BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18060
(549 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 149/267 (55%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K LE + +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVE 64
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ + E ++ L +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL +G + DFG+ S+ + T++ GT Y+ PE+I
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + R + + TFP V+E +DL+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ +ASQRL+ E+L HP +K N S
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSS 269
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K LE + +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVE 64
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 97
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S + T++ GT Y+ PE+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPEM 178
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S SQN +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQNKESA 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 148/267 (55%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K LE + +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVE 64
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ + E ++ L +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA 124
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL +G + DFG+ S+ + ++ GT Y+ PE+I
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMI 182
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + R + + TFP V+E +DL+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ +ASQRL+ E+L HP +K N S
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSS 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K LE + +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-HQLRREVE 64
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 97
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 182
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 98
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEX 182
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWITANSSKPSNCQNKESA 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 98
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 76
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 194
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 254
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 76
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 110
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 59
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEM 177
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQ 385
LL+ + SQR E+L HP + N S QN +
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKE 274
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 59
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEM 178
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 6/278 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+I
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 85
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 203
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 85
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEM 182
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 98
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 148/274 (54%), Gaps = 6/274 (2%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 174
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI++ LI E+A + ++ L++ K E ++ L +AL Y
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+I R
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
+D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+ LL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 354 KDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
+ SQR E+L HP + N S QN +
Sbjct: 243 HNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 64
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMS 93
L HPNI++ LI E+A +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 148/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + L++ K E ++ L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 182
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFA 90
EIQ HL HPNI++ LI E+A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYA 95
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 150/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 61
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + +FG+ S+ + T++ GT Y+ PE+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEM 179
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 61
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 95
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 147/274 (53%), Gaps = 6/274 (2%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 174
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI++ LI E+A + ++ L++ K E ++ L +AL Y
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+I R
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
+D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+ LL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 354 KDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
+ SQR E+L HP + N S QN +
Sbjct: 243 HNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 64
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 64
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMS 93
L HPNI++ LI E+A +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 149/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + ++ GT Y+ PE+
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEM 178
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 60
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 94
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 148/280 (52%), Gaps = 6/280 (2%)
Query: 111 MEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQE 168
M ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 MGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRRE 61
Query: 169 CEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLI 227
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE 287
+AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + ++ GT Y+ PE
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPE 179
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDL 347
+I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
Query: 348 VKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
+ LL+ + SQR E+L HP + N S QN +
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 1 MEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQE 58
M ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 MGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRRE 61
Query: 59 CEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 147/268 (54%), Gaps = 6/268 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + L++ K E ++ L +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELAN 124
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLXGTLDYLPPEM 182
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 64
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFA 90
EIQ HL HPNI++ LI E+A
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYA 95
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 61
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEM 179
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 61
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 95
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 59
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 119
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+I
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 237
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWITANSS 264
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 59
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 92
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 64
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 124
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+I
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMI 182
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 242
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWITANSS 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 64
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 97
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 6/279 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 85
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEM 203
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDC 387
LL+ + SQR E+L HP + N S QN +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESA 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 85
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 145/267 (54%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + T + GT Y+ PE+I
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 145/263 (55%), Gaps = 6/263 (2%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 174
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 61
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI++ LI E+A + ++ L++ K E ++ L +AL Y
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS RV+HRD+KP+N+LL G + DFG+ S+ + T++ GT Y+ PE+I R
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
+D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+ LL+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 239
Query: 354 KDASQRLSWPELLHHPLVKDNLS 376
+ SQR E+L HP + N S
Sbjct: 240 HNPSQRPMLREVLEHPWITANSS 262
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 64
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 61
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMS 93
L HPNI++ LI E+A +
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLG 90
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 147/268 (54%), Gaps = 6/268 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + +FG+ S+ + T++ GT Y+ PE+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEM 180
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 145/267 (54%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + ++ GT Y+ PE+I
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 6/268 (2%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 169
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 170 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS 228
EIQ HL HPNI++ LI E+A + ++ L++ K E ++ L +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
AL Y HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEM 180
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV 348
I R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQEC 59
+K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREV 62
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
EIQ HL HPNI++ LI E+A +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+I
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLIS 238
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 93
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 6/267 (2%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 170
K ALE ++ +G+G FG V+ A + K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 171 IQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISA 229
IQ HL HPNI++ LI E+A + ++ L++ K E ++ L +A
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L Y HS +V+HRD+KP+N+LL G + DFG+ S+ + ++ GT Y+ PE+I
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R +D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLIS 238
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNLS 376
LL+ + SQR E+L HP + N S
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECE 60
K ALE ++ +G+G FG V+ A + K +ALK++ K+ ++G E L++E E
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-HQLRREVE 60
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITEFAHMS 93
IQ HL HPNI++ LI E+A +
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLG 93
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 143/263 (54%), Gaps = 6/263 (2%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 174
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI++ LI E+A + ++ L++ K E ++ L +AL Y
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS RV+HRD+KP+N+LL G + DFG+ S+ + + GT Y+ PE+I R
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
+D DLWSLG + YE +G PPF+ + + + + TFP V+E +DL+ LL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 354 KDASQRLSWPELLHHPLVKDNLS 376
+ SQR E+L HP + N S
Sbjct: 246 HNPSQRPMLREVLEHPWITANSS 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKH 64
ALE ++ +G+G FG V+ A K +ALK++ K+ ++G E L++E EIQ H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-HQLRREVEIQSH 67
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMS 93
L HPNI++ LI E+A +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLG 96
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 135/251 (53%), Gaps = 9/251 (3%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+GEGS+G V+KAIH + + VA+K + +L + +E I + P+++K+ S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKK-LSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ + ++ E+ S+S+++ R K L+E IL + + L YLH R +HRD+K
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLG 304
N+LLN +G A L DFG A + + GTP +MAPE+I E Y+ AD+WSLG
Sbjct: 153 AGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 305 CIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTF--PSQVSETYKDLVKGLLEKDASQRLS 361
A E+ G PP+ + + I ++ T TF P S+ + D VK L K QR +
Sbjct: 213 ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272
Query: 362 WPELLHHPLVK 372
+LL HP V+
Sbjct: 273 ATQLLQHPFVR 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+GEGS+G V+KAIH + + VA+K + +L + +E I + P+++K+ S
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 77 HETLNEFVLITEF 89
+ + ++ E+
Sbjct: 93 YFKNTDLWIVMEY 105
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 137/261 (52%), Gaps = 12/261 (4%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 181 IKFIASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+K + + N ++ EF + +LE + L+E+ + + AL YLH N++
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-----AERP 293
+HRDLK N+L DG L DFG + S GTP +MAPE++ +RP
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLVKG 350
YD+ AD+WSLG E+ PP ++ + L+++ K++ T PS+ S +KD +K
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 351 LLEKDASQRLSWPELLHHPLV 371
LEK+ R + +LL HP V
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 71 IKFIASHETLNEFVLITEF 89
+K + + N ++ EF
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 145/268 (54%), Gaps = 10/268 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 179 NIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+K E + F ++ E + L + + +RK+ SE +I+ + S + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 238 VLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
++HRDLKP+N+LL KD + DFG + T M I GT Y+APE++ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGTY 199
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKG 350
D D+WS G I Y + G PPF + +++ ++T F +S+ KDL++
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 351 LLEKDASQRLSWPELLHHPLVKDNLSSE 378
+L S R++ + L HP ++ S E
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSSEE 287
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 69 NIIKFIASHETLNEFVLITE 88
NI+K E + F ++ E
Sbjct: 82 NIMKLFEILEDSSSFYIVGE 101
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 137/261 (52%), Gaps = 12/261 (4%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 181 IKFIASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+K + + N ++ EF + +LE + L+E+ + + AL YLH N++
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-----AERP 293
+HRDLK N+L DG L DFG + S GTP +MAPE++ +RP
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLVKG 350
YD+ AD+WSLG E+ PP ++ + L+++ K++ T PS+ S +KD +K
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 351 LLEKDASQRLSWPELLHHPLV 371
LEK+ R + +LL HP V
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 71 IKFIASHETLNEFVLITEF 89
+K + + N ++ EF
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 143/262 (54%), Gaps = 10/262 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 179 NIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+K E + F ++ E + L + + +RK+ SE +I+ + S + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 238 VLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
++HRDLKP+N+LL KD + DFG + T M I GT Y+APE++ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGTY 199
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKG 350
D D+WS G I Y + G PPF + +++ ++T F +S+ KDL++
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 351 LLEKDASQRLSWPELLHHPLVK 372
+L S R++ + L HP ++
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQ 281
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 69 NIIKFIASHETLNEFVLITE 88
NI+K E + F ++ E
Sbjct: 82 NIMKLFEILEDSSSFYIVGE 101
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 143/262 (54%), Gaps = 10/262 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 179 NIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+K E + F ++ E + L + + +RK+ SE +I+ + S + Y+H +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 238 VLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
++HRDLKP+N+LL KD + DFG + T M I GT Y+APE++ Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIAPEVL-RGTY 199
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKG 350
D D+WS G I Y + G PPF + +++ ++T F +S+ KDL++
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 351 LLEKDASQRLSWPELLHHPLVK 372
+L S R++ + L HP ++
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQ 281
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+Y +C++G+GSFG+V K ++ A+K+I+K+ K+ S++ +E E+ K L HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 69 NIIKFIASHETLNEFVLITE 88
NI+K E + F ++ E
Sbjct: 82 NIMKLFEILEDSSSFYIVGE 101
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 12/261 (4%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 181 IKFIASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+K + + N ++ EF + +LE + L+E+ + + AL YLH N++
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-----AERP 293
+HRDLK N+L DG L DFG + GTP +MAPE++ +RP
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLVKG 350
YD+ AD+WSLG E+ PP ++ + L+++ K++ T PS+ S +KD +K
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 351 LLEKDASQRLSWPELLHHPLV 371
LEK+ R + +LL HP V
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
++ I +G+G+FGKV+KA + + A K+I +S +EL E +I HPNI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNI 96
Query: 71 IKFIASHETLNEFVLITEF 89
+K + + N ++ EF
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 135/269 (50%), Gaps = 6/269 (2%)
Query: 109 VKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLK 166
+M K ++ + + +G+G FG V+ A K +ALK++ KS + G E L+
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 62
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSN 225
+E EIQ HL HPNI++ L+ EFA L L++ + E +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
L AL+Y H +V+HRD+KP+N+L+ G + DFG+ S+ + + GT Y+
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLP 180
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + +D DLW G + YE +G PPF + S R + D+ FP +S+ K
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK 240
Query: 346 DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ LL QRL ++ HP VK N
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 1 MEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQE 58
M K ++ + + +G+G FG V+ A K +ALK++ KS + G E L++E
Sbjct: 6 MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 64
Query: 59 CEIQKHLAHPNIIKFIASHETLNEFVLITEFA 90
EIQ HL HPNI++ L+ EFA
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 14/258 (5%)
Query: 126 LIGE-GSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+IGE G FGKV+KA + + A K+I +S +EL E +I HPNI+K +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 185 ASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
+ N ++ EF + +LE + L+E+ + + AL YLH N+++HRD
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 243 LKPQNVLLNKDGVAMLCDFGF-ARSMAVGTHMLTSIKGTPLYMAPELI-----AERPYDH 296
LK N+L DG L DFG A++ S GTP +MAPE++ +RPYD+
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 297 TADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLVKGLLE 353
AD+WSLG E+ PP ++ + L+++ K++ T PS+ S +KD +K LE
Sbjct: 194 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 253
Query: 354 KDASQRLSWPELLHHPLV 371
K+ R + +LL HP V
Sbjct: 254 KNVDARWTTSQLLQHPFV 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 16 LIGE-GSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+IGE G FGKV+KA + + A K+I +S +EL E +I HPNI+K +
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDT--KSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 75 ASHETLNEFVLITEF 89
+ N ++ EF
Sbjct: 74 DAFYYENNLWILIEF 88
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 144/267 (53%), Gaps = 18/267 (6%)
Query: 119 EKYQKICLIGEGSFGKVF----KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
E YQ++ +G G++G+V K H++ A+KII K+ S S L +E + K
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVER----AIKIIRKTSVSTSSNSKLLEEVAVLKL 92
Query: 175 LAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI+K E + L+ E + L + + R K +E I+ ++S + YL
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152
Query: 234 HSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
H + ++HRDLKP+N+LL KD + + DFG + M + GT Y+APE++
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-GTAYYIAPEVLR 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKD 346
++ YD D+WS+G I + + G+PPF + ++R ++ TF S VSE KD
Sbjct: 212 KK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 347 LVKGLLEKDASQRLSWPELLHHPLVKD 373
L+K +L+ D+ +R+S + L HP +K+
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIKE 297
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 9 EKYQKICLIGEGSFGKVF----KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 64
E YQ++ +G G++G+V K H++ A+KII K+ S S L +E + K
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVER----AIKIIRKTSVSTSSNSKLLEEVAVLKL 92
Query: 65 LAHPNIIKFIASHETLNEFVLITE 88
L HPNI+K E + L+ E
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVME 116
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 6/269 (2%)
Query: 109 VKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLK 166
+M K ++ + +G+G FG V+ A K +ALK++ KS + G E L+
Sbjct: 5 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 63
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSN 225
+E EIQ HL HPNI++ L+ EFA L L++ + E +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 123
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
L AL+Y H +V+HRD+KP+N+L+ G + DFG+ S+ + + GT Y+
Sbjct: 124 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLP 181
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + +D DLW G + YE +G PPF + S R + D+ FP +S+ K
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK 241
Query: 346 DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ LL QRL ++ HP VK N
Sbjct: 242 DLISKLLRYHPPQRLPLKGVMEHPWVKAN 270
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 1 MEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQE 58
M K ++ + +G+G FG V+ A K +ALK++ KS + G E L++E
Sbjct: 7 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 65
Query: 59 CEIQKHLAHPNIIKFIASHETLNEFVLITEFA 90
EIQ HL HPNI++ L+ EFA
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 97
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 6/269 (2%)
Query: 109 VKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLK 166
+M K ++ + +G+G FG V+ A K +ALK++ KS + G E L+
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLR 62
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSN 225
+E EIQ HL HPNI++ L+ EFA L L++ + E +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE 122
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
L AL+Y H +V+HRD+KP+N+L+ G + DFG+ S+ + + GT Y+
Sbjct: 123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--SVHAPSLRRRXMCGTLDYLP 180
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + +D DLW G + YE +G PPF + S R + D+ FP +S+ K
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK 240
Query: 346 DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ LL QRL ++ HP VK N
Sbjct: 241 DLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 1 MEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQE 58
M K ++ + +G+G FG V+ A K +ALK++ KS + G E L++E
Sbjct: 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRRE 64
Query: 59 CEIQKHLAHPNIIKFIASHETLNEFVLITEFA 90
EIQ HL HPNI++ L+ EFA
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 144/254 (56%), Gaps = 10/254 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E+ LI + + L + + ++ +E +++ ++ A+ YLH ++HRDLK
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 245 PQNVL---LNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLW 301
P+N+L L++D M+ DFG ++ G+ +L++ GTP Y+APE++A++PY D W
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKMEDPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ---DVTFPSQVSETYKDLVKGLLEKDAS 357
S+G IAY + G+PPF + L ++LK + D + +S++ KD ++ L+EKD
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 358 QRLSWPELLHHPLV 371
+R + + L HP +
Sbjct: 263 KRFTCEQALQHPWI 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 76 SHETLNEFVLITEF 89
+E+ LI +
Sbjct: 84 IYESGGHLYLIMQL 97
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 144/254 (56%), Gaps = 10/254 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E+ LI + + L + + ++ +E +++ ++ A+ YLH ++HRDLK
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 245 PQNVL---LNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLW 301
P+N+L L++D M+ DFG ++ G+ +L++ GTP Y+APE++A++PY D W
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKMEDPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ---DVTFPSQVSETYKDLVKGLLEKDAS 357
S+G IAY + G+PPF + L ++LK + D + +S++ KD ++ L+EKD
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 358 QRLSWPELLHHPLV 371
+R + + L HP +
Sbjct: 263 KRFTCEQALQHPWI 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 76 SHETLNEFVLITEF 89
+E+ LI +
Sbjct: 84 IYESGGHLYLIMQL 97
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 146/259 (56%), Gaps = 10/259 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E+ LI + + L + + ++ +E +++ ++ A+ YLH ++HRDLK
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 245 PQNVL---LNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLW 301
P+N+L L++D M+ DFG ++ G+ +L++ GTP Y+APE++A++PY D W
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKMEDPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ---DVTFPSQVSETYKDLVKGLLEKDAS 357
S+G IAY + G+PPF + L ++LK + D + +S++ KD ++ L+EKD
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 358 QRLSWPELLHHPLVKDNLS 376
+R + + L HP + + +
Sbjct: 263 KRFTCEQALQHPWIAGDTA 281
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 76 SHETLNEFVLITEF 89
+E+ LI +
Sbjct: 84 IYESGGHLYLIMQL 97
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 140/258 (54%), Gaps = 7/258 (2%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+ ++ S+ +E ++ E+ A SL++++ + + E + + AL +LHSN+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
V+HRD+K N+LL DG L DFGF + + + GTP +MAPE++ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 298 ADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG +A E+ G PP+ + L+LI T ++ P ++S ++D + LE
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 256
Query: 355 DASQRLSWPELLHHPLVK 372
D +R S ELL H +K
Sbjct: 257 DVEKRGSAKELLQHQFLK 274
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ ++ S+ +E ++ E+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEY 98
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 144/254 (56%), Gaps = 10/254 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E+ LI + + L + + ++ +E +++ ++ A+ YLH ++HRDLK
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143
Query: 245 PQNVL---LNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLW 301
P+N+L L++D M+ DFG ++ G+ +L++ GTP Y+APE++A++PY D W
Sbjct: 144 PENLLYYSLDEDSKIMISDFGLSKMEDPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCW 202
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ---DVTFPSQVSETYKDLVKGLLEKDAS 357
S+G IAY + G+PPF + L ++LK + D + +S++ KD ++ L+EKD
Sbjct: 203 SIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 358 QRLSWPELLHHPLV 371
+R + + L HP +
Sbjct: 263 KRFTCEQALQHPWI 276
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G G+F +V A +K VA+K I+K GKE S++ E + + HPNI+
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVLHKIKHPNIVALDD 83
Query: 76 SHETLNEFVLITEF 89
+E+ LI +
Sbjct: 84 IYESGGHLYLIMQL 97
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 141/258 (54%), Gaps = 7/258 (2%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+ ++ S+ +E ++ E+ A SL++++ + + E + + AL +LHSN+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
V+HRD+K N+LL DG L DFGF + +++ GTP +MAPE++ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 298 ADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG +A E+ G PP+ + L+LI T ++ P ++S ++D + L+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 355 DASQRLSWPELLHHPLVK 372
D +R S ELL H +K
Sbjct: 257 DVEKRGSAKELLQHQFLK 274
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ ++ S+ +E ++ E+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEY 98
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 130/257 (50%), Gaps = 8/257 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+V+K I K+ VA+KII E+ ++QE + P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 77
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
I ++ S+ + +I E+ + L + L ET IL ++ L YLHS R
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTA 298
+HRD+K NVLL++ G L DFG A + GTP +MAPE+I + YD A
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLL----KTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG A E+ G PP S LH +R+L K T Q S+ +K+ V+ L K
Sbjct: 198 DIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNK 254
Query: 355 DASQRLSWPELLHHPLV 371
D R + ELL H +
Sbjct: 255 DPRFRPTAKELLKHKFI 271
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E + K+ IG+GSFG+V+K I K+ VA+KII + E+ ++QE + P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSP 77
Query: 69 NIIKFIASHETLNEFVLITEF 89
I ++ S+ + +I E+
Sbjct: 78 YITRYFGSYLKSTKLWIIMEY 98
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 17/302 (5%)
Query: 98 GEPWFHNHCQPVKMEKSNGAL--EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS 155
G P H H P + + A+ ++Y+ ++G+GSFG+V + A+K+ISK
Sbjct: 26 GGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 85
Query: 156 GRSGK-ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKK 213
K + SL +E ++ K L HPNI+K E F L+ E + L + + RK+
Sbjct: 86 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 145
Query: 214 LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVG 270
SE +I+ ++S + Y+H N+++HRDLKP+N+LL +KD + DFG +
Sbjct: 146 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 205
Query: 271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK 330
M I GT Y+APE++ YD D+WS G I Y + G PPF + +++ ++
Sbjct: 206 KKMKDKI-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 263
Query: 331 TQDVTFP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV----KDNLSSEIESQ 382
TF +VSE+ KDL++ +L S R+S + L H + K+ +S ++ S
Sbjct: 264 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 323
Query: 383 NN 384
+N
Sbjct: 324 DN 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 67
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 68 PNIIKFIASHETLNEFVLITE 88
PNI+K E F L+ E
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGE 129
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 140/258 (54%), Gaps = 7/258 (2%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+ ++ S+ +E ++ E+ A SL++++ + + E + + AL +LHSN+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
V+HRD+K N+LL DG L DFGF + + + GTP +MAPE++ + Y
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 298 ADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG +A E+ G PP+ + L+LI T ++ P ++S ++D + LE
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 355 DASQRLSWPELLHHPLVK 372
D +R S EL+ H +K
Sbjct: 258 DVEKRGSAKELIQHQFLK 275
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ ++ S+ +E ++ E+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEY 99
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 17/302 (5%)
Query: 98 GEPWFHNHCQPVKMEKSNGAL--EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS 155
G P H H P + + A+ ++Y+ ++G+GSFG+V + A+K+ISK
Sbjct: 27 GGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 86
Query: 156 GRSGK-ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKK 213
K + SL +E ++ K L HPNI+K E F L+ E + L + + RK+
Sbjct: 87 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 146
Query: 214 LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVG 270
SE +I+ ++S + Y+H N+++HRDLKP+N+LL +KD + DFG +
Sbjct: 147 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 206
Query: 271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK 330
M I GT Y+APE++ YD D+WS G I Y + G PPF + +++ ++
Sbjct: 207 KKMKDKI-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 264
Query: 331 TQDVTFP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV----KDNLSSEIESQ 382
TF +VSE+ KDL++ +L S R+S + L H + K+ +S ++ S
Sbjct: 265 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSL 324
Query: 383 NN 384
+N
Sbjct: 325 DN 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 67
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 68 PNIIKFIASHETLNEFVLITE 88
PNI+K E F L+ E
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGE 130
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 140/258 (54%), Gaps = 7/258 (2%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+ ++ S+ +E ++ E+ A SL++++ + + E + + AL +LHSN+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
V+HRD+K N+LL DG L DFGF + + + GTP +MAPE++ + Y
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 298 ADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG +A E+ G PP+ + L+LI T ++ P ++S ++D + L+
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDM 256
Query: 355 DASQRLSWPELLHHPLVK 372
D +R S ELL H +K
Sbjct: 257 DVEKRGSAKELLQHQFLK 274
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 77
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ ++ S+ +E ++ E+
Sbjct: 78 NIVNYLDSYLVGDELWVVMEY 98
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 142/265 (53%), Gaps = 5/265 (1%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHL 175
+E ++ L+G+GSF V++A + VA+K+I K ++G + ++ E +I L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM-VQRVQNEVKIHCQL 68
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQR-KKLSETICVQILSNLISALYYL 233
HP+I++ E N L+ E H ++ L+ R K SE + +I+ + YL
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+ +LHRDL N+LL ++ + DFG A + + ++ GTP Y++PE+
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA 188
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
+ +D+WSLGC+ Y + +G PPF T ++ + + + D PS +S KDL+ LL
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLR 248
Query: 354 KDASQRLSWPELLHHPLVKDNLSSE 378
++ + RLS +L HP + N S++
Sbjct: 249 RNPADRLSLSSVLDHPFMSRNSSTK 273
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHL 65
+E ++ L+G+GSF V++A + VA+K+I K ++G + ++ E +I L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM-VQRVQNEVKIHCQL 68
Query: 66 AHPNIIKFIASHETLNEFVLITEFAH 91
HP+I++ E N L+ E H
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCH 94
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 141/258 (54%), Gaps = 7/258 (2%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
NI+ ++ S+ +E ++ E+ A SL++++ + + E + + AL +LHSN+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
V+HR++K N+LL DG L DFGF + +++ GTP +MAPE++ + Y
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 298 ADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG +A E+ G PP+ + L+LI T ++ P ++S ++D + LE
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEM 257
Query: 355 DASQRLSWPELLHHPLVK 372
D +R S EL+ H +K
Sbjct: 258 DVEKRGSAKELIQHQFLK 275
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY + IG+G+ G V+ A+ + + VA++ ++ + KEL + E + + +P
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNP 78
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ ++ S+ +E ++ E+
Sbjct: 79 NIVNYLDSYLVGDELWVVMEY 99
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 10/253 (3%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G+F +V A K A+K I K GKE SS++ E + + + H NI+
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDI 88
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+E+ N L+ + + L + + ++ +E ++ ++ A+YYLH ++HRDLKP
Sbjct: 89 YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKP 148
Query: 246 QNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
+N+L +++ M+ DFG ++ G M T+ GTP Y+APE++A++PY D WS
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC-GTPGYVAPEVLAQKPYSKAVDCWS 207
Query: 303 LGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ---DVTFPSQVSETYKDLVKGLLEKDASQ 358
+G IAY + G+PPF + L ++LK + D + +S++ KD ++ L+EKD ++
Sbjct: 208 IGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNK 267
Query: 359 RLSWPELLHHPLV 371
R + + HP +
Sbjct: 268 RYTCEQAARHPWI 280
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G+F +V A K A+K I K GKE SS++ E + + + H NI+
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDI 88
Query: 77 HETLNEFVLITEF 89
+E+ N L+ +
Sbjct: 89 YESPNHLYLVMQL 101
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 142/265 (53%), Gaps = 11/265 (4%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELS-SLKQECEIQKH 174
G ++YQ++ +G G++G+V A+KII KS + S +L E + K
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 175 LAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
L HPNI+K E + L+ E + L + + R+K SE I+ ++S YL
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 234 HSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
H + ++HRDLKP+N+LL ++D + + DFG + VG M + GT Y+APE++
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLR 179
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKD 346
++ YD D+WS G I Y + G+PPF + +++ ++ +F +QVS+ K
Sbjct: 180 KK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQ 238
Query: 347 LVKGLLEKDASQRLSWPELLHHPLV 371
LVK +L + S+R+S E L+HP +
Sbjct: 239 LVKLMLTYEPSKRISAEEALNHPWI 263
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELS-SLKQECEIQKH 64
G ++YQ++ +G G++G+V A+KII KS + S +L E + K
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 65 LAHPNIIKFIASHETLNEFVLITE 88
L HPNI+K E + L+ E
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVME 84
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 154/297 (51%), Gaps = 17/297 (5%)
Query: 103 HNHCQPVKMEKSNGAL--EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK 160
H H P + + A+ ++Y+ ++G+GSFG+V + A+K+ISK K
Sbjct: 8 HLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 67
Query: 161 -ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETI 218
+ SL +E ++ K L HPNI+K E F L+ E + L + + RK+ SE
Sbjct: 68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD 127
Query: 219 CVQILSNLISALYYLHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLT 275
+I+ ++S + Y+H N+++HRDLKP+N+LL +KD + DFG + M
Sbjct: 128 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT 335
I GT Y+APE++ YD D+WS G I Y + G PPF + +++ ++ T
Sbjct: 188 KI-GTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 245
Query: 336 FP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV----KDNLSSEIESQNN 384
F +VSE+ KDL++ +L S R+S + L H + K+ +S ++ S +N
Sbjct: 246 FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDN 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 67
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 68 PNIIKFIASHETLNEFVLITE 88
PNI+K E F L+ E
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGE 106
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 142/266 (53%), Gaps = 11/266 (4%)
Query: 115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELS-SLKQECEIQK 173
G ++YQ++ +G G++G+V A+KII KS + S +L E + K
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 174 HLAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
L HPNI+K E + L+ E + L + + R+K SE I+ ++S Y
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 233 LHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
LH + ++HRDLKP+N+LL ++D + + DFG + VG M + GT Y+APE++
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVL 195
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYK 345
++ YD D+WS G I Y + G+PPF + +++ ++ +F +QVS+ K
Sbjct: 196 RKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAK 254
Query: 346 DLVKGLLEKDASQRLSWPELLHHPLV 371
LVK +L + S+R+S E L+HP +
Sbjct: 255 QLVKLMLTYEPSKRISAEEALNHPWI 280
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELS-SLKQECEIQK 63
G ++YQ++ +G G++G+V A+KII KS + S +L E + K
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 64 HLAHPNIIKFIASHETLNEFVLITE 88
L HPNI+K E + L+ E
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVME 101
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+VFK I +K VA+KII E+ ++QE + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 65
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+ K+ S+ + +I E+ S +LLE L ET IL ++ L YLHS +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK 124
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRD+K NVLL++ G L DFG A + + GTP +MAPE+I + YD
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDA 356
AD+WSLG A E+ G PP + + ++ L+ K T S+ K+ V+ L K+
