RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy18058
(2301 letters)
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 524 bits (1350), Expect = e-163
Identities = 249/739 (33%), Positives = 399/739 (53%), Gaps = 30/739 (4%)
Query: 46 LADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGK 105
L E Q+KTF W NSHL + +I ++ D RDG L+ LLEV+SGERL +P +GK
Sbjct: 1 LDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGK 60
Query: 106 MRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEET 165
MR+H + NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQDI++EET
Sbjct: 61 MRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEET 120
Query: 166 DNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSK 225
K+ LLLW Q KTA Y NVN++NF SW+DGL F A+IH+HRP+LI + KL K
Sbjct: 121 SA------KEGLLLWYQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRK 174
Query: 226 SNAIYNLNNAFTVAEDKLGLTKLLDAED-IFVEQPDEKSIITYVVTYYHYFSKMKQETVQ 284
+ + NLN AF VAE L + K+LDAED + +PDEK+I+TYV ++YH FS ++
Sbjct: 175 DDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETA 234
Query: 285 GKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNN 344
RI KV+ + +N++++ +YE L SDLL WI+ TI L +R N++ +QQ+L F +
Sbjct: 235 ANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRD 294
Query: 345 YRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHER 404
YR + KPPK EK LE+ TLQ+K+R +N+ + P EGKM+SDIN AW LE+AE
Sbjct: 295 YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGY 354
Query: 405 ELALREELIRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNF-GFDLGAVEAAAKKHE 463
E L E+ R E+L+ LA +F +KAS+ E+W + ++ Q ++ L ++A KKHE
Sbjct: 355 EEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHE 414
Query: 464 AIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLE 523
A E+D+ A+++RV+ + ++QEL Y+D +NAR + + W+ L L + RR LE
Sbjct: 415 AFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALE 474
Query: 524 SSLQLQQSFQEMLY--------ILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADI 575
+ +L ++ ++ + ME L + ++ L H +A +
Sbjct: 475 RTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATL 534
Query: 576 NVLGERVKSVVQQSQRF--------LDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLA 627
+ ++++ ++ + P I + + + +
Sbjct: 535 PDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQAL 594
Query: 628 VERRARLEESRKLWQLYWDMADE-ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDE 686
+E AR +++ +L + + A+ WI+ K + + I T+ L+ + E
Sbjct: 595 MEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHG-TLEDQLNHLRQYEKS 653
Query: 687 IQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDF 746
I ++ ++ + ++ F ++ W+ LL A +E +
Sbjct: 654 IVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQI-- 711
Query: 747 HQFFADAVDVDIWMLDTVR 765
DA + ++ R
Sbjct: 712 --LTRDAKGISQEQMNEFR 728
Score = 120 bits (302), Expect = 2e-27
Identities = 75/511 (14%), Positives = 166/511 (32%), Gaps = 43/511 (8%)
Query: 365 FTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAAR 424
+ + QK T ++E+ + E IR+
Sbjct: 218 VSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRA 277
Query: 425 FNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQ 484
+ L + + + ++ +E + + +++ +
Sbjct: 278 PENTMQAMQQKLEDFRD--------YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAF 329
Query: 485 ELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSMEE 544
K IN + + E L RLE L + F++ I +S +
Sbjct: 330 MPSEGKMVSD--INNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTD 387
Query: 545 LKMRLLSDD--YGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFR 602
K +L L ++ LL+KH E+D+ +RV+ + +Q +
Sbjct: 388 GKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNEL------D 441
Query: 603 PCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDM--------ADEENWI 654
D + R Q++ D + L L +RR LE + KL + + A NW+
Sbjct: 442 YYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWM 501
Query: 655 KEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADR 714
+ + + I H + I L + H+ + + + + +++ + +E+
Sbjct: 502 EGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVN 561
Query: 715 IRG-------RLQDTMAMWQNLLDLAAFRRKRLEEAVD--------FHQFFADAVDVDIW 759
+ G Q+ W+++ L R + L E QF A A + W
Sbjct: 562 MAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPW 621
Query: 760 MLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESP 818
+ + + + ++ L + + + NY I+ L Q+ + ++
Sbjct: 622 IQTKMEEIGRISIEMHG-TLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNK 680
Query: 819 EVLERLASIEFRYKELLELAKLRKQRLLDAL 849
+ I +++LL + + +
Sbjct: 681 HTNYTMEHIRVGWEQLLTTIARTINEVENQI 711
Score = 117 bits (293), Expect = 2e-26
Identities = 66/545 (12%), Positives = 176/545 (32%), Gaps = 42/545 (7%)
Query: 822 ERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDI 881
+ + + K+ + + A + +WI L P +
Sbjct: 223 HAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTM 282
Query: 882 EDVEIMKHRYDGFDKEMNANASR-----VAVVNQLARQLLHVEHPN-SEQIVTRQNQLNH 935
+ ++ + + + + N L +L P + +N+
Sbjct: 283 QAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINN 342
Query: 936 DWAGLREKAEGKRDELNSA--------HGVQTFHIECRETVSWIEDKKRILQSTDSLEMD 987
W GL + +G + L + H + F + SW + K+ +LQ D
Sbjct: 343 AWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETAT 402
Query: 988 LTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQL 1047
L+ I L ++ E DLAA Q +++ + A A + + ++ ++ R ++I W+ L
Sbjct: 403 LSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNL 462
Query: 1048 TQMLKERDAKLEEAGDLHR--------FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEK 1099
+ ++R LE L + + F W+ D+ ++ + +
Sbjct: 463 GALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQG 522
Query: 1100 LLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDD---PQYMFLRERLKALRDGWEE 1156
L H+ + + + ++ + ++ +V+ T+ + + + WE
Sbjct: 523 LTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEH 582
Query: 1157 LHKMWENRQQLLSQSL--------NLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVE 1208
+ ++ R Q L + + F A + + + + ++ +E
Sbjct: 583 VRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGT-LE 641
Query: 1209 NLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAH 1268
+ + + ++ KI+ + ++ + + ++I
Sbjct: 642 DQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIA 701
Query: 1269 QQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIAS 1328
+ + +++Q+ +E + ++ + + F A + S
Sbjct: 702 RTINEVENQILTRDAKGISQEQMNEFR--------ASFNHFDRKKTGMMDCEDFRACLIS 753
Query: 1329 NKDRL 1333
+
Sbjct: 754 MGYNM 758
Score = 108 bits (269), Expect = 2e-23
Identities = 65/497 (13%), Positives = 154/497 (30%), Gaps = 38/497 (7%)
Query: 1451 KTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLP 1510
K + + S ++ E ++ + + D WI +P
Sbjct: 212 KAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIP 271
Query: 1511 SAKSTEYGNSLFNVHML----KKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDS--A 1564
++ N++ + + + + ++ + N + + + +
Sbjct: 272 WLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMP 331
Query: 1565 EFTSLIEDLMDRWQQLKKAVDERRSKLIQS--------EKAQQYLFDASEAESWMSEQEL 1616
++ D+ + W L++A L+ A+++ AS ESW +E
Sbjct: 332 SEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEA 391
Query: 1617 YMMVED-RGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALK 1675
+ +D + L+KKHE E + + D + Q+ A++L + +S + +
Sbjct: 392 MLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNAR 451
Query: 1676 QSQVDKLYAGLKDLAGERRAKLDEALKLF--------MLNREVDDLEQWIAEREVVAGSH 1727
++ + L L +RR L+ KL + W+
Sbjct: 452 CQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDT 511
Query: 1728 ELGQDYDHVTLLWERFKEFDRDTEAIGTERVAA------VNGIADQLIAAGHSDSATIAE 1781
+ + + L ++F ER A V+ I +
Sbjct: 512 FIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTI 571
Query: 1782 WKDGLNEAWQDLLELIETRTQMLVAS--------RELHKFFHDCKDILGRISEKHHAMSD 1833
+N W+ + +L+ R Q L+ R +F I I K +
Sbjct: 572 TPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGR 631
Query: 1834 ELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVV 1893
G++ + + + + + ++ Q+ + ++Q + + K +
Sbjct: 632 ISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFD-NKHTNYTMEHIR 690
Query: 1894 NAWASLQNACDARKQKL 1910
W L ++
Sbjct: 691 VGWEQLLTTIARTINEV 707
Score = 103 bits (256), Expect = 6e-22
Identities = 60/505 (11%), Positives = 163/505 (32%), Gaps = 40/505 (7%)
Query: 1141 MFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDET 1200
+ +++ + ++ + + A + + L
Sbjct: 219 SSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAP 278
Query: 1201 PVNLEQVENLIKRHEAFLTTME-------ANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
++ ++ ++ + + + +Q RL++ + + K +
Sbjct: 279 ENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVS 338
Query: 1254 D---NINDRRNANKERAHQQMETLKDQLQLHQ----FLQDCEELGEWVQEKKFTAQDETY 1306
D A K + ++ +L F Q W K+ Q + Y
Sbjct: 339 DINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDY 398
Query: 1307 RSAK--TVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQ 1364
+A + + +H+AFE+++A+++DR+ ++ EL + + + + + Q
Sbjct: 399 ETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQ 458
Query: 1365 FDDLETTTKDKGERLFDSNR--------EVLIHQTCDDIDSWMNELEKQIENEDTGSDLA 1416
+D+L T+ + E L + + + + ++WM + +++ +
Sbjct: 459 WDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIE 518
Query: 1417 SVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTV--------------PDKMEEIVV 1462
+ L + + + K+ + + K V +EI
Sbjct: 519 EIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEING 578
Query: 1463 KKSAVEQRFEKIKEPLLARQRALEKKKEAY-QFRRDIEDEKLWIAEKLPSAKSTEYGNSL 1521
K V Q + + L+ ++ + QF WI K+
Sbjct: 579 KWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHG 638
Query: 1522 FNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLK 1581
+ + K I N++P+I+ + + +++ + D+ +E + W+QL
Sbjct: 639 -TLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLL 697
Query: 1582 KAVDERRSKLIQSEKAQQYLFDASE 1606
+ +++ + + E
Sbjct: 698 TTIARTINEVENQILTRDAKGISQE 722
Score = 92.7 bits (229), Expect = 8e-19
Identities = 39/248 (15%), Positives = 91/248 (36%), Gaps = 4/248 (1%)
Query: 299 DRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKG 358
D++ EY + W++ + L D +++ +Q ++ P E+
Sbjct: 484 DQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKA-TLPDADKERQ 542
Query: 359 NLEVLLFTLQSKMRANNQ--KPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQE 416
+ + + ++ + P +IN WE + + R+ AL EE RQ+
Sbjct: 543 AILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQ 602
Query: 417 KLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERV 476
+ E+L +F +A++ W+ + + + G +E E I Y+ ++
Sbjct: 603 QNERLRKQFGAQANVIGPWIQTKMEEIGRISIE-MHGTLEDQLNHLRQYEKSIVNYKPKI 661
Query: 477 QAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEML 536
+ Q+++ D N E++ W LL + +E+ + + +
Sbjct: 662 DQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQ 721
Query: 537 YILDSMEE 544
++
Sbjct: 722 EQMNEFRA 729
Score = 90.7 bits (224), Expect = 3e-18
Identities = 60/440 (13%), Positives = 132/440 (30%), Gaps = 41/440 (9%)
Query: 1707 NREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIAD 1766
+ DL +WI + + E F+++ R + + + +
Sbjct: 256 EKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFN 315
Query: 1767 QLIAAGHSDSATIAEWKDG-----LNEAWQDLLELIETRTQMLVASRE--------LHKF 1813
L + +G +N AW L + + + L+ KF
Sbjct: 316 TLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKF 375
Query: 1814 FHDCKDILGRISEKHHAMSDE--LGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESA 1871
K + + + L +KH+ F DL Q +V+QI +
Sbjct: 376 RQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQ 435
Query: 1872 KLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK--------FLIMV 1923
+L + + R ++ + W +L R++ L T L + +
Sbjct: 436 ELNEL-DYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRA 494
Query: 1924 RTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSR 1983
WM+ + + + + ++ L H+ KA + + A + + E+
Sbjct: 495 APFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKI 554
Query: 1984 NHYASNEIKEKLVGLSNQRNALLHRW---------------EERWENLQLILEVYQFARD 2028
+ + + +W EE Q QF
Sbjct: 555 VQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQ 614
Query: 2029 AAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELK 2088
A V W+ + + + + + +E+ + +EKS + + + LE +++
Sbjct: 615 ANVIGPWIQTKMEEIGRISIEMHGT-LEDQLNHLRQYEKSIVNYKPKIDQLEGDHQ-QIQ 672
Query: 2089 ELNKRKEEEERKRQEELAAK 2108
E + E +
Sbjct: 673 EALIFDNKHTNYTMEHIRVG 692
Score = 74.2 bits (181), Expect = 3e-13
Identities = 57/414 (13%), Positives = 137/414 (33%), Gaps = 31/414 (7%)
Query: 1781 EWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSDELGRDAG 1840
G +A + + + + + D+L I + +
Sbjct: 223 HAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR--APEN 280
Query: 1841 SVNTLQRKHQNFLQDLQTL--------QSQVQQICNESAKLQASYAGEKAKEITNREAEV 1892
++ +Q+K ++F + KL+ S +++
Sbjct: 281 TMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDI 340
Query: 1893 VNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLW-MDDVVRQMNTSEKA-------- 1943
NAW L+ A ++ L + + L + + E
Sbjct: 341 NNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYET 400
Query: 1944 RDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRN 2003
+S ++ L+ H++ ++++ +D ++ +EL ++Y S + + + +Q +
Sbjct: 401 ATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWD 460
Query: 2004 ALLHRWEERWENLQLILEVYQ--------FARDAAVAEAWLIAQEPYLMSMELGLTIDEV 2055
L ++R E L+ ++ + +A+ AA W+ L + TI+E+
Sbjct: 461 NLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEI 520
Query: 2056 ENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQTPPTSP 2115
+ L HE F+ + ++ A+ + E++K + P
Sbjct: 521 QGLTTAHEQFKATLPDADKERQAILGIH----NEVSKIVQTYHVNMAGTNPYTTITPQEI 576
Query: 2116 DQSAKDRLDGEEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKHEWEA 2169
+ + +D+ E +++Q R GA A+ + + K E
Sbjct: 577 NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIG 630
>1wku_A Alpha-actinin 3; calponin homology domain, actin binding domain,
contractIle protein; 1.60A {Homo sapiens} PDB: 1tjt_A
2r0o_A 2eyi_A 2eyn_A 3lue_K
Length = 254
Score = 330 bits (847), Expect = e-103
Identities = 132/248 (53%), Positives = 170/248 (68%), Gaps = 7/248 (2%)
Query: 39 ERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERL 98
+ R L E Q+KTF W NSHL + +I ++ D R+G L+ LLEV+SGERL
Sbjct: 13 DWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLMLLLEVISGERL 72
Query: 99 PRPTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQ 158
PRP KGKMR H + NV+KAL F+ + V L ++G+ +IVDGN +++LG+IWTIILRF IQ
Sbjct: 73 PRPDKGKMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQ 132
Query: 159 DITIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLI 218
DI++EE SAK+ LLLWCQ KTA Y NVNV+NF TSW+DGLA A+IH+HRPDLI
Sbjct: 133 DISVEE------TSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLI 186
Query: 219 QFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSK 277
+ KL K + I NLN AF VAE L + K+LDAEDI +PDEK+I+TYV +YH F+
Sbjct: 187 DYAKLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAFAG 246
Query: 278 MKQETVQG 285
+Q
Sbjct: 247 AEQAETAA 254
>3f7p_A Plectin-1; plakin, hemidesmosome, cell adhesion, epidermolysis
bullosa, actin-binding, alternative splicing, coiled
coil, cytoplasm; 2.75A {Homo sapiens}
Length = 296
Score = 321 bits (824), Expect = 1e-99
Identities = 135/271 (49%), Positives = 172/271 (63%), Gaps = 7/271 (2%)
Query: 8 ARWDLTLPQTGQQEPIEDYEYDGGNSSSRLFERSRIKALADERESVQKKTFQKWVNSHLV 67
W+L Q ++ G N S + +ADER+ VQKKTF KWVN HL+
Sbjct: 32 LPWNLGKTQRSRRSG----GGAGSNGSVLDPAERAVIRIADERDRVQKKTFTKWVNKHLI 87
Query: 68 RVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRVH 127
+ I DLY DLRDG L+ LLEVLSG+ LPR KG+MR H L+NV AL +LR ++V
Sbjct: 88 KAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR-EKGRMRFHKLQNVQIALDYLRHRQVK 146
Query: 128 LENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMKTAG 187
L N+ + DI DGNP+L+LGLIWTIIL FQI DI + E +AK+ LLLW Q G
Sbjct: 147 LVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVS--GQSEDMTAKEKLLLWSQRMVEG 204
Query: 188 YHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTK 247
Y + NFT+SWRDG FNAIIH+H+P LI K+ + + NL+ AF+VAE LG+T+
Sbjct: 205 YQGLRCDNFTSSWRDGRLFNAIIHRHKPLLIDMNKVYRQTNLENLDQAFSVAERDLGVTR 264
Query: 248 LLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
LLD ED+ V QPDEKSIITYV + Y ++
Sbjct: 265 LLDPEDVDVPQPDEKSIITYVSSLYDAMPRV 295
>1sh5_A Plectin 1, PLTN, PCN; actin-binding domain, calponin-homology
domain, structural protein; 2.00A {Mus musculus} SCOP:
a.40.1.1 a.40.1.1 PDB: 1sh6_A 1mb8_A
Length = 245
Score = 314 bits (806), Expect = 6e-98
Identities = 129/239 (53%), Positives = 160/239 (66%), Gaps = 8/239 (3%)
Query: 48 DERESVQKKTFQKWVNSHLVR-----VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT 102
DER+ VQKKTF KWVN HL++ I DLY DLRDG L+ LLEVLSG+ LPR
Sbjct: 7 DERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPR-E 65
Query: 103 KGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITI 162
KG+MR H L+NV AL +LR ++V L N+ + DI DGNP+L+LGLIWTIIL FQI DI +
Sbjct: 66 KGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQV 125
Query: 163 EETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEK 222
E +AK+ LLLW Q GY + NFTTSWRDG FNAIIH+H+P LI K
Sbjct: 126 S--GQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNK 183
Query: 223 LSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQE 281
+ + + NL+ AF+VAE LG+T+LLD ED+ V QPDEKSIITYV + Y ++
Sbjct: 184 VYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRVPGA 242
>1dxx_A Dystrophin; structural protein, muscular dystrophy, calponin
homology domain, actin-binding, utrophin; 2.6A {Homo
sapiens} SCOP: a.40.1.1 a.40.1.1 PDB: 1qag_A
Length = 246
Score = 302 bits (774), Expect = 1e-93
Identities = 107/238 (44%), Positives = 150/238 (63%), Gaps = 3/238 (1%)
Query: 45 ALADERESVQKKTFQKWVNSHLV-RVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTK 103
+ ERE VQKKTF KWVN+ I +L+ DL+DG+ LL LLE L+G++LP+ K
Sbjct: 8 EDSYEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPK-EK 66
Query: 104 GKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIE 163
G R+H L NV+KAL+ L+ V L N+GS DIVDGN +L+LGLIW IIL +Q++++
Sbjct: 67 GSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKN 126
Query: 164 ETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEK- 222
+ +++ LL W + T Y VNV NFTTSW DGLA NA+IH HRPDL +
Sbjct: 127 IMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSV 186
Query: 223 LSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQ 280
+S+ +A L +AF +A +LG+ KLLD ED+ PD+KSI+ Y+ + + +
Sbjct: 187 VSQQSATQRLEHAFNIARYQLGIEKLLDPEDVDTTYPDKKSILMYITSLFQVLPQQVS 244
>3hoc_A Filamin-A; calponin homology domain, actin binding domain,
acetylation, actin-binding, alternative splicing,
cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB:
3hop_A 3hor_A 2wfn_A
Length = 272
Score = 282 bits (723), Expect = 2e-86
Identities = 81/248 (32%), Positives = 127/248 (51%), Gaps = 8/248 (3%)
Query: 32 NSSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLE 91
+ + + A + +Q+ TF +W N HL VS RI +L DL DG L+ LLE
Sbjct: 26 TRDAEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSKRIANLQTDLSDGLRLIALLE 85
Query: 92 VLSGERLPRP--TKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIW 149
VLS +++ R + R LENV AL+FL + + L ++ S IVDGN +L LGLIW
Sbjct: 86 VLSQKKMHRKHNQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLIW 145
Query: 150 TIILRFQIQDITIEETDNQETK--SAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFN 207
T+IL + I +E +++E K + K LL W Q K + + NF+ W+ G A
Sbjct: 146 TLILHYSISMPMWDEEEDEEAKKQTPKQRLLGWIQNK---LPQLPITNFSRDWQSGRALG 202
Query: 208 AIIHKHRPDLIQ-FEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIIT 266
A++ P L ++ S + N A A+D LG+ +++ E+I D+ S++T
Sbjct: 203 ALVDSCAPGLCPDWDSWDASKPVTNAREAMQQADDWLGIPQVITPEEIVDPNVDKHSVMT 262
Query: 267 YVVTYYHY 274
Y+ +
Sbjct: 263 YLSQFPKA 270
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural
protein, actin-crosslinking, myogenesis, cytoskeleton;
1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Length = 245
Score = 278 bits (711), Expect = 3e-85
Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 42 RIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP 101
+ A + +Q+ TF +W N HL V+ RIG+L DL DG L+ LLEVLS +R+ R
Sbjct: 9 KDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRK 68
Query: 102 --TKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQD 159
+ R LENV AL+FL + + L ++ S IVDGN +L LGL+WT+IL + I
Sbjct: 69 YHQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISM 128
Query: 160 I--TIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDL 217
E D+ + ++ K LL W Q K + + NF +W+DG A A++ P L
Sbjct: 129 PVWEDEGDDDAKKQTPKQRLLGWIQNK---IPYLPITNFNQNWQDGKALGALVDSCAPGL 185
Query: 218 IQ-FEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHY 274
+E + N A A+D LG+ +++ E+I DE S++TY+ +
Sbjct: 186 CPDWESWDPQKPVDNAREAVQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKA 243
>1aoa_A T-fimbrin; actin-binding protein, calcium-binding, phosphorylation;
2.40A {Homo sapiens} SCOP: a.40.1.1 a.40.1.1
Length = 275
Score = 267 bits (685), Expect = 3e-81
Identities = 49/267 (18%), Positives = 97/267 (36%), Gaps = 37/267 (13%)
Query: 41 SRIKALADERESVQKKTFQKWVNSHL---------VRVSCRIGDLYVDLRDGKMLLKLLE 91
+ +K F W+N L + ++ DL+ + DG +L K++
Sbjct: 12 LSSEGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMIN 71
Query: 92 VLSGERLPRPT---KGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLI 148
+ + + K EN++ AL H+ N+G+ D+ G P L LGL+
Sbjct: 72 LSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLL 131
Query: 149 WTIILRFQIQDITI-------------EETDNQETKSAKDALLLWCQMKTAGYHNVNVRN 195
W II DI + E + S ++ LL W + N
Sbjct: 132 WQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQKINN 191
Query: 196 FTTSWRDGLAFNAIIHKHRPDL---------IQFEKLSKSNAIYNLNNAFTVAEDKLGLT 246
F+ +D A+ ++++ P I ++++ + + A+ KLG
Sbjct: 192 FSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQAD-KLGCR 250
Query: 247 KLLDAEDIFVEQPDEKSIITYVVTYYH 273
+ + D+ + K + +V ++
Sbjct: 251 QFVTPADVVS--GNPKLNLAFVANLFN 275
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin,
spectrin repeat, three helix bundle, ANKY binding,
disease mutation, structural protein, ZU5 sandwich; 2.75A
{Homo sapiens} PDB: 3kbu_A
Length = 326
Score = 260 bits (666), Expect = 5e-78
Identities = 168/325 (51%), Positives = 225/325 (69%)
Query: 1593 QSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIR 1652
+ +AQQY DA EAE+W+ EQELY++ ++ KDE ++K+H + AVEDY I+
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 1653 QLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDD 1712
QL A+ L S HPE +QI Q QVDK YAGLKD+A ER+ KL+ LF L RE DD
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 1713 LEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAG 1772
LEQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG ERV VN ++LI AG
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 1773 HSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMS 1832
HS++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+ +ILG I EKH +
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 241
Query: 1833 DELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEV 1892
+++G DA + + R H F +D+ L QVQQ + + +LQ +YAGEKA+ I N+E EV
Sbjct: 242 EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEV 301
Query: 1893 VNAWASLQNACDARKQKLGDTGDLF 1917
AW +L +AC R+ +L DT D F
Sbjct: 302 SAAWQALLDACAGRRTQLVDTADKF 326
Score = 178 bits (453), Expect = 2e-49
Identities = 71/332 (21%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 524 SSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVK 583
++ + QQ + + + E ++ ++SD+ K G +L++H + + G +K
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 584 SVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQL 643
+ ++Q L + I+ Q++ Y+ L +A ER+ +LE L+QL
Sbjct: 62 QLASRAQGLLSAG------HPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQL 115
Query: 644 YWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HESQLMSVIAVGD 702
+ D E WI EKE + S+ ++G D + LL K + E A + ++ +V A +
Sbjct: 116 KRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIE 175
Query: 703 ELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLD 762
L++ H A I MW +LL+L R + L + D H++F ++ + +
Sbjct: 176 RLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE 235
Query: 763 TVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQ--DKESPEV 820
R + EDVG D + +S + H ++ ++ ++ A++L +++ +
Sbjct: 236 KHREL-PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAI 294
Query: 821 LERLASIEFRYKELLELAKLRKQRLLDALSLY 852
+ + ++ LL+ R+ +L+D +
Sbjct: 295 QNKEQEVSAAWQALLDACAGRRTQLVDTADKF 326
Score = 174 bits (443), Expect = 4e-48
Identities = 67/323 (20%), Positives = 134/323 (41%), Gaps = 4/323 (1%)
Query: 636 ESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLM 695
+ + Q Y D + E WI E+E V + +I D ++L +H + ++ + +
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 696 SVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVD 755
+ + L++ H ++I + L D+A R+++LE Q + D
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 756 VDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYAST-IEALRNQASQLGDQD 814
++ W+ + + SS ++G+D +V L K +D E ++ + +L D
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 815 -KESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLA 873
E+ + E + + +LLEL R Q L + L++ F + I EK R L
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELP 241
Query: 874 TMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPN-SEQIVTRQNQ 932
V G D E + F+++++ +V +A +L +E I ++ +
Sbjct: 242 EDV-GLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQE 300
Query: 933 LNHDWAGLREKAEGKRDELNSAH 955
++ W L + G+R +L
Sbjct: 301 VSAAWQALLDACAGRRTQLVDTA 323
Score = 174 bits (441), Expect = 9e-48
Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 9/327 (2%)
Query: 422 AARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVT 481
A ++ A E W+ E + V D D K+H + + Y ++ + +
Sbjct: 6 AQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLAS 65
Query: 482 VSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDS 541
+Q L + + + ++I + V + + L ++ + R+ +LE+ L Q +E +
Sbjct: 66 RAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQW 125
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGE-RVKSVVQQSQRFLDEETNEG 600
+ E ++ S + G+ V L K + +G+ RV +V +R +D
Sbjct: 126 ISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG---- 181
Query: 601 FRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQI 660
+ A I E L + +++L++L R L S L + ++ A+ I EK +
Sbjct: 182 --HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRE 239
Query: 661 VSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHF-GADRIRGRL 719
+ D+G D +T H A E ++ Q+ V L A+ I+ +
Sbjct: 240 LPE-DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKE 298
Query: 720 QDTMAMWQNLLDLAAFRRKRLEEAVDF 746
Q+ A WQ LLD A RR +L + D
Sbjct: 299 QEVSAAWQALLDACAGRRTQLVDTADK 325
Score = 170 bits (431), Expect = 2e-46
Identities = 63/328 (19%), Positives = 129/328 (39%), Gaps = 6/328 (1%)
Query: 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYK 1119
A + ++ D D + W+ + + V S++ P A +L +H + +++Y + K
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 1120 KMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNR 1179
++ + + + P+ + + + L + E R++ L +L R
Sbjct: 62 QLASRAQGLLSA----GHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKR 117
Query: 1180 DAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEA-NDDKINGVVQFADRL 1238
+ E +S++E V S E + + V L + F A ++++ V F +RL
Sbjct: 118 ETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERL 177
Query: 1239 NDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKK 1298
D H A + + D +N+ E +M+ L LH++ E+ + EK
Sbjct: 178 IDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKH 237
Query: 1299 FTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKP-ELAELIGPK 1357
++ A T S H AFE ++ ++ + Q + L E AE I K
Sbjct: 238 RELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNK 297
Query: 1358 ISDLGQQFDDLETTTKDKGERLFDSNRE 1385
++ + L + +L D+ +
Sbjct: 298 EQEVSAAWQALLDACAGRRTQLVDTADK 325
Score = 166 bits (422), Expect = 3e-45
Identities = 69/318 (21%), Positives = 145/318 (45%), Gaps = 3/318 (0%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEI 1448
+ D+ ++W+ E E + +++ D +++++ + + + + +L ++A+
Sbjct: 10 YLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQG 69
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEK 1508
L + E+I+ + V++ + +K+ R+R LE +Q +R+ +D + WI+EK
Sbjct: 70 LLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLEQWISEK 129
Query: 1509 LPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HEPRINLICNNGRKLIDEGHEDSAEFT 1567
A S E G +V +L+ K + A+E + R++ + +LID GH ++A
Sbjct: 130 ELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIA 189
Query: 1568 SLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDE 1627
+ L + W L + +D R L S +Y + +E + E+ + ED G D
Sbjct: 190 EWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHR-ELPEDVGLDA 248
Query: 1628 ISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPE-SDQIALKQSQVDKLYAGL 1686
+ ++ + H E V ++Q + A +L + E ++ I K+ +V + L
Sbjct: 249 STAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQAL 308
Query: 1687 KDLAGERRAKLDEALKLF 1704
D RR +L + F
Sbjct: 309 LDACAGRRTQLVDTADKF 326
Score = 165 bits (419), Expect = 8e-45
Identities = 65/324 (20%), Positives = 125/324 (38%), Gaps = 4/324 (1%)
Query: 1489 KEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLI 1548
EA Q+ D ++ + WI E+ S E ++ K++ + ++++ I +
Sbjct: 4 NEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQL 63
Query: 1549 CNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAE 1608
+ + L+ GH + + L + + LK +ER+ KL Q + + E
Sbjct: 64 ASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDDLE 123
Query: 1609 SWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYA-DTIRQLGETARQLTSEMHP 1667
W+SE+EL + G+D L K + + + +L H
Sbjct: 124 QWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS 183
Query: 1668 ESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSH 1727
E+ IA + +++++A L +L R L + L ++ I E+
Sbjct: 184 EAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL-PE 242
Query: 1728 ELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSA-TIAEWKDGL 1786
++G D F+RD +G +V +A +L A + A I + +
Sbjct: 243 DVGLDASTAESFHRVHTAFERDVHLLG-VQVQQFQDVATRLQTAYAGEKAEAIQNKEQEV 301
Query: 1787 NEAWQDLLELIETRTQMLVASREL 1810
+ AWQ LL+ R LV + +
Sbjct: 302 SAAWQALLDACAGRRTQLVDTADK 325
Score = 152 bits (384), Expect = 3e-40
Identities = 63/329 (19%), Positives = 134/329 (40%), Gaps = 6/329 (1%)
Query: 847 DALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVA 906
+A + + +AD + WIGE++ + + KD E +M R+ + + +
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIK 61
Query: 907 VVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRE 966
+ A+ LL HP EQI+ Q Q++ +AGL++ AE ++ +L + + + E +
Sbjct: 62 QLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 967 TVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQ-AKLDSLEAEAVAIEKE 1025
WI +K+ + S + + D + L+ + R+ AI ++D++ A +
Sbjct: 122 LEQWISEKELVASSPEMGQ-DFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDA 180
Query: 1026 HPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDV 1085
EA I E + +W L +++ R L + DLHR+ + + ++
Sbjct: 181 GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL 240
Query: 1086 ASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRE 1145
ED + AE H A ++ ++ D ++ + ++
Sbjct: 241 -PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEA---IQN 296
Query: 1146 RLKALRDGWEELHKMWENRQQLLSQSLNL 1174
+ + + W+ L R+ L + +
Sbjct: 297 KEQEVSAAWQALLDACAGRRTQLVDTADK 325
Score = 145 bits (367), Expect = 5e-38
Identities = 65/321 (20%), Positives = 125/321 (38%), Gaps = 4/321 (1%)
Query: 1169 SQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKI 1228
S + Q + DA +AE + +QE + DE P + E ++KRH +E I
Sbjct: 1 SNANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNI 60
Query: 1229 NGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCE 1288
+ A L H +++ + ++ K+ A ++ L++ L Q ++ +
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETD 120
Query: 1289 ELGEWVQEKKFTAQD-ETYRSAKTVHSKWTRHQAFEAEI-ASNKDRLLRVQQSGSELMKE 1346
+L +W+ EK+ A E + V + + F E A ++R+ V L+
Sbjct: 121 DLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDA 180
Query: 1347 KPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQI 1406
A I L + + DL + + L S T +I ++E +++
Sbjct: 181 GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL 240
Query: 1407 ENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVP-DKMEEIVVKKS 1465
ED G D ++ + E + + QV + + A LQ +K E I K+
Sbjct: 241 -PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQ 299
Query: 1466 AVEQRFEKIKEPLLARQRALE 1486
V ++ + + R+ L
Sbjct: 300 EVSAAWQALLDACAGRRTQLV 320
Score = 144 bits (365), Expect = 1e-37
Identities = 54/331 (16%), Positives = 128/331 (38%), Gaps = 8/331 (2%)
Query: 952 NSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAK 1011
++A+ Q ++++ E +WI +++ + S + + D G + + +R +R +
Sbjct: 1 SNANEAQQYYLDADEAEAWIGEQELYVISDEIPK-DEEGAIVMLKRHLRQQRAVEDYGRN 59
Query: 1012 LDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDL 1071
+ L + A + E E I Q+ + L + +ER KLE L + R+
Sbjct: 60 IKQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRET 119
Query: 1072 DHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTED-YKKMMDYGEKVTA 1130
D + W+++ + +S + L ++ + E ++ + + E++
Sbjct: 120 DDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLID 179
Query: 1131 EPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQ 1190
+ + E L + W +L ++ + R QLL+ S +L + + L+ +
Sbjct: 180 AGHSEAAT----IAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE 235
Query: 1191 QEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHY-AADKV 1249
+ L ++ ++ E+ + H AF + ++ A RL A+ +
Sbjct: 236 KHRELP-EDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAI 294
Query: 1250 KKKADNINDRRNANKERAHQQMETLKDQLQL 1280
+ K ++ A + + L D
Sbjct: 295 QNKEQEVSAAWQALLDACAGRRTQLVDTADK 325
Score = 140 bits (353), Expect = 4e-36
Identities = 54/304 (17%), Positives = 125/304 (41%), Gaps = 4/304 (1%)
Query: 1807 SRELHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQ 1865
+ E +++ D + I E+ + +SDE+ +D + ++H + ++ ++Q
Sbjct: 3 ANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQ 62
Query: 1866 ICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRT 1925
+ + + L ++ E ++I + +V +A L++ + RK+KL + LF+
Sbjct: 63 LASRAQGLLSAGHPE-GEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETDD 121
Query: 1926 LMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDT-REDNFTACISLGKELLSRN 1984
L W+ + ++ E +D V LL + + E ++ + + L+
Sbjct: 122 LEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG 181
Query: 1985 HYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM 2044
H + I E GL+ LL + R + L +++++ A + + L
Sbjct: 182 HSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL- 240
Query: 2045 SMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEE 2104
++GL E+ + H AFE+ + + + T K E + +++E
Sbjct: 241 PEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQE 300
Query: 2105 LAAK 2108
++A
Sbjct: 301 VSAA 304
Score = 135 bits (340), Expect = 2e-34
Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 4/327 (1%)
Query: 1699 EALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERV 1758
A + + D+ E WI E+E+ S E+ +D + ++ +R R E G +
Sbjct: 2 NANEAQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYG-RNI 60
Query: 1759 AAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCK 1818
+ A L++AGH + I + +++ + L ++ E R + L L + +
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRETD 120
Query: 1819 DILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASY 1877
D+ ISEK A S E+G+D V L+ K ++F ++ + + N +
Sbjct: 121 DLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDA 180
Query: 1878 AGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQM 1937
+A I + + WA L D R Q L + DL ++ ++ +D+ R++
Sbjct: 181 GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDEKHREL 240
Query: 1938 NTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHY-ASNEIKEKLV 1996
+ D S E H + + ++ + L + + I+ K
Sbjct: 241 PE-DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQ 299
Query: 1997 GLSNQRNALLHRWEERWENLQLILEVY 2023
+S ALL R L + +
Sbjct: 300 EVSAAWQALLDACAGRRTQLVDTADKF 326
Score = 115 bits (288), Expect = 1e-27
Identities = 66/339 (19%), Positives = 121/339 (35%), Gaps = 21/339 (6%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
+Y + WI E + + G L + + + VE +
Sbjct: 7 QQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQ------RAVEDYGRNI 60
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
+++ + P + ++ ++K + L+ ER+ L +
Sbjct: 61 KQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQ------ 114
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAY-EERVQAVVT 481
R+ E W+SE + + S G D V K + A +ERV V
Sbjct: 115 --LKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 172
Query: 482 VSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDS 541
+ L + + I K+ + +W LLEL+ R L +S L + F IL
Sbjct: 173 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGL 232
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
++E K R L +D G E + H+ E D+++LG +V+ + R E
Sbjct: 233 IDE-KHRELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGE-- 289
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKL 640
I + Q++ A+ L+ RR +L ++
Sbjct: 290 ---KAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 325
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein,
muscle, Z- LINE, actin-binding protein; 2.8A {Homo
sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Length = 476
Score = 262 bits (670), Expect = 1e-76
Identities = 123/470 (26%), Positives = 209/470 (44%), Gaps = 19/470 (4%)
Query: 293 GIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPP 352
+ +N+R++ EYE L S+LL WI+ TI L +R ++ +Q++L F +YR KPP
Sbjct: 4 AVNQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPP 63
Query: 353 KFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREEL 412
K EK LE+ TLQ+K+R +N+ + P EGKM+SDI AW+RLE+AE E L E+
Sbjct: 64 KVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEI 123
Query: 413 IRQEKLEQLAARFNRKASMRETWLSEN-QRLVSQDNFGFDLGAVEAAAKKHEAIETDIFA 471
R E+LE LA +F +KAS ETW Q L+ +D L V A +KHEA E+D+ A
Sbjct: 124 RRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAA 183
Query: 472 YEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQS 531
+++RV+ + ++QEL YHD +N R + + W+ L L + RR LE +L ++
Sbjct: 184 HQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLET 243
Query: 532 FQEMLY--------ILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVK 583
++ + ME L + ++ L+ H +A + +
Sbjct: 244 IDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQ 303
Query: 584 SVVQQSQRFLDEETNEGFR-PCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLW- 641
S++ + R + +L + ++ +L R L+E
Sbjct: 304 SIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQH 363
Query: 642 -------QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQL 694
Q WI+ K + ++ I + +++ K E I +++ +
Sbjct: 364 ANERLRRQFAAQANAIGPWIQNKMEEIARSSIQ-ITGALEDQMNQLKQYEHNIINYKNNI 422
Query: 695 MSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAV 744
+ + F ++ W+ LL A +E +
Sbjct: 423 DKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQI 472
Score = 130 bits (326), Expect = 2e-31
Identities = 67/462 (14%), Positives = 156/462 (33%), Gaps = 35/462 (7%)
Query: 527 QLQQSFQEML-YILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSV 585
+L + ++ + +L+ + L + K + ++ L+ + K
Sbjct: 11 RLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQ 70
Query: 586 VQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK------ 639
++ + L + RP + V + A+ L + L +
Sbjct: 71 LEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLE 130
Query: 640 --LWQLYWDMADEENWIKEKEQIVSTGD-IGHDLTTINLLLSKHKALEDEIQAHESQLMS 696
+ + E W KEQI+ D LT + LL KH+A E ++ AH+ ++
Sbjct: 131 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 190
Query: 697 VIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQ-------- 748
+ A+ EL + A + R Q W L L RR+ LE +
Sbjct: 191 IAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLE 250
Query: 749 FFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQAS 808
F A + WM + + + +QSL+ H+ L +++ +
Sbjct: 251 FAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQN 310
Query: 809 QLGDQDKE--------SPEVLERLASIEFRYKELLELAKLRKQRLLDALS--------LY 852
++ + +P + + ++ ++ +L +R Q L + L+
Sbjct: 311 EVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRR 370
Query: 853 KLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLA 912
+ ++A+ + WI K +A + +E ++ ++ + + + +
Sbjct: 371 QFAAQANAIGPWIQNKMEEIAR-SSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDH 429
Query: 913 RQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSA 954
+ + +++ + W L +E+ +
Sbjct: 430 QLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQ 471
Score = 116 bits (292), Expect = 4e-27
Identities = 58/455 (12%), Positives = 150/455 (32%), Gaps = 38/455 (8%)
Query: 1493 QFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPR----INLI 1548
++ R + WI +P ++ ++ + + + ++ + + + +
Sbjct: 15 EYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEIN 74
Query: 1549 CNNGRKLIDEGHEDSAEFT--SLIEDLMDRWQQLKKAVDERRSKLIQSEK--------AQ 1598
N + + + + + ++ D+ WQ+L++A L+ + A+
Sbjct: 75 FNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAE 134
Query: 1599 QYLFDASEAESWMSEQELYMMVED-RGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
++ AS E+W +E ++ +D + L++KHE E + + D + Q+
Sbjct: 135 KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAI 194
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF--------MLNRE 1709
A++L + ++ + + ++ + L L +RR L+ KL +
Sbjct: 195 AQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKR 254
Query: 1710 VDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTER------VAAVNG 1763
W+ + + + L ++F ER V
Sbjct: 255 AAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEK 314
Query: 1764 IADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVAS--------RELHKFFH 1815
+ S + D L W + +L+ R Q L R +F
Sbjct: 315 VIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAA 374
Query: 1816 DCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQA 1875
I I K ++ + G++ + + + ++ ++ + ++ + +Q
Sbjct: 375 QANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQE 434
Query: 1876 SYAGEKAKEITNREAEVVNAWASLQNACDARKQKL 1910
+ + K + W L ++
Sbjct: 435 ALVFD-NKHTNYTMEHIRVGWELLLTTIARTINEV 468
Score = 115 bits (288), Expect = 1e-26
Identities = 66/456 (14%), Positives = 153/456 (33%), Gaps = 34/456 (7%)
Query: 857 EADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDK-------------EMNANAS 903
A + +WI L P K ++ ++ + + + E+N N
Sbjct: 19 LASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTL 78
Query: 904 RVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDEL-NSAHGVQTFHI 962
+ + + E I +L G E + L H + F
Sbjct: 79 QTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQ 138
Query: 963 ECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAI 1022
+ +W K++IL D LT + L R+ E DLAA Q +++ + A A +
Sbjct: 139 KASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQEL 198
Query: 1023 EKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHR--------FLRDLDHF 1074
+ +A + +R ++I W++L + ++R LE L F + F
Sbjct: 199 NELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPF 258
Query: 1075 QVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTA---E 1131
W+ D+ S+ + + L+ H+ + + + + +M +V
Sbjct: 259 NNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQS 318
Query: 1132 PSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQM--------FNRDAKQ 1183
+ + + LR W+++ ++ R Q L + L Q F A
Sbjct: 319 YNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANA 378
Query: 1184 AEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDH 1243
+ + +++ + +E+ + + + + + + I+ + + +
Sbjct: 379 IGPWIQNKMEEIARSSIQI-TGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALV 437
Query: 1244 YAADKVKKKADNINDRRNANKERAHQQMETLKDQLQ 1279
+ ++I + + ++ Q+
Sbjct: 438 FDNKHTNYTMEHIRVGWELLLTTIARTINEVETQIL 473
Score = 104 bits (260), Expect = 4e-23
Identities = 55/473 (11%), Positives = 158/473 (33%), Gaps = 37/473 (7%)
Query: 1264 KERAHQQMETLKDQLQ--LHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKW-TRHQ 1320
+Q+ E L ++ + + L+ W++ + + + + +H+
Sbjct: 2 SSAVNQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHK 61
Query: 1321 AFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLF 1380
+ + + Q+ + + G +SD+ + LE K E L
Sbjct: 62 PPKVQEKCQLEINFNTLQTKLRISNRPAFMPS-EGKMVSDIAGAWQRLEQAEKGYEEWLL 120
Query: 1381 DSNREVL--------IHQTCDDIDSWMNELEKQIENED-TGSDLASVNILMQKQQMIETQ 1431
+ R + Q ++W E+ + +D + L V L++K + E+
Sbjct: 121 NEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESD 180
Query: 1432 MAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEA 1491
+A +V ++ A+ L + + + + +++++ R+ ALE+ ++
Sbjct: 181 LAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 240
Query: 1492 YQ--------FRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEP 1543
+ F + W+ + + +S+ + L ++ + +
Sbjct: 241 LETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADG 300
Query: 1544 RINLICNNGRKLI-------DEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEK 1596
I ++ + T +++L +W ++K+ V R L +
Sbjct: 301 ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 360
Query: 1597 AQ--------QYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYA 1648
Q Q+ A+ W+ + + + + ++ M + + E + +Y
Sbjct: 361 RQHANERLRRQFAAQANAIGPWIQNKMEEIA-RSSIQITGALEDQMNQLKQYEHNIINYK 419
Query: 1649 DTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
+ I +L + + + ++ + + L +++ +
Sbjct: 420 NNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQI 472
Score = 100 bits (249), Expect = 9e-22
Identities = 56/404 (13%), Positives = 147/404 (36%), Gaps = 31/404 (7%)
Query: 1001 MERDLAAIQAKLDSL-EAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLE 1059
+E + +Q KL + E + + +R++Q +E+ R +LE
Sbjct: 71 LEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLE 130
Query: 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASED-TPSSLADAEKLLNQHQAIREEIDNYTEDY 1118
+F + + W + + +D +SL + LL +H+A ++ + +
Sbjct: 131 HL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRV 188
Query: 1119 KKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQ--- 1175
+++ +++ D + + +R + + D W+ L + + R++ L + L
Sbjct: 189 EQIAAIAQELNEL----DYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETI 244
Query: 1176 -----MFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKING 1230
F + A + L ++E++++LI HE F T+ D +
Sbjct: 245 DQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQS 304
Query: 1231 VVQFADRL-------NDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQ---- 1279
++ + + N + D + + + K+ + ++L+++L
Sbjct: 305 IMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 364
Query: 1280 ----LHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLR 1335
QF +G W+Q K + + + + + + +E I + K+ + +
Sbjct: 365 NERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDK 424
Query: 1336 VQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERL 1379
++ + + + + + ++ L TT +
Sbjct: 425 LEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEV 468
Score = 98.8 bits (245), Expect = 3e-21
Identities = 66/492 (13%), Positives = 166/492 (33%), Gaps = 59/492 (11%)
Query: 1030 AEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASED 1089
+ A+ + +++ +E+L L E W+ +T + +
Sbjct: 2 SSAVNQENERLMEEYERLASELLE-----------------------WIRRTIPWLENRT 38
Query: 1090 TPSSLADAEKLLNQHQAIREEIDNYTEDYKKMM--DYGEKVTAEPSTHDDPQYMFLRERL 1147
++ +K L + R + K + ++ T ++ + +
Sbjct: 39 PEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAFMPSEGKMV 98
Query: 1148 KALRDGWEELHKMWENRQQLLSQSLN--------LQMFNRDAKQAEVLLSQQEHVLSK-D 1198
+ W+ L + + ++ L + + F + A E +E +L + D
Sbjct: 99 SDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKD 158
Query: 1199 ETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNIND 1258
+L +V L+++HEAF + + A+ D++ + A LN+ D++ A V + I D
Sbjct: 159 YESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICD 218
Query: 1259 RRNANKERAHQQMETLKDQLQLHQ--------FLQDCEELGEWVQEKKFTAQDETY-RSA 1309
+ + ++ E L+ +L + F + W++ QD S
Sbjct: 219 QWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSI 278
Query: 1310 KTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMK-------EKPELAELIGPKISDLG 1362
+ + S T H+ F+A + + +E+ K + +L
Sbjct: 279 EEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELR 338
Query: 1363 QQFDDLETTTKDKGERLFDSNREVLI--------HQTCDDIDSWMNELEKQIENEDTGSD 1414
++D ++ + + L + + I W+ ++I
Sbjct: 339 TKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQ-I 397
Query: 1415 LASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKI 1474
++ M + + E + + +LE +++Q+ + + + +E +
Sbjct: 398 TGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELL 457
Query: 1475 KEPLLARQRALE 1486
+ +E
Sbjct: 458 LTTIARTINEVE 469
Score = 94.2 bits (233), Expect = 1e-19
Identities = 62/413 (15%), Positives = 133/413 (32%), Gaps = 40/413 (9%)
Query: 1708 REVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQ 1767
R +L +WI + + + E F+++ R + + + +
Sbjct: 18 RLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNT 77
Query: 1768 LIAA-----GHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRE--------LHKFF 1814
L + + + + AWQ L + + + L+ KF
Sbjct: 78 LQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFR 137
Query: 1815 HDCKDILGRISEKHHAMS--DELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAK 1872
K + D V L RKH+ F DL Q +V+QI + +
Sbjct: 138 QKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQE 197
Query: 1873 LQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK--------FLIMVR 1924
L + A + +R ++ + W L R++ L L + F
Sbjct: 198 LNELDYHD-AVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAA 256
Query: 1925 TLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLS-- 1982
WM+ + + + ++ L+ H+ KA + + + +++ E+
Sbjct: 257 PFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVI 316
Query: 1983 -----RNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILE--------VYQFARDA 2029
R ++ + L + + + R ++LQ L QFA A
Sbjct: 317 QSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQA 376
Query: 2030 AVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERL 2082
W+ + + + +T +E+ + + + +E + I + LE
Sbjct: 377 NAIGPWIQNKMEEIARSSIQIT-GALEDQMNQLKQYEHNIINYKNNIDKLEGD 428
Score = 83.0 bits (204), Expect = 4e-16
Identities = 36/243 (14%), Positives = 92/243 (37%), Gaps = 2/243 (0%)
Query: 286 KRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNY 345
+ + ++ + D++ E+ + W++ + L D +S+ +Q + +
Sbjct: 232 EALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQF 291
Query: 346 -RTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHER 404
T+ + + + P + ++ W+++++ R
Sbjct: 292 KATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIR 351
Query: 405 ELALREELIRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEA 464
+ +L+EEL RQ E+L +F +A+ W+ +++ + GA+E + +
Sbjct: 352 DQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQ-ITGALEDQMNQLKQ 410
Query: 465 IETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLES 524
E +I Y+ + + Q ++ D N E++ W LL + +E+
Sbjct: 411 YEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVET 470
Query: 525 SLQ 527
+
Sbjct: 471 QIL 473
Score = 69.9 bits (170), Expect = 4e-12
Identities = 41/299 (13%), Positives = 113/299 (37%), Gaps = 23/299 (7%)
Query: 1808 RELHKFFHDCKDILGRISEKHHAMSD-ELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQI 1866
R + ++ ++L I + + + ++ +++ + + + Q +
Sbjct: 11 RLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQ 70
Query: 1867 CNE-----SAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDT-------- 1913
KL+ S +++ AW L+ A ++ L +
Sbjct: 71 LEINFNTLQTKLRISNRPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLE 130
Query: 1914 GDLFKFLIMVRTLMLWMDDVVRQMNTSEKA-RDVSGVELLMNNHQSLKAEIDTREDNFTA 1972
KF T W + + + ++ V L+ H++ ++++ +D
Sbjct: 131 HLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQ 190
Query: 1973 CISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQ-------- 2024
++ +EL +++ + + ++ + +Q + L ++R E L+ + ++ +
Sbjct: 191 IAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLE 250
