RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1806
         (244 letters)



>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
           {Escherichia coli [TaxId: 562]}
          Length = 397

 Score = 26.5 bits (57), Expect = 3.8
 Identities = 4/78 (5%), Positives = 17/78 (21%)

Query: 72  ADLNQTVRKHVNQFSNILRNTQDSNVSPNPTSGQISLEFFKKNKKHWPFNEICIPWELWN 131
                 +   +    + +   Q                     K+++P + + +    W 
Sbjct: 73  NCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWE 132

Query: 132 VRLELIKLNNEQERRLSC 149
             + +      +      
Sbjct: 133 NHVAIFAGAGFEVSTYPW 150


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.135    0.411 

Gapped
Lambda     K      H
   0.267   0.0438    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 899,358
Number of extensions: 39887
Number of successful extensions: 77
Number of sequences better than 10.0: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 4
Length of query: 244
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 161
Effective length of database: 1,268,006
Effective search space: 204148966
Effective search space used: 204148966
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.5 bits)