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 244
Query: 357 SQRLSWPELLHHPLVKDN 374
S R + ELL H + N
Sbjct: 245 SFRPTAKELLKHKFILRN 262
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E + K+ IG+GSFG+VFK I +K VA+KII + E+ ++QE + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSP 65
Query: 69 NIIKFIASHETLNEFVLITEF 89
+ K+ S+ + +I E+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEY 86
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+VFK I +K VA+KII E+ ++QE + P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 85
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+ K+ S+ + +I E+ S +LLE L ET IL ++ L YLHS +
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK 144
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRD+K NVLL++ G L DFG A + + GTP +MAPE+I + YD
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDA 356
AD+WSLG A E+ G PP + + ++ L+ K T S+ K+ V+ L K+
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 264
Query: 357 SQRLSWPELLHHPLVKDN 374
S R + ELL H + N
Sbjct: 265 SFRPTAKELLKHKFILRN 282
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E + K+ IG+GSFG+VFK I +K VA+KII + E+ ++QE + P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSP 85
Query: 69 NIIKFIASHETLNEFVLITEF 89
+ K+ S+ + +I E+
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEY 106
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+VFK I +K VA+KII E+ ++QE + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 80
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+ K+ S+ + +I E+ S +LLE L ET IL ++ L YLHS +
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK 139
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRD+K NVLL++ G L DFG A + GTP +MAPE+I + YD
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDA 356
AD+WSLG A E+ G PP + + ++ L+ K T S+ K+ V+ L K+
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 259
Query: 357 SQRLSWPELLHHPLVKDN 374
S R + ELL H + N
Sbjct: 260 SFRPTAKELLKHKFILRN 277
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E + K+ IG+GSFG+VFK I +K VA+KII + E+ ++QE + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSP 80
Query: 69 NIIKFIASHETLNEFVLITEF 89
+ K+ S+ + +I E+
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEY 101
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 132/251 (52%), Gaps = 6/251 (2%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G FG V+ A VALK++ KS + G E L++E EIQ HL HPNI++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE-HQLRREIEIQAHLHHPNILRLY 89
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
LI E+A L L++ E I+ L AL Y H +V+HRD+
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDI 149
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSL 303
KP+N+LL G + DFG+ S+ + ++ GT Y+ PE+I R ++ DLW +
Sbjct: 150 KPENLLLGLKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCI 207
Query: 304 GCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWP 363
G + YE+ +G+PPF++ S R + D+ FP+ V +DL+ LL + S+RL
Sbjct: 208 GVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRHNPSERLPLA 267
Query: 364 ELLHHPLVKDN 374
++ HP V+ N
Sbjct: 268 QVSAHPWVRAN 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G FG V+ A VALK++ KS + G E L++E EIQ HL HPNI++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE-HQLRREIEIQAHLHHPNILRLY 89
Query: 75 ASHETLNEFVLITEFA 90
LI E+A
Sbjct: 90 NYFYDRRRIYLILEYA 105
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 4/258 (1%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+VFK I +K VA+KII E+ ++QE + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSP 65
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+ K+ S+ + +I E+ S +LLE L ET IL ++ L YLHS +
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEK 124
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRD+K NVLL++ G L DFG A + GTP +MAPE+I + YD
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDA 356
AD+WSLG A E+ G PP + + ++ L+ K T S+ K+ V+ L K+
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEP 244
Query: 357 SQRLSWPELLHHPLVKDN 374
S R + ELL H + N
Sbjct: 245 SFRPTAKELLKHKFILRN 262
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E + K+ IG+GSFG+VFK I +K VA+KII + E+ ++QE + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSP 65
Query: 69 NIIKFIASHETLNEFVLITEF 89
+ K+ S+ + +I E+
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEY 86
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 143/265 (53%), Gaps = 4/265 (1%)
Query: 114 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 171
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 8 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 67
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALY 231
+ L HP+IIK ++ +E +++ E+A L + + QR K+SE + +ISA+
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
Y H ++++HRDLKP+N+LL++ + DFG + M G + TS G+P Y APE+I+
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-GSPNYAAPEVISG 186
Query: 292 RPY-DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y D+WS G I Y + PF SI L + + T P +S L+K
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 246
Query: 351 LLEKDASQRLSWPELLHHPLVKDNL 375
+L + R+S E++ K +L
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFKVDL 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 4 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 61
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 8 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 67
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKY 121
+ L HP+IIK ++ +E +++ E+A G F Q KM + A +
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-------GNELFDYIVQRDKMSEQE-ARRFF 119
Query: 122 QKICLIGEGSFGKVFKAIHLDLK 144
Q+I I + K +H DLK
Sbjct: 120 QQI--ISAVEYCHRHKIVHRDLK 140
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 143/265 (53%), Gaps = 4/265 (1%)
Query: 114 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 171
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 7 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 66
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALY 231
+ L HP+IIK ++ +E +++ E+A L + + QR K+SE + +ISA+
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
Y H ++++HRDLKP+N+LL++ + DFG + M G + TS G+P Y APE+I+
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-GSPNYAAPEVISG 185
Query: 292 RPY-DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y D+WS G I Y + PF SI L + + T P +S L+K
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245
Query: 351 LLEKDASQRLSWPELLHHPLVKDNL 375
+L + R+S E++ K +L
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFKVDL 270
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 4 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 61
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 7 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 66
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKY 121
+ L HP+IIK ++ +E +++ E+A G F Q KM + A +
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-------GNELFDYIVQRDKMSEQE-ARRFF 118
Query: 122 QKICLIGEGSFGKVFKAIHLDLK 144
Q+I I + K +H DLK
Sbjct: 119 QQI--ISAVEYCHRHKIVHRDLK 139
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 143/266 (53%), Gaps = 4/266 (1%)
Query: 114 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 171
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 2 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALY 231
+ L HP+IIK ++ +E +++ E+A L + + QR K+SE + +ISA+
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
Y H ++++HRDLKP+N+LL++ + DFG + M G + TS G+P Y APE+I+
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-GSPNYAAPEVISG 180
Query: 292 RPY-DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y D+WS G I Y + PF SI L + + T P +S L+K
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 240
Query: 351 LLEKDASQRLSWPELLHHPLVKDNLS 376
+L + R+S E++ K +L
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDLP 266
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 4 SNGA-LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEI 61
++GA + YQ + +GEGSFGKV A H + VALKII+K + ++ +++E
Sbjct: 2 ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKY 121
+ L HP+IIK ++ +E +++ E+A G F Q KM + A +
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-------GNELFDYIVQRDKMSEQE-ARRFF 113
Query: 122 QKICLIGEGSFGKVFKAIHLDLK 144
Q+I I + K +H DLK
Sbjct: 114 QQI--ISAVEYCHRHKIVHRDLK 134
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 138/258 (53%), Gaps = 3/258 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAHPN 179
YQ + +GEGSFGKV A H + VALKII+K + ++ +++E + L HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 180 IIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
IIK ++ +E +++ E+A L + + QR K+SE + +ISA+ Y H ++++
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTA 298
HRDLKP+N+LL++ + DFG + M G + TS G+P Y APE+I+ + Y
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 184
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WS G I Y + PF SI L + + T P +S L+K +L +
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLN 244
Query: 359 RLSWPELLHHPLVKDNLS 376
R+S E++ K +L
Sbjct: 245 RISIHEIMQDDWFKVDLP 262
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAHPN 69
YQ + +GEGSFGKV A H + VALKII+K + ++ +++E + L HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 70 IIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGE 129
IIK ++ +E +++ E+A G F Q KM + A +Q+I I
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-------GNELFDYIVQRDKMSEQE-ARRFFQQI--ISA 115
Query: 130 GSFGKVFKAIHLDLK 144
+ K +H DLK
Sbjct: 116 VEYCHRHKIVHRDLK 130
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 141/264 (53%), Gaps = 23/264 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK--SGRSGKELSSLKQECEIQKHLAHPNIIKF- 183
+GEGSF K +H + A+KIISK + KE+++LK CE HPNI+K
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL-CE-----GHPNIVKLH 72
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
H+ L+ F+++ L ++++K SET I+ L+SA+ ++H V+HRDL
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 244 KPQNVLLNKDGVAM---LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADL 300
KP+N+L + + + DFGFAR L + T Y APEL+ + YD + DL
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192
Query: 301 WSLGCIAYEIHMGHPPFKT-------VSILHLIRLLKTQDVTFPSQ----VSETYKDLVK 349
WSLG I Y + G PF++ S + +++ +K D +F + VS+ KDL++
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
GLL D ++RL L ++ ++D
Sbjct: 253 GLLTVDPNKRLKMSGLRYNEWLQD 276
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK--SGRSGKELSSLKQECEIQKHLAHPNIIKF- 73
+GEGSF K +H + A+KIISK + KE+++LK CE HPNI+K
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL-CE-----GHPNIVKLH 72
Query: 74 IASHETLNEFVLI 86
H+ L+ F+++
Sbjct: 73 EVFHDQLHTFLVM 85
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E ++ + +G+G+FGKV+KA + + A K+I +S +EL E EI HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP 76
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSN 236
I+K + ++ + ++ EF + +LE + L+E + ++ AL +LHS
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-----AE 291
R++HRDLK NVL+ +G L DFG + S GTP +MAPE++ +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLV 348
PYD+ AD+WSLG E+ PP ++ + L+++ K+ T PS+ S ++D +
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 256
Query: 349 KGLLEKDASQRLSWPELLHHPLV 371
K L+K+ R S +LL HP V
Sbjct: 257 KIALDKNPETRPSAAQLLEHPFV 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E ++ + +G+G+FGKV+KA + + A K+I +S +EL E EI HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP 76
Query: 69 NIIKFIASHETLNEFVLITEF 89
I+K + ++ + ++ EF
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEF 97
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 92
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 151/299 (50%), Gaps = 13/299 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIA 185
+GEGSFGKV A H ++ VALK IS+ ++ +++E K L HP+IIK
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
T + V++ E+A L + + ++K+++E + +I A+ Y H ++++HRDLKP
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTADLWSLG 304
+N+LL+ + + DFG + M G + TS G+P Y APE+I + Y D+WS G
Sbjct: 137 ENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC-GSPNYAAPEVINGKLYAGPEVDVWSCG 195
Query: 305 CIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPE 364
+ Y + +G PF I +L + + + P +S + L++ ++ D QR++ E
Sbjct: 196 IVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQE 255
Query: 365 LLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRK------SITTIVES-DSDENEE 416
+ P NL + + Y D R S+ S IVE+ SDEN E
Sbjct: 256 IRRDPWFNVNLPDYLRPMEE---VQGSYADSRIVSKLGEAMGFSEDYIVEALRSDENNE 311
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIA 75
+GEGSFGKV A H ++ VALK IS+ ++ +++E K L HP+IIK
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 76 SHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKV 135
T + V++ E+A G F + +M + G Q IC I +
Sbjct: 77 VITTPTDIVMVIEYA-------GGELFDYIVEKKRMTEDEGRRFFQQIICAI---EYCHR 126
Query: 136 FKAIHLDLK 144
K +H DLK
Sbjct: 127 HKIVHRDLK 135
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
Q+ + P ++K S + + ++ E+A + + L + + SE + ++
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
Q+ + P ++K S + + ++ E+A
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYA 124
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E ++ + +G+G+FGKV+KA + + A K+I +S +EL E EI HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP 68
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSN 236
I+K + ++ + ++ EF + +LE + L+E + ++ AL +LHS
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA-----E 291
R++HRDLK NVL+ +G L DFG + S GTP +MAPE++ +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKTQDVTF--PSQVSETYKDLV 348
PYD+ AD+WSLG E+ PP ++ + L+++ K+ T PS+ S ++D +
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 248
Query: 349 KGLLEKDASQRLSWPELLHHPLV 371
K L+K+ R S +LL HP V
Sbjct: 249 KIALDKNPETRPSAAQLLEHPFV 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E ++ + +G+G+FGKV+KA + + A K+I +S +EL E EI HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP 68
Query: 69 NIIKFIASHETLNEFVLITEF 89
I+K + ++ + ++ EF
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEF 89
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 139/263 (52%), Gaps = 11/263 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 177
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 178 PNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
PNI+K E F L+ E + L + + RK+ SE +I+ ++S + Y+H N
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 237 RVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+++HRDLKP+N+LL +KD + DFG + M I GT Y+APE++
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVL-HGT 209
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKDLVK 349
YD D+WS G I Y + G PPF + +++ ++ TF +VSE+ KDL++
Sbjct: 210 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 350 GLLEKDASQRLSWPELLHHPLVK 372
+L S R+S + L H ++
Sbjct: 270 KMLTYVPSMRISARDALDHEWIQ 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 67
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 68 PNIIKFIASHETLNEFVLITE 88
PNI+K E F L+ E
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGE 112
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 145/274 (52%), Gaps = 10/274 (3%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHL 175
+L+ +Q + +G GSFG+V + A+K++ K K++ E + +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP II+ + + + +I ++ L +LL + ++ + + + AL YLH
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S +++RDLKP+N+LL+K+G + DFGFA+ + T+ L GTP Y+APE+++ +PY
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC---GTPDYIAPEVVSTKPY 180
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
+ + D WS G + YE+ G+ PF + + + ++ FP +E KDL+ L+ +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITR 240
Query: 355 DASQRL-----SWPELLHHPLVKDNLSSEIESQN 383
D SQRL ++ +HP K+ + ++ S+N
Sbjct: 241 DLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRN 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ A + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 12/259 (4%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+F +VF K ALK I KS SSL+ E + K + H NI+
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKS--PAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 186 SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E+ + L+ + L + + +R +E ++ ++SA+ YLH N ++HRDLK
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 245 PQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLW 301
P+N+L ++ M+ DFG ++ G ++++ GTP Y+APE++A++PY D W
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCW 191
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKDLVKGLLEKDAS 357
S+G I Y + G+PPF + L +K F S +SE+ KD + LLEKD +
Sbjct: 192 SIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPN 251
Query: 358 QRLSWPELLHHPLVKDNLS 376
+R + + L HP + N +
Sbjct: 252 ERYTCEKALSHPWIDGNTA 270
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G G+F +VF K ALK I KS SSL+ E + K + H NI+
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKS--PAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 76 SHETLNEFVLITE 88
+E+ + L+ +
Sbjct: 74 IYESTTHYYLVMQ 86
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 103 HNHCQPVKMEKSNGAL--EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK 160
H H P + + A+ ++Y+ ++G+GSFG+V + A+K+ISK K
Sbjct: 8 HLHATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK 67
Query: 161 -ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETI 218
+ SL +E ++ K L HPNI K E F L+ E + L + + RK+ SE
Sbjct: 68 TDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD 127
Query: 219 CVQILSNLISALYYLHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLT 275
+I+ ++S + Y H N+++HRDLKP+N+LL +KD + DFG + TH
Sbjct: 128 AARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------THFEA 181
Query: 276 SIK-----GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK 330
S K GT Y+APE++ YD D+WS G I Y + G PPF + +++ ++
Sbjct: 182 SKKXKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 240
Query: 331 TQDVTFP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV----KDNLSSEIESQ 382
TF +VSE+ KDL++ L S R+S + L H + K+ +S ++ S
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSL 300
Query: 383 NN 384
+N
Sbjct: 301 DN 302
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 67
++Y+ ++G+GSFG+V + A+K+ISK K + SL +E ++ K L H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 68 PNIIKFIASHETLNEFVLITE 88
PNI K E F L+ E
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGE 106
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+A + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P ++K S + + ++ E+A
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL 175
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+P+++ F E + ++ E SL L ++RK ++E + I + YLH
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
+NRV+HRDLK N+ LN D + DFG A + ++ GTP Y+APE++ ++ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLGCI Y + +G PPF+T + +K + + P ++ L++ +L
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 355 DASQRLSWPELL 366
D + R S ELL
Sbjct: 280 DPTLRPSVAELL 291
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL 65
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 66 AHPNIIKFIASHETLNEFVLIT 87
+P+++ F E ++FV +
Sbjct: 100 DNPHVVGFHGFFED-DDFVYVV 120
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF M L + ++ + + L L+ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSL 94
HPNI+K + T N+ L+ EF M L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDL 90
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP 141
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP 141
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 98
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I IG GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL 175
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 24 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 83
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+P+++ F E + ++ E SL L ++RK ++E + I + YLH
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
+NRV+HRDLK N+ LN D + DFG A + + GTP Y+APE++ ++ +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLGCI Y + +G PPF+T + +K + + P ++ L++ +L
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 263
Query: 355 DASQRLSWPELL 366
D + R S ELL
Sbjct: 264 DPTLRPSVAELL 275
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL 65
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 24 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 83
Query: 66 AHPNIIKFIASHETLNEFVLIT 87
+P+++ F E ++FV +
Sbjct: 84 DNPHVVGFHGFFED-DDFVYVV 104
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSL 94
HPNI+K + T N+ L+ EF H L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDL 91
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 137/290 (47%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF M L + ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSL 94
HPNI+K + T N+ L+ EF M L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDL 91
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 134/251 (53%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+A + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P ++K S + + ++ E+A
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 94
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 93
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 93
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 94
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 92
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL 175
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+P+++ F E + ++ E SL L ++RK ++E + I + YLH
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
+NRV+HRDLK N+ LN D + DFG A + + GTP Y+APE++ ++ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLGCI Y + +G PPF+T + +K + + P ++ L++ +L
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 355 DASQRLSWPELL 366
D + R S ELL
Sbjct: 280 DPTLRPSVAELL 291
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL 65
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 66 AHPNIIKFIASHETLNEFVLIT 87
+P+++ F E ++FV +
Sbjct: 100 DNPHVVGFHGFFED-DDFVYVV 120
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 95
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 8/260 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E + K+ IG+GSFG+VFK I ++ VA+KII E+ ++QE +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSS 81
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+ K+ S+ ++ +I E+ + L + E +L ++ L YLHS +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTA 298
+HRD+K NVLL++ G L DFG A + + GTP +MAPE+I + YD A
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 201
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLL----KTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLG A E+ G PP S +H +R+L K T ++++K+ + L K
Sbjct: 202 DIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNK 258
Query: 355 DASQRLSWPELLHHPLVKDN 374
D S R + ELL H + N
Sbjct: 259 DPSFRPTAKELLKHKFIVKN 278
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKII 42
E + K+ IG+GSFG+VFK I ++ VA+KII
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII 56
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 80
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 140
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 141 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---GTPEYLAPEIIL 197
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 257
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 258 LLQVDLTKRFG 268
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 80
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 127
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 2/252 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL 175
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+P+++ F E + ++ E SL L ++RK ++E + I + YLH
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
+NRV+HRDLK N+ LN D + DFG A + + GTP Y+APE++ ++ +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D+WSLGCI Y + +G PPF+T + +K + + P ++ L++ +L
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRMLHA 279
Query: 355 DASQRLSWPELL 366
D + R S ELL
Sbjct: 280 DPTLRPSVAELL 291
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL 65
+++Y + +G+G F K ++ +D K+ A K++ KS + + E I K L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 66 AHPNIIKFIASHETLNEFVLIT 87
+P+++ F E ++FV +
Sbjct: 100 DNPHVVGFHGFFED-DDFVYVV 120
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 90
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 98
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 110
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 171 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLC---GTPEYLA 227
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 287
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 288 DLLRNLLQVDLTKRFG 303
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 110
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 162
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 95
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 88 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + ++ GTP Y+APE+++++ + D+WS
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWS 206
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 207 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 266
Query: 363 PELLH 367
ELL+
Sbjct: 267 NELLN 271
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 88 GFFED-NDFVFVV 99
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 84 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + ++ GTP Y+APE+++++ + D+WS
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWS 202
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 203 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 262
Query: 363 PELLH 367
ELL+
Sbjct: 263 NELLN 267
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 84 GFFED-NDFVFVV 95
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 135/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G +E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G +E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 92
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 128/245 (52%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 84 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + ++ GTP Y+APE+++++ + D+WS
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWS 202
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 203 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 262
Query: 363 PELLH 367
ELL+
Sbjct: 263 NELLN 267
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 84 GFFED-NDFVFVV 95
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKP+N+L+N +G L DFG AR+ V T Y APE++
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 92
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 5/246 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLA 176
L+++++I +G GSFG+V H++ A+KI+ K KE+ E I + +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
P ++K S + + ++ E+A + + L + + SE + ++ YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+++RDLKP+N+++++ G + DFG A+ + T L GTP Y+APE+I + Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
D W+LG + YE+ G+PPF + + + + V FPS S KDL++ LL+ D
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
Query: 356 ASQRLS 361
++R
Sbjct: 277 LTKRFG 282
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLA 66
L+++++I +G GSFG+V H++ A+KI+ K KE+ E I + +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
P ++K S + + ++ E+A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYA 123
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P + K S + + ++ E+A + + L + + SE + ++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P + K S + + ++ E+A
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 128 bits (321), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P + K S + + ++ E+A + + L + + SE + ++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P + K S + + ++ E+A
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF H L ++ + + L L+ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKP+N+L+N +G L DFG AR+ V T Y APE++
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 93
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 134/287 (46%), Gaps = 32/287 (11%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSN 236
NI+K + T N+ L+ EF H L ++ + + L L+ L + HS+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDH 296
RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 297 TA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS--------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 342 ---------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 69 NIIKFIASHETLNEFVLITEFAHMSLSKL 97
NI+K + T N+ L+ EF H L K
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKF 90
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 90
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 207
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 268 DLLRNLLQVDLTKRFG 283
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 90
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 142
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+A + + L + + E + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P ++K S + + ++ E+A
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYA 123
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 33/291 (11%)
Query: 115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
G +EKYQK+ +GEG++G V+KA + VALK I S+ +E + K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQI-LSNLISALYYL 233
L HPNI+ I + L+ EF L +L++ K + ++I L L+ + +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAER 292
H +R+LHRDLKPQN+L+N DG L DFG AR+ + T T Y AP+ L+ +
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSE------ 342
Y + D+WS+GCI E+ G P F V+ + + +L T + QV E
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 343 -TYK-------------------DLVKGLLEKDASQRLSWPELLHHPLVKD 373
T++ DL+ +L D ++R+S + ++HP KD
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 64
G +EKYQK+ +GEG++G V+KA + VALK I S+ +E + K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
L HPNI+ I + L+ EF L K+
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKV 108
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 5/246 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLA 176
L+++++I +G GSFG+V H++ A+KI+ K KE+ E I + +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
P ++K S + + ++ E+A + + L + + SE + ++ YLHS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+++RDLKP+N+++++ G + DFG A+ + T L GTP Y+APE+I + Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---GTPEYLAPEIILSKGYN 216
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
D W+LG + YE+ G+PPF + + + + V FPS S KDL++ LL+ D
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVD 276
Query: 356 ASQRLS 361
++R
Sbjct: 277 LTKRFG 282
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLA 66
L+++++I +G GSFG+V H++ A+KI+ K KE+ E I + +
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
P ++K S + + ++ E+A
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYA 123
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+A + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P ++K S + + ++ E+A
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYA 124
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 33/302 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++EKY+ + L+GEGS+G V K + D + VA+K +S +E ++ K L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 177 HPNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHS 235
H N++ + + + L+ EF H L +L L + + L +I+ + + HS
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPY 294
+ ++HRD+KP+N+L+++ GV LCDFGFAR++A + T Y APE L+ + Y
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKT---------------QDVT 335
D+W++GC+ E+ MG P F S + H++ L V
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 336 FP------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQN 383
P ++SE DL K L D +R ELLHH + + +E SQ
Sbjct: 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQE 322
Query: 384 NQ 385
Q
Sbjct: 323 LQ 324
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++EKY+ + L+GEGS+G V K + D + VA+K +S +E ++ K L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
H N++ + + + L+ EF
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFV 106
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 76
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 136
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 137 IVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 193
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 253
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 254 DLLRNLLQVDLTKRFG 269
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 22 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 76
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 128
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 33/291 (11%)
Query: 115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
G +EKYQK+ +GEG++G V+KA + VALK I S+ +E + K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQI-LSNLISALYYL 233
L HPNI+ I + L+ EF L +L++ K + ++I L L+ + +
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAER 292
H +R+LHRDLKPQN+L+N DG L DFG AR+ + T T Y AP+ L+ +
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSE------ 342
Y + D+WS+GCI E+ G P F V+ + + +L T + QV E
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 343 -TYK-------------------DLVKGLLEKDASQRLSWPELLHHPLVKD 373
T++ DL+ +L D ++R+S + ++HP KD
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 64
G +EKYQK+ +GEG++G V+KA + VALK I S+ +E + K
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
L HPNI+ I + L+ EF L K+
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKV 108
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 82 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + + GTP Y+APE+++++ + D+WS
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 200
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 201 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 260
Query: 363 PELLH 367
ELL+
Sbjct: 261 NELLN 265
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 82 GFFED-NDFVFVV 93
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF M L ++ + + L L+ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKP+N+L+N +G L DFG AR+ V T Y APE++
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF M L K
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKF 92
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ EF M L ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKP+N+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF M L K
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKF 94
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 106 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + + GTP Y+APE+++++ + D+WS
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 224
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 225 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 284
Query: 363 PELLH 367
ELL+
Sbjct: 285 NELLN 289
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 106 GFFED-NDFVFVV 117
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 141
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + E + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 142
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + E + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 141
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 115
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 232
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 292
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 293 LLQVDLTKRFG 303
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 115
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 162
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + E + ++
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 211
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 272 LLQVDLTKRFG 282
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 94
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 141
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 185 ASHETLNEFVLIT-EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
E N+FV + E SL L ++RK L+E L ++ YLH NRV+HRD
Sbjct: 108 GFFED-NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LK N+ LN+D + DFG A + + GTP Y+APE+++++ + D+WS
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 226
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW 362
+GCI Y + +G PPF+T + +K + + P ++ L++ +L+ D + R +
Sbjct: 227 IGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTI 286
Query: 363 PELLH 367
ELL+
Sbjct: 287 NELLN 291
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 74
+G+G F K F+ D K+ A KI+ KS + + E I + LAH +++ F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 75 ASHETLNEFVLIT 87
E N+FV +
Sbjct: 108 GFFED-NDFVFVV 119
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 135/289 (46%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ EF H L K
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 87
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + SE + ++
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 204
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 264
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 265 LLQVDLTKRFG 275
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 87
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 134
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 16/283 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 179 NIIKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
NI++ H++++E +++ L + R+ SE + ++ ++ + H
Sbjct: 64 NIVRL---HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 235 SNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
N ++HRDLKP+N+LL +K L DFG A + GTP Y++PE++ +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDL 347
PY D+W+ G I Y + +G+PPF L + +K FPS V+ KDL
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 348 VKGLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+ +L + ++R++ E L HP + + ++S + Q DC+
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 69 NIIKFIASHETLNE 82
NI++ H++++E
Sbjct: 64 NIVRL---HDSISE 74
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 16/283 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 179 NIIKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
NI++ H++++E +++ L + R+ SE + ++ ++ + H
Sbjct: 64 NIVRL---HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 235 SNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
N ++HRDLKP+N+LL +K L DFG A + GTP Y++PE++ +
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDL 347
PY D+W+ G I Y + +G+PPF L + +K FPS V+ KDL
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 348 VKGLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+ +L + ++R++ E L HP + + ++S + Q DC+
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 69 NIIKFIASHETLNE 82
NI++ H++++E
Sbjct: 64 NIVRL---HDSISE 74
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VAL I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VAL I + S+ +E + K L H
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 91
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQ-ILSNLISALYYLHSN 236
NI+K T VL+ E L LL+ + E++ + L L++ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPYD 295
RVLHRDLKPQN+L+N++G + DFG AR+ + T T Y AP+ L+ + Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSETYK------ 345
T D+WS+GCI E+ G P F VS ++ + R+L T + V+E K
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 346 -------------------DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ +L+ D +QR++ + L H K+N
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
NI+K T VL+ E L KL
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKL 89
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VAL I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VAL I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 90
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 20/285 (7%)
Query: 114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ--- 167
++G E Y+ ++G G V + IH K A+KII +G S +E+ L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 168 -ECEIQKHLA-HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILS 224
E +I + ++ HPNII+ ++ET F L+ + L + L ++ LSE +I+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYM 284
L+ + LH ++HRDLKP+N+LL+ D L DFGF+ + G L S+ GTP Y+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLRSVCGTPSYL 190
Query: 285 APELIA-----ERP-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
APE+I P Y D+WS G I Y + G PPF + ++R++ + + F S
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 339 ----QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI 379
S+T KDLV L +R + E L HP + + E+
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ--- 57
++G E Y+ ++G G V + IH K A+KII +G S +E+ L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 58 -ECEIQKHLA-HPNIIKFIASHETLNEFVLI 86
E +I + ++ HPNII+ ++ET F L+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 16/287 (5%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++EKY ++ IGEGSFGK + + +K I+ S S KE ++E + ++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLIS---ALY 231
HPNI+++ S E ++ ++ + Q+ L + QIL + AL
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE--DQILDWFVQICLALK 139
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
++H ++LHRD+K QN+ L KDG L DFG AR + + + GTP Y++PE+
