BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1806
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2HJE0|ATGA1_BOVIN Autophagy-related protein 101 OS=Bos taurus GN=ATG101 PE=2 SV=1
Length = 218
Score = 224 bits (571), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 160/244 (65%), Gaps = 26/244 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E + ++ HT+L HRS GKF YK+ E YS+GT+G DVDC+
Sbjct: 1 MNCRSEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKK--EGTYSIGTVGTQDVDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FIDFTYV SS +L++ +RK V +F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIDFTYVRVSSEELDRALRKVVGEFRDALRNSGGDGL------GQMSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W V++ ++ L EQER++ EK+ L +++I I +VMNR++Y+P +P +S
Sbjct: 113 SDECIPWEVWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDT RD+QPYL+KI F +++ G SSV +++ IKD
Sbjct: 173 EVDNVFDTGLRDVQPYLYKISF--------------QITDALG----SSVTTTMRRLIKD 214
Query: 241 TLLF 244
TL
Sbjct: 215 TLAL 218
>sp|Q9BSB4|ATGA1_HUMAN Autophagy-related protein 101 OS=Homo sapiens GN=ATG101 PE=1 SV=1
Length = 218
Score = 224 bits (570), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 160/242 (66%), Gaps = 26/242 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E + ++ HT+L HRS GKF YK+ E YS+GT+G DVDC+
Sbjct: 1 MNCRSEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKK--EGTYSIGTVGTQDVDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FIDFTYV SS +L++ +RK V +F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIDFTYVRVSSEELDRALRKVVGEFKDALRNSGGDGL------GQMSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W V++ ++ L EQER++ EK+ L +++I I +VMNR++Y+P +P +S
Sbjct: 113 SDECIPWEVWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDT RD+QPYL+KI F +++ G +SV +++ IKD
Sbjct: 173 EVDNVFDTGLRDVQPYLYKISF--------------QITDALG----TSVTTTMRRLIKD 214
Query: 241 TL 242
TL
Sbjct: 215 TL 216
>sp|A4IH75|ATGA1_XENTR Autophagy-related protein 101 OS=Xenopus tropicalis GN=atg101 PE=2
SV=1
Length = 218
Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 161/244 (65%), Gaps = 26/244 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E V ++ HTIL HRS GKF YK+ E YS+GT+G D+DC+
Sbjct: 1 MNCRSEVLEVSVEGRQVEEAVLAVLHTILLHRSTGKFHYKK--EGTYSIGTVGTQDIDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FI+FTYV SS +L++ + K V++F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIEFTYVRVSSEELDRALHKAVSEFKDALRNSGSDGI------GQVSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W +++ ++ L NEQER++ EK+ L +++I I +VMNR++Y+P +P +S
Sbjct: 113 SDECIPWEVWTIKVNVVSLANEQERQICREKVGEKLGEKIINIVEVMNRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDTS +D+QPYL+KI Y + D + +SV +++ IKD
Sbjct: 173 EVDNVFDTSLKDVQPYLYKI------SYQITD------------SLGTSVTTTMRRLIKD 214
Query: 241 TLLF 244
TL
Sbjct: 215 TLAL 218
>sp|Q6AY69|ATGA1_RAT Autophagy-related protein 101 OS=Rattus norvegicus GN=Atg101 PE=2
SV=1
Length = 218
Score = 223 bits (568), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 159/242 (65%), Gaps = 26/242 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E + ++ HT+L HRS GKF YK+ E YS+GT+G DVDC+