Query: 2025 FARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLT 2083
FA+ AA W+ L M + +I+E+++LI HE F+ + + ++ +
Sbjct: 251 FAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQ 309
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin
capping, actin-binding, alternative splicing,
calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Length = 323
Score = 253 bits (647), Expect = 2e-75
Identities = 207/320 (64%), Positives = 254/320 (79%)
Query: 1699 EALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERV 1758
+LF LNREVDDLEQWIAEREVVAGSHELGQDY+HVT+L ERF+EF RDT IG ERV
Sbjct: 4 MRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERV 63
Query: 1759 AAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCK 1818
VN +AD+LI +GHSD+ATIAEWKDGLNEAW DLLELI+TRTQ+L AS ELHKF+HD K
Sbjct: 64 DTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAK 123
Query: 1819 DILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYA 1878
+I GRI +KH + +ELGRD +V TLQR H F D+Q L +QV+Q+ ++A+LQA+YA
Sbjct: 124 EIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA 183
Query: 1879 GEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMN 1938
G+KA +I RE EV+ AW SL +AC++R+ +L DTGD F+F MVR LMLWM+DV+RQ+
Sbjct: 184 GDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIE 243
Query: 1939 TSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGL 1998
EK RDVS VELLMNNHQ +KAEID R D+FT CI LGK LL+R HYAS EIKEKL+ L
Sbjct: 244 AQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQL 303
Query: 1999 SNQRNALLHRWEERWENLQL 2018
+ +R ++ +WE+RWE L+L
Sbjct: 304 TEKRKEMIDKWEDRWEWLRL 323
Score = 179 bits (456), Expect = 9e-50
Identities = 68/326 (20%), Positives = 145/326 (44%), Gaps = 7/326 (2%)
Query: 416 EKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAY-EE 474
+ + NR+ E W++E + + G D V ++ D +E
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 475 RVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQE 534
RV V ++ EL + D I K+ + W LLEL+ R L +S +L + + +
Sbjct: 62 RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121
Query: 535 MLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLD 594
I +++ K + L ++ G+ VE L + H+ E DI LG +V+ + + + R
Sbjct: 122 AKEIFGRIQD-KHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQA 180
Query: 595 EETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWI 654
+ I +R ++ +A+ L+ RR RL ++ ++ + + D W+
Sbjct: 181 AYAGD-----KADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWM 235
Query: 655 KEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADR 714
++ + + + D++++ LL++ H+ ++ EI A + I +G L+ ++H+ ++
Sbjct: 236 EDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEE 295
Query: 715 IRGRLQDTMAMWQNLLDLAAFRRKRL 740
I+ +L + ++D R + L
Sbjct: 296 IKEKLLQLTEKRKEMIDKWEDRWEWL 321
Score = 175 bits (446), Expect = 2e-48
Identities = 80/326 (24%), Positives = 162/326 (49%), Gaps = 8/326 (2%)
Query: 845 LLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEM-NANAS 903
L++L E D ++QWI E++ + + G+D E V +++ R+ F ++ N
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 904 RVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIE 963
RV VN LA +L++ H ++ I ++ LN WA L E + + L +++ + F+ +
Sbjct: 62 RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121
Query: 964 CRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIE 1023
+E I+DK + L + L D + TLQR + E D+ A+ ++ L+ +A ++
Sbjct: 122 AKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQ 179
Query: 1024 KEHP-EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQ 1082
+ ++A+ I++R ++ W+ L + R +L + GD RF + +W+
Sbjct: 180 AAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVI 239
Query: 1083 TDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142
+ +++ P ++ E L+N HQ I+ EID + + ++ G+ + A +
Sbjct: 240 RQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEE---- 295
Query: 1143 LRERLKALRDGWEELHKMWENRQQLL 1168
++E+L L + +E+ WE+R + L
Sbjct: 296 IKEKLLQLTEKRKEMIDKWEDRWEWL 321
Score = 173 bits (440), Expect = 1e-47
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 4/323 (1%)
Query: 1484 ALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HE 1542
+ +Q R+++D + WIAE+ A S E G +V ML+++ + A++ N +
Sbjct: 1 GSHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQ 60
Query: 1543 PRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLF 1602
R++ + + +LI+ GH D+A + L + W L + +D R L S + ++
Sbjct: 61 ERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYH 120
Query: 1603 DASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLT 1662
DA E + ++ + E+ G+D+ + + L + H T E ++ +RQL E A +L
Sbjct: 121 DAKEIFGRIQDKH-KKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQ 179
Query: 1663 SEM-HPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAERE 1721
+ ++D I ++++V + + L D RR +L + F V DL W+ +
Sbjct: 180 AAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVI 239
Query: 1722 VVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAE 1781
+ E +D V LL + + +A + + L+A H S I E
Sbjct: 240 RQIEAQEKPRDVSSVELLMNNHQGIKAEIDA-RNDSFTTCIELGKSLLARKHYASEEIKE 298
Query: 1782 WKDGLNEAWQDLLELIETRTQML 1804
L E +++++ E R + L
Sbjct: 299 KLLQLTEKRKEMIDKWEDRWEWL 321
Score = 170 bits (433), Expect = 8e-47
Identities = 71/321 (22%), Positives = 151/321 (47%), Gaps = 4/321 (1%)
Query: 634 LEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEI-QAHES 692
+L+QL ++ D E WI E+E + + ++G D + +L + + + +
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 693 QLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFAD 752
++ +V + DEL+N H A I W +LL+L R + L + + H+F+ D
Sbjct: 62 RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121
Query: 753 AVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL-- 810
A ++ + D + + E++GRD+ V++L + H +++ + + L+ A++L
Sbjct: 122 AKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQA 180
Query: 811 GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDR 870
++ ++ +R + +K LL+ + R+ RL+D ++ FS + W+ + R
Sbjct: 181 AYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIR 240
Query: 871 MLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQ 930
+ +D+ VE++ + + G E++A +L + LL +H SE+I +
Sbjct: 241 QIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKL 300
Query: 931 NQLNHDWAGLREKAEGKRDEL 951
QL + +K E + + L
Sbjct: 301 LQLTEKRKEMIDKWEDRWEWL 321
Score = 147 bits (371), Expect = 1e-38
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 2/318 (0%)
Query: 1170 QSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLT-TMEANDDKI 1228
L NR+ E ++++E V E + E V L +R F T +++
Sbjct: 4 MRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERV 63
Query: 1229 NGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCE 1288
+ V AD L + H A + + D +N+ E + + L +LH+F D +
Sbjct: 64 DTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAK 123
Query: 1289 ELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKP 1348
E+ +Q+K +E R TV + H FE +I + ++ ++Q+ + L
Sbjct: 124 EIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA 183
Query: 1349 -ELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIE 1407
+ A+ I + +++ + + L + + RL D+ + D+ WM ++ +QIE
Sbjct: 184 GDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIE 243
Query: 1408 NEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAV 1467
++ D++SV +LM Q I+ ++ + + + L EEI K +
Sbjct: 244 AQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQL 303
Query: 1468 EQRFEKIKEPLLARQRAL 1485
++ +++ + R L
Sbjct: 304 TEKRKEMIDKWEDRWEWL 321
Score = 145 bits (366), Expect = 6e-38
Identities = 57/323 (17%), Positives = 125/323 (38%), Gaps = 6/323 (1%)
Query: 954 AHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAI-QAKL 1012
H + + E + WI +++ + S + L D + LQ R RD I Q ++
Sbjct: 5 RHRLFQLNREVDDLEQWIAEREVVAGSHE-LGQDYEHVTMLQERFREFARDTGNIGQERV 63
Query: 1013 DSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLD 1072
D++ A + +A I E + W L +++ R L + +LH+F D
Sbjct: 64 DTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAK 123
Query: 1073 HFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEP 1132
+ + E+ E L H +I +++ + ++ A
Sbjct: 124 EIFGRIQDKHKKL-PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAY 182
Query: 1133 STHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQE 1192
+ +++R + + W+ L E+R+ L + + F + + +
Sbjct: 183 AGDKADD---IQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVI 239
Query: 1193 HVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKK 1252
+ E P ++ VE L+ H+ ++A +D ++ L HYA++++K+K
Sbjct: 240 RQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEK 299
Query: 1253 ADNINDRRNANKERAHQQMETLK 1275
+ ++R ++ + E L+
Sbjct: 300 LLQLTEKRKEMIDKWEDRWEWLR 322
Score = 142 bits (358), Expect = 8e-37
Identities = 52/311 (16%), Positives = 126/311 (40%), Gaps = 3/311 (0%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQM-AVKAKQVSELETQAE 1447
++ DD++ W+ E E + + G D V +L ++ + + ++V + A+
Sbjct: 12 NREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLAD 71
Query: 1448 ILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAE 1507
L + I K + + + + E + R + L E ++F D ++ I +
Sbjct: 72 ELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQD 131
Query: 1508 KLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDE-GHEDSAEF 1566
K E G V L++ + + +I ++ + + +L + + +
Sbjct: 132 KHKKL-PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDI 190
Query: 1567 TSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKD 1626
++++ W+ L A + RR +L+ + ++ + WM + + +++ +D
Sbjct: 191 QKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRD 250
Query: 1627 EISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGL 1686
S + LM H+ ++ ++ D+ E + L + H S++I K Q+ + +
Sbjct: 251 VSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEM 310
Query: 1687 KDLAGERRAKL 1697
D +R L
Sbjct: 311 IDKWEDRWEWL 321
Score = 140 bits (354), Expect = 3e-36
Identities = 59/321 (18%), Positives = 130/321 (40%), Gaps = 4/321 (1%)
Query: 1274 LKDQLQLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIAS-NKD 1331
+ +L Q ++ ++L +W+ E++ A + + V R + F + + ++
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 1332 RLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQT 1391
R+ V EL+ A I L + + DL + + L S +
Sbjct: 62 RVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHD 121
Query: 1392 CDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQK 1451
+I + + K++ E+ G D +V L + E + QV +L+ A LQ
Sbjct: 122 AKEIFGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQA 180
Query: 1452 TVP-DKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLP 1510
DK ++I +++ V + ++ + + +R+ L + ++F + D LW+ + +
Sbjct: 181 AYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIR 240
Query: 1511 SAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLI 1570
++ E + +V +L +Q + EID G+ L+ H S E +
Sbjct: 241 QIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKL 300
Query: 1571 EDLMDRWQQLKKAVDERRSKL 1591
L ++ +++ ++R L
Sbjct: 301 LQLTEKRKEMIDKWEDRWEWL 321
Score = 124 bits (312), Expect = 8e-31
Identities = 60/336 (17%), Positives = 119/336 (35%), Gaps = 21/336 (6%)
Query: 300 RMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGN 359
+ + DL +WI E G + V +F + G
Sbjct: 6 HRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTG-----NIGQ 60
Query: 360 LEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLE 419
V + N+ + +N+AW L + R L
Sbjct: 61 ERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELH---- 116
Query: 420 QLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAV 479
+F A + + + + ++ G D VE + H E DI A +V+ +
Sbjct: 117 ----KFYHDAKEIFGRIQDKHKKLPEE-LGRDQNTVETLQRMHTTFEHDIQALGTQVRQL 171
Query: 480 VTVSQEL-EAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYI 538
+ L A D I R+ VL W LL+ ++RR+RL + + F + +
Sbjct: 172 QEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDL 231
Query: 539 LDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETN 598
+ ME++ ++ + + + + VE L+ H ++A+I+ + + ++ + L +
Sbjct: 232 MLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK-- 289
Query: 599 EGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARL 634
I E++ QL + E++ +R L
Sbjct: 290 ----HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWL 321
Score = 119 bits (300), Expect = 3e-29
Identities = 56/277 (20%), Positives = 104/277 (37%), Gaps = 3/277 (1%)
Query: 1808 RELHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQI 1866
L + + D+ I+E+ A S ELG+D V LQ + + F +D + +
Sbjct: 6 HRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDT 65
Query: 1867 CNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTL 1926
N A + A I + + AWA L D R Q L + +L KF + +
Sbjct: 66 VNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEI 125
Query: 1927 MLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRN-H 1985
+ D +++ E RD + VE L H + + +I L +
Sbjct: 126 FGRIQDKHKKLP-EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAG 184
Query: 1986 YASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMS 2045
+++I+++ + +LL E R L + ++F W+ + +
Sbjct: 185 DKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEA 244
Query: 2046 MELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERL 2082
E + VE L+ H+ + A+ + F+ L
Sbjct: 245 QEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIEL 281
Score = 40.7 bits (95), Expect = 0.004
Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 2016 LQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIA-QEE 2074
+ ++Q R+ E W+ +E S ELG + V L ++ F + +E
Sbjct: 2 SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQE 61
Query: 2075 RFSALERLTTFELKELNKRKEEEERKRQEELAAK 2108
R + L EL + ++ L
Sbjct: 62 RVDTVNHLAD-ELINSGHSDAATIAEWKDGLNEA 94
>1pxy_A Fimbrin-like protein; calponin homology, F-actin-binding domain
(ABD), F-actin- crosslinking, structural genomics; 2.40A
{Arabidopsis thaliana} SCOP: a.40.1.1 PDB: 3byh_B
Length = 506
Score = 244 bits (623), Expect = 7e-70
Identities = 47/302 (15%), Positives = 102/302 (33%), Gaps = 30/302 (9%)
Query: 51 ESVQKKTFQKWVNSHLVR---------VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPR- 100
+K F + +N +L + LY ++DG +L KL+ V +
Sbjct: 5 IQSEKGPFVQHINRYLGDDPFLKQFLPLDPHSNQLYELVKDGVLLCKLINVAVPGTIDER 64
Query: 101 ---PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQI 157
+ EN L + + N+G+ D+ +G P L LGLI +I +
Sbjct: 65 AINTKRVLNPWERNENHTLCLNSAKAVGCSVVNIGTQDLAEGRPHLVLGLISQLIKIQLL 124
Query: 158 QDITI-------------EETDNQETKSAKDALLLWCQMK-TAGYHNVNVRNFTTSWRDG 203
D+ + ++ + + LL W G + V NF+ +D
Sbjct: 125 ADLNLKKTPQLVELLEDSDDVEELLRLPPEKVLLKWMNFHLKKGGYKKTVSNFSADLKDA 184
Query: 204 LAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKS 263
A+ +++ P+ L + + + AE ++ + L AE+I
Sbjct: 185 QAYAFLLNVLAPEHCDPATLDAKDPLERAELVLSHAE-RMNCKRYLTAEEIVE--GSSTL 241
Query: 264 IITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASL 323
+ +V +H + + ++ + D + + + ++ +
Sbjct: 242 NLAFVAQIFHERNGLNKDGKYAFAEMMTEDVETCRDERCYRLWINSLGIDSYVNNVFEDV 301
Query: 324 GD 325
+
Sbjct: 302 RN 303
Score = 231 bits (590), Expect = 1e-65
Identities = 49/235 (20%), Positives = 107/235 (45%), Gaps = 13/235 (5%)
Query: 52 SVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRP----TKGKMR 107
++ ++ W+NS + + +++ D+R+G +LL++L+ +S + KM
Sbjct: 275 CRDERCYRLWINSLGI--DSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHASKPPIKMP 332
Query: 108 IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDN 167
+EN ++ ++ ++ + L N+ +DIV GN +L LGL+W ++ +Q + +
Sbjct: 333 FRKVENCNQVIKIGKQLKFSLVNVAGNDIVQGNKKLILGLLWQLMRFHMLQLLKSLRSRT 392
Query: 168 QETKSAKDALLLWCQMKTAGY-HNVNVRNFT-TSWRDGLAFNAIIHKHRPDLIQFEKLSK 225
+ +L W K + + +F S GL F ++ P ++ + ++K
Sbjct: 393 LGKEMTDADILSWANRKVRTMGRKLQIESFKDKSLSSGLFFLNLLWAVEPRVVNWNLVTK 452
Query: 226 SN--AIYNLNNAFTVA-EDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSK 277
LN + V+ KLG + L EDI + ++K I+ + ++ +
Sbjct: 453 GETDDEKRLNATYIVSVARKLGCSVFLLPEDIV--EVNQKMILILTASIMYWSLQ 505
Score = 49.3 bits (117), Expect = 1e-05
Identities = 49/286 (17%), Positives = 93/286 (32%), Gaps = 41/286 (14%)
Query: 55 KKTFQKWVNSHLVR--VSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLE 112
+K KW+N HL + + + DL+D + LL VL+ E T LE
Sbjct: 154 EKVLLKWMNFHLKKGGYKKTVSNFSADLKDAQAYAFLLNVLAPEHCDPATLDAK--DPLE 211
Query: 113 NVDKALQFLREQ--RVHLENMGSHDIVDGNPRLSLGLI------WTIILRFQIQDITIEE 164
+ L + +L + +IV+G+ L+L + + +
Sbjct: 212 RAELVLSHAERMNCKRYLT---AEEIVEGSSTLNLAFVAQIFHERNGLNKDGKYAFAEMM 268
Query: 165 TDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS 224
T++ ET + LW + V N R+G ++ K P + ++ S
Sbjct: 269 TEDVETCRDERCYRLWINSLGI---DSYVNNVFEDVRNGWILLEVLDKVSPSSVNWKHAS 325
Query: 225 KS------NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
K + N N + + + DI Q ++K I+ + +
Sbjct: 326 KPPIKMPFRKVENCNQVIKIGKQLKFSLVNVAGNDIV--QGNKKLILGLLWQLMRFHML- 382
Query: 279 KQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIASLG 324
+ E +D+L W + ++G
Sbjct: 383 --------------QLLKSLRSRTLGKEMTDADILSWANRKVRTMG 414
>1rt8_A Fimbrin; filamentous actin binding domain (ABD), calponin homology,
actin-crosslinking, structural protein; 2.00A
{Schizosaccharomyces pombe} SCOP: a.40.1.1
Length = 513
Score = 239 bits (610), Expect = 4e-68
Identities = 70/412 (16%), Positives = 135/412 (32%), Gaps = 44/412 (10%)
Query: 53 VQKKTFQKWVNSHL---------VRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPT- 102
+++ F K +NS L V ++ + + +DG +L KL+ + +
Sbjct: 12 EERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVL 71
Query: 103 ------KGKMRIHCLENVDKALQFLREQR-VHLENMGSHDIVDGNPRLSLGLIWTIILRF 155
K C+EN + + + + + N+G+ DI++G L LGL+W II R
Sbjct: 72 NKQRNNKPLDNFKCIENNNVVINSAKAMGGISITNIGAGDILEGREHLILGLVWQIIRRG 131
Query: 156 QIQDITI-------------EETDNQETKSAKDALLLWCQMKTAGY-HNVNVRNFTTSWR 201
+ I I E D + LL W V NF+
Sbjct: 132 LLGKIDITLHPELYRLLEEDETLDQFLRLPPEKILLRWFNYHLKAANWPRTVSNFSKDVS 191
Query: 202 DGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDE 261
DG + ++++ P+L L ++ + AE KL K L + +
Sbjct: 192 DGENYTVLLNQLAPELCSRAPLQTTDVLQRAEQVLQNAE-KLDCRKYLTPTAMVA--GNP 248
Query: 262 KSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIA 321
K + +V ++ ++ + K + + E E W+
Sbjct: 249 KLNLAFVAHLFNTHPGLEPLNEEEK---------PEIEPFDAEGEREARVFTLWLNSLDV 299
Query: 322 SLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYTP 381
+ F N+L LLQ + T ++ K N
Sbjct: 300 TPSIHDFFNNLRDG-LILLQAYDKITPNTVNWKKVNKAPASGDEMMRFKAVENCNYAVDL 358
Query: 382 KEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARFNRKASMRE 433
+ + S + + LAL +++R + L + ++ +
Sbjct: 359 GKNQGFSLVGIQGADITDGSRTLTLALVWQMMRMNITKTLHSLSRGGKTLSD 410
Score = 220 bits (562), Expect = 9e-62
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 19/249 (7%)
Query: 38 FERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGER 97
E D + + F W+NS V + I D + +LRDG +LL+ + ++
Sbjct: 270 EEEKPEIEPFDAEGEREARVFTLWLNSLDV--TPSIHDFFNNLRDGLILLQAYDKITPNT 327
Query: 98 LPR--------PTKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIW 149
+ MR +EN + A+ + Q L + DI DG+ L+L L+W
Sbjct: 328 VNWKKVNKAPASGDEMMRFKAVENCNYAVDLGKNQGFSLVGIQGADITDGSRTLTLALVW 387
Query: 150 TIILRFQIQDITIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTT-SWRDGLAFNA 208
++ R I + +T S D + M G +R+F S G+
Sbjct: 388 QMM-RMNITKTLHSLSRGGKTLSDSDMVAWANSMAAKGGKGSQIRSFRDPSISTGVFVLD 446
Query: 209 IIHKHRPDLIQFEKLSKS----NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSI 264
++H + + + + ++ AI N A ++A KLG + EDI + +
Sbjct: 447 VLHGIKSEYVDYNLVTDGSTEELAIQNARLAISIAR-KLGAVIFILPEDIVA--VRPRLV 503
Query: 265 ITYVVTYYH 273
+ ++ +
Sbjct: 504 LHFIGSLMA 512
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken
structural genomics/proteomics initiative, RSGI,
structural protein; NMR {Homo sapiens}
Length = 127
Score = 214 bits (548), Expect = 6e-65
Identities = 91/120 (75%), Positives = 100/120 (83%)
Query: 167 NQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS 226
+ + AKDALLLWCQMKTAGY NVNV NFTTSWRDGLAFNAI+HKHRPDL+ FE L K
Sbjct: 2 SSGSSGAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKC 61
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQETVQGK 286
NA YNL NAF +AE +LGLTKLLD ED+ V+QPDEKSIITYV TYYHYFSKMK V+GK
Sbjct: 62 NAHYNLQNAFNLAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGK 121
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of
spectrin, alpha-helical linker region, 3-helix
coiled-coil, structural protein; 2.50A {Gallus gallus}
SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Length = 322
Score = 220 bits (562), Expect = 5e-64
Identities = 102/325 (31%), Positives = 174/325 (53%), Gaps = 8/325 (2%)
Query: 528 LQQSFQEMLYILDS-MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVV 586
QQ+F + D + E++ L S+DYGK L V +LL+KH L+EADI+ +R+K +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 587 QQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWD 646
Q+ + D + + ++ + + + + +A RRA+L ES +L Q + D
Sbjct: 64 SQADSLMTSS------AFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD 117
Query: 647 MADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVN 706
M DEE+WIKEK+ +VS+ D G DLT + L KHK LE E+ AHE + V+ G +L +
Sbjct: 118 MDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD 177
Query: 707 QQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRL 766
G + I+ RL + W+ L LAA R +RLEE++++ QF A+ + + W+ + + L
Sbjct: 178 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTL 237
Query: 767 VSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPEVLERLA 825
V+SED G A +Q LLKKH+ + + + + L ++ + ++
Sbjct: 238 VASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK 297
Query: 826 SIEFRYKELLELAKLRKQRLLDALS 850
++ + +L + A RK +L + +
Sbjct: 298 GLKGKVSDLEKAAAQRKAKLDENSA 322
Score = 211 bits (538), Expect = 9e-61
Identities = 95/319 (29%), Positives = 165/319 (51%)
Query: 1383 NREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSEL 1442
N++ + D D W++E+E + +ED G DLASVN L++K Q++E ++ ++ +L
Sbjct: 3 NKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 62
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEK 1502
+QA+ L + ++ K+ + RF++IK AR+ L + +QF RD++DE+
Sbjct: 63 NSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 1503 LWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHED 1562
WI EK S +YG L V L+KK++ L E+ HEP I + + G+KL D+
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1563 SAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVED 1622
E + +D W++LK+ R +L +S + QQ++ + E E+W++E+ + ED
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASED 242
Query: 1623 RGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKL 1682
G + Q L+KKHE E + D + + L + + + I K +
Sbjct: 243 YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGK 302
Query: 1683 YAGLKDLAGERRAKLDEAL 1701
+ L+ A +R+AKLDE
Sbjct: 303 VSDLEKAAAQRKAKLDENS 321
Score = 198 bits (505), Expect = 2e-56
Identities = 92/323 (28%), Positives = 168/323 (52%), Gaps = 6/323 (1%)
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
FN + WLSE + L++ +++G DL +V KKH+ +E DI A+E+R++ +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 481 TVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILD 540
+ + L D ++ ++E + + + + ARR +L S +L Q F++M
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 541 SMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEG 600
++E K+ + S+DYG+ L GV++L +KH +EA++ ++ V+ ++ D+
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDN---- 179
Query: 601 FRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQI 660
I +R+ Q D + EL +LA R RLEES + Q ++ +EE WI EK +
Sbjct: 180 --TIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTL 237
Query: 661 VSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQ 720
V++ D G L I LL KH+A E + H+ ++ V A G++L+ + + + I +++
Sbjct: 238 VASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK 297
Query: 721 DTMAMWQNLLDLAAFRRKRLEEA 743
+L AA R+ +L+E
Sbjct: 298 GLKGKVSDLEKAAAQRKAKLDEN 320
Score = 185 bits (471), Expect = 8e-52
Identities = 89/318 (27%), Positives = 159/318 (50%), Gaps = 2/318 (0%)
Query: 640 LWQLYWDMADE-ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVI 698
Q + + + W+ E E ++++ D G DL ++N LL KH+ LE +I AHE +L +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 699 AVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDI 758
+ D L+ F +++ + + +Q + +AA RR +L E+ HQFF D D +
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 759 WMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKE-S 817
W+ + LVSSED GRD VQ+L KKHK + EL + I+ + + +L D +
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 818 PEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVP 877
E+ +RLA +KEL +LA R QRL ++L + + + + WI EK ++A+
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDY 243
Query: 878 GKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDW 937
G + ++ + +++ F+ + + RV V L+ + + E I + L
Sbjct: 244 GDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKV 303
Query: 938 AGLREKAEGKRDELNSAH 955
+ L + A ++ +L+
Sbjct: 304 SDLEKAAAQRKAKLDENS 321
Score = 180 bits (459), Expect = 3e-50
Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 1/315 (0%)
Query: 1490 EAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLIC 1549
+ F I+D W++E S +YG L +V+ L KK+Q L +I HE R+ +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1550 NNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAES 1609
+ L+ D+++ E + R+Q++K RR+KL +S + Q+ D + ES
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1610 WMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
W+ E++L + ED G+D QNL KKH+ LE + + I+ + +T ++L+ +
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHEL 1729
++I + +Q + LK LA R +L+E+L+ V++ E WI E+ + S +
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDY 243
Query: 1730 GQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEA 1789
G + L ++ + F+ D +RV V + LI + I GL
Sbjct: 244 GDTLAAIQGLLKKHEAFETDFTVHK-DRVNDVCANGEDLIKKNNHHVENITAKMKGLKGK 302
Query: 1790 WQDLLELIETRTQML 1804
DL + R L
Sbjct: 303 VSDLEKAAAQRKAKL 317
Score = 168 bits (426), Expect = 9e-46
Identities = 74/320 (23%), Positives = 150/320 (46%), Gaps = 2/320 (0%)
Query: 743 AVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEA 802
A F D D W+ + L++SED G+D A+V +LLKKH+ + ++ + ++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 803 LRNQASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGV 861
L +QA L ++ +V ++ +I R++ + +A R+ +L ++ L++ F + D
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 862 QQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHP 921
+ WI EK ++++ G+D+ V+ ++ ++ + E+ A+ + V ++L
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 922 NSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQST 981
E+I R Q W L++ A + L + Q F E +WI +K ++ S
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASE 241
Query: 982 DSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIR 1041
D L I L ++ E D + +++ + A + K++ E I ++K ++
Sbjct: 242 D-YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLK 300
Query: 1042 IIWEQLTQMLKERDAKLEEA 1061
L + +R AKL+E
Sbjct: 301 GKVSDLEKAAAQRKAKLDEN 320
Score = 166 bits (421), Expect = 4e-45
Identities = 71/325 (21%), Positives = 165/325 (50%), Gaps = 5/325 (1%)
Query: 954 AHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLD 1013
A+ Q F+ ++ W+ + + +L S D + DL + L ++ +E D++A + +L
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLK 60
Query: 1014 SLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDH 1073
L ++A ++ + ++++ + I ++++ M R AKL E+ LH+F RD+D
Sbjct: 61 DLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD 120
Query: 1074 FQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS 1133
+ W+ + + V+SED L + L +H+ + E+ + + ++D G+K++ + +
Sbjct: 121 EESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180
Query: 1134 THDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEH 1193
+ +++RL D W+EL ++ R Q L +SL Q F + ++ E ++++
Sbjct: 181 IGKEE----IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMT 236
Query: 1194 VLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKA 1253
+++ ++ L ++ L+K+HEAF T + D++N V + L ++++ + + K
Sbjct: 237 LVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKM 296
Query: 1254 DNINDRRNANKERAHQQMETLKDQL 1278
+ + + ++ A Q+ L +
Sbjct: 297 KGLKGKVSDLEKAAAQRKAKLDENS 321
Score = 165 bits (419), Expect = 6e-45
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 3/319 (0%)
Query: 1596 KAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLG 1655
K Q + + + W+SE E + ED GKD S NL+KKH+ LE + + D ++ L
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1656 ETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQ 1715
A L + ++ Q+ K+ ++ + +K +A RRAKL+E+ +L R++DD E
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1716 WIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSD 1775
WI E++++ S + G+D V L ++ K + + A + V +L
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA-HEPAIQGVLDTGKKLSDDNTIG 182
Query: 1776 SATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM-SDE 1834
I + + W++L +L R Q L S E +F + ++ I+EK + S++
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASED 242
Query: 1835 LGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVN 1894
G ++ L +KH+ F D + +V +C L + IT + +
Sbjct: 243 YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH-VENITAKMKGLKG 301
Query: 1895 AWASLQNACDARKQKLGDT 1913
+ L+ A RK KL +
Sbjct: 302 KVSDLEKAAAQRKAKLDEN 320
Score = 163 bits (414), Expect = 3e-44
Identities = 73/323 (22%), Positives = 151/323 (46%), Gaps = 5/323 (1%)
Query: 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKK 1120
A F + F WL++ + +ASED LA LL +HQ + +I + + K
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRD 1180
+ + + + D ++++ + + ++ + M R+ L++S L F RD
Sbjct: 62 LNSQADSLMTS--SAFDTS--QVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD 117
Query: 1181 AKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLND 1240
E + +++ ++S ++ +L V+NL K+H+ + A++ I GV+ +L+D
Sbjct: 118 MDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD 177
Query: 1241 EDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFT 1300
++ ++++++ D K+ A + + L++ L+ QF+ + EE W+ EK
Sbjct: 178 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTL 237
Query: 1301 AQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKIS 1359
E Y + + +H+AFE + +KDR+ V +G +L+K+ E I K+
Sbjct: 238 VASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK 297
Query: 1360 DLGQQFDDLETTTKDKGERLFDS 1382
L + DLE + +L ++
Sbjct: 298 GLKGKVSDLEKAAAQRKAKLDEN 320
Score = 155 bits (393), Expect = 2e-41
Identities = 70/301 (23%), Positives = 138/301 (45%), Gaps = 3/301 (0%)
Query: 1809 ELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQIC 1867
+ F KD +SE + S++ G+D SVN L +KHQ D+ + +++ +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1868 NESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLM 1927
+++ L S A + ++ ++ + + +++ AR+ KL ++ L +F +
Sbjct: 64 SQADSLMTSSAFD-TSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 1928 LWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYA 1987
W+ + +++ + RD++GV+ L H+ L+AE+ E + GK+L N
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1988 SNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSME 2047
EI+++L + L R + L+ LE QF + EAW+ + + S +
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASED 242
Query: 2048 LGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAA 2107
G T+ ++ L+KKHEAFE ++R + + +L + N E + + L
Sbjct: 243 YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGE-DLIKKNNHHVENITAKMKGLKG 301
Query: 2108 K 2108
K
Sbjct: 302 K 302
Score = 151 bits (383), Expect = 4e-40
Identities = 77/318 (24%), Positives = 154/318 (48%), Gaps = 1/318 (0%)
Query: 1279 QLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQ 1337
+ F ++ W+ E + E Y + +V++ +HQ EA+I++++DRL +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1338 QSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDS 1397
LM + K + +F +++ + +L +S+R + DD +S
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1398 WMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKM 1457
W+ E + + +ED G DL V L +K + +E ++A + + + L
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 1458 EEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEY 1517
EEI + + ++++K+ AR + LE+ E QF ++E+E+ WI EK+ S +Y
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDY 243
Query: 1518 GNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRW 1577
G++L + L KK+++ + H+ R+N +C NG LI + + T+ ++ L +
Sbjct: 244 GDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKV 303
Query: 1578 QQLKKAVDERRSKLIQSE 1595
L+KA +R++KL ++
Sbjct: 304 SDLEKAAAQRKAKLDENS 321
Score = 151 bits (383), Expect = 4e-40
Identities = 73/319 (22%), Positives = 148/319 (46%), Gaps = 3/319 (0%)
Query: 1700 ALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVA 1759
A K N + D + W++E E + S + G+D V L ++ + + D A +R+
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHE-DRLK 60
Query: 1760 AVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKD 1819
+N AD L+ + D++ + + ++ +N +Q + + R L S LH+FF D D
Sbjct: 61 DLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD 120
Query: 1820 ILGRISEKHHAMSD-ELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYA 1878
I EK +S + GRD V L++KH+ +L + +Q + + KL
Sbjct: 121 EESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDD-N 179
Query: 1879 GEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMN 1938
+EI R A+ V+ W L+ AR Q+L ++ + +F+ V W+++ + +
Sbjct: 180 TIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVA 239
Query: 1939 TSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGL 1998
+ + ++ ++ L+ H++ + + +D + G++L+ +N++ I K+ GL
Sbjct: 240 SEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGL 299
Query: 1999 SNQRNALLHRWEERWENLQ 2017
+ + L +R L
Sbjct: 300 KGKVSDLEKAAAQRKAKLD 318
Score = 123 bits (311), Expect = 1e-30
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 20/336 (5%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
+ + D W+ E A L + L V L + + +
Sbjct: 6 QNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEAD------ISAHEDRL 59
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
Q+ + T + IN ++R++ R L E +
Sbjct: 60 KDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQ------ 113
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTV 482
F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q V+
Sbjct: 114 --FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDT 171
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSM 542
++L + + I R + W L +L AR RLE SL+ QQ + +
Sbjct: 172 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 231
Query: 543 EELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFR 602
E + S+DYG L ++ LL+KH E D V +RV V + + +
Sbjct: 232 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKN------ 285
Query: 603 PCDPAIIVERVQQLEDAYSELVKLAVERRARLEESR 638
I +++ L+ S+L K A +R+A+L+E+
Sbjct: 286 NHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 321
Score = 81.9 bits (202), Expect = 2e-16
Identities = 45/233 (19%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 296 MDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFV 355
++ +H++ D WI+E + + L GVQ +
Sbjct: 105 LNESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEA-------- 156
Query: 356 EKGNLEVLLFTLQSKMR--ANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELI 413
E E + + + +++ + + ++ W+ L++ R L E L
Sbjct: 157 ELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
Query: 414 RQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYE 473
Q+ F E W++E LV+ +++G L A++ KKHEA ETD ++
Sbjct: 217 YQQ--------FVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHK 268
Query: 474 ERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSL 526
+RV V ++L + H ++ I A+ + + + L + R+ +L+ +
Sbjct: 269 DRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 321
>1bkr_A Spectrin beta chain; filamentous actin-binding domain,
cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB:
1aa2_A
Length = 109
Score = 205 bits (523), Expect = 1e-61
Identities = 90/108 (83%), Positives = 96/108 (88%)
Query: 171 KSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIY 230
KSAKDALLLWCQMKTAGY NVN+ NFTTSWRDG+AFNA+IHKHRPDLI F+KL KSNA Y
Sbjct: 2 KSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHY 61
Query: 231 NLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKM 278
NL NAF +AE LGLTKLLD EDI V+ PDEKSIITYVVTYYHYFSKM
Sbjct: 62 NLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKM 109
>1bhd_A Utrophin; calponin homology, actin binding, structural protein;
2.00A {Homo sapiens} SCOP: a.40.1.1
Length = 118
Score = 205 bits (523), Expect = 1e-61
Identities = 49/114 (42%), Positives = 73/114 (64%)
Query: 167 NQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS 226
+ + +++ LL W + T Y VNV NFTTSW DGLAFNA++H+H+PDL ++K+ K
Sbjct: 3 DLQQTNSEKILLSWVRQTTRPYSQVNVLNFTTSWTDGLAFNAVLHRHKPDLFSWDKVVKM 62
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQ 280
+ I L +AF+ A+ LG+ KLLD ED+ V PD+KSII Y+ + + +
Sbjct: 63 SPIERLEHAFSKAQTYLGIEKLLDPEDVAVRLPDKKSIIMYLTSLFEVLPQQVT 116
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain,
actin binding, structural genomics, NPPSFA; NMR {Homo
sapiens} PDB: 2jv9_A 2k3s_A
Length = 128
Score = 204 bits (521), Expect = 2e-61
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 167 NQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS 226
+ + K LL WC+ KT GY +V+++NF++SW DG+AF A++H P+ + +LS
Sbjct: 2 SSGSSGIKQMLLDWCRAKTRGYEHVDIQNFSSSWSDGMAFCALVHNFFPEAFDYGQLSPQ 61
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDI-FVEQPDEKSIITYVVTYYHYFSKMKQ---ET 282
N N AF+ AE +LLD ED+ + +PD K + TY+ +Y + +
Sbjct: 62 NRRQNFEVAFSSAETHADCPQLLDTEDMVRLREPDWKCVYTYIQEFYRCLVQKGLVKTKK 121
Query: 283 VQGKRIG 289
G G
Sbjct: 122 SSGPSSG 128
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Length = 121
Score = 204 bits (521), Expect = 3e-61
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 165 TDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLS 224
+ + LL WCQ +T GY VNV + T SW+ GLA AIIH++RPDLI F+ L
Sbjct: 2 SSGSSGVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD 61
Query: 225 KSNAIYNLNNAFTVAEDKLGLTKLLDAEDIF-VEQPDEKSIITYVVTYYHYFSKMKQET 282
+ N N AF +AE +LG++ ++ +++ V +PD+ S++ Y+ +Y F +
Sbjct: 62 EQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSGPSS 120
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains;
CH domain, mical, structural genomics; NMR {Homo
sapiens} PDB: 2dk9_A
Length = 116
Score = 202 bits (515), Expect = 2e-60
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 167 NQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKS 226
+ + ++ LL WCQ +TAGY V+V + ++SW DGLA A++++ +P L++ +L
Sbjct: 2 SSGSSGTQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGL 61
Query: 227 NAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITYVVTYYHYFSKMKQ 280
A+ A VAE++LG+T ++ A+ + V D +I Y+ ++ F
Sbjct: 62 GALEATAWALKVAENELGITPVVSAQAV-VAGSDPLGLIAYLSHFHSAFKSGPS 114
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 194 bits (496), Expect = 4e-58
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 168 QETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSN 227
+A +LL+WC+ T Y V + NFTTSWR+GL+F AI+H RPDLI ++ L+ +
Sbjct: 5 SSGPNASQSLLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYKSLNPQD 64
Query: 228 AIYNLNNAFTVAEDKLGLTKLLDAED-IFVEQPDEKSIITYVVTYYHYFSKMKQ 280
N A+ +G+++LL+ D + + PD+ +++TY+ +FS
Sbjct: 65 IKENNKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHFSSGPS 117
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton,
hemidesmosomes epidermolysis bullosa, structural
protein; 2.05A {Homo sapiens} PDB: 2odu_A
Length = 235
Score = 196 bits (498), Expect = 1e-56
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 9/232 (3%)
Query: 295 AMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKF 354
A + EY L LL+W++ A+ +R+F +S ++ QF ++ +E P K
Sbjct: 6 ANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKE 65
Query: 355 VEKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIR 414
+K + + +L+ ++A K G D+ K W +L A ERE LR E R
Sbjct: 66 ADKNRSKGIYQSLEGAVQAGQLK---VPPGYHPLDVEKEWGKLHVAILEREKQLRSEFER 122
Query: 415 QEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEE 474
E L+++ + +A + E L++ L+ D L A ++ +E D+ +
Sbjct: 123 LEALQRIVTKLQMEAGLAEEQLNQADALLQSD---VRLLAAGKVPQRAGEVERDLDKADS 179
Query: 475 RVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSL 526
++ + Q L+ ++ +++ R V RL L+ + +RL++ +
Sbjct: 180 MIRLLFNDVQTLKDGRHPQGEQMYRR---VYRLHKRLVAIRTEYNLRLKAGV 228
Score = 57.8 bits (139), Expect = 8e-09
Identities = 29/218 (13%), Positives = 69/218 (31%), Gaps = 20/218 (9%)
Query: 856 SEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKE----MNANASRVAVVNQL 911
+ QW+ E++EI+ ++ F + A+ +R + Q
Sbjct: 18 ELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQS 77
Query: 912 ARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQT--------FHIE 963
+ + +W L + +L S +E
Sbjct: 78 LEGAVQAGQLKVPPGY-HPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQME 136
Query: 964 CRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIE 1023
+ +LQS ++ L + +R +ERDL + + L + ++
Sbjct: 137 AGLAEEQLNQADALLQS----DVRLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLK 192
Query: 1024 KEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEA 1061
+ E + R+ + + ++L + E + +L+
Sbjct: 193 DGRHPQGEQMYRRVYR---LHKRLVAIRTEYNLRLKAG 227
Score = 57.0 bits (137), Expect = 1e-08
Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 16/206 (7%)
Query: 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEI--DNYTEDYKKM 1121
+ + W+ PSS + E L +Q +E + +
Sbjct: 13 WQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSK 72
Query: 1122 MDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQM----- 1176
Y A + + W +LH R++ L
Sbjct: 73 GIYQSLEGAVQAGQLKVP---PGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRI 129
Query: 1177 ---FNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQ 1233
+A AE L+Q + +L D L + +R ++ D I +
Sbjct: 130 VTKLQMEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSMIRLLFN 186
Query: 1234 FADRLNDEDHYAADKVKKKADNINDR 1259
L D H +++ ++ ++ R
Sbjct: 187 DVQTLKDGRHPQGEQMYRRVYRLHKR 212
Score = 54.0 bits (129), Expect = 1e-07
Identities = 34/231 (14%), Positives = 82/231 (35%), Gaps = 19/231 (8%)
Query: 1483 RALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKE----I 1538
RA E + ++R + W+ + + + +S + +L + +
Sbjct: 5 RANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAK 64
Query: 1539 DNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQ 1598
+ + R I + + G D+ W +L A+ ER +L +
Sbjct: 65 EADKNRSKGIYQSLEGAVQAGQLKVPPGYH-PLDVEKEWGKLHVAILEREKQLRSEFERL 123
Query: 1599 QYLF--------DASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADT 1650
+ L +A AE +++ + + + ++ + ++ +E ++
Sbjct: 124 EALQRIVTKLQMEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSM 180
Query: 1651 IRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
IR L + L HP+ +Q+ +V +L+ L + E +L +
Sbjct: 181 IRLLFNDVQTLKDGRHPQGEQM---YRRVYRLHKRLVAIRTEYNLRLKAGV 228
Score = 53.6 bits (128), Expect = 1e-07
Identities = 26/212 (12%), Positives = 67/212 (31%), Gaps = 13/212 (6%)
Query: 1708 REVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQ 1767
V L QW+ ++ + +LW +F +F GI
Sbjct: 18 ELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQS 77
Query: 1768 LIAAGHSDSATIAEWK--DGLNEAWQDLLELIETRTQMLVASREL--------HKFFHDC 1817
L A + + + + W L I R + L + E K +
Sbjct: 78 LEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEA 137
Query: 1818 KDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASY 1877
++++ + ++ + + ++ +DL S ++ + N+ L+
Sbjct: 138 GLAEEQLNQADALLQSDV--RLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGR 195
Query: 1878 AGEKAKEITNREAEVVNAWASLQNACDARKQK 1909
+ +++ R + +++ + R +
Sbjct: 196 HPQ-GEQMYRRVYRLHKRLVAIRTEYNLRLKA 226
Score = 53.6 bits (128), Expect = 2e-07
Identities = 29/220 (13%), Positives = 74/220 (33%), Gaps = 17/220 (7%)
Query: 533 QEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKS-------V 585
+ +L +L M + +E L + + E K+
Sbjct: 18 ELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQS 77
Query: 586 VQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYW 645
++ + + + G+ P D + + +L A E K RLE +++
Sbjct: 78 LEGAVQAGQLKVPPGYHPLD---VEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQ 134
Query: 646 DMADE-ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDEL 704
A E + + + ++ + L + + +E ++ +S + + L
Sbjct: 135 MEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTL 191
Query: 705 VNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAV 744
+ +H +++ R+ + + L+ + RL+ V
Sbjct: 192 KDGRHPQGEQMYRRVYR---LHKRLVAIRTEYNLRLKAGV 228
Score = 47.0 bits (111), Expect = 2e-05
Identities = 30/219 (13%), Positives = 69/219 (31%), Gaps = 15/219 (6%)
Query: 1392 CDDIDSWMNELEKQIENEDTGSDLASVNILMQK-QQMIETQMAVKAKQVSELETQAEILQ 1450
+ WM E S + IL + + E ++ K + + + L+
Sbjct: 20 VLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLE 79
Query: 1451 KTV--------PDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKE--AYQFRRDIED 1500
V P V K+ +E L + + + + + +
Sbjct: 80 GAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGL 139
Query: 1501 EKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGH 1560
+ + + +S L + ++ + +++D + I L+ N+ + L D H
Sbjct: 140 AEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRH 196
Query: 1561 EDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQ 1599
+ + L R ++ + R K + A Q
Sbjct: 197 PQGEQMYRRVYRLHKRLVAIRTEYNLRL-KAGVAAPATQ 234
Score = 43.6 bits (102), Expect = 3e-04
Identities = 28/228 (12%), Positives = 83/228 (36%), Gaps = 15/228 (6%)
Query: 1271 METLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAF-EAEIAS 1328
M + QL+ ++ + L +W++ ++ + S + + W++ F E E+ +
Sbjct: 4 MRANELQLRWQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPA 63
Query: 1329 NKDRLLRVQQSGSELMK--EKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREV 1386
+ R + L + +L G D+ +++ L ++ ++L +
Sbjct: 64 KEADKNRSKGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERL 123
Query: 1387 --------LIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQ 1438
+ + +N+ + ++++ L + + Q+ +E +
Sbjct: 124 EALQRIVTKLQMEAGLAEEQLNQADALLQSD---VRLLAAGKVPQRAGEVERDLDKADSM 180
Query: 1439 VSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALE 1486
+ L + L+ + E++ + + +R I+ R +A
Sbjct: 181 IRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLKAGV 228
Score = 42.0 bits (98), Expect = 0.001
Identities = 27/222 (12%), Positives = 58/222 (26%), Gaps = 19/222 (8%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
Q+Y WM + L + + + +
Sbjct: 14 QEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKE--MELPAKEADKNRS 71
Query: 1658 ARQL-TSEMHPESDQIALKQ----SQVDKLYAGLKDLAGERRAKLDEALKLFM------- 1705
+ E ++ Q+ + V+K + L ER +L +
Sbjct: 72 KGIYQSLEGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVT 131
Query: 1706 -LNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGI 1764
L E E+ + + + + S + +R E +RD + + +
Sbjct: 132 KLQMEAGLAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKAD-SMIRLLFND 187
Query: 1765 ADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVA 1806
L H + L++ + R + VA
Sbjct: 188 VQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLKAGVA 229
Score = 40.9 bits (95), Expect = 0.002
Identities = 28/195 (14%), Positives = 59/195 (30%), Gaps = 15/195 (7%)
Query: 1922 MVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLK-AEIDTREDNFTACISLGKEL 1980
+V L+ WM +E+L + K E+ +E + + + L
Sbjct: 19 LVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSL 78
Query: 1981 LSRNHYASNEIKEKL--VGLSNQRNALLHRWEERWENLQLILEVYQ--------FARDAA 2030
++ + + + L ER + L+ E + +A
Sbjct: 79 EGAVQAGQLKVPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAG 138
Query: 2031 VAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKEL 2090
+AE L + L S + + ++ E+ + L LK+
Sbjct: 139 LAEEQLNQADALLQSDV---RLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQ-TLKDG 194
Query: 2091 NKRKEEEERKRQEEL 2105
+ E+ +R L
Sbjct: 195 RHPQGEQMYRRVYRL 209
Score = 37.8 bits (87), Expect = 0.023
Identities = 26/221 (11%), Positives = 60/221 (27%), Gaps = 29/221 (13%)
Query: 963 ECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSG--------MERDLAAIQAKLDS 1014
+ W+ + I L + E D + S
Sbjct: 19 LVLLLLQWMRHHTAAFEERR-FPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQS 77
Query: 1015 LEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDL--------HR 1066
LE A + + P + W +L + ER+ +L + +
Sbjct: 78 LEGAVQAGQLKVPPG-----YHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTK 132
Query: 1067 FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGE 1126
+ + L + + S+ L A K+ + + ++D + + + +
Sbjct: 133 LQMEAGLAEEQLNQADALLQSD---VRLLAAGKVPQRAGEVERDLDKADSMIRLLFNDVQ 189
Query: 1127 KVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQL 1167
+ PQ + R+ L + + R +
Sbjct: 190 TLKDG----RHPQGEQMYRRVYRLHKRLVAIRTEYNLRLKA 226
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin,
ankyrin-binding domain, actin capping, AC binding,
cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB:
3f57_A
Length = 218
Score = 183 bits (466), Expect = 2e-52
Identities = 116/216 (53%), Positives = 156/216 (72%)
Query: 1703 LFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVN 1762
LF L RE DDLEQWI+E+E+VA S E+GQD+DHVTLL ++F++F R+T AIG ERV VN
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 1763 GIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILG 1822
++LI AGHS++ATIAEWKDGLNE W DLLELI+TR Q+L AS +LH++F+ +ILG
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 1823 RISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKA 1882
I EKH + +++G DA + + R H F ++L L QVQQ + + +LQ +YAGEKA
Sbjct: 123 LIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKA 182
Query: 1883 KEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK 1918
+ I N+E EV AW +L +AC R+ +L DT D F+
Sbjct: 183 EAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 132 bits (333), Expect = 1e-34
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 4/219 (1%)
Query: 850 SLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANAS-RVAVV 908
SL++L E D ++QWI EK+ + ++ G+D + V +++ ++ F +E A RV V
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 909 NQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETV 968
N +L+ H + I ++ LN WA L E + + L +++ + + E +
Sbjct: 62 NAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEIL 121
Query: 969 SWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP- 1027
I++K R L + + +D + + R + ER+L + ++ + A ++ +
Sbjct: 122 GLIDEKHREL--PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAG 179
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHR 1066
E+AEAI+ + +++ W+ L R +L + D R
Sbjct: 180 EKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 126 bits (318), Expect = 1e-32
Identities = 52/215 (24%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 1492 YQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN-HEPRINLICN 1550
+Q +R+ +D + WI+EK A S E G +V +L+ K + A+E + R++ +
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 63
Query: 1551 NGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESW 1610
+LID GH ++A + L + W L + +D R L S +Y + +E
Sbjct: 64 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGL 123
Query: 1611 MSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPE-S 1669
+ E+ + ED G D + ++ + H E + ++Q + A +L + E +
Sbjct: 124 IDEKHR-ELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKA 182
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF 1704
+ I K+ +V + L D RR +L + F
Sbjct: 183 EAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217
Score = 123 bits (310), Expect = 1e-31
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 640 LWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA-HESQLMSVI 698
L+QL + D E WI EKE + S+ ++G D + LL K + E A + ++ +V
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 699 AVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDI 758
A + L++ H A I MW +LL+L R + L + D H++F ++
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 759 WMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQ--DKE 816
+ + R + EDVG D + +S + H EL ++ ++ A++L ++
Sbjct: 123 LIDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 817 SPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYK 853
+ + + + ++ LL+ R+ +L+D ++