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICEN 199
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS---QVSETYKDLV 348
+PY++ +D+W+LGC+ YE+ F+ S+ +L+ LK +FP S + LV
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV--LKIISGSFPPVSLHYSYDLRSLV 257
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDK 395
L +++ R S +L K ++ IE + I ++C K
Sbjct: 258 SQLFKRNPRDRPSVNSILE----KGFIAKRIEKFLSPQLIAEEFCLK 300
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++EKY ++ IGEGSFGK + + +K I+ S S KE ++E + ++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
HPNI+++ S E ++ ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDY 104
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + +E +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP 141
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQ-ILSNLISALYYLHSN 236
NI+K T VL+ E L LL+ + E++ + L L++ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPYD 295
RVLHRDLKPQN+L+N++G + DFG AR+ + T T Y AP+ L+ + Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSETYK------ 345
T D+WS+GCI E+ G P F VS ++ + R+L T + V+E K
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 346 -------------------DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ +L+ D +QR++ + L H K+N
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
NI+K T VL+ E L KL
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKL 89
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 90
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQ-ILSNLISALYYLHSN 236
NI+K T VL+ E L LL+ + E++ + L L++ + Y H
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPYD 295
RVLHRDLKPQN+L+N++G + DFG AR+ + T T Y AP+ L+ + Y
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSETYK------ 345
T D+WS+GCI E+ G P F VS ++ + R+L T + V+E K
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 346 -------------------DLVKGLLEKDASQRLSWPELLHHPLVKDN 374
DL+ +L+ D +QR++ + L H K+N
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+EKY + IGEG++G V+KA + + +T ALK I S+ +E I K L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
NI+K T VL+ E L KL
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKL 89
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ EF H L ++ + + L L+ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
PNI+K + T N+ L+ EF H L K
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKF 90
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + Y++ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 9/262 (3%)
Query: 108 PVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLK 166
PV E + + ++ + IG+GSFGKV D KK A+K ++K E+ ++
Sbjct: 4 PVFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 167 QECEIQKHLAHPNIIKFIASHETLNE-FVLITEFAHMSLSNLLEQRKKLSETICVQILSN 225
+E +I + L HP ++ S + + F+++ L L+Q E +
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
L+ AL YL + R++HRD+KP N+LL++ G + DF A + T +T++ GT YMA
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMA 182
Query: 286 PELIAERP---YDHTADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQ 339
PE+ + R Y D WSLG AYE+ G P+ + S ++ +T VT+PS
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA 242
Query: 340 VSETYKDLVKGLLEKDASQRLS 361
S+ L+K LLE + QR S
Sbjct: 243 WSQEMVSLLKKLLEPNPDQRFS 264
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECE 60
E + + ++ + IG+GSFGKV D KK A+K ++K E+ ++ +E +
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQ 67
Query: 61 IQKHLAHPNIIKFIASHETLNEFVLITE 88
I + L HP ++ S + + ++ +
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVD 95
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 132/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P + K S + + ++ E+A + + L + + E + ++
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+++++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 212
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 273 LLQVDLTKRFG 283
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H++ A+KI+ K +++ LKQ E I
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 95
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFA 90
+ + P + K S + + ++ E+A
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYA 124
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 136/289 (47%), Gaps = 32/289 (11%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLH 234
HPNI+K + T N+ L+ EF H L + ++ + + L L+ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S+RVLHRDLKP+N+L+N +G L DFG AR+ V T Y APE++ Y
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 295 DHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240
Query: 342 -----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSL 94
HPNI+K + T N+ L+ EF H L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDL 88
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + E +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHS 235
PNI+K + T N+ L+ E H L ++ + + L L+ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+RVLHRDLKPQN+L+N +G L DFG AR+ V T T Y APE++ Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 296 HTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS-------- 341
TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 342 ----------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSL 94
PNI+K + T N+ L+ E H L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDL 87
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + E +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 84
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + E +
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 144
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 145 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 201
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 261
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 262 DLLRNLLQVDLTKRFG 277
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 30 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 84
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 136
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + E +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP 141
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
E + VLI E + L + L +++ L+E Q L ++ ++YLHS R+ H
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF 132
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V L DFG A + G +I GTP ++APE++ P
Sbjct: 133 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D + S SE KD ++ LL
Sbjct: 192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 251
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L H +K
Sbjct: 252 KDPKRRMTIAQSLEHSWIK 270
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 73 FIASHETLNEFVLITEFA 90
E + VLI E
Sbjct: 73 LHDIFENKTDVVLILELV 90
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 110
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + E +
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 170
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 171 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 227
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 287
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 288 DLLRNLLQVDLTKRFG 303
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 110
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF 89
E I + + P ++K S + + ++ E+
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 16/281 (5%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 181 IKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
++ H++++E +++ L + R+ SE + ++ A+ + H
Sbjct: 84 VRL---HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 237 RVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
V+HRDLKP+N+LL K L DFG A + GTP Y++PE++ + P
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVK 349
Y DLW+ G I Y + +G+PPF L + +K FPS V+ KDL+
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 350 GLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+L + S+R++ E L HP + + ++S + Q DC+
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCL 301
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
YQ +G+G+F V + + + + A KII+ S ++ L++E I + L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 71 IKFIASHETLNE 82
++ H++++E
Sbjct: 84 VRL---HDSISE 92
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
P +I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 131/251 (52%), Gaps = 15/251 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 171
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 87
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + P ++K S + + ++ E+ + + L + + E + ++
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+APE+I
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLAPEIIL 204
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+ D W+LG + YE+ G+PPF + + + + V FPS S KDL++
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 264
Query: 351 LLEKDASQRLS 361
LL+ D ++R
Sbjct: 265 LLQVDLTKRFG 275
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ------ECEI 61
L+++++I +G GSFG+V H + A+KI+ K +++ LKQ E I
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-----QKVVKLKQIEHTLNEKRI 87
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
+ + P ++K S + + ++ E F+H+ + + EP
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP 134
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 55/324 (16%)
Query: 111 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 164
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 165 LKQECEIQKHLA---HPNIIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKL-- 214
++ E + +HL HPN+++ ++ + + L+ E L+ L++ +
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 215 -SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM 273
+ETI ++ L+ L +LHS+RV+HRDLKPQN+L+ G L DFG AR +
Sbjct: 118 PTETI-KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMA 175
Query: 274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLI 326
LTS+ T Y APE++ + Y DLWS+GCI E+ P F+ S IL +I
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 327 RLLK----TQDVTFPSQ----------------VSETYKDLVKGLLEKDASQRLSWPELL 366
L +DV P Q + E KDL+ L + ++R+S L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 367 HHPLVKD------NLSSEIESQNN 384
HP +D NL S + N
Sbjct: 296 SHPYFQDLERCKENLDSHLPPSQN 319
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 21/118 (17%)
Query: 1 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 54
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 55 LKQECEIQKHL---AHPNIIKFI---ASHETLNEFVLITEFAHMS------LSKLGEP 100
++ E + +HL HPN+++ T E L F H+ L K+ EP
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
E + VLI E + L + L +++ L+E Q L ++ ++YLHS R+ H
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF 153
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V L DFG A + G +I GTP ++APE++ P
Sbjct: 154 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D + S SE KD ++ LL
Sbjct: 213 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 272
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R+ + L H +K
Sbjct: 273 KDPKRRMXIAQSLEHSWIK 291
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 73 FIASHETLNEFVLITEFA 90
E + VLI E
Sbjct: 94 LHDIFENKTDVVLILELV 111
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 143/285 (50%), Gaps = 20/285 (7%)
Query: 114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ--- 167
++G E Y+ ++G G V + IH K A+KII +G S +E+ L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 168 -ECEIQKHLA-HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILS 224
E +I + ++ HPNII+ ++ET F L+ + L + L ++ LSE +I+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYM 284
L+ + LH ++HRDLKP+N+LL+ D L DFGF+ + G L + GTP Y+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYL 190
Query: 285 APELIA-----ERP-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
APE+I P Y D+WS G I Y + G PPF + ++R++ + + F S
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 250
Query: 339 ----QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI 379
S+T KDLV L +R + E L HP + + E+
Sbjct: 251 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ--- 57
++G E Y+ ++G G V + IH K A+KII +G S +E+ L++
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 58 -ECEIQKHLA-HPNIIKFIASHETLNEFVLI 86
E +I + ++ HPNII+ ++ET F L+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
E + VLI E + L + L +++ L+E Q L ++ ++YLHS R+ H
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF 139
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D + S SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLV 258
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R+ + L H +K
Sbjct: 259 KDPKRRMXIAQSLEHSWIK 277
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK----SGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K K A K I K S R G +++E I + + HPNII
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 73 FIASHETLNEFVLITE 88
E + VLI E
Sbjct: 80 LHDIFENKTDVVLILE 95
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 124/243 (51%), Gaps = 10/243 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG G F +V++A L VALK + K + +E ++ K L HPN+IK+ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 186 SHETLNEFVLITEFAHMS-LSNLLE----QRKKLSETICVQILSNLISALYYLHSNRVLH 240
S NE ++ E A LS +++ Q++ + E + L SAL ++HS RV+H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADL 300
RD+KP NV + GV L D G R + T S+ GTP YM+PE I E Y+ +D+
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 301 WSLGCIAYEIHMGHPPF--KTVSILHLIRLLKTQDV-TFPSQ-VSETYKDLVKGLLEKDA 356
WSLGC+ YE+ PF +++ L + ++ D PS SE + LV + D
Sbjct: 220 WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 357 SQR 359
+R
Sbjct: 280 EKR 282
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG G F +V++A L VALK + K + +E ++ K L HPN+IK+ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 76 SHETLNEFVLITEFA 90
S NE ++ E A
Sbjct: 100 SFIEDNELNIVLELA 114
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP Y+A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEYLA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++
Sbjct: 267 DLLRNLLQVDLTKAFG 282
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 14/258 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + HPNII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E + L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F SQ SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLV 371
K+ +RL+ E L HP +
Sbjct: 259 KETRKRLTIQEALRHPWI 276
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I S++ R G +++E I + + HPNII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 73 FIASHETLNEFVLITEFA 90
+E + VLI E
Sbjct: 80 LHDVYENRTDVVLILELV 97
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 18/302 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ +G+G+F V + + + + A II+ S ++ L++E I + L HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 179 NIIKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
NI++ H++++E +++ L + R+ SE + ++ A+ + H
Sbjct: 71 NIVRL---HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 235 SNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
V+HR+LKP+N+LL K L DFG A + GTP Y++PE++ +
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDL 347
PY DLW+ G I Y + +G+PPF L + +K FPS V+ KDL
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 247
Query: 348 VKGLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCIGFDYCDKRRGSRKSITT 405
+ +L + S+R++ E L HP + + ++S + Q DC+ + RR + +I T
Sbjct: 248 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCL--KKFNARRKLKGAILT 305
Query: 406 IV 407
++
Sbjct: 306 VM 307
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ +G+G+F V + + + + A II+ S ++ L++E I + L HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 69 NIIKFIASHETLNE 82
NI++ H++++E
Sbjct: 71 NIVRL---HDSISE 81
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 167
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 168 -ECEIQKHLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSN 225
E I + + P ++K S + + ++ E+ A + + L + + SE +
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
++ YLHS +++RDLKP+N+L+++ G + DFGFA+ + T L GTP +A
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---GTPEALA 206
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK 345
PE+I + Y+ D W+LG + YE+ G+PPF + + + + V FPS S K
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 346 DLVKGLLEKDASQRLS 361
DL++ LL+ D ++R
Sbjct: 267 DLLRNLLQVDLTKRFG 282
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 19/112 (16%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ----- 57
++ L+++ +I +G GSFG+V H + A+KI+ K +++ LKQ
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-----QKVVKLKQIEHTL 89
Query: 58 -ECEIQKHLAHPNIIKFIASHETLNEFVLITE-------FAHM-SLSKLGEP 100
E I + + P ++K S + + ++ E F+H+ + + EP
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP 141
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 154/307 (50%), Gaps = 49/307 (15%)
Query: 111 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 164
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 165 LKQECEIQKHLA---HPNIIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKL-- 214
++ E + +HL HPN+++ ++ + + L+ E L+ L++ +
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 215 -SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM 273
+ETI ++ L+ L +LHS+RV+HRDLKPQN+L+ G L DFG AR +
Sbjct: 118 PTETI-KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMA 175
Query: 274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLI 326
LTS+ T Y APE++ + Y DLWS+GCI E+ P F+ S IL +I
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 327 RLLK----TQDVTFPSQ----------------VSETYKDLVKGLLEKDASQRLSWPELL 366
L +DV P Q + E KDL+ L + ++R+S L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 367 HHPLVKD 373
HP +D
Sbjct: 296 SHPYFQD 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 21/118 (17%)
Query: 1 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 54
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 55 LKQECEIQKHL---AHPNIIKFI---ASHETLNEFVLITEFAHMS------LSKLGEP 100
++ E + +HL HPN+++ T E L F H+ L K+ EP
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 257 KLLVVDPKARFTTEEALRHPWLQD 280
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 71 IK 72
IK
Sbjct: 78 IK 79
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 257 KLLVVDPKARFTTEEALRHPWLQD 280
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 71 IK 72
IK
Sbjct: 78 IK 79
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 257 KLLVVDPKARFTTEEALRHPWLQD 280
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 71 IK 72
IK
Sbjct: 78 IK 79
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 77 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 136
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 137 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 195
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 255
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 256 KLLVVDPKARFTTEEALRHPWLQD 279
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 71 IK 72
IK
Sbjct: 77 IK 78
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 130/239 (54%), Gaps = 3/239 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHLAHPNIIKF 183
+IG+GSFGKV A H + A+K++ K + +E + + + K++ HP ++
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 184 IASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
S +T ++ + ++ + L L++ + E + + SAL YLHS +++RD
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRD 164
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
LKP+N+LL+ G +L DFG + ++ GTP Y+APE++ ++PYD T D W
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC 224
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
LG + YE+ G PPF + + + + + + ++ + + L++GLL+KD ++RL
Sbjct: 225 LGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLG 283
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHLAHPNIIKF 73
+IG+GSFGKV A H + A+K++ K + +E + + + K++ HP ++
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 74 IASHETLNEFVLITEF 89
S +T ++ + ++
Sbjct: 105 HFSFQTADKLYFVLDY 120
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEI 171
++ + + + L+G+G+FGKV + A+KI+ K K E++ E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 172 QKHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
++ HP + + +T + + E+A+ L L + + +E + ++SAL
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS V++RD+K +N++L+KDG + DFG + + + GTP Y+APE++
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 181
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y D W LG + YE+ G PF L L+ +++ FP +S K L+ G
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAG 241
Query: 351 LLEKDASQRLS 361
LL+KD QRL
Sbjct: 242 LLKKDPKQRLG 252
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 3 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEI 61
++ + + + L+G+G+FGKV + A+KI+ K K E++ E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 62 QKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
++ HP + + +T + + E+A+ GE +FH
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 98
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + + GTP Y+APE++ + Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 355 DASQRLS 361
D QRL
Sbjct: 243 DPKQRLG 249
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 95
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 134/290 (46%), Gaps = 32/290 (11%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYL 233
HPNI+K + T N+ L+ E L ++ + + L L+ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
HS+RVLHRDLKPQN+L+N +G L DFG AR+ V T Y APE++
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 294 YDHTA-DLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQD-VTFPSQVS------ 341
Y TA D+WSLGCI E+ F S + + R L T D V +P S
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 342 ------------------ETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
E + L+ +L D ++R+S L HP +D
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G++E +QK+ IGEG++G V+KA + + VALK I + S+ +E + K L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKL 97
HPNI+K + T N+ L+ E L K
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKF 94
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 84 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 143
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 144 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 202
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 262
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 263 KLLVVDPKARFTTEEALRHPWLQD 286
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA+KIISK S R +++ E EI K L HP I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 71 IK 72
IK
Sbjct: 84 IK 85
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + + GTP Y+APE++ + Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 355 DASQRLS 361
D QRL
Sbjct: 243 DPKQRLG 249
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 95
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA++IISK S R +++ E EI K L HP I
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 217 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 276
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 277 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 335
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 395
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 396 KLLVVDPKARFTTEEALRHPWLQD 419
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA++IISK S R +++ E EI K L HP I
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 71 IK 72
IK
Sbjct: 217 IK 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET LI E+A + + L ++ E ++SA+ Y H R++
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ VG L + G+P Y APEL + YD
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDTFCGSPPYAAPELFQGKKYDGPEV 192
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLL 352
D+WSLG I Y + G PF ++ L + P +S ++L+K L
Sbjct: 193 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET LI E+A
Sbjct: 74 VKLFEVIETEKTLYLIMEYA 93
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + GTP Y+APE++ + Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 355 DASQRLS 361
D QRL
Sbjct: 243 DPKQRLG 249
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 95
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 134/264 (50%), Gaps = 18/264 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 180
+G G+ G+V A K VA++IISK S R +++ E EI K L HP I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 181 IKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
IK + + ++++ L + + K+L E C ++ A+ YLH N ++H
Sbjct: 203 IKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIH 262
Query: 241 RDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL---IAERPY 294
RDLKP+NVLL+ +D + + DFG ++ + T ++ ++ GTP Y+APE+ + Y
Sbjct: 263 RDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGY 321
Query: 295 DHTADLWSLGCIAYEIHMGHPPFK----TVSILHLIRLLKTQDVT-FPSQVSETYKDLVK 349
+ D WSLG I + G+PPF VS+ I K + ++VSE DLVK
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 381
Query: 350 GLLEKDASQRLSWPELLHHPLVKD 373
LL D R + E L HP ++D
Sbjct: 382 KLLVVDPKARFTTEEALRHPWLQD 405
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISK------SGRSGKELSSLKQECEIQKHLAHPNI 70
+G G+ G+V A K VA++IISK S R +++ E EI K L HP I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 71 IK 72
IK
Sbjct: 203 IK 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 124/248 (50%), Gaps = 3/248 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET LI E+A + + L ++ E ++SA+ Y H R++
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ VG L + G P Y APEL + YD
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDAFCGAPPYAAPELFQGKKYDGPEV 195
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + +
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIK 255
Query: 359 RLSWPELL 366
R + +++
Sbjct: 256 RGTLEQIM 263
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET LI E+A
Sbjct: 77 VKLFEVIETEKTLYLIMEYA 96
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 138/276 (50%), Gaps = 20/276 (7%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ----E 168
G E Y+ ++G G V + IH K A+KII +G S +E+ L++ E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 169 CEIQKHLA-HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNL 226
+I + ++ HPNII+ ++ET F L+ + L + L ++ LSE +I+ L
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 227 ISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAP 286
+ + LH ++HRDLKP+N+LL+ D L DFGF+ + G L + GTP Y+AP
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAP 179
Query: 287 ELIA-----ERP-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-- 338
E+I P Y D+WS G I Y + G PPF + ++R++ + + F S
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 339 --QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
S+T KDLV L +R + E L HP +
Sbjct: 240 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQ----E 58
G E Y+ ++G G V + IH K A+KII +G S +E+ L++ E
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKE 60
Query: 59 CEIQKHLA-HPNIIKFIASHETLNEFVLI 86
+I + ++ HPNII+ ++ET F L+
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLV 89
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + GTP Y+APE++ + Y
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 247
Query: 355 DASQRLS 361
D QRL
Sbjct: 248 DPKQRLG 254
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 100
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + GTP Y+APE++ + Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 355 DASQRLS 361
D QRL
Sbjct: 243 DPKQRLG 249
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 95
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 2/247 (0%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + + +T + + E+A+ L L + + +E + ++SAL YLH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
S V++RD+K +N++L+KDG + DFG + + GTP Y+APE++ + Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
D W LG + YE+ G PF L L+ +++ FP +S K L+ GLL+K
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKK 242
Query: 355 DASQRLS 361
D QRL
Sbjct: 243 DPKQRLG 249
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ + + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + + +T + + E+A+ GE +FH
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANG-----GELFFH 95
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPAFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 149/297 (50%), Gaps = 22/297 (7%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPN 179
++ + L+G G++G+V+K H+ + A+K++ +G E +KQE ++K+ H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRN 82
Query: 180 IIKFIASHETLN------EFVLITEF-AHMSLSNLLEQRK--KLSETICVQILSNLISAL 230
I + + N + L+ EF S+++L++ K L E I ++ L
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LH ++V+HRD+K QNVLL ++ L DFG + + + GTP +MAPE+IA
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 291 --ERP---YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF--PSQVSET 343
E P YD +DLWSLG A E+ G PP + + + L+ + S+
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK 262
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSR 400
++ ++ L K+ SQR + +L+ HP ++D + +D I D K+RG +
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHI--DRTKKKRGEK 317
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPN 69
++ + L+G G++G+V+K H+ + A+K++ +G E +KQE ++K+ H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV---TGDEEEEIKQEINMLKKYSHHRN 82
Query: 70 IIKFIAS 76
I + +
Sbjct: 83 IATYYGA 89
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 132/253 (52%), Gaps = 13/253 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N++ +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSS 110
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I LS ++ AL YLH+ V+HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS-VLRALSYLHNQGVIHRDIKS 169
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPE+I+ PY D+WSLG
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYK--DLVKGLLE----KDASQR 359
+ E+ G PP+ L +R ++ + P +V + +K +++G L+ ++ SQR
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRIRD---SLPPRVKDLHKVSSVLRGFLDLMLVREPSQR 286
Query: 360 LSWPELLHHPLVK 372
+ ELL HP +K
Sbjct: 287 ATAQELLGHPFLK 299
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IGEGS G V A K VA+K + + +EL L E I + H N++ +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSS 110
Query: 77 HETLNEFVLITEF 89
+ +E ++ EF
Sbjct: 111 YLVGDELWVVMEF 123
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 137/268 (51%), Gaps = 4/268 (1%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G F KV A H+ + VA+KI+ K+ G +L +K E E K+L H +I +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKN-TLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 187 HETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
ET N+ ++ E+ L + + + +LSE + ++SA+ Y+HS HRDLKP
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKP 136
Query: 246 QNVLLNKDGVAMLCDFGF-ARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTADLWSL 303
+N+L ++ L DFG A+ + L + G+ Y APELI + Y AD+WS+
Sbjct: 137 ENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSM 196
Query: 304 GCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWP 363
G + Y + G PF +++ L + + P +S + L++ +L+ D +R+S
Sbjct: 197 GILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMK 256
Query: 364 ELLHHPLVKDNLSSEIESQNNQDCIGFD 391
LL+HP + + + +E Q+ I D
Sbjct: 257 NLLNHPWIMQDYNYPVEWQSKNPFIHLD 284
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IG G F KV A H+ + VA+KI+ K+ G +L +K E E K+L H +I +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKN-TLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 77 HETLNEFVLITEF 89
ET N+ ++ E+
Sbjct: 77 LETANKIFMVLEY 89
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E + L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F SQ SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLVK--DNLSSEIESQNNQDCIGFDYCDKRRGSRKSITTI 406
K+ +RL+ E L HP + DN + + ++ + F RR S+ + + +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIV 313
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + S +T + + E+A+ L L + + SE + ++SAL YLH
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 235 SNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
S + V++RDLK +N++L+KDG + DFG + + + GTP Y+APE++ +
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
Y D W LG + YE+ G PF L L+ +++ FP + K L+ GLL+
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 388
Query: 354 KDASQRLS 361
KD QRL
Sbjct: 389 KDPKQRLG 396
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + S +T + + E+A+ GE +FH
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANG-----GELFFH 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 152/303 (50%), Gaps = 49/303 (16%)
Query: 111 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 164
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 165 LKQECEIQKHLA---HPNIIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKL-- 214
++ E + +HL HPN+++ ++ + + L+ E L+ L++ +
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV 117
Query: 215 -SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM 273
+ETI ++ L+ L +LHS+RV+HRDLKPQN+L+ G L DFG AR +
Sbjct: 118 PTETIK-DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMA 175
Query: 274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLI 326
LTS+ T Y APE++ + Y DLWS+GCI E+ P F+ S IL +I
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 327 RLLK----TQDVTFPSQ----------------VSETYKDLVKGLLEKDASQRLSWPELL 366
L +DV P Q + E KDL+ L + ++R+S L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 367 HHP 369
HP
Sbjct: 296 SHP 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 21/118 (17%)
Query: 1 MEKSN--GALEKYQKICLIGEGSFGKVFKAIHLDLK---KTVALKIIS-KSGRSGKELSS 54
MEK A ++Y+ + IGEG++GKVFKA DLK + VALK + ++G G LS+
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 55 LKQECEIQKHL---AHPNIIKFI---ASHETLNEFVLITEFAHMS------LSKLGEP 100
++ E + +HL HPN+++ T E L F H+ L K+ EP
Sbjct: 59 IR-EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILIGE 94
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + S +T + + E+A+ L L + + SE + ++SAL YLH
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 235 SNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
S + V++RDLK +N++L+KDG + DFG + + + GTP Y+APE++ +
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
Y D W LG + YE+ G PF L L+ +++ FP + K L+ GLL+
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 385
Query: 354 KDASQRLS 361
KD QRL
Sbjct: 386 KDPKQRLG 393
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + S +T + + E+A+ GE +FH
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANG-----GELFFH 238
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 257 KDPKKRMTIQDSLQHPWIK 275
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 78 LHEVYENKTDVILILE 93
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 5/279 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L ++ E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L + G+P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 254
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRR 397
R + +++ + N+ E + DY D RR
Sbjct: 255 RGTLEQIMKDRWM--NVGHEDDELKPYVAPLPDYKDPRR 291
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVMEYA 95
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 196
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 197 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 256
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 257 KDPKKRMTIQDSLQHPWIK 275
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 78 LHEVYENKTDVILILE 93
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG GS+G+V A+ + A K I K +++ KQE EI K L HPNII+ +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
E + L+ E L + ++ E+ +I+ +++SA+ Y H V HRDLKP
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKP 151
Query: 246 QNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
+N L + D L DFG A G M T + GTP Y++P+++ E Y D WS
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVL-EGLYGPECDEWS 209
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKDASQ 358
G + Y + G+PPF + ++ ++ TFP + VS + L++ LL K Q
Sbjct: 210 AGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQ 269
Query: 359 RLSWPELLHHPLVKDNLSS 377
R++ + L H + LSS
Sbjct: 270 RITSLQALEHEWFEKQLSS 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IG GS+G+V A+ + A K I K +++ KQE EI K L HPNII+ +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 77 HETLNEFVLITE 88
E + L+ E
Sbjct: 92 FEDNTDIYLVME 103
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 138/290 (47%), Gaps = 35/290 (12%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+EKY+KI IGEGS+G VFK + D + VA+K +S +E + K L H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 178 PNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
PN++ + L+ E+ H L L ++ + E + I + A+ + H +
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPYD 295
+HRD+KP+N+L+ K V LCDFGFAR + + T Y +PE L+ + Y
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 296 HTADLWSLGCIAYEIHMGHP--PFKT-VSILHLIRL------------------------ 328
D+W++GC+ E+ G P P K+ V L+LIR
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 329 -----LKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
++ ++ FP+ +S L+KG L D ++RL+ +LLHHP ++
Sbjct: 242 PDPEDMEPLELKFPN-ISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+EKY+KI IGEGS+G VFK + D + VA+K +S +E + K L H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 68 PNIIKFIASHETLNEFVLITEF 89
PN++ + L+ E+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEY 83
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 39/280 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG------------------------RSGKEL 162
IG+GS+G V A + + A+K++SK + +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 163 SSLKQECEIQKHLAHPNIIKFIASHETLNE------FVLITEFAHMSLSNLLEQRKKLSE 216
+ QE I K L HPN++K + + NE F L+ + M + L K LSE
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSE 136
Query: 217 TICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS 276
+LI + YLH +++HRD+KP N+L+ +DG + DFG + +L++
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 277 IKGTPLYMAPELIAE--RPYDHTA-DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD 333
GTP +MAPE ++E + + A D+W++G Y G PF I+ L +K+Q
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA 256
Query: 334 VTFPSQ--VSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
+ FP Q ++E KDL+ +L+K+ R+ PE+ HP V
Sbjct: 257 LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG GS+G+V A+ + A K I K +++ KQE EI K L HPNII+ +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
E + L+ E L + ++ E+ +I+ +++SA+ Y H V HRDLKP
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKP 134
Query: 246 QNVLL---NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
+N L + D L DFG A G M T + GTP Y++P+++ E Y D WS
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVL-EGLYGPECDEWS 192
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKDASQ 358
G + Y + G+PPF + ++ ++ TFP + VS + L++ LL K Q
Sbjct: 193 AGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQ 252
Query: 359 RLSWPELLHHPLVKDNLSS 377
R++ + L H + LSS
Sbjct: 253 RITSLQALEHEWFEKQLSS 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IG GS+G+V A+ + A K I K +++ KQE EI K L HPNII+ +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKY--FVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 77 HETLNEFVLITE 88
E + L+ E
Sbjct: 75 FEDNTDIYLVME 86
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 124/248 (50%), Gaps = 3/248 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L ++ E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L + G+P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 254
Query: 359 RLSWPELL 366
R + +++
Sbjct: 255 RGTLEQIM 262
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVMEYA 95
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQ 172
S + +++ + L+G+G+FGKV + A+KI+ K K E++ E +
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 173 KHLAHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALY 231
++ HP + S +T + + E+A+ L L + + SE + ++SAL
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 122
Query: 232 YLHSNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLHS + V++RDLK +N++L+KDG + DFG + + GTP Y+APE++
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y D W LG + YE+ G PF L L+ +++ FP + K L+ G
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 242
Query: 351 LLEKDASQRLS 361
LL+KD QRL
Sbjct: 243 LLKKDPKQRLG 253
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQ 62
S + +++ + L+G+G+FGKV + A+KI+ K K E++ E +
Sbjct: 3 SRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 62
Query: 63 KHLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
++ HP + S +T + + E+A+ GE +FH
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANG-----GELFFH 98
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + S +T + + E+A+ L L + + SE + ++SAL YLH
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 235 SNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
S + V++RDLK +N++L+KDG + DFG + + GTP Y+APE++ +
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
Y D W LG + YE+ G PF L L+ +++ FP + K L+ GLL+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 246
Query: 354 KDASQRLS 361
KD QRL
Sbjct: 247 KDPKQRLG 254
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + S +T + + E+A+ GE +FH
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANG-----GELFFH 99
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 175
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLH 234
HP + S +T + + E+A+ L L + + SE + ++SAL YLH
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 235 SNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