Sbjct: 1 MNCRSEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKK--EGTYSIGTVGIQDVDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FIDFTYV SS +L++ +RK V +F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIDFTYVRVSSEELDRALRKVVGEFKDALRNSGGDGL------GQMSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W V++ ++ L EQER++ EK+ L +++I I +VM+R++Y+P +P +S
Sbjct: 113 SDECIPWEVWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMSRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
ELD +FDT RD+QPYL+KI F + EA +SV +++ IKD
Sbjct: 173 ELDNVFDTGLRDVQPYLYKISF-------QITEAL-----------GTSVTTTMRRLIKD 214
Query: 241 TL 242
TL
Sbjct: 215 TL 216
>sp|Q6DE58|ATGA1_XENLA Autophagy-related protein 101 OS=Xenopus laevis GN=atg101 PE=2 SV=1
Length = 218
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/244 (42%), Positives = 161/244 (65%), Gaps = 26/244 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E + ++ HTIL HRS GKF YK+ E YS+GT+G D+DC+
Sbjct: 1 MNCRSEILEVSVEGRQVEEAMLAVLHTILLHRSTGKFHYKK--EGTYSIGTVGTQDIDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FI+FTYV SS +L++ + K V++F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIEFTYVRVSSEELDRALHKAVSEFKDALRNSGSDGI------GQVSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W +++ ++ L NEQER++ EK+ L +++I I +VMNR++Y+P +P +S
Sbjct: 113 SDECIPWEVWTIKVNVVSLANEQERQICREKVGEKLGEKIINIVEVMNRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDTS +D+QPYL+KI Y + D + +SV +++ IKD
Sbjct: 173 EVDNVFDTSLKDVQPYLYKI------SYQITD------------SLGTSVTTTMRRLIKD 214
Query: 241 TLLF 244
TL
Sbjct: 215 TLAL 218
>sp|Q9D8Z6|ATGA1_MOUSE Autophagy-related protein 101 OS=Mus musculus GN=Atg101 PE=2 SV=1
Length = 218
Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/242 (43%), Positives = 159/242 (65%), Gaps = 26/242 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q++E + ++ HT+L HRS GKF YK+ E YS+GT+G DVDC+
Sbjct: 1 MNCRSEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKK--EGTYSIGTVGIQDVDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FIDFTYV SS +L++ +RK V +F + LRN+ + GQ+SLEF++K K WPF
Sbjct: 59 FIDFTYVRVSSEELDRALRKVVGEFKDALRNSGGDGL------GQMSLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W V++ ++ L EQER++ EK+ L +++I I +VM+R++Y+P +P +S
Sbjct: 113 SDECIPWEVWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMSRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDT RD+QPYL+KI F + EA +SV +++ IKD
Sbjct: 173 EVDNVFDTGLRDVQPYLYKISF-------QITEAL-----------GTSVTTTMRRLIKD 214
Query: 241 TL 242
TL
Sbjct: 215 TL 216
>sp|Q3B736|ATGA1_DANRE Autophagy-related protein 101 OS=Danio rerio GN=atg101 PE=2 SV=1
Length = 218
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 161/244 (65%), Gaps = 26/244 (10%)
Query: 1 MNARSQTFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCN 60
MN RS+ E+++EG Q+DE + + HTIL HRS GKF YK+ E YS+GT+G DVDC+
Sbjct: 1 MNCRSEVLEVSVEGRQVDEAMLGLLHTILLHRSTGKFHYKK--EGTYSIGTVGTQDVDCD 58
Query: 61 FIDFTYVCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPF 120
FIDFT+V SS +L++ +RK V +F + L N S + GQISLEF++K K WPF
Sbjct: 59 FIDFTFVRVSSDELDRVIRKAVAEFKDALGN------SGSDGMGQISLEFYQKKKSRWPF 112
Query: 121 NEICIPWELWNVRLELIKLNNEQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIPIKS 180
++ CIPWE+W++++ ++ L NEQER++ EK+ L ++VI I +V+NR++Y+P +P +S
Sbjct: 113 SDECIPWEVWSIKVNVVNLANEQERQICREKVGEKLGEKVINIVEVINRHEYLPKMPTQS 172
Query: 181 ELDLIFDTSYRDIQPYLFKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKD 240
E+D +FDTS +D+QPYL+KI Y + D + +SV+ +++ IKD