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 117 bits (293), Expect = 3e-29
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 7/220 (3%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAY-EERVQAVVTV 482
+ R+ E W+SE + + S G D V K + A +ERV V
Sbjct: 5 QLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAF 64
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSM 542
+ L + + I K+ + +W LLEL+ R L +S L + F IL +
Sbjct: 65 IERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLI 124
Query: 543 EELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFR 602
+E K R L +D G E + H+ E ++++LG +V+ + R E
Sbjct: 125 DE-KHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGE--- 180
Query: 603 PCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQ 642
I + Q++ A+ L+ RR +L ++ ++
Sbjct: 181 --KAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 112 bits (282), Expect = 7e-28
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 9/223 (4%)
Query: 528 LQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGE-RVKSVV 586
L Q +E + + E ++ S + G+ V L K + +G+ RV +V
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 587 QQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWD 646
+R +D + A I E L + +++L++L R L S L + ++
Sbjct: 63 AFIERLIDA------GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT 116
Query: 647 MADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVN 706
A+ I EK + + D+G D +T H A E E+ Q+ V L
Sbjct: 117 GAEILGLIDEKHRELPE-DVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQT 175
Query: 707 QQH-FGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQ 748
A+ I+ + Q+ A WQ LLD A RR +L + D +
Sbjct: 176 AYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 112 bits (280), Expect = 1e-27
Identities = 47/214 (21%), Positives = 83/214 (38%), Gaps = 2/214 (0%)
Query: 1173 NLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEAN-DDKINGV 1231
+L R+ E +S++E V S E + + V L + F A ++++ V
Sbjct: 2 SLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNV 61
Query: 1232 VQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELG 1291
F +RL D H A + + D +N+ E +M+ L LH++ E+
Sbjct: 62 NAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEIL 121
Query: 1292 EWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKP-EL 1350
+ EK ++ A T S H AFE E+ ++ + Q + L E
Sbjct: 122 GLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 1351 AELIGPKISDLGQQFDDLETTTKDKGERLFDSNR 1384
AE I K ++ + L + +L D+
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTAD 215
Score = 110 bits (277), Expect = 4e-27
Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 4/217 (1%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADT-IRQLGE 1656
Q + + E W+SE+EL + G+D L K + +
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNA 63
Query: 1657 TARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQW 1716
+L H E+ IA + +++++A L +L R L + L ++
Sbjct: 64 FIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGL 123
Query: 1717 IAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDS 1776
I E+ ++G D F+R+ +G +V +A +L A +
Sbjct: 124 IDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLG-VQVQQFQDVATRLQTAYAGEK 181
Query: 1777 A-TIAEWKDGLNEAWQDLLELIETRTQMLVASRELHK 1812
A I + ++ AWQ LL+ R LV + + +
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 105 bits (263), Expect = 2e-25
Identities = 33/223 (14%), Positives = 82/223 (36%), Gaps = 7/223 (3%)
Query: 1062 GDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTED-YKK 1120
G L + R+ D + W+++ + +S + L ++ + E ++
Sbjct: 1 GSLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDN 60
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRD 1180
+ + E++ + + E L + W +L ++ + R QLL+ S +L +
Sbjct: 61 VNAFIERLIDAGHSEAAT----IAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYT 116
Query: 1181 AKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLND 1240
+ L+ ++ L ++ ++ E+ + H AF + ++ A RL
Sbjct: 117 GAEILGLIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQT 175
Query: 1241 EDHY-AADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQ 1282
A+ ++ K ++ A + + L D +
Sbjct: 176 AYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 102 bits (254), Expect = 3e-24
Identities = 46/213 (21%), Positives = 87/213 (40%), Gaps = 4/213 (1%)
Query: 746 FHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYAST-IEALR 804
Q + D++ W+ + + SS ++G+D +V L K +D E ++ +
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 805 NQASQLGDQD-KESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQ 863
+L D E+ + E + + +LLEL R Q L + L++ F +
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 864 WIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHP-N 922
I EK R L V G D E + F++E++ +V +A +L
Sbjct: 123 LIDEKHRELPEDV-GLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 923 SEQIVTRQNQLNHDWAGLREKAEGKRDELNSAH 955
+E I ++ +++ W L + G+R +L
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTA 214
Score = 98.2 bits (244), Expect = 8e-23
Identities = 34/213 (15%), Positives = 80/213 (37%), Gaps = 3/213 (1%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQM-AVKAKQVSELETQAE 1447
+ DD++ W++E E + + G D V +L K + + A+ ++V + E
Sbjct: 7 KRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIE 66
Query: 1448 ILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAE 1507
L + I K + + + + E + R + L + +++ + I E
Sbjct: 67 RLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILGLIDE 126
Query: 1508 KLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAE-F 1566
K + G + + + +E+ ++ + +L + AE
Sbjct: 127 KHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAI 185
Query: 1567 TSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQ 1599
+ +++ WQ L A RR++L+ + +
Sbjct: 186 QNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 93.9 bits (233), Expect = 2e-21
Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 15/230 (6%)
Query: 302 IHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLE 361
+ + + T DL +WI E + V +F ++ N+
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 362 VLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQL 421
+ L + + +N+ W L + R L
Sbjct: 63 AFIERL-----IDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLH------ 111
Query: 422 AARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVT 481
R+ + + E R + +D G D E+ + H A E ++ +VQ
Sbjct: 112 --RYFYTGAEILGLIDEKHRELPED-VGLDASTAESFHRVHTAFERELHLLGVQVQQFQD 168
Query: 482 VSQELEAEKYHD-IDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQ 530
V+ L+ + + I +++ V W LL+ RR +L + +
Sbjct: 169 VATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 92.0 bits (228), Expect = 1e-20
Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 6/219 (2%)
Query: 958 QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQ-AKLDSLE 1016
E + WI +K+ + S + + D + L+ + R+ AI ++D++
Sbjct: 4 FQLKRETDDLEQWISEKELVASSPE-MGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 1017 AEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQV 1076
A + EA I E + +W L +++ R L + DLHR+
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 1077 WLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHD 1136
+ + ++ ED + AE H A E+ ++ D ++ +
Sbjct: 123 LIDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 1137 DPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQ 1175
++ + + + W+ L R+ L + +
Sbjct: 182 AEA---IQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217
Score = 90.8 bits (225), Expect = 3e-20
Identities = 41/217 (18%), Positives = 83/217 (38%), Gaps = 4/217 (1%)
Query: 1280 LHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEI-ASNKDRLLRVQ 1337
L Q ++ ++L +W+ EK+ A + V + + F E A ++R+ V
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 1338 QSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDS 1397
L+ A I L + + DL + + L S T +I
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 1398 WMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVP-DK 1456
++E +++ ED G D ++ + E ++ + QV + + A LQ +K
Sbjct: 123 LIDEKHREL-PEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 1457 MEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQ 1493
E I K+ V ++ + + R+ L + ++
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 90.1 bits (223), Expect = 5e-20
Identities = 43/217 (19%), Positives = 80/217 (36%), Gaps = 3/217 (1%)
Query: 1810 LHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICN 1868
L + + D+ ISEK A S E+G+D V L+ K ++F ++ + + N
Sbjct: 3 LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVN 62
Query: 1869 ESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLML 1928
+ +A I + + WA L D R Q L + DL ++ ++
Sbjct: 63 AFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEILG 122
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHY-A 1987
+D+ R++ + D S E H + + E+ + L +
Sbjct: 123 LIDEKHRELP-EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEK 181
Query: 1988 SNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQ 2024
+ I+ K +S ALL R L + ++
Sbjct: 182 AEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKFR 218
Score = 81.2 bits (200), Expect = 5e-17
Identities = 34/196 (17%), Positives = 73/196 (37%), Gaps = 2/196 (1%)
Query: 1914 GDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEID-TREDNFTA 1972
G LF+ L W+ + ++ E +D V LL + + E ++
Sbjct: 1 GSLFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDN 60
Query: 1973 CISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVA 2032
+ + L+ H + I E GL+ LL + R + L +++++ A
Sbjct: 61 VNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFYTGAEI 120
Query: 2033 EAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNK 2092
+ + + ++GL E+ + H AFE+ + + + T
Sbjct: 121 LGLIDEKHR-ELPEDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAG 179
Query: 2093 RKEEEERKRQEELAAK 2108
K E + +++E++A
Sbjct: 180 EKAEAIQNKEQEVSAA 195
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome;
2.95A {Homo sapiens}
Length = 450
Score = 182 bits (463), Expect = 2e-49
Identities = 71/523 (13%), Positives = 158/523 (30%), Gaps = 96/523 (18%)
Query: 538 ILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEET 597
L M + + + +G L VE + H + I ++ + +
Sbjct: 14 CLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREK----- 68
Query: 598 NEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEK 657
+ QLE+ Y L+K + ER L + L + + E WI +
Sbjct: 69 -------------SAIYQLEEEYENLLKASFERMDHLRQ---LQNIIQATSREIMWINDC 112
Query: 658 EQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRG 717
E+ D T I +++ E +L + D+LV QH +D+I
Sbjct: 113 EEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEA 172
Query: 718 RLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEA 777
+ W +L + L+E + QFF +A + ++ + +
Sbjct: 173 YMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNM 232
Query: 778 NVQSL---LKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKEL 834
+Q L +K+ + E++ Y ++ L N++ ++ +P+
Sbjct: 233 PLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDY-------------- 278
Query: 835 LELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGF 894
R + + +L D + + + H+ D
Sbjct: 279 ------RSNKPIILRALC---------------------------DYKQDQKIVHKGDEC 305
Query: 895 DKEMNANASRVAVVNQLARQL------LHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKR 948
+ N S+ V + L + PN V ++ + +
Sbjct: 306 ILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPL-AVDLSCKIEQYYEAILALWNQLY 364
Query: 949 DELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAI 1008
+ S I+ + + K + ++ D ++ +A +
Sbjct: 365 INMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMK------------------TIADL 406
Query: 1009 QAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQML 1051
+ + E ++ I+ + + ++ L L
Sbjct: 407 ELHYQEFIRNSQGSEMFGDDDKRKIQSQFTDAQKHYQTLVIQL 449
Score = 157 bits (399), Expect = 5e-41
Identities = 38/294 (12%), Positives = 103/294 (35%), Gaps = 18/294 (6%)
Query: 1393 DDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKT 1452
+ WM + +++ G DLASV + + I + Q+ +++
Sbjct: 12 SECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSA- 70
Query: 1453 VPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSA 1512
+E+ +E + + R L + + E +WI +
Sbjct: 71 -----------IYQLEEEYENLLKASFERMDHLR---QLQNIIQATSREIMWINDCEEEE 116
Query: 1513 KSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIED 1572
++ + N+ ++ +++ E +N + +L+ H S + + ++
Sbjct: 117 LLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDT 176
Query: 1573 LMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQN 1632
L +W + + L ++ Q+ +A E+++ + + + + Q+
Sbjct: 177 LQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQH 236
Query: 1633 L---MKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLY 1683
L +K+ E + +Y ++ L ++++ D + K + L
Sbjct: 237 LLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALC 290
Score = 124 bits (312), Expect = 9e-30
Identities = 68/500 (13%), Positives = 158/500 (31%), Gaps = 61/500 (12%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
+ SE WM +Q M + G D S + + H + ++ DY + ++
Sbjct: 5 EFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKAD 64
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWI 1717
R+ + Q+++ Y L + ER L + + + WI
Sbjct: 65 LREKS------------AIYQLEEEYENLLKASFERMDHLRQLQNII---QATSREIMWI 109
Query: 1718 AEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSA 1777
+ E ++ ++ E F E + + + +DQL+ H S
Sbjct: 110 NDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEV-KEKELNKLKQESDQLVLNQHPASD 168
Query: 1778 TIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM-SDELG 1836
I + D L W +L++ + L + +FF + + + ++
Sbjct: 169 KIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPC 228
Query: 1837 RDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAW 1896
+ L + + E + + + + + N+ ++V
Sbjct: 229 DKNMPLQHLLEQIKEL----------------EKEREKILEYKRQVQNLVNKSKKIVQLK 272
Query: 1897 ASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNH 1956
+ + I++R L + +Q D +L +N+
Sbjct: 273 PRNPDYRSNKP-------------IILRALCDY-----KQDQKIVHKGDEC---ILKDNN 311
Query: 1957 QSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENL 2016
+ K + S+G + N + + A+L W + + N+
Sbjct: 312 ERSKWYVTGPGGVDMLVPSVGLIIPPPN----PLAVDLSCKIEQYYEAILALWNQLYINM 367
Query: 2017 QLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERF 2076
+ ++ + D A IA+ L +M + + +L ++ F +++ E
Sbjct: 368 KSLVSWHYCMIDIEKIRAMTIAK---LKTMRQEDYMKTIADLELHYQEFIRNSQGSEMFG 424
Query: 2077 SALERLTTFELKELNKRKEE 2096
+R + + K +
Sbjct: 425 DDDKRKIQSQFTDAQKHYQT 444
Score = 122 bits (306), Expect = 5e-29
Identities = 42/283 (14%), Positives = 96/283 (33%), Gaps = 17/283 (6%)
Query: 1489 KEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLI 1548
+ + W+ ++ +G L +V ++ + I ++ +++ I
Sbjct: 2 GWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKI 61
Query: 1549 CNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAE 1608
+ R+ S I L + ++ L KA ER L + Q + S
Sbjct: 62 KADLREK------------SAIYQLEEEYENLLKASFERMDHL---RQLQNIIQATSREI 106
Query: 1609 SWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPE 1668
W+++ E ++ D + + +E + +L + + QL HP
Sbjct: 107 MWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPA 166
Query: 1669 SDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHE 1728
SD+I + ++ + + L E F E E ++ +
Sbjct: 167 SDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKY 226
Query: 1729 LGQDYDHVTLLWERFKEFDRDTEAIGT--ERVAAVNGIADQLI 1769
+ L E+ KE +++ E I +V + + +++
Sbjct: 227 PCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIV 269
Score = 121 bits (305), Expect = 6e-29
Identities = 55/465 (11%), Positives = 141/465 (30%), Gaps = 66/465 (14%)
Query: 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKK 1120
+G W+ + + ++ LA E+ +N H+ I I +Y K
Sbjct: 1 SGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDK 60
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRD 1180
+ + + + L + +E L K R L Q LQ +
Sbjct: 61 IKADLRE----------------KSAIYQLEEEYENLLKASFERMDHLRQ---LQNIIQA 101
Query: 1181 AKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLND 1240
+ + ++ E + + + ++ +E + ++N + Q +D+L
Sbjct: 102 TSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVL 161
Query: 1241 EDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFT 1300
H A+DK++ D + + + + LK+ QF ++ + +++ + +
Sbjct: 162 NQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDS 221
Query: 1301 AQDETY----RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGP 1356
+ + + + + + +I K ++ + ++++ KP +
Sbjct: 222 IRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYR-- 279
Query: 1357 KISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLA 1416
+ L K ++ + I + ++ W
Sbjct: 280 -----SNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKW------------------ 316
Query: 1417 SVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKE 1476
++ + +P V +EQ +E I
Sbjct: 317 ------------------YVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAILA 358
Query: 1477 PLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSL 1521
++ + DIE + KL + + +Y ++
Sbjct: 359 LWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTI 403
Score = 117 bits (293), Expect = 2e-27
Identities = 43/305 (14%), Positives = 103/305 (33%), Gaps = 21/305 (6%)
Query: 1807 SRELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQ 1865
S H + LG + ++ M G D SV H+ + + Q+ +
Sbjct: 1 SGWDEFTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDK 60
Query: 1866 ICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRT 1925
I + + ++ + +L A R L L +
Sbjct: 61 IKADLREKS-------------AIYQLEEEYENLLKASFERMDHLRQ---LQNIIQATSR 104
Query: 1926 LMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNH 1985
++W++D + + + + + ++++ +E +L+ H
Sbjct: 105 EIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQH 164
Query: 1986 YASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMS 2045
AS++I+ + L Q + +L + +L+ +QF +A EA+L + +
Sbjct: 165 PASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRK 224
Query: 2046 MELG---LTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQ 2102
+ + + IK+ E + + + + L + ++ +L R + +
Sbjct: 225 KYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSK-KIVQLKPRNPDYRSNKP 283
Query: 2103 EELAA 2107
L A
Sbjct: 284 IILRA 288
Score = 108 bits (270), Expect = 2e-24
Identities = 51/374 (13%), Positives = 125/374 (33%), Gaps = 20/374 (5%)
Query: 863 QWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPN 922
W+ ++ + + G D+ VE + + G + ++ +
Sbjct: 16 GWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKA------------ 63
Query: 923 SEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTD 982
+ + QL ++ L + + + D L + WI D + D
Sbjct: 64 DLREKSAIYQLEEEYENLLKASFERMDHLRQLQ---NIIQATSREIMWINDCEEEELLYD 120
Query: 983 SLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRI 1042
T I Q S L + +L+ L+ E+ + ++ I + ++
Sbjct: 121 -WSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQT 179
Query: 1043 IWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTP---SSLADAEK 1099
W + Q+ K D L+E +F + + +L Q + + L +
Sbjct: 180 QWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLE 239
Query: 1100 LLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHK 1159
+ + + RE+I Y + +++ +K+ + D + L+AL D ++
Sbjct: 240 QIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSN-KPIILRALCDYKQDQKI 298
Query: 1160 MWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLT 1219
+ + + +L + + +L ++ P+ ++ + + +EA L
Sbjct: 299 VHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYEAILA 358
Query: 1220 TMEANDDKINGVVQ 1233
+ +V
Sbjct: 359 LWNQLYINMKSLVS 372
Score = 105 bits (264), Expect = 1e-23
Identities = 59/481 (12%), Positives = 153/481 (31%), Gaps = 81/481 (16%)
Query: 308 LTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEVLLFTL 367
+TS+ L W+++ A + + L V+Q + + +
Sbjct: 10 VTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRG---------------IHNSIGDY 54
Query: 368 QSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARFNR 427
+ ++ +E I + + +E L KA ER + L QL +
Sbjct: 55 RWQLDKIKA---DLREKSAIYQLEEEYENLLKASFER----------MDHLRQLQ-NIIQ 100
Query: 428 KASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELE 487
S W+++ + ++ + + + + E+ + + S +L
Sbjct: 101 ATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLV 160
Query: 488 AEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSMEELKM 547
++ D+I A + + W+++L++ K + L+ + Q F+E ++ L+
Sbjct: 161 LNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQD 220
Query: 548 RLLSDDYGKH---LMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPC 604
+ L + + +++ I +V+++V +S++ + + P
Sbjct: 221 SIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPR---NPD 277
Query: 605 DPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTG 664
+ ++ L D K+ ++IV G
Sbjct: 278 YRSNKPIILRALCDY-----------------------------------KQDQKIVHKG 302
Query: 665 DIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMA 724
D S + + V+ + +I + +A
Sbjct: 303 DECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDL----SCKIEQYYEAILA 358
Query: 725 MWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLK 784
+W ++ V +H D + + ++ + ED + A+++ +
Sbjct: 359 LWNQ-------LYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIADLELHYQ 411
Query: 785 K 785
+
Sbjct: 412 E 412
Score = 104 bits (260), Expect = 4e-23
Identities = 46/473 (9%), Positives = 156/473 (32%), Gaps = 61/473 (12%)
Query: 1282 QFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSG 1340
E W+++++ + +V H+ I + +L +++
Sbjct: 6 FTKHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADL 65
Query: 1341 SELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMN 1400
E I L +++++L + ++ + L + I Q W+N
Sbjct: 66 REK------------SAIYQLEEEYENLLKASFERMDHL---RQLQNIIQATSREIMWIN 110
Query: 1401 ELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEI 1460
+ E++ D ++ + + +Q+ VK K++++L+ +++ L ++I
Sbjct: 111 DCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKI 170
Query: 1461 VVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNS 1520
++ ++ I + L++ +QF + + + ++ S + +
Sbjct: 171 EAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDK 230
Query: 1521 LFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQL 1580
+ Q L ++I E + E E+ +++L+++ +++
Sbjct: 231 NMPL-------QHLLEQIKELE---------------KEREKILEYKRQVQNLVNKSKKI 268
Query: 1581 KKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETL 1640
+ + L D + + + + + ++ ++ + + +
Sbjct: 269 VQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLV 328
Query: 1641 ELAVEDYADTIRQLGETARQLTSEMHPESDQIAL-KQSQVDKLYAGLKDLAGERRAKLDE 1699
+ P + +A+ ++++ Y + L + +
Sbjct: 329 PSVG-------------------LIIPPPNPLAVDLSCKIEQYYEAILALWNQLYINMKS 369
Query: 1700 ALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEA 1752
+ +++ + + + + L ++EF R+++
Sbjct: 370 LVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIAD---LELHYQEFIRNSQG 419
Score = 44.7 bits (105), Expect = 3e-04
Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 21/213 (9%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
TS + WI + +++ + Q+ F+ + + E
Sbjct: 96 QNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMS--------QLEVKEK 147
Query: 363 LLFTLQSKMRA--NNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQ 420
L L+ + NQ P + K + + W + + ++ L+E
Sbjct: 148 ELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYF----- 202
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFD---LGAVEAAAKKHEAIETDIFAYEERVQ 477
+F +A E +L Q + + L + K+ E I Y+ +VQ
Sbjct: 203 ---QFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQ 259
Query: 478 AVVTVSQELEAEKYHDIDRINARKENVLRLWNY 510
+V S+++ K + D + + + L +Y
Sbjct: 260 NLVNKSKKIVQLKPRNPDYRSNKPIILRALCDY 292
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of
spectrin, alpha helical linker region, 3- helix
coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP:
a.7.1.1 a.7.1.1
Length = 214
Score = 171 bits (436), Expect = 1e-48
Identities = 94/215 (43%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 1065 HRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDY 1124
FL+DLD FQ WL+ TQ VASED P SL +AE+LL QH I++EID + + Y+++ +
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 1125 GEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQA 1184
GEKV + DP+Y+ L +RL+ L GW+ L +MWE+R L+Q L Q F +DAKQA
Sbjct: 63 GEKVIQGQT---DPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQA 119
Query: 1185 EVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHY 1244
E +LS QE+ L+ E P +LE E I++ E FL +ME N DK+ V ++L E +
Sbjct: 120 EAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNL 179
Query: 1245 AADKVKKKADNINDRRNANKERAHQQMETLKDQLQ 1279
+DK+K+K I DR N E+A + L+D L+
Sbjct: 180 YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 128 bits (322), Expect = 3e-33
Identities = 44/211 (20%), Positives = 91/211 (43%), Gaps = 1/211 (0%)
Query: 1493 QFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNG 1552
F +D++D + W++ + S + SL L +++ + EID H+ + +G
Sbjct: 4 AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESG 63
Query: 1553 RKLIDEGHEDSAEFT-SLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWM 1611
K+I + +E L W L + + R L Q Q++ DA +AE+ +
Sbjct: 64 EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAIL 123
Query: 1612 SEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQ 1671
S QE + + + + ++K E ++E+ D + ++ +L +E + SD+
Sbjct: 124 SNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDK 183
Query: 1672 IALKQSQVDKLYAGLKDLAGERRAKLDEALK 1702
I K ++ + + A E L + L+
Sbjct: 184 IKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 126 bits (317), Expect = 1e-32
Identities = 32/219 (14%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 528 LQQSFQEMLYILDS-MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVV 586
++Q+F + L + + + + S+D + L E LLQ+H+ ++ +I+ + + V
Sbjct: 1 MEQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVK 60
Query: 587 QQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWD 646
+ ++ + + + ++ +R++ L+ + L ++ R L + + D
Sbjct: 61 ESGEKVIQGQ-----TDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKD 115
Query: 647 MADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVN 706
E + +E ++ + L + K + ++ + +++S + G++LV
Sbjct: 116 AKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVA 175
Query: 707 QQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVD 745
+ + +D+I+ ++Q + + A L + ++
Sbjct: 176 EGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 122 bits (308), Expect = 3e-31
Identities = 40/210 (19%), Positives = 89/210 (42%), Gaps = 2/210 (0%)
Query: 642 QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVG 701
D+ D + W+ ++ V++ D+ L LL +H ++DEI H+ V G
Sbjct: 4 AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESG 63
Query: 702 DELV-NQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWM 760
++++ Q + RL+ W L + R L + + F +F DA + +
Sbjct: 64 EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAIL 123
Query: 761 LDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPE 819
+ ++ + ++ ++K +D ++N + + + ++L + S +
Sbjct: 124 SNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDK 183
Query: 820 VLERLASIEFRYKELLELAKLRKQRLLDAL 849
+ E++ IE R+++ E A+ L D L
Sbjct: 184 IKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213
Score = 117 bits (294), Expect = 2e-29
Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 2/210 (0%)
Query: 747 HQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQ 806
F D D W+ T + V+SED+ + LL++H + +E+ + + + ++
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 807 ASQL--GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQW 864
++ G D E + +RL ++ + L + + R L L + +A +
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 865 IGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSE 924
+ ++ LA + P +E E +++ F M N +V +L+ + S+
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 925 QIVTRQNQLNHDWAGLREKAEGKRDELNSA 954
+I + + EKA+ L
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 114 bits (286), Expect = 2e-28
Identities = 34/214 (15%), Positives = 88/214 (41%), Gaps = 2/214 (0%)
Query: 1597 AQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGE 1656
Q +L D + ++W+S + + ED + + L+++H ++ ++ + D+ +++ E
Sbjct: 2 EQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKE 61
Query: 1657 TARQLTS-EMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQ 1715
+ ++ + PE + + +D + L + R L + L ++ E
Sbjct: 62 SGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEA 121
Query: 1716 WIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSD 1775
++ +E E + +F++F E ++V + ++L+A G+
Sbjct: 122 ILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNR-DKVLSPVDSGNKLVAEGNLY 180
Query: 1776 SATIAEWKDGLNEAWQDLLELIETRTQMLVASRE 1809
S I E + + + E + + +L + E
Sbjct: 181 SDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 113 bits (283), Expect = 5e-28
Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 2/192 (1%)
Query: 1918 KFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLG 1977
FL + W+ + + + + + E L+ H +K EID +D++ G
Sbjct: 4 AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESG 63
Query: 1978 KELLSRNHYAS-NEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWL 2036
++++ + ++L GL +AL WE R L L +F +DA AEA L
Sbjct: 64 EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAIL 123
Query: 2037 IAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEE 2096
QE L +E +++ E I+K E F S ++ + +L +
Sbjct: 124 SNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGN-KLVAEGNLYSD 182
Query: 2097 EERKRQEELAAK 2108
+ +++ + + +
Sbjct: 183 KIKEKVQLIEDR 194
Score = 108 bits (271), Expect = 2e-26
Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 7/220 (3%)
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
+ F + + WLS Q+ V+ ++ L E ++H I+ +I +++ Q V
Sbjct: 1 MEQAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVK 60
Query: 481 TVSQEL-EAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYIL 539
+++ + + + + R E + W+ L + ++R L L Q+ ++
Sbjct: 61 ESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAE 120
Query: 540 DSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNE 599
+ + L + L E ++K + ++V S V + + E
Sbjct: 121 AILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEG--- 177
Query: 600 GFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK 639
I E+VQ +ED + + + A E L ++ +
Sbjct: 178 ---NLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 108 bits (270), Expect = 2e-26
Identities = 32/207 (15%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAE- 1447
Q DD +W++ +K + +ED L L+Q+ I+ ++ ++ E
Sbjct: 6 LQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEK 65
Query: 1448 ILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAE 1507
++Q + + + ++ ++ + +R L + +F++D + + ++
Sbjct: 66 VIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSN 125
Query: 1508 KLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFT 1567
+ + E +SL +K + ++N+ ++ ++G KL+ EG+ S +
Sbjct: 126 QEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIK 185
Query: 1568 SLIEDLMDRWQQLKKAVDERRSKLIQS 1594
++ + DR ++ + E L +
Sbjct: 186 EKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 103 bits (258), Expect = 9e-25
Identities = 31/212 (14%), Positives = 74/212 (34%), Gaps = 1/212 (0%)
Query: 1811 HKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNE 1869
F D D +S A+ S+++ L ++H ++ Q Q++
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 1870 SAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLW 1929
K+ + + R + W +L ++R L +F +
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1930 MDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASN 1989
+ + + E + E + + ++ D + + G +L++ + S+
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 1990 EIKEKLVGLSNQRNALLHRWEERWENLQLILE 2021
+IKEK+ + ++ + +E L+ LE
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 99 bits (249), Expect = 2e-23
Identities = 37/216 (17%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 958 QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
Q F + + +W+ ++ + S D + L L ++ +G++ ++ Q ++
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASED-MPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKE 61
Query: 1018 EAVA-IEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQV 1076
I+ + E + +R++ + W+ L +M + R L + F +D +
Sbjct: 62 SGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEA 121
Query: 1077 WLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHD 1136
L+ + +A + P SL AE + + + ++N + +D G K+ AE
Sbjct: 122 ILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAE----G 177
Query: 1137 DPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSL 1172
+ ++E+++ + D + ++ + LL +L
Sbjct: 178 NLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213
Score = 99.6 bits (248), Expect = 2e-23
Identities = 33/210 (15%), Positives = 86/210 (40%), Gaps = 2/210 (0%)
Query: 1175 QMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQF 1234
Q F +D + LS + ++ ++ P +L + E L+++H ++ + D V +
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 1235 ADRLNDEDHYAA-DKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEW 1293
+++ + ++ + ++ +A + TL L +F +D ++
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1294 VQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAE 1352
+ + A E S + + + + F + +N+D++L SG++L+ E ++
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 1353 LIGPKISDLGQQFDDLETTTKDKGERLFDS 1382
I K+ + + ++ L D+
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 98.4 bits (245), Expect = 6e-23
Identities = 29/210 (13%), Positives = 76/210 (36%), Gaps = 2/210 (0%)
Query: 853 KLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLA 912
+ D Q W+ + +A+ + + + E + ++ G E++ + V +
Sbjct: 4 AFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESG 63
Query: 913 RQLLHVEH-PNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWI 971
+++ + P + R L+ W L E + L G Q F + ++ + +
Sbjct: 64 EKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAIL 123
Query: 972 EDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAE 1031
+++ L + + L R+ + + K+ S + E ++
Sbjct: 124 SNQEYTLAHLEPPD-SLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 1032 AIRERIKQIRIIWEQLTQMLKERDAKLEEA 1061
I+E+++ I + + +E L +
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRDN 212
Score = 91.1 bits (226), Expect = 2e-20
Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 2/209 (0%)
Query: 1281 HQFLQDCEELGEWVQEKKFT-AQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQS 1339
FLQD ++ W+ + A ++ S +H + EI ++D RV++S
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKES 62
Query: 1340 GSELMKEKPELA-ELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSW 1398
G ++++ + + L+G ++ L +D L + + L + ++
Sbjct: 63 GEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAI 122
Query: 1399 MNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKME 1458
++ E + + + L + ++K + M +V L +
Sbjct: 123 LSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSD 182
Query: 1459 EIVVKKSAVEQRFEKIKEPLLARQRALEK 1487
+I K +E R K E L
Sbjct: 183 KIKEKVQLIEDRHRKNNEKAQEASVLLRD 211
Score = 91.1 bits (226), Expect = 2e-20
Identities = 39/225 (17%), Positives = 74/225 (32%), Gaps = 13/225 (5%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
+ D W+ T ++ SL +Q L Q + + +
Sbjct: 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKD-----EIDGHQDSYQ 57
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
+ K+ P G+ + ++ W+ L + R L + L QE
Sbjct: 58 RVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQE------ 111
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTV 482
F + A E LS + ++ L A EA +K E + ++V + V
Sbjct: 112 --FQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDS 169
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQ 527
+L AE D+I + + + E + + L +L+
Sbjct: 170 GNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNLE 214
Score = 89.2 bits (221), Expect = 8e-20
Identities = 30/208 (14%), Positives = 74/208 (35%), Gaps = 4/208 (1%)
Query: 1707 NREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIAD 1766
+++DD + W++ + S ++ + L ++ + + + V +
Sbjct: 6 LQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDG-HQDSYQRVKESGE 64
Query: 1767 QLIAA-GHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRIS 1825
++I + + + +GL+ W L + E+R+ L +F D K +S
Sbjct: 65 KVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILS 124
Query: 1826 EKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKE 1884
+ + + E + RK ++FL ++ + +V + KL A + +
Sbjct: 125 NQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAE-GNLYSDK 183
Query: 1885 ITNREAEVVNAWASLQNACDARKQKLGD 1912
I + + + L D
Sbjct: 184 IKEKVQLIEDRHRKNNEKAQEASVLLRD 211
>2yrn_A Neuron navigator 2 isoform 4; calponin homolgy domain, helicase,
all alpha, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 129
Score = 159 bits (405), Expect = 2e-45
Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 41 SRIKALADERESVQKKTFQKWVNSHLVRVSCR--IGDLYVDLRDGKMLLKLLEVLSGERL 98
S + QK+ + W N +L + + I DL D+ DG +L ++++V++ E++
Sbjct: 6 SGKRKPVIHGLEDQKRIYTDWANHYLAKSGHKRLIRDLQQDVTDGVLLAQIIQVVANEKI 65
Query: 99 PRPTK-GKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQI 157
K R +EN+D L FL + ++++ + + +I +GN + LGL +++ Q
Sbjct: 66 EDINGCPKNRSQMIENIDACLNFLAAKGINIQGLSAEEIRNGNLKAILGLFFSLSRYKQQ 125
Query: 158 Q 158
Q
Sbjct: 126 Q 126
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil,
contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1
a.7.1.1
Length = 250
Score = 164 bits (416), Expect = 2e-45
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 10/245 (4%)
Query: 410 EELIRQEKLEQLAARFNRKASMRETWLSE-NQRLVSQDNFGFDLGAVEAAAKKHEAIETD 468
E+ R E+LE LA +F +KAS ETW Q L+ +D L V A +KHEA E+D
Sbjct: 4 NEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESD 63
Query: 469 IFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQL 528
+ A+++RV+ + ++QEL YHD +N R + + W+ L L + RR LE +L
Sbjct: 64 LAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 123
Query: 529 QQSFQEMLY--------ILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGE 580
++ ++ + ME L + ++ L+ H +A +
Sbjct: 124 LETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADG 183
Query: 581 RVKSVVQQSQRFLD-EETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK 639
+S++ ++ + +L + ++ +L R L+E
Sbjct: 184 ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 243
Query: 640 LWQLY 644
Sbjct: 244 RQHAN 248
Score = 116 bits (291), Expect = 1e-28
Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 18/243 (7%)
Query: 627 AVERRARLEESRKLWQLY-WDMADEENWIKEKEQIVSTGD-IGHDLTTINLLLSKHKALE 684
+ RLE L + + + E W KEQI+ D LT + LL KH+A E
Sbjct: 2 SSNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFE 61
Query: 685 DEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAV 744
++ AH+ ++ + A+ EL + A + R Q W L L RR+ LE
Sbjct: 62 SDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERME 121
Query: 745 DFHQ--------FFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNY 796
+ F A + WM + + + +QSL+ H+ L
Sbjct: 122 KLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEA 181
Query: 797 ASTIEALRNQASQL--------GDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDA 848
+++ +++ +P + + ++ ++ +L +R Q L +
Sbjct: 182 DGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEE 241
Query: 849 LSL 851
L+
Sbjct: 242 LAR 244
Score = 105 bits (263), Expect = 4e-25
Identities = 45/232 (19%), Positives = 91/232 (39%), Gaps = 11/232 (4%)
Query: 958 QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
+ F + +W K++IL D LT + L R+ E DLAA Q +++ + A
Sbjct: 17 EKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAA 76
Query: 1018 EAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHR--------FLR 1069
A + + +A + +R ++I W++L + ++R LE L F +
Sbjct: 77 IAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAK 136
Query: 1070 DLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVT 1129
F W+ D+ S+ + + L+ H+ + + + + +M +V
Sbjct: 137 RAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVE 196
Query: 1130 A---EPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFN 1178
+ + + LR W+++ ++ R Q L + L Q N
Sbjct: 197 KVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHAN 248
Score = 103 bits (257), Expect = 3e-24
Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 18/245 (7%)
Query: 1479 LARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEY-GNSLFNVHMLKKKNQSLAKE 1537
+ R LE A +FR+ + W K +Y SL V L +K+++ +
Sbjct: 6 IRRLERLEH--LAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESD 63
Query: 1538 IDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKA 1597
+ H+ R+ I ++L + + D+ + + D+W +L +RR L + EK
Sbjct: 64 LAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 123
Query: 1598 QQYL--------FDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYAD 1649
+ + A+ +WM + Q+L+ HE + + +
Sbjct: 124 LETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADG 183
Query: 1650 TIRQLGETARQLTS-------EMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALK 1702
+ + ++ + + + ++ + +K L R L E L
Sbjct: 184 ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA 243
Query: 1703 LFMLN 1707
N
Sbjct: 244 RQHAN 248
Score = 94.7 bits (235), Expect = 2e-21
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 23/248 (9%)
Query: 520 MRLESSLQLQQSFQEMLYILDS-MEELKMRLLSDDY-GKHLMGVEDLLQKHSLVEADINV 577
RLE L + F++ ++ + LL DY L V LL+KH E+D+
Sbjct: 7 RRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAA 66
Query: 578 LGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
+RV+ + +Q + + D + +R Q++ D + L L +RR LE
Sbjct: 67 HQDRVEQIAAIAQELNELD------YHDAVNVNDRCQKICDQWDRLGTLTQKRREALERM 120
Query: 638 RKLWQLY--------WDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQA 689
KL + A NW++ + + I H + I L++ H+ + +
Sbjct: 121 EKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPE 180
Query: 690 HESQLMSVIAVGDELVNQQHFGADR-------IRGRLQDTMAMWQNLLDLAAFRRKRLEE 742
+ + S++A+ +E+ R + + W + L R + L+E
Sbjct: 181 ADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQE 240
Query: 743 AVDFHQFF 750
+
Sbjct: 241 ELARQHAN 248
Score = 94.7 bits (235), Expect = 3e-21
Identities = 39/247 (15%), Positives = 80/247 (32%), Gaps = 15/247 (6%)
Query: 1583 AVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVED-RGKDEISTQNLMKKHETLE 1641
+ +E R A+++ AS E+W +E ++ +D + L++KHE E
Sbjct: 2 SSNEIRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFE 61
Query: 1642 LAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
+ + D + Q+ A++L + ++ + + ++ + L L +RR L+
Sbjct: 62 SDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERME 121
Query: 1702 KLF--------MLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAI 1753
KL + W+ + + + L ++F
Sbjct: 122 KLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEA 181
Query: 1754 GTER------VAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVAS 1807
ER V + S + D L W + +L+ R Q L
Sbjct: 182 DGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEE 241
Query: 1808 RELHKFF 1814
Sbjct: 242 LARQHAN 248
Score = 88.2 bits (218), Expect = 4e-19
Identities = 38/243 (15%), Positives = 86/243 (35%), Gaps = 19/243 (7%)
Query: 736 RRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSED-VGRDEANVQSLLKKHKDVTEELK 794
R +RLE +F A + W +++ +D V++LL+KH+ +L
Sbjct: 8 RLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLA 65
Query: 795 NYASTIEALRNQASQLGDQD-KESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYK 853
+ +E + A +L + D ++ V +R I ++ L L + R++ L L +
Sbjct: 66 AHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLE 125
Query: 854 LFSE--------ADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRV 905
+ A W+ L M IE+++ + ++ F +
Sbjct: 126 TIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGER 185
Query: 906 AVVNQLARQLLHV-------EHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQ 958
+ + ++ V ++ ++L W +++ + L Q
Sbjct: 186 QSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQ 245
Query: 959 TFH 961
+
Sbjct: 246 HAN 248
Score = 85.5 bits (211), Expect = 4e-18
Identities = 30/228 (13%), Positives = 81/228 (35%), Gaps = 16/228 (7%)
Query: 1389 HQTCDDIDSWMNELEKQIENED-TGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAE 1447
Q ++W E+ + +D + L V L++K + E+ +A +V ++ A+
Sbjct: 20 RQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQ 79
Query: 1448 ILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQ--------FRRDIE 1499
L + + + + +++++ R+ ALE+ ++ + F +
Sbjct: 80 ELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAA 139
Query: 1500 DEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLID-- 1557
W+ + + +S+ + L ++ + + I ++
Sbjct: 140 PFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVI 199
Query: 1558 -----EGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQY 1600
+ T +++L +W ++K+ V R L + Q
Sbjct: 200 QSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Score = 85.5 bits (211), Expect = 4e-18
Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 19/235 (8%)
Query: 1692 ERRAKLDEALKLFMLNREVDDLEQWIAERE-VVAGSHELGQDYDHVTLLWERFKEFDRDT 1750
R +L+ + F ++ E W +E ++ V L + + F+ D
Sbjct: 7 RRLERLEHLAEKF--RQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDL 64
Query: 1751 EAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASREL 1810
A +RV + IA +L + D+ + + + + W L L + R + L +L
Sbjct: 65 AAHQ-DRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL 123
Query: 1811 HKFFHDCKDILGRISE---------KHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQS 1861
+ + + + + +L H+ F L
Sbjct: 124 LETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADG 183
Query: 1862 QVQQICNESAKLQ------ASYAGEKAKEITNREAEVVNAWASLQNACDARKQKL 1910
+ Q I +++ T E+ W ++ R Q L
Sbjct: 184 ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSL 238
Score = 84.0 bits (207), Expect = 1e-17
Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 24/246 (9%)
Query: 1154 WEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSK-DETPVNLEQVENLIK 1212
E+ R + L + F + A E +E +L + D +L +V L++
Sbjct: 3 SNEIR-----RLERLEHLA--EKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLR 55
Query: 1213 RHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQME 1272
+HEAF + + A+ D++ + A LN+ D++ A V + I D+ + ++ E
Sbjct: 56 KHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRRE 115
Query: 1273 TLKDQLQLHQ--------FLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFE 1323
L+ +L + F + W++ QD S + + S T H+ F+
Sbjct: 116 ALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFK 175
Query: 1324 AEIASNKDRLLRVQQSGSELMK-------EKPELAELIGPKISDLGQQFDDLETTTKDKG 1376
A + + +E+ K + +L ++D ++ +
Sbjct: 176 ATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRD 235
Query: 1377 ERLFDS 1382
+ L +
Sbjct: 236 QSLQEE 241
Score = 79.7 bits (196), Expect = 3e-16
Identities = 37/247 (14%), Positives = 93/247 (37%), Gaps = 22/247 (8%)
Query: 1053 ERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPS-SLADAEKLLNQHQAIREEI 1111
R +LE +F + + W + + +D S SL + LL +H+A ++
Sbjct: 7 RRLERLEHL--AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDL 64
Query: 1112 DNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQS 1171
+ + +++ +++ + D + +R + + D W+ L + + R++ L +
Sbjct: 65 AAHQDRVEQIAAIAQELNEL--DYHDAVN--VNDRCQKICDQWDRLGTLTQKRREALERM 120
Query: 1172 LNLQ--------MFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEA 1223
L F + A + L ++E++++LI HE F T+
Sbjct: 121 EKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPE 180
Query: 1224 NDDKINGVVQFADRL-------NDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKD 1276
D + ++ + + N + D + + + K+ + ++L++
Sbjct: 181 ADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQE 240
Query: 1277 QLQLHQF 1283
+L
Sbjct: 241 ELARQHA 247
Score = 78.9 bits (194), Expect = 7e-16
Identities = 29/175 (16%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 1918 KFLIMVRTLMLWMDDVVRQM-NTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISL 1976
KF T W + + ++ ++ V L+ H++ ++++ +D ++
Sbjct: 18 KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAI 77
Query: 1977 GKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQ--------FARD 2028
+EL +++ + + ++ + +Q + L ++R E L+ + ++ + FA+
Sbjct: 78 AQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKR 137
Query: 2029 AAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLT 2083
AA W+ L M + +I+E+++LI HE F+ + + ++ +
Sbjct: 138 AAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQ 192
Score = 77.4 bits (190), Expect = 2e-15
Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 18/225 (8%)
Query: 1810 LHKFFHDCKDILGRISEKHHAMS--DELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQIC 1867
KF K + D V L RKH+ F DL Q +V+QI
Sbjct: 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIA 75
Query: 1868 NESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFK--------F 1919
+ +L A + +R ++ + W L R++ L L + F
Sbjct: 76 AIAQELNELDY-HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEF 134
Query: 1920 LIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKE 1979
WM+ + + + ++ L+ H+ KA + + + +++ E
Sbjct: 135 AKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNE 194
Query: 1980 LLS-------RNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQ 2017
+ R ++ + L + + + R ++LQ
Sbjct: 195 VEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQ 239
Score = 75.5 bits (185), Expect = 1e-14
Identities = 33/238 (13%), Positives = 88/238 (36%), Gaps = 17/238 (7%)
Query: 1275 KDQLQLHQFLQDCEELGEWVQEK--KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDR 1332
+ + +F Q W K +D S V + +H+AFE+++A+++DR
Sbjct: 11 RLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDR 70
Query: 1333 LLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNR-------- 1384
+ ++ EL + A + + + Q+D L T T+ + E L +
Sbjct: 71 VEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQL 130
Query: 1385 EVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELET 1444
+ + ++WM + +++ + + L+ + + + + +
Sbjct: 131 HLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMA 190
Query: 1445 QAEILQKTV-------PDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFR 1495
++K + V + +++K+K+ + R ++L+++
Sbjct: 191 IQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHAN 248
Score = 68.5 bits (167), Expect = 2e-12
Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 7/156 (4%)
Query: 385 KMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARFNRKASMRETWLSENQRLVS 444
I W+RL +R AL E ++QL F ++A+ W+ +
Sbjct: 94 DRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQ 153
Query: 445 QDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEA-------EKYHDIDRI 497
+ +++ HE + + + Q+++ + E+E
Sbjct: 154 DMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYS 213
Query: 498 NARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQ 533
+ + W+ + +L+ R L+ L Q + +
Sbjct: 214 TVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANE 249
Score = 35.8 bits (82), Expect = 0.11
Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Query: 299 DRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNY-RTVEKPPKFVEK 357
D++ E+ + W++ + L D +S+ +Q + + T+ + +
Sbjct: 128 DQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQS 187
Query: 358 GNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEK 417
+ P + ++ W+++++ R+ +L+EEL RQ
Sbjct: 188 IMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHA 247
Query: 418 LEQ 420
E+
Sbjct: 248 NER 250
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex,
three-helix bundle, alpha helix repeat, helical linker,
actin capping; 2.80A {Homo sapiens}
Length = 185
Score = 158 bits (400), Expect = 4e-44
Identities = 103/179 (57%), Positives = 132/179 (73%)
Query: 1911 GDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNF 1970
G T D F+F M R L+ WM+ ++RQ+ T E+ RDVS VELLM HQ + AEI+TR NF
Sbjct: 1 GSTADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNF 60
Query: 1971 TACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAA 2030
+AC+ LG+ LL R H AS EI+EKL + ++R + +WE RWE L+++LEV QF+RDA+
Sbjct: 61 SACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 2031 VAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKE 2089
VAEAWLIAQEPYL S + G T+D VE LIK+HEAFEKS + ERF+ALE+ TT ELKE
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKE 179
Score = 125 bits (316), Expect = 8e-33
Identities = 36/175 (20%), Positives = 84/175 (48%)
Query: 636 ESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLM 695