S + V++RDLK +N++L+KDG + DFG + + GTP Y+APE++ +
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
Y D W LG + YE+ G PF L L+ +++ FP + K L+ GLL+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 247
Query: 354 KDASQRLS 361
KD QRL
Sbjct: 248 KDPKQRLG 255
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHL 65
+ +++ + L+G+G+FGKV + A+KI+ K K E++ E + ++
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFH 103
HP + S +T + + E+A+ GE +FH
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANG-----GELFFH 100
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 14/259 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + +LI E A L + L +++ L+E + L +++ +YYLHS ++ H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DLKPQNVLLNKDGVA----MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L V + DFG A + G +I GTP ++APE++ P
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLE 197
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + + + S S KD ++ LL
Sbjct: 198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLV 257
Query: 354 KDASQRLSWPELLHHPLVK 372
KD +R++ + L HP +K
Sbjct: 258 KDPKKRMTIQDSLQHPWIK 276
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G G F V K A K I +KS R G +++E I K + HPN+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 73 FIASHETLNEFVLITE 88
+E + +LI E
Sbjct: 79 LHEVYENKTDVILILE 94
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 14/258 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 183 FIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F SQ SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLV 371
K+ +RL+ E L HP +
Sbjct: 259 KETRKRLTIQEALRHPWI 276
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L ++ E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L + G P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 254
Query: 359 RLSWPELL 366
R + +++
Sbjct: 255 RGTLEQIM 262
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVMEYA 95
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 19/272 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR--SGKELSSLKQECEIQKHL- 175
+KY +IG G V + +H A+KI+ + S ++L +++ + H+
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 176 ----AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
HP+II I S+E+ + L+ + L + L ++ LSE I+ +L+ A+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI- 289
+LH+N ++HRDLKP+N+LL+ + L DFGF+ + G L + GTP Y+APE++
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRELCGTPGYLAPEILK 272
Query: 290 -----AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QV 340
Y DLW+ G I + + G PPF + ++R++ F S
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 341 SETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
S T KDL+ LL+ D RL+ + L HP +
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 3/248 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA++II K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L ++ E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L + G+P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 254
Query: 359 RLSWPELL 366
R + +++
Sbjct: 255 RGTLEQIM 262
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA++II K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVMEYA 95
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + S GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 70
Query: 187 HETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
H+++ E +++ L + R+ SE + ++ ++ Y HSN ++HR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 243 LKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
LKP+N+LL K L DFG A + + GTP Y++PE++ + PY D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKD 355
+W+ G I Y + +G+PPF L +K +PS V+ K L+ +L +
Sbjct: 190 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 249
Query: 356 ASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+R++ + L P + ++ ++S I Q+ DC+
Sbjct: 250 PKKRITADQALKVPWICNRERVASAIHRQDXVDCL 284
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 70
Query: 77 HETLNE 82
H+++ E
Sbjct: 71 HDSIQE 76
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 3/248 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA++II K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L ++ E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L G+P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDEFCGSPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 254
Query: 359 RLSWPELL 366
R + +++
Sbjct: 255 RGTLEQIM 262
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA++II K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVMEYA 95
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 17/275 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 93
Query: 187 HETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
H+++ E +++ L + R+ SE + ++ ++ Y HSN ++HR+
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 153
Query: 243 LKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
LKP+N+LL K L DFG A + + GTP Y++PE++ + PY D
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKD 355
+W+ G I Y + +G+PPF L +K +PS V+ K L+ +L +
Sbjct: 213 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 272
Query: 356 ASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+R++ + L P + ++ ++S I Q+ DC+
Sbjct: 273 PKKRITADQALKVPWICNRERVASAIHRQDTVDCL 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 93
Query: 77 HETLNE 82
H+++ E
Sbjct: 94 HDSIQE 99
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 32 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + S GT Y++PEL+ E+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 270 ATKRLGCEEM 279
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 16/295 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E + L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F S SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLVK--DNLSSEIESQNNQDCIGFDYCDKRRGSRKSITTI 406
K+ +RL+ E L HP + DN + + ++ + F RR S+ + + +
Sbjct: 259 KETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIV 313
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 69
Query: 187 HETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
H+++ E +++ L + R+ SE + ++ ++ Y HSN ++HR+
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 129
Query: 243 LKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
LKP+N+LL K L DFG A + + GTP Y++PE++ + PY D
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKD 355
+W+ G I Y + +G+PPF L +K +PS V+ K L+ +L +
Sbjct: 189 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 248
Query: 356 ASQRLSWPELLHHPLV--KDNLSSEIESQNNQDC 387
+R++ + L P + ++ ++S I Q+ DC
Sbjct: 249 PKKRITADQALKVPWICNRERVASAIHRQDXVDC 282
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 69
Query: 77 HETLNE 82
H+++ E
Sbjct: 70 HDSIQE 75
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L + E ++SA+ Y H ++
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G + L + G P Y APEL + YD
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P S ++L+K L + S+
Sbjct: 195 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILNPSK 254
Query: 359 R 359
R
Sbjct: 255 R 255
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 76 VKLFEVIETEKTLYLVXEYA 95
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 160/319 (50%), Gaps = 35/319 (10%)
Query: 119 EKYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQK 173
E ++ + ++G+G +GKVF K + K A+K++ K+ R+ K+ + K E I +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKK----LSETICVQILSNLISA 229
+ HP I+ I + +T + LI E+ +S L Q ++ + +T C L+ + A
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEY--LSGGELFMQLEREGIFMEDTACF-YLAEISMA 133
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L +LH +++RDLKP+N++LN G L DFG + + + GT YMAPE++
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
++ D WSLG + Y++ G PPF + I + + P +++ +DL+K
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 350 GLLEKDASQRL-SWP----ELLHHPLVK-----DNLSSEIES------QNNQDCIGFDYC 393
LL+++A+ RL + P E+ HP + + L+ ++E Q+ +D FD
Sbjct: 254 KLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD-- 311
Query: 394 DKRRGSRKSITTIVESDSD 412
S+ + T V+S D
Sbjct: 312 -----SKFTRQTPVDSPDD 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 9 EKYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQK 63
E ++ + ++G+G +GKVF K + K A+K++ K+ R+ K+ + K E I +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 64 HLAHPNIIKFIASHETLNEFVLITEF 89
+ HP I+ I + +T + LI E+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEY 102
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 119/241 (49%), Gaps = 3/241 (1%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 181 IKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
+K ET L+ E+A + + L + E ++SA+ Y H ++
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-A 298
HRDLK +N+LL+ D + DFGF+ G L + G+P Y APEL + YD
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYDGPEV 187
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D+WSLG I Y + G PF ++ L + P +S ++L+K L + S+
Sbjct: 188 DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSK 247
Query: 359 R 359
R
Sbjct: 248 R 248
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + IG+G+F KV A H+ K VA+KII K+ + L L +E I K L HPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 71 IKFIASHETLNEFVLITEFA 90
+K ET L+ E+A
Sbjct: 69 VKLFEVIETEKTLYLVMEYA 88
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 36 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + S GT Y++PEL+ E+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 274 ATKRLGCEEM 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 14/258 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E + L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F S SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLV 371
K+ +RL+ E L HP +
Sbjct: 259 KETRKRLTIQEALRHPWI 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 159/319 (49%), Gaps = 35/319 (10%)
Query: 119 EKYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQK 173
E ++ + ++G+G +GKVF K + K A+K++ K+ R+ K+ + K E I +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKK----LSETICVQILSNLISA 229
+ HP I+ I + +T + LI E+ +S L Q ++ + +T C L+ + A
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEY--LSGGELFMQLEREGIFMEDTACF-YLAEISMA 133
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L +LH +++RDLKP+N++LN G L DFG + + GT YMAPE++
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
++ D WSLG + Y++ G PPF + I + + P +++ +DL+K
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLK 253
Query: 350 GLLEKDASQRL-SWP----ELLHHPLVK-----DNLSSEIES------QNNQDCIGFDYC 393
LL+++A+ RL + P E+ HP + + L+ ++E Q+ +D FD
Sbjct: 254 KLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD-- 311
Query: 394 DKRRGSRKSITTIVESDSD 412
S+ + T V+S D
Sbjct: 312 -----SKFTRQTPVDSPDD 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 9 EKYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQK 63
E ++ + ++G+G +GKVF K + K A+K++ K+ R+ K+ + K E I +
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 64 HLAHPNIIKFIASHETLNEFVLITEF 89
+ HP I+ I + +T + LI E+
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEY 102
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 33 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 17 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 255 ATKRLGCEEM 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 140/283 (49%), Gaps = 16/283 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+ YQ +G+G+F V + + + A KII+ S ++ L++E I + L HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 179 NIIKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
NI++ H++++E +++ L + R+ SE + ++ ++ ++H
Sbjct: 91 NIVRL---HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 235 SNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
+ ++HRDLKP+N+LL K L DFG A + GTP Y++PE++ +
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDL 347
PY D+W+ G I Y + +G+PPF L + +K FPS V+ K+L
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 348 VKGLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+ +L + ++R++ + L HP V + ++S + Q +C+
Sbjct: 268 INQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECL 310
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+ YQ +G+G+F V + + + A KII+ S ++ L++E I + L HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 69 NIIKFIASHETLNE 82
NI++ H++++E
Sbjct: 91 NIVRL---HDSISE 101
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 34/289 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLA 176
++KY+K+ IGEG++G VFKA + + + VALK + G S+L++ C + K L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELK 59
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
H NI++ + + L+ EF L + L I L L+ L + HS
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPY 294
VLHRDLKPQN+L+N++G L +FG AR+ + ++ T Y P+ L + Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 295 DHTADLWSLGCIAYEI-HMGHPPFKTVSI----LHLIRLLKTQ-DVTFPS---------- 338
+ D+WS GCI E+ + G P F + + RLL T + +PS
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 339 --------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
+++ T +DL++ LL+ + QR+S E L HP D
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLA 66
++KY+K+ IGEG++G VFKA + + + VALK + G S+L++ C + K L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELK 59
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSK 96
H NI++ + + L+ EF L K
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKK 89
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
++GEGSF V A L + A+KI+ K ++ + +E ++ L HP +K
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 185 ASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ + + +A + L + + ET + ++SAL YLH ++HRDL
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 133
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHTADLW 301
KP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+ ++DLW
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLW 193
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL DA++RL
Sbjct: 194 ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLG 253
Query: 362 WPEL 365
E+
Sbjct: 254 CEEM 257
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 32 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 270 ATKRLGCEEM 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 33 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
++GEGSF V A L + A+KI+ K ++ + +E ++ L HP +K
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 185 ASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ + + +A + L + + ET + ++SAL YLH ++HRDL
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 134
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHTADLW 301
KP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+ ++DLW
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLW 194
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL DA++RL
Sbjct: 195 ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLG 254
Query: 362 WPEL 365
E+
Sbjct: 255 CEEM 258
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 134/260 (51%), Gaps = 14/260 (5%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
L+ Y KI GEGS G V A + VA+K++ + +EL L E I + H
Sbjct: 47 LDSYVKI---GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQH 101
Query: 178 PNIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N+++ S+ E ++ EF +L++++ Q +L+E + ++ AL YLH+
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQ 160
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDH 296
V+HRD+K ++LL DG L DFGF ++ + GTP +MAPE+I+ Y
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 297 TADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGL 351
D+WSLG + E+ G PP+ + S + ++ L+ D P +VS +D ++ +
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR--DSPPPKLKNSHKVSPVLRDFLERM 278
Query: 352 LEKDASQRLSWPELLHHPLV 371
L +D +R + ELL HP +
Sbjct: 279 LVRDPQERATAQELLDHPFL 298
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
L+ Y KI GEGS G V A + VA+K++ + +EL L E I + H
Sbjct: 47 LDSYVKI---GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQH 101
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N+++ S+ E ++ EF
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEF 123
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 94
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 153
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 213
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 214 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 271
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 272 TAAELLKHPFL 282
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 14/258 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKII----SKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G G F V K A K I S++ R G +++E I + + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 183 FIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHR 241
+E + VLI E + L + L Q++ LSE + ++ + YLH+ ++ H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DLKPQNVLLNKDGVAM----LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKP+N++L + + L DFG A + G +I GTP ++APE++ P
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE 353
AD+WS+G I Y + G PF K ++ ++ + D F S SE KD ++ LL
Sbjct: 199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLV 258
Query: 354 KDASQRLSWPELLHHPLV 371
K+ +RL+ E L HP +
Sbjct: 259 KETRKRLTIQEALRHPWI 276
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 96
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 155
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 215
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 216 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 273
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 274 TAAELLKHPFL 284
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 33 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
++GEGSF V A L + A+KI+ K ++ + +E ++ L HP +K
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 185 ASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ + + +A + L + + ET + ++SAL YLH ++HRDL
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 135
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHTADLW 301
KP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+ ++DLW
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLW 195
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL DA++RL
Sbjct: 196 ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLG 255
Query: 362 WPEL 365
E+
Sbjct: 256 CEEM 259
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 89
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 148
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 208
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 209 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 266
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 267 TAAELLKHPFL 277
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 85
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 144
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 262
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 263 TAAELLKHPFL 273
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 34/289 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLA 176
++KY+K+ IGEG++G VFKA + + + VALK + G S+L++ C + K L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELK 59
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
H NI++ + + L+ EF L + L I L L+ L + HS
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPY 294
VLHRDLKPQN+L+N++G L DFG AR+ + ++ T Y P+ L + Y
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 295 DHTADLWSLGCIAYEI-HMGHPPFKTVSI----LHLIRLLKTQ-DVTFPS---------- 338
+ D+WS GCI E+ + P F + + RLL T + +PS
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 339 --------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
+++ T +DL++ LL+ + QR+S E L HP D
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLA 66
++KY+K+ IGEG++G VFKA + + + VALK + G S+L++ C + K L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELK 59
Query: 67 HPNIIKFIASHETLNEFVLITEFAHMSLSK 96
H NI++ + + L+ EF L K
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKK 89
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 36 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 274 ATKRLGCEEM 283
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 38 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP+ +DLV+ LL D
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 276 ATKRLGCEEM 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI+K
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 187 HETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
ET L+ E+A + + L ++ E ++SA+ Y H ++HRDLK
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKA 142
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT-ADLWSLG 304
+N+LL+ D + DFGF+ VG L + G+P Y APEL + YD D+WSLG
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNK-LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 201
Query: 305 CIAYEIHMGHPPF 317
I Y + G PF
Sbjct: 202 VILYTLVSGSLPF 214
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IG+G+F KV A H+ + VA+KII K+ + L L +E I K L HPNI+K
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 77 HETLNEFVLITEFA 90
ET L+ E+A
Sbjct: 83 IETEKTLYLVMEYA 96
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 4/244 (1%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFI 184
++GEGSF V A L + A+KI+ K ++ + +E ++ L HP +K
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 185 ASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ + + +A + L + + ET + ++SAL YLH ++HRDL
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 136
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHTADLW 301
KP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+ ++DLW
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLW 196
Query: 302 SLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL DA++RL
Sbjct: 197 ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLG 256
Query: 362 WPEL 365
E+
Sbjct: 257 CEEM 260
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 25/304 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS----GRSGKELSSLKQ------- 167
E Y K+ +G G++G+V + A+K+I KS GR + ++++
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 168 ECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILS 224
E + K L HPNIIK E F L+TEF L EQ R K E I+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGG--ELFEQIINRHKFDECDAANIMK 153
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLL-NKDGV--AMLCDFGFARSMAVGTHMLTSIKGTP 281
++S + YLH + ++HRD+KP+N+LL NK+ + + DFG + S + L GT
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDRLGTA 212
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP---- 337
Y+APE++ ++ Y+ D+WS G I Y + G+PPF + +I+ ++ F
Sbjct: 213 YYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW 271
Query: 338 SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRR 397
+S+ K+L+K +L D ++R + E L+ +K ++ +S C K
Sbjct: 272 KNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFE 331
Query: 398 GSRK 401
GS+K
Sbjct: 332 GSQK 335
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS----GRSGKELSSLKQ------- 57
E Y K+ +G G++G+V + A+K+I KS GR + ++++
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 58 ECEIQKHLAHPNIIKFIASHETLNEFVLITEF 89
E + K L HPNIIK E F L+TEF
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 216
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 275
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 336 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 393
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 394 TAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IGEGS G V A K VA+K + + +EL L E I + H N+++ S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNS 139
Query: 187 HETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
+ +E ++ EF +L++++ + E I L+ ++ AL LH+ V+HRD+K
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKS 198
Query: 246 QNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGC 305
++LL DG L DFGF ++ + GTP +MAPELI+ PY D+WSLG
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 258
Query: 306 IAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-----QVSETYKDLVKGLLEKDASQRL 360
+ E+ G PP+ L +++++ D P +VS + K + LL +D +QR
Sbjct: 259 MVIEMVDGEPPYFNEPPLKAMKMIR--DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA 316
Query: 361 SWPELLHHPLV 371
+ ELL HP +
Sbjct: 317 TAAELLKHPFL 327
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 40 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + +A + L + + ET + ++SAL YLH
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 278 ATKRLGCEEM 287
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 111 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 166
M + E ++C +IG+G+F V + I+ + + A+KI+ + G LK
Sbjct: 15 MADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNL-LEQRKK------LSETIC 219
+E I L HP+I++ + ++ + ++ EF M ++L E K+ SE +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEF--MDGADLCFEIVKRADAGFVYSEAVA 132
Query: 220 VQILSNLISALYYLHSNRVLHRDLKPQNVLL---NKDGVAMLCDFGFARSMAVGTHMLTS 276
+ ++ AL Y H N ++HRD+KP+NVLL L DFG A + +
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF 336
GTP +MAPE++ PY D+W G I + + G PF ++K +
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 337 PSQ---VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD 373
P Q +SE+ KDLV+ +L D ++R++ E L+HP +K+
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 1 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 56
M + E ++C +IG+G+F V + I+ + + A+KI+ + G LK
Sbjct: 15 MADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 57 QECEIQKHLAHPNIIKFIASHETLNEFVLITEF 89
+E I L HP+I++ + ++ + ++ EF
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 11/252 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+ A + + VA+K +S SG+ S ++ + +E + L HPN I++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 186 SHETLNEFVLITEFAHMSLSNLLE-QRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ + L+ E+ S S+LLE +K L E + + L YLHS+ ++HRD+K
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI---AERPYDHTADLW 301
N+LL++ G+ L DFG A MA + GTP +MAPE+I E YD D+W
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIMAPANXFV----GTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 302 SLGCIAYEIHMGHPP-FKTVSILHLIRLLKTQDVTFPS-QVSETYKDLVKGLLEKDASQR 359
SLG E+ PP F ++ L + + + S SE +++ V L+K R
Sbjct: 199 SLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258
Query: 360 LSWPELLHHPLV 371
+ LL H V
Sbjct: 259 PTSEVLLKHRFV 270
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+ A + + VA+K +S SG+ S ++ + +E + L HPN I++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 76 SHETLNEFVLITEFAHMSLSKLGE 99
+ + L+ E+ S S L E
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLE 106
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 11/252 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+ A + + VA+K +S SG+ S ++ + +E + L HPN I++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 186 SHETLNEFVLITEFAHMSLSNLLE-QRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ + L+ E+ S S+LLE +K L E + + L YLHS+ ++HRD+K
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI---AERPYDHTADLW 301
N+LL++ G+ L DFG A MA + GTP +MAPE+I E YD D+W
Sbjct: 182 AGNILLSEPGLVKLGDFGSASIMAPANXFV----GTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 302 SLGCIAYEIHMGHPP-FKTVSILHLIRLLKTQDVTFPS-QVSETYKDLVKGLLEKDASQR 359
SLG E+ PP F ++ L + + + S SE +++ V L+K R
Sbjct: 238 SLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297
Query: 360 LSWPELLHHPLV 371
+ LL H V
Sbjct: 298 PTSEVLLKHRFV 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+ A + + VA+K +S SG+ S ++ + +E + L HPN I++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 76 SHETLNEFVLITEFAHMSLSKLGE 99
+ + L+ E+ S S L E
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLE 145
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 33 KFGKI--LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + + FP + +DLV+ LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 6/250 (2%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP 178
K+ KI +GEGSF V A L + A+KI+ K ++ + +E ++ L HP
Sbjct: 35 KFGKI--LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 179 NIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
+K + + + +A + L + + ET + ++SAL YLH
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 238 VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS--IKGTPLYMAPELIAERPYD 295
++HRDLKP+N+LLN+D + DFG A+ ++ + + GT Y++PEL+ E+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
++DLW+LGCI Y++ G PPF+ + + + + FP + +DLV+ LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 356 ASQRLSWPEL 365
A++RL E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNIIKFIA 185
IG GS+ + + +H A+K+I KS R E E EI ++ HPNII
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE------EIEILLRYGQHPNIITLKD 88
Query: 186 SHETLNEFVLITEFAHMSLSNLLE---QRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
++ L+TE M LL+ ++K SE +L + + YLHS V+HRD
Sbjct: 89 VYDDGKHVYLVTEL--MRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRD 146
Query: 243 LKPQNVL-LNKDGVA---MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTA 298
LKP N+L +++ G +CDFGFA+ + +L + T ++APE++ + YD
Sbjct: 147 LKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGC 206
Query: 299 DLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKGL 351
D+WSLG + Y + G+ PF + + ++ + + T + VSET KDLV +
Sbjct: 207 DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKM 266
Query: 352 LEKDASQRLSWPELLHHPLV--KDNLS-SEIESQNNQ 385
L D QRL+ ++L HP V KD L S++ Q+ Q
Sbjct: 267 LHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQ 303
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIA 75
IG GS+ + + +H A+K+I KS R E E EI ++ HPNII
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE------EIEILLRYGQHPNIITLKD 88
Query: 76 SHETLNEFVLITEF 89
++ L+TE
Sbjct: 89 VYDDGKHVYLVTEL 102
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 16/283 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++YQ IG+G+F V + + L A KII+ S ++ L++E I + L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 179 NIIKFIASHETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
NI++ H++++E +++ L + R+ SE + ++ A+ + H
Sbjct: 64 NIVRL---HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 235 SNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
V+HRDLKP+N+LL K L DFG A + GTP Y++PE++ +
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKDL 347
Y D+W+ G I Y + +G+PPF L + +K FPS V+ K+L
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 348 VKGLLEKDASQRLSWPELLHHPLV--KDNLSSEIESQNNQDCI 388
+ +L + ++R++ E L HP V + ++S + Q +C+
Sbjct: 241 INQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECL 283
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++YQ IG+G+F V + + L A KII+ S ++ L++E I + L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 69 NIIKFIASHETLNE 82
NI++ H++++E
Sbjct: 64 NIVRL---HDSISE 74
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 138/276 (50%), Gaps = 24/276 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNIIKFIA 185
IG GS+ + + +H A+K+I KS R E E EI ++ HPNII
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE------EIEILLRYGQHPNIITLKD 88
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
++ L+TE L +L Q K SE +L + + YLHS V+HRDL
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLHTIGKTVEYLHSQGVVHRDL 147
Query: 244 KPQNVL-LNKDGVA---MLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
KP N+L +++ G +CDFGFA+ + +L + T ++APE++ + YD D
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 300 LWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKGLL 352
+WSLG + Y + G+ PF + + ++ + + T + VSET KDLV +L
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
Query: 353 EKDASQRLSWPELLHHPLV--KDNLS-SEIESQNNQ 385
D QRL+ ++L HP V KD L S++ Q+ Q
Sbjct: 268 HVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQ 303
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIA 75
IG GS+ + + +H A+K+I KS R E E EI ++ HPNII
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE------EIEILLRYGQHPNIITLKD 88
Query: 76 SHETLNEFVLITEF 89
++ L+TE
Sbjct: 89 VYDDGKHVYLVTEL 102
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 38/283 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFI 184
L+GEG++ KV A+ L K A+KII K ++G S + +E E + + + NI++ I
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEK--QAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 185 ASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E F L+ E S+ ++++K +E +++ ++ +AL +LH+ + HRDL
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 244 KPQNVLL---NKDGVAMLCDFGFARSM-------AVGTHMLTSIKGTPLYMAPELI---- 289
KP+N+L K +CDF M + T LT+ G+ YMAPE++
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKT---------------VSILHLIRLLKTQD 333
YD DLWSLG + Y + G+PPF V L ++
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 334 VTFPSQ----VSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
FP + +S KDL+ LL +DA QRLS ++L HP V+
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFI 74
L+GEG++ KV A+ L K A+KII K ++G S + +E E + + + NI++ I
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEK--QAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 75 ASHETLNEFVLITE 88
E F L+ E
Sbjct: 78 EFFEDDTRFYLVFE 91
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 139/268 (51%), Gaps = 26/268 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G GKV + H + ALK++ S ++ +E+ Q P+I+ +
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS------GGPHIVCILD 70
Query: 186 SHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRV 238
+E ++ +++ L + +++R + +E +I+ ++ +A+ +LHS+ +
Sbjct: 71 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 130
Query: 239 LHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
HRD+KP+N+L KD V L DFGFA+ + L + TP Y+APE++ YD
Sbjct: 131 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVAPEVLGPEKYD 188
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFP----SQVSETYKDL 347
+ D+WSLG I Y + G PPF + + + R ++ FP S+VSE K L
Sbjct: 189 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 248
Query: 348 VKGLLEKDASQRLSWPELLHHPLVKDNL 375
++ LL+ D ++RL+ + ++HP + ++
Sbjct: 249 IRLLLKTDPTERLTITQFMNHPWINQSM 276
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 139/268 (51%), Gaps = 26/268 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G GKV + H + ALK++ S ++ +E+ Q P+I+ +
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS------GGPHIVCILD 89
Query: 186 SHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRV 238
+E ++ +++ L + +++R + +E +I+ ++ +A+ +LHS+ +
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 239 LHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
HRD+KP+N+L KD V L DFGFA+ + L + TP Y+APE++ YD
Sbjct: 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPYYVAPEVLGPEKYD 207
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFP----SQVSETYKDL 347
+ D+WSLG I Y + G PPF + + + R ++ FP S+VSE K L
Sbjct: 208 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 267
Query: 348 VKGLLEKDASQRLSWPELLHHPLVKDNL 375
++ LL+ D ++RL+ + ++HP + ++
Sbjct: 268 IRLLLKTDPTERLTITQFMNHPWINQSM 295
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 4/254 (1%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+G G+FGKV H VA+KI+++ RS + +K+E + K HP+IIK
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 186 SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
T +F ++ E+ L + + + ++ E ++ ++SA+ Y H + V+HRDLK
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTADLWSL 303
P+NVLL+ A + DFG + M+ G + TS G+P Y APE+I+ R Y D+WS
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC-GSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 304 GCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWP 363
G I Y + G PF + L + ++ P ++ + L+ +L+ D +R +
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK 257
Query: 364 ELLHHPLVKDNLSS 377
++ H K +L S
Sbjct: 258 DIREHEWFKQDLPS 271
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 75
+G G+FGKV H VA+KI+++ RS + +K+E + K HP+IIK
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 76 SHETLNEFVLITEFA 90
T +F ++ E+
Sbjct: 79 VISTPTDFFMVMEYV 93
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 16/213 (7%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALK-IISKSGRSGKELSSLKQECEIQKHLA 176
+ KY+K+ IG+G+FG+VFKA H + VALK ++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 177 HPNIIKFI--------ASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLI 227
H N++ I + L+ +F L+ LL K + + +++ L+
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG----THMLTSIKGTPLY 283
+ LYY+H N++LHRD+K NVL+ +DGV L DFG AR+ ++ + + T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 284 MAPE-LIAERPYDHTADLWSLGCIAYEIHMGHP 315
PE L+ ER Y DLW GCI E+ P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVAL-KIISKSGRSGKELSSLKQECEIQKHLA 66
+ KY+K+ IG+G+FG+VFKA H + VAL K++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 67 HPNIIKFI 74
H N++ I
Sbjct: 76 HENVVNLI 83
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 16/213 (7%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALK-IISKSGRSGKELSSLKQECEIQKHLA 176
+ KY+K+ IG+G+FG+VFKA H + VALK ++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 177 HPNIIKFI--------ASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLI 227
H N++ I + L+ +F L+ LL K + + +++ L+
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG----THMLTSIKGTPLY 283
+ LYY+H N++LHRD+K NVL+ +DGV L DFG AR+ ++ + + T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 284 MAPE-LIAERPYDHTADLWSLGCIAYEIHMGHP 315
PE L+ ER Y DLW GCI E+ P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVAL-KIISKSGRSGKELSSLKQECEIQKHLA 66
+ KY+K+ IG+G+FG+VFKA H + VAL K++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 67 HPNIIKFI 74
H N++ I
Sbjct: 76 HENVVNLI 83
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 42/291 (14%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+++++ +G G++ V+K ++ VALK + G ++++ E + K L H N
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHEN 64
Query: 180 IIKFIASHETLNEFVLITEFAHMSLSNLLEQR------KKLSETICVQILSNLISALYYL 233
I++ T N+ L+ EF L ++ R + L + L+ L +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAER 292
H N++LHRDLKPQN+L+NK G L DFG AR+ + + +S T Y AP+ L+ R
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-----KTQDVTFPS--------- 338
Y + D+WS GCI E+ G P F + ++L+ + +PS
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNP 244
Query: 339 -----------QVSETYK---------DLVKGLLEKDASQRLSWPELLHHP 369
QV + + D + GLL+ + RLS + LHHP
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 69
+++++ +G G++ V+K ++ VALK + G ++++ E + K L H N
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHEN 64
Query: 70 IIKFIASHETLNEFVLITEFAHMSLSK 96
I++ T N+ L+ EF L K
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKK 91
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 179 NIIKFIAS--HETLNEFVLITEFAHMS-----LSNLLEQRKKLSETICVQILSNLISALY 231
NI+++ T ++ E+ ++ ++R+ L E +++++ L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 232 YLH-----SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAP 286
H + VLHRDLKP NV L+ L DFG AR + T + GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 287 ELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL---IRLLKTQDVTFPSQVSET 343
E + Y+ +D+WSLGC+ YE+ PPF S L IR K + + P + S+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDE 243
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLV 371
+++ +L R S E+L +PL+
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 69 NIIKF 73
NI+++
Sbjct: 66 NIVRY 70
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 179 NIIKFIAS--HETLNEFVLITEFAHMS-----LSNLLEQRKKLSETICVQILSNLISALY 231
NI+++ T ++ E+ ++ ++R+ L E +++++ L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 232 YLH-----SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAP 286
H + VLHRDLKP NV L+ L DFG AR + T + GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 287 ELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL---IRLLKTQDVTFPSQVSET 343
E + Y+ +D+WSLGC+ YE+ PPF S L IR K + + P + S+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDE 243
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLV 371
+++ +L R S E+L +PL+
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 69 NIIKF 73
NI+++
Sbjct: 66 NIVRY 70
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 16/213 (7%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALK-IISKSGRSGKELSSLKQECEIQKHLA 176
+ KY+K+ IG+G+FG+VFKA H + VALK ++ ++ + G +++L+ E +I + L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 74
Query: 177 HPNIIKFI--------ASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLI 227
H N++ I + L+ +F L+ LL K + + +++ L+
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG----THMLTSIKGTPLY 283
+ LYY+H N++LHRD+K NVL+ +DGV L DFG AR+ ++ + + T Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 284 MAPE-LIAERPYDHTADLWSLGCIAYEIHMGHP 315
PE L+ ER Y DLW GCI E+ P
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVAL-KIISKSGRSGKELSSLKQECEIQKHLA 66
+ KY+K+ IG+G+FG+VFKA H + VAL K++ ++ + G +++L+ E +I + L
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 74
Query: 67 HPNIIKFI 74
H N++ I
Sbjct: 75 HENVVNLI 82
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 16/213 (7%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALK-IISKSGRSGKELSSLKQECEIQKHLA 176
+ KY+K+ IG+G+FG+VFKA H + VALK ++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 177 HPNIIKFI--------ASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLI 227
H N++ I + L+ +F L+ LL K + + +++ L+
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG----THMLTSIKGTPLY 283