Sbjct: 173 EVDNVFDTSLKDVQPYLYKI------TYQITD------------SLGTSVSTTMRRLIKD 214
Query: 241 TLLF 244
TL
Sbjct: 215 TLAL 218
>sp|O13978|MUG66_SCHPO Meiotically up-regulated gene 66 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug66 PE=1 SV=1
Length = 184
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 26/156 (16%)
Query: 7 TFELTIEGHQIDEVVSSIFHTILFHRSYGKFDYKQNEENKYSVGTLGYNDVDCNFIDFTY 66
T EL I EVV ++ ILFHR + + + +D T
Sbjct: 6 TIELKIGYKYAAEVVKAVLGVILFHRQFSTVPAR-----------------TIDVLDITV 48
Query: 67 VCCSSADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKN-KKHWPFNEICI 125
A+LN+ + +F + +RN +N GQ+ L ++++ KK W I
Sbjct: 49 PTLVGAELNEQLATKAAEFIDTIRNEAGAN-------GQMILLLYERSPKKSWFGKGNTI 101
Query: 126 PWELWNVRLELIKLNNE-QERRLSCEKIVNVLTQQV 160
PWE W + +++ + QE LS E V + Q V
Sbjct: 102 PWEQWILHTTILEEGDSYQESSLSLEAAVEQIVQAV 137
>sp|Q6P5B0|RRP12_MOUSE RRP12-like protein OS=Mus musculus GN=Rrp12 PE=1 SV=1
Length = 1295
Score = 33.1 bits (74), Expect = 1.9, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 190 YRDIQPYL-FKIHFLNSSQYNLVDEACPGVSNPAGHTASSSVAHFVKKTIKDTL 242
Y I+PYL K+H + Y +++E C PA S + +KKT+ D+L
Sbjct: 774 YSTIRPYLESKVHGVQKKAYRVLEEVCASSQGPAARFVQSHLDD-LKKTLLDSL 826
>sp|Q5VT06|CE350_HUMAN Centrosome-associated protein 350 OS=Homo sapiens GN=CEP350 PE=1 SV=1
Length = 3117
Score = 31.6 bits (70), Expect = 5.6, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 142 EQERRLSCEKIVNVLTQQVIYICDVMNRNDYVPNIP-------IKSELDLIFDTS 189
E E++L+ EKI + + +QV D R+D VP++P I +E L FD S
Sbjct: 1559 ENEKKLNGEKIESSIDEQVQTAADDSLRSDSVPSLPDEKDSTSIATEYSLKFDES 1613
>sp|A5CVJ3|MNME_VESOH tRNA modification GTPase MnmE OS=Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA) GN=mnmE PE=3 SV=1
Length = 447
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 51 TLGYNDVDCNFIDFTYVCCSSADLNQTVRKHVNQFSN--ILRNTQDSNVSPNPTSGQISL 108
T+ ++D + +F+ F V C D+ QT+ + + ILR + ++ P +G+ SL
Sbjct: 173 TIDFSDEEIDFLQFDQVKCKIKDIKQTIETILKSATQGIILREGLNVAIAGKPNAGKSSL 232
>sp|Q7A3K7|PGCA_STAAN Phosphoglucomutase OS=Staphylococcus aureus (strain N315) GN=pgcA
PE=1 SV=2
Length = 552
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 17/93 (18%)
Query: 162 YICDVMNRNDYVPNIPIKSELDLIFDTSYRD---IQPYLFKIHFLNSSQYNLVDEAC--- 215
Y+ + N Y+P KS+L ++F + + I P L K LN +Q+NLVD C
Sbjct: 206 YMKHIQNMIGYIP----KSDLQVVFTSLHGTSVPIVPELLK--SLNFNQFNLVDAQCKPD 259
Query: 216 PGVS-----NPAGHTASSSVAHFVKKTIKDTLL 243
P S NP H A K+ D L+
Sbjct: 260 PNFSSVQSANPEDHRAFDQAVELANKSHADLLI 292
>sp|Q99RE2|PGCA_STAAM Phosphoglucomutase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=pgcA PE=1 SV=2
Length = 552
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 17/93 (18%)
Query: 162 YICDVMNRNDYVPNIPIKSELDLIFDTSYRD---IQPYLFKIHFLNSSQYNLVDEAC--- 215
Y+ + N Y+P KS+L ++F + + I P L K LN +Q+NLVD C
Sbjct: 206 YMKHIQNMIGYIP----KSDLQVVFTSLHGTSVPIVPELLK--SLNFNQFNLVDAQCKPD 259
Query: 216 PGVS-----NPAGHTASSSVAHFVKKTIKDTLL 243
P S NP H A K+ D L+
Sbjct: 260 PNFSSVQSANPEDHRAFDQAVELANKSHADLLI 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,575,750
Number of Sequences: 539616
Number of extensions: 3742312
Number of successful extensions: 7889
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7865
Number of HSP's gapped (non-prelim): 18
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)