+ ++ + D +W++ + + T + D++++ LL+ H+ + EI+
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 696 SVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVD 755
+ + +G+ L+ +QH ++ IR +LQ M+ + + + R +RL ++ QF DA
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 756 VDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQL 810
+ W++ ++S D G +V+ L+K+H+ + ++A AL +
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLE 176
Score = 121 bits (305), Expect = 2e-31
Identities = 40/180 (22%), Positives = 77/180 (42%)
Query: 1490 EAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLIC 1549
+ ++F D W+ + ++ E + +V +L K +Q + EI+ +
Sbjct: 5 DKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACL 64
Query: 1550 NNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAES 1609
G L+ H+ S E ++ +M R +++ + + R +L + Q+ DAS AE+
Sbjct: 65 ELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEA 124
Query: 1610 WMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
W+ QE Y+ D G S + L+K+HE E + +A+ L + E
Sbjct: 125 WLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQIAE 184
Score = 118 bits (298), Expect = 2e-30
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Query: 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYK 1119
D RF W+ + +++ P ++ E L+ HQ I EI+ ++++
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 1120 KMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNR 1179
++ GE + + +RE+L+ + +E+++ WE R + L L + F+R
Sbjct: 62 ACLELGESLLQRQHQASEE----IREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSR 117
Query: 1180 DAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLN 1239
DA AE L QE L+ + ++ VE LIKRHEAF + + ++ + +
Sbjct: 118 DASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLEL 177
Query: 1240 DEDHYA 1245
E A
Sbjct: 178 KERQIA 183
Score = 104 bits (262), Expect = 1e-25
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 742 EAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIE 801
D +FF+ A D+ WM +R + +++ RD ++V+ L+K H+ + E++ +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 802 ALRNQASQLGDQDKE-SPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADG 860
A L + + S E+ E+L + R KE+ E + R +RL L + + +A
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 861 VQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEH 920
+ W+ ++ LA+ G ++ VE + R++ F+K + A R A + + L
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQ 181
Query: 921 P 921
Sbjct: 182 I 182
Score = 103 bits (257), Expect = 7e-25
Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 1/184 (0%)
Query: 1593 QSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIR 1652
+ ++ A + SWM + ++R +D S + LMK H+ + +E +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 1653 QLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDD 1712
E L H S++I K QV + + R +L L++ +R+
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 1713 LEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAG 1772
E W+ +E S + G D V L +R + F++ T + ER AA+ +
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWA-ERFAALEKPTTLELKER 180
Query: 1773 HSDS 1776
Sbjct: 181 QIAE 184
Score = 98.4 bits (245), Expect = 3e-23
Identities = 33/187 (17%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 524 SSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVK 583
S+ + F +L ME + ++ + + + + VE L++ H + A+I +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 584 SVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQL 643
+ ++ + L + I E++QQ+ E+ + R RL ++ Q
Sbjct: 62 ACLELGESLLQRQ------HQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQF 115
Query: 644 YWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDE 703
D + E W+ +E +++GD GH + ++ L+ +H+A E + + ++
Sbjct: 116 SRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTL 175
Query: 704 LVNQQHF 710
+ ++
Sbjct: 176 ELKERQI 182
Score = 96.1 bits (239), Expect = 1e-22
Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
Query: 1170 QSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKIN 1229
+ + F A+ + + E P ++ VE L+K H+ +E +
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 1230 GVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEE 1289
++ + L H A++++++K + RR E+ + E L+ L++ QF +D
Sbjct: 62 ACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASV 121
Query: 1290 LGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEK 1347
W+ ++ + + +V RH+AFE AS +R +++ + +KE+
Sbjct: 122 AEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKER 180
Score = 93.1 bits (231), Expect = 2e-21
Identities = 43/175 (24%), Positives = 76/175 (43%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEI 1448
D+ SWM + +QIE ++ D++SV +LM+ Q I ++ ++K S E
Sbjct: 10 FSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGES 69
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEK 1508
L + EEI K V R +++ E AR L E QF RD + W+ +
Sbjct: 70 LLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQ 129
Query: 1509 LPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDS 1563
P S ++G+++ +V L K++++ K + R + + E
Sbjct: 130 EPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQIAE 184
Score = 93.1 bits (231), Expect = 2e-21
Identities = 36/172 (20%), Positives = 70/172 (40%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
RF A +W+ R + D+ +VE K H+ I +I + A + +
Sbjct: 8 RFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELG 67
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSME 543
+ L ++ + I + + V+ + E +AR RL L++ Q ++ +
Sbjct: 68 ESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLI 127
Query: 544 ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDE 595
+ L S D+G + VE L+++H E ER ++ + + L E
Sbjct: 128 AQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKE 179
Score = 91.5 bits (227), Expect = 7e-21
Identities = 31/184 (16%), Positives = 68/184 (36%), Gaps = 2/184 (1%)
Query: 1806 ASRELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQ 1864
++ + +FF +D+L + + + E RD SV L + HQ +++T
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFS 61
Query: 1865 QICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVR 1924
L + ++EI + +V++ + +AR ++L ++ +F
Sbjct: 62 ACLELGESLLQR-QHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 1925 TLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRN 1984
W+ + + + V VE L+ H++ + + + F A L
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKER 180
Query: 1985 HYAS 1988
A
Sbjct: 181 QIAE 184
Score = 89.6 bits (222), Expect = 3e-20
Identities = 32/179 (17%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 953 SAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKL 1012
S F R+ +SW+E R +++ + D++ + L + G+ ++
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQE-RPRDVSSVELLMKYHQGINAEIETRSKNF 60
Query: 1013 DSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLD 1072
+ ++ + + +E IRE+++Q+ +++ + + R +L ++ +F RD
Sbjct: 61 SACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 1073 HFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAE 1131
+ WL + +AS D ++ EKL+ +H+A + ++ E + + E
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKE 179
Score = 88.4 bits (219), Expect = 7e-20
Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 1/175 (0%)
Query: 1278 LQLHQFLQDCEELGEWVQEKKFTAQ-DETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRV 1336
+F +L W++ + E R +V HQ AEI +
Sbjct: 4 ADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSAC 63
Query: 1337 QQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDID 1396
+ G L++ + + +E I K+ + + ++ + + ERL + +
Sbjct: 64 LELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAE 123
Query: 1397 SWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQK 1451
+W+ E + + D G + SV L+++ + E A A++ + LE + K
Sbjct: 124 AWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELK 178
Score = 88.4 bits (219), Expect = 9e-20
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 2/183 (1%)
Query: 848 ALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAV 907
++ FS A + W+ R + T +D+ VE++ + G + E+ + +
Sbjct: 3 TADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSA 62
Query: 908 VNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRET 967
+L LL +H SE+I + Q+ + EK E + + L V F +
Sbjct: 63 CLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVA 122
Query: 968 VSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEA-VAIEKEH 1026
+W+ ++ L S D + + L +R E+ A+ + +LE + +++
Sbjct: 123 EAWLIAQEPYLASGD-FGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQ 181
Query: 1027 PEE 1029
E
Sbjct: 182 IAE 184
Score = 88.0 bits (218), Expect = 1e-19
Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 2/179 (1%)
Query: 1699 EALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERV 1758
F DL W+ + E +D V LL + + + + E ++
Sbjct: 2 STADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIET-RSKNF 60
Query: 1759 AAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCK 1818
+A + + L+ H S I E + +++ E E R + L E+ +F D
Sbjct: 61 SACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDAS 120
Query: 1819 DILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQAS 1876
+ + + S + G SV L ++H+ F + + + + +
Sbjct: 121 VAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKE 179
Score = 56.1 bits (135), Expect = 1e-08
Identities = 36/193 (18%), Positives = 74/193 (38%), Gaps = 18/193 (9%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
+ S+ DLL W++ I + ++ + V+ + +E
Sbjct: 7 FRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGI-----------NAEIET 55
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
+ + ++ + +I E+L++ R+ + R E+L L
Sbjct: 56 RSKNFSACLELGES--LLQRQHQASEEIR---EKLQQVMSRRKEMNEKWEARWERLRMLL 110
Query: 423 A--RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
+F+R AS+ E WL + ++ +FG + +VE K+HEA E ++ ER A+
Sbjct: 111 EVCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALE 170
Query: 481 TVSQELEAEKYHD 493
+ E+
Sbjct: 171 KPTTLELKERQIA 183
Score = 39.5 bits (92), Expect = 0.005
Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 2020 LEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
+ ++F A +W+ + + + E + VE L+K H+ + + FSA
Sbjct: 4 ADKFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSAC 63
Query: 2080 ERLTTFELKELNKRKEEEERKRQEELAAKQ 2109
L L + + EE R++ +++ +++
Sbjct: 64 LELGE-SLLQRQHQASEEIREKLQQVMSRR 92
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical
linker region, 2 tandem 3-helix coiled- coils, structural
protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB:
1aj3_A
Length = 213
Score = 157 bits (398), Expect = 2e-43
Identities = 64/211 (30%), Positives = 106/211 (50%)
Query: 1491 AYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICN 1550
+QF RD++DE+ WI EK S +YG L V L+KK++ L E+ HEP I + +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1551 NGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESW 1610
G+KL D+ E + +D W++LK+ R +L +S + QQ++ + E E+W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1611 MSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESD 1670
++E+ + ED G + Q L+KKHE E + D + + L + + +
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1671 QIALKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
I K + + L+ A +R+AKLDE
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 150 bits (380), Expect = 5e-41
Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 1/210 (0%)
Query: 642 QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVG 701
Q + DM DEE+WIKEK+ +VS+ D G DLT + L KHK LE E+ AHE + SV+ G
Sbjct: 4 QFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTG 63
Query: 702 DELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWML 761
+L + G + I+ RL + W+ L LAA R +RLEE++++ QF A+ + + W+
Sbjct: 64 KKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWIN 123
Query: 762 DTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDK-ESPEV 820
+ + LV+SED G A +Q LLKKH+ + + + + L ++ +
Sbjct: 124 EKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENI 183
Query: 821 LERLASIEFRYKELLELAKLRKQRLLDALS 850
++ ++ + +L + A RK +L + +
Sbjct: 184 TAKMKGLKGKVSDLEKAAAQRKAKLDENSA 213
Score = 125 bits (315), Expect = 2e-32
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
+ +F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q+V+
Sbjct: 1 MVHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVL 60
Query: 481 TVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILD 540
++L + + I R + W L +L AR RLE SL+ QQ +
Sbjct: 61 DTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEA 120
Query: 541 SMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEG 600
+ E + S+DYG L ++ LL+KH E D V +RV V + + +
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKN---- 176
Query: 601 FRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESR 638
I +++ L+ S+L K A +R+A+L+E+
Sbjct: 177 --NHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 124 bits (313), Expect = 4e-32
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 528 LQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQ 587
+ Q F++M ++E K+ + S+DYG+ L GV++L +KH +EA++ ++SV+
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 588 QSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDM 647
++ D+ I +R+ Q D + EL +LA R RLEES + Q ++
Sbjct: 62 TGKKLSDDN------TIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANV 115
Query: 648 ADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQ 707
+EE WI EK +V++ D G L I LL KH+A E + H+ ++ V A G++L+ +
Sbjct: 116 EEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKK 175
Query: 708 QHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEA 743
+ + I +++ +L AA R+ +L+E
Sbjct: 176 NNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 123 bits (310), Expect = 1e-31
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 1/210 (0%)
Query: 747 HQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQ 806
HQFF D D + W+ + LVSSED GRD VQ+L KKHK + EL + I+++ +
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDT 62
Query: 807 ASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWI 865
+L D + E+ +RLA +KEL +LA R QRL ++L + + + + WI
Sbjct: 63 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWI 122
Query: 866 GEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQ 925
EK ++A+ G + ++ + +++ F+ + + RV V L+ + + E
Sbjct: 123 NEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVEN 182
Query: 926 IVTRQNQLNHDWAGLREKAEGKRDELNSAH 955
I + L + L + A ++ +L+
Sbjct: 183 ITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 120 bits (303), Expect = 9e-31
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 1/208 (0%)
Query: 1597 AQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGE 1656
Q+ D + ESW+ E++L + ED G+D QNL KKH+ LE + + I+ + +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1657 TARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQW 1716
T ++L+ + ++I + +Q + LK LA R +L+E+L+ V++ E W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1717 IAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDS 1776
I E+ + S + G + L ++ + F+ D +RV V + LI +
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHK-DRVNDVCANGEDLIKKNNHHV 180
Query: 1777 ATIAEWKDGLNEAWQDLLELIETRTQML 1804
I GL DL + R L
Sbjct: 181 ENITAKMKGLKGKVSDLEKAAAQRKAKL 208
Score = 119 bits (300), Expect = 3e-30
Identities = 47/213 (22%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMD 1123
+H+F RD+D + W+ + + V+SED L + L +H+ + E+ + + ++D
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1124 YGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQ 1183
G+K++ + + + +++RL D W+EL ++ R Q L +SL Q F + ++
Sbjct: 62 TGKKLSDDNTIGKEE----IQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEE 117
Query: 1184 AEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDH 1243
E ++++ +++ ++ L ++ L+K+HEAF T + D++N V + L +++
Sbjct: 118 EEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN 177
Query: 1244 YAADKVKKKADNINDRRNANKERAHQQMETLKD 1276
+ + + K + + + ++ A Q+ L +
Sbjct: 178 HHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
Score = 112 bits (282), Expect = 6e-28
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQ 910
+++ F + D + WI EK ++++ G+D+ V+ ++ ++ + E+ A+ + V
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 911 LARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSW 970
++L E+I R Q W L++ A + L + Q F E +W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 971 IEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEA 1030
I +K ++ S D L I L ++ E D + +++ + A + K++
Sbjct: 122 INEKMTLVASED-YGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHV 180
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEA 1061
E I ++K ++ L + +R AKL+E
Sbjct: 181 ENITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 111 bits (278), Expect = 2e-27
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEI 1448
+ DD +SW+ E + + +ED G DL V L +K + +E ++A + + +
Sbjct: 6 FRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKK 65
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEK 1508
L EEI + + ++++K+ AR + LE+ E QF ++E+E+ WI EK
Sbjct: 66 LSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEK 125
Query: 1509 LPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTS 1568
+ S +YG++L + L KK+++ + H+ R+N +C NG LI + + T+
Sbjct: 126 MTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITA 185
Query: 1569 LIEDLMDRWQQLKKAVDERRSKLIQSE 1595
++ L + L+KA +R++KL ++
Sbjct: 186 KMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 107 bits (269), Expect = 3e-26
Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 1174 LQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQ 1233
+ F RD E + +++ ++S ++ +L V+NL K+H+ + A++ I V+
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1234 FADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEW 1293
+L+D++ ++++++ D K+ A + + L++ L+ QF+ + EE W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1294 VQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAE 1352
+ EK A ++ + + +H+AFE + +KDR+ V +G +L+K+ E
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1353 LIGPKISDLGQQFDDLETTTKDKGERLFDS 1382
I K+ L + DLE + +L ++
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 106 bits (265), Expect = 1e-25
Identities = 47/209 (22%), Positives = 97/209 (46%), Gaps = 2/209 (0%)
Query: 1810 LHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICN 1868
+H+FF D D I EK S++ GRD V L++KH+ +L + +Q + +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1869 ESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLML 1928
KL +EI R A+ V+ W L+ AR Q+L ++ + +F+ V
Sbjct: 62 TGKKLSDDNTIG-KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEA 120
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
W+++ + + + + ++ ++ L+ H++ + + +D + G++L+ +N++
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHV 180
Query: 1989 NEIKEKLVGLSNQRNALLHRWEERWENLQ 2017
I K+ GL + + L +R L
Sbjct: 181 ENITAKMKGLKGKVSDLEKAAAQRKAKLD 209
Score = 103 bits (259), Expect = 6e-25
Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 958 QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
F + + SWI++KK ++ S D DLTG+ L+++ +E +LAA + + S+
Sbjct: 3 HQFFRDMDDEESWIKEKKLLVSSED-YGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1018 EAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVW 1077
+ ++ E I++R+ Q W++L Q+ R +LEE+ + +F+ +++ + W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1078 LTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDD 1137
+ + T VASED +LA + LL +H+A + + + + GE + + ++
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKK----NN 177
Query: 1138 PQYMFLRERLKALRDGWEELHKMWENRQQLLSQSL 1172
+ ++K L+ +L K R+ L ++
Sbjct: 178 HHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212
Score = 103 bits (257), Expect = 1e-24
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 1707 NREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIAD 1766
R++DD E WI E++++ S + G+D V L ++ K + + A + +V
Sbjct: 6 FRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE-PAIQSVLDTGK 64
Query: 1767 QLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISE 1826
+L I + + W++L +L R Q L S E +F + ++ I+E
Sbjct: 65 KLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINE 124
Query: 1827 KHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEI 1885
K + S++ G ++ L +KH+ F D + +V +C L + I
Sbjct: 125 KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH-VENI 183
Query: 1886 TNREAEVVNAWASLQNACDARKQKLGDT 1913
T + + + L+ A RK KL +
Sbjct: 184 TAKMKGLKGKVSDLEKAAAQRKAKLDEN 211
Score = 100 bits (250), Expect = 1e-23
Identities = 49/209 (23%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 1280 LHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQ 1338
+HQF +D ++ W++EKK E Y R V + +H+ EAE+A+++ + V
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1339 SGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSW 1398
+G +L + E I +++ + +L+ +G+RL +S ++ ++W
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 1399 MNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKME 1458
+NE + +ED G LA++ L++K + ET V +V+++ E L K +E
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVE 181
Query: 1459 EIVVKKSAVEQRFEKIKEPLLARQRALEK 1487
I K ++ + +++ R+ L++
Sbjct: 182 NITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
Score = 99 bits (249), Expect = 2e-23
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Query: 1916 LFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACIS 1975
+ +F + W+ + +++ + RD++GV+ L H+ L+AE+ E + +
Sbjct: 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLD 61
Query: 1976 LGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAW 2035
GK+L N EI+++L + L R + L+ LE QF + EAW
Sbjct: 62 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAW 121
Query: 2036 LIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKE 2095
+ + + S + G T+ ++ L+KKHEAFE ++R + + +L + N
Sbjct: 122 INEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGE-DLIKKNNHHV 180
Query: 2096 EEERKRQEELAAK 2108
E + + L K
Sbjct: 181 ENITAKMKGLKGK 193
Score = 91.5 bits (227), Expect = 1e-20
Identities = 46/227 (20%), Positives = 92/227 (40%), Gaps = 16/227 (7%)
Query: 301 MIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNL 360
M+H++ D WI+E + + L GVQ + +
Sbjct: 1 MVHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEA-------ELAAHE 53
Query: 361 EVLLFTLQSKMRANNQKPYTPKE-GKMISDINKAWERLEKAEHERELALREELIRQEKLE 419
+ L + + ++ +E + ++ W+ L++ R L E L Q+
Sbjct: 54 PAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ--- 110
Query: 420 QLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAV 479
F E W++E LV+ +++G L A++ KKHEA ETD +++RV V
Sbjct: 111 -----FVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDV 165
Query: 480 VTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSL 526
++L + H ++ I A+ + + + L + R+ +L+ +
Sbjct: 166 CANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212
>2vzc_A Alpha-parvin; membrane, cytoplasm, cytoskeleton, cell junction,
alternative splicing, calponin homology domain,
actin-binding, cell membrane; 1.05A {Homo sapiens} PDB:
2vzd_A* 2vzg_B* 2vzi_B* 2k2r_A 3kmu_B 3kmw_B* 3rep_B*
Length = 131
Score = 150 bits (381), Expect = 3e-42
Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 38 FERSRIKALAD---ERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLS 94
ER L D ++ +V KKT +VN HL +++ + +L DG L+ L+ +L
Sbjct: 4 HERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLE 63
Query: 95 GERLPRP---TKGKMRIHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTI 151
G +P + NV A + +++ + DIV+ + + +L +++ +
Sbjct: 64 GYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNL 123
Query: 152 ILRFQIQD 159
+++ +
Sbjct: 124 FTKYRNVE 131
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural
prote intermediate filament, crosslinking; 2.95A {Homo
sapiens}
Length = 283
Score = 155 bits (392), Expect = 8e-42
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 3/191 (1%)
Query: 632 ARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHE 691
+ + L E W+ EKE+ D T + + AL E++ E
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 692 SQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFA 751
++ + GD L+ + H + W +L L L+E + QFF+
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 752 DAVDVDIWM---LDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQAS 808
D + + + + +R S D ++ LL+ +D E+L Y + L +A
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 809 QLGDQDKESPE 819
+ P
Sbjct: 182 AVVQLKPRHPA 192
Score = 141 bits (356), Expect = 4e-37
Identities = 31/202 (15%), Positives = 75/202 (37%), Gaps = 3/202 (1%)
Query: 1485 LEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPR 1544
+ + + F E +W+ EK ++ + N+ K+ +L +E++ E +
Sbjct: 4 MRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK 63
Query: 1545 INLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDA 1604
I + N G +L+ E H S L +W + + + L ++ Q+ D
Sbjct: 64 IKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDV 123
Query: 1605 SEAESWMSEQELYMMV---EDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQL 1661
EAE + + + + DR ++L++ + + + +Y + L + A+ +
Sbjct: 124 REAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAV 183
Query: 1662 TSEMHPESDQIALKQSQVDKLY 1683
+ + +
Sbjct: 184 VQLKPRHPAHPMRGRLPLLAVC 205
Score = 100 bits (250), Expect = 6e-23
Identities = 31/203 (15%), Positives = 74/203 (36%), Gaps = 4/203 (1%)
Query: 1908 QKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTRE 1967
+ L F+ ++W+++ + + + + + ++ +L E++ +E
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1968 DNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFAR 2027
+ G LL +H A ++ L Q + +L +L+ +QF
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 2028 DAAVAEAWLIAQEPYLMSM---ELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTT 2084
D AE L + L + T+ +E+L++ + ++ + S L +
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 2085 FELKELNKRKEEEERKRQEELAA 2107
+ +L R + + L A
Sbjct: 182 -AVVQLKPRHPAHPMRGRLPLLA 203
Score = 99.4 bits (247), Expect = 1e-22
Identities = 32/229 (13%), Positives = 70/229 (30%), Gaps = 5/229 (2%)
Query: 843 QRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANA 902
+ SL+ + A W+ EK+ ++ K Y +E+
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 903 SRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHI 962
++ + +LL +HP + + Q L W+ + + L F
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 963 ECRETVSWIEDKKRILQSTDSLEM--DLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAV 1020
+ RE ++ + L+ S + +T + L + + L + L L A
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 1021 AIEKEHPEEAEAIRERIKQIRIIW---EQLTQMLKERDAKLEEAGDLHR 1066
A+ + P + + + + K + +L
Sbjct: 182 AVVQLKPRHPAHPMRGRLPLLAVCDYKQVEVTVHKGDECQLVGPAQPSH 230
Score = 98.6 bits (245), Expect = 2e-22
Identities = 36/235 (15%), Positives = 85/235 (36%), Gaps = 9/235 (3%)
Query: 414 RQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYE 473
LE L F A+ WL+E + ++ + A + + A+ ++ E
Sbjct: 3 HMRSLESLH-SFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 474 ERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQ 533
++++ + L E + + + + + W+++L+L L+ + Q F
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 534 EMLYI---LDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQ 590
++ L ++E R S D + +EDLLQ + +N + + ++++
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 591 RFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES--RKLWQL 643
+ + P P + + D V + +L W++
Sbjct: 182 AVVQLKPR---HPAHPMRGRLPLLAVCDYKQVEVTVHKGDECQLVGPAQPSHWKV 233
Score = 97.8 bits (243), Expect = 4e-22
Identities = 30/220 (13%), Positives = 73/220 (33%), Gaps = 13/220 (5%)
Query: 1695 AKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIG 1754
+ + L W+ E+E + ++T E + R+ E
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1755 TERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFF 1814
+++ + D+L+ H T+ ++ L W +L+L L + +FF
Sbjct: 62 -KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFF 120
Query: 1815 HDCKDILGRISEKHHAM----SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNES 1870
D ++ G++ + A+ S + + L + Q+ + L + + + +
Sbjct: 121 SDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRA 180
Query: 1871 AKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKL 1910
+ A + L CD ++ ++
Sbjct: 181 KAVVQLKP--------RHPAHPMRGRLPLLAVCDYKQVEV 212
Score = 96.3 bits (239), Expect = 1e-21
Identities = 27/199 (13%), Positives = 75/199 (37%), Gaps = 4/199 (2%)
Query: 739 RLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYAS 798
+ H F A A +W+ + D N+ + + + + EL+
Sbjct: 3 HMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEK 62
Query: 799 TIEALRNQASQLGDQDKE-SPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSE 857
I+ L+N +L +D P V A+++ ++ +L+L + L + + ++ FS+
Sbjct: 63 KIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD 122
Query: 858 ADGVQQWIGEKDRMLATMV---PGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQ 914
+ + + L + +E + +++N ++ + + A+
Sbjct: 123 VREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKA 182
Query: 915 LLHVEHPNSEQIVTRQNQL 933
++ ++ + + + L
Sbjct: 183 VVQLKPRHPAHPMRGRLPL 201
Score = 94.7 bits (235), Expect = 4e-21
Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 5/221 (2%)
Query: 951 LNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQA 1010
+ S + +F + + W+ +K+ D + T + + S + R+L +
Sbjct: 4 MRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSD-RNTNMTAKKESYSALMRELELKEK 62
Query: 1011 KLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRD 1070
K+ L+ + +E + ++ W + Q+ +A L+E +F D
Sbjct: 63 KIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD 122
Query: 1071 LDHFQVWLTKTQTDVA---SEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEK 1127
+ + L K Q + S D +++ E LL Q +E+++ Y + +
Sbjct: 123 VREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKA 182
Query: 1128 VTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLL 1168
V M R L A+ D + + + + L
Sbjct: 183 VVQLKP-RHPAHPMRGRLPLLAVCDYKQVEVTVHKGDECQL 222
Score = 93.2 bits (231), Expect = 1e-20
Identities = 26/220 (11%), Positives = 77/220 (35%), Gaps = 9/220 (4%)
Query: 521 RLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGE 580
+ S L L + E + + D+ + + +S + ++ + +
Sbjct: 3 HMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEK 62
Query: 581 RVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKL 640
++K + R L E+ + L+ +S +++L A L+E+
Sbjct: 63 KIKELQNAGDRLLREDHP------ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAY 116
Query: 641 WQLYWDMADEENWIKEKEQIV---STGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSV 697
+Q + D+ + E +++ ++ + + D +T + LL + ++++ ++ L +
Sbjct: 117 FQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGL 176
Query: 698 IAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRR 737
+V + +A+ +
Sbjct: 177 AKRAKAVVQLKPRHPAHPMRGRLPLLAVCDYKQVEVTVHK 216
Score = 92.4 bits (229), Expect = 3e-20
Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 4/186 (2%)
Query: 1168 LSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDK 1227
+ +L F A + + L+++E + + + + A + +E + K
Sbjct: 4 MRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK 63
Query: 1228 INGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDC 1287
I + DRL EDH A V+ + + + + LK+ QF D
Sbjct: 64 IKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSDV 123
Query: 1288 EELGEWVQEKKFTAQDE----TYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSEL 1343
E +Q+ + + + + + Q + ++ K L + + +
Sbjct: 124 REAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAV 183
Query: 1344 MKEKPE 1349
++ KP
Sbjct: 184 VQLKPR 189
Score = 91.7 bits (227), Expect = 6e-20
Identities = 26/181 (14%), Positives = 71/181 (39%), Gaps = 7/181 (3%)
Query: 1056 AKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYT 1115
+ + LH F+ +WL + + + D + + A+ E++
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1116 EDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQ 1175
+ K++ + G+++ E D P + AL+ W + ++ + L ++
Sbjct: 62 KKIKELQNAGDRLLRE----DHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYF 117
Query: 1176 MFNRDAKQAEVLLSQQEHVLSKDETP---VNLEQVENLIKRHEAFLTTMEANDDKINGVV 1232
F D ++AE L + + L + + + ++E+L++ + + ++G+
Sbjct: 118 QFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLA 177
Query: 1233 Q 1233
+
Sbjct: 178 K 178
Score = 90.1 bits (223), Expect = 2e-19
Identities = 26/201 (12%), Positives = 72/201 (35%), Gaps = 4/201 (1%)
Query: 1272 ETLKDQLQLHQFLQDCEELGEWVQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNK 1330
++ LH F+ + W+ EK + + + +K + A E+ +
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1331 DRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQ 1390
++ +Q +G L++E + + L Q+ + L ++
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 1391 TCDDIDSWMNELEKQIE---NEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAE 1447
+ + + +L++ + + D + + + L+Q Q + Q+ +S L +A+
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAK 181
Query: 1448 ILQKTVPDKMEEIVVKKSAVE 1468
+ + P + + +
Sbjct: 182 AVVQLKPRHPAHPMRGRLPLL 202
Score = 87.4 bits (216), Expect = 2e-18
Identities = 27/198 (13%), Positives = 65/198 (32%), Gaps = 4/198 (2%)
Query: 1589 SKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYA 1648
S + E ++ A++ W++E+E + D + + + L +E
Sbjct: 2 SHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKE 61
Query: 1649 DTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNR 1708
I++L +L E HP + Q+ + ++ + L A L E F
Sbjct: 62 KKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFS 121
Query: 1709 EVDDLEQWIAEREVV---AGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIA 1765
+V + E + + + S + + L + ++ ++ + A
Sbjct: 122 DVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYK-GHLSGLAKRA 180
Query: 1766 DQLIAAGHSDSATIAEWK 1783
++ A +
Sbjct: 181 KAVVQLKPRHPAHPMRGR 198
Score = 82.8 bits (204), Expect = 5e-17
Identities = 25/238 (10%), Positives = 84/238 (35%), Gaps = 10/238 (4%)
Query: 1376 GERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVK 1435
G + W+NE E++ D ++ + + ++ +K
Sbjct: 1 GSHMRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELK 60
Query: 1436 AKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFR 1495
K++ EL+ + L + + ++A++ ++ + + + L++ +QF
Sbjct: 61 EKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFF 120
Query: 1496 RDIEDEKLWIAEK---LPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNG 1552
D+ + + + + L S + ++ + L + Q ++++ ++ ++ +
Sbjct: 121 SDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRA 180
Query: 1553 RKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESW 1610
+ ++ M L D ++ ++ + + L ++ W
Sbjct: 181 KAVVQLKPRHP-------AHPMRGRLPLLAVCDYKQVEVTVHKGDECQLVGPAQPSHW 231
Score = 81.7 bits (201), Expect = 1e-16
Identities = 28/217 (12%), Positives = 82/217 (37%), Gaps = 10/217 (4%)
Query: 1804 LVASRELHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQ 1862
+ + LH F L ++EK + + ++ + + +++L+ + +
Sbjct: 4 MRSLESLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK 63
Query: 1863 VQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIM 1922
++++ N +L + + +A + W+ + C + L + F+F
Sbjct: 64 IKELQNAGDRLLREDH-PARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD 122
Query: 1923 VRTLMLWM---DDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKE 1979
VR + + +R+ + +++ V+ +E L+ + Q K +++ + + + K
Sbjct: 123 VREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKA 182
Query: 1980 LLSRNHYASNEIKEKLVGLS-----NQRNALLHRWEE 2011
++ + L Q +H+ +E
Sbjct: 183 VVQLKPRHPAHPMRGRLPLLAVCDYKQVEVTVHKGDE 219
Score = 47.0 bits (111), Expect = 4e-05
Identities = 13/138 (9%), Positives = 41/138 (29%), Gaps = 11/138 (7%)
Query: 385 KMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARFNRKASMRETWLSENQRLVS 444
+ + W + + E L+E + F E L + Q +
Sbjct: 87 SFQAALQTQWSWMLQLCCCIEAHLKENAAYFQ--------FFSDVREAEGQLQKLQEALR 138
Query: 445 Q---DNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARK 501
+ + + +E + + + + Y+ + + ++ + K +
Sbjct: 139 RKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRHPAHPMRGR 198
Query: 502 ENVLRLWNYLLELLKARR 519
+L + +Y + +
Sbjct: 199 LPLLAVCDYKQVEVTVHK 216
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of
spectrin, alpha-helical linker region, 3-helix coiled
coil, structural protein; 2.00A {Gallus gallus} SCOP:
a.7.1.1 a.7.1.1
Length = 216
Score = 150 bits (381), Expect = 4e-41
Identities = 79/218 (36%), Positives = 124/218 (56%), Gaps = 7/218 (3%)
Query: 529 QQSFQEMLYILDS-MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQ 587
QQ+F + D + E++ L S+DYGK L V +LL+KH L+EADI+ +R+K +
Sbjct: 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNS 64
Query: 588 QSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDM 647
Q+ + D + + ++ + + + + +A RRA+L ES +L Q + DM
Sbjct: 65 QADSLMTSS------AFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDM 118
Query: 648 ADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQ 707
DEE+WIKEK+ +VS+ D G DLT + L KHK LE E+ AHE + V+ G +L +
Sbjct: 119 DDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDD 178
Query: 708 QHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVD 745
G + I+ RL + W+ L LAA R +RLEE+++
Sbjct: 179 NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
Score = 133 bits (335), Expect = 5e-35
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 642 QLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVG 701
+ D + W+ E E ++++ D G DL ++N LL KH+ LE +I AHE +L + +
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQA 66
Query: 702 DELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWML 761
D L+ F +++ + + +Q + +AA RR +L E+ HQFF D D + W+
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 762 DTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQD-KESPEV 820
+ LVSSED GRD VQ+L KKHK + EL + I+ + + +L D + E+
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEI 186
Query: 821 LERLASIEFRYKELLELAKLRKQRLLDAL 849
+RLA +KEL +LA R QRL ++L
Sbjct: 187 QQRLAQFVDHWKELKQLAAARGQRLEESL 215
Score = 128 bits (324), Expect = 2e-33
Identities = 62/213 (29%), Positives = 111/213 (52%)
Query: 1490 EAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLIC 1549
+ F I+D W++E S +YG L +V+ L KK+Q L +I HE R+ +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1550 NNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAES 1609
+ L+ D+++ E + R+Q++K RR+KL +S + Q+ D + ES
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1610 WMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPES 1669
W+ E++L + ED G+D QNL KKH+ LE + + I+ + +T ++L+ +
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 1670 DQIALKQSQVDKLYAGLKDLAGERRAKLDEALK 1702
++I + +Q + LK LA R +L+E+L+
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
Score = 126 bits (317), Expect = 1e-32
Identities = 67/212 (31%), Positives = 115/212 (54%)
Query: 1383 NREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSEL 1442
N++ + D D W++E+E + +ED G DLASVN L++K Q++E ++ ++ +L
Sbjct: 3 NKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDL 62
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEK 1502
+QA+ L + ++ K+ + RF++IK AR+ L + +QF RD++DE+
Sbjct: 63 NSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 1503 LWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHED 1562
WI EK S +YG L V L+KK++ L E+ HEP I + + G+KL D+
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1563 SAEFTSLIEDLMDRWQQLKKAVDERRSKLIQS 1594
E + +D W++LK+ R +L +S
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 121 bits (305), Expect = 6e-31
Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 6/216 (2%)
Query: 422 AARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVT 481
FN + WLSE + L++ +++G DL +V KKH+ +E DI A+E+R++ + +
Sbjct: 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNS 64
Query: 482 VSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDS 541
+ L D ++ ++E + + + + ARR +L S +L Q F++M
Sbjct: 65 QADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESW 124
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGF 601
++E K+ + S+DYG+ L GV++L +KH +EA++ ++ V+ ++ D+
Sbjct: 125 IKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDN----- 179
Query: 602 RPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
I +R+ Q D + EL +LA R RLEES
Sbjct: 180 -TIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 119 bits (299), Expect = 4e-30
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 1596 KAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLG 1655
K Q + + + W+SE E + ED GKD S NL+KKH+ LE + + D ++ L
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1656 ETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQ 1715
A L + ++ Q+ K+ ++ + +K +A RRAKL+E+ +L R++DD E
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1716 WIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSD 1775
WI E++++ S + G+D V L ++ K + + A + V +L
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHE-PAIQGVLDTGKKLSDDNTIG 182
Query: 1776 SATIAEWKDGLNEAWQDLLELIETRTQML 1804
I + + W++L +L R Q L
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRL 211
Score = 117 bits (294), Expect = 2e-29
Identities = 50/213 (23%), Positives = 105/213 (49%), Gaps = 1/213 (0%)
Query: 743 AVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEA 802
A F D D W+ + L++SED G+D A+V +LLKKH+ + ++ + ++
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 803 LRNQASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGV 861
L +QA L ++ +V ++ +I R++ + +A R+ +L ++ L++ F + D
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 862 QQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHP 921
+ WI EK ++++ G+D+ V+ ++ ++ + E+ A+ + V ++L
Sbjct: 122 ESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTI 181
Query: 922 NSEQIVTRQNQLNHDWAGLREKAEGKRDELNSA 954
E+I R Q W L++ A + L +
Sbjct: 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 116 bits (292), Expect = 3e-29
Identities = 44/219 (20%), Positives = 102/219 (46%), Gaps = 4/219 (1%)
Query: 1061 AGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKK 1120
A F + F WL++ + +ASED LA LL +HQ + +I + + K
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRD 1180
+ + + + ++++ + + ++ + M R+ L++S L F RD
Sbjct: 62 LNSQADSLMTSSAFDTSQ----VKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD 117
Query: 1181 AKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLND 1240
E + +++ ++S ++ +L V+NL K+H+ + A++ I GV+ +L+D
Sbjct: 118 MDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD 177
Query: 1241 EDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQ 1279
++ ++++++ D K+ A + + L++ L+
Sbjct: 178 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
Score = 109 bits (274), Expect = 8e-27
Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 848 ALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAV 907
A + W+ E + +LA+ GKD+ V + ++ + +++A+ R+
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKD 61
Query: 908 VNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRET 967
+N A L+ ++ Q+ ++ +N + ++ A +R +LN +H + F + +
Sbjct: 62 LNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDE 121
Query: 968 VSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHP 1027
SWI++KK ++ S D DLTG+ L+++ +E +LAA + + + + ++
Sbjct: 122 ESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEA 1061
E I++R+ Q W++L Q+ R +LEE+
Sbjct: 181 IGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214
Score = 108 bits (272), Expect = 1e-26
Identities = 52/219 (23%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 954 AHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLD 1013
A+ Q F+ ++ W+ + + +L S D DL + L ++ +E D++A + +L
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASED-YGKDLASVNNLLKKHQLLEADISAHEDRLK 60
Query: 1014 SLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDH 1073
L ++A ++ + ++++ + I ++++ M R AKL E+ LH+F RD+D
Sbjct: 61 DLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD 120
Query: 1074 FQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS 1133
+ W+ + + V+SED L + L +H+ + E+ + + ++D G+K++ + +
Sbjct: 121 EESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180
Query: 1134 THDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSL 1172
+ +++RL D W+EL ++ R Q L +SL
Sbjct: 181 IGKEE----IQQRLAQFVDHWKELKQLAAARGQRLEESL 215
Score = 105 bits (264), Expect = 2e-25
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 1174 LQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQ 1233
Q FN K + LS+ E +L+ ++ +L V NL+K+H+ + A++D++ +
Sbjct: 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNS 64
Query: 1234 FADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEW 1293
AD L + +VK K + IN R K A + L + +LHQF +D ++ W
Sbjct: 65 QADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESW 124
Query: 1294 VQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAE 1352
++EKK E Y R V + +H+ EAE+A+++ + V +G +L + E
Sbjct: 125 IKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKE 184
Query: 1353 LIGPKISDLGQQFDDLETTTKDKGERL 1379
I +++ + +L+ +G+RL
Sbjct: 185 EIQQRLAQFVDHWKELKQLAAARGQRL 211
Score = 104 bits (261), Expect = 5e-25
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 1700 ALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVA 1759
A K N + D + W++E E + S + G+D V L ++ + + D A +R+
Sbjct: 2 ANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHE-DRLK 60
Query: 1760 AVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKD 1819
+N AD L+ + D++ + + ++ +N +Q + + R L S LH+FF D D
Sbjct: 61 DLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD 120
Query: 1820 ILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYA 1878
I EK S++ GRD V L++KH+ +L + +Q + + KL
Sbjct: 121 EESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT 180
Query: 1879 GEKAKEITNREAEVVNAWASLQNACDARKQKLGD 1912
+EI R A+ V+ W L+ AR Q+L +
Sbjct: 181 IG-KEEIQQRLAQFVDHWKELKQLAAARGQRLEE 213
Score = 103 bits (259), Expect = 8e-25
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 1809 ELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQIC 1867
+ F KD +SE + S++ G+D SVN L +KHQ D+ + +++ +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1868 NESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLM 1927
+++ L S A + ++ ++ + + +++ AR+ KL ++ L +F +
Sbjct: 64 SQADSLMTSSAFD-TSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEE 122
Query: 1928 LWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYA 1987
W+ + +++ + RD++GV+ L H+ L+AE+ E + GK+L N
Sbjct: 123 SWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIG 182
Query: 1988 SNEIKEKLVGLSNQRNALLHRWEERWENLQLILE 2021
EI+++L + L R + L+ LE
Sbjct: 183 KEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
Score = 96.9 bits (241), Expect = 2e-22
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 1/191 (0%)
Query: 1918 KFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLG 1977
F ++ W+ +V + + + +D++ V L+ HQ L+A+I ED S
Sbjct: 7 NFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQA 66
Query: 1978 KELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLI 2037
L++ + + ++++K+K ++ + + R L ++QF RD E+W+
Sbjct: 67 DSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEESWIK 126
Query: 2038 AQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEE 2097
++ + S + G + V+NL KKH+ E A E + +L + N +EE
Sbjct: 127 EKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGK-KLSDDNTIGKEE 185
Query: 2098 ERKRQEELAAK 2108
++R +
Sbjct: 186 IQQRLAQFVDH 196
Score = 94.2 bits (234), Expect = 2e-21
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 1279 QLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQ 1337
+ F ++ W+ E + E Y + +V++ +HQ EA+I++++DRL +
Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLN 63
Query: 1338 QSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDS 1397
LM + K + +F +++ + +L +S+R + DD +S
Sbjct: 64 SQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDDEES 123
Query: 1398 WMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKM 1457
W+ E + + +ED G DL V L +K + +E ++A + + + L
Sbjct: 124 WIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGK 183
Query: 1458 EEIVVKKSAVEQRFEKIKEPLLARQRALEK 1487
EEI + + ++++K+ AR + LE+
Sbjct: 184 EEIQQRLAQFVDHWKELKQLAAARGQRLEE 213
Score = 74.2 bits (182), Expect = 1e-14
Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 14/225 (6%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
+ + D W+ E A L + L V L + + +
Sbjct: 6 QNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEAD------ISAHEDRL 59
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
Q+ + T + IN ++R++ R L E +
Sbjct: 60 KDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQ------ 113
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTV 482
F R E+W+ E + LVS +++G DL V+ KKH+ +E ++ A+E +Q V+
Sbjct: 114 --FFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDT 171
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQ 527
++L + + I R + W L +L AR RLE SL+
Sbjct: 172 GKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE 216
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle,
spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Length = 224
Score = 149 bits (377), Expect = 2e-40
Identities = 39/232 (16%), Positives = 88/232 (37%), Gaps = 13/232 (5%)
Query: 512 LELLKARRMRLESSLQLQQSFQEMLYILDS-MEELKMRLLSDDYGKHLMGVEDLLQKHSL 570
+ + L+ +L ++ + + L + ++E++++L ++G L VE L+ H
Sbjct: 5 IRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKN 64
Query: 571 VEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVER 630
V I +K + +++ +LE Y++L+ + +
Sbjct: 65 VHRAIEEFESSLKEAKISEIQMTAPLKLS---------YTDKLHRLESQYAKLLNTSRNQ 115
Query: 631 RARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAH 690
L+ L +E W+ EKE+ D +++ S H L E++
Sbjct: 116 ERHLDT---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQK 172
Query: 691 ESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEE 742
E + +V + ++L+ + H I W +L L + ++E
Sbjct: 173 EESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 119 bits (299), Expect = 4e-30
Identities = 34/229 (14%), Positives = 83/229 (36%), Gaps = 9/229 (3%)
Query: 1363 QQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILM 1422
Q + + L + + D+ +W++E++ Q++ + GSDL SV +
Sbjct: 3 MQIRKPLLKSSLLDQNLTEEEV---NMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHL 59
Query: 1423 QKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQ 1482
+ + + + + E + + K +E ++ K+ ++
Sbjct: 60 ENHKNVHRAIEEFESSLKEAKISE---IQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQE 116
Query: 1483 RALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHE 1542
R L+ + F +E +W+ EK S + ++ +V K + L +E++ E
Sbjct: 117 RHLD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKE 173
Query: 1543 PRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKL 1591
I + +L+ E H + + +W + + +
Sbjct: 174 ESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 118 bits (298), Expect = 6e-30
Identities = 39/229 (17%), Positives = 95/229 (41%), Gaps = 7/229 (3%)
Query: 1576 RWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMK 1635
+ Q++K + + + + + + +W+ E ++ + + G D S ++ ++
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 1636 KHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRA 1695
H+ + A+E++ ++++ + Q+T+ + K +++ YA L + + +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAPLKLS---YTDKLHRLESQYAKLLNTSRNQER 117
Query: 1696 KLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGT 1755
LD + W+ E+E +++ + V E R+ E
Sbjct: 118 HLDTLHNFV---TRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQ-KE 173
Query: 1756 ERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQML 1804
E + AV IA+QL+ H TI ++ + W +L+L + Q +
Sbjct: 174 ESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 118 bits (296), Expect = 1e-29
Identities = 38/230 (16%), Positives = 88/230 (38%), Gaps = 6/230 (2%)
Query: 1470 RFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKK 1529
+ +I++PLL + E + ++D W+ E TE+G+ L +V +
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 1530 KNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRS 1589
++++ + I+ E + + ++ + + L ++ +L +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTD---KLHRLESQYAKLLNTSRNQER 117
Query: 1590 KLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYAD 1649
L + ++ A+ W++E+E + D + S H L +E +
Sbjct: 118 HL---DTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEE 174