+ LYY+H N++LHRD+K NVL+ +DGV L DFG AR+ ++ + + T Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 284 MAPE-LIAERPYDHTADLWSLGCIAYEIHMGHP 315
PE L+ ER Y DLW GCI E+ P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVAL-KIISKSGRSGKELSSLKQECEIQKHLA 66
+ KY+K+ IG+G+FG+VFKA H + VAL K++ ++ + G +++L+ E +I + L
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLK 75
Query: 67 HPNIIKFI 74
H N++ I
Sbjct: 76 HENVVNLI 83
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 15/256 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 70
Query: 187 HETLNE----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
H+++ E +++ L + R+ SE + ++ ++ Y HSN ++HR+
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRN 130
Query: 243 LKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
LKP+N+LL K L DFG A + + GTP Y++PE++ + PY D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKD 355
+W+ G I Y + +G+PPF L +K +PS V+ K L+ +L +
Sbjct: 190 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVN 249
Query: 356 ASQRLSWPELLHHPLV 371
+R++ + L P +
Sbjct: 250 PKKRITADQALKVPWI 265
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G+G+F V + +H A KII+ S ++ L++E I + L HPNI++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL--- 70
Query: 77 HETLNE 82
H+++ E
Sbjct: 71 HDSIQE 76
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 36/302 (11%)
Query: 109 VKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQE 168
V S ++++Y++I +GEG++G+V+KAI +TVA+K I + +E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 169 CEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLIS 228
+ K L H NII+ + + LI E+A L +++ +S + L LI+
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 229 ALYYLHSNRVLHRDLKPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLY 283
+ + HS R LHRDLKPQN+LL ++ V + DFG AR+ + T T Y
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWY 203
Query: 284 MAPE-LIAERPYDHTADLWSLGCIAYEIHMGHP--P--------FKTVSILHL------- 325
PE L+ R Y + D+WS+ CI E+ M P P FK +L L
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263
Query: 326 -IRLLKTQDVTFPSQVSETYKDLV------------KGLLEKDASQRLSWPELLHHPLVK 372
+ L +FP +T K ++ +LE D +R+S L HP
Sbjct: 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
Query: 373 DN 374
N
Sbjct: 324 HN 325
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQK 63
S ++++Y++I +GEG++G+V+KAI +TVA+K I + +E + K
Sbjct: 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLK 88
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSK 96
L H NII+ + + LI E+A L K
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYAENDLKK 121
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 61 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 113
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 114 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 173
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 174 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 232
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 233 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 292
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 293 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 107
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 167
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 226
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 286
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+G G+FGKV H VA+KI+++ RS + +K+E + K HP+IIK
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 186 SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
T +F ++ E+ L + + + ++ E ++ ++SA+ Y H + V+HRDLK
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTADLWSL 303
P+NVLL+ A + DFG + M+ G + S G+P Y APE+I+ R Y D+WS
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC-GSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 304 GCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWP 363
G I Y + G PF + L + ++ P ++ + L+ +L+ D +R +
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIK 257
Query: 364 ELLHHPLVKDNLSS 377
++ H K +L S
Sbjct: 258 DIREHEWFKQDLPS 271
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 75
+G G+FGKV H VA+KI+++ RS + +K+E + K HP+IIK
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 76 SHETLNEFVLITEFA 90
T +F ++ E+
Sbjct: 79 VISTPTDFFMVMEYV 93
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 63
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 182
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 183 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 242
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 243 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 63
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 182
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 183 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 242
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 243 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 61
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 62 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 180
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 181 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 240
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 241 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 10 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 62
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 63 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 122
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 123 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 181
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 182 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 241
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 242 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 16 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 68
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 69 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 128
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 129 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 187
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 188 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 247
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 248 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 17 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 69
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 70 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 129
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 130 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 188
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 189 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 248
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 249 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 25 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 77
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 78 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 137
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 138 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 196
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 197 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 256
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 257 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 144/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 15 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 67
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 68 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 127
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 128 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 186
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 187 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 246
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 247 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 4/246 (1%)
Query: 120 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
HP I+K + +T + LI +F L L + +E L+ L AL +LHS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+++RDLKP+N+LL+++G L DFG ++ S GT YMAPE++ R +
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 205
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
+AD WS G + +E+ G PF+ + ++ + P +S + L++ L +++
Sbjct: 206 QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRN 265
Query: 356 ASQRLS 361
+ RL
Sbjct: 266 PANRLG 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 10 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
HP I+K + +T + LI +F
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDF 108
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 4/246 (1%)
Query: 120 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
HP I+K + +T + LI +F L L + +E L+ L AL +LHS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+++RDLKP+N+LL+++G L DFG ++ S GT YMAPE++ R +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
+AD WS G + +E+ G PF+ + ++ + P +S + L++ L +++
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRN 264
Query: 356 ASQRLS 361
+ RL
Sbjct: 265 PANRLG 270
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 10 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
HP I+K + +T + LI +F
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDF 107
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 18/254 (7%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G+G++G V+ L + +A+K I + R + L +E + KHL H NI++++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 186 SHETLNEFV--LITEFAHMSLSNLLEQR----KKLSETICVQILSNLISALYYLHSNRVL 239
S + N F+ + + SLS LL + K +TI ++ L YLH N+++
Sbjct: 87 SF-SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHDNQIV 144
Query: 240 HRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP--YDH 296
HRD+K NVL+N GV + DFG ++ +A + GT YMAPE+I + P Y
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 297 TADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLL 352
AD+WSLGC E+ G PPF + + + + + K P +S K +
Sbjct: 205 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP-EIPESMSAEAKAFILKCF 263
Query: 353 EKDASQRLSWPELL 366
E D +R +LL
Sbjct: 264 EPDPDKRACANDLL 277
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G+G++G V+ L + +A+K I + R + L +E + KHL H NI++++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 76 SHETLNEFVLI 86
S + N F+ I
Sbjct: 87 SF-SENGFIKI 96
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 124/245 (50%), Gaps = 4/245 (1%)
Query: 121 YQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
++ + ++G+GSFGKVF K D A+K++ K+ ++ K E +I + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 178 PNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
P ++K + +T + LI +F L L + +E L+ L L +LHS
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDH 296
+++RDLKP+N+LL+++G L DFG ++ S GT YMAPE++ + + H
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 297 TADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA 356
+AD WS G + +E+ G PF+ + L+ + P +S + L++ L +++
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNP 269
Query: 357 SQRLS 361
+ RL
Sbjct: 270 ANRLG 274
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 11 YQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
++ + ++G+GSFGKVF K D A+K++ K+ ++ K E +I + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 68 PNIIKFIASHETLNEFVLITEF 89
P ++K + +T + LI +F
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDF 111
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 4/246 (1%)
Query: 120 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
HP I+K + +T + LI +F L L + +E L+ L AL +LHS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD 295
+++RDLKP+N+LL+++G L DFG ++ S GT YMAPE++ R +
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD 355
+AD WS G + +E+ G PF+ + ++ + P +S + L++ L +++
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRN 264
Query: 356 ASQRLS 361
+ RL
Sbjct: 265 PANRLG 270
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 10 KYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
+++ + ++G+GSFGKVF K D ++ A+K++ K+ ++ K E +I +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
HP I+K + +T + LI +F
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDF 107
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 142/336 (42%), Gaps = 44/336 (13%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL +F+ S F+ ++ + +GE WF +
Sbjct: 153 HLGQAPFQEFLDS----KYFLRFLQWKWLEAQPMGEDWFLD------------------- 189
Query: 124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
++G G FG+VF +K T L K + + Q ++K + +F
Sbjct: 190 FRVLGRGGFGEVFAC---QMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 184 IAS----HETLNEFVLITEFAHMS-----LSNLLEQRKKLSETICVQILSNLISALYYLH 234
I S ET + L+ + + N+ E E + + ++S L +LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
+++RDLKP+NVLL+ DG + D G A + G GTP +MAPEL+ Y
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKT----VSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
D + D ++LG YE+ PF+ V L + + Q VT+P + S KD +
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 351 LLEKDASQRLSWPE-----LLHHPLVKDNLSSEIES 381
LL+KD +RL + + L HPL +D ++E+
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 143/279 (51%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 9 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 61
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 62 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT T
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTEPCYT 180
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 181 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 240
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 241 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNIIKFIA 185
IG GS+ + IH A+KII KS R E E EI ++ HPNII
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE------EIEILLRYGQHPNIITLKD 83
Query: 186 SHETLNEFVLITEFAHMSLSNLLE---QRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
++ ++TE M LL+ ++K SE +L + + YLH+ V+HRD
Sbjct: 84 VYDDGKYVYVVTEL--MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 243 LKPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
LKP N+L N + + +CDFGFA+ + +L + T ++APE++ + YD
Sbjct: 142 LKPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAA 200
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVS------ILHLIRLLK-TQDVTFPSQVSETYKDLVKG 350
D+WSLG + Y + G+ PF IL I K + + + VS+T KDLV
Sbjct: 201 CDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 351 LLEKDASQRLSWPELLHHPLV 371
+L D QRL+ +L HP +
Sbjct: 261 MLHVDPHQRLTAALVLRHPWI 281
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIA 75
IG GS+ + IH A+KII KS R E E EI ++ HPNII
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE------EIEILLRYGQHPNIITLKD 83
Query: 76 SHETLNEFVLITEF 89
++ ++TE
Sbjct: 84 VYDDGKYVYVVTEL 97
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 19/281 (6%)
Query: 111 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 166
M + E ++C +IG+G F V + I+ + + A+KI+ + G LK
Sbjct: 15 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNL-LEQRKK------LSETIC 219
+E I L HP+I++ + ++ + ++ EF M ++L E K+ SE +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEF--MDGADLCFEIVKRADAGFVYSEAVA 132
Query: 220 VQILSNLISALYYLHSNRVLHRDLKPQNVLL-NKDGVAMLCDFGFARSMAVGTHMLTSIK 278
+ ++ AL Y H N ++HRD+KP VLL +K+ A + GF ++ +G L +
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 279 --GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF 336
GTP +MAPE++ PY D+W G I + + G PF ++K +
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 337 PSQ---VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN 374
P Q +SE+ KDLV+ +L D ++R++ E L+HP +K+
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 56
M + E ++C +IG+G F V + I+ + + A+KI+ + G LK
Sbjct: 15 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 74
Query: 57 QECEIQKHLAHPNIIKFIASHETLNEFVLITEF 89
+E I L HP+I++ + ++ + ++ EF
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEF 107
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 19/281 (6%)
Query: 111 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 166
M + E ++C +IG+G F V + I+ + + A+KI+ + G LK
Sbjct: 17 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 76
Query: 167 QECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNL-LEQRKK------LSETIC 219
+E I L HP+I++ + ++ + ++ EF M ++L E K+ SE +
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEF--MDGADLCFEIVKRADAGFVYSEAVA 134
Query: 220 VQILSNLISALYYLHSNRVLHRDLKPQNVLL-NKDGVAMLCDFGFARSMAVGTHMLTSIK 278
+ ++ AL Y H N ++HRD+KP VLL +K+ A + GF ++ +G L +
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 279 --GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF 336
GTP +MAPE++ PY D+W G I + + G PF ++K +
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 254
Query: 337 PSQ---VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN 374
P Q +SE+ KDLV+ +L D ++R++ E L+HP +K+
Sbjct: 255 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 295
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 1 MEKSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISK---SGRSGKELSSLK 56
M + E ++C +IG+G F V + I+ + + A+KI+ + G LK
Sbjct: 17 MADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK 76
Query: 57 QECEIQKHLAHPNIIKFIASHETLNEFVLITEF 89
+E I L HP+I++ + ++ + ++ EF
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEF 109
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 18/255 (7%)
Query: 125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
++G+G++G V+ L + +A+K I + R + L +E + KHL H NI++++
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 185 ASHETLNEFV--LITEFAHMSLSNLLEQR----KKLSETICVQILSNLISALYYLHSNRV 238
S + N F+ + + SLS LL + K +TI ++ L YLH N++
Sbjct: 72 GSF-SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT-KQILEGLKYLHDNQI 129
Query: 239 LHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP--YD 295
+HRD+K NVL+N GV + DFG ++ +A + GT YMAPE+I + P Y
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 296 HTADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGL 351
AD+WSLGC E+ G PPF + + + + + K P +S K +
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP-EIPESMSAEAKAFILKC 248
Query: 352 LEKDASQRLSWPELL 366
E D +R +LL
Sbjct: 249 FEPDPDKRACANDLL 263
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 15 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 74
++G+G++G V+ L + +A+K I + R + L +E + KHL H NI++++
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPE--RDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 75 ASHETLNEFVLI 86
S + N F+ I
Sbjct: 72 GSF-SENGFIKI 82
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 19/285 (6%)
Query: 116 GALEKY---QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ 172
GA+ + K ++G G FG+V K +A KII G KE +K E +
Sbjct: 83 GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE--EVKNEISVM 140
Query: 173 KHLAHPNIIKFIASHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISAL 230
L H N+I+ + E+ N+ VL+ E+ ++++ L+E + + + +
Sbjct: 141 NQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGI 200
Query: 231 YYLHSNRVLHRDLKPQNVL-LNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
++H +LH DLKP+N+L +N+D + + DFG AR + + GTP ++APE+
Sbjct: 201 RHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPEV 259
Query: 289 IAERPYDHTADLWSLGCIAYEIHMGHPPF------KTVSILHLIRLLKTQDVTFPSQVSE 342
+ D+WS+G IAY + G PF +T++ + R +D F +SE
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR-WDLEDEEF-QDISE 317
Query: 343 TYKDLVKGLLEKDASQRLSWPELLHHPLVKDN-LSSEIESQNNQD 386
K+ + LL K+ S R+S E L HP + D+ L S + +Q ++
Sbjct: 318 EAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLSAQKKKN 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 6 GALEKY---QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ 62
GA+ + K ++G G FG+V K +A KII G KE +K E +
Sbjct: 83 GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE--EVKNEISVM 140
Query: 63 KHLAHPNIIKFIASHETLNEFVLITEF 89
L H N+I+ + E+ N+ VL+ E+
Sbjct: 141 NQLDHANLIQLYDAFESKNDIVLVMEY 167
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 17/268 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 179 NIIKF---IASHETLNEFVLITEFAHMSLSNLL----EQRKKLSETICVQILSNLISALY 231
NI+++ I ++++ L++++ ++R+ L E +++++ L AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 232 YLH-----SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAP 286
H + VLHRDLKP NV L+ L DFG AR + GTP YM+P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP 185
Query: 287 ELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL---IRLLKTQDVTFPSQVSET 343
E + Y+ +D+WSLGC+ YE+ PPF S L IR K + + P + S+
Sbjct: 186 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDE 243
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLV 371
+++ +L R S E+L +PL+
Sbjct: 244 LNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E Y+ + IG GS+G+ K K + K + + E L E + + L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 69 NIIKF 73
NI+++
Sbjct: 66 NIVRY 70
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 17/270 (6%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH-- 174
++ ++ I ++G+GSFGKV A + A+K++ K L EC + +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKD----VILQDDDVECTMTEKRI 76
Query: 175 --LA--HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISA 229
LA HP + + +T + + EF + L +++ ++ E + +ISA
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
L +LH +++RDLK NVLL+ +G L DFG + + GTP Y+APE++
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL 196
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
E Y D W++G + YE+ GH PF+ + L + +V +P+ + E ++K
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILK 256
Query: 350 GLLEKDASQRL------SWPELLHHPLVKD 373
+ K+ + RL +L HP K+
Sbjct: 257 SFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 40/317 (12%)
Query: 83 FVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLD 142
F+ ++ + +GE WF + ++G G FG+VF
Sbjct: 168 FLRFLQWKWLEAQPMGEDWFLD-------------------FRVLGRGGFGEVFAC---Q 205
Query: 143 LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS----HETLNEFVLITE 198
+K T L K + + Q ++K + +FI S ET + L+
Sbjct: 206 MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT 265
Query: 199 FAHMS-----LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD 253
+ + N+ E E + + ++S L +LH +++RDLKP+NVLL+ D
Sbjct: 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
Query: 254 GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG 313
G + D G A + G GTP +MAPEL+ YD + D ++LG YE+
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 314 HPPFKT----VSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPE----- 364
PF+ V L + + Q VT+P + S KD + LL+KD +RL + +
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG 445
Query: 365 LLHHPLVKDNLSSEIES 381
L HPL +D ++E+
Sbjct: 446 LRTHPLFRDISWRQLEA 462
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 40/317 (12%)
Query: 83 FVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLD 142
F+ ++ + +GE WF + ++G G FG+VF
Sbjct: 168 FLRFLQWKWLEAQPMGEDWFLD-------------------FRVLGRGGFGEVFAC---Q 205
Query: 143 LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS----HETLNEFVLITE 198
+K T L K + + Q ++K + +FI S ET + L+
Sbjct: 206 MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT 265
Query: 199 FAHMS-----LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD 253
+ + N+ E E + + ++S L +LH +++RDLKP+NVLL+ D
Sbjct: 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
Query: 254 GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG 313
G + D G A + G GTP +MAPEL+ YD + D ++LG YE+
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 314 HPPFKT----VSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPE----- 364
PF+ V L + + Q VT+P + S KD + LL+KD +RL + +
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG 445
Query: 365 LLHHPLVKDNLSSEIES 381
L HPL +D ++E+
Sbjct: 446 LRTHPLFRDISWRQLEA 462
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 40/317 (12%)
Query: 83 FVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLD 142
F+ ++ + +GE WF + ++G G FG+VF
Sbjct: 168 FLRFLQWKWLEAQPMGEDWFLD-------------------FRVLGRGGFGEVFAC---Q 205
Query: 143 LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS----HETLNEFVLITE 198
+K T L K + + Q ++K + +FI S ET + L+
Sbjct: 206 MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMT 265
Query: 199 FAHMS-----LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD 253
+ + N+ E E + + ++S L +LH +++RDLKP+NVLL+ D
Sbjct: 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD 325
Query: 254 GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG 313
G + D G A + G GTP +MAPEL+ YD + D ++LG YE+
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 314 HPPFKT----VSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPE----- 364
PF+ V L + + Q VT+P + S KD + LL+KD +RL + +
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDG 445
Query: 365 LLHHPLVKDNLSSEIES 381
L HPL +D ++E+
Sbjct: 446 LRTHPLFRDISWRQLEA 462
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 182
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 183 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 300
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 182
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 183 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 300
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 17 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 135
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 136 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 194
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 253
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 254 LKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNIIKFIA 185
IG GS+ + IH A+KII KS R E E EI ++ HPNII
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE------EIEILLRYGQHPNIITLKD 83
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
++ ++TE L +L Q K SE +L + + YLH+ V+HRDL
Sbjct: 84 VYDDGKYVYVVTELXKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 244 KPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTA 298
KP N+L N + + +CDFGFA+ + +L + T ++APE++ + YD
Sbjct: 143 KPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAAC 201
Query: 299 DLWSLGCIAYEIHMGHPPFKTVS------ILHLIRLLK-TQDVTFPSQVSETYKDLVKGL 351
D+WSLG + Y G+ PF IL I K + + + VS+T KDLV
Sbjct: 202 DIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKX 261
Query: 352 LEKDASQRLSWPELLHHPLV 371
L D QRL+ +L HP +
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIA 75
IG GS+ + IH A+KII KS R E E EI ++ HPNII
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE------EIEILLRYGQHPNIITLKD 83
Query: 76 SHETLNEFVLITEFAHMSLSKLGE 99
++ ++TE L K GE
Sbjct: 84 VYDDGKYVYVVTE-----LXKGGE 102
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 36 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 154
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 155 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 272
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 273 LKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI--QKHL 175
L + + ++G+GSFGKV A ++ A+KI+ K + EC + ++ L
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKD----VVIQDDDVECTMVEKRVL 73
Query: 176 A----HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
A P + + + +T++ + E+ + L ++Q K E V + + L
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGL 133
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++LH +++RDLK NV+L+ +G + DFG + + GTP Y+APE+IA
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIA 193
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+PY + D W+ G + YE+ G PPF L + + +V++P +S+ + KG
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKG 253
Query: 351 LLEKDASQRLS 361
L+ K ++RL
Sbjct: 254 LMTKHPAKRLG 264
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 20 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 79 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 138
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 139 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 197
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 198 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 256
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 257 LKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 16 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 134
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S GT YM PE I +
Sbjct: 135 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 193
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 194 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 252
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 253 LKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 25/304 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ + IG G+FG + VA+K I R K +++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHP 75
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHS 235
NI++F T ++ E+A S L E+ + SE LIS + Y H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 NRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+V HRDLK +N LL+ L CDFG+++S + + +++ GTP Y+APE++ ++
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKE 192
Query: 294 YD-HTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVTFPSQV--SET 343
YD AD+WS G Y + +G PF+ +H R+L Q P V S
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH--RILNVQ-YAIPDYVHISPE 249
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRKSI 403
+ L+ + D ++R+S PE+ +H NL +++ + N FD D+ S + I
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTM-TTQFDESDQPGQSIEEI 308
Query: 404 TTIV 407
I+
Sbjct: 309 MQII 312
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ + IG G+FG + VA+K I R K +++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHP 75
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NI++F T ++ E+A
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA 97
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 18/293 (6%)
Query: 101 WFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK 160
W + QPV++ K + L+ Y +G G+FG V + A K + S K
Sbjct: 34 WKQYYPQPVEI-KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 92
Query: 161 ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLE----QRKKLSE 216
E ++++E + L HP ++ + E NE V+I EF MS L E + K+SE
Sbjct: 93 E--TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF--MSGGELFEKVADEHNKMSE 148
Query: 217 TICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN--KDGVAMLCDFGFARSMAVGTHML 274
V+ + + L ++H N +H DLKP+N++ + L DFG + +
Sbjct: 149 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--- 331
+ GT + APE+ +P + D+WS+G ++Y + G PF + +R +K+
Sbjct: 209 VTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 267
Query: 332 --QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQ 382
D F S +SE KD ++ LL D + R++ + L HP + + +SQ
Sbjct: 268 NMDDSAF-SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ 319
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G+FG V + A K + S KE ++++E + L HP ++ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE--TVRKEIQTMSVLRHPTLVNLHDA 116
Query: 77 HETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVF 136
E NE V+I EF MS +L E H + + E + + +C + E ++
Sbjct: 117 FEDDNEMVMIYEF--MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---- 170
Query: 137 KAIHLDLK 144
+HLDLK
Sbjct: 171 --VHLDLK 176
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 18/293 (6%)
Query: 101 WFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK 160
W + QPV++ K + L+ Y +G G+FG V + A K + S K
Sbjct: 140 WKQYYPQPVEI-KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK 198
Query: 161 ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLE----QRKKLSE 216
E ++++E + L HP ++ + E NE V+I EF MS L E + K+SE
Sbjct: 199 E--TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF--MSGGELFEKVADEHNKMSE 254
Query: 217 TICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN--KDGVAMLCDFGFARSMAVGTHML 274
V+ + + L ++H N +H DLKP+N++ + L DFG + +
Sbjct: 255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--- 331
+ GT + APE+ +P + D+WS+G ++Y + G PF + +R +K+
Sbjct: 315 VTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 373
Query: 332 --QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQ 382
D F S +SE KD ++ LL D + R++ + L HP + + +SQ
Sbjct: 374 NMDDSAF-SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ 425
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G+FG V + A K + S KE ++++E + L HP ++ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE--TVRKEIQTMSVLRHPTLVNLHDA 222
Query: 77 HETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVF 136
E NE V+I EF MS +L E H + + E + + +C + E ++
Sbjct: 223 FEDDNEMVMIYEF--MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY---- 276
Query: 137 KAIHLDLK 144
+HLDLK
Sbjct: 277 --VHLDLK 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHL- 175
+E ++ ++G+GSFGKVF A + KKT I K+ + L EC ++K +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLA---EFKKTNQFFAI-KALKKDVVLMDDDVECTMVEKRVL 72
Query: 176 ----AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
HP + + +T + E+ + L ++ K + + +I L
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS +++RDLK N+LL+KDG + DFG + +G GTP Y+APE++
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL 192
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+ Y+H+ D WS G + YE+ +G PF L ++ + +P + + KDL+
Sbjct: 193 GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK 252
Query: 351 LLEKDASQRLS-WPELLHHPLVKDNLSSEIESQ 382
L ++ +RL ++ HPL ++ E+E +
Sbjct: 253 LFVREPEKRLGVRGDIRQHPLFREINWEELERK 285
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 36 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 154
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M + S GT YM PE I +
Sbjct: 155 PANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 272
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 273 LKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQE-CEIQKHLAHPNIIKFIA 185
IG G KVF+ ++ + K+ A+K ++ + L S + E + K H + I +
Sbjct: 64 IGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 186 SHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+E ++++ ++ E ++ L++ L+++K + N++ A++ +H + ++H DLK
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLK 182
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYMAPELIAERPYDH------ 296
P N L+ DG+ L DFG A M T + S G YM PE I +
Sbjct: 183 PANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSK 241
Query: 297 -----TADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKDL 347
+D+WSLGCI Y + G PF+ + S LH I + ++ FP + +D+
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDV 300
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+K L++D QR+S PELL HP V+
Sbjct: 301 LKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 28/289 (9%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE-LSSLKQECEIQKHLAH 177
E+Y+ + +G G V+ A L VA+K I R +E L ++E L+H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 178 PNIIKFIASHETLNEFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
NI+ I E + + L+ E+ +LS +E LS + + ++ + + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS-IKGTPLYMAPELIAERPYD 295
R++HRD+KPQN+L++ + + DFG A++++ + T+ + GT Y +PE D
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 296 HTADLWSLGCIAYEIHMGHPPFK-----TVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
D++S+G + YE+ +G PPF +++I H+ QD + P+ ++ KD+ +
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI------QD-SVPNVTTDVRKDIPQS 243
Query: 351 L-------LEKDASQRLSWPELLHHPLVKDNLSSEI-ESQNNQDCIGFD 391
L EKD + R + + KD+LSS + E++ N+D D
Sbjct: 244 LSNVILRATEKDKANRYKTIQEM-----KDDLSSVLHENRANEDVYELD 287
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE-LSSLKQECEIQKHLAH 67
E+Y+ + +G G V+ A L VA+K I R +E L ++E L+H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 68 PNIIKFIASHETLNEFVLITEF 89
NI+ I E + + L+ E+
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEY 92
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHL-----AHPN 179
++G+GSFGKVF A + KKT I K+ + L EC ++K + HP
Sbjct: 24 MLGKGSFGKVFLA---EFKKTNQFFAI-KALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 180 IIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+ + +T + E+ + L ++ K + + +I L +LHS +
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTA 298
++RDLK N+LL+KDG + DFG + +G GTP Y+APE++ + Y+H+
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSV 199
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
D WS G + YE+ +G PF L ++ + +P + + KDL+ L ++ +
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEK 259
Query: 359 RLS-WPELLHHPLVKDNLSSEIESQ 382
RL ++ HPL ++ E+E +
Sbjct: 260 RLGVRGDIRQHPLFREINWEELERK 284
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 33/285 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E Y K+ +GEG++ V+K VALK I G ++++ E + K L H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKH 59
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQI-LSNLISALYYLHSN 236
NI+ T L+ E+ L L+ + V++ L L+ L Y H
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE-LIAERPYD 295
+VLHRDLKPQN+L+N+ G L DFG AR+ ++ T + T Y P+ L+ Y
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 296 HTADLWSLGCIAYEIHMGHPPFKTVSI---LHLI-RLLKT-QDVTFPSQVS----ETYK- 345
D+W +GCI YE+ G P F ++ LH I R+L T + T+P +S +TY
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 346 --------------------DLVKGLLEKDASQRLSWPELLHHPL 370
DL+ LL+ + R+S + + HP
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E Y K+ +GEG++ V+K VALK I G ++++ E + K L H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKH 59
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSK 96
NI+ T L+ E+ L +
Sbjct: 60 ANIVTLHDIIHTEKSLTLVFEYLDKDLKQ 88
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 24/262 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKS---GRSGKELSSLKQECEIQKHLAHPNIIKF 183
+G G+FG V HL +++ L+ + K+ RS + ++ E E+ K L HPNIIK
Sbjct: 30 LGSGAFGDV----HLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQ-------RKKLSETICVQILSNLISALYYLHSN 236
E + ++ E LLE+ K LSE +++ +++AL Y HS
Sbjct: 86 FEVFEDYHNMYIVMETCEGG--ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 237 RVLHRDLKPQNVLLNKD---GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
V+H+DLKP+N+L + DFG A H T+ GT LYMAPE+ +R
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEVF-KRD 201
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ---VSETYKDLVKG 350
D+WS G + Y + G PF S+ + + ++ + + ++ DL+K
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQ 261
Query: 351 LLEKDASQRLSWPELLHHPLVK 372
+L KD +R S ++LHH K
Sbjct: 262 MLTKDPERRPSAAQVLHHEWFK 283
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKS---GRSGKELSSLKQECEIQKHLAHPNIIKF 73
+G G+FG V HL +++ L+ + K+ RS + ++ E E+ K L HPNIIK
Sbjct: 30 LGSGAFGDV----HLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 74 IASHETLNEFVLITE 88
E + ++ E
Sbjct: 86 FEVFEDYHNMYIVME 100
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 139/279 (49%), Gaps = 28/279 (10%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK + ++ ++E E+
Sbjct: 55 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVEL 107
Query: 172 QKHLAH-PNIIKFIASHETLNE----FVLITE-FAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ E L + ++ R + +E +I
Sbjct: 108 HWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIX 167
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+ + LT+ T
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYT 226
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
P Y+APE++ YD + D WSLG I Y + G+PPF + L + KT+ F
Sbjct: 227 PYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEF 286
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR + E +HP +
Sbjct: 287 PNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G+ V A K+ VA+K I+ + + L +E + HPNI+ +
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 186 SHETLNEFVLITEFAHMSLSNLLE-----------QRKKLSETICVQILSNLISALYYLH 234
S +E L+ + +S ++L+ + L E+ IL ++ L YLH
Sbjct: 81 SFVVKDELWLVMKL--LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML-----TSIKGTPLYMAPELI 289
N +HRD+K N+LL +DG + DFG + +A G + + GTP +MAPE++
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 290 AE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRL--------LKT--QDVTFPS 338
+ R YD AD+WS G A E+ G P+ + ++ L L+T QD
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 258
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHH 368
+ ++++ ++ L+KD +R + ELL H
Sbjct: 259 KYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 30/270 (11%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G+ V A K+ VA+K I+ + + L +E + HPNI+ +
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 186 SHETLNEFVLITEFAHMSLSNLLE-----------QRKKLSETICVQILSNLISALYYLH 234
S +E L+ + +S ++L+ + L E+ IL ++ L YLH
Sbjct: 76 SFVVKDELWLVMKL--LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 133
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML-----TSIKGTPLYMAPELI 289
N +HRD+K N+LL +DG + DFG + +A G + + GTP +MAPE++
Sbjct: 134 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 290 AE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRL--------LKT--QDVTFPS 338
+ R YD AD+WS G A E+ G P+ + ++ L L+T QD
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLK 253
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHH 368
+ ++++ ++ L+KD +R + ELL H
Sbjct: 254 KYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 4/253 (1%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+G G+FGKV H VA+KI+++ RS + +++E + K HP+IIK
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
T ++ ++ E+ + L + + + +L E ++ ++S + Y H + V+HRDLK
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY-DHTADLWSL 303
P+NVLL+ A + DFG + M+ G + S G+P Y APE+I+ R Y D+WS
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-GSPNYAAPEVISGRLYAGPEVDIWSS 202
Query: 304 GCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWP 363
G I Y + G PF + L + + P ++ + L+K +L+ D +R +
Sbjct: 203 GVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIK 262
Query: 364 ELLHHPLVKDNLS 376
++ H K +L
Sbjct: 263 DIREHEWFKQDLP 275
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIA 75
+G G+FGKV H VA+KI+++ RS + +++E + K HP+IIK
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 76 SHETLNEFVLITEFA 90
T ++ ++ E+
Sbjct: 84 VISTPSDIFMVMEYV 98
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 15/292 (5%)
Query: 101 WFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK 160
W QPV++ K + Y + +G G+FG V + + + K I+ K
Sbjct: 34 WKKYVPQPVEV-KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK 92
Query: 161 ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMS--LSNLLEQRKKLSETI 218
++K E I L HP +I + E E VLI EF + + K+SE
Sbjct: 93 --YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE 150
Query: 219 CVQILSNLISALYYLHSNRVLHRDLKPQNVL--LNKDGVAMLCDFGFARSMAVGTHMLTS 276
+ + L ++H + ++H D+KP+N++ K + DFG A + ++
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKV 209
Query: 277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF 336
T + APE++ P D+W++G + Y + G PF L ++ +K D F
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK---DNLSSEIES 381
S VS KD +K LL+K+ +RL+ + L HP +K NL+S I S
Sbjct: 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPS 321
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 1 MEKSNGALEKYQKICL-IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQEC 59
+E G++ Y I +G G+FG V + + + K I+ K ++K E
Sbjct: 42 VEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK--YTVKNEI 99
Query: 60 EIQKHLAHPNIIKFIASHETLNEFVLITEF 89
I L HP +I + E E VLI EF
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEF 129
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 24/280 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 74
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHS 235
NI++F T ++ E+A S L E+ + SE LIS + Y H+
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 236 NRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+V HRDLK +N LL+ L CDFG+++S + + +++ GTP Y+APE++ ++
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKE 191
Query: 294 YD-HTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVTFPSQV--SET 343
YD AD+WS G Y + +G PF+ +H R+L Q P V S
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH--RILNVQ-YAIPDYVHISPE 248
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQN 383
+ L+ + D ++R+S PE+ +H NL +++ + N
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDN 288
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 74
Query: 69 NIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIG 128
NI++F T ++ E+A G F C + + Q LI
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYAS------GGELFERICNAGRFSEDEARFFFQQ---LIS 125
Query: 129 EGSFGKVFKAIHLDLK 144
S+ + H DLK
Sbjct: 126 GVSYCHAMQVCHRDLK 141
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V + IH D + VA+K + S K E +I K L HPN++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 187 HETLNEF------VLITEFAHMS-LSNLLEQRKK---LSETICVQILSNLISALYYLHSN 236
+ L + +L E+ L L Q + L E +LS++ SAL YLH N
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 237 RVLHRDLKPQNVLLNKDGVAM---LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
R++HRDLKP+N++L + + D G+A+ + G + T GT Y+APEL+ ++
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLEQKK 200
Query: 294 YDHTADLWSLGCIAYEIHMGHPPF 317
Y T D WS G +A+E G PF
Sbjct: 201 YTVTVDYWSFGTLAFECITGFRPF 224
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+G G FG V + IH D + VA+K + S K E +I K L HPN++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVV 76
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V + IH D + VA+K + S K E +I K L HPN++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 187 HETLNEF------VLITEFAHMS-LSNLLEQRKK---LSETICVQILSNLISALYYLHSN 236
+ L + +L E+ L L Q + L E +LS++ SAL YLH N
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 237 RVLHRDLKPQNVLLNKDGVAM---LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
R++HRDLKP+N++L + + D G+A+ + G + T GT Y+APEL+ ++
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLEQKK 199
Query: 294 YDHTADLWSLGCIAYEIHMGHPPF 317
Y T D WS G +A+E G PF
Sbjct: 200 YTVTVDYWSFGTLAFECITGFRPF 223
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+G G FG V + IH D + VA+K + S K E +I K L HPN++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVV 75
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 145/304 (47%), Gaps = 25/304 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHS 235
NI++F T ++ E+A S L E+ + SE LIS + Y H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 NRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+V HRDLK +N LL+ L C FG+++S + + +++ GTP Y+APE++ ++
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKE 192
Query: 294 YD-HTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVTFPSQV--SET 343
YD AD+WS G Y + +G PF+ +H R+L Q P V S
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH--RILNVQ-YAIPDYVHISPE 249
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRKSI 403
+ L+ + D ++R+S PE+ +H NL +++ + N FD D+ S + I
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTM-TTQFDESDQPGQSIEEI 308
Query: 404 TTIV 407
I+
Sbjct: 309 MQII 312
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NI++F T ++ E+A
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA 97
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 186 SHETLNEFVLITE-------FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+ T + ++T+ + H+ S + KKL + I + YLH+ +
Sbjct: 88 -YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKSI 141
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERP 293
+HRDLK N+ L++D + DFG A +S G+H + G+ L+MAPE+I P
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLI-RLLKTQDVT-FPSQVSETYKDL 347
Y +D+++ G + YE+ G P+ ++ I+ ++ R + D++ S + K L
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261
Query: 348 VKGLLEKDASQRLSWPELL 366
+ L+K +R S+P +L
Sbjct: 262 MAECLKKKRDERPSFPRIL 280
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 88 -YSTAPQLAIVTQW 100
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 11/251 (4%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI--QKHL 175
L + + ++G+GSFGKV + + A+KI+ K + EC + ++ L
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD----VVIQDDDVECTMVEKRVL 395
Query: 176 AHPNIIKFIAS----HETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
A P F+ +T++ + E+ + L ++Q + E V + + L
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 455
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++L S +++RDLK NV+L+ +G + DFG + GTP Y+APE+IA
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 515
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+PY + D W+ G + YE+ G PF+ L + + +V +P +S+ + KG
Sbjct: 516 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKG 575
Query: 351 LLEKDASQRLS 361
L+ K +RL
Sbjct: 576 LMTKHPGKRLG 586
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 145/304 (47%), Gaps = 25/304 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHS 235
NI++F T ++ E+A S L E+ + SE LIS + Y H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 236 NRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+V HRDLK +N LL+ L DFG++++ + + +++ GTP Y+APE++ ++
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-GTPAYIAPEVLLKKE 192
Query: 294 YD-HTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVTFPSQV--SET 343
YD AD+WS G Y + +G PF+ +H R+L Q P V S
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH--RILNVQ-YAIPDYVHISPE 249
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRKSI 403
+ L+ + D ++R+S PE+ +H NL +++ + N FD D+ S + I
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTM-TTQFDESDQPGQSIEEI 308
Query: 404 TTIV 407
I+
Sbjct: 309 MQII 312
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 12/136 (8%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 69 NIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIG 128
NI++F T ++ E+A G F C + + Q LI
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYAS------GGELFERICNAGRFSEDEARFFFQQ---LIS 126
Query: 129 EGSFGKVFKAIHLDLK 144
S+ + H DLK
Sbjct: 127 GVSYAHAMQVAHRDLK 142
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 11/251 (4%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI--QKHL 175
L + + ++G+GSFGKV + + A+KI+ K + EC + ++ L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD----VVIQDDDVECTMVEKRVL 74
Query: 176 AHPNIIKFIAS----HETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
A P F+ +T++ + E+ + L ++Q + E V + + L
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL 134
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++L S +++RDLK NV+L+ +G + DFG + GTP Y+APE+IA
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG 350
+PY + D W+ G + YE+ G PF+ L + + +V +P +S+ + KG
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKG 254
Query: 351 LLEKDASQRLS 361
L+ K +RL
Sbjct: 255 LMTKHPGKRLG 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 186 SHETLNEFVLITE-------FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+ T + ++T+ + H+ S + KKL + I + YLH+ +
Sbjct: 88 -YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKSI 141
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERP 293
+HRDLK N+ L++D + DFG A +S G+H + G+ L+MAPE+I P
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLI-RLLKTQDVT-FPSQVSETYKDL 347
Y +D+++ G + YE+ G P+ ++ I+ ++ R + D++ S + K L
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261
Query: 348 VKGLLEKDASQRLSWPELL 366
+ L+K +R S+P +L
Sbjct: 262 MAECLKKKRDERPSFPRIL 280
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 32 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 88 -YSTKPQLAIVTQW 100
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 134/271 (49%), Gaps = 18/271 (6%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V +A H VA+KI+ + + ++ +E I K L HPNI+ F+
Sbjct: 45 IGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHSNR--VL 239
+ ++TE+ + SL LL + R++L E + + ++ + YLH+ ++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
HRDLK N+L++K +CDFG +R A GTP +MAPE++ + P + +D
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLL--KTQDVTFPSQVSETYKDLVKGLLEKDAS 357
++S G I +E+ P+ ++ ++ + K + + P ++ +++G +
Sbjct: 222 VYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPW 281
Query: 358 QRLSWPELLH--HPLVKDNLSSEIESQNNQD 386
+R S+ ++ PL+K S + N D
Sbjct: 282 KRPSFATIMDLLRPLIK----SAVPPPNRSD 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V +A H VA+KI+ + + ++ +E I K L HPNI+ F+
Sbjct: 45 IGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 76 SHETLNEFVLITEF 89
+ ++TE+
Sbjct: 102 AVTQPPNLSIVTEY 115
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 131/259 (50%), Gaps = 29/259 (11%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 20 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 186 SHETLNEFVLITE-------FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV 238
+ T + ++T+ + H+ S + KKL + I + YLH+ +
Sbjct: 76 -YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLHAKSI 129
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERP 293
+HRDLK N+ L++D + DFG A +S G+H + G+ L+MAPE+I P
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLI-RLLKTQDVT-FPSQVSETYKDL 347
Y +D+++ G + YE+ G P+ ++ I+ ++ R + D++ S + K L
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 249
Query: 348 VKGLLEKDASQRLSWPELL 366
+ L+K +R S+P +L
Sbjct: 250 MAECLKKKRDERPSFPRIL 268
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 20 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 76 -YSTKPQLAIVTQW 88
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 144/304 (47%), Gaps = 25/304 (8%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHS 235
NI++F T ++ E+A S L E+ + SE LIS + Y H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA--SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 NRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERP 293
+V HRDLK +N LL+ L C FG+++S + + ++ GTP Y+APE++ ++
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV-GTPAYIAPEVLLKKE 192
Query: 294 YD-HTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVTFPSQV--SET 343
YD AD+WS G Y + +G PF+ +H R+L Q P V S
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH--RILNVQ-YAIPDYVHISPE 249
Query: 344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRKSI 403
+ L+ + D ++R+S PE+ +H NL +++ + N FD D+ S + I
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTM-TTQFDESDQPGQSIEEI 308
Query: 404 TTIV 407
I+
Sbjct: 309 MQII 312
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ + IG G+FG + VA+K I R K ++K+E + L HP
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHP 75
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NI++F T ++ E+A
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYA 97
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E +E L+T L+N+++ + LS+ ++ L+ L Y
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQLLRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP NV +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ---ADEEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFP-------SQVSET 343
Y+ T D+WS+GCI E+ G F I L R+++ P S+ + T
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 344 YKDLVKGLLEKDAS 357
Y + + +KD S
Sbjct: 264 YIQSLPPMPQKDLS 277
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E +E L+T L+ +
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI 122
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 38/283 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFI 184
++GEG+ +V I+L + A+KII K + G S + +E E + + H N+++ I
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 185 ASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E + F L+ E S+ + + +R+ +E ++ ++ SAL +LH+ + HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 244 KPQNVLL---NKDGVAMLCDFGFARSM-------AVGTHMLTSIKGTPLYMAPELIAERP 293
KP+N+L N+ +CDFG + + T L + G+ YMAPE++
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 294 -----YDHTADLWSLGCIAYEIHMGHPPFK---------------TVSILHLIRLLKTQD 333
YD DLWSLG I Y + G+PPF L ++
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 334 VTFP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
FP + +S KDL+ LL +DA QRLS ++L HP V+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 135/271 (49%), Gaps = 18/271 (6%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V +A H VA+KI+ + + ++ +E I K L HPNI+ F+
Sbjct: 45 IGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 186 SHETLNEFVLITEF-AHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLHSNR--VL 239
+ ++TE+ + SL LL + R++L E + + ++ + YLH+ ++
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTAD 299
HR+LK N+L++K +CDFG +R A S GTP +MAPE++ + P + +D
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 300 LWSLGCIAYEIHMGHPPFKTVSILHLIRLL--KTQDVTFPSQVSETYKDLVKGLLEKDAS 357
++S G I +E+ P+ ++ ++ + K + + P ++ +++G +
Sbjct: 222 VYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPW 281
Query: 358 QRLSWPELLH--HPLVKDNLSSEIESQNNQD 386
+R S+ ++ PL+K S + N D
Sbjct: 282 KRPSFATIMDLLRPLIK----SAVPPPNRSD 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V +A H VA+KI+ + + ++ +E I K L HPNI+ F+
Sbjct: 45 IGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 76 SHETLNEFVLITEF 89
+ ++TE+
Sbjct: 102 AVTQPPNLSIVTEY 115
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 42/322 (13%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y+ + +G G++G V A+ VA+K + + +S +E + KH+ H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 181 IKFI---ASHETLNEFV---LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
I + ETL++F L+ F L L++ +KL E ++ ++ L Y+H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE-RP 293
+ ++HRDLKP N+ +N+D + DFG AR + M + T Y APE+I
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ--ADSEMXGXVV-TRWYRAPEVILNWMR 202
Query: 294 YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQV-----SETYKDLV 348
Y T D+WS+GCI E+ G FK L ++ + T P++ S+ K+ +
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM 262
Query: 349 KGL--LEK------------------------DASQRLSWPELLHHPLVKDNLSSEIESQ 382
KGL LEK DA QR++ E L HP + +E E Q
Sbjct: 263 KGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQ 322
Query: 383 NNQDCIGFDYCDKRRGSRKSIT 404
+ FD D+ K +T
Sbjct: 323 VQKYDDSFDDVDRTLDEWKRVT 344
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y+ + +G G++G V A+ VA+K + + +S +E + KH+ H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 71 IKFI---ASHETLNEFV---LITEFAHMSLSKL 97
I + ETL++F L+ F L KL
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKL 119
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 16/292 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G+ V++ +K ALK++ K+ + ++ E + L+HPNIIK
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 187 HETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKP 245
ET E L+ E L + + ++ SE + ++ A+ YLH N ++HRDLKP
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKP 176
Query: 246 QNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
+N+L D + DFG ++ + ++ ++ GTP Y APE++ Y D+WS
Sbjct: 177 ENLLYATPAPDAPLKIADFGLSK-IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWS 235
Query: 303 LGCIAYEIHMGHPPF-KTVSILHLIRLLKTQDVTFPS----QVSETYKDLVKGLLEKDAS 357
+G I Y + G PF + R + + F S +VS KDLV+ L+ D
Sbjct: 236 VGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPK 295
Query: 358 QRLSWPELLHHPLVKDNLSSEIESQNNQDCIGFDYCDKRRGSRKSITTIVES 409
+RL+ + L HP V ++ + Q + + RR + ++ +V S
Sbjct: 296 KRLTTFQALQHPWVTGKAANFVHMDTAQKKL--QEFNARRKLKAAVKAVVAS 345
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G+ V++ +K ALK++ K+ + ++ E + L+HPNIIK
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 77 HETLNEFVLITEF 89
ET E L+ E
Sbjct: 117 FETPTEISLVLEL 129
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR A +T T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVATRWYRAPEIMLNW 204
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 347 LVKGLLE 353
++ L +
Sbjct: 265 YIQSLTQ 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 123
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KXQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR A +T T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVATRWYRAPEIMLNW 204
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 347 LVKGLLE 353
++ L +
Sbjct: 265 YIQSLTQ 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 123
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR A +T T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA---DEMTGYVATRWYRAPEIMLNW 204
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 347 LVKGLLE 353
++ L +
Sbjct: 265 YIQSLTQ 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 123
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E +E L+T L+N++ + + LS+ ++ L+ L Y
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP NV +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ---ADEEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFP-------SQVSET 343
Y+ T D+WS+GCI E+ G F I L R+++ P S+ + T
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 263
Query: 344 YKDLVKGLLEKDAS 357
Y + + +KD S
Sbjct: 264 YIQSLPPMPQKDLS 277
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E +E L+T L+ +
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI 122
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 134/259 (51%), Gaps = 14/259 (5%)
Query: 117 ALEKYQKICLIGEGSFGKVF---KAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEI 171
+E ++ + ++G G++GKVF K D K A+K++ K+ + K + E ++
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 172 QKHLAH-PNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISA 229
+H+ P ++ + +T + LI ++ + L L QR++ +E + ++ A
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS-MAVGTHMLTSIKGTPLYMAPEL 288
L +LH +++RD+K +N+LL+ +G +L DFG ++ +A T GT YMAP++
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 289 I--AERPYDHTADLWSLGCIAYEIHMGHPPF----KTVSILHLIRLLKTQDVTFPSQVSE 342
+ + +D D WSLG + YE+ G PF + S + R + + +P ++S
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 343 TYKDLVKGLLEKDASQRLS 361
KDL++ LL KD +RL
Sbjct: 292 LAKDLIQRLLMKDPKKRLG 310
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS----GKELSSLKQECEIQKH 174
++Y+K+ +GEG F V+KA + + VA+K I RS G ++L+ E ++ +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQE 68
Query: 175 LAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYL 233
L+HPNII + + + L+ +F L +++ L+ + + + L YL
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-AER 292
H + +LHRDLKP N+LL+++GV L DFG A+S T Y APEL+ R
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKT 331
Y D+W++GCI E+ + P S L L R+ +T
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET 228
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS----GKELSSLKQECEIQKH 64
++Y+K+ +GEG F V+KA + + VA+K I RS G ++L+ E ++ +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQE 68
Query: 65 LAHPNIIKFIASHETLNEFVLITEFAHMSL 94
L+HPNII + + + L+ +F L
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFMETDL 98
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KXQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 150
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 151 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 207
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 126
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + IG G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 145
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 202
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + IG G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 121
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 122
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 142
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 199
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E +E L+T L+N++ + + LS+ ++ L+ L Y
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKY 138
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAER 292
+HS ++HRDLKP NV +N+D + DFG AR +T T Y APE++
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ---ADEEMTGYVATRWYRAPEIMLNW 195
Query: 293 P-YDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFP-------SQVSET 343
Y+ T D+WS+GCI E+ G F I L R+++ P S+ + T
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHART 255
Query: 344 YKDLVKGLLEKDAS 357
Y + + +KD S
Sbjct: 256 YIQSLPPMPQKDLS 269
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++ Q + +G G++G V A L++ VA+K +S+ +S +E + KHL H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E +E L+T L+ +
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNI 114
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +SK +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 209
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 347 LVKGLLE 353
++ L +
Sbjct: 270 YIQSLTQ 276
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +SK +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI-- 184
+G G++G V AI + VA+K +S+ +S +E + KH+ H N+I +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 185 ----ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+S +F L+ F L ++ K SE ++ ++ L Y+HS V+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-AERPYDHTAD 299
RDLKP N+ +N+D + DFG AR +T T Y APE+I + Y+ T D
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 206
Query: 300 LWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKTQDVT----------------------- 335
+WS+GCI E+ G FK L L ++LK V
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 266
Query: 336 --------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQ 385
FP + S DL++ +LE D +RL+ + L HP + E E++ Q
Sbjct: 267 PRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQ 323
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI-- 74
+G G++G V AI + VA+K +S+ +S +E + KH+ H N+I +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 75 ----ASHETLNEFVLITEFAHMSLSKL 97
+S +F L+ F L K+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKI 118
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKE 282
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 78 CTREPPFYIITEF 90
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 145
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 202
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 121
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 61
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 62 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 112
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M GT
Sbjct: 113 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DEMANEFVGTR 170
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-FPSQV 340
YM+PE + Y +D+WS+G E+ +G P ++I L+ + + PS V
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAV 230
Query: 341 -SETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIE 380
S ++D V L K+ ++R +L+ H +K + + E++
Sbjct: 231 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 271
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 217
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 347 LVKGLLE 353
++ L +
Sbjct: 278 YIQSLAQ 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 151
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 208
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 127
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 159
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 216
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 347 LVKGLLE 353
++ L +
Sbjct: 277 YIQSLAQ 283
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 135
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSN---------LIS 228
NII + + +I E+A +L L+ R+ C N L+S
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 140 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 199
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 200 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 79
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 80 NIINLLGACTQDGPLYVIVEYA 101
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKE 282
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 78 CTREPPFYIITEF 90
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG R +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 193
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 347 LVKGLLE 353
++ L +
Sbjct: 254 YIQSLAQ 260
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 347 LVKGLLE 353
++ L +
Sbjct: 264 YIQSLAQ 270
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 122
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSN---------LIS 228
NII + + +I E+A +L L+ R+ C N L+S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 95 NIINLLGACTQDGPLYVIVEYA 116
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAER 292
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNA 197
Query: 293 P-YDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 83 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 261 RPSFAEIHQAFETMFQESSISDEVEKE 287
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 83 CTREPPFYIITEF 95
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 134/283 (47%), Gaps = 38/283 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLAHPNIIKFI 184
++GEG+ +V I+L + A+KII K + G S + +E E + + H N+++ I
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK--QPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 185 ASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E + F L+ E S+ + + +R+ +E ++ ++ SAL +LH+ + HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 244 KPQNVLL---NKDGVAMLCDFGFARSM-------AVGTHMLTSIKGTPLYMAPELIAERP 293
KP+N+L N+ +CDF + + T L + G+ YMAPE++
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 294 -----YDHTADLWSLGCIAYEIHMGHPPFK---------------TVSILHLIRLLKTQD 333
YD DLWSLG I Y + G+PPF L ++
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 334 VTFP----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
FP + +S KDL+ LL +DA QRLS ++L HP V+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 142
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 199
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 347 LVKGLLE 353
++ L +
Sbjct: 260 YIQSLTQ 266
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 147
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 148 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 204
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 264
Query: 347 LVKGLLE 353
++ L +
Sbjct: 265 YIQSLTQ 271
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 123
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 145
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 202
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 121
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 347 LVKGLLE 353
++ L +
Sbjct: 264 YIQSLTQ 270
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 122
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 142
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 199
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 139
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 140 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 196
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 115
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 151
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 152 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 208
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 268
Query: 347 LVKGLLE 353
++ L +
Sbjct: 269 YIQSLTQ 275
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 127
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 217
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 347 LVKGLLE 353
++ L +
Sbjct: 278 YIQSLTQ 284
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 142
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 143 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 199
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 259
Query: 347 LVKGLLE 353
++ L +
Sbjct: 260 YIQSLTQ 266
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 209
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 347 LVKGLLE 353
++ L +
Sbjct: 270 YIQSLTQ 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 152
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 153 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 209
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 269
Query: 347 LVKGLLE 353
++ L +
Sbjct: 270 YIQSLTQ 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI-- 184
+G G++G V AI + VA+K +S+ +S +E + KH+ H N+I +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 185 ----ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+S +F L+ F L ++ + SE ++ ++ L Y+HS V+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI-AERPYDHTAD 299
RDLKP N+ +N+D + DFG AR +T T Y APE+I + Y+ T D
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 224
Query: 300 LWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKTQDVT----------------------- 335
+WS+GCI E+ G FK L L ++LK V
Sbjct: 225 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 284
Query: 336 --------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQ 385
FP + S DL++ +LE D +RL+ + L HP + E E++ Q
Sbjct: 285 PRKDFTQLFP-RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQ 341
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI-- 74
+G G++G V AI + VA+K +S+ +S +E + KH+ H N+I +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 75 ----ASHETLNEFVLITEFAHMSLSKL 97
+S +F L+ F L K+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKI 136
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 163
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 220
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 280
Query: 347 LVKGLLE 353
++ L +
Sbjct: 281 YIQSLTQ 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 139
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 79 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 257 RPSFAEIHQAFETMFQESSISDEVEKE 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 79 CTREPPFYIITEF 91
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 147 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 203
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 263
Query: 347 LVKGLLE 353
++ L +
Sbjct: 264 YIQSLTQ 270
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 122
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 80 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKE 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 80 CTREPPFYIITEF 92
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 159
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 160 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 216
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 276
Query: 347 LVKGLLE 353
++ L +
Sbjct: 277 YIQSLTQ 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 135
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 137
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 194
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 113
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 145
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 146 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 202
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 262
Query: 347 LVKGLLE 353
++ L +
Sbjct: 263 YIQSLTQ 269
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 121
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAER 292
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 293 P-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 100 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 279 KKKRDERPLFPQIL 292
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 100 -YSTKPQLAIVTQW 112
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 100 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 278
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 279 KKKRDERPLFPQIL 292
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 100 -YSTKPQLAIVTQW 112
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 137
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 138 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 194
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 113
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 36 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 92 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 270
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 271 KKKRDERPLFPQIL 284
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 36 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 92 -YSTKPQLAIVTQW 104
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 72 -YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 251 KKKRDERPLFPQIL 264
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 72 -YSTAPQLAIVTQW 84
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 43 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 99 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 157
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 277
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 278 KKKRDERPLFPQIL 291
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 43 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 99 -YSTKPQLAIVTQW 111
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 206
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 207 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 86
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 87 NIINLLGACTQDGPLYVIVEYA 108
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 138
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 139 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 195
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 255
Query: 347 LVKGLLE 353
++ L +
Sbjct: 256 YIQSLTQ 262
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 114
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 193
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ KL++ ++ ++ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 193
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 347 LVKGLLE 353
++ L +
Sbjct: 254 YIQSLAQ 260
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 95 NIINLLGACTQDGPLYVIVEYA 116
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 83
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 203
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 204 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 83
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 84 NIINLLGACTQDGPLYVIVEYA 105
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 207
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 208 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 87
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 88 NIINLLGACTQDGPLYVIVEYA 109
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 77 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 256 KKKRDERPLFPQIL 269
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 77 -YSTKPQLAIVTQW 89
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 18 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 74 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 252
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 253 KKKRDERPLFPQIL 266
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 18 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 74 -YSTKPQLAIVTQW 86
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 77 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 255
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 256 KKKRDERPLFPQIL 269
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 21 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 77 -YSTKPQLAIVTQW 89
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 28/283 (9%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDL-KKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
++Y + IG G+FG V + + L K+ VA+K I + + ++++E + L H
Sbjct: 20 DRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRH 75
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQ---RKKLSETICVQILSNLISALYYLH 234
PNI++F T +I E+A S L E+ + SE L+S + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYA--SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 235 SNRVLHRDLKPQNVLLNKDGVAML--CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAER 292
S ++ HRDLK +N LL+ L CDFG+++S + + +++ GTP Y+APE++ +
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLRQ 192
Query: 293 PYD-HTADLWSLGCIAYEIHMGHPPF----------KTVSILHLIRLLKTQDVTFPSQVS 341
YD AD+WS G Y + +G PF KT+ + ++ D+ ++S
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI----RIS 248
Query: 342 ETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNN 384
L+ + D + R+S PE+ H NL +++ +++N
Sbjct: 249 PECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESN 291
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDL-KKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
++Y + IG G+FG V + + L K+ VA+K I + + ++++E + L H
Sbjct: 20 DRYDFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDE---NVQREIINHRSLRH 75
Query: 68 PNIIKFIASHETLNEFVLITEFA 90
PNI++F T +I E+A
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYA 98
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR + T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLAQ 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 72 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 251 KKKRDERPLFPQIL 264
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 72 -YSTKPQLAIVTQW 84
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 80 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKE 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 80 CTREPPFYIITEF 92
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 80 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 198 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 257
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 258 RPSFAEIHQAFETMFQESSISDEVEKE 284
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 80 CTREPPFYIITEF 92
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 76 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T + P+ + APE +A + +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + LL K + P E +L++ + + S
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 254 RPSFAEIHQAFETMFQESSISDEVEKE 280
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G FG+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 76 CTREPPFYIITEF 88
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 91 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 209 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 268
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 269 RPSFAEIHQAFETMFQESSISDEVEKE 295
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 91 CTREPPFYIITEF 103
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 131/267 (49%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 83 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 261 RPSFAEIHQAFETMFQESSISDEVEKE 287
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 83 CTREPPFYIITEF 95
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 19/254 (7%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L K + I + YLH+ ++HRDL
Sbjct: 72 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++D + DFG A +S G+H + G+ L+MAPE+I + PY +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP------SQVSETYKDLVKGLL 352