Query: 1650 TIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDE 1699
+I+ + E A QL E HP I ++ + ++ + L + E
Sbjct: 175 SIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 111 bits (278), Expect = 3e-27
Identities = 37/226 (16%), Positives = 93/226 (41%), Gaps = 8/226 (3%)
Query: 624 VKLAVERRARLEESRKLWQLYWDMADE-ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKA 682
++ + + + L+++ ++ + NW+ E + + + G DL ++ L HK
Sbjct: 5 IRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKN 64
Query: 683 LEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEE 742
+ I+ ES L ++ +L + + LL+ + + + L+
Sbjct: 65 VHRAIEEFESSLKEAKISEIQM---TAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDT 121
Query: 743 AVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEA 802
H F A + IW+ + + D ++V H ++ EL+ +I+A
Sbjct: 122 ---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKA 178
Query: 803 LRNQASQLGDQDKE-SPEVLERLASIEFRYKELLELAKLRKQRLLD 847
++ A QL ++ + A+++ ++ +L+L + +Q + +
Sbjct: 179 VQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 108 bits (272), Expect = 2e-26
Identities = 36/226 (15%), Positives = 85/226 (37%), Gaps = 5/226 (2%)
Query: 726 WQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKK 785
+ + + D+ W+ + + + G D +V+S L+
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 786 HKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRL 845
HK+V ++ + S+++ + Q+ K ++L +E +Y +LL ++ +++ L
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPLK--LSYTDKLHRLESQYAKLLNTSRNQERHL 119
Query: 846 LDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRV 905
+L+ + A W+ EK+ + V K + +E+ +
Sbjct: 120 D---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESI 176
Query: 906 AVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDEL 951
V ++A QLL HP I + + W+ + + + +
Sbjct: 177 KAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 100 bits (251), Expect = 1e-23
Identities = 34/236 (14%), Positives = 86/236 (36%), Gaps = 15/236 (6%)
Query: 404 RELALREELIRQEKLEQLAA---RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAK 460
+ + +R+ L++ L+Q + W+ E Q + + +G DL +VE+ +
Sbjct: 1 KLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 461 KHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRM 520
H+ + I +E ++ ++ A + + + LL + +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAP---LKLSYTDKLHRLESQYAKLLNTSRNQER 117
Query: 521 RLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGE 580
L+ L L + E + ++ D+ + V H+ + ++ E
Sbjct: 118 HLD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEE 174
Query: 581 RVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEE 636
+K+V + +++ L E I ++ +S +++L ++E
Sbjct: 175 SIKAVQEIAEQLLLENHP------ARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 98.1 bits (244), Expect = 9e-23
Identities = 33/233 (14%), Positives = 82/233 (35%), Gaps = 10/233 (4%)
Query: 1044 WEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQ 1103
Q+ + L + + + ++ + W+ + Q + + S L E L
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 1104 HQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWEN 1163
H+ + I+ + K+ ++TA ++L L + +L N
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPLKLS-------YTDKLHRLESQYAKLLNTSRN 114
Query: 1164 RQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEA 1223
+++ L L F A + L+++E + V H + +E
Sbjct: 115 QERHLDT---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQ 171
Query: 1224 NDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKD 1276
++ I V + A++L E+H A ++ + + + + + +++
Sbjct: 172 KEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 93.1 bits (231), Expect = 5e-21
Identities = 31/231 (13%), Positives = 79/231 (34%), Gaps = 10/231 (4%)
Query: 830 RYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKH 889
+ ++ L + L Q L + K + W+ E L G D+ VE
Sbjct: 4 QIRKPLLKSSLLDQNLTEEEVNMKFVQDLL---NWVDEMQVQLDRTEWGSDLPSVESHLE 60
Query: 890 RYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRD 949
+ + + S + Q+ + + ++L +A L + +
Sbjct: 61 NHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTD---KLHRLESQYAKLLNTSRNQER 117
Query: 950 ELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQ 1009
L++ H F + W+ +K+ + D + + + + + R+L +
Sbjct: 118 HLDTLH---NFVTRATNELIWLNEKEESEVAYD-WSERNSSVARKKSYHAELMRELEQKE 173
Query: 1010 AKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060
+ +++ A + E+ I ++ W + Q+ + + ++E
Sbjct: 174 ESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 90.8 bits (225), Expect = 3e-20
Identities = 37/229 (16%), Positives = 90/229 (39%), Gaps = 8/229 (3%)
Query: 1790 WQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRK 1848
+ + + + + E +D+L + E + E G D SV +
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 1849 HQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQ 1908
H+N + ++ +S +++ ++ A T++ + + +A L N +++
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTA----PLKLSYTDKLHRLESQYAKLLNTSRNQER 117
Query: 1909 KLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTRED 1968
L L F+ ++W+++ + + S V + H L E++ +E+
Sbjct: 118 HLDT---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEE 174
Query: 1969 NFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQ 2017
+ A + ++LL NH A I+ + Q + +L + +++Q
Sbjct: 175 SIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223
Score = 90.0 bits (223), Expect = 5e-20
Identities = 35/228 (15%), Positives = 73/228 (32%), Gaps = 9/228 (3%)
Query: 1686 LKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKE 1745
++ + + + + V DL W+ E +V E G D V E K
Sbjct: 5 IRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKN 64
Query: 1746 FDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLV 1805
R E + Q+ + + L + LL + + L
Sbjct: 65 VHRAIEEFE-SSLKEAKISEIQMT---APLKLSYTDKLHRLESQYAKLLNTSRNQERHL- 119
Query: 1806 ASRELHKFFHDCKDILGRISEKHH-AMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQ 1864
LH F + L ++EK ++ + SV + H +++L+ + ++
Sbjct: 120 --DTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIK 177
Query: 1865 QICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGD 1912
+ + +L I A + W+ + C +Q + +
Sbjct: 178 AVQEIAEQLLLENH-PARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224
Score = 85.0 bits (210), Expect = 3e-18
Identities = 28/227 (12%), Positives = 71/227 (31%), Gaps = 7/227 (3%)
Query: 1154 WEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKR 1213
++ K L ++ + + + + + L + E +L VE+ ++
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 1214 HEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMET 1273
H+ +E + + ++ K + + + Q
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPLK---LSYTDKLHRLESQYAKLLNTSRNQERH 118
Query: 1274 LKDQLQLHQFLQDCEELGEWVQEKK-FTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDR 1332
L LH F+ W+ EK+ + +V K + H E+ ++
Sbjct: 119 LD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEES 175
Query: 1333 LLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERL 1379
+ VQ+ +L+ E I + + Q+ + + + +
Sbjct: 176 IKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 80.4 bits (198), Expect = 1e-16
Identities = 34/221 (15%), Positives = 78/221 (35%), Gaps = 20/221 (9%)
Query: 303 HEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLEV 362
DLL W+ E L ++ + L V+ L N +
Sbjct: 23 EVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKN---------------VHR 67
Query: 363 LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA 422
+ +S ++ + ++L + E + L ++ L+ L
Sbjct: 68 AIEEFESSLKEAKIS----EIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTLH 123
Query: 423 ARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTV 482
F +A+ WL+E + ++ +V H + ++ EE ++AV +
Sbjct: 124 -NFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEI 182
Query: 483 SQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLE 523
+++L E + I A + + W+++L+L + ++
Sbjct: 183 AEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223
Score = 80.0 bits (197), Expect = 2e-16
Identities = 26/229 (11%), Positives = 84/229 (36%), Gaps = 11/229 (4%)
Query: 940 LREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLS 999
+R+ + + ++ ++W+++ + L T+ DL + +
Sbjct: 5 IRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTE-WGSDLPSVESHLENHK 63
Query: 1000 GMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLE 1059
+ R + ++ L + + + +++ ++ + +L + ++ L+
Sbjct: 64 NVHRAIEEFESSLKEAKISE---IQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD 120
Query: 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYK 1119
LH F+ + +WL + + + D + + + H + E++ E K
Sbjct: 121 T---LHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIK 177
Query: 1120 KMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLL 1168
+ + E++ E H + A++ W + ++ + +Q +
Sbjct: 178 AVQEIAEQLLLE--NHPARLT--IEAYRAAMQTQWSWILQLCQCVEQHI 222
Score = 79.3 bits (195), Expect = 3e-16
Identities = 32/213 (15%), Positives = 75/213 (35%), Gaps = 7/213 (3%)
Query: 1896 WASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNN 1955
++ + + + V+ L+ W+D++ Q++ +E D+ VE + N
Sbjct: 2 LMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLEN 61
Query: 1956 HQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWEN 2015
H+++ I+ E + ++ + +KL L +Q LL+ + +
Sbjct: 62 HKNVHRAIEEFESSLKEAKISEIQMTAPLK---LSYTDKLHRLESQYAKLLNTSRNQERH 118
Query: 2016 LQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEER 2075
L ++ F A WL +E ++ + V H + +EE
Sbjct: 119 LD---TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEES 175
Query: 2076 FSALERLTTFELKELNKRKEEEERKRQEELAAK 2108
A++ + +L N + + +
Sbjct: 176 IKAVQEIAE-QLLLENHPARLTIEAYRAAMQTQ 207
Score = 75.0 bits (184), Expect = 9e-15
Identities = 31/224 (13%), Positives = 78/224 (34%), Gaps = 7/224 (3%)
Query: 1264 KERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAF 1322
++ + ++ + ++ ++L WV E + + +V S H+
Sbjct: 6 RKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNV 65
Query: 1323 EAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDS 1382
I + L + S ++ L K+ L Q+ L T++++ L
Sbjct: 66 HRAIEEFESSLKEAKISEIQMT---APLKLSYTDKLHRLESQYAKLLNTSRNQERHL--- 119
Query: 1383 NREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSEL 1442
+ + W+NE E+ D +SV + ++ K + + +
Sbjct: 120 DTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAV 179
Query: 1443 ETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALE 1486
+ AE L I ++A++ ++ I + ++ ++
Sbjct: 180 QEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain
alpha-II spectrin, fordrin alpha chain, sptan1,
SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Length = 218
Score = 144 bits (364), Expect = 8e-39
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 4/220 (1%)
Query: 1050 MLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIRE 1109
M ++ DL RFL D W+ + V+S++ + AE LL +HQ R
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1110 EIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLS 1169
EID ++ +G+++ A ++++L L +L K W R+ +L
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPE----IKQKLDILDQERADLEKAWVQRRMMLD 116
Query: 1170 QSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKIN 1229
Q L LQ+F+RD +QAE ++ +E L+ ++ +L+ VE LIK+HE F + ++KI
Sbjct: 117 QCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIA 176
Query: 1230 GVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQ 1269
+ FAD+L HYA + + + + DR K + +
Sbjct: 177 ALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIE 216
Score = 143 bits (362), Expect = 1e-38
Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 1/200 (0%)
Query: 1906 RKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDT 1965
D+ DL +FL R LM W++ + +++ E A+DV+G E L+ HQ + EID
Sbjct: 5 HHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDA 64
Query: 1966 REDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQF 2025
R F A G++LL+ HYAS EIK+KL L +R L W +R L LE+ F
Sbjct: 65 RAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLF 124
Query: 2026 ARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTF 2085
RD AE W+ A+E +L + + G ++D VE LIKKHE F+K+ QEE+ +AL+
Sbjct: 125 HRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFAD- 183
Query: 2086 ELKELNKRKEEEERKRQEEL 2105
+L + + R+ E+
Sbjct: 184 QLIAAGHYAKGDISSRRNEV 203
Score = 136 bits (344), Expect = 3e-36
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
Query: 626 LAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALED 685
+ +S L + D D +WI +VS+ ++ D+T LL +H+
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 686 EIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVD 745
EI A + G +L+ H+ + I+ +L +L RR L++ ++
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 746 FHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRN 805
F D + WM +++ED G +V++L+KKH+D + + I AL+
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQA 180
Query: 806 QASQLGDQDK-ESPEVLERLASIEFRYKELLELAKLRK 842
A QL ++ R + R++ L ++
Sbjct: 181 FADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 132 bits (334), Expect = 8e-35
Identities = 55/214 (25%), Positives = 90/214 (42%)
Query: 1481 RQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDN 1540
+ +F D D WI S E + L +++Q EID
Sbjct: 5 HHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDA 64
Query: 1541 HEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQY 1600
G++L+ GH S E ++ L L+KA +RR L Q + Q +
Sbjct: 65 RAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLF 124
Query: 1601 LFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQ 1660
D +AE+WM+ +E ++ ED+G S + L+KKHE + A+ + I L A Q
Sbjct: 125 HRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQ 184
Query: 1661 LTSEMHPESDQIALKQSQVDKLYAGLKDLAGERR 1694
L + H I+ ++++V + LK E+R
Sbjct: 185 LIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 129 bits (326), Expect = 1e-33
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 1/218 (0%)
Query: 732 LAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTE 791
+ ++ D +F +D D+ W+ LVSS+++ +D ++LL++H++
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 792 ELKNYASTIEALRNQASQLGDQDKE-SPEVLERLASIEFRYKELLELAKLRKQRLLDALS 850
E+ A T +A QL SPE+ ++L ++ +L + R+ L L
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 851 LYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQ 910
L + + + W+ ++ L T G ++ VE + +++ FDK +N ++A +
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQA 180
Query: 911 LARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKR 948
A QL+ H I +R+N++ W L+ + KR
Sbjct: 181 FADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 128 bits (322), Expect = 4e-33
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 1585 DERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAV 1644
S Q++L D + SW++ + ++ KD + L+++H+ +
Sbjct: 3 HHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEI 62
Query: 1645 EDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLF 1704
+ A T + + +QL + H S +I K +D+ A L+ +RR LD+ L+L
Sbjct: 63 DARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQ 122
Query: 1705 MLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGI 1764
+ +R+ + E W+A RE + + G D V L ++ ++FD+ E++AA+
Sbjct: 123 LFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQE-EKIAALQAF 181
Query: 1765 ADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETR 1800
ADQLIAAGH I+ ++ + + W+ L + +
Sbjct: 182 ADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 121 bits (304), Expect = 9e-31
Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 6/224 (2%)
Query: 514 LLKARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEA 573
+ S LQ+ + ++ + ++ + SD+ K + G E LL++H
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 574 DINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRAR 633
+I+ ++ Q Q+ L I +++ L+ ++L K V+RR
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHY------ASPEIKQKLDILDQERADLEKAWVQRRMM 114
Query: 634 LEESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQ 693
L++ +L + D ENW+ +E ++T D G L ++ L+ KH+ + I E +
Sbjct: 115 LDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK 174
Query: 694 LMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRR 737
+ ++ A D+L+ H+ I R + + W+ L +R
Sbjct: 175 IAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 115 bits (290), Expect = 6e-29
Identities = 45/217 (20%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 1160 MWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLT 1219
M + S +LQ F D + ++ ++S DE ++ E L++RH+ T
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1220 TMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQ 1279
++A QF +L HYA+ ++K+K D ++ R ++ Q+ L L+
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 1280 LHQFLQDCEELGEWVQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQ 1338
L F +DCE+ W+ + F ++ S +V + +H+ F+ I ++++ +Q
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQA 180
Query: 1339 SGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDK 1375
+L+ I + +++ ++ L+ +K
Sbjct: 181 FADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 108 bits (272), Expect = 2e-26
Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
Query: 837 LAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDK 896
+ D+ L + S+ + WI ++++ KD+ E + R+
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 897 EMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHG 956
E++A A Q +QLL H S +I + + L+ + A L + +R L+
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 957 VQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLE 1016
+Q FH +C + +W+ ++ L + D L + L ++ ++ + + K+ +L+
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTED-KGDSLDSVEALIKKHEDFDKAINVQEEKIAALQ 179
Query: 1017 AEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKER 1054
A A + I R ++ W +L + E+
Sbjct: 180 AFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 107 bits (269), Expect = 4e-26
Identities = 49/212 (23%), Positives = 96/212 (45%)
Query: 1377 ERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKA 1436
DS+ D+ SW+N + + +++ D+ L+++ Q T++ +A
Sbjct: 7 HHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARA 66
Query: 1437 KQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRR 1496
E + L EI K ++Q +++ + R+ L++ E F R
Sbjct: 67 GTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHR 126
Query: 1497 DIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLI 1556
D E + W+A + + + G+SL +V L KK++ K I+ E +I + +LI
Sbjct: 127 DCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLI 186
Query: 1557 DEGHEDSAEFTSLIEDLMDRWQQLKKAVDERR 1588
GH + +S +++DRW++LK + E+R
Sbjct: 187 AAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 104 bits (262), Expect = 3e-25
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 8/220 (3%)
Query: 414 RQEKLEQLAA--RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFA 471
RF +W++ + LVS D D+ EA ++H+ T+I A
Sbjct: 5 HHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDA 64
Query: 472 YEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQS 531
QA Q+L A ++ I + + + + L + RRM L+ L+LQ
Sbjct: 65 RAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLF 124
Query: 532 FQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQR 591
++ + M + L ++D G L VE L++KH + INV E++ ++ + +
Sbjct: 125 HRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQ 184
Query: 592 FLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERR 631
+ I R ++ D + L +E+R
Sbjct: 185 LIAAG------HYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 101 bits (253), Expect = 6e-24
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 3/220 (1%)
Query: 1689 LAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDR 1748
+ ++ L + DL WI + S EL +D L ER +E
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1749 DTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASR 1808
+ +A A QL+A GH S I + D L++ DL + R ML
Sbjct: 61 EIDARA-GTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCL 119
Query: 1809 ELHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQIC 1867
EL F DC+ ++ + +++ G SV L +KH++F + + + ++ +
Sbjct: 120 ELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQ 179
Query: 1868 NESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARK 1907
+ +L A+ +I++R EV++ W L+ ++
Sbjct: 180 AFADQLIAA-GHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 101 bits (252), Expect = 7e-24
Identities = 45/218 (20%), Positives = 83/218 (38%), Gaps = 2/218 (0%)
Query: 1796 LIETRTQMLVASRELHKFFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQ 1854
+ S +L +F D +D++ I+ + SDEL +D L +HQ
Sbjct: 1 MGHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT 60
Query: 1855 DLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTG 1914
++ Q +L A + EI + + A L+ A R+ L
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAH-GHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCL 119
Query: 1915 DLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACI 1974
+L F WM +NT +K + VE L+ H+ I+ +E+ A
Sbjct: 120 ELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQ 179
Query: 1975 SLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEER 2012
+ +L++ HYA +I + + ++ L + E+
Sbjct: 180 AFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 93.8 bits (233), Expect = 2e-21
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 1/216 (0%)
Query: 1267 AHQQMETLKDQLQLHQFLQDCEELGEWVQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAE 1325
H D L +FL D +L W+ + DE + + RHQ E
Sbjct: 2 GHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTE 61
Query: 1326 IASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNRE 1385
I + +Q G +L+ + I K+ L Q+ DLE + L
Sbjct: 62 IDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLEL 121
Query: 1386 VLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQ 1445
L H+ C+ ++WM E + ED G L SV L++K + + + V+ ++++ L+
Sbjct: 122 QLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAF 181
Query: 1446 AEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLAR 1481
A+ L +I +++ V R+ ++K ++ +
Sbjct: 182 ADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEK 217
Score = 92.7 bits (230), Expect = 6e-21
Identities = 40/221 (18%), Positives = 86/221 (38%), Gaps = 5/221 (2%)
Query: 944 AEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMER 1003
+ +H +Q F + R+ +SWI + ++ S + L D+TG L R
Sbjct: 2 GHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDE-LAKDVTGAEALLERHQEHRT 60
Query: 1004 DLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGD 1063
++ A + E + + I++++ + L + +R L++ +
Sbjct: 61 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 120
Query: 1064 LHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMD 1123
L F RD + + W+ + + +ED SL E L+ +H+ + I+ E +
Sbjct: 121 LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQA 180
Query: 1124 YGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENR 1164
+ +++ A + H + R + D W L +
Sbjct: 181 FADQLIA--AGHYAKGD--ISSRRNEVLDRWRRLKAQMIEK 217
Score = 82.7 bits (204), Expect = 2e-17
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 16/219 (7%)
Query: 302 IHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEKGNLE 361
+ + S DL+ WI + + A + G + L + +RT
Sbjct: 15 LQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRT-------EIDARAG 67
Query: 362 VLLFTLQSKMRANNQKPYTPKEGKM-ISDINKAWERLEKAEHERELALREELIRQEKLEQ 420
Q + Y E K + +++ LEKA +R + L + L Q
Sbjct: 68 TFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQ----- 122
Query: 421 LAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVV 480
F+R E W++ + ++ ++ G L +VEA KKHE + I EE++ A+
Sbjct: 123 ---LFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQ 179
Query: 481 TVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARR 519
+ +L A ++ I++R+ VL W L + +R
Sbjct: 180 AFADQLIAAGHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218
Score = 44.1 bits (104), Expect = 2e-04
Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 1/100 (1%)
Query: 2009 WEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKS 2068
+ ++ +F D +W+ + S EL + E L+++H+
Sbjct: 2 GHHHHHHSHDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTE 61
Query: 2069 AIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAK 2108
A+ F A E+ +L E +++ + L +
Sbjct: 62 IDARAGTFQAFEQFGQ-QLLAHGHYASPEIKQKLDILDQE 100
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP:
b.55.1.1
Length = 122
Score = 138 bits (350), Expect = 3e-38
Identities = 55/122 (45%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
Query: 2148 PTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIY 2207
+GA EG + RKHEW++ K+ASNRSWDK++++ + + FYKDQK KS+PE+
Sbjct: 2 SGTGAGE-GHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELT 60
Query: 2208 YKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
++ E ++L+ + ++A DY+KKKHV RVK NGA +L QA +D EM++WVT+L +
Sbjct: 61 FRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120
Query: 2268 QA 2269
A
Sbjct: 121 TA 122
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin
repeat structural protein, crosslinking; 2.22A {Homo
sapiens}
Length = 210
Score = 137 bits (345), Expect = 2e-36
Identities = 39/214 (18%), Positives = 75/214 (35%), Gaps = 12/214 (5%)
Query: 529 QQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQ 588
+ + + +L +EE + R+ ++G L VE L H + I +++
Sbjct: 8 DSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSD 67
Query: 589 SQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMA 648
+ P + + +L+ Y++L+ + R LE L
Sbjct: 68 EGQL---------SPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLES---LHSFVAAAT 115
Query: 649 DEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQ 708
E W+ EKE+ D T + + AL E++ E ++ + GD L+ +
Sbjct: 116 KELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 175
Query: 709 HFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEE 742
H + W +L L L+E
Sbjct: 176 HPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 116 bits (291), Expect = 3e-29
Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 5/204 (2%)
Query: 748 QFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQA 807
D+ W+ + V + G D +V++ L H+ + + ++ + + IE R+
Sbjct: 9 STLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDE 68
Query: 808 SQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGE 867
QL + + L ++ +Y +LL +K R + L SL+ + A W+ E
Sbjct: 69 GQLSPATR--GAYRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNE 123
Query: 868 KDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIV 927
K+ ++ K Y +E+ ++ + +LL +HP +
Sbjct: 124 KEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVE 183
Query: 928 TRQNQLNHDWAGLREKAEGKRDEL 951
+ Q L W+ + + L
Sbjct: 184 SFQAALQTQWSWMLQLCCCIEAHL 207
Score = 111 bits (278), Expect = 2e-27
Identities = 35/202 (17%), Positives = 80/202 (39%), Gaps = 6/202 (2%)
Query: 1393 DDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKT 1452
D+ +W+ E + +++ + G DL SV + + + + ++ + L
Sbjct: 15 QDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPA 74
Query: 1453 VPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSA 1512
+ + ++ ++ K+ AR R+LE + F E +W+ EK
Sbjct: 75 TRGAYRDCL---GRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEE 128
Query: 1513 KSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIED 1572
++ + N+ K+ +L +E++ E +I + N G +L+ E H S
Sbjct: 129 VGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAA 188
Query: 1573 LMDRWQQLKKAVDERRSKLIQS 1594
L +W + + + L ++
Sbjct: 189 LQTQWSWMLQLCCCIEAHLKEN 210
Score = 108 bits (272), Expect = 1e-26
Identities = 35/214 (16%), Positives = 76/214 (35%), Gaps = 6/214 (2%)
Query: 1486 EKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRI 1545
+ R ++D W+ E E+G L +V ++ L + I+ +I
Sbjct: 2 SHMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 61
Query: 1546 NLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDAS 1605
++ +L + + L ++ +L + R L E ++ A+
Sbjct: 62 ERARSDEGQLSPATRGAYRDC---LGRLDLQYAKLLNSSKARLRSL---ESLHSFVAAAT 115
Query: 1606 EAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEM 1665
+ W++E+E + D + + + L +E I++L +L E
Sbjct: 116 KELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 175
Query: 1666 HPESDQIALKQSQVDKLYAGLKDLAGERRAKLDE 1699
HP + Q+ + ++ + L A L E
Sbjct: 176 HPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 107 bits (269), Expect = 3e-26
Identities = 40/214 (18%), Positives = 81/214 (37%), Gaps = 8/214 (3%)
Query: 636 ESRKLWQLYW-DMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQL 694
+L + D W++E + V + G DL ++ L H+ L I+ +++
Sbjct: 2 SHMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 61
Query: 695 MSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAV 754
+ +L R L + LL+ + R + LE H F A A
Sbjct: 62 ERARSDEGQLSPATRG---AYRDCLGRLDLQYAKLLNSSKARLRSLES---LHSFVAAAT 115
Query: 755 DVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQD 814
+W+ + D N+ + + + + EL+ I+ L+N +L +D
Sbjct: 116 KELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 175
Query: 815 KE-SPEVLERLASIEFRYKELLELAKLRKQRLLD 847
P V A+++ ++ +L+L + L +
Sbjct: 176 HPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 103 bits (258), Expect = 9e-25
Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 7/207 (3%)
Query: 1598 QQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGET 1657
L + +W+ E + + + G D S + + H L ++E++ I +
Sbjct: 8 DSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSD 67
Query: 1658 ARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWI 1717
QL+ ++D YA L + + R L+ W+
Sbjct: 68 EGQLSPATRGAYRD---CLGRLDLQYAKLLNSSKARLRSLESLHSFV---AAATKELMWL 121
Query: 1718 AEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSA 1777
E+E + ++T E + R+ E +++ + D+L+ H
Sbjct: 122 NEKEEEEVGFDWSDRNTNMTAKKESYSALMRELEL-KEKKIKELQNAGDRLLREDHPARP 180
Query: 1778 TIAEWKDGLNEAWQDLLELIETRTQML 1804
T+ ++ L W +L+L L
Sbjct: 181 TVESFQAALQTQWSWMLQLCCCIEAHL 207
Score = 98.5 bits (245), Expect = 6e-23
Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 10/210 (4%)
Query: 1067 FLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGE 1126
LR L W+ + Q V + L E L H+ + + I+ + ++
Sbjct: 10 TLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEG 69
Query: 1127 KVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEV 1186
+++ R+ L L + +L + R + L L F A + +
Sbjct: 70 QLSPATRGA-------YRDCLGRLDLQYAKLLNSSKARLRSLES---LHSFVAAATKELM 119
Query: 1187 LLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAA 1246
L+++E + + + + A + +E + KI + DRL EDH A
Sbjct: 120 WLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPAR 179
Query: 1247 DKVKKKADNINDRRNANKERAHQQMETLKD 1276
V+ + + + + LK+
Sbjct: 180 PTVESFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 96.2 bits (239), Expect = 3e-22
Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 12/221 (5%)
Query: 417 KLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERV 476
+L R W+ ENQ V +G DL +VEA H + I + ++
Sbjct: 2 SHMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKI 61
Query: 477 QAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEML 536
+ + +L ++ + RL +LL + + RL S L
Sbjct: 62 ERARSDEGQLSPATRGAY------RDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAAT 115
Query: 537 YILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEE 596
L + E + + D+ + + +S + ++ + +++K + R L E+
Sbjct: 116 KELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED 175
Query: 597 TNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
+ L+ +S +++L A L+E+
Sbjct: 176 HP------ARPTVESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 91.2 bits (226), Expect = 2e-20
Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 7/206 (3%)
Query: 855 FSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQ 914
+ W+ E + G D+ VE + G + + +++ Q
Sbjct: 11 LRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQ 70
Query: 915 LLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDK 974
L +L+ +A L ++ + L S H +F + + W+ +K
Sbjct: 71 LSPATRGAYRD---CLGRLDLQYAKLLNSSKARLRSLESLH---SFVAAATKELMWLNEK 124
Query: 975 KRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIR 1034
+ D + T + + S + R+L + K+ L+ + +E +
Sbjct: 125 EEEEVGFDWSD-RNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVE 183
Query: 1035 ERIKQIRIIWEQLTQMLKERDAKLEE 1060
++ W + Q+ +A L+E
Sbjct: 184 SFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 87.3 bits (216), Expect = 3e-19
Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 20/228 (8%)
Query: 298 NDRMIHEYESLTSDLLRWIQETIASLGDRQFANSLVGVQQQLLQFNNYRTVEKPPKFVEK 357
+ + DLL W++E + ++ L V+ QL E
Sbjct: 3 HMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQ-----SIEEF 57
Query: 358 GNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEK 417
+ + ++ + Y + ++ + +L + R
Sbjct: 58 RAKIERARSDEGQLSPATRGAYR----DCLGRLDLQYAKLLNSSKAR----------LRS 103
Query: 418 LEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQ 477
LE L F A+ WL+E + ++ + A + + A+ ++ E++++
Sbjct: 104 LESLH-SFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIK 162
Query: 478 AVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESS 525
+ L E + + + + + W+++L+L L+ +
Sbjct: 163 ELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 86.9 bits (215), Expect = 4e-19
Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 9/206 (4%)
Query: 1708 REVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQ 1767
R + DL W+ E + E G D V + + E ++ Q
Sbjct: 12 RYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFR-AKIERARSDEGQ 70
Query: 1768 LIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEK 1827
L A + L+ + LL + R + L LH F L ++EK
Sbjct: 71 LSPATRGA---YRDCLGRLDLQYAKLLNSSKARLRSL---ESLHSFVAAATKELMWLNEK 124
Query: 1828 HH-AMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEIT 1886
+ + ++ + + +++L+ + +++++ N +L +
Sbjct: 125 EEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRE-DHPARPTVE 183
Query: 1887 NREAEVVNAWASLQNACDARKQKLGD 1912
+ +A + W+ + C + L +
Sbjct: 184 SFQAALQTQWSWMLQLCCCIEAHLKE 209
Score = 86.6 bits (214), Expect = 6e-19
Identities = 33/206 (16%), Positives = 79/206 (38%), Gaps = 8/206 (3%)
Query: 1813 FFHDCKDILGRISEKHHAM-SDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESA 1871
+D+L + E H + E G D SV H+ Q ++ ++++++ ++
Sbjct: 10 TLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEG 69
Query: 1872 KLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMD 1931
+L + + +A L N+ AR + L L F+ ++W++
Sbjct: 70 QLSP----ATRGAYRDCLGRLDLQYAKLLNSSKARLRSLES---LHSFVAAATKELMWLN 122
Query: 1932 DVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEI 1991
+ + + + + + ++ +L E++ +E + G LL +H A +
Sbjct: 123 EKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTV 182
Query: 1992 KEKLVGLSNQRNALLHRWEERWENLQ 2017
+ L Q + +L +L+
Sbjct: 183 ESFQAALQTQWSWMLQLCCCIEAHLK 208
Score = 81.9 bits (202), Expect = 2e-17
Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 7/209 (3%)
Query: 1175 QMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQF 1234
R + + + +H + E V+L VE + H ++E KI
Sbjct: 8 DSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSD 67
Query: 1235 ADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWV 1294
+L+ A + ++ + + ++ +L LH F+ + W+
Sbjct: 68 EGQLSPATRGA---YRDCLGRLDLQYAKLLNSSKARLRSL---ESLHSFVAAATKELMWL 121
Query: 1295 QEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAEL 1353
EK+ + + +K + A E+ + ++ +Q +G L++E
Sbjct: 122 NEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPT 181
Query: 1354 IGPKISDLGQQFDDLETTTKDKGERLFDS 1382
+ + L Q+ + L ++
Sbjct: 182 VESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 78.9 bits (194), Expect = 3e-16
Identities = 30/214 (14%), Positives = 82/214 (38%), Gaps = 11/214 (5%)
Query: 958 QTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEA 1017
+ ++ ++W+E+ + + + +DL + G+ + + +AK++ +
Sbjct: 8 DSTLRYLQDLLAWVEENQHRVDGAE-WGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARS 66
Query: 1018 EAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVW 1077
+ P A R+ + ++ + + +L K R L LH F+ +W
Sbjct: 67 ---DEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKAR---LRSLESLHSFVAAATKELMW 120
Query: 1078 LTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDD 1137
L + + + D + + A+ E++ + K++ + G+++ E H
Sbjct: 121 LNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRE--DHPA 178
Query: 1138 PQYMFLRERLKALRDGWEELHKMWENRQQLLSQS 1171
+ AL+ W + ++ + L ++
Sbjct: 179 RPT--VESFQAALQTQWSWMLQLCCCIEAHLKEN 210
Score = 76.5 bits (188), Expect = 2e-15
Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 7/183 (3%)
Query: 1926 LMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNH 1985
L+ W+++ +++ +E D+ VE + +H+ L I+ S +L
Sbjct: 17 LLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATR 76
Query: 1986 YASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMS 2045
++ L L Q LL+ + R +L+ ++ F A WL +E +
Sbjct: 77 ---GAYRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATKELMWLNEKEEEEVG 130
Query: 2046 MELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEEL 2105
+ + + + A + +E++ L+ L + Q L
Sbjct: 131 FDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGD-RLLREDHPARPTVESFQAAL 189
Query: 2106 AAK 2108
+
Sbjct: 190 QTQ 192
Score = 72.7 bits (178), Expect = 4e-14
Identities = 29/212 (13%), Positives = 77/212 (36%), Gaps = 8/212 (3%)
Query: 1277 QLQLHQ-FLQDCEELGEWVQEKKFTAQDETY-RSAKTVHSKWTRHQAFEAEIASNKDRLL 1334
++L L+ ++L WV+E + + +V ++ H+ I + ++
Sbjct: 3 HMELEDSTLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIE 62
Query: 1335 RVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDD 1394
R + +L P + L Q+ L ++K + L
Sbjct: 63 RARSDEGQLS---PATRGAYRDCLGRLDLQYAKLLNSSKARLRSL---ESLHSFVAAATK 116
Query: 1395 IDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVP 1454
W+NE E++ D ++ + + ++ +K K++ EL+ + L +
Sbjct: 117 ELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH 176
Query: 1455 DKMEEIVVKKSAVEQRFEKIKEPLLARQRALE 1486
+ ++A++ ++ + + + L+
Sbjct: 177 PARPTVESFQAALQTQWSWMLQLCCCIEAHLK 208
Score = 34.9 bits (80), Expect = 0.17
Identities = 10/84 (11%), Positives = 21/84 (25%)
Query: 2024 QFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLT 2083
R AW+ + + E G+ + VE + H +S +
Sbjct: 9 STLRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDE 68
Query: 2084 TFELKELNKRKEEEERKRQEELAA 2107
+ + + A
Sbjct: 69 GQLSPATRGAYRDCLGRLDLQYAK 92
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural
genomics, spectrin beta chain, brain 2, KIAA0302; NMR
{Homo sapiens} SCOP: b.55.1.1
Length = 123
Score = 131 bits (331), Expect = 1e-35
Identities = 52/124 (41%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYY 2208
+SG+ + MEG L RK E EA K+A+NRSW ++ LR L FYKD K+A + Y
Sbjct: 2 SSGSSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVP--Y 59
Query: 2209 KNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268
E P L VA DY K+KHVF++ +G EYLFQAK++ EM+ W+ ++
Sbjct: 60 HGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG 119
Query: 2269 ASGG 2272
S G
Sbjct: 120 PSSG 123
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus
musculus} SCOP: b.55.1.1 PDB: 1mph_A
Length = 106
Score = 121 bits (306), Expect = 1e-32
Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
MEG L RKHEWEA K+AS+RSW ++ + + FYKD KSA S I Y +E P L
Sbjct: 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASG--IPYHSEVPVSL 58
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSN 2263
+ +VA DY KKKHVF+++ +G EYLFQAK+DEEMN W+ A+S+
Sbjct: 59 KEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISS 105
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex,
pleckstrin homology domain, ligand binding protein; HET:
I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Length = 129
Score = 122 bits (307), Expect = 3e-32
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 2146 ERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPE 2205
R + G+ G L + R ++W +V L G L FY++ S
Sbjct: 3 RRASVGSHEVEKSGLLNMTKIAQG--GRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSG 60
Query: 2206 IYYKNETP---FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALS 2262
P +LRG + S +++V ++ G E+L Q+ ++ E+ W AL
Sbjct: 61 WGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALR 120
Query: 2263 NVCEQ 2267
V E+
Sbjct: 121 TVIER 125
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator,
pleckstrin homology domain, STR genomics consortium, SGC,
hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Length = 124
Score = 121 bits (306), Expect = 3e-32
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 2156 HMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSS----PEIYYKNE 2211
G L R + KR + W + L G +L F+KD K++ + P + E
Sbjct: 9 DKAGVLHRTKTADK-GKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPE 67
Query: 2212 TPFELRGGSAQVAD-DYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
ELRG + A D S +K+V +++ +G+EYL Q ++ ++ W A++ ++
Sbjct: 68 YTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQE 124
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix
bundle, alpha helix repeat, helical linker, actin
capping; 2.80A {Homo sapiens} PDB: 1owa_A
Length = 161
Score = 114 bits (287), Expect = 3e-29
Identities = 35/156 (22%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 1227 KINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQD 1286
K V ++ + A++++++ + R + KER ++ + L+D L F +D
Sbjct: 9 KETVVESSGPKVLET----AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRD 64
Query: 1287 CEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKE 1346
++LG+W+ EK D++Y + K+ +HQ+ EAE+ + + ++++ E
Sbjct: 65 ADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTM 124
Query: 1347 KPELAELIGPKISDLGQQFDDLETTTKDKGERLFDS 1382
E I +L +D L T +KG++L +
Sbjct: 125 GHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 100 bits (249), Expect = 4e-24
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 605 DPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTG 664
I ER Q++ Y + ER +LE+S L D D WI EK I++
Sbjct: 23 TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDK 82
Query: 665 DIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMA 724
D T I KH++LE E+Q + + +E H + + +++
Sbjct: 83 SYE-DPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRH 141
Query: 725 MWQNLLDLAAFRRKRLEEAV 744
+W LL+L + +L A+
Sbjct: 142 LWDLLLELTLEKGDQLLRAL 161
Score = 87.7 bits (217), Expect = 9e-20
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 1541 HEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQY 1600
P+ ++ ++G K++ E + E ++++ R+Q K+ V ER KL S Q +
Sbjct: 6 QFPKETVVESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 1601 LFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQ 1660
DA + W+ E+ + + +D + Q +KH++LE V+ + + +L +T +
Sbjct: 62 KRDADDLGKWIMEKVNILTDKS-YEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREE 120
Query: 1661 LTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEAL 1701
+ H ++ ++ L+ L +L E+ +L AL
Sbjct: 121 RFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161
Score = 84.6 bits (209), Expect = 1e-18
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 1458 EEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEY 1517
EEI ++ V R++ KE + R + LE F+RD +D WI EK+ Y
Sbjct: 25 EEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTDKSY 84
Query: 1518 GNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRW 1577
N+ +K+QSL E+ ++ + + GH E + IE+L W
Sbjct: 85 E-DPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLW 143
Query: 1578 QQLKKAVDERRSKLIQS 1594
L + E+ +L+++
Sbjct: 144 DLLLELTLEKGDQLLRA 160
Score = 82.7 bits (204), Expect = 5e-18
Identities = 33/161 (20%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 690 HESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQF 749
+ V + G +++ A+ I+ R Q+ + +Q+ + A R ++LE++ F
Sbjct: 6 QFPKETVVESSGPKVLET----AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVF 61
Query: 750 FADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQ 809
DA D+ W+++ V +++ + D N+Q +KH+ + E++ + + L +
Sbjct: 62 KRDADDLGKWIMEKVNILTDKS-YEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREE 120
Query: 810 LGDQDKE-SPEVLERLASIEFRYKELLELAKLRKQRLLDAL 849
E + + + LLEL + +LL AL
Sbjct: 121 RFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161
Score = 78.4 bits (193), Expect = 1e-16
Identities = 28/157 (17%), Positives = 57/157 (36%), Gaps = 5/157 (3%)
Query: 1756 ERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFH 1815
+ V +++ + I E + + +Q E + R Q L S L F
Sbjct: 8 PKETVVESSGPKVLE----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKR 63
Query: 1816 DCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQA 1875
D D+ I EK + ++D+ D ++ +KHQ+ ++QT + ++ +
Sbjct: 64 DADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFT 123
Query: 1876 SYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGD 1912
+E E+ + W L + +L
Sbjct: 124 MGH-SAHEETKAHIEELRHLWDLLLELTLEKGDQLLR 159
Score = 78.1 bits (192), Expect = 2e-16
Identities = 27/149 (18%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 1656 ETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQ 1715
++ +++I ++ +V Y K+ ER KL+++ L + R+ DDL +
Sbjct: 11 TVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGK 70
Query: 1716 WIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSD 1775
WI E+ + + + +D ++ +++ + + + + + ++ + ++ GHS
Sbjct: 71 WIMEKVNIL-TDKSYEDPTNIQGKYQKHQSLEAEVQT-KSRLMSELEKTREERFTMGHSA 128
Query: 1776 SATIAEWKDGLNEAWQDLLELIETRTQML 1804
+ L W LLEL + L
Sbjct: 129 HEETKAHIEELRHLWDLLLELTLEKGDQL 157
Score = 77.7 bits (191), Expect = 2e-16
Identities = 31/157 (19%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 798 STIEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSE 857
+ + ++ + + E+ ER + RY+ E R Q+L D+ L +
Sbjct: 8 PKETVVESSGPKVLE---TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRD 64
Query: 858 ADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLH 917
AD + +WI EK + T +D +++ ++ + E+ + ++ + + +
Sbjct: 65 ADDLGKWIMEKVNI-LTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFT 123
Query: 918 VEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSA 954
+ H E+ +L H W L E K D+L A
Sbjct: 124 MGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 76.9 bits (189), Expect = 4e-16
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 6/159 (3%)
Query: 903 SRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHI 962
+ VV ++L +E+I R+ ++ + +E+ + +L ++ +Q F
Sbjct: 8 PKETVVESSGPKVL----ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKR 63
Query: 963 ECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAI 1022
+ + WI +K IL D T I ++ +E ++ + LE
Sbjct: 64 DADDLGKWIMEKVNILTDKSY--EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREER 121
Query: 1023 EKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEA 1061
E + I+++R +W+ L ++ E+ +L A
Sbjct: 122 FTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 73.4 bits (180), Expect = 8e-15
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Query: 1869 ESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLML 1928
+ E A+EI R EV+ + S + R QKL D+ L F L
Sbjct: 11 TVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGK 70
Query: 1929 WMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYAS 1988
W+ + V + T + D + ++ HQSL+AE+ T+ + +E + H A
Sbjct: 71 WIMEKV-NILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAH 129
Query: 1989 NEIKEKLVGLSNQRNALLHRWEERWENLQ 2017
E K + L + + LL E+ + L
Sbjct: 130 EETKAHIEELRHLWDLLLELTLEKGDQLL 158
Score = 71.9 bits (176), Expect = 2e-14
Identities = 21/136 (15%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Query: 1143 LRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPV 1202
++ER + + ++ + R Q L S +LQ+F RDA + ++ ++L+ D++
Sbjct: 27 IQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILT-DKSYE 85
Query: 1203 NLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNA 1262
+ ++ ++H++ ++ ++ + + + H A ++ K + + +
Sbjct: 86 DPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDL 145
Query: 1263 NKERAHQQMETLKDQL 1278
E ++ + L L
Sbjct: 146 LLELTLEKGDQLLRAL 161
Score = 71.9 bits (176), Expect = 2e-14
Identities = 30/146 (20%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 1028 EEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVAS 1087
E AE I+ER +++ ++ + + ER KLE++ L F RD D W+ + + ++ +
Sbjct: 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIME-KVNILT 80
Query: 1088 EDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEK-VTAEPSTHDDPQYMFLRER 1146
+ + + + +HQ++ E+ + ++ E+ T S H++ +
Sbjct: 81 DKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEE-----TKAH 135
Query: 1147 LKALRDGWEELHKMWENRQQLLSQSL 1172
++ LR W+ L ++ + L ++L
Sbjct: 136 IEELRHLWDLLLELTLEKGDQLLRAL 161
Score = 70.0 bits (171), Expect = 1e-13
Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Query: 385 KMISDINKAWERLEKAEHERELALREELIRQEKLEQLAA--RFNRKASMRETWLSENQRL 442
K++ + ER ++ + R +KLE F R A W+ E +
Sbjct: 19 KVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNI 78
Query: 443 VSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKE 502
++ ++ D ++ +KH+++E ++ + + +E + + A E
Sbjct: 79 LTDKSYE-DPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIE 137
Query: 503 NVLRLWNYLLELLKARRMRLESSL 526
+ LW+ LLEL + +L +L
Sbjct: 138 ELRHLWDLLLELTLEKGDQLLRAL 161
Score = 67.3 bits (164), Expect = 1e-12
Identities = 26/165 (15%), Positives = 63/165 (38%), Gaps = 11/165 (6%)
Query: 473 EERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSF 532
+ V + ++ + I R++ VL + E + R +LE S LQ
Sbjct: 7 FPKETVVESSGPKVLE----TAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFK 62
Query: 533 QEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRF 592
++ + + E K+ +L+D + ++ QKH +EA++ + + + +
Sbjct: 63 RDADDLGKWIME-KVNILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREER 121
Query: 593 LDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEES 637
+++L + L++L +E+ +L +
Sbjct: 122 FTMG------HSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160
Score = 48.8 bits (116), Expect = 2e-06
Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 5/158 (3%)
Query: 1330 KDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIH 1389
+ V+ SG ++++ AE I + ++ ++ + ++G++L DS +
Sbjct: 7 FPKETVVESSGPKVLET----AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFK 62
Query: 1390 QTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEIL 1449
+ DD+ W+ E I + + D ++ QK Q +E ++ K++ +SELE E
Sbjct: 63 RDADDLGKWIMEKV-NILTDKSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREER 121
Query: 1450 QKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEK 1487
EE + ++ + E L + L +
Sbjct: 122 FTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLR 159
Score = 45.3 bits (107), Expect = 4e-05
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Query: 1988 SNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSME 2047
+ EI+E+ + + + R ER + L+ + F RDA W++ + +++ +
Sbjct: 24 AEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVN-ILTDK 82
Query: 2048 LGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAA 2107
++ +KH++ E + S LE+ E + EE + EEL
Sbjct: 83 SYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTRE-ERFTMGHSAHEETKAHIEELRH 141
Query: 2108 K 2108
Sbjct: 142 L 142
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21,
myristate, transport, nucleotide-binding, rhogap protein,
hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1
PDB: 2dhj_A
Length = 168
Score = 111 bits (277), Expect = 6e-28
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 9/143 (6%)
Query: 2156 HMEGTLVRKHEWEAIAKR--ASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP 2213
EG L + KR S R W +++V LRG LY YKD++ + + E P
Sbjct: 4 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTP----SEEEQP 59
Query: 2214 FELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQA--SG 2271
+ ++ +K+K+VFR+ + E LFQA++ ++M W+ + +G
Sbjct: 60 ISVNACLIDISYSETKRKNVFRLTTSDC-ECLFQAEDRDDMLAWIKTIQESSNLNEEDTG 118
Query: 2272 GPSSRSQTLPAAEMRKDEPKRRS 2294
+ + E K
Sbjct: 119 VTNRDLISRRIKEYNNLMSKAEQ 141
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical
bundle, actin cappin binding, alternative splicing,
calcium; 2.30A {Homo sapiens}
Length = 149
Score = 107 bits (268), Expect = 8e-27
Identities = 39/135 (28%), Positives = 78/135 (57%)
Query: 1246 ADKVKKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDET 1305
A+ ++++ + DR + KE + + + L+D + F +D EEL +W+QEK A DE
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN 73
Query: 1306 YRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQF 1365