D+++ G + YE+ G P+ ++ I + + P S + K L+ L
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 353 EKDASQRLSWPELL 366
+K +R +P++L
Sbjct: 251 KKKRDERPLFPQIL 264
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+K+++ + + ++L + K E + + H NI+ F+
Sbjct: 16 IGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 72 -YSTKPQLAIVTQW 84
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N+++ +KL++ ++ ++ L Y
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR + T Y APE++
Sbjct: 137 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNW 193
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253
Query: 347 LVKGLLE 353
++ L +
Sbjct: 254 YIQSLAQ 260
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 112
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+GCI E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 118/236 (50%), Gaps = 37/236 (15%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + H + K T
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKTT 210
Query: 281 ----PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 95 NIINLLGACTQDGPLYVIVEYA 116
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 82 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 200 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 259
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 260 RPSFAEI 266
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 82 CTREPPFYIITEF 94
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 214
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 215 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 94
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 95 NIINLLGACTQDGPLYVIVEYA 116
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + D+G AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+GCI E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRK----------------KLSETICVQ 221
NII + + +I E+A +L L+ R+ +LS V
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
+ + YL S + +HRDL +NVL+ +D V + DFG AR + + + T+
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 255
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ V + L +LLK
Sbjct: 256 PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 17 IGEGSFGKVF--KAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLA-HP 68
+GEG+FG+V +AI LD K VA+K++ KS + K+LS L E E+ K + H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEMMKMIGKHK 135
Query: 69 NIIKFIASHETLNEFVLITEFA 90
NII + + +I E+A
Sbjct: 136 NIINLLGACTQDGPLYVIVEYA 157
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 256 RPSFAEI 262
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 78 CTREPPFYIITEF 90
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 83 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 261 RPSFAEI 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 83 CTREPPFYIITEF 95
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+GCI E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 160
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR + T Y APE++
Sbjct: 161 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMXGXVATRWYRAPEIMLNW 217
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 277
Query: 347 LVKGLLE 353
++ L +
Sbjct: 278 YIQSLAQ 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 256 RPSFAEI 262
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 78 CTREPPFYIITEF 90
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 131/289 (45%), Gaps = 42/289 (14%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V + + +A+K +S+ +S +E + KH+ H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 169
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR +T T Y APE++
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNW 226
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVT----FPSQVSET 343
Y+ T D+WS+GCI E+ G F + ++RL T + PS +
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARN 286
Query: 344 Y-----------------------KDLVKGLLEKDASQRLSWPELLHHP 369
Y DL++ +L D +R++ E L HP
Sbjct: 287 YINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHP 335
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V + + +A+K +S+ +S +E + KH+ H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNI 145
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 77
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 78 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 128
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 129 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 186
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF----KTVSILHLIR-LLKTQDVTF 336
YM+PE + Y +D+WS+G E+ +G P +++I L+ ++
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKL 246
Query: 337 PSQV-SETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIE 380
PS V S ++D V L K+ ++R +L+ H +K + + E++
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 291
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ ++P++ HP K
Sbjct: 255 TE----------FAFPQIKAHPWTK 269
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 114/229 (49%), Gaps = 9/229 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L L + VA+K++ R ++E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ A+ E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKGTPLYMAPELI 289
H N ++HRD+KP N++++ + DFG AR++A + +T ++ GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
D +D++SLGC+ YE+ G PPF S + + +D PS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +I EF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIIIEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKE 282
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +I EF
Sbjct: 78 CTREPPFYIIIEF 90
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 163
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DFG AR + T Y APE++
Sbjct: 164 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMXGYVATRWYRAPEIMLNW 220
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 139
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 130/267 (48%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +I EF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 78 CTREPPFYIIIEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 196 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 255
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 256 RPSFAEIHQAFETMFQESSISDEVEKE 282
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 77 HETLNEFVLITEF 89
F +I EF
Sbjct: 78 CTREPPFYIIIEF 90
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 76 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T + P+ + APE +A + +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + LL K + P E +L++ + + S
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 254 RPSFAEIHQAFETMFQESSISDEVEKE 280
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 76 CTREPPFYIITEF 88
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 144/331 (43%), Gaps = 64/331 (19%)
Query: 85 LITEFAHMSLSKLGEPW---FHNHCQPVKMEKSNGALE---------------------- 119
L+ +HMS G P F C+PV+ + G+++
Sbjct: 39 LVPRGSHMS----GRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPD 94
Query: 120 -----KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
Y +IG GSFG V++A D + VA+K + + R +E +I +
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRK 148
Query: 175 LAHPNIIK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILS 224
L H NI++ F +S E +E L + ++ ++ + + +T+ V +
Sbjct: 149 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLY 283
L +L Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YY 267
Query: 284 MAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVS 341
APELI Y + D+WS GC+ E+ +G P F S + L+ ++K Q+
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 327
Query: 342 ETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
E + + +P++ HP K
Sbjct: 328 EMNPNYTE----------FKFPQIKAHPWTK 348
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 154
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 155 VRLRYFFYSSGEKKDEVYL 173
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 285 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
+L +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 403 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 462
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 463 RPSFAEI 469
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 285 CTREPPFYIITEF 297
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 173
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 174 HLAHPNIIKFI---ASHETLNEFVLITEFAHMS--LSNLLEQRKKL---SETICVQILSN 225
HPN+++ + A+ T E + F H+ L L++ +ETI ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-DLMRQ 120
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
+ L +LH+N ++HRDLKP+N+L+ G L DFG AR + L + T Y A
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALAPVVVTLWYRA 179
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
PE++ + Y D+WS+GCI E+ P F
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 63
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 64 HLAHPNIIKFI---ASHETLNEFVLITEFAHM 92
HPN+++ + A+ T E + F H+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 122/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 83 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T + P+ + APE +A + +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 261 RPSFAEI 267
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 83 CTREPPFYIITEF 95
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 228
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 289 TE----------FKFPQIKAHPWTK 303
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 109
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 110 VRLRYFFYSSGEKKDEVYL 128
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 206
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 267 TE----------FKFPQIKAHPWTK 281
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 87
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 88 VRLRYFFYSSGEKKDEVYL 106
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + FG AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR------SGKELSSLKQECEIQ 172
+KY + +G G+FG V+ A+ + K V +K I K +L + E I
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 173 KHLAHPNIIKFIASHETLNEFVLITE--FAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
+ H NIIK + E F L+ E + + L +++ +L E + I L+SA+
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YL ++HRD+K +N+++ +D L DFG A + G + + GT Y APE++
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLM 202
Query: 291 ERPYDHTA-DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF--PSQVSETYKDL 347
PY ++WSLG Y + PF L +T + P VS+ L
Sbjct: 203 GNPYRGPELEMWSLGVTLYTLVFEENPF--------CELEETVEAAIHPPYLVSKELMSL 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLV 371
V GLL+ +R + +L+ P V
Sbjct: 255 VSGLLQPVPERRTTLEKLVTDPWV 278
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR------SGKELSSLKQECEIQ 62
+KY + +G G+FG V+ A+ + K V +K I K +L + E I
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 63 KHLAHPNIIKFIASHETLNEFVLITE 88
+ H NIIK + E F L+ E
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVME 109
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 128/265 (48%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ ++P++ HP K
Sbjct: 255 TE----------FAFPQIKAHPWTK 269
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 94
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 213
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 273
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 274 TE----------FKFPQIKAHPWTK 288
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 94
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 95 VRLRYFFYSSGEKKDEVYL 113
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 135/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+GCI E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 103
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 164 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 222
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 282
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 283 TE----------FKFPQIKAHPWTK 297
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 103
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 104 VRLRYFFYSSGEKKDEVYL 122
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 13/212 (6%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 173
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 174 HLAHPNIIKFI---ASHETLNEFVLITEFAHMS--LSNLLEQRKKL---SETICVQILSN 225
HPN+++ + A+ T E + F H+ L L++ +ETI ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-DLMRQ 120
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMA 285
+ L +LH+N ++HRDLKP+N+L+ G L DFG AR + L + T Y A
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALDPVVVTLWYRA 179
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
PE++ + Y D+WS+GCI E+ P F
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 63
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 64 HLAHPNIIKFI---ASHETLNEFVLITEFAHM 92
HPN+++ + A+ T E + F H+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 173
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 174 HLAHPNIIKFI---ASHETLNEFVLITEFAHMS--LSNLLEQRKK--LSETICVQILSNL 226
HPN+++ + A+ T E + F H+ L L++ L ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 227 ISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAP 286
+ L +LH+N ++HRDLKP+N+L+ G L DFG AR + + + T Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAP 180
Query: 287 ELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
E++ + Y D+WS+GCI E+ P F
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQK-- 63
A +Y+ + IG G++G V+KA VALK + +G G +S++++ +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 64 HLAHPNIIKFI---ASHETLNEFVLITEFAHM 92
HPN+++ + A+ T E + F H+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 83
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 202
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 262
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 263 TE----------FKFPQIKAHPWTK 277
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 83
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 84 VRLRYFFYSSGEKKDEVYL 102
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 148 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 206
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 266
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 267 TE----------FKFPQIKAHPWTK 281
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 87
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 88 VRLRYFFYSSGEKKDEVYL 106
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 111
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 172 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 230
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 290
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 291 TE----------FKFPQIKAHPWTK 305
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 111
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 112 VRLRYFFYSSGEKKDEVYL 130
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 113
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 174 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 232
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 292
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 293 TE----------FKFPQIKAHPWTK 307
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 113
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 114 VRLRYFFYSSGEKKDEVYL 132
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + DF AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
Y+ T D+WS+GCI E+ G F + ++L+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 170 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 228
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 289 TE----------FKFPQIKAHPWTK 303
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 109
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 110 VRLRYFFYSSGEKKDEVYL 128
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 79
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 140 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 198
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 258
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 259 TE----------FKFPQIKAHPWTK 273
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 79
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 80 VRLRYFFYSSGEKKDEVYL 98
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 80
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 141 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 199
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 259
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 260 TE----------FKFPQIKAHPWTK 274
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 80
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 81 VRLRYFFYSSGEKKDEVYL 99
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + D G AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 282 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
+L +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 400 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 459
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 460 RPSFAEI 466
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 282 CTREPPFYIITEF 294
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 255 TE----------FKFPQIKAHPWTK 269
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 18/247 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH--PNIIKFI 184
+G G F V + I + A K + K R + + E + + LA P +I
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLE-LAKSCPRVINLH 95
Query: 185 ASHETLNEFVLITEFAH----MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+E +E +LI E+A SL L E + +SE ++++ ++ +YYLH N ++H
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLC-LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 241 RDLKPQNVLLNKD---GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
DLKPQN+LL+ G + DFG +R + L I GTP Y+APE++ P
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILNYDPITTA 213
Query: 298 ADLWSLGCIAYEIHMGHPPF----KTVSILHLIRL-LKTQDVTFPSQVSETYKDLVKGLL 352
D+W++G IAY + PF + L++ ++ + + TF S VS+ D ++ LL
Sbjct: 214 TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF-SSVSQLATDFIQSLL 272
Query: 353 EKDASQR 359
K+ +R
Sbjct: 273 VKNPEKR 279
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +ITEF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 324 CTREPPFYIITEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
+L +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 442 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 501
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQNNQDCIGF 390
R S+ E+ + ++S E+E + ++ + F
Sbjct: 502 RPSFAEIHQAFETMFQESSISDEVEKELGKENLYF 536
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 77 HETLNEFVLITEF 89
F +ITEF
Sbjct: 324 CTREPPFYIITEF 336
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 76
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 195
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 255
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 256 TE----------FKFPQIKAHPWTK 270
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 76
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 77 VRLRYFFYSSGEKKDEVYL 95
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 88
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 207
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 267
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 268 TE----------FKFPQIKAHPWTK 282
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 88
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 89 VRLRYFFYSSGEKKDEVYL 107
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 255 TE----------FKFPQIKAHPWTK 269
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 122/247 (49%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +I EF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 83 CTREPPFYIIIEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 201 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 260
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 261 RPSFAEI 267
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 77 HETLNEFVLITEF 89
F +I EF
Sbjct: 83 CTREPPFYIIIEF 95
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + D G AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 255 TE----------FKFPQIKAHPWTK 269
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + GK + +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKN--RELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 16/247 (6%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 179 NIIKFI------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
N+I + S E N+ L+T L+N++ + +KL++ ++ ++ L Y
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDDHVQFLIYQILRGLKY 140
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
+HS ++HRDLKP N+ +N+D + D G AR +T T Y APE++
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATRWYRAPEIMLNW 197
Query: 292 RPYDHTADLWSLGCIAYEIHMGH---PPFKTVSILHLI-RLLKTQDVTFPSQV-SETYKD 346
Y+ T D+WS+GCI E+ G P + L LI RL+ T ++ SE+ ++
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 257
Query: 347 LVKGLLE 353
++ L +
Sbjct: 258 YIQSLTQ 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
E+YQ + +G G++G V A VA+K +S+ +S +E + KH+ H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 69 NIIKFI------ASHETLNEFVLITEFAHMSLSKL 97
N+I + S E N+ L+T L+ +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+G I E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 209 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 214 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 265
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 211 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 262
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLXGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 67 HPNIIKFI---ASHETLNEF 83
H NII + +TL EF
Sbjct: 82 HKNIISLLNVFTPQKTLEEF 101
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 125/265 (47%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E +E L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 255 TE----------FKFPQIKAHPWTK 269
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 71 IK----FIASHETLNEFVL 85
++ F +S E +E L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL 94
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L L + VA+K++ R ++E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ + E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKGTPLYMAPELI 289
H N ++HRD+KP N++++ + DFG AR++A + +T ++ GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
D +D++SLGC+ YE+ G PPF S + + +D PS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 181 IKFIA-----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHS 235
I S E NE +I E L ++ + LS+ + + A+ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFAR---------SMAVGTHM-LTSIKGTPLYMA 285
+ V+HRDLKP N+L+N + +CDFG AR S G +T T Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRA 190
Query: 286 PE-LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
PE ++ Y D+WS GCI E+ + P F H + L+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 71 IKFIA-----SHETLNEFVLITEFAHMSLSKL 97
I S E NE +I E L ++
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRV 103
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 117/232 (50%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + ++LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGT 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + T+
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 113/229 (49%), Gaps = 9/229 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L L + VA+K++ R ++E + L H
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ + E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKGTPLYMAPELI 289
H N ++HRD+KP N++++ + DFG AR++A + +T ++ GT Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
D +D++SLGC+ YE+ G PPF S + + +D PS
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 181 IKFIA-----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHS 235
I S E NE +I E L ++ + LS+ + + A+ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFAR---------SMAVGTHM-LTSIKGTPLYMA 285
+ V+HRDLKP N+L+N + +CDFG AR S G +T T Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 286 PE-LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
PE ++ Y D+WS GCI E+ + P F H + L+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 71 IKFIA-----SHETLNEFVLITEFAHMSLSKL 97
I S E NE +I E L ++
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRV 103
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 67 HPNIIKFI---ASHETLNEF 83
H NII + +TL EF
Sbjct: 82 HKNIISLLNVFTPQKTLEEF 101
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I E+A +L L R+ I +L+S
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 319
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G FG+V+ D K A+K + K K+ +L I L FI
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 186 ----SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+ T ++ I + + L L Q SE + +I L ++H+ V++
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 241 RDLKPQNVLLNKDG------VAMLCDFGFARSMA-VGTHMLTSIKGTPLYMAPELIAER- 292
RDLKP N+LL++ G + + CDF + A VGTH YMAPE++ +
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG---------YMAPEVLQKGV 366
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
YD +AD +SLGC+ +++ GH PF KT + R+ T V P S + L++
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 350 GLLEKDASQRLS 361
GLL++D ++RL
Sbjct: 427 GLLQRDVNRRLG 438
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G FG+V+ D K A+K + K K+ +L I L FI
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 186 ----SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+ T ++ I + + L L Q SE + +I L ++H+ V++
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 241 RDLKPQNVLLNKDG------VAMLCDFGFARSMA-VGTHMLTSIKGTPLYMAPELIAER- 292
RDLKP N+LL++ G + + CDF + A VGTH YMAPE++ +
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG---------YMAPEVLQKGV 366
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
YD +AD +SLGC+ +++ GH PF KT + R+ T V P S + L++
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 350 GLLEKDASQRLS 361
GLL++D ++RL
Sbjct: 427 GLLQRDVNRRLG 438
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G FG+V+ D K A+K + K K+ +L I L FI
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 186 ----SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+ T ++ I + + L L Q SE + +I L ++H+ V++
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 241 RDLKPQNVLLNKDG------VAMLCDFGFARSMA-VGTHMLTSIKGTPLYMAPELIAER- 292
RDLKP N+LL++ G + + CDF + A VGTH YMAPE++ +
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG---------YMAPEVLQKGV 366
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
YD +AD +SLGC+ +++ GH PF KT + R+ T V P S + L++
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 350 GLLEKDASQRLS 361
GLL++D ++RL
Sbjct: 427 GLLQRDVNRRLG 438
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G FG+V+ D K A+K + K K+ +L I L FI
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 186 ----SHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
+ T ++ I + + L L Q SE + +I L ++H+ V++
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 241 RDLKPQNVLLNKDG------VAMLCDFGFARSMA-VGTHMLTSIKGTPLYMAPELIAER- 292
RDLKP N+LL++ G + + CDF + A VGTH YMAPE++ +
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG---------YMAPEVLQKGV 365
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPF---KTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
YD +AD +SLGC+ +++ GH PF KT + R+ T V P S + L++
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 425
Query: 350 GLLEKDASQRLS 361
GLL++D ++RL
Sbjct: 426 GLLQRDVNRRLG 437
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 130
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 191 YRAPEVILGMGYKENVD 207
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+GCI E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 133
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
Q +C I G + K ++ +K LKI+ S + + ++
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 178 PNIIKFIASHETLN 191
P +I + E ++
Sbjct: 194 PEVILGMGYKENVD 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 49/307 (15%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG VF+A ++ + K++ +EL +I + + HPN+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL-------QIMRIVKHPNV 94
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICVQILS----NLISAL 230
+ F ++ + +E L + E+ ++ KL +T+ + ++ L+ +L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ GV L DFG A+ + G ++ I Y APELI
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR-YYRAPELI 213
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLL--------KTQDVTF 336
Y D+WS GC+ E+ G P F S ++ +I++L KT + +
Sbjct: 214 FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273
Query: 337 ---------PSQVSETYK--------DLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI 379
P S+ ++ DL+ LLE S RL+ E L HP + + E
Sbjct: 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEA 333
Query: 380 ESQNNQD 386
N ++
Sbjct: 334 RMPNGRE 340
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG VF+A ++ + K++ +EL +I + + HPN+
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL-------QIMRIVKHPNV 94
Query: 71 IKFIA 75
+ A
Sbjct: 95 VDLKA 99
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 132/313 (42%), Gaps = 64/313 (20%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHL 175
+KY IG+GS+G V AI + A+KI++K+ + K++ +K E + K L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHM--------------------------------- 202
HPNI + +E L+ E H
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 203 -------SLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL 250
S+ E QR+KL I QI S AL+YLH+ + HRD+KP+N L
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFS----ALHYLHNQGICHRDIKPENFLF 201
Query: 251 --NKDGVAMLCDFGFARS---MAVGTHM-LTSIKGTPLYMAPELI--AERPYDHTADLWS 302
NK L DFG ++ + G + +T+ GTP ++APE++ Y D WS
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 303 LGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQ----VSETYKDLVKGLLEKDASQ 358
G + + + MG PF V+ I + + + F + +S +DL+ LL ++ +
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 359 RLSWPELLHHPLV 371
R L HP +
Sbjct: 322 RFDAMRALQHPWI 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG---RSGKELSSLKQECEIQKHL 65
+KY IG+GS+G V AI + A+KI++K+ + K++ +K E + K L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 66 AHPNIIKFIASHETLNEFVLITEFAH 91
HPNI + +E L+ E H
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCH 111
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +I EF M+ NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 79 CTREPPFYIIIEF--MTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T + P+ + APE +A + +D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + + LL K + P E +L++ + + S
Sbjct: 197 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 256
Query: 359 RLSWPEL---LHHPLVKDNLSSEIESQ 382
R S+ E+ + ++S E+E +
Sbjct: 257 RPSFAEIHQAFETMFQESSISDEVEKE 283
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 77 HETLNEFVLITEF 89
F +I EF
Sbjct: 79 CTREPPFYIIIEF 91
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 134/303 (44%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +LS +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--ELDHERMSYLLYQMLVGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFK----------------TVSILHLIRLLKT--- 331
Y D+WS+G I E+ G F T S + +L T
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKL 97
H NII + ++L EF ++ E +LS++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV 118
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 120/247 (48%), Gaps = 13/247 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F +I EF M+ NLL+ R+++S + + + + + SA+ YL +HR
Sbjct: 76 CTREPPFYIIIEF--MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ + + DFG +R M T + P+ + APE +A + +D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W+ G + +EI G P+ + + LL K + P E +L++ + + S
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 359 RLSWPEL 365
R S+ E+
Sbjct: 254 RPSFAEI 260
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V++ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 77 HETLNEFVLITEF 89
F +I EF
Sbjct: 76 CTREPPFYIIIEF 88
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 79 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 137
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 138 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 197
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 198 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 257
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 258 RPRFTEL------KAQLSTILEEEKAQ 278
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 79 IG---------VITENPVWIIMELCTLGE 98
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 199
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH----LIRLLKT--------------- 331
Y D+WS+GCI E+ G F + +I L T
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 259
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 260 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319
Query: 369 PLV 371
P +
Sbjct: 320 PYI 322
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 134
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
Q +C I G + K ++ +K LKI+ S + + ++
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Query: 178 PNIIKFIASHETLN 191
P +I + E ++
Sbjct: 195 PEVILGMGYKENVD 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I +A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 82 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 141 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 200
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 201 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 260
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 261 RPRFTEL------KAQLSTILEEEKAQ 281
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 82 IG---------VITENPVWIIMELCTLGE 101
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLXGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF 83
H NII + +TL EF
Sbjct: 82 HKNIISLLNVFTPQKTLEEF 101
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 80 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 138
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 139 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 198
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 199 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 258
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 259 RPRFTEL------KAQLSTILEEEKAQ 279
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 80 IG---------VITENPVWIIMELCTLGE 99
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 74 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 132
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 133 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 192
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 193 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 252
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 253 RPRFTEL------KAQLSTILEEEKAQ 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 74 IG---------VITENPVWIIMELCTLGE 93
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 144
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 145 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 203
Query: 291 ERPYDHTADLWSLGCIAYEI---------------------HMGHP-PFKTVSILHLIRL 328
Y DLWS+GCI E+ +G P P + +R
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 263
Query: 329 LKTQ--------------DVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 264 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 369 PLV 371
P +
Sbjct: 324 PYI 326
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 86
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 138
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
Q +C I G + K ++ +K LKI+ S + + ++
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 198
Query: 178 PNIIKFIASHETLN 191
P +I + E ++
Sbjct: 199 PEVILGMGYKENVD 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLXGI 132
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 191
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 192 GMGYKENVDIWSVGCIMGEM 211
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 67 HPNIIKFI---ASHETLNEF 83
H NII + +TL EF
Sbjct: 75 HKNIISLLNVFTPQKTLEEF 94
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 37/274 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++ EG F V++A + + ALK + S K + +++ C ++K HPNI++F +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 186 --------SHETLNEFVLITEFAHMSLSNLL---EQRKKLSETICVQILSNLISALYYLH 234
S EF+L+TE L L E R LS ++I A+ ++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 235 SNR--VLHRDLKPQNVLLNKDGVAMLCDFGFARSM-------------AVGTHMLTSIKG 279
+ ++HRDLK +N+LL+ G LCDFG A ++ A+ +T
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR-NT 212
Query: 280 TPLYMAPELI---AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF 336
TP+Y PE+I + P D+W+LGCI Y + PF+ + L ++ +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSI 268
Query: 337 PSQVSE--TYKDLVKGLLEKDASQRLSWPELLHH 368
P ++ + L++ +L+ + +RLS E++H
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++ EG F V++A + + ALK + S K + +++ C ++K HPNI++F +
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 76 --------SHETLNEFVLITEFAHMSL 94
S EF+L+TE L
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQL 120
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 51/293 (17%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 58
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 59 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 167
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMG-------------HPPFKTVSILHLIRL 328
YM+PE + Y +D+WS+G E+ +G PP +L I
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYI-- 225
Query: 329 LKTQDVTFPSQV-SETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIE 380
+ PS V S ++D V L K+ ++R +L+ H +K + + E++
Sbjct: 226 VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 278
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 105 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 163
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 164 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 223
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 224 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 283
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 284 RPRFTEL------KAQLSTILEEEKAQ 304
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 105 IG---------VITENPVWIIMELCTLGE 124
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH----LIRLLKT--------------- 331
Y D+WS+GCI E+ G F + +I L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 133
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
Q +C I G + K ++ +K LKI+ S + + ++
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Query: 178 PNIIKFIASHETLN 191
P +I + E ++
Sbjct: 194 PEVILGMGYKENVD 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKVF--KAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HP 178
+GEG+FG+V +A+ +D K TVA+K++ K + K+LS L E E+ K + H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQI---------LSNLIS 228
NII + + +I +A +L L R+ I +L+S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 229 ALY-------YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
Y YL S + +HRDL +NVL+ ++ V + DFG AR + + + G
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
P+ +MAPE + +R Y H +D+WS G + +EI +G P+ + + L +LLK
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 192
Query: 291 ERPYDHTADLWSLGCIAYEI---------------------HMGHP-PFKTVSILHLIRL 328
Y DLWS+GCI E+ +G P P + +R
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 252
Query: 329 LKTQ--------------DVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 253 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 312
Query: 369 PLV 371
P +
Sbjct: 313 PYI 315
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 127
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
Q +C I G + K ++ +K LKI+ S + + ++
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 187
Query: 178 PNIIKFIASHETLN 191
P +I + E ++
Sbjct: 188 PEVILGMGYKENVD 201
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 181 IKFIA-----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHS 235
I S E NE +I E L ++ + LS+ + + A+ LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFAR---------SMAVGTHM-LTSIKGTPLYMA 285
+ V+HRDLKP N+L+N + +CDFG AR S G + T Y A
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 286 PE-LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
PE ++ Y D+WS GCI E+ + P F H + L+
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+Q L+GEG++G V A H + VA+K I + L +L+ E +I KH H NI
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKHENI 71
Query: 71 IKFIA-----SHETLNEFVLITEFAHMSLSKL 97
I S E NE +I E L ++
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRV 103
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 255
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 256 RPRFTEL------KAQLSTILEEEKLQ 276
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 77 IG---------VITENPVWIIMELCTLGE 96