Y+ + K +HQAFEAE+ +N ++++ ++G+ ++ E +E I ++ +L +Q+
Sbjct: 74 YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQW 133
Query: 1366 DDLETTTKDKGERLF 1380
+ L ++KG +L
Sbjct: 134 ELLLEKMREKGIKLL 148
Score = 99 bits (249), Expect = 3e-24
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 605 DPAIIVERVQQLEDAYSELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVSTG 664
I ER QQ+ D Y +L+ RR +LE+S + D + E WI+EK QI S
Sbjct: 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD- 71
Query: 665 DIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMA 724
+ D T + L KH+A E E+QA+ ++ + G+ ++++ HF ++ IR RL +
Sbjct: 72 ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 725 MWQNLLDLAAFRRKRLEE 742
W+ LL+ + +L +
Sbjct: 132 QWELLLEKMREKGIKLLQ 149
Score = 85.3 bits (211), Expect = 3e-19
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 1453 VPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSA 1512
V + E+I ++ V R+ + KE R++ LE F+RD E+ + WI EKL A
Sbjct: 10 VLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIA 69
Query: 1513 KSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIED 1572
Y N+ +K+Q+ E+ + I + G +I EGH S + + +
Sbjct: 70 SDENYK-DPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLME 128
Query: 1573 LMDRWQQLKKAVDERRSKLIQ 1593
L +W+ L + + E+ KL+Q
Sbjct: 129 LHRQWELLLEKMREKGIKLLQ 149
Score = 80.7 bits (199), Expect = 1e-17
Identities = 32/135 (23%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 712 ADRIRGRLQDTMAMWQNLLDLAAFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSED 771
A+ I+ R Q + + +L+ RR++LE++ F F DA +++ W+ + +++ S E+
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDEN 73
Query: 772 VGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKE-SPEVLERLASIEFR 830
+D N+Q L+KH+ E++ + I L + + + S + RL + +
Sbjct: 74 -YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQ 132
Query: 831 YKELLELAKLRKQRL 845
++ LLE + + +L
Sbjct: 133 WELLLEKMREKGIKL 147
Score = 79.9 bits (197), Expect = 3e-17
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 1561 EDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMV 1620
E + + + ++DR+ + K+ RR KL S + Q + DA E E W+ E+
Sbjct: 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD 71
Query: 1621 EDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVD 1680
E+ KD + Q ++KH+ E V+ + I +L ET + SE H S+ I + ++
Sbjct: 72 EN-YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELH 130
Query: 1681 KLYAGLKDLAGERRAKLDE 1699
+ + L + E+ KL +
Sbjct: 131 RQWELLLEKMREKGIKLLQ 149
Score = 76.8 bits (189), Expect = 3e-16
Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 1/137 (0%)
Query: 1774 SDSATIAEWKDGLNEAWQDLLELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSD 1833
+ I E + + + + EL R Q L S F D +++ I EK SD
Sbjct: 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD 71
Query: 1834 ELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVV 1893
E +D ++ +KHQ F ++Q + ++ + + ++ I R E+
Sbjct: 72 ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGH-FASETIRTRLMELH 130
Query: 1894 NAWASLQNACDARKQKL 1910
W L + KL
Sbjct: 131 RQWELLLEKMREKGIKL 147
Score = 76.5 bits (188), Expect = 4e-16
Identities = 34/141 (24%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 1664 EMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVV 1723
++ ++ I ++ QV Y K+L+ RR KL+++ + R+ ++LE+WI E+ +
Sbjct: 9 KVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQI 68
Query: 1724 AGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWK 1783
A S E +D ++ ++ + F+ + +A + ++ + +I+ GH S TI
Sbjct: 69 A-SDENYKDPTNLQGKLQKHQAFEAEVQANS-GAIVKLDETGNLMISEGHFASETIRTRL 126
Query: 1784 DGLNEAWQDLLELIETRTQML 1804
L+ W+ LLE + + L
Sbjct: 127 MELHRQWELLLEKMREKGIKL 147
Score = 74.9 bits (184), Expect = 1e-15
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 1880 EKAKEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIMVRTLMLWMDDVVRQMNT 1939
E A++I R +V++ + + R+QKL D+ F L W+ + Q+ +
Sbjct: 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEK-LQIAS 70
Query: 1940 SEKARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLS 1999
E +D + ++ + HQ+ +AE+ G ++S H+AS I+ +L+ L
Sbjct: 71 DENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELH 130
Query: 2000 NQRNALLHRWEERWENLQ 2017
Q LL + E+ L
Sbjct: 131 RQWELLLEKMREKGIKLL 148
Score = 74.9 bits (184), Expect = 2e-15
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 816 ESPEVLERLASIEFRYKELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATM 875
+ ++ ER + RY EL+ LR+Q+L D+ +A+ +++WI EK ++ +
Sbjct: 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD- 71
Query: 876 VPGKDIEDVEIMKHRYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNH 935
KD +++ ++ F+ E+ AN+ + +++ ++ H SE I TR +L+
Sbjct: 72 ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHR 131
Query: 936 DWAGLREKAEGKRDEL 951
W L EK K +L
Sbjct: 132 QWELLLEKMREKGIKL 147
Score = 74.9 bits (184), Expect = 2e-15
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 922 NSEQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQTFHIECRETVSWIEDKKRILQST 981
+E I R+ Q+ + +E + +R +L ++ Q F + E WI++K +I
Sbjct: 13 TAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASDE 72
Query: 982 DSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIR 1041
+ D T + ++ E ++ A + L+ + E +E IR R+ ++
Sbjct: 73 NY--KDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELH 130
Query: 1042 IIWEQLTQMLKERDAKLEE 1060
WE L + ++E+ KL +
Sbjct: 131 RQWELLLEKMREKGIKLLQ 149
Score = 73.8 bits (181), Expect = 4e-15
Identities = 27/132 (20%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 1143 LRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPV 1202
++ER + + D + ++ R+Q L S Q F RDA++ E + ++ + S DE
Sbjct: 17 IQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIAS-DENYK 75
Query: 1203 NLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNA 1262
+ ++ +++H+AF ++AN I + + + + E H+A++ ++ + ++ +
Sbjct: 76 DPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWEL 135
Query: 1263 NKERAHQQMETL 1274
E+ ++ L
Sbjct: 136 LLEKMREKGIKL 147
Score = 71.1 bits (174), Expect = 3e-14
Identities = 32/149 (21%), Positives = 61/149 (40%), Gaps = 7/149 (4%)
Query: 1023 EKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQ 1082
+ E AE I+ER +Q+ + + ++ R KLE++ F RD + + W+ +
Sbjct: 7 GVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKL 66
Query: 1083 TDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEK-VTAEPSTHDDPQYM 1141
+ E+ + + L +HQA E+ + K+ + G ++ +
Sbjct: 67 QIASDEN-YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASET---- 121
Query: 1142 FLRERLKALRDGWEELHKMWENRQQLLSQ 1170
+R RL L WE L + + L Q
Sbjct: 122 -IRTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 70.3 bits (172), Expect = 7e-14
Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSME 543
+ + I R++ VL ++ EL RR +LE S + Q ++ + ++
Sbjct: 4 DPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQ 63
Query: 544 ELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRP 603
E K+++ SD+ K ++ LQKH EA++ + + + + E
Sbjct: 64 E-KLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEG------H 116
Query: 604 CDPAIIVERVQQLEDAYSELVKLAVERRARLEE 636
I R+ +L + L++ E+ +L +
Sbjct: 117 FASETIRTRLMELHRQWELLLEKMREKGIKLLQ 149
Score = 69.5 bits (170), Expect = 1e-13
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 381 PKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAA--RFNRKASMRETWLSE 438
P K++ ER ++ +R++KLE F R A E W+ E
Sbjct: 5 PSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQE 64
Query: 439 NQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRIN 498
++ S +N+ D ++ +KH+A E ++ A + + + +E + + I
Sbjct: 65 KLQIASDENYK-DPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIR 123
Query: 499 ARKENVLRLWNYLLELLKARRMRLE 523
R + R W LLE ++ + ++L
Sbjct: 124 TRLMELHRQWELLLEKMREKGIKLL 148
Score = 50.6 bits (121), Expect = 4e-07
Identities = 24/151 (15%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Query: 1336 VQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDI 1395
+ SG +++ E AE I + + ++ + + + ++L DS R + +++
Sbjct: 3 MDPSGVKVL----ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEEL 58
Query: 1396 DSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPD 1455
+ W+ E + +E+ D ++ +QK Q E ++ + + +L+ ++
Sbjct: 59 EKWIQEKLQIASDEN-YKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHF 117
Query: 1456 KMEEIVVKKSAVEQRFEKIKEPLLARQRALE 1486
E I + + +++E + E + + L
Sbjct: 118 ASETIRTRLMELHRQWELLLEKMREKGIKLL 148
Score = 48.7 bits (116), Expect = 2e-06
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 1988 SNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSME 2047
+ +I+E+ + ++ + R + L+ F RDA E W I ++ + S E
Sbjct: 14 AEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKW-IQEKLQIASDE 72
Query: 2048 LGLTIDEVENLIKKHEAFEKSAIAQEERFSALER 2081
++ ++KH+AFE A L+
Sbjct: 73 NYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDE 106
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP:
a.7.1.1
Length = 107
Score = 99.1 bits (247), Expect = 2e-24
Identities = 29/100 (29%), Positives = 56/100 (56%)
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
+ R + E+W+S + ++ D+ G VEA KKHE + I +E+++ A+ TV+
Sbjct: 7 LYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVA 66
Query: 484 QELEAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLE 523
+L A+ ++ + ++ +++ VL W +L E L +R RL
Sbjct: 67 DQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106
Score = 97.6 bits (243), Expect = 5e-24
Identities = 33/107 (30%), Positives = 57/107 (53%)
Query: 1593 QSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIR 1652
Q+ Q Y+ D AESWMS +E ++ +D + + L+KKHE + A+ + I
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 1653 QLGETARQLTSEMHPESDQIALKQSQVDKLYAGLKDLAGERRAKLDE 1699
L A QL ++ H S+ + K+ QV + + LK+ E+R++L +
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 92.6 bits (230), Expect = 3e-22
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 1170 QSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKIN 1229
Q+L+LQ++ RD + AE +S +E L+ D+ VE LIK+HE F + ++ KI
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 1230 GVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMETLKD 1276
+ AD+L ++HYA++ V +K + +R KE ++ L D
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 88.0 bits (218), Expect = 1e-20
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 636 ESRKLWQLYWDMADEENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLM 695
++ L D E+W+ +E ++ D + + L+ KH+ + I HE ++
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 696 SVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLDLAAFRRKRLEE 742
++ V D+L+ Q H+ ++ + + + + W++L + +R RL +
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 75.6 bits (186), Expect = 3e-16
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 742 EAVDFHQFFADAVDVDIWMLDTVRLVSSEDVGRDEANVQSLLKKHKDVTEELKNYASTIE 801
+ +D + D + WM ++++D NV++L+KKH+D + + + I
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 802 ALRNQASQLGDQD-KESPEVLERLASIEFRYKELLELAKLRKQRLLD 847
AL+ A QL Q+ S V E+ + R++ L E ++ RL D
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 75.6 bits (186), Expect = 3e-16
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 1490 EAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLIC 1549
+ + RD E + W++ + + + N+ NV L KK++ K I+ HE +I +
Sbjct: 4 DLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQ 63
Query: 1550 NNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKL 1591
+LI + H S + +++RW+ LK+ + E+RS+L
Sbjct: 64 TVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 70.6 bits (173), Expect = 2e-14
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 1699 EALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYDHVTLLWERFKEFDRDTEAIGTERV 1758
+ L L + R+ + E W++ RE + + +V L ++ ++FD+ +++
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAING-HEQKI 59
Query: 1759 AAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQML 1804
AA+ +ADQLIA H S + E + + E W+ L E + + L
Sbjct: 60 AALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 68.3 bits (167), Expect = 9e-14
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 848 ALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKHRYDGFDKEMNANASRVAV 907
L L + + + W+ ++ L +VE + +++ FDK +N + ++A
Sbjct: 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAA 61
Query: 908 VNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAEGKRDELN 952
+ +A QL+ H S + ++ Q+ W L+E KR L
Sbjct: 62 LQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106
Score = 63.3 bits (154), Expect = 6e-12
Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 1807 SRELHKFFHDCKDILGRISEK-HHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQ 1865
+ +L + DC+ +S + +D+ G+V L +KH++F + + + ++
Sbjct: 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAA 61
Query: 1866 ICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQKLGD 1912
+ + +L A + + + +V+ W L+ ++ +LGD
Sbjct: 62 LQTVADQLIAQNH-YASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 62.9 bits (153), Expect = 8e-12
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 2020 LEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSAL 2079
L++ + RD +AE+W+ A+E +L + + VE LIKKHE F+K+ E++ +AL
Sbjct: 3 LDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62
Query: 2080 ERLTTFELKELNKRKEEEERKRQEELAAK 2108
+ + +L N ++++++ +
Sbjct: 63 QTVAD-QLIAQNHYASNLVDEKRKQVLER 90
Score = 60.6 bits (147), Expect = 5e-11
Identities = 18/107 (16%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 954 AHGVQTFHIECRETVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLD 1013
+Q + +C SW+ ++ L + D + L ++ ++ + + K+
Sbjct: 2 NLDLQLYMRDCELAESWMSAREAFLNADD-DANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 1014 SLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060
+L+ A + ++ + + E+ KQ+ W L + L E+ ++L +
Sbjct: 61 ALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 59.8 bits (145), Expect = 1e-10
Identities = 21/112 (18%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 525 SLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKS 584
+L LQ ++ M + L +DD VE L++KH + IN +++ +
Sbjct: 2 NLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAA 61
Query: 585 VVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEE 636
+ + + + + ++ E+ +Q+ + + L + +E+R+RL +
Sbjct: 62 LQTVADQLIAQN------HYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 56.8 bits (137), Expect = 1e-09
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 1278 LQLHQFLQDCEELGEWVQEK-KFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRV 1336
L L +++DCE W+ + F D+ + V + +H+ F+ I ++ ++ +
Sbjct: 3 LDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAAL 62
Query: 1337 QQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFD 1381
Q +L+ + + L+ K + +++ L+ +K RL D
Sbjct: 63 QTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLGD 107
Score = 56.8 bits (137), Expect = 1e-09
Identities = 25/103 (24%), Positives = 42/103 (40%)
Query: 1915 DLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNHQSLKAEIDTREDNFTACI 1974
DL ++ WM +N + A VE L+ H+ I+ E A
Sbjct: 4 DLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQ 63
Query: 1975 SLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQ 2017
++ +L+++NHYASN + EK + + L E+ L
Sbjct: 64 TVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106
Score = 54.8 bits (132), Expect = 6e-09
Identities = 17/109 (15%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 1060 EAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYK 1119
+ DL ++RD + + W++ + + ++D ++ + E L+ +H+ + I+ + +
Sbjct: 1 QNLDLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIA 60
Query: 1120 KMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLL 1168
+ +++ A+ H + E+ K + + W L + ++ L
Sbjct: 61 ALQTVADQLIAQ--NHYASNL--VDEKRKQVLERWRHLKEGLIEKRSRL 105
Score = 54.5 bits (131), Expect = 7e-09
Identities = 20/98 (20%), Positives = 47/98 (47%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEI 1448
+ C+ +SWM+ E + +D + +V L++K + + + ++++ L+T A+
Sbjct: 9 MRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQ 68
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALE 1486
L + K+ V +R+ +KE L+ ++ L
Sbjct: 69 LIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG 106
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein
binding, structural genomics, NPPSFA; 1.70A {Mus
musculus}
Length = 126
Score = 97.8 bits (243), Expect = 1e-23
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNET--PF 2214
MEG L RK ++ + SW + +V L G L +Y KS + + +YK+
Sbjct: 3 MEGPLRRKT-LLKEGRKPALSSWTRYWVVLSGATLLYYGA-KSLRGTDRKHYKSTPGKKV 60
Query: 2215 ELRGGSAQVADDYSKKKHVFRVK-ADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGP 2273
+ G Q+ DD + +F++ D G Y FQ + W L + C+ P
Sbjct: 61 SIVGWMVQLPDDP-EHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSRPQVP 119
Query: 2274 SS 2275
++
Sbjct: 120 AN 121
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1;
guanine nucleotide exchange factor, guanine-nucleotide
releasing factor, lipoprotein; 4.50A {Mus musculus}
Length = 279
Score = 99.6 bits (247), Expect = 9e-23
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 7/150 (4%)
Query: 2156 HMEGTLVRK----HEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNE 2211
G L K H+ + A+ R W +VSL+G L+FY+ + K+
Sbjct: 12 RKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKH- 70
Query: 2212 TPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASG 2271
+ Q ++ KK VF + G +LFQ + E+ W+TA+ + C +
Sbjct: 71 -AVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAAVAR 129
Query: 2272 GPSSRSQT-LPAAEMRKDEPKRRSFFTLKK 2300
L +E++K E K +KK
Sbjct: 130 HHHKEDTLRLLKSEIKKLEQKIDMDEKMKK 159
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine
nucleotide exchange factor, alternative splicing, cell
projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Length = 263
Score = 99.3 bits (246), Expect = 1e-22
Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 2157 MEGTLVRK----HEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNET 2212
G L K + E + + R W + +V+L+G L FY+ E
Sbjct: 13 KAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNS--TEQNSAPRC 70
Query: 2213 PFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGG 2272
Q ++ KK+HVF + G YLFQA + ++ WVTA+ + C +
Sbjct: 71 ALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFAKK 130
Query: 2273 PSSRSQTLPAAEMRKDEPKRRSFFTLKKS 2301
+ ++ + K
Sbjct: 131 HGKEDTVRLLKSQTRSLLQKIDMDSKMKK 159
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein,
pleckstrin homology domain, cellular signaling,
structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Length = 136
Score = 81.5 bits (200), Expect = 6e-18
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 2141 KQARGERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLR------GTLLYFY 2194
+ EG L +A + W K + LR L F+
Sbjct: 4 GSSGNLAAKVELVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFF 63
Query: 2195 KDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254
K+++ P++ E+R + + +K + F +K +NGAEY+ + + +
Sbjct: 64 VPPKASR--PKVSIPLSAIIEVR---TTMPLEMPEKDNTFVLKVENGAEYILETIDSLQK 118
Query: 2255 NKWVTALSNVCEQQASGG 2272
+ WV + + S G
Sbjct: 119 HSWVADIQGCVDSGPSSG 136
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP,
complex, virulence, cytoplasm, membrane, polymorphism,
signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Length = 112
Score = 74.4 bits (183), Expect = 9e-16
Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 14/121 (11%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
EG L K W FV L +LY Y D+ + +
Sbjct: 2 KEGMLHYKAG----TSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSV--------NM 49
Query: 2217 RGGSAQVA--DDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPS 2274
G + + + H F+V + A+++ EM +W+ L +
Sbjct: 50 GGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKGVIPQGV 109
Query: 2275 S 2275
+
Sbjct: 110 A 110
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4;
pleckstrin homoloy domain, signal transduction,
structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Length = 109
Score = 70.9 bits (174), Expect = 1e-14
Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 16/123 (13%)
Query: 2150 SGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYK 2209
SG+ M G L R + S + W ++ ++ +LY Y + +
Sbjct: 3 SGSSGSTMSGYLYRS--------KGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQP-- 52
Query: 2210 NETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQA 2269
L G + + D + + VF++ Y+F+A + +W+ A
Sbjct: 53 ------LLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVSGP 106
Query: 2270 SGG 2272
S G
Sbjct: 107 SSG 109
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural
genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo
sapiens} SCOP: b.55.1.1
Length = 107
Score = 69.5 bits (170), Expect = 4e-14
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 13/105 (12%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
N W + S+R L+FY+D+ +K + + P L G
Sbjct: 15 NVLVNSQWKSRWCSVRDNHLHFYQDRNRSKVA-------QQPLSLVGCEVVPDPS-PDHL 66
Query: 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSR 2276
+ FR+ +AK+ EEM W+ L SG S
Sbjct: 67 YSFRILHKGEELAKLEAKSSEEMGHWLGLL-----LSESGSGPSS 106
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain,
pleckstrin homology domain-containing protein family A
member 5; NMR {Homo sapiens}
Length = 128
Score = 68.7 bits (168), Expect = 2e-13
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 2172 KRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV--ADDY 2227
K+ S + W K + L L++Y+D+K I L + ++D+
Sbjct: 29 KQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSI--------LLPSFQIALLTSEDH 80
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
+K+ F+ N Y F +EM W+ A+ + Q S GPSS
Sbjct: 81 INRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTS-GPSS 127
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual
dimerization induced by V derived sequence, signaling
protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Length = 148
Score = 68.8 bits (168), Expect = 2e-13
Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 16/160 (10%)
Query: 2138 RQEKQARGERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQ 2197
R + G G L ++ + W K + +L T+ Y+Y
Sbjct: 1 RASVGSPGIPAQDLPFVIK-AGYLEKRRK----DHSFLGFEWQKRWCALSKTVFYYYGSD 55
Query: 2198 KSAKSSPEIYYKNETPFELRGGSAQVA---DDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254
K + E + G ++ KK F + A + Y F A + ++
Sbjct: 56 KDKQQKGEFA--------IDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDA 107
Query: 2255 NKWVTALSNVCEQQASGGPSSRSQTLPAAEMRKDEPKRRS 2294
+WV L + + S + D P S
Sbjct: 108 EEWVQQLKFILQDLGSDVIPEDDEERGELYDDVDHPAAVS 147
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH
domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 117
Score = 65.5 bits (160), Expect = 1e-12
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 2172 KRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV--ADDY 2227
K+AS+ + W+K + L L++YKD+K I L D
Sbjct: 19 KQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSI--------PLLSFRVAAVQPSDN 70
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
+KH F+ + Y F A++ EE W+ A+ Q+ GPSS
Sbjct: 71 ISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQS--GPSS 116
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 72.2 bits (176), Expect = 2e-12
Identities = 95/680 (13%), Positives = 210/680 (30%), Gaps = 206/680 (30%)
Query: 1188 LSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEAND--DKINGVVQFADRLNDEDHYA 1245
+ ++ KD V + AF+ + D D ++
Sbjct: 11 TGEHQYQ-YKDILSVFED----------AFVDNFDCKDVQDMPKSILS------------ 47
Query: 1246 ADKVKKKADNINDRRNANKERAHQQMETLKDQ--LQLHQFLQDCEELG-EWVQEKKFTAQ 1302
K++ D+I ++ + TL + + +F+++ + +++ T Q
Sbjct: 48 ----KEEIDHIIMSKD-AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102
Query: 1303 DETYRSAKTVHSK----WTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKI 1358
+ + + + +Q F S L+++Q+ L++ +P +
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQA---LLELRPA------KNV 153
Query: 1359 SDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDID---------SWMNELEKQIENE 1409
G G S + + C W+N ++N
Sbjct: 154 LIDG-----------VLG-----SGKTWVALDVCLSYKVQCKMDFKIFWLN-----LKNC 192
Query: 1410 DTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQ 1469
++ + ++ Q +L Q + + D I +
Sbjct: 193 NSPETV------LEMLQ--------------KLLYQIDPNWTSRSDHSSNI-------KL 225
Query: 1470 RFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLW-----------------IAEKLPSA 1512
R I+ L R + + ++++ K W + + L +A
Sbjct: 226 RIHSIQAELR-RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 1513 KST-------------EYGNSLFNVHMLKKKNQSLAKEIDNHEPR-INLICNNGRKLIDE 1558
+T + SL + L + Q L +E+ PR +++I
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSII---------- 333
Query: 1559 GHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQS--------EKAQQY----LFDASE 1606
AE I D + W K ++ + +I+S E + + +F S
Sbjct: 334 -----AE---SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS- 384
Query: 1607 AESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMH 1666
+ + L ++ D + ++ K L + ++ + + L ++
Sbjct: 385 --AHIPTILLSLIWFD--VIKSDVMVVVNKLHKYSLVEKQPKESTISI--PSIYLELKVK 438
Query: 1667 PESDQIALKQSQVDKLYAGLKDLAGE-------------------RRAKLDEALKLFMLN 1707
E ++ AL +S VD Y K + + + E + LF
Sbjct: 439 LE-NEYALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLF--- 493
Query: 1708 REV-DDLEQWIAEREVVAGSHELGQDYDHVTLL--WERFKEFDRDTEAIGTERVAA---- 1760
R V D ++ E+++ S + L + +K + D + V A
Sbjct: 494 RMVFLDFR-FL-EQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551
Query: 1761 VNGIADQLIAAGHSDSATIA 1780
+ I + LI + ++D IA
Sbjct: 552 LPKIEENLICSKYTDLLRIA 571
Score = 68.0 bits (165), Expect = 4e-11
Identities = 90/656 (13%), Positives = 191/656 (29%), Gaps = 222/656 (33%)
Query: 401 EHERELALREEL--IRQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAA 458
+ + + +EE+ I K + T LS+ + +V + VE
Sbjct: 40 DMPKSILSKEEIDHIIMSKDAVSGTLR-----LFWTLLSKQEEMVQK--------FVE-- 84
Query: 459 AKKHEAIETDIFAYE---ERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLELL 515
E + + Y+ ++ + Y I++ + RL+N
Sbjct: 85 ----EVLRIN---YKFLMSPIKTE-QRQPSMMTRMY--IEQRD-------RLYNDNQVFA 127
Query: 516 KARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMG-------VEDLLQKH 568
K RL+ L+L+Q+ L L + + + G + D+ +
Sbjct: 128 KYNVSRLQPYLKLRQA----LLELRPAKNVLI------DG---VLGSGKTWVALDVCLSY 174
Query: 569 SLVEA-DINV----LGE--RVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYS 621
+ D + L ++V++ Q+ L + D + ++ ++ +
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK--LRIHSIQA 232
Query: 622 ELVKLAVERRARLEES----RKLWQLYWDMADEENW----IKEKEQIVSTGDIGHDLTTI 673
EL +L + E + + + W + K +++T +
Sbjct: 233 ELRRLLKSK--PYENCLLVLLNVQ-------NAKAWNAFNLSCK-ILLTTRFKQ-VTDFL 281
Query: 674 NLLLSKHKALEDEIQA-HESQLMSVIA--VG---DELVNQQH---------FGADRIRGR 718
+ + H +L+ ++ S++ + +L +
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE-----S 336
Query: 719 LQDTMAMWQNLLDLAAFRRKRLEEAVD--------------FHQF--FADAVDVDI---- 758
++D +A W N + +L ++ F + F I
Sbjct: 337 IRDGLATWDNWKHV---NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP--SAHIPTIL 391
Query: 759 ----WMLDTVRLVSSEDVGRDEANVQSLLKKHK--------DVTEELKNYASTIEALRN- 805
W D ++ V ++ + SL++K + ELK AL
Sbjct: 392 LSLIW-FDVIKSDVMVVV--NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448
Query: 806 -----QASQLGDQDKESPEVLER---------LASIE-------FRYKELLEL----AKL 840
+ D D P L++ L +IE FR L+ K+
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR-MVFLDFRFLEQKI 507
Query: 841 RKQR-----------LLDALSLYKLFSEADGVQQWIGEKDRMLATMVPGKDIEDVEIMKH 889
R L L YK +I + D +V I D
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYK---------PYICDNDPKYERLV--NAILD------ 550
Query: 890 RYDGFDKEMNANASRVAVVNQLARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKAE 945
F + ++ L+ ++ + +I L + + E+A
Sbjct: 551 ----F-------------LPKIEENLICSKYTDLLRIA-----LMAEDEAIFEEAH 584
Score = 64.9 bits (157), Expect = 3e-10
Identities = 91/638 (14%), Positives = 189/638 (29%), Gaps = 193/638 (30%)
Query: 39 ERSRIKALADERESVQKKTFQKWVNSHL----------VRVSCR----IGDLYVDLRDGK 84
S L S Q++ QK+V L ++ R + +Y++ RD
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-- 117
Query: 85 MLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLR-EQRVHLENMG----------- 132
L +V + + R + +AL LR + V ++ +
Sbjct: 118 RLYNDNQVFAKYNVSRL-------QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 133 --SHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQMKTAGYHN 190
S+ + + W + + +E + + W H+
Sbjct: 171 CLSYKVQCKMDF---KIFWLNLKNCNSPETVLEMLQKLLYQIDPN----WTSR---SDHS 220
Query: 191 VNVRNFTTSWRDGLAFNAIIHKHRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLLD 250
N++ S + L + L+ + + A NAF L LL
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW----NAF-----NLSCKILLT 271
Query: 251 AEDIFVEQPDEKSIITYVV--TYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMIHEYESL 308
K + ++ T H + H +L
Sbjct: 272 TRF--------KQVTDFLSAATTTHI-------------------------SLDHHSMTL 298
Query: 309 TSD-----LLRWIQETIASLGDRQ------FANSLVG--VQQQLLQFNNYRTVEKPPKFV 355
T D LL+++ L R+ S++ ++ L ++N++ V
Sbjct: 299 TPDEVKSLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHV------- 350
Query: 356 EKGNLEVLLFTLQSKMRANNQKPYTPKEG-KMIS----DIN-------KAWERLEKAEHE 403
N + L ++S + N +P ++ +S + W + K++
Sbjct: 351 ---NCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 404 R---ELALREELIRQEK-----LEQLAARFNRKASMRETWLSENQRLVSQDNF--GFDLG 453
+L + +Q K + + K E L ++ +V N FD
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE-NEYAL--HRSIVDHYNIPKTFDS- 461
Query: 454 AVEAAAKKHEAIETD--IFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYL 511
+ + D +++ + +H + + + + R+ +L
Sbjct: 462 --DDLIPPYL----DQYFYSH------IG----------HHLKNIEHPERMTLFRMV-FL 498
Query: 512 -LELLKARRMRLESSLQLQQSFQEML--------YILDSMEELKMRLLSDDYGKHLMGVE 562
L+ + ++ S L YI D+ + + + + L +E
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV--NAILDFLPKIE 556
Query: 563 ---------DLLQKHSLVEADINVLGERVKSVVQQSQR 591
DLL+ +L+ D + E K Q QR
Sbjct: 557 ENLICSKYTDLLRI-ALMAEDEAIFEEAHK----QVQR 589
Score = 64.5 bits (156), Expect = 5e-10
Identities = 110/762 (14%), Positives = 220/762 (28%), Gaps = 242/762 (31%)
Query: 1389 HQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEI 1448
H +D E Q + +D IL + K V ++ I
Sbjct: 1 HHHHHHMDFETGEH--QYQYKD---------ILSVFEDAFVDNFDCK--DVQDMPKS--I 45
Query: 1449 LQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKL-WIAE 1507
L K +++ I++ K AV ++ LL++Q ++ +F ++ ++
Sbjct: 46 LSKE---EIDHIIMSKDAVSGTL-RLFWTLLSKQ-----EEMVQKFVEEVLRINYKFLMS 96
Query: 1508 KL------PSAKSTEYG---NSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDE 1558
+ PS + Y + L+N NQ AK + R+
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRLYND------NQVFAK---YNVSRLQPY---------- 137
Query: 1559 GHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLF---DASEAESWMSEQE 1615
+L++A+ E R + + ++W++
Sbjct: 138 -------------------LKLRQALLELRP--------AKNVLIDGVLGSGKTWVALDV 170
Query: 1616 LY-MMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIAL 1674
V+ + +I NL + + + L + Q+ SD +
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETV--------LEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 1675 KQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQDYD 1734
+ ++ + A L+ L + + L L + ++ +
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYE--NCL-LVL-----LNV--Q--NAKAW----------- 259
Query: 1735 HVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLL 1794
F+ + + T R V D L AA + ++ L ++
Sbjct: 260 ---------NAFNLSCKILLTTRFKQV---TDFLSAATTTH-ISLDHHSMTLTPD--EVK 304
Query: 1795 EL----IETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQR-KH 1849
L ++ R Q L RE+ + + ++ E RD + T KH
Sbjct: 305 SLLLKYLDCRPQDL--PREVLT-----------TNPRRLSIIAESIRDG--LATWDNWKH 349
Query: 1850 QNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNACDARKQK 1909
N + ++S + + E A+ + +
Sbjct: 350 VNCDKLTTIIESSLNVL--EPAEYRKMFD------------------------------- 376
Query: 1910 LGDTGDLFKF----LIMVRTL-MLWMD----DVVRQMNTSEKARDV-----SGVELLMNN 1955
L F I L ++W D DV+ +N K V + +
Sbjct: 377 -----RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431
Query: 1956 HQSLKAEIDTRED---------NFTACISLGKELLSRN----------HYASNEIKEKLV 1996
+ LK +++ N + H + E E++
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491
Query: 1997 GLSNQRNALLH-RWEER--------WE------NLQLILEVYQ--FARDAAVAEAWLIAQ 2039
R L R+ E+ W N L+ Y+ + E + A
Sbjct: 492 LF---RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI 548
Query: 2040 EPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALER 2081
+L +E L + +L++ E AI EE ++R
Sbjct: 549 LDFLPKIEENLICSKYTDLLRIALMAEDEAIF-EEAHKQVQR 589
Score = 64.1 bits (155), Expect = 5e-10
Identities = 69/367 (18%), Positives = 125/367 (34%), Gaps = 97/367 (26%)
Query: 1816 DCKDIL----GRIS--EKHH--AMSDELGRDAGSVNTLQRKHQN----FLQD-LQT---- 1858
DCKD+ +S E H D + TL K + F+++ L+
Sbjct: 34 DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93
Query: 1859 LQSQVQQICNESAKLQASYAGEK----------AKEITNREAEVVNAWASLQNACDAR-- 1906
L S ++ + + + Y ++ AK +R + +L A+
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 1907 ---------KQKL-GDTGDLFKFLIMVRTLMLWMDDVVRQMNTSEKARDVSGVELLMNNH 1956
K + D +K + + W++ ++ N+ E ++
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN--LKNCNSPE---------TVLEML 202
Query: 1957 QSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALL---HRWEER- 2012
Q L +ID N+T+ + R H E++ L+ N LL + +
Sbjct: 203 QKLLYQIDP---NWTSRSDHSSNIKLRIHSIQAELRR-LLKSKPYENCLLVLLNVQNAKA 258
Query: 2013 WE--NLQ---LILEVYQFARDAAVAEAWLIAQEPYLMSME---LGLTIDEVENLIKK--- 2061
W NL L+ R V + L A +S++ + LT DEV++L+ K
Sbjct: 259 WNAFNLSCKILLT-----TRFKQVTDF-LSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 2062 -------HEA-----FEKSAIAQE--------ERF--SALERLTTFELKELNKRKEEEER 2099
E S IA+ + + ++LTT LN + E R
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372
Query: 2100 KRQEELA 2106
K + L+
Sbjct: 373 KMFDRLS 379
Score = 52.2 bits (124), Expect = 2e-06
Identities = 45/330 (13%), Positives = 98/330 (29%), Gaps = 89/330 (26%)
Query: 970 WI-EDK-KRILQS--TDSLEMDLTGIMT-LQRRLSGMERDLAAIQAKLDSLEAEAVAIEK 1024
W K + ++Q + L ++ +M+ ++ + D L + K
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 1025 EH---PEEAEAIRERIKQIR----IIWEQLTQML---KE-------RDAKLEEAGDLHRF 1067
+ + +R+ + ++R ++ + +L K K++ D
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVL---IDGVLGSGKTWVALDVCLSYKVQCKMD---- 181
Query: 1068 LRDLDHFQV-WLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGE 1126
F++ WL + + ++P E +L Q + +ID ++ D+
Sbjct: 182 ------FKIFWLN-----LKNCNSP------ETVLEMLQKLLYQID---PNWTSRSDHSS 221
Query: 1127 KVTAEPSTHDDPQYMFLRER-----LKALRDGWEELHKMWENRQQLLSQSLNLQ----MF 1177
+ + L+ + L L + K W + NL +
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA--KAWN--------AFNLSCKILLT 271
Query: 1178 NRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFL--TTMEAND-----DKIN- 1229
R + + L + +S D + L E L D N
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK----SLLLKYLDCRPQDLPREVLTTNP 327
Query: 1230 -GVVQFADRLNDE-------DHYAADKVKK 1251
+ A+ + D H DK+
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTT 357
Score = 42.1 bits (98), Expect = 0.003
Identities = 53/510 (10%), Positives = 133/510 (26%), Gaps = 147/510 (28%)
Query: 1828 HHAMSDELGR-DAGSVNTLQRKHQNFLQDLQTLQSQVQQICNE-SAKLQASYAGEKAKEI 1885
HH M E G + L F+ + C + ++ + E+ I
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFD---------CKDVQDMPKSILSKEEIDHI 54
Query: 1886 TNREAEVVNA----WASLQNACDARKQKLGDTGDL-FKFLIMVRTLMLWMDDVVRQMNTS 1940
+ V W L + ++ + + + +KFL M + +
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL---------MSPIKTEQRQP 105
Query: 1941 EKARD--VSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGL 1998
+ + L N++Q +R + ++++ L+ L
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL------------------KLRQALLEL 147
Query: 1999 SNQRNALLH-------RWEERWENLQLILEVYQFARDAAVAEA------WL-IAQEPYLM 2044
+N L+ W + L+V V WL +
Sbjct: 148 RPAKNVLIDGVLGSGKTW--------VALDV---CLSYKVQCKMDFKIFWLNLKNC---- 192
Query: 2045 SMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEE 2104
++ ++ L+ + + + ++ + S + +L ++ R+ + + +
Sbjct: 193 -NSPETVLEMLQKLLYQ---IDPNWTSRSDHSSNI-KLRIHSIQA-ELRRLLKSKPYENC 246
Query: 2105 L----------AAK------QTPPTSPDQSAKDRLDGEEVK----DKEKEGESRQE---- 2140
L A + T+ + D L D + E
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 2141 -------------KQARGERPTSGADADHMEGTLVRKH-----EWEAIAKRASNRSWDKI 2182
++ P + + +R W+ + +
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLS----IIAESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 2183 FVSLRGTLLY-FYKD----QKSAKSSP---EIYYKNETPFELRGGSAQVADDYSKKKHVF 2234
L + SA + + + ++ V + K V
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM----VVVNKLHKYSLVE 418
Query: 2235 RVKADNGA--------EYLFQAKNDEEMNK 2256
+ + E + +N+ +++
Sbjct: 419 K-QPKESTISIPSIYLELKVKLENEYALHR 447
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid
degradation, phosphatidylinositol (3, 4)-bisphosphate,
signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Length = 125
Score = 65.2 bits (159), Expect = 2e-12
Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 2172 KRAS-NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA---DDY 2227
K+ + ++W + + L + ++K + + I L+ D
Sbjct: 22 KQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVI--------PLKEVHKVQECKQSDI 73
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQ 2278
+ ++F + + + QA + EEM+ W+ A+S Q G S+ S+
Sbjct: 74 MMRDNLFEIVTTSRT-FYVQADSPEEMHSWIKAVSGAIVAQRGPGRSASSE 123
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 115
Score = 64.0 bits (156), Expect = 4e-12
Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 10/107 (9%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSA-QVADDYSKK 2230
K ++W + + L+ ++ +Y + +I L + D K
Sbjct: 17 KGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDI--------LLDENCCVESLPDKDGK 68
Query: 2231 KHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRS 2277
K +F VK + A + ++ +W+ A+ + G S
Sbjct: 69 KCLFLVKC-FDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSSGPSS 114
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain,
phosphatidylinositol binding, structural genomics; NMR
{Homo sapiens} SCOP: b.55.1.1
Length = 118
Score = 63.6 bits (155), Expect = 6e-12
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 17/110 (15%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQ--VADDYSK 2229
+R+ ++W + + LR LY+YKD++ K +Y L G + + +
Sbjct: 17 QRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMY--------LPGCTIKEIATNPEEA 68
Query: 2230 KKHVFRVKADNGAE-------YLFQAKNDEEMNKWVTALSNVCEQQASGG 2272
K VF + + + Y+ A + EM +WV L V S G
Sbjct: 69 GKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGPSSG 118
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: b.55.1.1
Length = 149
Score = 64.4 bits (156), Expect = 7e-12
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 22/162 (13%)
Query: 2135 GESRQEKQARGERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFY 2194
G S Q ER A + EG L+ K R+ R ++ + LRGT L+FY
Sbjct: 1 GSSGSSGQ---ERLKITALPLYFEGFLLIK--------RSGYREYEHYWTELRGTTLFFY 49
Query: 2195 KDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK-KHVFRVKADNGAEYLFQAKNDEE 2253
D+KS ++ ++ + + ++K F + E + +N E
Sbjct: 50 TDKKSIIYVDKL--------DIVDLTCLTEQNSTEKNCAKFTLVLPKE-EVQLKTENTES 100
Query: 2254 MNKWVTALSNVCEQQASGGPSS-RSQTLPAAEMRKDEPKRRS 2294
+W + V E S Q + E+ + E KRR
Sbjct: 101 GEEWRGFILTVTELSVPQNVSLLPGQVIKLHEVLEREKKRRI 142
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain,
signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Length = 108
Score = 62.1 bits (151), Expect = 1e-11
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 15/110 (13%)
Query: 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELR 2217
+G L +K + W K + + L Y+Y ++KS + ++
Sbjct: 6 QGYLEKKSK----DHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTF--------LIK 53
Query: 2218 GGSAQVA---DDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
G S ++A SKK+ F + + + Y F A + E WV +S +
Sbjct: 54 GYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 103
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 69.3 bits (169), Expect = 2e-11
Identities = 82/539 (15%), Positives = 149/539 (27%), Gaps = 229/539 (42%)
Query: 527 QLQQSFQEML------YILD----SMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADIN 576
QLQ+ F ++L + D + EL + L Y V L++ + + D
Sbjct: 32 QLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLG--Y------VSSLVEPSKVGQFD-Q 82
Query: 577 VLGERVKSVVQQ-SQRFLDEETNE------GFRPCDPAIIVERVQQLEDAY--------- 620
VL + + +L E N+ + +V+ + +++
Sbjct: 83 VL----NLCLTEFENCYL--EGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRP 136
Query: 621 ------SELVKLAVERRARL--------------EESRKLWQLYWDMADE---------- 650
S L + E A+L EE R L+Q Y + +
Sbjct: 137 FDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLS 196
Query: 651 -------------------ENWIKEKEQI----------VSTGDIG-----HDLTTINLL 676
W++ +S IG H + T LL
Sbjct: 197 ELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLL 256
Query: 677 LSKHKALEDEIQA---HESQLMS--VIAVGDELVNQQHFGADRIRGRLQDTMAMWQNLLD 731
L ++ H L++ IA D W++
Sbjct: 257 GFTPGELRSYLKGATGHSQGLVTAVAIAETDS----------------------WESFFV 294
Query: 732 LA----------------AFRRKRLEEAVDFHQFFADAVDVDI----WMLDTVRLVSSED 771
A+ L ++ D+++ + ML ++
Sbjct: 295 SVRKAITVLFFIGVRCYEAYPNTSLPPSI-----LEDSLENNEGVPSPML-SIS------ 342
Query: 772 VGRDEANVQSLLKKHKDVTEELKNYASTIE-ALRNQASQL---GDQDKESPEVLERLASI 827
+ VQ + K L +E +L N A L G P+ L L
Sbjct: 343 -NLTQEQVQDYVNK---TNSHLPA-GKQVEISLVNGAKNLVVSG-----PPQSLYGLNL- 391
Query: 828 EFRYKELLELAKLRKQRLLDALSLYKL-FSEADGVQQWIGEK----DRMLATMVP----- 877
LRK + L ++ FSE K +R L P
Sbjct: 392 -----------TLRKAKAPSGLDQSRIPFSE---------RKLKFSNRFLPVASPFHSHL 431
Query: 878 --------GKDIEDVEI------MK----HRYDGFD-KEMNANASRVAVVNQLARQLLH 917
KD+ + ++ +DG D + ++ + S +V+ + R +
Sbjct: 432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISE-RIVDCIIRLPVK 489
Score = 65.8 bits (160), Expect = 2e-10
Identities = 89/658 (13%), Positives = 175/658 (26%), Gaps = 255/658 (38%)
Query: 1428 IETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVK---KSAVEQRFEKIKEPLLARQRA 1484
+E + V E K +P+ E + E L+ +
Sbjct: 16 LEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE---------LVGK--- 63
Query: 1485 LEKKKEAY-QFRRDIEDEKLWIAEKLPSAKSTEYGNSL------FNVHMLKKKN-QSLAK 1536
+ + ++ + +K ++ L F L+ + +LA
Sbjct: 64 -------FLGY----------VSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAA 106
Query: 1537 EIDNHEP-----RINLI------CNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVD 1585
++ LI ++ D+ SA L +AV
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSN-SA---------------LFRAVG 150
Query: 1586 ERRSKLIQSEKAQ---QYLFDASEAESWMSE-QELYMMVEDRGKDEISTQNLMKKHETLE 1641
E ++L+ A Q + + E ++LY
Sbjct: 151 EGNAQLV----AIFGGQ-----GNTDDYFEELRDLY------------------------ 177
Query: 1642 LAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLY-AGLKDLAGERRAKLDEA 1700
+ Y + L + + + SE+ + +K++ GL
Sbjct: 178 ---QTYHVLVGDLIKFSAETLSELIRTT-------LDAEKVFTQGL-------------- 213
Query: 1701 LKLFMLNREVDDLEQWIAEREVVAGSHELGQDY-DHV-------TLLWERFKEFDRDTEA 1752
++ +W+ +DY + ++ + + +
Sbjct: 214 -----------NILEWLENPSNTP-----DKDYLLSIPISCPLIGVI--QLAHYVVTAKL 255
Query: 1753 IG------TERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQDLLELIETRTQMLVA 1806
+G + G + L+ A IAE W+
Sbjct: 256 LGFTPGELRSYLKGATGHSQGLVTA-----VAIAETDS-----WESFFVS---------V 296
Query: 1807 SRELHKFFH---DCKDILGRISEKHHAMSDELGRDAG------SVNTLQRKHQNFLQDLQ 1857
+ + F C + S + D L + G S++ L ++
Sbjct: 297 RKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQ-------- 348
Query: 1858 TLQSQVQQICNESAKLQASYAGEKAKEIT--N-REAEVV--NAWASLQNACDA-RKQKLG 1911
+Q V + N K EI+ N + VV SL RK K
Sbjct: 349 -VQDYVNK-TNSHL------PAGKQVEISLVNGAKNLVVSGPP-QSLYGLNLTLRKAKAP 399
Query: 1912 DTGD----LF---KFLIMVRTLML-------WMDDVVRQMNTSEKARDVSGVELLMNNHQ 1957
D F K R L + + +N D+ + N +
Sbjct: 400 SGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINK-----DLVKNNVSF-NAK 453
Query: 1958 SLKAEI-DTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQRNALLH---RWEE 2011
++ + DT D G +L R S I E++V + ++ +WE
Sbjct: 454 DIQIPVYDT-FD--------GSDL--RVL--SGSISERIV------DCIIRLPVKWET 492
Score = 61.2 bits (148), Expect = 4e-09
Identities = 89/546 (16%), Positives = 174/546 (31%), Gaps = 179/546 (32%)
Query: 1731 QDYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQ--LIAA--GHSDSATIAEWKDGL 1786
+ + L E+F TE AA + L+ G+ S +
Sbjct: 25 ASFFIASQLQEQFN----KILPEPTEGFAADDEPTTPAELVGKFLGYVSS----LVEPSK 76
Query: 1787 NEAWQDLLELIETRTQMLVASRELHKFFHDC---KDILGRISEKHHAMSDELGRDAGSVN 1843
+ +L L L +F + DI HA++ +L
Sbjct: 77 VGQFDQVLNLC------------LTEFENCYLEGNDI--------HALAAKL-------- 108
Query: 1844 TLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNAWASLQNAC 1903
LQ+ T + +++ ++ A+ + R + + ++L A
Sbjct: 109 ---------LQENDTTLVKTKEL------IKNYIT---ARIMAKRPFDKKSN-SALFRAV 149
Query: 1904 DARKQKL-------GDTGDLFKFLIMVRTL----MLWMDDVVRQMNT--SEKARDVSGVE 1950
+L G+T D F+ L R L + + D+++ SE R E
Sbjct: 150 GEGNAQLVAIFGGQGNTDDYFEEL---RDLYQTYHVLVGDLIKFSAETLSELIRTTLDAE 206
Query: 1951 LL----MNNHQSLKAEIDTREDNF--TACISL---GKELLSRNHYAS---------NEIK 1992
+ +N + L+ +T + ++ + IS G ++ HY E++
Sbjct: 207 KVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIG--VIQLAHYVVTAKLLGFTPGELR 264
Query: 1993 EKLVGLSNQRNALL--------HRWEERWENLQLILEV--------YQFARDAAVAEAWL 2036
L G + L+ WE + +++ + V Y+ + ++ +
Sbjct: 265 SYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPS-- 322
Query: 2037 IAQE--------PYLMSMEL---GLTIDEVENLIKK---HEAFEKS-AIA---QEERF-- 2076
I ++ P M L LT ++V++ + K H K I+ +
Sbjct: 323 ILEDSLENNEGVPSPM---LSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVV 379
Query: 2077 ----SALERLTTFELKELNKRKEEEE--------RKRQEELAAKQTPPTSPDQS-----A 2119
+L L L K K +R+ + + + P SP S A
Sbjct: 380 SGPPQSLYGLNL----TLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPA 435
Query: 2120 KDRLDGEEVKDKEKEGESRQEKQARGERP----TSGADADHMEGTLVRKH---------E 2166
D ++ KD K S K + P G+D + G++ + +
Sbjct: 436 SDLIN----KDLVKNNVSFNAKDIQ--IPVYDTFDGSDLRVLSGSISERIVDCIIRLPVK 489
Query: 2167 WEAIAK 2172
WE +
Sbjct: 490 WETTTQ 495
Score = 58.5 bits (141), Expect = 3e-08
Identities = 95/590 (16%), Positives = 160/590 (27%), Gaps = 213/590 (36%)
Query: 660 IVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGD------ELVNQ-QHFGA 712
+S G + H L L+++ + A D ELV + + +
Sbjct: 10 TLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVS 69
Query: 713 DRIRGRLQDTMAMWQNLLDLA--AFRRKRLEEAVDFHQFFADAVDVDIWMLDTVRLVSSE 770
+ + + +L+L F LE D H +L+
Sbjct: 70 SLVE---PSKVGQFDQVLNLCLTEFENCYLEGN-DIHAL-------------AAKLLQEN 112
Query: 771 DVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLE-------R 823
D + L K K++ +KNY I A R A + D+ S + +
Sbjct: 113 D---------TTLVKTKEL---IKNY---ITA-RIMAKRPFDKKSNSA-LFRAVGEGNAQ 155
Query: 824 LASIEF-------RY-KELLELAKLRKQRLLDALSLYKLFSEADGVQQWIGEKDRMLATM 875
L +I F Y +EL +L Y+ + V I L+ +
Sbjct: 156 LVAI-FGGQGNTDDYFEELRDL--------------YQTYHVL--VGDLIKFSAETLSEL 198
Query: 876 VPGKDIEDVEIMKHRYDGFD-KEMNANASRVAVVNQLAR-----------QLLHVEHPNS 923
+ + D E K G + E N S + L QL H
Sbjct: 199 I--RTTLDAE--KVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYV---- 250
Query: 924 EQIVTRQNQLNHDWAGLREKAEGKRDELNSAHGVQT------------------------ 959
+ + LR +G + G+ T
Sbjct: 251 --VTAKLLGFTP--GELRSYLKGA---TGHSQGLVTAVAIAETDSWESFFVSVRKAITVL 303
Query: 960 FHI--ECRETVSWIEDKKRILQSTDSLE--------M----DLTGIMTLQRR-------- 997
F I C E IL+ DSLE M +LT +Q
Sbjct: 304 FFIGVRCYEAYPNTSLPPSILE--DSLENNEGVPSPMLSISNLT-QEQVQDYVNKTNSHL 360
Query: 998 ------------------LSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQ 1039
+SG + L + L +A + + P ER +
Sbjct: 361 PAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIP-----FSER--K 413
Query: 1040 IRIIWEQL-------TQMLKERDAKLEEAGDLHRF-----LRDLDHFQVWLTKTQTDVAS 1087
++ L + +L + + DL + +D+ V+ T +D+
Sbjct: 414 LKFSNRFLPVASPFHSHLLVPASDLINK--DLVKNNVSFNAKDI-QIPVYDTFDGSDLRV 470
Query: 1088 EDT--PSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTH 1135
+ D IR + E T +TH
Sbjct: 471 LSGSISERIVD--------CIIRLPVK------------WETTTQFKATH 500
Score = 57.8 bits (139), Expect = 6e-08
Identities = 93/620 (15%), Positives = 182/620 (29%), Gaps = 232/620 (37%)
Query: 1063 DLHRFLRDL-DHFQVWLTKTQTDVASEDTPSSLAD-AEKLLN--QHQAIREEIDNYTEDY 1118
L + F L + A++D P++ A+ K L ++ + +
Sbjct: 25 ASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVL 84
Query: 1119 KKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFN 1178
+ E +L ++H L+ L +
Sbjct: 85 NLCLTEFENC-------------YLEG---------NDIH--------ALAAKLLQENDT 114
Query: 1179 RDAKQAEVLLS--QQEHVLSKDETPVNLEQVENLIKRHE-AFLTTMEANDDKINGVVQF- 1234
K E++ + + + P + K+ A + + ++ V F
Sbjct: 115 TLVKTKELIKNYITARIMAKR---PFD--------KKSNSALFRAVGEGNAQL--VAIFG 161
Query: 1235 ----ADRLNDE-----DHYA---ADKVKKKADNIND--RRNANKERAHQQ----METLKD 1276
D +E Y D +K A+ +++ R + E+ Q +E L++
Sbjct: 162 GQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLEN 221
Query: 1277 Q---------------------LQLHQFLQDCEELGEWVQEKKFT-AQDETYRSAKTVHS 1314
+QL ++ + LG FT + +Y T HS
Sbjct: 222 PSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLG-------FTPGELRSYLKGATGHS 274
Query: 1315 K-------------WTRHQAFEAEIASNKDRLL-----RVQQS------GSELMKEKPEL 1350
+ W ++F +L R ++ ++++ E
Sbjct: 275 QGLVTAVAIAETDSW---ESFF-VSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLEN 330
Query: 1351 AELIGPK-----ISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQ 1405
E G IS+L Q + ++ +++T + + KQ
Sbjct: 331 NE--GVPSPMLSISNLTQ--EQVQD----------------YVNKTNSHLPA-----GKQ 365
Query: 1406 IE----NED-----TG--SDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVP 1454
+E N +G L +N+ ++K KA S L+ Q+ I
Sbjct: 366 VEISLVNGAKNLVVSGPPQSLYGLNLTLRK---------AKAP--SGLD-QSRI------ 407
Query: 1455 DKMEEIVVKKSAVEQRFEKIKEP----LLARQRALEKKKEAYQFRRDIEDEKL-WIAEKL 1509
E +K RF + P LL A + + D+ + + A+ +
Sbjct: 408 -PFSE---RKLKFSNRFLPVASPFHSHLLV--PASDLINK------DLVKNNVSFNAKDI 455
Query: 1510 --PSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRI-NLICNNGRKLID--EGHEDSA 1564
P T G+ L + L+ I RI + I R + + A
Sbjct: 456 QIP-VYDTFDGSDL----------RVLSGSIS---ERIVDCII---RLPVKWETTTQFKA 498
Query: 1565 ----EF----TSLIEDLMDR 1576
+F S + L R
Sbjct: 499 THILDFGPGGASGLGVLTHR 518
Score = 51.6 bits (123), Expect = 4e-06
Identities = 36/249 (14%), Positives = 71/249 (28%), Gaps = 77/249 (30%)
Query: 629 ERRARLEESRKLWQLYWDMADE---ENW-------IKE--KEQIVS-TGDIGHDLTTINL 675
+ + ++ +W + AD + + + + G+ G + N
Sbjct: 1634 DLYKTSKAAQDVW----NRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRE-NY 1688
Query: 676 LLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQN------L 729
+ + D E + +E F +++ G L T Q L
Sbjct: 1689 SAMIFETIVDGKLKTEKIFKEI----NEHSTSYTFRSEK--GLLSAT----QFTQPALTL 1738
Query: 730 LDLAAFRRKRLEEAVDFHQFFA--------------DAVDVDIWMLDTVRLVS------S 769
++ AAF + + + FA D + ++ V +V
Sbjct: 1739 MEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIE----SLVEVVFYRGMTMQ 1794
Query: 770 EDVGRDEANVQSLLKKHKDVTEELKNYASTIEALRNQASQLGDQDKESPEVLERLASIEF 829
V RDE NY + A+ + V+ER+
Sbjct: 1795 VAVPRDELG--------------RSNYG--MIAINPGRVAASFSQEALQYVVERVGK--- 1835
Query: 830 RYKELLELA 838
R L+E+
Sbjct: 1836 RTGWLVEIV 1844
Score = 51.6 bits (123), Expect = 4e-06
Identities = 90/591 (15%), Positives = 176/591 (29%), Gaps = 217/591 (36%)
Query: 98 LPRPTKGKMR----IHCLENVDKALQFLREQRVHLENMGSHDIVDGNPRLSLGLIWTIIL 153
LP PT+G E V K L ++ V +G D V L L L
Sbjct: 41 LPEPTEGFAADDEPTTPAELVGKFLGYV-SSLVEPSKVGQFDQV---LNLCLTEFENCYL 96
Query: 154 RFQ-IQDITIEETDNQETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAIIHK 212
I + + +T K L+ +N+ A I
Sbjct: 97 EGNDIHALAAKLLQENDTTLVKTKELI--------------KNY---------ITARIMA 133
Query: 213 HRPDLIQFEKLSKSNAIYNLNNAFTVAEDKLGLTKLL-------DAEDIFVEQPDE-KSI 264
RP F+K S S A+ F + G +L+ + +D F +E + +
Sbjct: 134 KRP----FDKKSNS-AL------FRAVGE--GNAQLVAIFGGQGNTDDYF----EELRDL 176
Query: 265 ITYVVTYYHYFSKMKQETVQ--GKRIGKVVGIAMDNDRMIHEYESLTSDLLRWIQETIAS 322
Y Y + + ++ + + +++ +D ++ + ++L W++ ++
Sbjct: 177 ------YQTYHV-LVGDLIKFSAETLSELIRTTLDAEK----VFTQGLNILEWLENP-SN 224
Query: 323 LGDRQFANS------LVGVQQQLLQFNNYRTVEK-----PPKFVEK-----GNLEVLL-- 364
D+ + S L+G ++Q +Y K P + G+ + L+
Sbjct: 225 TPDKDYLLSIPISCPLIG----VIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTA 280
Query: 365 -----------FTLQSKM----------RANNQKPYTPKEGKMISDINKAWERLEKAEHE 403
F + + R P T ++ D E+
Sbjct: 281 VAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDS---------LENN 331
Query: 404 RE-----LALREELIRQEKLEQLAARFNRKASMRETWLSENQR----LV-SQDNF---GF 450
L++ + QE+++ + N L ++ LV N G
Sbjct: 332 EGVPSPMLSISN--LTQEQVQDYVNKTNSH-------LPAGKQVEISLVNGAKNLVVSGP 382
Query: 451 --DLGAVEAAAKKHEA-IETDIFA--YEER--------------------VQAVVTVSQE 485
L + +K +A D + ER V A ++++
Sbjct: 383 PQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKD 442
Query: 486 LEAEK------------YHDIDRINARK--ENVLRLWNYLLELLKARRMRLESSLQLQQS 531
L Y D + R ++ +++ + ++ E++ Q + +
Sbjct: 443 LVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISER---IVDCIIRLPVKWETTTQFKAT 499
Query: 532 FQEMLYILD-------SMEELKMRLL-----------------SDDYG-KH 557
+ILD + L R DDYG K
Sbjct: 500 -----HILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGFKQ 545
Score = 50.8 bits (121), Expect = 6e-06
Identities = 51/323 (15%), Positives = 91/323 (28%), Gaps = 122/323 (37%)
Query: 1517 YGNS-----LFN---VHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTS 1568
Y S ++N H S+ +I + P I G K G +++
Sbjct: 1636 YKTSKAAQDVWNRADNHFKDTYGFSIL-DIVINNPVNLTIHFGGEK----GKRIRENYSA 1690
Query: 1569 LI-EDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDE 1627
+I E ++D + +K E +E + Y F + + L
Sbjct: 1691 MIFETIVDGKLKTEKIFKE------INEHSTSYTFRSEKGL-------LS---------- 1727
Query: 1628 ISTQN----LMKKHETLELAVEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLY 1683
+TQ L +E A + D ++ G D +
Sbjct: 1728 -ATQFTQPALT----LMEKAA--FED-LKSKGLI--------------------PADATF 1759
Query: 1684 AG--LKDLAGERRA--------KLDEALKLFMLNREVDDLEQWIAER-----EVVAGSHE 1728
AG L GE A ++ +++ + R V
Sbjct: 1760 AGHSL----GEYAALASLADVMSIESLVEV-------------VFYRGMTMQVAVPRDEL 1802
Query: 1729 LGQDYDHVTLLWERF-KEFDRDTEAIGTERVAAVNG----IA------DQLIAAGHSDSA 1777
+Y + + R F ++ ERV G I Q +AAG
Sbjct: 1803 GRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGD---- 1858
Query: 1778 TIAEWKDGLNEAWQDLLELIETR 1800
L+ ++L I+ +
Sbjct: 1859 -----LRALDTV-TNVLNFIKLQ 1875
Score = 49.7 bits (118), Expect = 1e-05
Identities = 80/617 (12%), Positives = 153/617 (24%), Gaps = 255/617 (41%)
Query: 892 DGFDKEMNANASRVAVVNQ-------LARQLLHVEHPNSEQIVTRQNQLNHDWAGLREKA 944
+ F+K + A ++ + + L +V +
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSL------------------VEPSK 76
Query: 945 EGKRDE-LNSAHGVQTFHIECRETVSWIEDKKRILQSTD------SLEMDLTGIMTLQRR 997
G+ D+ LN + F L+ D L + + +
Sbjct: 77 VGQFDQVLNLC--LTEFE-------------NCYLEGNDIHALAAKLLQENDTTLVKTKE 121
Query: 998 LSGMERDLAAIQAKLDSLEAEAVAIEKEHP----EEAEAIRERI--------------KQ 1039
L I+ + + +K+ ++ ++
Sbjct: 122 L---------IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEE 172
Query: 1040 IRIIWE-----------QLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASE 1088
+R +++ + L E +A + F + L+ WL
Sbjct: 173 LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV--FTQGLN-ILEWLENP------S 223
Query: 1089 DTPSS--LADAE---KLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPS--THDDPQYM 1141
+TP L L+ Q +Y VTA+ T +
Sbjct: 224 NTPDKDYLLSIPISCPLIGVIQLA-----HYV------------VTAKLLGFTPGE---- 262
Query: 1142 FLRERLK---------------ALRDGWEELHKMWENRQQLL------SQSLNLQMFNRD 1180
LR LK A D WE +L + +
Sbjct: 263 -LRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY----EAYPNT 317
Query: 1181 AKQAEVLLSQQEHVLSKDE---TP------VNLEQVENLIKRHEAFLTTMEANDDKINGV 1231
+ +L E+ +E +P + EQV++ + +K N
Sbjct: 318 SLPPSILEDSLEN----NEGVPSPMLSISNLTQEQVQDYV--------------NKTNS- 358
Query: 1232 VQFADRLNDEDH-YAADKVKKKADNINDRRN------ANKERAHQQMETLKDQLQLHQFL 1284
L + +N +N Q + L L+
Sbjct: 359 -----HLPAGKQVEIS--------LVNGAKNLVVSGPP------QSLYGLNLTLR----- 394
Query: 1285 QDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQQSG---S 1341
K A +S + S+ R F R L V + S
Sbjct: 395 -------------KAKAPSGLDQS-RIPFSE--RKLKFSN-------RFLPV--ASPFHS 429
Query: 1342 ELMKEKPEL--AELIGPKI----SDLG-QQFD-----DLETTTKDKGERLFDSNREVLIH 1389
L+ +L +L+ + D+ +D DL + ER+ D +I
Sbjct: 430 HLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD----CIIR 485
Query: 1390 QTCDDIDSWMNELEKQI 1406
W + +
Sbjct: 486 LPVK----WETTTQFKA 498
Score = 49.3 bits (117), Expect = 2e-05
Identities = 53/316 (16%), Positives = 107/316 (33%), Gaps = 94/316 (29%)
Query: 1614 QELYMMVEDRGKDEISTQNLMKKHETLELAVEDYAD--TIRQLGETARQLTSEMHPESDQ 1671
QE M G D T + V + AD G + + +P +
Sbjct: 1627 QEQGM-----GMDLYKTSKAAQD-------VWNRADNHFKDTYGFSILDIVIN-NPVNLT 1673
Query: 1672 IALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAEREVVAGSHELGQ 1731
I + ++ + E +D LK + +E+++
Sbjct: 1674 IHFGGEKGKRIRENYSAMIFE--TIVDGKLKTEKIFKEINE------------------- 1712
Query: 1732 DYDHVTLLWERFKEFDRDTE----AIGTERVAAV-----NGIADQLIA-AGHS---DSA- 1777
+ + K T+ A+ AA G+ AGHS +A
Sbjct: 1713 --HSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAAL 1770
Query: 1778 -TIAEWKDGLNEAWQDLLELIETR---TQMLVASRELHKFFHDCKDIL-GRIS-----EK 1827
++A D ++ + L+E++ R Q+ V EL + + I GR++ E
Sbjct: 1771 ASLA---DVMS--IESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEA 1825
Query: 1828 HHAMSDELGRDAGSVNTLQRKHQ--NF------------LQDLQTLQS-----QVQQICN 1868
+ + +G+ G + + + N+ L+ L T+ + ++Q+I
Sbjct: 1826 LQYVVERVGKRTGWL--V----EIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKI-- 1877
Query: 1869 ESAKLQASYAGEKAKE 1884
+ +LQ S + E+ +
Sbjct: 1878 DIIELQKSLSLEEVEG 1893
Score = 40.8 bits (95), Expect = 0.008
Identities = 65/399 (16%), Positives = 112/399 (28%), Gaps = 168/399 (42%)
Query: 168 QETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFNAI-IHKHRP-DLIQFEKLSK 225
+ +K+A+D +W A H ++D F+ + I + P +L K
Sbjct: 1637 KTSKAAQD---VW---NRADNH----------FKDTYGFSILDIVINNPVNLTIHFGGEK 1680
Query: 226 SNAIYNLNNAFTVAEDKLGLTKLLDAEDIFVEQPDEKSIITY-----------------V 268
I +A G K E IF E + + T+
Sbjct: 1681 GKRIRENYSAMIFETIVDGKLK---TEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALT 1737
Query: 269 VTYYHYFSKMKQETVQGKRIGKVVGIAMDNDRMI-H---EYESLTS--DLLRWIQETIAS 322
+ F +K + G+ + H EY +L S D++ S
Sbjct: 1738 LMEKAAFEDLKSK-----------GLIPADATFAGHSLGEYAALASLADVM--------S 1778
Query: 323 LGDRQFANSLVGVQQQLLQFNNYR--TVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYT 380
+ +V YR T++ E G M A N
Sbjct: 1779 IES---LVEVV----------FYRGMTMQVAVPRDELGRSNY-------GMIAIN----- 1813
Query: 381 PKEGKMISDINKAWERLEKAEHERELALREELIRQ--EKLEQLAARFNRKASMRETWLSE 438
P G++ + + E + + E + ++ +E +N E
Sbjct: 1814 P--GRVAASFS--------QEALQYVV--ERVGKRTGWLVE--IVNYN----------VE 1849
Query: 439 NQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRIN 498
NQ+ V AA A++T V+ L K ID I
Sbjct: 1850 NQQYV--------------AAGDLRALDT--------------VTNVLNFIKLQKIDII- 1880
Query: 499 ARKENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLY 537
L+ SL L++ + L+
Sbjct: 1881 ----------------------ELQKSLSLEE-VEGHLF 1896
Score = 40.4 bits (94), Expect = 0.010
Identities = 57/314 (18%), Positives = 98/314 (31%), Gaps = 97/314 (30%)
Query: 444 SQD-NFGFDLGAVEAAAKK--HEAIETDIF---AYEERVQAVV-------TV------SQ 484
SQ+ G DL AA+ + A D Y + +V T+ +
Sbjct: 1626 SQEQGMGMDLYKTSKAAQDVWNRA---DNHFKDTYGFSILDIVINNPVNLTIHFGGEKGK 1682
Query: 485 EL----EAEKYHDIDRINARKENVLRLWNYLLELLKARRMRLESS---LQLQQSFQ-EML 536
+ A + I + E + + N + S L Q Q +
Sbjct: 1683 RIRENYSAMIFETIVDGKLKTEKIFKEINE-----HSTSYTFRSEKGLLSATQFTQPALT 1737
Query: 537 YILDSM---EELKMRLLSDDYGKHLMGVEDLLQKHSL--------------VEADINVLG 579
L E+LK + L G HSL +E+ + V+
Sbjct: 1738 --LMEKAAFEDLKSKGLIPA-DATFAG-------HSLGEYAALASLADVMSIESLVEVVF 1787
Query: 580 ERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEESRK 639
R ++ R +N G +P + Q E ++ VER
Sbjct: 1788 YRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQ------EALQYVVER--------- 1832
Query: 640 LWQLYWDMADEENWIKE-------KEQIVSTGDIGHDLTTINLLLS--KHKALEDEIQAH 690
+ W+ E +Q V+ GD+ L T+ +L+ K + + D I+
Sbjct: 1833 -------VGKRTGWLVEIVNYNVENQQYVAAGDL-RALDTVTNVLNFIKLQKI-DIIELQ 1883
Query: 691 ESQLMSVIAVGDEL 704
+S +S+ V L
Sbjct: 1884 KS--LSLEEVEGHL 1895
Score = 36.2 bits (83), Expect = 0.19
Identities = 56/296 (18%), Positives = 97/296 (32%), Gaps = 91/296 (30%)
Query: 1242 DHY----AADKVKKKADN---------IND--RRNANKERAH---QQMETLKDQLQLHQF 1283
D Y AA V +ADN I D N H ++ + +++ F
Sbjct: 1634 DLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIF 1693
Query: 1284 LQDCEELGEWVQEKKFTAQDE-----TYRSAKTVHSKWTRH-Q-A-FEAEIASNKDRLLR 1335
+ G+ EK F +E T+RS K + S T+ Q A E A
Sbjct: 1694 ETIVD--GKLKTEKIFKEINEHSTSYTFRSEKGLLSA-TQFTQPALTLMEKA-----AFE 1745
Query: 1336 VQQSGSELMKEK---PELAELIGPKISDLGQ-----------QFDDL------------E 1369
+K K P A G S LG+ + L
Sbjct: 1746 D-------LKSKGLIPADATFAGH--S-LGEYAALASLADVMSIESLVEVVFYRGMTMQV 1795
Query: 1370 TTTKDKGERLFDSNREVL------IHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQ 1423
+D+ R SN ++ + + + + +++ TG + VN ++
Sbjct: 1796 AVPRDELGR---SNYGMIAINPGRVAASFSQEA--LQYVVERVGKR-TGWLVEIVNYNVE 1849
Query: 1424 KQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLL 1479
QQ V A + L+T +L K+++I + + E+++ L
Sbjct: 1850 NQQY------VAAGDLRALDTVTNVLNFI---KLQKIDIIELQKSLSLEEVEGHLF 1896
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain,
signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1
PDB: 2otx_A
Length = 211
Score = 65.2 bits (158), Expect = 2e-11
Identities = 32/215 (14%), Positives = 69/215 (32%), Gaps = 15/215 (6%)
Query: 2053 DEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQTPP 2112
+E+ NL+ E F + E + +K++ K ++ Q++ A+
Sbjct: 4 EEIRNLLADVETFVADTLKGENLSKKAKEKRESLIKKIKDVKSVYLQEFQDKGDAEDGDE 63
Query: 2113 TSPDQSAKDRLDGEEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKHEWEAIAK 2172
+ + +K+ + + G L ++ +
Sbjct: 64 YDDPFAGPADTISLASERYDKDDDGPSDGNQFPPIAAQDLPFVIKAGYLEKRRK----DH 119
Query: 2173 RASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVA---DDYSK 2229
W K + +L T+ Y+Y K + E + G ++ K
Sbjct: 120 SFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFA--------IDGYDVRMNNTLRKDGK 171
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
K F + A + Y F A + ++ +WV L +
Sbjct: 172 KDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 206
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP:
b.55.1.1
Length = 113
Score = 62.0 bits (151), Expect = 2e-11
Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGS-AQVADDYSKK 2230
K + +W ++V L + FYK + I L+G + D+ K+
Sbjct: 14 KGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMI--------PLKGSTLTSPCQDFGKR 65
Query: 2231 KHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQAS 2270
VF++ ++ FQA EE + WV ++ +
Sbjct: 66 MFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIEG 105
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction;
1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Length = 123
Score = 61.7 bits (150), Expect = 3e-11
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 12/112 (10%)
Query: 2172 KRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV--ADDY 2227
K+ S+ R W + + L G L++YKD + + L + +
Sbjct: 19 KQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSV--------LLPSYNIRPDGPGAP 70
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQT 2279
++ F + Y+ A E++ W+ AL + RS
Sbjct: 71 RGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRAEGDDYGQPRSPA 122
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain,
PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 122
Score = 61.3 bits (149), Expect = 4e-11
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Query: 2172 KRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQV--ADDY 2227
K+AS+ + W+K + L L++YKD+K I L D
Sbjct: 30 KQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSI--------PLLSFRVAAVQPSDN 81
Query: 2228 SKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQ 2268
+KH F+ + Y F A++ EE W+ A+ Q
Sbjct: 82 ISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQ 122
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural
genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo
sapiens} SCOP: b.55.1.1
Length = 129
Score = 59.2 bits (143), Expect = 3e-10
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 2172 KRASNRSWDKIFVSLRG---TLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS 2228
+ ++W LR L Y+ ++ + + L +
Sbjct: 27 QGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGN 86
Query: 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASG 2271
+ ++F+V + Y QA + E +W+ A+ + +SG
Sbjct: 87 VQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSGPSSG 129
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin,
inositol tetrakisphosphate signal transduction protein,
adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP:
b.55.1.1 PDB: 1fb8_A
Length = 126
Score = 58.2 bits (141), Expect = 5e-10
Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 9/108 (8%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
+ ++W + +L L ++KDQ S + + L SA D ++
Sbjct: 27 QGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILD--------LTECSAVQFDYSQERV 78
Query: 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQT 2279
+ F + + AK E ++W+ L Q
Sbjct: 79 NCFCLVF-PFRTFYLCAKTGVEADEWIKILRWKLSQIRKQLNQGEGTI 125
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: b.55.1.1 PDB: 1xx0_A
Length = 129
Score = 57.5 bits (139), Expect = 1e-09
Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 2172 KRASNRSWDKIFVSLRGT--LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK 2229
+ ++W LR L++Y + I+ + + + S+
Sbjct: 27 QGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG---CVVTSVESNSNGRKSE 83
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPS 2274
++++F + + Y QA +E +W+ A+ SG S
Sbjct: 84 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTGKSGPSS 128
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 137
Score = 57.7 bits (139), Expect = 1e-09
Identities = 20/133 (15%), Positives = 53/133 (39%), Gaps = 19/133 (14%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
++ + + + + +V + T L +YK Q A P L+G + S +K
Sbjct: 21 RKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQ------QLNLKGCEVVPDVNVSGQK 74
Query: 2232 HVFR---VKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAAEMRKD 2288
+ + +E + +++++ +W+ + AS G +T+ + +
Sbjct: 75 FCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGC-----RLASKG-----RTMADSSYTSE 124
Query: 2289 EPKRRSFFTLKKS 2301
+F +L+++
Sbjct: 125 VQAILAFLSLQRT 137
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain,
zizimin1, structural genomics, riken structural
genomics/proteomics initiative; NMR {Homo sapiens} SCOP:
b.55.1.1
Length = 150
Score = 58.1 bits (140), Expect = 1e-09
Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 2171 AKRASNRSWDKIFVSLRGTL-----LYFYKDQKSAKSSPEIYYKNETPFELRG-----GS 2220
A + RS+ + F L L FYKD+K +K E +G
Sbjct: 32 AISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISK-------------EPKGSIFLDSC 78
Query: 2221 AQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTL 2280
V + ++ F +K + + YL A ++ EM +W+T L+ + + +
Sbjct: 79 MGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGD 138
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Length = 228
Score = 59.2 bits (143), Expect = 2e-09
Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 11/107 (10%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
S R+W K + LR + L ++++ K + +R A+ D + K+
Sbjct: 72 STLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVE--------VRS--AKEIIDNTNKE 121
Query: 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQ 2278
+ + + + A++ E+ ++W + LS V +
Sbjct: 122 NGIDIIMADRT-FHLIAESPEDASQWFSVLSQVHSSTDQEIREMHDE 167
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH
domains (ARAP) 2, PH domain, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.55.1.1
Length = 115
Score = 55.9 bits (135), Expect = 3e-09
Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 2176 NRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFR 2235
R + K +V G + +Y ++K S I L S + F
Sbjct: 22 KRMFQKRWVKFDGLSISYYNNEKEMYSKGII--------PLSAISTVRVQ----GDNKFE 69
Query: 2236 VKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPA 2282
V ++F+ + +EE N W++ L N + Q+ S S
Sbjct: 70 VVT-TQRTFVFRVEKEEERNDWISILLNALKSQSLTSQSQASGPSSG 115
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH
domain, phret1, structural genomics, NPPSFA; NMR {Mus
musculus}
Length = 130
Score = 54.6 bits (131), Expect = 1e-08
Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 2/97 (2%)
Query: 2183 FVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQ--VADDYSKKKHVFRVKADN 2240
F L +Y D+ + + G Q + + + V
Sbjct: 29 FALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLRE 88
Query: 2241 GAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRS 2277
G+ A+ ++ W TAL A G + S
Sbjct: 89 GSRLHLCAETRDDAIAWKTALMEANSTPAPAGATVPS 125
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling
protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB:
3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Length = 120
Score = 53.9 bits (129), Expect = 2e-08
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 17/118 (14%)
Query: 2158 EGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAK-SSPE--IYYKNETPF 2214
G L R+ ++ +S+ K + L L+ +K K P + T
Sbjct: 9 SGFLERRSKF--------LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVT 60
Query: 2215 ELRGGSAQVADDYSKKKHVFRVKADN------GAEYLFQAKNDEEMNKWVTALSNVCE 2266
E ++ + + + F + A G ++F+A + E M W L +
Sbjct: 61 EHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the
pleckstrin homology domain, structural genomics; NMR {Mus
musculus} SCOP: b.55.1.1
Length = 126
Score = 53.8 bits (129), Expect = 2e-08
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 3/126 (2%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSL--RGTLLYFYKDQKSAKSSPEI 2206
+SG+ R + I ++ + + + L + L +Y D +
Sbjct: 2 SSGSSGMPYVDRQNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAG 61
Query: 2207 YYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266
+ + S K F + A + Y QA + +++ WV AL+ +
Sbjct: 62 AVGSLQLTYISKVSIATPKQKPKTPFCFVINALS-QRYFLQANDQKDLKDWVEALNQASK 120
Query: 2267 QQASGG 2272
S G
Sbjct: 121 SGPSSG 126
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta
sheet, protein transport; HET: SEP EDO; 1.00A {Homo
sapiens} PDB: 3via_A 2dhi_A
Length = 112
Score = 53.4 bits (128), Expect = 2e-08
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Query: 2183 FVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQ--VADDYSKKKHVFRVKADN 2240
F L +Y DQ +++ + G + D K + ++ +
Sbjct: 26 FDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRD 85
Query: 2241 GAEYLFQAKNDEEMNKWVTALSNV 2264
G A++ ++ W L +
Sbjct: 86 GKTISLCAESTDDCLAWKFTLQDS 109
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 119
Score = 53.2 bits (128), Expect = 3e-08
Identities = 17/130 (13%), Positives = 34/130 (26%), Gaps = 23/130 (17%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYY 2208
+SG+ + G L + + R W + Y Y
Sbjct: 2 SSGSSGKKLCGYLSKF------GGKGPIRGWKSRWFFYDERKCQLY------------YS 43
Query: 2209 KNETPFELRG----GSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
+ SA ++ +F +K +A + M W+ L
Sbjct: 44 RTAQDANPLDSIDLSSAVFDCKADAEEGIFEIKT-PSRVITLKAATKQAMLYWLQQLQMK 102
Query: 2265 CEQQASGGPS 2274
+ + P+
Sbjct: 103 RWEFHNSPPA 112
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related
protein 11, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 120
Score = 53.0 bits (127), Expect = 4e-08
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 19/133 (14%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGT--LLYFYKDQKSAKSSPEI 2206
+SG+ +++ G L++ W F L LL ++ +++S P
Sbjct: 2 SSGSSGENVYGYLMKY--------TNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRG 53
Query: 2207 YYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE 2266
+L G +D+ H F V A +G +Y +A + +E WV+ L +
Sbjct: 54 T------LQLAGAVISPSDE---DSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQ 104
Query: 2267 QQASGGPSSRSQT 2279
+ S
Sbjct: 105 HHTEAIGKNNSGP 117
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid
binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP:
b.55.1.1 PDB: 2i5c_A* 1zm0_A
Length = 109
Score = 51.6 bits (124), Expect = 7e-08
Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Query: 2172 KRASNRSWDKIFVSLRG--TLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK 2229
+ ++W LR L++Y + I+ + + + S+
Sbjct: 16 QGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG---CVVTSVESNSNGRKSE 72
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
++++F + + Y QA +E +W+ A+
Sbjct: 73 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1
GTPase-activating protein...; PH domain, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 114
Score = 50.6 bits (121), Expect = 2e-07
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 2172 KRASN--RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSK 2229
K++ + W + S++ +L + + L + QV + ++
Sbjct: 18 KKSDGIRKVWQRRKCSVKNGILTISHATSNRQP---------AKLNLL--TCQVKPN-AE 65
Query: 2230 KKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCE---QQASGGPSS 2275
K F + + + Y FQA+++++ W++ L+N E A GPSS
Sbjct: 66 DKKSFDLIS-HNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAFSGPSS 113
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain,
structural genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Length = 117
Score = 50.5 bits (121), Expect = 3e-07
Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 16/128 (12%)
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKR-ASNRSWDK---IFVSLRGTLLYFYKDQKSAKSSP 2204
+SG+ EG L K+ A + W + + L Y Y + +
Sbjct: 2 SSGSSGRSYEGILY---------KKGAFMKPWKARWFVLDKTKHQLRY-YDHRMDTECKG 51
Query: 2205 EIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
I G A +K F VK Y F A++ +WV + +
Sbjct: 52 VIDLAEVEAVAP-GTPTIGAPKTVDEKAFFDVKT-TRRVYNFCAQDVPSAQQWVDRIQSC 109
Query: 2265 CEQQASGG 2272
S G
Sbjct: 110 LSSGPSSG 117
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain,
lipid-binding, membrane, membrane protein; 1.90A {Homo
sapiens} PDB: 2kcj_A
Length = 103
Score = 46.3 bits (110), Expect = 4e-06
Identities = 17/120 (14%), Positives = 32/120 (26%), Gaps = 17/120 (14%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
MEG L + + W + L +L +Y Q + ++
Sbjct: 1 MEGVLYKWTNY--------LTGWQPRWFVLDNGILSYYDSQDDVCKGSKGS------IKM 46
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSR 2276
+V + + +A N E +W+ AL + R
Sbjct: 47 AVCEIKVHSA---DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASLTDTRLVPR 103
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics
consortium, GTPase activation, SGC, binding, nucleus,
phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB:
3feh_A* 3fm8_C 3mdb_C*
Length = 386
Score = 50.1 bits (119), Expect = 5e-06
Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 2173 RASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETP-FELRGGSAQVADDYSKKK 2231
+ K + ++ L ++KD A + E++ ++ + + G
Sbjct: 280 PKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQG-HHWP 338
Query: 2232 HVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
H + + +LF + + + +WV A ++
Sbjct: 339 HGITIVTPDRK-FLFACETESDQREWVAAFQKAVDR 373
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative, transferase; NMR {Homo sapiens}
Length = 164
Score = 47.4 bits (112), Expect = 7e-06
Identities = 17/118 (14%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
+E L+++ + K+ S ++ + L ++L +Y+ + K + + +
Sbjct: 17 LEEILIKRSQ---QKKKTSPLNYKERLFVLTKSMLTYYEGRAE-KKYRKGFIDVSKIKCV 72
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPS 2274
+ K+ F+V D Y+ A + + + WV L + +
Sbjct: 73 EIVKNDDGVIPCQNKYPFQVVHDANTLYI-FAPSPQSRDLWVKKLKEEIKNNNNIMIK 129
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport,
pleckstrin homology domain, phosphatidylinositol binding,
structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Length = 130
Score = 46.3 bits (109), Expect = 9e-06
Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIY-----------YKNETPFELRGGS 2220
R + +SW K++ L+ +L YK QK+ + + K+ F+L
Sbjct: 16 IRGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPL 75
Query: 2221 AQVADDY--SKKKHVFRVKADNGAEY-LFQAKNDEEMNKWVTALSNVCEQQASGG 2272
Q K + V + + Y + +A ++ + W+ AL + S G
Sbjct: 76 EQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSGPSSG 130
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain,
PIP2 binding site, structural genomics; NMR {Homo
sapiens} SCOP: b.55.1.1
Length = 126
Score = 46.1 bits (109), Expect = 9e-06
Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 6/111 (5%)
Query: 2172 KRASN--RSWDK-IFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS 2228
N + W K FV ++ + F K + + +
Sbjct: 16 AIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVD--YTDPQPGLE 73
Query: 2229 KKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQT 2279
+ F G +F + ++++ WV A+ Q P ++S
Sbjct: 74 GGRAFFNAVK-EGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPTQSGP 123
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology
domain, PKB, AKT, phosphoinositide,
serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo
sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A*
2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Length = 125
Score = 46.1 bits (109), Expect = 1e-05
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 9/100 (9%)
Query: 2172 KRASNRSWDKIFVSLR-GTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKK 2230
+ ++W + L+ YK++ E N F + Q+ +
Sbjct: 17 RGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNN---FSVAQ--CQLMKTERPR 71
Query: 2231 KHVFRVKADNG---AEYLFQAKNDEEMNKWVTALSNVCEQ 2267
+ F ++ E F + EE +W TA+ V +
Sbjct: 72 PNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG 111
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Length = 112
Score = 45.0 bits (106), Expect = 2e-05
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 18/109 (16%)
Query: 2172 KRASNRSWDKIFVSLRGT---LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVAD--D 2226
S +W +++ ++ + +L+ + + I L V D +
Sbjct: 16 LSESGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIP--------LPSCKLSVPDPEE 67
Query: 2227 YSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSS 2275
HV++++ + A + E +W+ LS A GPSS
Sbjct: 68 RLDSGHVWKLQW-AKQSWYLSASSAELQQQWLETLSTA----AHSGPSS 111
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid
transport; NMR {Homo sapiens}
Length = 94
Score = 44.3 bits (105), Expect = 2e-05
Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 18/105 (17%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
G L + W +V L+ L +YK + + L
Sbjct: 3 RCGVLSKWTN--------YIHGWQDRWVVLKNNALSYYKSEDETEYGCRGS------ICL 48
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
A + + F + N + + +A++ + +W+ A+
Sbjct: 49 SK--AVITPH-DFDECRFDISV-NDSVWYLRAQDPDHRQQWIDAI 89
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin
activation, cytoplas membrane, cell adhesion; HET: SRT;
1.90A {Homo sapiens} PDB: 2lko_A*
Length = 173
Score = 45.9 bits (108), Expect = 3e-05
Identities = 21/131 (16%), Positives = 51/131 (38%), Gaps = 19/131 (14%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
K+ + + + + + + + T + YK ++ + +P LRG + S +K
Sbjct: 59 KKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQ------MNLRGCEVTPDVNISGQK 112
Query: 2232 HVFRVK---ADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAAEMRKD 2288
++ A+ E + N+++ W+ A + AS G +T+ + +
Sbjct: 113 FNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAAC-----RLASKG-----KTMADSSYNLE 162
Query: 2289 EPKRRSFFTLK 2299
SF ++
Sbjct: 163 VQNILSFLKMQ 173
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc
binding, X-linked agammaglobulinemia, tyrosine-protein
kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A*
2z0p_A* 1bwn_A*
Length = 169
Score = 44.2 bits (103), Expect = 1e-04
Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 26/131 (19%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAK--------------- 2201
+E +++ + K+ S ++ K L L +Y+
Sbjct: 5 LESIFLKRSQ---QKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKIT 61
Query: 2202 -------SSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254
+ + + + F+V D G Y+ + +E
Sbjct: 62 CVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYV-FSPTEELR 120
Query: 2255 NKWVTALSNVC 2265
+W+ L NV
Sbjct: 121 KRWIHQLKNVI 131
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus}
SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A*
1u27_A*
Length = 127
Score = 43.1 bits (101), Expect = 1e-04
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 30/118 (25%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
++W + + L LY+++ + I L S + D +K
Sbjct: 14 LGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIP--------LENLSIREVLD-PRKP 64
Query: 2232 HVFRVKADNGAE---------------------YLFQAKNDEEMNKWVTALSNVCEQQ 2268
+ F + + Y A + EE +W+ ++ +
Sbjct: 65 NCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain,
BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB:
2z0o_A 2elb_A
Length = 385
Score = 44.6 bits (104), Expect = 3e-04
Identities = 15/94 (15%), Positives = 40/94 (42%), Gaps = 11/94 (11%)
Query: 2175 SNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVF 2234
+ +WD+ F +G L A ++ S D +++ F
Sbjct: 293 VSSTWDRQFYFTQGGNLMSQARGDVAGG---------LAMDIDNCSVMAVDC-EDRRYCF 342
Query: 2235 RVKADNGAE-YLFQAKNDEEMNKWVTALSNVCEQ 2267
++ + +G + + QA++ ++ +W+ ++N+ +Q
Sbjct: 343 QITSFDGKKSSILQAESKKDHEEWICTINNISKQ 376
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment
2, heavy meromyosin, essential light chain, motor
protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1
PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 44.8 bits (106), Expect = 3e-04
Identities = 44/296 (14%), Positives = 107/296 (36%), Gaps = 33/296 (11%)
Query: 1426 QMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRAL 1485
+ +E + ++ + L+ + + + + E V + ++ E + E + AR
Sbjct: 881 KELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHE-MEARIEEE 939
Query: 1486 EKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRI 1545
E++ + Q + +++ E+ + + Q L E + +I
Sbjct: 940 EERSQQLQAEKKKMQQQMLDLEE--------------QLEEEEAARQKLQLEKVTADGKI 985
Query: 1546 NLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDAS 1605
I + + + T + L +R L + E K K +
Sbjct: 986 K----KMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKN------ 1035
Query: 1606 EAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQLTSEM 1665
+ ES +SE E K+E S Q L K LE D + I +L +L +++
Sbjct: 1036 KHESMISELE-----VRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQL 1090
Query: 1666 HPESDQIALKQSQVDKLYAGLKDLAGERRAKLDEALKLFMLNREVDDLEQWIAERE 1721
+ +++ ++++ + + + R +L+ + L +++ + + E
Sbjct: 1091 AKKEEELQAALARLEDETSQKNNALKKIR-ELESHIS--DLQEDLESEKAARNKAE 1143
Score = 44.8 bits (106), Expect = 4e-04
Identities = 55/316 (17%), Positives = 124/316 (39%), Gaps = 33/316 (10%)
Query: 382 KEGKMISDINKAWERLEKAEHERELALREEL-IRQEKLEQLAARFNRKASMRETWLSENQ 440
K + ++ + +L + ++ + L+ E + E E +K + E
Sbjct: 875 KAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEA 934
Query: 441 RLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINAR 500
R+ ++ ++A KK ++ + EE+++ Q+L+ EK +I
Sbjct: 935 RIEEEEE---RSQQLQAEKKK---MQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKM 988
Query: 501 KENVLRLWNYLLELLKARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMG 560
++++L + + +L K R++ E L + E EE K + L+ KH
Sbjct: 989 EDDILIMEDQNNKLTKERKLLEERVSDLTTNLAE--------EEEKAKNLTKLKNKHESM 1040
Query: 561 VEDLLQKHSLVEADINVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAY 620
+ +L + E L E++K ++ L E+ E + ++ +L+
Sbjct: 1041 ISELEVRLKKEEKSRQEL-EKIKRKLEGESSDLHEQIAE---------LQAQIAELKAQL 1090
Query: 621 SELVKLAVERRARLEESRKLWQLYWDMADEENWIKEKEQIVS--TGDIGHDLTTINLLLS 678
++ + ARLE+ + I+E E +S D+ + N
Sbjct: 1091 AKKEEELQAALARLEDETSQ------KNNALKKIRELESHISDLQEDLESEKAARNKAEK 1144
Query: 679 KHKALEDEIQAHESQL 694
+ + L +E++A +++L
Sbjct: 1145 QKRDLSEELEALKTEL 1160
Score = 40.2 bits (94), Expect = 0.010
Identities = 48/275 (17%), Positives = 103/275 (37%), Gaps = 19/275 (6%)
Query: 971 IEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEA 1030
E ++ + + +E + LQ M++ + ++ +L+ EA ++ E
Sbjct: 923 QELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTAD 982
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
I++ I I+ +Q ++ KER E DL L + + LTK + S
Sbjct: 983 GKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESM-- 1040
Query: 1091 PSSLADAEKLLNQHQAIREEIDNYTEDY-KKMMDYGEKVTAEPSTHDDPQYMFLRERLKA 1149
+++ E L + + R+E++ + D E++ + + L+ +L
Sbjct: 1041 ---ISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAE-----LKAQLAK 1092
Query: 1150 LRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNL--EQV 1207
EEL +L ++ + ++ E +S + L ++ N +Q
Sbjct: 1093 KE---EELQAA---LARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQK 1146
Query: 1208 ENLIKRHEAFLTTMEANDDKINGVVQFADRLNDED 1242
+L + EA T +E D + +D
Sbjct: 1147 RDLSEELEALKTELEDTLDTTATQQELRGSDYKDD 1181
Score = 37.5 bits (87), Expect = 0.065
Identities = 46/352 (13%), Positives = 115/352 (32%), Gaps = 45/352 (12%)
Query: 516 KARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADI 575
+ + + E + ++ Q+ L +E+ +L + +++ LQ + + A+
Sbjct: 857 EEMQAKDEELQRTKERQQKAEAELKELEQKHTQLC-----EEKNLLQEKLQAETELYAEA 911
Query: 576 NVLGERVKSVVQQSQRFLDEETNEGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLE 635
+ R+ + Q+ + L E R+++ E+ +L + + ++
Sbjct: 912 EEMRVRLAAKKQELEEILHEME-------------ARIEEEEERSQQLQAEKKKMQQQML 958
Query: 636 ESRKLWQLY-WDMADEENWIKEKEQIVS--TGDIGHDLTTINLLLSKHKALEDEIQAHES 692
+ + + + + + DI N L + K LE+ +
Sbjct: 959 DLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVS---- 1014
Query: 693 QLMSVIAVGDELVNQQHFGADRIRGRLQDTMAMWQNL----LDLAAFRRKRLEEAVDFHQ 748
L + +A +E ++ + + + +L +RK E+ D H+
Sbjct: 1015 DLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHE 1074
Query: 749 FFADAVDVDIWMLDTVRLVSSE------DVGRDEANVQSLLKKHK-------DVTEELKN 795
A+ + + E + + + + LKK + D+ E+L++
Sbjct: 1075 QIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLES 1134
Query: 796 YASTIEALRNQASQLGDQDKESPEVLERLASIEFRYKELLELAKLRKQRLLD 847
+ Q L ++ + LE EL + D
Sbjct: 1135 EKAARNKAEKQKRDLSEELEALKTELEDTLDTT---ATQQELRGSDYKDDDD 1183
Score = 30.6 bits (69), Expect = 7.4
Identities = 41/324 (12%), Positives = 104/324 (32%), Gaps = 39/324 (12%)
Query: 1823 RISEKHHAMSDELGRDAGSVNTLQRKHQNFLQDLQTLQSQVQQICNESAKLQASYAGEKA 1882
E+ + + + L++KH ++ LQ ++Q + + A E
Sbjct: 861 AKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQ-----AETELYAEAEEMR 915
Query: 1883 KEITNREAEVVNAWASLQNACDARKQKLGDTGDLFKFLIM-VRTLMLWMDDVVRQMNTSE 1941
+ ++ E+ ++ + +++ K + + L +++ +
Sbjct: 916 VRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQ 975
Query: 1942 KARDVSGVELLMNNHQSLKAEIDTREDNFTACISLGKELLSRNHYASNEIKEKLVGLSNQ 2001
+ + ++ +I ED K L R + + E+ +
Sbjct: 976 LEKVT-----ADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEE-KAKN 1029
Query: 2002 RNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKK 2061
L ++ E L++ L+ + +R +E E +L ++
Sbjct: 1030 LTKLKNKHESMISELEVRLKKEEKSRQELEKI---------KRKLE-----GESSDLHEQ 1075
Query: 2062 HEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQTPPTSPDQSAKD 2121
+ + + + E EL+ R E+E ++ L + +
Sbjct: 1076 IAELQAQIAELKAQLAKKE----EELQAALARLEDETSQKNNALKKI--------RELES 1123
Query: 2122 RLDG-EEVKDKEKEGESRQEKQAR 2144
+ +E + EK ++ EKQ R
Sbjct: 1124 HISDLQEDLESEKAARNKAEKQKR 1147
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo
sapiens}
Length = 129
Score = 41.6 bits (97), Expect = 4e-04
Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 414 RQEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYE 473
+ E ++QL + ++A+ W+ + + +E H+ ++ + +
Sbjct: 6 QLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDAD 65
Query: 474 ERVQAVVTVSQELEAEKYHDIDRINARK-------ENVLRLWNYLLELLKARRMRLESSL 526
+A++ + +E + + +++ + + W + +L+ R L
Sbjct: 66 REREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQ 125
Query: 527 QLQQ 530
QQ
Sbjct: 126 SKQQ 129
Score = 39.3 bits (91), Expect = 0.003
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 2024 QFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLT 2083
++A+ AA W+ + L M + TI+E+E LI H+ F+ + + A+ +
Sbjct: 16 EYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIH 75
Query: 2084 TFELKELNK 2092
E + + +
Sbjct: 76 K-EAQRIAE 83
Score = 35.4 bits (81), Expect = 0.047
Identities = 16/125 (12%), Positives = 46/125 (36%), Gaps = 8/125 (6%)
Query: 1057 KLEEAGDLH-RFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYT 1115
+LE LH + + F W+ D+ ++ + E L++ H + + +
Sbjct: 6 QLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDAD 65
Query: 1116 EDYKKMMDYGEKVTAEPSTHDDPQ-----YMFLRERLKALRDGWEELHKMWENRQQLLSQ 1170
+ + ++ ++ ++ Y + + + WE++ ++ R L +
Sbjct: 66 REREAILAIHKEAQRIAESNHIKLSGSNPYTTV--TPQIINSKWEKVQQLVPKRDHALLE 123
Query: 1171 SLNLQ 1175
+ Q
Sbjct: 124 EQSKQ 128
Score = 32.3 bits (73), Expect = 0.69
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 361 EVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQE 416
E + ++ + PYT IN WE++++ +R+ AL EE +Q+
Sbjct: 77 EAQRIAESNHIKLSGSNPYTTVT---PQIINSKWEKVQQLVPKRDHALLEEQSKQQ 129
Score = 31.2 bits (70), Expect = 1.3
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
Query: 651 ENWIKEKEQIVSTGDIGHDLTTINLLLSKHKALEDEIQAHESQLMSVIAVGDELVNQQHF 710
NW++ + + I H + I L+S H + + + + +++A+ E
Sbjct: 25 NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES 84
Query: 711 GADRIRGR-------LQDTMAMWQNLLDLAAFRRKRLEE 742
++ G Q + W+ + L R L E
Sbjct: 85 NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLE 123
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Length = 134
Score = 41.6 bits (97), Expect = 5e-04
Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 21/113 (18%)
Query: 2172 KRASN-RSWDKIFVSLRGTLLYFYKDQ-------------------KSAKSSPEIYYKNE 2211
+ S +W + + L G + ++ + + + +
Sbjct: 15 EDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARR 74
Query: 2212 TPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNV 2264
FEL Q DD R + A EE + W+ L+ V
Sbjct: 75 NTFELITVRPQREDDRETLVSQCRDTL-CVTKNWLSADTKEERDLWMQKLNQV 126
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat,
cytoplasm, GTP-binding, GTPase activation, metal-binding,
nucleotide-binding; NMR {Homo sapiens}
Length = 128
Score = 41.0 bits (95), Expect = 6e-04
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 21/123 (17%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLR--GTLLYFYKDQKSAKSSP--EIYYKNET 2212
+ L+++ + + N+ W K +V+L G LLY S+ E+ T
Sbjct: 6 KQSFLLKR------SGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTT 59
Query: 2213 -----------PFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTAL 2261
++ A ++ F + + G + F+A + EE + WV A+
Sbjct: 60 VKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAI 119
Query: 2262 SNV 2264
+
Sbjct: 120 ESQ 122
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal
transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2
b.55.1.2 PDB: 1irs_A*
Length = 264
Score = 42.9 bits (100), Expect = 7e-04
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 19/118 (16%)
Query: 2177 RSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQ-----------VAD 2225
+S K F LR + YY+NE + + + +
Sbjct: 20 KSMHKRFFVLRAASEAGGPARLE-------YYENEKKWRHKSSAPKRSIPLESCFNINKR 72
Query: 2226 DYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAA 2283
SK KH+ + + + A ++ E + W AL + + + +
Sbjct: 73 ADSKNKHLVALYTRDE-HFAIAADSEAEQDSWYQALLQLHNRAKGHHDGAAALGAGGG 129
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin
homology domain, structural genomics; NMR {Mus musculus}
SCOP: b.55.1.1
Length = 132
Score = 40.7 bits (95), Expect = 7e-04
Identities = 12/111 (10%), Positives = 34/111 (30%), Gaps = 6/111 (5%)
Query: 2162 VRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSA 2221
V + A ++ F+ L+ + + + + + G
Sbjct: 28 VIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSG------FMYQGKIPIAGMVV 81
Query: 2222 QVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQQASGG 2272
D+ +F + + N+++ +W+ L+ + + S G
Sbjct: 82 NRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPSSG 132
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH,
RAS-associating, pleckstrin-homology, adapter
phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Length = 256
Score = 42.5 bits (99), Expect = 0.001
Identities = 33/218 (15%), Positives = 67/218 (30%), Gaps = 24/218 (11%)
Query: 2053 DEVENLIKKHEAFEKSAIAQEERFSALERLTTFE----LKELNKRKEEEERKRQEELAAK 2108
D + L+ K + + ++ E L E + ++ E + + AK
Sbjct: 33 DLCQLLVYKSHSVDDNSWTLVEHHPHLGLERCLEDHELVVQVESTMASESKFLFRKNYAK 92
Query: 2109 QTPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKHEWE 2168
+P +++ + + + Q P ++G L K
Sbjct: 93 YEFFKNPMNFFPEQMVTWSQQSNGSQTQLLQNFLNSSSSPE-------IQGFLHVKEL-- 143
Query: 2169 AIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYS 2228
+SW K++V LR + LY SA + + A +
Sbjct: 144 ------GKKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNA 197
Query: 2229 KKKHVFRVKADNGAE-----YLFQAKNDEEMNKWVTAL 2261
H +K + L A++++ W+TA
Sbjct: 198 PTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAF 235
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 42.4 bits (100), Expect = 0.002
Identities = 23/130 (17%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 991 IMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQM 1050
IM LQR++ ++ ++ K+++LE ++ + E +R ++ + ++
Sbjct: 930 IMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLS- 988
Query: 1051 LKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREE 1110
L+E AKL + +LH+ + + W K + + +++ ++ + +EE
Sbjct: 989 LQEEIAKLRK--ELHQTQTEKKTIEEWADKYKHETEQL-----VSELKEQNTLLKTEKEE 1041
Query: 1111 IDNYTEDYKK 1120
++ D K
Sbjct: 1042 LNRRIHDQAK 1051
Score = 38.6 bits (90), Expect = 0.031
Identities = 49/302 (16%), Positives = 104/302 (34%), Gaps = 40/302 (13%)
Query: 366 TLQSKMRANNQKPYTP--KEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAA 423
T+Q +R + + Y + + I K + + + + Q L
Sbjct: 796 TIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIAL-QALLRGYLV 854
Query: 424 RFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAIETDIFAYEERVQAVVTVS 483
R + +RE ++ ++ Q KH Y ++A+V +
Sbjct: 855 RNKYQMMLRE-----HKSIIIQ---------------KHVRGWLARVHYHRTLKAIVYLQ 894
Query: 484 QELEAEKYHDIDRINARKE-NVLRLWNYLLELLKARRMRLESSL-QLQQSFQEMLYILDS 541
R+ A++E L++ +E K + LE+ + QLQ+ E S
Sbjct: 895 CCYR--------RMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKS 946
Query: 542 MEELKMRLLSDDYGKHLMGVEDLLQKHSLVEADINVLGERVKSV---VQQSQRFLDEETN 598
+ E KM L Y + +++ + E + RV S+ + + ++ L +
Sbjct: 947 LLE-KMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT 1005
Query: 599 EGFRPCDPAIIVERVQQLEDAYSELVKLAVERRARLEE-SRKLWQLYWDMADEENWIKEK 657
E + + + E SEL + + EE +R++ ++ + +
Sbjct: 1006 E--KKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVE 1063
Query: 658 EQ 659
E
Sbjct: 1064 ET 1065
Score = 38.6 bits (90), Expect = 0.033
Identities = 38/248 (15%), Positives = 83/248 (33%), Gaps = 28/248 (11%)
Query: 1265 ERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEA 1324
R + + L+ H+ + + + W+ + T ++ + + R A
Sbjct: 849 LRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHY---HRTLKAIVYLQCCYRRMMAKRE 905
Query: 1325 EIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFDSNR 1384
+L +S K L KI L ++ D+ K E++ +N
Sbjct: 906 L-----KKLKIEARSVERYKKLHIGLEN----KIMQLQRKIDEQNKEYKSLLEKM--NNL 954
Query: 1385 EVLIHQTCDDIDSWMNELEKQI-ENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSE-- 1441
E+ + + S + L E ++ + + S+ + K + Q + K + E
Sbjct: 955 EITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWA 1014
Query: 1442 ------LETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFR 1495
E L++ E + + ++I E + + K+ E
Sbjct: 1015 DKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLEL---- 1070
Query: 1496 RDIEDEKL 1503
D+ DE+L
Sbjct: 1071 -DLNDERL 1077
Score = 37.4 bits (87), Expect = 0.068
Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 1/201 (0%)
Query: 1399 MNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKME 1458
N+ + + + V + + T A+ Q A+ K + +
Sbjct: 855 RNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEAR 914
Query: 1459 EIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYG 1518
+ K KI + ++ K + ++E EKL S
Sbjct: 915 SVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVE-RLR 973
Query: 1519 NSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQ 1578
S + SL +EI ++ + + + + E L+ +L ++
Sbjct: 974 MSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNT 1033
Query: 1579 QLKKAVDERRSKLIQSEKAQQ 1599
LK +E ++ K
Sbjct: 1034 LLKTEKEELNRRIHDQAKEIT 1054
Score = 37.0 bits (86), Expect = 0.088
Identities = 26/208 (12%), Positives = 69/208 (33%), Gaps = 30/208 (14%)
Query: 366 TLQSKMRANNQKPYTPKEGKMISDINKAWERLE--------KAEHERELALREELIR--- 414
+Q +R + + + K I + + R+ K E ++ I
Sbjct: 869 IIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLEN 928
Query: 415 ---------QEKLEQLAARFNRKASMRETWLSENQRLVSQDNFGFDLGAVEAAAKKHEAI 465
E+ ++ + + ++ T+ +E ++L S D+ + + ++ +
Sbjct: 929 KIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRS------DVERLRMSEEEAKNA 982
Query: 466 ETDIFAYEERVQAVVTVSQELEAEKYH---DIDRINARKENVLRLWNYLLELLKARRMRL 522
+ + +E + + + + EK D+ E ++ LLK + L
Sbjct: 983 TNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEEL 1042
Query: 523 ESSL-QLQQSFQEMLYILDSMEELKMRL 549
+ + E + E ++ L
Sbjct: 1043 NRRIHDQAKEITETMEKKLVEETKQLEL 1070
Score = 33.9 bits (78), Expect = 0.77
Identities = 21/165 (12%), Positives = 61/165 (36%), Gaps = 7/165 (4%)
Query: 1978 KELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLI 2037
+ + R Y +++ + L L R + + + + Q +A
Sbjct: 827 RMYVVRKRY--QCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYH 884
Query: 2038 AQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEE 2097
++ ++ + +KK + +S ++ LE ++ +L ++ +E+
Sbjct: 885 RTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLEN----KIMQLQRKIDEQ 940
Query: 2098 ERKRQEELAAKQTPPTSP-DQSAKDRLDGEEVKDKEKEGESRQEK 2141
++ + L + ++ K R D E ++ E+E ++ +
Sbjct: 941 NKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNR 985
Score = 33.2 bits (76), Expect = 1.4
Identities = 24/201 (11%), Positives = 71/201 (35%), Gaps = 29/201 (14%)
Query: 995 QRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKER 1054
++L R + + LE + + ++++ E+ + + ++++ L
Sbjct: 906 LKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN----NLEITYSTE 961
Query: 1055 DAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNY 1114
KL + R +++ + A+ S + KL + + E
Sbjct: 962 TEKLRSDVERLR-----------MSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTI 1010
Query: 1115 TEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNL 1174
E K E++ +E L+E+ L+ EEL++ ++ + +++++
Sbjct: 1011 EEWADKYKHETEQLVSE-----------LKEQNTLLKTEKEELNRRIHDQAKEITETMEK 1059
Query: 1175 QMFNRDAK---QAEVLLSQQE 1192
++ + + +
Sbjct: 1060 KLVEETKQLELDLNDERLRYQ 1080
Score = 32.8 bits (75), Expect = 1.9
Identities = 17/176 (9%), Positives = 64/176 (36%), Gaps = 10/176 (5%)
Query: 1975 SLGKELLSRNHYASNEIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEA 2034
+ ++++ +I+ + V + + L E + LQ ++ + + +
Sbjct: 895 CCYRRMMAKRELKKLKIEARSVERYKKLHIGL---ENKIMQLQRKIDEQNKEYKSLLEKM 951
Query: 2035 WLIAQEPYLMSMELGLTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFE------LK 2088
+ + +L ++ + ++ + ++ +E + L + ++
Sbjct: 952 NNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIE 1011
Query: 2089 ELNKRKEEEERKRQEELAAKQTPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQAR 2144
E + + E + EL + T + + R+ ++ K+ + E + ++ +
Sbjct: 1012 EWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIH-DQAKEITETMEKKLVEETK 1066
Score = 32.4 bits (74), Expect = 2.5
Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 12/153 (7%)
Query: 1990 EIKEKLVGLSNQRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELG 2049
E ++ L + N L + E L+ +E + + + A + E+
Sbjct: 939 EQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNAT----NRVLSLQEEIA 994
Query: 2050 LTIDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQ 2109
E+ + + E+ A + L + L KEE R+ ++
Sbjct: 995 KLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054
Query: 2110 TPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQ 2142
++ + +L EE K E + + +
Sbjct: 1055 -------ETMEKKLV-EETKQLELDLNDERLRY 1079
Score = 32.4 bits (74), Expect = 2.6
Identities = 29/246 (11%), Positives = 74/246 (30%), Gaps = 11/246 (4%)
Query: 1144 RERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEV--LLSQQEHVLSKDETP 1201
R+R + +RD L + + L+ Q V L++ + +
Sbjct: 832 RKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIV 891
Query: 1202 VNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRN 1261
++ + E +EA +R +K+ + I+++
Sbjct: 892 YLQCCYRRMMAKRELKKLKIEARS---------VERYKKLHIGLENKIMQLQRKIDEQNK 942
Query: 1262 ANKERAHQQMETLKDQLQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQA 1321
K + + L+ E +E+ A + + +
Sbjct: 943 EYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQ 1002
Query: 1322 FEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFD 1381
+ E + ++ + + +L+ E E L+ + +L ++ D + E+
Sbjct: 1003 TQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLV 1062
Query: 1382 SNREVL 1387
+ L
Sbjct: 1063 EETKQL 1068
Score = 31.2 bits (71), Expect = 4.7
Identities = 24/199 (12%), Positives = 68/199 (34%), Gaps = 11/199 (5%)
Query: 1250 KKKADNINDRRNANKERAHQQMETLKDQLQLHQFLQDC-EELGEWVQEKKFTAQDETYRS 1308
+ + + + A ++++ LK + + + + L + + + ++
Sbjct: 885 RTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEY 944
Query: 1309 AKTVHSKWTRHQAFEAEIASNKDRLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDL 1368
+ + E + + R++ S E + L +I+ L ++
Sbjct: 945 KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQE-EIAKLRKELHQT 1003
Query: 1369 ETTTKDKGERLFDSNREVLIHQTCDDIDSWMNELEKQIENEDTGSDLASVNILMQKQQMI 1428
+T K E + + + ++EL++Q T + + I Q +++
Sbjct: 1004 QTEKKTIEEWA---------DKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEIT 1054
Query: 1429 ETQMAVKAKQVSELETQAE 1447
ET ++ +LE
Sbjct: 1055 ETMEKKLVEETKQLELDLN 1073
Score = 31.2 bits (71), Expect = 5.1
Identities = 31/262 (11%), Positives = 83/262 (31%), Gaps = 29/262 (11%)
Query: 1422 MQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLAR 1481
Q + V+ K L I+ + V+ + + + ++
Sbjct: 842 TIALQALLRGYLVRNKYQMMLREHKSII--------IQKHVRGWLARVHYHRTLKAIVYL 893
Query: 1482 QRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNH 1541
Q + + ++ + + K L+ K L ++ID
Sbjct: 894 QCCYRRMMAKRELKKLKIEARSVERYKKLHIG-------------LENKIMQLQRKIDEQ 940
Query: 1542 EPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYL 1601
+ L ++ + S +E L ++ K A + S + K ++ L
Sbjct: 941 NKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKEL 1000
Query: 1602 FDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELAVEDYADTIRQLGETARQL 1661
+ + E + + + E L +++ L+ E + R++ + A+++
Sbjct: 1001 HQTQTEKKTIEEW----ADKYKHETEQLVSELKEQNTLLKTEKE---ELNRRIHDQAKEI 1053
Query: 1662 TSEMHPE-SDQIALKQSQVDKL 1682
T M + ++ + ++
Sbjct: 1054 TETMEKKLVEETKQLELDLNDE 1075
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle,
cytokine; 2.22A {Schizosaccharomyces pombe} SCOP:
a.40.1.1
Length = 203
Score = 40.0 bits (93), Expect = 0.003
Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
Query: 32 NSSSRLFERSRIKALADE-RESVQKKTF-------QKWVNSHLVRVSCRIGDLYVDLRDG 83
+ + + + LA + RE++Q + +KW+ L LR+G
Sbjct: 26 QAGAPVGTKGSNTRLAAKQRETLQAYDYLCRVDEAKKWIEECLGTDLGPTSTFEQSLRNG 85
Query: 84 KMLLKLLEVLSGERLPR-PTKGKMRIHCLENVDKALQFLREQRVHLENM-GSHDIVDG 139
+L L++ ++L + +++ +N++K L F+ + DI +G
Sbjct: 86 VVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKFLDFIHGIGLPEIFHFELTDIYEG 143
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm,
membrane, metal-binding, nucleotide-binding,
phorbol-ester binding; NMR {Rattus norvegicus}
Length = 117
Score = 38.5 bits (89), Expect = 0.004
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 12/94 (12%)
Query: 2179 WDKIFVSLRGTLLYFY-KDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKH----V 2233
W K +V + + FY +Q +S+P + + F +R D Y +
Sbjct: 20 WVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVR--PVTQTDVYRADAKEIPRI 77
Query: 2234 FRVKADN-----GAEYLFQAKNDEEMNKWVTALS 2262
F++ N L A + EE KWV+ L
Sbjct: 78 FQILYANEGISSAKNLLLLANSTEEQQKWVSRLV 111
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP:
b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Length = 125
Score = 38.1 bits (88), Expect = 0.006
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 18/97 (18%)
Query: 2172 KRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKK 2231
K S W FV L L +YKD + + + N +LR V + K
Sbjct: 27 KGGSKEYW---FV-LTAENLSWYKDDEEKEKKYMLSVDN---LKLR----DVEKGFMSSK 75
Query: 2232 HVF-------RVKADNGAEYLFQAKNDEEMNKWVTAL 2261
H+F R + + + EE++ W +
Sbjct: 76 HIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASF 112
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle,
protein binding; 2.21A {Schizosaccharomyces pombe} SCOP:
a.40.1.1
Length = 159
Score = 38.3 bits (89), Expect = 0.008
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 59 QKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPR-PTKGKMRIHCLENVDKA 117
+KW+ L LR+G +L L++ ++L + +++ +N++K
Sbjct: 17 KKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNINKF 76
Query: 118 LQFLREQRVHLENM-GSHDIVDG 139
L F+ + DI +G
Sbjct: 77 LDFIHGIGLPEIFHFELTDIYEG 99
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor,
microtubles, motor protein; HET: ADP SPM; 2.81A
{Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C*
Length = 3245
Score = 39.5 bits (92), Expect = 0.019
Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 25/205 (12%)
Query: 1403 EKQIENEDTGSDLASVNILMQKQQMIETQMAVKA--KQVSELETQAEILQKTVPDKMEEI 1460
EK+ + E+ L NI ++K + +T+ VK +++ + ++ + K++++
Sbjct: 1910 EKRDQLEEEQLHL---NIGLKK--LRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM 1964
Query: 1461 VVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKLWIAEKLPSAKSTEYGNS 1520
V + A E + + +E Q L+ + + ++ L AE E
Sbjct: 1965 VQDQQAAEIKQKDARE----LQVQLDVRNKEIAVQKVKAYADLEKAEPT-GPLREEVEQL 2019
Query: 1521 LFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGH--EDSAE--------FTSLI 1570
+ LK K + I E I LI E + + +L+
Sbjct: 2020 ENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALL 2079
Query: 1571 EDLMD---RWQQLKKAVDERRSKLI 1592
++L RW+Q + + + S ++
Sbjct: 2080 DNLNSERGRWEQQSENFNTQMSTVV 2104
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain,
pleckst homology domain, C1 domain, guanine-nucleotide
releasing FA metal-binding; 2.73A {Homo sapiens} PDB:
2d86_A
Length = 587
Score = 37.3 bits (86), Expect = 0.062
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 2225 DDYSKKKHVFRVKADNGAE-YLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAA 2283
D K H+F + D GA+ Y K E KW+ P + +
Sbjct: 465 RDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY---PENATANGHDF 521
Query: 2284 EMRKDE 2289
+M E
Sbjct: 522 QMFSFE 527
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons
protein 2; helix bundle, coiled-coil, endocytosis; 2.70A
{Homo sapiens}
Length = 350
Score = 36.8 bits (84), Expect = 0.083
Identities = 32/212 (15%), Positives = 77/212 (36%), Gaps = 16/212 (7%)
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
+ +RI + L L ER A++E+ + L + + + V
Sbjct: 32 KRTVKRIDDGHRLCSDLMNCLHER-ARIEK--AYAQQLTEWAR------RWRQLVEKGPQ 82
Query: 1091 PSSLADA-EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKA 1149
++ A +++ + + E EK+ Q M + K
Sbjct: 83 YGTVEKAWMAFMSEAERVSELHLEVKASLMNDDF--EKIKNWQKEAFHKQMMGGFKETKE 140
Query: 1150 LRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVEN 1209
DG+ + K W + + + + + + K+ ++ +S++ + SK + +N EQ++
Sbjct: 141 AEDGFRKAQKPWAKKLKEVEAA--KKAHHAACKEEKLAISREAN--SKADPSLNPEQLKK 196
Query: 1210 LIKRHEAFLTTMEANDDKINGVVQFADRLNDE 1241
L + E + +K ++ D+ +
Sbjct: 197 LQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQ 228
>1h67_A Calponin alpha; cytoskeleton, calponin homology domain, actin
binding,; NMR {Gallus gallus} SCOP: a.40.1.1
Length = 108
Score = 34.3 bits (79), Expect = 0.10
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 75 DLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRVHLENM-GS 133
+ L+DG +L +L+ L + + H LEN+ L+ ++ V ++ +
Sbjct: 23 NFMDGLKDGVILCELINKLQPGSVQKVNDPVQNWHKLENIGNFLRAIKHYGVKPHDIFEA 82
Query: 134 HDIVDG 139
+D+ +
Sbjct: 83 NDLFEN 88
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A
{Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20
c.37.1.20
Length = 854
Score = 36.4 bits (85), Expect = 0.14
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 995 QRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKER 1054
Q RL +E ++A + ++ L AE E+E + + R+ ++R E ER
Sbjct: 429 QERLKAIEAEIAKLTEEIAKLRAEWER-EREILRKLREAQHRLDEVRREIELA-----ER 482
Query: 1055 DAKLEEAGDL 1064
L A +L
Sbjct: 483 QYDLNRAAEL 492
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons
protein 2; helix bundle, coiled-coil, endocytosis; 2.00A
{Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A
3q84_A
Length = 312
Score = 35.6 bits (81), Expect = 0.17
Identities = 32/212 (15%), Positives = 77/212 (36%), Gaps = 16/212 (7%)
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
+ +RI + L L ER A++E+ + L + + + V
Sbjct: 32 KRTVKRIDDGHRLCSDLMNCLHER-ARIEK--AYAQQLTEWAR------RWRQLVEKGPQ 82
Query: 1091 PSSLADA-EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKA 1149
++ A +++ + + E EK+ Q M + K
Sbjct: 83 YGTVEKAWMAFMSEAERVSELHLEVKASLMNDDF--EKIKNWQKEAFHKQMMGGFKETKE 140
Query: 1150 LRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVEN 1209
DG+ + K W + + + + + + K+ ++ +S++ + SK + +N EQ++
Sbjct: 141 AEDGFRKAQKPWAKKLKEVEAA--KKAHHAACKEEKLAISREAN--SKADPSLNPEQLKK 196
Query: 1210 LIKRHEAFLTTMEANDDKINGVVQFADRLNDE 1241
L + E + +K ++ D+ +
Sbjct: 197 LQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQ 228
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 34.7 bits (79), Expect = 0.20
Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 30/101 (29%)
Query: 2052 IDEVENLIKKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQTP 2111
I + + L ++ E+ K Q +R L+E + + ++E K
Sbjct: 74 IAQADRLTQEPESIRKWREEQRKR-----------LQE----LDAASKVMEQEWREK--- 115
Query: 2112 PTSPDQSAKDRLDG-----EEVKDKEKEGESRQEKQARGER 2147
AK L+ E +K K +K +
Sbjct: 116 -------AKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQP 149
Score = 32.1 bits (72), Expect = 1.3
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 41/107 (38%)
Query: 2089 ELNKRKEEEE--RKRQEELAAKQTPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQARGE 2146
+ ++ +E E RK +EE + RL +E+ K E ++A+ +
Sbjct: 76 QADRLTQEPESIRKWREE--------------QRKRL--QELDAASKVMEQEWREKAKKD 119
Query: 2147 RPTSGADADHMEGTLVRKHEW-----EAIAK-RASNRSWDKIFVSLR 2187
EW E + K + +NR DK F
Sbjct: 120 -----------------LEEWNQRQSEQVEKNKINNRIADKAFYQQP 149
Score = 30.9 bits (69), Expect = 3.3
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 53/128 (41%)
Query: 1020 VAIEKEHPEEAEAIRERIKQIRIIW-EQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWL 1078
+A +E E+IR+ W E+ + L+E DA +
Sbjct: 74 IAQADRLTQEPESIRK--------WREEQRKRLQELDAASKVM----------------- 108
Query: 1079 TKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDP 1138
++ + +++++ + + + + EK D
Sbjct: 109 ------------------EQEWREKA---KKDLEEWNQRQSEQV---EKNKINNRIADKA 144
Query: 1139 QYMFLRER 1146
F ++
Sbjct: 145 ---FYQQP 149
Score = 29.4 bits (65), Expect = 9.3
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 1002 ERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKL 1058
E D A+ + + E +E+ + ++E + + R I ++ ++ DA +
Sbjct: 100 ELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNR-IADK--AFYQQPDADI 153
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural
genomics, NPPSFA, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 136
Score = 33.7 bits (77), Expect = 0.22
Identities = 15/95 (15%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 46 LADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLPRPTKGK 105
LA + + +++ ++W+ R + L+DG +L + + L + + +
Sbjct: 10 LAQKYDHQREQELREWIEGVTGRRIG--NNFMDGLKDGIILCEFINKLQPGSVKKINEST 67
Query: 106 MRIHCLENVDKALQFLREQRVHLENM-GSHDIVDG 139
H LEN+ ++ + + V ++ ++D+ +
Sbjct: 68 QNWHQLENIGNFIKAITKYGVKPHDIFEANDLFEN 102
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.8 bits (76), Expect = 0.28
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 10/40 (25%)
Query: 356 EKGNLEVLLFTLQSKMRANNQKPYTPKEGKMISDINKAWE 395
EK L+ LQ+ + K Y ++ I E
Sbjct: 18 EKQALK----KLQASL-----KLYADDSAPALA-IKATME 47
Score = 33.4 bits (75), Expect = 0.43
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 12/34 (35%)
Query: 515 LKARRMRLESSLQLQQSFQEMLYILDSMEELKMR 548
LK +L++SL+ LY DS L ++
Sbjct: 22 LK----KLQASLK--------LYADDSAPALAIK 43
Score = 32.6 bits (73), Expect = 0.73
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 17/42 (40%)
Query: 1854 QDLQTLQSQVQQICNESAKLQASYAGEKAKEITNREAEVVNA 1895
Q L+ LQ+ S KL YA + A A + A
Sbjct: 20 QALKKLQA--------SLKL---YADDSAP------ALAIKA 44
Score = 31.1 bits (69), Expect = 2.1
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 14/32 (43%)
Query: 780 QSLLKKHKDVTEELKNYA----------STIE 801
Q+L KK + LK YA +T+E
Sbjct: 20 QAL-KK---LQASLKLYADDSAPALAIKATME 47
Score = 31.1 bits (69), Expect = 2.6
Identities = 11/64 (17%), Positives = 18/64 (28%), Gaps = 34/64 (53%)
Query: 1423 QKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQ 1482
+KQ + +L+ L+ D SA P LA +
Sbjct: 18 EKQALK------------KLQAS---LKLYADD---------SA----------PALAIK 43
Query: 1483 RALE 1486
+E
Sbjct: 44 ATME 47
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene
regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1
PDB: 1pms_A 1awe_A
Length = 354
Score = 34.9 bits (80), Expect = 0.33
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 2190 LLYFYKDQKSAKSSPEIY--YKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQ 2247
++ + + Y+ + F +R DD ++ KH F + + +F
Sbjct: 271 MICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFS 330
Query: 2248 AKNDEEMNKWVTALSNV 2264
AK+ EE N W+ AL ++
Sbjct: 331 AKSAEEKNNWMAALISL 347
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral
protein complex, cell cycle; 2.30A {Homo sapiens} PDB:
2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Length = 704
Score = 34.5 bits (78), Expect = 0.46
Identities = 40/338 (11%), Positives = 116/338 (34%), Gaps = 21/338 (6%)
Query: 967 TVSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEH 1026
++ + K ++ + + + T + + + + +
Sbjct: 373 LAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQSILTKSRSVIE 432
Query: 1027 PEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVA 1086
+ + + IK++ + ++ ++L E L+E LR F+ +T ++
Sbjct: 433 QGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLR--AKFKERWQRTPSNEL 490
Query: 1087 SEDTPSSLADAEKLLNQ----HQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142
+ + + +L++ ++E ++ + + ++ A + + + M
Sbjct: 491 YKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPSANPAKTMQ 550
Query: 1143 LRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPV 1202
E + L+ L ++ + R+ L + D K ++ + + +
Sbjct: 551 GSEVVNVLKSLLSNLDEVKKEREGLEN----------DLKSVNFDMTSKFLTALAQDGVI 600
Query: 1203 NLEQV--ENLIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRR 1260
N E + L + + T ++ + K G+++ + E ++ K N+ +
Sbjct: 601 NEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQE--FSKMKQSNNEANLREEV 658
Query: 1261 NANKERAHQQMETLKDQLQ-LHQFLQDCEELGEWVQEK 1297
N A+ L L+ +F + E+ Q K
Sbjct: 659 LKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNK 696
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta;
complex (SH2 domain/DNA), SH2 domain, transcription
factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1
b.2.5.5 d.93.1.1
Length = 575
Score = 34.5 bits (78), Expect = 0.49
Identities = 23/163 (14%), Positives = 55/163 (33%), Gaps = 3/163 (1%)
Query: 1524 VHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKA 1583
V ++ + +SL D ++ + + N + D + L++ + +K
Sbjct: 18 VMCIEHEIKSLEDLQDEYDFKCKTLQNREHETNGVAKSDQKQEQLLLKKMYLMLDNKRKE 77
Query: 1584 VDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEISTQNLMKKHETLELA 1643
V + +L+ + Q E W Q+ G L + +
Sbjct: 78 VVHKIIELLNVTELTQNALINDELVEWKRRQQSA---CIGGPPNACLDQLQNWFTIVAES 134
Query: 1644 VEDYADTIRQLGETARQLTSEMHPESDQIALKQSQVDKLYAGL 1686
++ +++L E ++ T E P + + + L+ L
Sbjct: 135 LQQVRQQLKKLEELEQKYTYEHDPITKNKQVLWDRTFSLFQQL 177
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 34.2 bits (79), Expect = 0.50
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 21/118 (17%)
Query: 1034 RERIKQIRIIWEQLTQMLKERDAKLEEAGD-LHRFLRDLDHFQVWLTKTQ-TD------V 1085
+ + ++ +L +++K R + D L L D L+ + D
Sbjct: 194 GKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLF 253
Query: 1086 ASEDT-PSSLADAEKLLNQH----QAIREEIDNYT-------EDYKKMMDYGEKVTAE 1131
A +T S+L+ LL QH + +R+E + E KK M Y ++V E
Sbjct: 254 AGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKK-MPYLDQVLQE 310
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP;
1.65A {Bacillus circulans}
Length = 428
Score = 34.1 bits (79), Expect = 0.53
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 50/140 (35%)
Query: 399 KAEHERELALR-----------EELIRQEKLEQLAARFNRKA--SMR------------E 433
K E E+A++ EEL +E+LA + N+ A ++R +
Sbjct: 95 KKRSELEIAVQSGIYCIIAESVEEL---FYIEELAEKENKTARVAIRINPDKSFGSTAIK 151
Query: 434 TWLSENQRLVSQDNFGFDLGAVEAA---AKKHEAIE------------TDIFAYEERVQA 478
Q FG D ++A + + + + + E ++
Sbjct: 152 MGGVPRQ-------FGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKY 204
Query: 479 VVTVSQELEAEKYHDIDRIN 498
V + + + + IN
Sbjct: 205 TVDLGRNIYERYGIVCECIN 224
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small
molecular weight G-protein, complex, protein-protein
complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Length = 354
Score = 34.1 bits (78), Expect = 0.54
Identities = 14/83 (16%), Positives = 25/83 (30%)
Query: 2195 KDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254
+ P YKN G + D + R Y+ QA +
Sbjct: 247 GGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAIS 306
Query: 2255 NKWVTALSNVCEQQASGGPSSRS 2277
W+ ++ + E Q + +S
Sbjct: 307 QAWIKHVAQILESQRDFLNALQS 329
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding,
metal-binding, phosphoprotein, exchange factor, RAC,
GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A
1f5x_A
Length = 406
Score = 34.0 bits (78), Expect = 0.56
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 2225 DDYSKKKHVFRVKADNGAE-YLFQAKNDEEMNKWVTALSNVCEQQ 2268
D K H+F + D GA+ Y K E KW+
Sbjct: 293 RDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNI 337
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 34.0 bits (76), Expect = 0.58
Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 30/219 (13%)
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
+ +RI + L L ER A++E+ + L + + + V
Sbjct: 25 KRTVKRIDDGHRLCSDLMNCLHER-ARIEK--AYAQQLTEWAR------RWRQLVEKGPQ 75
Query: 1091 PSSLADA--------EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142
++ A E++ H ++ + N D EK+ Q M
Sbjct: 76 YGTVEKAWMAFMSEAERVSELHLEVKASLMN---------DDFEKIKNWQKEAFHKQMMG 126
Query: 1143 LRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPV 1202
+ K DG+ + K W + + + + A E L+ SK + +
Sbjct: 127 GFKETKEAEDGFRKAQKPWAKKLKEVEAAKK----AHHAACKEEKLAISREANSKADPSL 182
Query: 1203 NLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDE 1241
N EQ++ L + E + +K ++ D+ +
Sbjct: 183 NPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQ 221
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein
1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A
{Mus musculus} PDB: 2x3w_A 2x3x_A
Length = 337
Score = 33.7 bits (76), Expect = 0.60
Identities = 39/261 (14%), Positives = 96/261 (36%), Gaps = 16/261 (6%)
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
+ +RI + L ++ER AK+E+ + L D + + +
Sbjct: 23 KRTVKRIDDGHRLCNDLMSCVQER-AKIEK--AYAQQLTDWAK------RWRQLIEKGPQ 73
Query: 1091 PSSLADA-EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKA 1149
SL A ++ + + E + + EKV Q M + K
Sbjct: 74 YGSLERAWGAMMTEADKVSELHQEVKNSL--LNEDLEKVKNWQKDAYHKQIMGGFKETKE 131
Query: 1150 LRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVEN 1209
DG+ + K W + + L + + ++ K+ + ++++ + SK E V EQ +
Sbjct: 132 AEDGFRKAQKPWAKKMKELEAA--KKAYHLACKEERLAMTREMN--SKTEQSVTPEQQKK 187
Query: 1210 LIKRHEAFLTTMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQ 1269
L+ + + ++ +K V++ + + ++V ++ ++R +
Sbjct: 188 LVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLL 247
Query: 1270 QMETLKDQLQLHQFLQDCEEL 1290
++ + + ++ EL
Sbjct: 248 DIKRHLNLAENSSYMHVYREL 268
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide,
pleckst homology domain, guanine-nucleotide releasing
factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus
musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Length = 347
Score = 33.5 bits (76), Expect = 0.74
Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 12/104 (11%)
Query: 2170 IAKRASNRSW-DKIFVSLRGTLLYFYKDQKSAKSSP----------EIYYKNETPFELRG 2218
+ ++W + F+ L YF + FEL
Sbjct: 220 LKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYN 279
Query: 2219 GSAQVADDYSKKKHVF-RVKADNGAEYLFQAKNDEEMNKWVTAL 2261
S + + K RV N Y A + EE +W+ ++
Sbjct: 280 PSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSI 323
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 34.1 bits (78), Expect = 0.76
Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 25/133 (18%)
Query: 954 AHGVQTFHIECRET----VSWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQ 1009
GV+TF + E + + + L + DL G + + ++ A ++
Sbjct: 691 KMGVRTFSQK--EMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ---FVPELKEFTAKLR 745
Query: 1010 AKLDSLEAEAVAIEKEHPEEAEAI----------------RERIKQIRIIWEQLTQMLKE 1053
+L A+ E E + + R I+ + Q+ +
Sbjct: 746 KELVETSEVRKAVSIETALEHKVVNGNSADAAYAQVEIQPRANIQLDFPELKPYKQVKQI 805
Query: 1054 RDAKLEEAGDLHR 1066
A+LE DL R
Sbjct: 806 APAELEGLLDLER 818
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission,
GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A
{Rattus norvegicus} PDB: 3snh_A
Length = 772
Score = 33.7 bits (76), Expect = 0.86
Identities = 51/432 (11%), Positives = 130/432 (30%), Gaps = 38/432 (8%)
Query: 990 GIMTLQRRLSG-----MERDL----AAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQI 1040
G LQ+ L+ + L +Q++L S+E E + P++ + + Q+
Sbjct: 293 GTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQM 352
Query: 1041 RIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKL 1100
+ + E + +L R F + ++
Sbjct: 353 VQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKEL-------- 404
Query: 1101 LNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEE-LHK 1159
+ I I N + + T D ++++++ L++ + +
Sbjct: 405 ---RREISYAIKNIHDIRTGLF-----------TPDLAFEATVKKQVQKLKEPSIKCVDM 450
Query: 1160 MWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLT 1219
+ + + + + + E + + + E EQV LI A++
Sbjct: 451 VVSELTSTIRKCS--EKLQQYPRLREEMERIVTTHIREREGRTK-EQVMLLIDIELAYMN 507
Query: 1220 TMEANDDKINGVVQFADRLNDEDHYAADKVKKKADNINDRRNANKERAHQQMET--LKDQ 1277
T + Q ++++N + N E +
Sbjct: 508 TNHEDFIGFANAQQRSNQMNKKKTSGNQDEILVIRKGWLTINNIGIMKGGSKEYWFVLTA 567
Query: 1278 LQLHQFLQDCEELGEWVQEKKFTAQDETYRSAKTVHSKWTRHQAFEAEIASNKDRLLRVQ 1337
L + D E+ +++ + + + + + + + +L
Sbjct: 568 ENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELAC 627
Query: 1338 QSGSELMKEKPE-LAELIGPKISDLGQQFDDLETTTKDKGERLFDSNREVLIHQTCDDID 1396
++ E+ K L + P+ ++ + E D D E + + +D
Sbjct: 628 ETQEEVDSWKASFLRAGVYPERVGDKEKASETEENGSDSFMHSMDPQLERQVETIRNLVD 687
Query: 1397 SWMNELEKQIEN 1408
S+M + K + +
Sbjct: 688 SYMAIVNKTVRD 699
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo
sapiens}
Length = 190
Score = 32.6 bits (74), Expect = 0.91
Identities = 20/118 (16%), Positives = 37/118 (31%), Gaps = 11/118 (9%)
Query: 33 SSSRLFERSRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEV 92
S + R + + ++W+ + L +L LR+G L KL
Sbjct: 5 SLTAEEMDERRRQNVAYEYLCHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNF 64
Query: 93 LSGERLP----------RPTKGKMRIHCLENVDKALQFLREQRVHLENM-GSHDIVDG 139
S + + R + +NV + L + E + + DI D
Sbjct: 65 FSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDR 122
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC),
endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Length = 510
Score = 33.5 bits (76), Expect = 1.0
Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Query: 2190 LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAK 2249
+ ++ + S + +TP L ++ D S + VF + Y +
Sbjct: 287 AVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSDEPVFHISH-IDRVYTLRTD 345
Query: 2250 NDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAAEMRKDEPKRRS 2294
N E WV + EQ R + A + R
Sbjct: 346 NINERTAWVQKIKAASEQYIDTEKKQREKAYQARSQKTSGIGRLM 390
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase,
guanine-nucleotide releas factor, phosphorylation,
signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1
b.55.1.1 PDB: 2nz8_B 2kr9_A
Length = 311
Score = 33.2 bits (76), Expect = 1.0
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 2190 LLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAE--YLFQ 2247
L F K+ K + + YK++ G + V D K V ++ + +
Sbjct: 232 SLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGD--PCKFALWVGRTPTSDNKIVLK 289
Query: 2248 AKNDEEMNKWVTALSNVCEQQ 2268
A + E W+ + V +++
Sbjct: 290 ASSIENKQDWIKHIREVIQER 310
>1wyr_A RHO guanine nucleotide exchange factor 6; CH domain, all-alpha,
NPPSFA, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Length = 121
Score = 31.4 bits (71), Expect = 1.1
Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 75 DLYVDLRDGKMLLKLLEVLSGERLPR-PTKGKMRIHCLENVDKALQFLREQRVHL 128
L L++G +L KL+ L + + + C+ N++ L+ +V +
Sbjct: 34 FLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNINDFLKGCATLQVEI 88
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown
function, PSI-2, protein struct initiative; 1.49A
{Pseudomonas aeruginosa}
Length = 122
Score = 31.4 bits (72), Expect = 1.1
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 11/46 (23%)
Query: 1043 IWEQLTQMLKERDAKLEEAG-DLHR------FLRDLDHF----QVW 1077
I +Q Q+L+ D L+ G D + L + + QVW
Sbjct: 35 IQDQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVW 80
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex,
DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich
sequence, cytoskeleton; 2.10A {Homo sapiens}
Length = 184
Score = 32.4 bits (73), Expect = 1.1
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 454 AVEAAAKKHEAIETDIFAYEERVQAVVTVSQELEAEKYHDIDRINARKENVLRLWNYLLE 513
E +K E I A Q V T E + + ++KE L++ + + +
Sbjct: 73 IKEVTVEKRRNTENIIPAEIPLAQEVTTTLWEWGS--IWKQLYVASKKERFLQVQSMMYD 130
Query: 514 LLKARRMRLESSLQLQQSFQEMLYILDSMEELKMRLLSD-DYGKHLMGVE 562
L++ R L +L + ++ELK ++ S DYG ++ ++
Sbjct: 131 LMEWRSQLLSGTLPKDE-----------LKELKQKVTSKIDYGNKILELD 169
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA
methyltransferase fold, maintenance methyla transferase;
HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A*
3pt6_A* 3pt9_A* 4da4_A*
Length = 1002
Score = 33.3 bits (75), Expect = 1.3
Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 28/177 (15%)
Query: 2085 FELKELNKRKEEEERKRQEELAAKQTPPTSPDQSAKDRLDGEEV--KDKEKEGESRQEKQ 2142
E + ++ +R+R Q P G+ KD K G S + KQ
Sbjct: 38 IEKDDREDKENAFKRRRCGVCEVCQQPE-----------CGKCKACKDMVKFGGSGRSKQ 86
Query: 2143 ARGERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKS 2202
A ER + + K + + + + K+
Sbjct: 87 ACQERRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQ-GKKKKQNKNRISWVGEAVKTDGK 145
Query: 2203 SPEIYYK----NETPFELRGGSAQV-ADDYSKKKHVFRVKADNGAEYLFQAKNDEEM 2254
+ YYK + E+ G V DD SK ++ RV L++ ++ +M
Sbjct: 146 --KSYYKKVCIDAETLEV-GDCVSVIPDDSSKPLYLARV------TALWEDSSNGQM 193
>3gtz_A Putative translation initiation inhibitor; structural genomics,
unknown function, PSI-2, protein struct initiative; 2.50A
{Salmonella typhimurium}
Length = 124
Score = 31.1 bits (71), Expect = 1.4
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 11/46 (23%)
Query: 1043 IWEQLTQMLKERDAKLEEAG-DLHR------FLRDLDHFQ----VW 1077
+EQ L + DA LE+ G R FL D F W
Sbjct: 37 AFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAW 82
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange
factor (GEF), small G-protein, signaling protein; 2.40A
{Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A
1rj2_A
Length = 353
Score = 32.6 bits (74), Expect = 1.4
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 2222 QVADDYSKKKHVFRVKADNGAE-YLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQ 2278
+ ++ F + + E Y+ QA E WV A+ V Q +
Sbjct: 280 GITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQACREASQH 337
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain,
alternative splicing, cytoplasm, guanine- nucleotide
releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Length = 346
Score = 32.8 bits (75), Expect = 1.4
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 2210 NETPFELRGGSAQVADDYSKKKHVFRVKADNGA---EYLFQAKNDEEMNKWVTALSN 2263
+ L G + + K+ FRV NG+ + QA + +W+ +
Sbjct: 287 QDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQ 343
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 32.7 bits (75), Expect = 1.7
Identities = 24/186 (12%), Positives = 62/186 (33%), Gaps = 18/186 (9%)
Query: 1332 RLLRVQQSGSELMKEKPELAELIGPKISDLGQQFDDLETTTKDKGERLFD-----SNREV 1386
+ Q+ L+K +P +A ++ + LE ++ E L V
Sbjct: 828 AIYNSLQTKLRLIKREPFVAPAGLTPN-EIDSTWSALEKAEQEHAEALRIELKRQKKIAV 886
Query: 1387 LIHQTCDD---IDSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAKQVSELE 1443
L+ + +++W + + +TG + +V ++ + + + +
Sbjct: 887 LLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEAFDGECQSLEG---QSN 943
Query: 1444 TQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRDIEDEKL 1503
+ + + + V + + E+ + ++ E Y+ E E+L
Sbjct: 944 SDLLSILAQLTELNYNGVPELT------ERKDTFFAQQWTGVKSSAETYKNTLLAELERL 997
Query: 1504 WIAEKL 1509
E L
Sbjct: 998 QKIEDL 1003
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical,
calmodulin-binding, cell membrane, membrane,
phosphoprotein, protein binding; 2.50A {Homo sapiens}
Length = 193
Score = 31.9 bits (72), Expect = 1.8
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 11/110 (10%)
Query: 41 SRIKALADERESVQKKTFQKWVNSHLVRVSCRIGDLYVDLRDGKMLLKLLEVLSGERLP- 99
R + + ++W+ + L +L LR+G L KL S + +
Sbjct: 35 ERRRQNVAYEYLCHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSL 94
Query: 100 ---------RPTKGKMRIHCLENVDKALQFLREQRVHLENM-GSHDIVDG 139
R + +NV + L + E + + DI D
Sbjct: 95 KKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDR 144
>1wyn_A Calponin-2; CH domain, F-actin binding, all alpha helix, structural
genomics, NPPSFA, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 146
Score = 31.4 bits (71), Expect = 1.8
Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 75 DLYVDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLENVDKALQFLREQRVHLENM-GS 133
D L+DG +L L+ L +P+ + H LEN+ ++ + ++ ++ +
Sbjct: 37 DFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQLENLSNFIKAMVSYGMNPVDLFEA 96
Query: 134 HDIVDG 139
+D+ +
Sbjct: 97 NDLFES 102
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta
sandwich (PH), signaling protein; 2.13A {Homo sapiens}
SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Length = 385
Score = 32.2 bits (73), Expect = 2.0
Identities = 16/137 (11%), Positives = 40/137 (29%), Gaps = 11/137 (8%)
Query: 2136 ESRQEKQARGERPTSGADADHMEGTLVRKHEWEAIAKRASNRSWDK---------IFVSL 2186
++ K + + D + ++ HE + K +++ D + +
Sbjct: 232 DTSSLKLSEYPNVEELRNLDLTKRKMI--HEGPLVWKVNRDKTIDLYTLLLEDILVLLQK 289
Query: 2187 RGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGAEYLF 2246
+ L K S+ + + +L + +K V + + Y
Sbjct: 290 QDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYEL 349
Query: 2247 QAKNDEEMNKWVTALSN 2263
A+ E W +
Sbjct: 350 VAQTVSEKTVWQDLICR 366
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics,
northeast structural genomics consortiu PSI-biology,
calponin-homology domain; NMR {Homo sapiens}
Length = 126
Score = 30.7 bits (69), Expect = 2.1
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 74 GDLYVDLRDGKMLLKLLEVLSGERLPR-PTKGKMRIHCLENVDKALQFLRE 123
G L L+DG +L +LLE L + + + + CL N+ + L+
Sbjct: 39 GFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESECLSNIREFLRGCGA 89
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics,
oxford protein production facility, UN function; 1.90A
{Neisseria meningitidis serogroup B} PDB: 3kjk_A
Length = 128
Score = 30.7 bits (70), Expect = 2.2
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 11/46 (23%)
Query: 1043 IWEQLTQMLKERDAKLEEAG-DLHR------FLRDLDHF----QVW 1077
EQ +L + D L E G D +LRD+ + VW
Sbjct: 43 AAEQTADVLAQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVW 88
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase,
rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB:
3odo_A
Length = 377
Score = 32.2 bits (73), Expect = 2.3
Identities = 41/288 (14%), Positives = 92/288 (31%), Gaps = 33/288 (11%)
Query: 2003 NALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKH 2062
+ L+ R +E ++ I +V D A + + L ++++ +K
Sbjct: 87 DRLMKRRQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFAL--EQLKAKQRKD 144
Query: 2063 EAFEKSAIAQEERFSALERLTTFE---------------LKELNKRKEEEERKRQEELAA 2107
F + + + E RL + L+ + + EE + + ELAA
Sbjct: 145 PRF-CAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAA 203
Query: 2108 K--QTPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKH 2165
+ + +Q+ +D D +KD ++ + +Q+ + + D + LV +
Sbjct: 204 ECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEG 263
Query: 2166 EWEAIAKRASNRSWDKIFVSL----------RGTLLYFYKDQKSAKSSPEIYYKNETPFE 2215
+ R + ++ V L + L ++ +P+
Sbjct: 264 P---LTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLR 320
Query: 2216 LRGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSN 2263
L + K +V Y A+ E W ++
Sbjct: 321 LTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITE 368
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse,
BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3qe6_A
Length = 320
Score = 32.1 bits (72), Expect = 2.4
Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 30/219 (13%)
Query: 1031 EAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDT 1090
+R++ + L +ER A++E+ + L D K + V
Sbjct: 23 RRTVQRVEDGHRLCGDLVSCFQER-ARIEK--AYAQQLADWAR------KWRGAVEKGPQ 73
Query: 1091 PSSLADA--------EKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142
+L A E+L H +RE++ E+V +
Sbjct: 74 YGTLEKAWHAFFTAAERLSELHLEVREKLHG---------PDSERVRTWQRGAFHRPVLG 124
Query: 1143 LRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRDAKQAEVLLSQQEHVLSKDETPV 1202
+A DG+ + K W R + + S + ++ K + +++ H +K ++ +
Sbjct: 125 GFRASRAAEDGFRKAQKPWLKRLKEVEAS--KKSYHTARKDEKTAQTRESH--AKADSSM 180
Query: 1203 NLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLNDE 1241
+ EQ+ L +R E + + +R
Sbjct: 181 SQEQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPR 219
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Length = 155
Score = 30.7 bits (69), Expect = 2.5
Identities = 15/110 (13%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 38 FERSRIKALADERESVQKKTFQKWVNS----HLVRVSCRIGDLYVDLRDGKMLLKLLEVL 93
S + + + ++ ++ +W+ + + R + L+DG +L +L+ L
Sbjct: 2 SSGSSGQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINAL 61
Query: 94 ---SGERLPRPTKGKMRIHCLENVDKALQFLREQRVHLENM-GSHDIVDG 139
+ + M +E + + LQ ++ ++ + D+ +G
Sbjct: 62 YPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEG 111
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding
protein; iron-vibriobactin transport protein; HET: VBN;
1.45A {Vibrio cholerae} PDB: 3r5s_A*
Length = 305
Score = 31.7 bits (72), Expect = 2.7
Identities = 12/122 (9%), Positives = 35/122 (28%), Gaps = 8/122 (6%)
Query: 1675 KQSQVDKLYAGLKDLAGERRAKLDEAL-KLFMLNREVDDLEQWIAEREVVAGS--HELGQ 1731
+ Q ++ + + R LD + +++ + +A+ + +G
Sbjct: 136 LEEQAERTIHNFEQWTKQVRDVLDLPKGRANIVSYHGPGVVNAVAKAQSAHAQLLQSVGV 195
Query: 1732 DYDHVTLLWERFKEFDRDTEAIGTERVAAVNGIADQLIAAGHSDSATIAEWKDGLNEAWQ 1791
+ W+ RD I E + + + + + +
Sbjct: 196 VLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQA--ETTFLIT-MTDQQAQAFLH--DPILK 250
Query: 1792 DL 1793
+L
Sbjct: 251 NL 252
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Length = 526
Score = 31.9 bits (72), Expect = 2.8
Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 19/176 (10%)
Query: 1445 QAEILQKTVPDKMEEIVVKKSAVEQRFE-KIKEPLLARQRALEK----KKEAYQFRRDIE 1499
QA +L V EEI S E+ + K+KE ++ L + K +F +++E
Sbjct: 71 QAVLLN--VLGSGEEIPDPLSPGERGIQAKLKELEDEQRNELVRLKYNDKIKEKFGKELE 128
Query: 1500 DEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQSLAKEIDNHEPRINLICNNGRKLIDEG 1559
+ + ++ +L K S K + + ++ + L E
Sbjct: 129 E-----VYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRL---ATALQKEI 180
Query: 1560 HEDSAEFTSLIEDLMDRWQQLKKAVDERRSKLIQSEKAQQYLFDASE--AESWMSE 1613
E + T ++++ D+ LK A++ R + E+A Q + + E+ E
Sbjct: 181 GERTHAETVMVKEYRDKIDALKNAIEVERDGMQ--EEAIQEIAGMTADVLEAASEE 234
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex,
cytoplasm, ribonucleoprotein, structural protein; 3.50A
{Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A
Length = 861
Score = 32.1 bits (72), Expect = 2.9
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 1/110 (0%)
Query: 2066 EKSAIAQEERFSALERLTTFELKELNKRKEEEERKRQEELAAKQTPPTSPDQSAKDRLDG 2125
E +A + +R R K L++ + E+ RK EL A S + +
Sbjct: 670 EAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESR 729
Query: 2126 EEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKHEWEAIAKRAS 2175
E E EG Q K + + +A+ VR+ E +
Sbjct: 730 AEAARIEGEGSVLQAKL-KAQALAIETEAELERVKKVREMELIYARAQLE 778
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding,
ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP:
a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Length = 543
Score = 31.7 bits (73), Expect = 3.0
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
A L L AE V I K+ + E I RI I+ E + L+ER A
Sbjct: 309 NATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLA 368
Query: 1057 KL 1058
KL
Sbjct: 369 KL 370
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A
{Mycobacterium tuberculosis} PDB: 1sjp_A
Length = 546
Score = 31.8 bits (73), Expect = 3.0
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
A L L +A V + K+ + +AI R+ QIR E + L+ER A
Sbjct: 309 NADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLA 368
Query: 1057 KL 1058
KL
Sbjct: 369 KL 370
>1div_A Ribosomal protein L9; rRNA-binding; 2.60A {Geobacillus
stearothermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 1giy_K
1yl3_K 2b66_I 2b9n_I 2b9p_I 487d_K
Length = 149
Score = 30.6 bits (70), Expect = 3.0
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 2087 LKELNKRKEEEERKRQEELAAKQTPPTSPDQSAKDRLDGEEVKDKEKEGES 2137
LK L +K++E+R+ EELA + K++L+ V K GE
Sbjct: 44 LKALEAQKQKEQRQAAEELANA--------KKLKEQLEKLTVTIPAKAGEG 86
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP:
a.129.1.1 c.8.5.1 d.56.1.1
Length = 545
Score = 31.8 bits (73), Expect = 3.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
+D L A+ V+I K++ E I R+ QIR E+ T + L+ER A
Sbjct: 311 NVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVA 370
Query: 1057 KL 1058
KL
Sbjct: 371 KL 372
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding,
nucleotide-binding, phosphorylation, acetylation,
alternative splicing, coiled coil; HET: GDP GTP; 4.00A
{Homo sapiens}
Length = 427
Score = 31.6 bits (71), Expect = 3.3
Identities = 24/155 (15%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 1379 LFDSNREVLIHQTCDDI-DSWMNELEKQIENEDTGSDLASVNILMQKQQMIETQMAVKAK 1437
L N E L QT + + +++ +DT D ++ + + K
Sbjct: 278 LIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQK 337
Query: 1438 QVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLARQRALEKKKEAYQFRRD 1497
+ E+ ++ + V +K E+ + + ++F+++K+ ++ LE K ++
Sbjct: 338 KEEEMR---QMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDK------KKS 388
Query: 1498 IEDEKLWIAEKLPSAKSTEYGNSLFNVHMLKKKNQ 1532
++DE ++ +A+ + S K+++
Sbjct: 389 LDDEVNAFKQRKTAAELLQSQGSQAGGSQTLKRDK 423
>3e5d_A Putative glyoxalase I; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Length = 127
Score = 29.9 bits (67), Expect = 3.4
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 8/100 (8%)
Query: 1044 WEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTKTQTDVASEDTPSSLADAEKLLNQ 1103
+ + + G FL D ++ + S + E L
Sbjct: 21 YVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIM-------SRTDVTGKTTGENLGWA 73
Query: 1104 HQAIR-EEIDNYTEDYKKMMDYGEKVTAEPSTHDDPQYMF 1142
H AI + E +K+ G + EP D Y
Sbjct: 74 HIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYES 113
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen,
blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP:
h.1.8.1 PDB: 1ei3_A
Length = 491
Score = 31.5 bits (70), Expect = 3.5
Identities = 17/124 (13%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 1387 LIHQTCDDIDSWMNELEKQIE-----NEDTGSDLASV-NILMQKQQMIETQMAVKAKQVS 1440
+I T + ++ + +Q+ + + + NIL + + +
Sbjct: 55 IIDDTDQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVST 114
Query: 1441 ELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIK--EPLLARQRALEKKKEAYQFRRDI 1498
EL + L++ V ++ I +++++++ ++K E + + K A F +
Sbjct: 115 ELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQV 174
Query: 1499 EDEK 1502
+ E
Sbjct: 175 DKEG 178
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase,
rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB:
3odx_A
Length = 536
Score = 31.6 bits (71), Expect = 3.7
Identities = 40/286 (13%), Positives = 93/286 (32%), Gaps = 31/286 (10%)
Query: 2003 NALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLMSMELGLTIDEVENLIKKH 2062
+ L+ R +E ++ I +V D A + + L ++++ +K
Sbjct: 240 DRLMKRRQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFAL--EQLKAKQRKD 297
Query: 2063 EAFEKSAIAQEERFSALERLTTFE---------------LKELNKRKEEEERKRQEELAA 2107
F + + + E RL + L+ + + EE + + ELAA
Sbjct: 298 PRF-CAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAA 356
Query: 2108 K--QTPPTSPDQSAKDRLDGEEVKDKEKEGESRQEKQARGERPTSGADADHMEGTLVRKH 2165
+ + +Q+ +D D +KD ++ + +Q+ + + D + LV H
Sbjct: 357 ECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLV--H 414
Query: 2166 EWEAIAKRASNRSWDK---------IFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
E + +++ + + + + L ++ +P+ L
Sbjct: 415 EGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRL 474
Query: 2217 RGGSAQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALS 2262
+ K +V Y A+ E W ++
Sbjct: 475 TSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALIT 520
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET:
ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1
d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A
1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A
1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Length = 547
Score = 31.8 bits (73), Expect = 3.7
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
+A L+ L +A+ V I K+ E AI+ R+ QIR E+ T + L+ER A
Sbjct: 310 KATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVA 369
Query: 1057 KL 1058
KL
Sbjct: 370 KL 371
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains,
kinase transferase, PSI-2, protein structure initiative;
HET: LYS; 3.00A {Clostridium acetobutylicum}
Length = 446
Score = 31.5 bits (72), Expect = 4.1
Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 1795 ELIETRTQMLVASRELHKFFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQ 1854
+ + T +L K D+ IS+++ + EL D L++ +
Sbjct: 47 KDYKI-TDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEK----VKK 101
Query: 1855 DLQTLQSQ 1862
+++ S
Sbjct: 102 NIENGASS 109
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A
{Xenorhabdus nematophila} PDB: 1kid_A 1fy9_A 1la1_A
1fya_A 1jon_A 1dk7_A 1dkd_A
Length = 201
Score = 30.6 bits (70), Expect = 4.7
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
+A L+ L +A+ V I K+ E AI R+ QIR E+ T + L+ER A
Sbjct: 133 KATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQIRQQIEESTSDYDREKLQERVA 192
Query: 1057 KL 1058
KL
Sbjct: 193 KL 194
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein,
dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Length = 224
Score = 30.6 bits (68), Expect = 4.7
Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 13/104 (12%)
Query: 2172 KRASNRSWDKIFVSLRGT-------LLYFYKDQKSAKSSPEIYYKNETPFELRGG-SAQV 2223
K + W ++ LR L+ YKD+ + + L +
Sbjct: 16 KLRDGKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGL----RERSSLTLEDICGLEP 71
Query: 2224 ADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVCEQ 2267
A Y H + + A + + E M W T + +
Sbjct: 72 ALPYEGLAHTLAIICLSQA-VMLGFDSHEAMCAWDTRIRYALGE 114
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding;
2.20A {Mycobacterium tuberculosis}
Length = 194
Score = 30.2 bits (69), Expect = 5.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 1009 QAKLDSL-EAEAVAIEKEH------PEEAEAIRERIKQIRIIWEQLT-----QMLKERDA 1056
+ L+ L A V + K+ AEA+ R K +R ++ + L ER A
Sbjct: 126 EVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRAEIDKSDSDWDREKLGERLA 185
Query: 1057 KL 1058
KL
Sbjct: 186 KL 187
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB:
3pvq_A
Length = 306
Score = 30.8 bits (69), Expect = 5.5
Identities = 6/38 (15%), Positives = 13/38 (34%)
Query: 292 VGIAMDNDRMIHEYESLTSDLLRWIQETIASLGDRQFA 329
VGI + N + IH + + + ++
Sbjct: 244 VGIYLGNKQFIHALGDVHVSSMNPADQNYDEFNTKRLL 281
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP:
k.9.1.1
Length = 73
Score = 28.3 bits (62), Expect = 5.6
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 969 SWIEDKKRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPE 1028
SW E K+R L I T + L G E +LAA + ++ + E+E A + +
Sbjct: 3 SWAEFKQR-----------LAAIKTRLQALGGSEAELAAFEKEIAAFESELQAYKGKGNP 51
Query: 1029 EAEAIRERIKQIR 1041
E EA+R+ IR
Sbjct: 52 EVEALRKEAAAIR 64
>3zyl_A Phosphatidylinositol-binding clathrin assembly PR; endocytosis,
endobrevin, synaptobrevin, VAMP2, VAMP3, AP180, membrane,
adaptor protein; 1.70A {Rattus norvegicus} PDB: 3zyk_A
1hf8_A 1hfa_A* 1hg2_A* 1hg5_A*
Length = 271
Score = 30.5 bits (68), Expect = 5.7
Identities = 20/177 (11%), Positives = 66/177 (37%), Gaps = 10/177 (5%)
Query: 1121 MMDYGEKVTAEPSTHDDPQYMFLRERLKALRDGWEELHKMWENRQQLLSQSLNLQMFNRD 1180
M+ E+ ++ + + K+ G++ + + L ++++ + D
Sbjct: 93 MVYGNERFIQYLASRNTLFNL-SNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFD 151
Query: 1181 AKQAEVLLSQQEHVLSKDETPVNLEQVENLIKRHEAFLTTMEANDDKINGVVQFADRLND 1240
+ + ++ ++ + ++N + +A L +++ NGV+ A L
Sbjct: 152 FTKVKRGADGVMRTMNTEKLLKTVPIIQNQM---DALLDFNVNSNELTNGVINAAFMLLF 208
Query: 1241 ED-----HYAADKVKKKADNINDRRNANKERAHQQMETLKDQL-QLHQFLQDCEELG 1291
+D + + + D + + + ++ ++ +FL+ E++G
Sbjct: 209 KDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 265
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY
crystallography, regulation of RHOA GTPase, protein
complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1
PDB: 3kz1_A*
Length = 368
Score = 30.6 bits (69), Expect = 5.9
Identities = 12/88 (13%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Query: 2182 IFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNG 2241
+ + + L K+A S + +L + + + K+ F +
Sbjct: 281 VLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKL--NAVLIRSVATDKRAFFIICTSKL 338
Query: 2242 A---EYLFQAKNDEEMNKWVTALSNVCE 2266
Y A + N W+ L
Sbjct: 339 GPPQIYELVALTSSDKNTWMELLEEAVR 366
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain,
alloste S-adenosylmethionine, lysine, allosteric
effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis
thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Length = 510
Score = 30.8 bits (70), Expect = 6.0
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 15/109 (13%)
Query: 1800 RTQMLVASREL----HKFFHDCKDILGRISEKHHAMSDELGRDAGSVNTLQRKHQNFLQD 1855
T L+ + E + L I E H EL D + T + + L+
Sbjct: 69 TTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKG 128
Query: 1856 LQTLQSQVQQICNE--------SAKLQASY---AGEKAKEITNREAEVV 1893
+ ++ + + S ++ A+Y G KA++ E +
Sbjct: 129 IAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFI 177
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus
norvegicus} SCOP: a.87.1.1 b.55.1.1
Length = 402
Score = 30.6 bits (69), Expect = 6.5
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 2231 KHVFRVKADNGAE-YLFQAKNDEEMNKWVTALSNVCEQQASGGPSSRSQTLPAAEMRKDE 2289
K+ F++ E +LF AK EE +W+ A + +
Sbjct: 327 KNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQEDEKIGFEISENQKRQAAMT 386
Query: 2290 PKRRSFFTLKKS 2301
++ S + +
Sbjct: 387 VRKASKQKVTQR 398
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus
thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A*
1set_A* 1sry_A
Length = 421
Score = 30.6 bits (70), Expect = 6.5
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 985 EMDLTGIMTL--QRRLSGMERDLAAIQAKLDSLEAE----AVAIEKEHPEEAEAIRERIK 1038
+DL ++ L + + ++ +L ++ E A + K PEE EA+ R K
Sbjct: 24 ALDLEALLALDREVQ---------ELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGK 74
Query: 1039 QIRIIWEQLTQMLKERDAKLEEA 1061
+ ++L + L+E++A+LE
Sbjct: 75 ALGEEAKRLEEALREKEARLEAL 97
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA,
national project on structural and functional analyses;
2.61A {Homo sapiens} SCOP: a.238.1.4
Length = 305
Score = 30.4 bits (68), Expect = 6.9
Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 5/160 (3%)
Query: 1019 AVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQVWL 1078
+ + + + + +KQ R + ++ + + + + D +
Sbjct: 96 SENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADR 155
Query: 1079 TKTQTDVASEDTPSSLADAEKLLNQHQAIREEIDNYTEDYKKMMDYGEKVTAEPSTHDDP 1138
+ + D + AD EK Q Q + ++ DY ++ E P
Sbjct: 156 AQQYFEKMDADINVTKADVEKARQQAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIP 215
Query: 1139 QYM-----FLRERLKALRDGWEELHKMWENRQQLLSQSLN 1173
R+ + + + ++ ++ + L+
Sbjct: 216 NIFQKIQEMEERRIVRMGESMKTYAEVDRQVIPIIGKCLD 255
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 127
Score = 28.9 bits (64), Expect = 7.5
Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 24/127 (18%)
Query: 2157 MEGTLVRKHEWEAIAKRASNRSWDKIFVSLRGTLLYFYKDQKSAKSSPEIYYKNETPFEL 2216
+G L + + + + W + SL Y A + E+ E P
Sbjct: 14 KQGFLYLQQQ------QTFGKKWRRFGASL-------YGGSDCALARLELQEGPEKPRRC 60
Query: 2217 RGGS-----------AQVADDYSKKKHVFRVKADNGAEYLFQAKNDEEMNKWVTALSNVC 2265
A+ + S + + A E WV A+ +
Sbjct: 61 EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQAICLLA 120
Query: 2266 EQQASGG 2272
S G
Sbjct: 121 FSGPSSG 127
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 30.6 bits (68), Expect = 7.8
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 2060 KKHEAFEKSAIAQEERFSALERLTTFELKELNKRKEEEERK-------RQEELAAKQTPP 2112
K H+ E L R + E ++ + ERK R E+
Sbjct: 315 KIHKKNESKRRNFVYSEYKLHRYLKYLNDEFSRTRSFVERKLAFTANERMAEMDILTQKY 374
Query: 2113 TSPDQSAKDRLDGEEVKDKEKEGESRQE 2140
+P + ++ E+V ++++G+ ++E
Sbjct: 375 EAPAYDSTEKEGAEQVDGEQRDGQLQEE 402
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A
{Drosophila melanogaster}
Length = 290
Score = 30.1 bits (67), Expect = 7.8
Identities = 24/211 (11%), Positives = 71/211 (33%), Gaps = 11/211 (5%)
Query: 1471 FEKIKEPLLARQRALEKKKEAYQFRRDIEDE------KLWIAEKLPSAKSTEYGNSLFNV 1524
+++ + + + ++ Q R DIE K EYG +
Sbjct: 10 YKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAW 69
Query: 1525 HMLKKKNQSLAKEIDNH-EPRINLICNNGRKLIDEGHEDSAEFTSLIEDLMDRWQQLKKA 1583
+ +++ ++ + N + + + E + + +DL D +++ +K
Sbjct: 70 KGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKP 129
Query: 1584 VDERRSKLIQSEKAQQYLFDASEAESWMSEQELYMMVEDRGKDEIS--TQNLMKKHETLE 1641
+ +K+ +++ Y S +++ D++ + K + ++
Sbjct: 130 WAKLLAKVEKAKAD--YHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQ 187
Query: 1642 LAVEDYADTIRQLGETARQLTSEMHPESDQI 1672
E Y I ++ + +M ++
Sbjct: 188 KCREKYEQAIAEITKYNSVYIEDMTSVFEKC 218
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; HET: SSA; 2.60A {Pyrococcus
horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Length = 455
Score = 30.3 bits (69), Expect = 8.0
Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 1007 AIQAKLDSLEAE------AVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEE 1060
+++ L E + ++ E + + + ++I +L ++E K++
Sbjct: 42 TKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDY 101
Query: 1061 A 1061
Sbjct: 102 Y 102
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite,
transferase; 1.75A {Leishmania major} PDB: 2hfu_A*
Length = 332
Score = 30.1 bits (68), Expect = 8.3
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 1008 IQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQLTQMLKERDAKLEEAGDL--- 1064
I A + + ++++ P + + + + I Q + L++ D L+ G L
Sbjct: 197 INASTAKVVNDVHKMKQQQPVQFKRLYDNYTHIV---SQAREALQKGD--LQRLGQLMNA 251
Query: 1065 -HRFLRDL 1071
H R +
Sbjct: 252 NHDLCRQI 259
>2zb9_A Putative transcriptional regulator; transcription regulator, TETR
family, helix-turn-helix, DNA- binding, transcription
regulation; 2.25A {Streptomyces coelicolor}
Length = 214
Score = 29.9 bits (68), Expect = 8.7
Identities = 14/85 (16%), Positives = 22/85 (25%), Gaps = 14/85 (16%)
Query: 981 TDSLEMDLTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQI 1040
T + DL + + + L A + A A R+
Sbjct: 88 TGDVRADLLAQLRAFTHVMTRTPGGRILTE----LIGAAQT----DADLATAYRQLYSAQ 139
Query: 1041 RIIWEQLTQMLKERDAKLEEAGDLH 1065
R + L R A E G +
Sbjct: 140 RR--ALAAERL--RHA--RELGQIR 158
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus}
SCOP: c.1.15.3 PDB: 1bxc_A
Length = 387
Score = 30.2 bits (67), Expect = 9.1
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 370 KMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLAARF 425
++ A + + + E L++AE E A R E+L+QLA +
Sbjct: 327 ELLAAYYQEDPAALALLGPYSREKAEALKRAELPLE-AKRRRGYALERLDQLAVEY 381
>1y1u_A Signal transducer and activator of transcription; STAT, DNA-binding,
SH2 domain, transcription REGU signaling protein; 3.21A
{Mus musculus}
Length = 585
Score = 30.2 bits (67), Expect = 9.3
Identities = 28/153 (18%), Positives = 50/153 (32%), Gaps = 12/153 (7%)
Query: 929 RQNQLNHDWAGLREKAEGKRDELNSAHGVQ-TFHIECRETVSWIEDKKRILQSTDSLEMD 987
+ Q+N + LR + +EL Q F I+ +E++ ++ Q M
Sbjct: 13 KHLQINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESLRIQAQFAQLGQLNPQERMS 72
Query: 988 LTGIMTLQRRLSGMERDLAAIQAKLDSLEAEAVAIEKEHPEEAEAIRERIKQIRIIWEQL 1047
LQ++ +E L L E ++ + + I L
Sbjct: 73 RET--ALQQKQVSLETWLQREAQTLQQYRVELAEKHQKTLQLLRKQQTII---------L 121
Query: 1048 TQMLKERDAKLEEAGDLHRFLRDLDHFQVWLTK 1080
L + + + AG+ LD Q W K
Sbjct: 122 DDELIQWKRRQQLAGNGGPPEGSLDVLQSWCEK 154
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA
complex, pdzrhogef, guanine nucleotide exchange F RHOA,
signaling protein; 2.84A {Homo sapiens}
Length = 418
Score = 30.3 bits (68), Expect = 9.3
Identities = 26/192 (13%), Positives = 50/192 (26%), Gaps = 37/192 (19%)
Query: 2108 KQTPPTSPD----QSAKDRLDG------EEVKDKEKEG---------ESRQEKQARGERP 2148
K T + + A+D+ E VK E ++ ++A
Sbjct: 223 KHTEGGTSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLA 282
Query: 2149 TSGADADHMEGTLVRKHEWEAIAKRASNRSWDKIFVSL----------RGTLLYFYKDQK 2198
D ++ + + R S + V L + L K
Sbjct: 283 AEFKSLDLTTRKMIHEGP---LTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSK 339
Query: 2199 SAKSSPEIYYKNETPFELRGGSAQVADDYSKKKHVFRVKADNGA---EYLFQAKNDEEMN 2255
+A S + +L + + + K+ F + Y A + N
Sbjct: 340 TAVGSSDSKQTFSPVLKL--NAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKN 397
Query: 2256 KWVTALSNVCEQ 2267
W+ L
Sbjct: 398 TWMELLEEAVRN 409
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding,
kinetoch replication-replication complex; 3.05A
{Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Length = 190
Score = 29.3 bits (65), Expect = 9.7
Identities = 10/78 (12%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 1421 LMQKQQMIETQMAVKAKQVSELETQAEILQKTVPDKMEEIVVKKSAVEQRFEKIKEPLLA 1480
L + ++ Q+ V+ L + +L + + K EI ++++ + + +
Sbjct: 4 LTVYKNSVKQQIDSADLLVANLVNENFVLSEKLDTKATEI----KQLQKQIDSLNAQVKE 59
Query: 1481 RQRALEKKKEAYQFRRDI 1498
+ ++ E + +D+
Sbjct: 60 LKTQTSQQAENSEVIKDL 77
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.130 0.364
Gapped
Lambda K H
0.267 0.0516 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 34,982,275
Number of extensions: 2216746
Number of successful extensions: 7919
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6977
Number of HSP's successfully gapped: 725
Length of query: 2301
Length of database: 6,701,793
Length adjustment: 109
Effective length of query: 2192
Effective length of database: 3,658,404
Effective search space: 8019221568
Effective search space used: 8019221568
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.3 bits)