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 113/247 (45%), Gaps = 10/247 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 576 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 635
Query: 359 RLSWPEL 365
R + EL
Sbjct: 636 RPRFTEL 642
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 457 IG---------VITENPVWIIMELCTLGE 476
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 255
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 256 RPRFTEL------KAQLSTILEEEKLQ 276
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 77 IG---------VITENPVWIIMELCTLGE 96
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKT---VALKIISKSGRSGKELSSLKQECEIQK 173
L+ + + +IG GS+ KV + + LKKT A+K++ K + E Q +K
Sbjct: 18 GLQDFDLLRVIGRGSYAKV---LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEK 71
Query: 174 HL-----AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLI 227
H+ HP ++ + +T + + E+ + L +++++KL E + +
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE 287
AL YLH +++RDLK NVLL+ +G L D+G + + GTP Y+APE
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------HLIRLLKTQDVTFPS 338
++ Y + D W+LG + +E+ G PF V +L +++ + + P
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 251
Query: 339 QVSETYKDLVKGLLEKDASQRL------SWPELLHHPLVKD 373
+S ++K L KD +RL + ++ HP ++
Sbjct: 252 SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 177
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 236
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 237 GMGYKENVDIWSVGCIMGEM 256
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 168
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 229 YRAPEVILGMGYKENVD 245
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 22/266 (8%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL---- 175
+Y+ L+G+G FG VF L + VA+K+I ++ G S C ++ L
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 176 ----AHPNIIKFIASHETLNEFVLITE--FAHMSLSNLLEQRKKLSETICVQILSNLISA 229
HP +I+ + ET F+L+ E L + + ++ L E +++A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 230 LYYLHSNRVLHRDLKPQNVLLN-KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL 288
+ + HS V+HRD+K +N+L++ + G A L DFG + T GT +Y PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFDGTRVYSPPEW 209
Query: 289 IAERPYDH-TADLWSLGCIAYEIHMGHPPF-KTVSILHLIRLLKTQDVTFPSQVSETYKD 346
I+ Y A +WSLG + Y++ G PF + IL ++ FP+ VS
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE-------AELHFPAHVSPDCCA 262
Query: 347 LVKGLLEKDASQRLSWPELLHHPLVK 372
L++ L S R S E+L P ++
Sbjct: 263 LIRRCLAPKPSSRPSLEEILLDPWMQ 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL---- 65
+Y+ L+G+G FG VF L + VA+K+I ++ G S C ++ L
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 66 ----AHPNIIKFIASHETLNEFVLITE 88
HP +I+ + ET F+L+ E
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE 118
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 130
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 191 YRAPEVILGMGYKENVD 207
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 199
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 200 GMGYKENVDIWSVGCIMGEM 219
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 131
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 192 YRAPEVILGMGYKENVD 208
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 140
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 141 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 199
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 200 GMGYKENVDIWSVGCIMGEM 219
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 82
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 131
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 192 YRAPEVILGMGYKENVD 208
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 177
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 236
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 237 GMGYKENVDIWSVGCIMGEM 256
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 119
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 168
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 229 YRAPEVILGMGYKENVD 245
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 132
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 191
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 192 GMGYKENVDIWSVGCIMGEM 211
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 74
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 123
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 184 YRAPEVILGMGYKENVD 200
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 199 GMGYKENVDIWSVGCIMGEM 218
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 130
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 191 YRAPEVILGMGYKENVD 207
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 192
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 193 GMGYKENVDIWSVGCIMGEM 212
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 124
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 185 YRAPEVILGMGYKENVD 201
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 133
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 192
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 193 GMGYKENVDIWSVGCIMGEM 212
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 75
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 124
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 185 YRAPEVILGMGYKENVD 201
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 30/281 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKT---VALKIISKSGRSGKELSSLKQECEIQK 173
L+ + + +IG GS+ KV + + LKKT A++++ K + E Q +K
Sbjct: 50 GLQDFDLLRVIGRGSYAKV---LLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQ---TEK 103
Query: 174 HL-----AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLI 227
H+ HP ++ + +T + + E+ + L +++++KL E + +
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE 287
AL YLH +++RDLK NVLL+ +G L D+G + ++ GTP Y+APE
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------HLIRLLKTQDVTFPS 338
++ Y + D W+LG + +E+ G PF V +L +++ + + P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283
Query: 339 QVSETYKDLVKGLLEKDASQRL------SWPELLHHPLVKD 373
+S ++K L KD +RL + ++ HP ++
Sbjct: 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L +++ +L +L ++ +
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 138
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 139 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPYVVTRYYRAPEVIL 197
Query: 291 ERPYDHTADLWSLGCIAYEI 310
Y D+WS+GCI E+
Sbjct: 198 GMGYKENVDIWSVGCIMGEM 217
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L + VA+K +S+ ++ +E + K +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 80
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ ++ME + +
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIQMELDHERMSY 129
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH 174
YQ +C I G + K ++ +K LKI+ S + + ++
Sbjct: 130 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 189
Query: 175 LAHPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 190 YRAPEVILGMGYKENVD 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ + L DFG +R M T S P+ +MAPE I R + +D+
Sbjct: 136 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 255
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 256 RPRFTEL------KAQLSTILEEEKLQ 276
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 77 IG---------VITENPVWIIMELCTLGE 96
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 124/265 (46%), Gaps = 30/265 (11%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 181 IK----FIASHETLNEFVL--ITEFAHMSLSNLLEQRKKLSETICV----QILSNLISAL 230
++ F +S E + L + ++ ++ + + +T+ V + L +L
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 231 YYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI 289
Y+HS + HRD+KPQN+LL+ D V LCDFG A+ + G ++ I Y APELI
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPELI 194
Query: 290 -AERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVTFPSQVSETYKDL 347
Y + D+WS GC+ E+ +G P F S + L+ ++K Q+ E +
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 348 VKGLLEKDASQRLSWPELLHHPLVK 372
+ +P++ HP K
Sbjct: 255 TE----------FKFPQIKAHPWTK 269
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
Y +IG GSFG V++A D + VA+K + + R +E +I + L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK------NRELQIMRKLDHCNI 75
Query: 71 IK 72
++
Sbjct: 76 VR 77
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 135
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 136 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 195
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 196 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 255
Query: 359 RLSWPELLHHPLVKDNLSSEIESQNNQ 385
R + EL K LS+ +E + Q
Sbjct: 256 RPRFTEL------KAQLSTILEEEKLQ 276
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 77 IG---------VITENPVWIIMELCTLGE 96
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 19/262 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH-PNIIKFIA 185
IG G++G V K +H + +A+K I +S KE L + ++ + P I++F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNL----ISALYYLHSN-RVL 239
+ + + E S + L + I +IL + + AL +L N +++
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI----AERPYD 295
HRD+KP N+LL++ G LCDFG + + V + T G YMAPE I + + YD
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSASRQGYD 207
Query: 296 HTADLWSLGCIAYEIHMGHPPF-KTVSIL-HLIRLLKTQDVTFPS----QVSETYKDLVK 349
+D+WSLG YE+ G P+ K S+ L +++K + + S ++ + V
Sbjct: 208 VRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVN 267
Query: 350 GLLEKDASQRLSWPELLHHPLV 371
L KD S+R + ELL HP +
Sbjct: 268 LCLTKDESKRPKYKELLKHPFI 289
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 16/267 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
EKY +G G FG V + + KKT K + G + +K+E I H
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHR 61
Query: 179 NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK----KLSETICVQILSNLISALYYLH 234
NI+ S E++ E V+I EF +S ++ E+ +L+E V + + AL +LH
Sbjct: 62 NILHLHESFESMEELVMIFEF--ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 235 SNRVLHRDLKPQNVLLN--KDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAER 292
S+ + H D++P+N++ + + +FG AR + G + + P Y APE+
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-FRLLFTAPEYYAPEVHQHD 178
Query: 293 PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKDLV 348
D+WSLG + Y + G PF + +I + + TF ++S D V
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 349 KGLLEKDASQRLSWPELLHHPLVKDNL 375
LL K+ R++ E L HP +K +
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQKI 265
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
EKY +G G FG V + + KKT K + G + +K+E I H
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIARHR 61
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ S E++ E V+I EF
Sbjct: 62 NILHLHESFESMEELVMIFEF 82
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + L+T L LL+ + ++ IC L ++ L Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 161
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y ++ IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHEN 102
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+I ++ E + + ++ + L LL+ ++ ++ IC L ++ L Y+H
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-FLYQILRGLKYIH 161
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH----MLTSIKGTPLYMAPE-LI 289
S VLHRDLKP N+L+N +CDFG AR +A H LT T Y APE ++
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 141
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+ T Y APE+I
Sbjct: 142 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMVPFVVTRYYRAPEVIL 200
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL----HLIRLLKT--------------- 331
Y D+WS+GCI E+ G F + +I L T
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 260
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 261 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 320
Query: 369 PLV 371
P +
Sbjct: 321 PYI 323
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 83
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 135
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKII 152
Q +C I G + K ++ +K LKI+
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 170
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 112/229 (48%), Gaps = 9/229 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L + VA+K++ R ++E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ + E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKGTPLYMAPELI 289
H N ++HRD+KP N++++ + DFG AR++A + +T ++ GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
D +D++SLGC+ YE+ G PPF S + + +D PS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L + VA+K++ R ++E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ + E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKGTPLYMAPELI 289
H N ++HRD+KP N++++ + DFG AR++A + +T ++ GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPF 317
D +D++SLGC+ YE+ G PPF
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKT---VALKIISKSGRSGKELSSLKQECEIQK 173
L+ + + +IG GS+ KV + + LKKT A+K++ K + E Q +K
Sbjct: 3 GLQDFDLLRVIGRGSYAKV---LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEK 56
Query: 174 HL-----AHPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLI 227
H+ HP ++ + +T + + E+ + L +++++KL E + +
Sbjct: 57 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 116
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPE 287
AL YLH +++RDLK NVLL+ +G L D+G + + GTP Y+APE
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------HLIRLLKTQDVTFPS 338
++ Y + D W+LG + +E+ G PF V +L +++ + + P
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 236
Query: 339 QVSETYKDLVKGLLEKDASQRL------SWPELLHHPLVKD 373
+S ++K L KD +RL + ++ HP ++
Sbjct: 237 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 112/247 (45%), Gaps = 10/247 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKT-CKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS--NLISALYYLHSNRVLHR 241
I T N +I E + Q +K S + IL L +AL YL S R +HR
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR 515
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +NVL++ L DFG +R M T+ S P+ +MAPE I R + +D+
Sbjct: 516 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
W G +EI M G PF+ V +I R+ + + P T L+ D S+
Sbjct: 576 WMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSR 635
Query: 359 RLSWPEL 365
R + EL
Sbjct: 636 RPRFTEL 642
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
IGEG FG V + I++ + VA+K K+ S QE + HP+I+K
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIK-TCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 74 IASHETLNEFVLITE---FAHMSLSKLGE 99
I +ITE + M L LGE
Sbjct: 457 IG---------VITENPVWIIMELCTLGE 476
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPEVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL----HLIRLLKT--------------- 331
Y D+WS+GCI E+ G F + +I L T
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 332 -----------------QDVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 133
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKII 152
Q +C I G + K ++ +K LKI+
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKT---VALKIISKS-GRSGKELSSLKQECEIQ 172
L+ + + +IG GS+ KV + + LKKT A+K++ K +++ ++ E +
Sbjct: 7 GLQDFDLLRVIGRGSYAKV---LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 63
Query: 173 KHLA-HPNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISAL 230
+ + HP ++ + +T + + E+ + L +++++KL E + + AL
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
YLH +++RDLK NVLL+ +G L D+G + + GTP Y+APE++
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------HLIRLLKTQDVTFPSQVS 341
Y + D W+LG + +E+ G PF V +L +++ + + P +S
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 243
Query: 342 ETYKDLVKGLLEKDASQRL------SWPELLHHPLVKD 373
++K L KD +RL + ++ HP ++
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 127 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
IG GSFG V+K H D VA+KI+ + ++ + + E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 186 SHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ T + ++T++ S +L Q K + I + YLH+ ++HRD+
Sbjct: 100 -YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 244 KPQNVLLNKDGVAMLCDFGFA--RSMAVGTHMLTSIKGTPLYMAPELIA---ERPYDHTA 298
K N+ L++ + DFG A +S G+ + G+ L+MAPE+I P+ +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 299 DLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKD-------LVKGL 351
D++S G + YE+ G P+ ++ I + + P +S+ YK+ LV
Sbjct: 219 DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPKAMKRLVADC 277
Query: 352 LEKDASQRLSWP------ELLHHPLVKDN 374
++K +R +P ELL H L K N
Sbjct: 278 VKKVKEERPLFPQILSSIELLQHSLPKIN 306
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 17 IGEGSFGKVFKA-IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG GSFG V+K H D VA+KI+ + ++ + + E + + H NI+ F+
Sbjct: 44 IGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 76 SHETLNEFVLITEF 89
+ T + ++T++
Sbjct: 100 -YMTKDNLAIVTQW 112
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 141
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 111/229 (48%), Gaps = 9/229 (3%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAH 177
++Y+ ++G G +V A L + VA+K++ R ++E + L H
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 178 PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
P I+ + E ++++ ++L +++ ++ ++++++ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELI 289
H N ++HRD+KP N+L++ + DFG AR++A + + ++ GT Y++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS 338
D +D++SLGC+ YE+ G PPF S + + +D PS
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 27/248 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L KY+ + +G+G++G V+K+I + VA+K I + ++ + +E I L+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 177 -HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQ-ILSNLISALYYLH 234
H NI+ + N+ + F +M R + E + Q ++ LI + YLH
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS------------MAVGTH---------M 273
S +LHRD+KP N+LLN + + DFG +RS +++ + +
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 274 LTSIKGTPLYMAPE-LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH-LIRLLKT 331
LT T Y APE L+ Y D+WSLGCI EI G P F S ++ L R++
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 332 QDVTFPSQ 339
D FPS
Sbjct: 247 ID--FPSN 252
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L KY+ + +G+G++G V+K+I + VA+K I + ++ + +E I L+
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 67 -HPNIIKFIASHETLNEFVLITEFAHM 92
H NI+ + N+ + F +M
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM 93
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 143
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 141
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 90
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 149
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 210 SKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 141
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 84
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 143
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 141
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 12/265 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G+ G+V+K +A+K + +SG + L + K P I++ +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 187 HETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYL-HSNRVLHRDLK 244
T + + E L ++ + + E I ++ ++ ALYYL + V+HRD+K
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVK 152
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI----AERP-YDHTAD 299
P N+LL++ G LCDFG + + V G YMAPE I +P YD AD
Sbjct: 153 PSNILLDERGQIKLCDFGISGRL-VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRAD 211
Query: 300 LWSLGCIAYEIHMGHPPFKT--VSILHLIRLLKTQDVTFPSQV--SETYKDLVKGLLEKD 355
+WSLG E+ G P+K L ++L+ + P + S ++ VK L KD
Sbjct: 212 VWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKD 271
Query: 356 ASQRLSWPELLHHPLVKDNLSSEIE 380
+R + +LL H +K + E++
Sbjct: 272 HRKRPKYNKLLEHSFIKRYETLEVD 296
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK----ELSSLKQECEIQ 172
A +Y+ + IG G++G V+KA VALK + G +S++++ ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 173 K--HLAHPNIIKFI---ASHETLNEFVLITEFAHMS--LSNLLEQRKKL---SETICVQI 222
+ HPN+++ + A+ T E + F H+ L L++ +ETI +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-DL 125
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL 282
+ + L +LH+N ++HRDLKP+N+L+ G L DFG AR + LT + T
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALTPVVVTLW 184
Query: 283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y APE++ + Y D+WS+GCI E+ P F
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK----ELSSLKQECEIQ 62
A +Y+ + IG G++G V+KA VALK + G +S++++ ++
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 63 K--HLAHPNIIKFI---ASHETLNEFVLITEFAHM 92
+ HPN+++ + A+ T E + F H+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 139
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ++ IG G+ G V A L VA+K +S+ ++ +E + K +
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L ++ +L +L ++ +
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGI 137
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A M+T T Y APE+I
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ASTNFMMTPYVVTRYYRAPEVIL 196
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH----LIRLLKTQDVTFPSQVSETYKD 346
Y D+WS+GCI E+ G F+ + +I L T F + + T ++
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRN 256
Query: 347 LVKG 350
V+
Sbjct: 257 YVEN 260
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ++ IG G+ G V A L VA+K +S+ ++ +E + K +
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ + ME + +
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIHMELDHERMSY 128
Query: 121 --YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS 155
YQ +C I + IH DLK + I+ KS
Sbjct: 129 LLYQMLCGIKHLHSAGI---IHRDLKPS---NIVVKS 159
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 80
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 139
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 200 SKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 146
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 88
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 147
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 208 SKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 79
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 138
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 199 SKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+ T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI---------------------HMGHP-PFKTVSILHLIRL 328
Y DLWS+GCI E+ +G P P + +R
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRT 258
Query: 329 LKTQ--------------DVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 133
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLA 176
Q +C I G + K ++ +K LKI+ G + +S E E + ++
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD-FGLARTAGTSFMMEPEVVTRYYR 192
Query: 177 HPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 193 APEVILGMGYKENVD 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 102
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 161
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 178
+Y+ + +IG+GSFG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 179 -----NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALY 231
N+I + + N + E M+L L+++ K S + + +++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
LH NR++H DLKP+N+LL + G + + F S + T I+ + Y APE+I
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 292 RPYDHTADLWSLGCIAYEIHMGHP 315
Y D+WSLGCI E+ G+P
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 68
+Y+ + +IG+GSFG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 69 -----NIIKFIASHETLNEFVLITEFAHMSLSKL 97
N+I + + N + E M+L +L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYEL 188
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHEN 84
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 143
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 204 SKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 12/262 (4%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDL--KKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
+ KY L+GEGS+GKV + + + ++ V + K R +++K+E ++ + L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 176 AHPNIIKFIA--SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQ--ILSNLISALY 231
H N+I+ + +E + ++ E+ + +L+ + +C LI L
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLE 123
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM---AVGTHMLTSIKGTPLYMAPEL 288
YLHS ++H+D+KP N+LL G + G A ++ A TS +G+P + PE+
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEI 182
Query: 289 IA--ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKD 346
+ D+WS G Y I G PF+ +I L + P D
Sbjct: 183 ANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSD 242
Query: 347 LVKGLLEKDASQRLSWPELLHH 368
L+KG+LE + ++R S ++ H
Sbjct: 243 LLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 178
+Y+ + +IG+GSFG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 179 -----NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALY 231
N+I + + N + E M+L L+++ K S + + +++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
LH NR++H DLKP+N+LL + G + + F S + T I+ + Y APE+I
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 292 RPYDHTADLWSLGCIAYEIHMGHP 315
Y D+WSLGCI E+ G+P
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 68
+Y+ + +IG+GSFG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 69 -----NIIKFIASHETLNEFVLITEFAHMSLSKL 97
N+I + + N + E M+L +L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYEL 188
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 129/262 (49%), Gaps = 15/262 (5%)
Query: 122 QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNI 180
+ I +G G++G V K H+ + +A+K I + S +E L + +I + + P
Sbjct: 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFT 112
Query: 181 IKFIASHETLNEFVLITEFAHMSLS----NLLEQRKKLSETICVQILSNLISALYYLHSN 236
+ F + + + E SL ++++ + + E I +I +++ AL +LHS
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 237 -RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI----AE 291
V+HRD+KP NVL+N G +CDFG + + V + T G YMAPE I +
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKT--VSILHLIRLLKTQDVTFPS-QVSETYKDLV 348
+ Y +D+WSLG E+ + P+ + L ++++ P+ + S + D
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 291
Query: 349 KGLLEKDASQRLSWPELLHHPL 370
L+K++ +R ++PEL+ HP
Sbjct: 292 SQCLKKNSKERPTYPELMQHPF 313
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA++ IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ++ IG G+ G V A L VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + +TL EF L+ E +L ++ +L +L ++ +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A M+T T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-ACTNFMMTPYVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIHMG 313
Y D+WS+GCI E+ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ++ IG G+ G V A L VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 67 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK 120
H NII + +TL EF L+ E +L CQ + ME + +
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL-----------CQVIHMELDHERMSY 130
Query: 121 --YQKICLI----GEGSFGKVFKAIHLDLKKTVALKII 152
YQ +C I G + K ++ +K LKI+
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 12/211 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G +G+V+ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 187 HETLNEFVLITEFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSNRVLHR 241
F ++TE+ M NLL+ R++++ + + + + + SA+ YL +HR
Sbjct: 97 CTLEPPFYIVTEY--MPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
DL +N L+ ++ V + DFG +R M T+ + P+ + APE +A + +D+
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 301 WSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
W+ G + +EI G P+ + + + LL+
Sbjct: 215 WAFGVLLWEIATYGMSPYPGIDLSQVYDLLE 245
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G +G+V+ + TVA+K + + E+ +E + K + HPN+++ +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 77 HETLNEFVLITEF 89
F ++TE+
Sbjct: 97 CTLEPPFYIVTEY 109
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 15/256 (5%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
+IG G FGKV++A + + V + + +++QE ++ L HPNII
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV---LHRD 242
L+ EFA N + K++ I V + + YLH + +HRD
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRD 133
Query: 243 LKPQNVLL-----NKD---GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
LK N+L+ N D + + DFG AR T M S G +MAPE+I +
Sbjct: 134 LKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAYAWMAPEVIRASMF 191
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTF--PSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PF+ + L + + + PS E + L++
Sbjct: 192 SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCW 251
Query: 353 EKDASQRLSWPELLHH 368
D R S+ +L
Sbjct: 252 NPDPHSRPSFTNILDQ 267
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
+IG G FGKV++A + + V + + +++QE ++ L HPNII
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 76 SHETLNEFVLITEFAH 91
L+ EFA
Sbjct: 74 VCLKEPNLCLVMEFAR 89
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 51/303 (16%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 177 HPNIIKFI---ASHETLNEF---VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
H NII + ++L EF ++ E +L +++ +L +L ++ +
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGI 139
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+LHS ++HRDLKP N+++ D + DFG AR+ A + M+ T Y APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVVTRYYRAPEVIL 198
Query: 291 ERPYDHTADLWSLGCIAYEI---------------------HMGHP-PFKTVSILHLIRL 328
Y D+WS+GCI E+ +G P P + +R
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRN 258
Query: 329 LKTQ--------------DVTFPSQV------SETYKDLVKGLLEKDASQRLSWPELLHH 368
DV FP+ + +DL+ +L DAS+R+S E L H
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 369 PLV 371
P +
Sbjct: 319 PYI 321
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 19/195 (9%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
L++YQ + IG G+ G V A L++ VA+K +S+ ++ +E + K +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN 81
Query: 67 HPNIIKFI---ASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEK--Y 121
H NII + ++L EF + + M L N CQ ++ME + + Y
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDV--YIVMELMDA------NLCQVIQMELDHERMSYLLY 133
Query: 122 QKICLI----GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECE-IQKHLA 176
Q +C I G + K ++ +K LKI+ G + +S E E + ++
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD-FGLARTAGTSFMMEPEVVTRYYR 192
Query: 177 HPNIIKFIASHETLN 191
P +I + E ++
Sbjct: 193 APEVILGMGYKENVD 207
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T LT T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 134/279 (48%), Gaps = 49/279 (17%)
Query: 113 KSNGALEKYQKIC-LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
K N ++ Y+ ++G G GKV + + ++ ALK++ ++ ++E E+
Sbjct: 11 KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA-------RREVEL 63
Query: 172 QKHLAH-PNIIKFIASHETLNE-----FVLITEFAHMSLSNLLEQR--KKLSETICVQIL 223
+ P+I++ + +E L +++ L + ++ R + +E +I+
Sbjct: 64 HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLN---KDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ A+ YLHS + HRD+KP+N+L + + L DFGFA+
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------- 168
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----DVTF 336
E E+ YD + D+WSLG I Y + G+PPF + L + +KT+ F
Sbjct: 169 ------ETTGEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF 221
Query: 337 P----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV 371
P S+VSE K L++ LL+ + +QR++ E ++HP +
Sbjct: 222 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 22/252 (8%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+FG V KA K VA+K I + L+Q + HPNI+K
Sbjct: 15 VVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVN----HPNIVKLYG 68
Query: 186 SHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS---ALYYLHSNR---V 238
+ LN L+ E+A SL N+L + L +S + + YLHS + +
Sbjct: 69 A--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 239 LHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRDLKP N+LL G + +CDFG A + THM T+ KG+ +MAPE+ Y
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEK 183
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS---QVSETYKDLVKGLLEK 354
D++S G I +E+ PF + + + T P + + + L+ K
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSK 243
Query: 355 DASQRLSWPELL 366
D SQR S E++
Sbjct: 244 DPSQRPSMEEIV 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 35/300 (11%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSL-KQECEIQKHLAH 177
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
P +++ + + ++ E+ L NL+ + E + ++ AL +HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSM 192
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTPLYMAPELI----AE 291
+HRD+KP N+LL+K G L DFG M G + GTP Y++PE++ +
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--QDVTFP--SQVSETYKDL 347
Y D WS+G YE+ +G PF S++ + +TFP + +S+ K+L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 348 VKGLLEKDASQRL-------------------SWPELLH--HPLVKDNLSSEIESQNNQD 386
+ L D RL +W L P+V D LSS+I++ N D
Sbjct: 313 ICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD-LSSDIDTSNFDD 370
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAH 67
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 68 PNIIKFIASHETLNEFVLITEF 89
P +++ + + ++ E+
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEY 155
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 22/252 (8%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G G+FG V KA K VA+K I + L+Q + HPNI+K
Sbjct: 16 VVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVN----HPNIVKLYG 69
Query: 186 SHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLIS---ALYYLHSNR---V 238
+ LN L+ E+A SL N+L + L +S + + YLHS + +
Sbjct: 70 A--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 239 LHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+HRDLKP N+LL G + +CDFG A + THM T+ KG+ +MAPE+ Y
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQTHM-TNNKGSAAWMAPEVFEGSNYSEK 184
Query: 298 ADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS---QVSETYKDLVKGLLEK 354
D++S G I +E+ PF + + + T P + + + L+ K
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSK 244
Query: 355 DASQRLSWPELL 366
D SQR S E++
Sbjct: 245 DPSQRPSMEEIV 256
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 35/300 (11%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSL-KQECEIQKHLAH 177
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
P +++ + + ++ E+ L NL+ + E + ++ AL +HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSM 192
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTPLYMAPELI----AE 291
+HRD+KP N+LL+K G L DFG M G + GTP Y++PE++ +
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--QDVTFP--SQVSETYKDL 347
Y D WS+G YE+ +G PF S++ + +TFP + +S+ K+L
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 348 VKGLLEKDASQRL-------------------SWPELLH--HPLVKDNLSSEIESQNNQD 386
+ L D RL +W L P+V D LSS+I++ N D
Sbjct: 313 ICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD-LSSDIDTSNFDD 370
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAH 67
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 68 PNIIKFIASHETLNEFVLITEF 89
P +++ + + ++ E+
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEY 155
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 37/234 (15%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+ Y+ LIG GS+G V+ A + K VA+K +++ + + +E I L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 179 NIIKF---IASHETL--NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
II+ I + L +E ++ E A L L + L+E IL NL+ ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-------------------AVGTH-- 272
H + ++HRDLKP N LLN+D +CDFG AR++ G H
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 273 ----MLTSIKGTPLYMAPELI-AERPYDHTADLWSLGCIAYEI------HMGHP 315
LTS T Y APELI + Y ++ D+WS GCI E+ H+ +P
Sbjct: 208 NLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+ Y+ LIG GS+G V+ A + K VA+K +++ + + +E I L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 69 NIIK---FIASHETL--NEFVLITEFAHMSLSKL 97
II+ I + L +E ++ E A L KL
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKL 121
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 86
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 145
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T L T Y APE ++
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 142/309 (45%), Gaps = 26/309 (8%)
Query: 85 LITEFAHMSLSKL-------GEPWFHNHCQPVKMEKSNGALE-KYQKICLIGEGSFGKVF 136
L+ +HM LSK+ P H + K LE +YQ L+G G FG V+
Sbjct: 14 LVPRGSHMLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVY 73
Query: 137 KAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QKHLAHPNIIKFIASHETL 190
I + VA+K + K S G+ + + E+ + +I+ + E
Sbjct: 74 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 133
Query: 191 NEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNV 248
+ FVLI E L + + +R L E + ++ A+ + H+ VLHRD+K +N+
Sbjct: 134 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 193
Query: 249 LLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA-ERPYDHTADLWSLGCI 306
L++ + G L DFG + + T GT +Y PE I R + +A +WSLG +
Sbjct: 194 LIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 251
Query: 307 AYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELL 366
Y++ G PF+ H +++ Q V F +VS + L++ L S R ++ E+
Sbjct: 252 LYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQ 305
Query: 367 HHPLVKDNL 375
+HP ++D L
Sbjct: 306 NHPWMQDVL 314
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 87
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 146
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN +CDFG AR T L T Y APE ++
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 207 SKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 35/300 (11%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSL-KQECEIQKHLAH 177
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
P +++ + + ++ E+ L NL+ + E + ++ AL +HS
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSM 187
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTPLYMAPELI----AE 291
+HRD+KP N+LL+K G L DFG M G + GTP Y++PE++ +
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--QDVTFP--SQVSETYKDL 347
Y D WS+G YE+ +G PF S++ + +TFP + +S+ K+L
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 348 VKGLLEKDASQRL-------------------SWPELLH--HPLVKDNLSSEIESQNNQD 386
+ L D RL +W L P+V D LSS+I++ N D
Sbjct: 308 ICAFL-TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPD-LSSDIDTSNFDD 365
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAH 67
E Y+ + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 68 PNIIKFIASHETLNEFVLITEF 89
P +++ + + ++ E+
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEY 150
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 236
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 185
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 239
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 240 WCLALRPSDRPTFEEIQNHPWMQDVL 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 240
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 241
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 236
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 255
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 241
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 187
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 188 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 241
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 242 WCLALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 186
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 187 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 240
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 241 WCLALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ LIG GS+G V +A K+ VA+K I + + + +E I L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 179 NIIKFI-----ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
+++K + E +E ++ E A L L+E +L NL+ + Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP------------ 281
HS +LHRDLKP N L+N+D +CDFG AR++ + + + +P
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 282 ---------------LYMAPELI-AERPYDHTADLWSLGCIAYEI 310
Y APELI + Y D+WS+GCI E+
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ LIG GS+G V +A K+ VA+K I + + + +E I L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 69 NIIKFI-----ASHETLNEFVLITEFAHMSLSKL 97
+++K + E +E ++ E A KL
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKL 146
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKF-- 183
LIG GS+G V+ A + +K VA+K +++ + + +E I L II+
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 184 -IASHETL--NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLH 240
I + L +E ++ E A L L + L+E IL NL+ ++H + ++H
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIH 152
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSM----------------AVGTH------MLTSIK 278
RDLKP N LLN+D +CDFG AR++ G H LTS
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 279 GTPLYMAPELI-AERPYDHTADLWSLGCIAYEI 310
T Y APELI + Y + D+WS GCI E+
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK--- 72
LIG GS+G V+ A + +K VA+K +++ + + +E I L II+
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 73 FIASHETL--NEFVLITEFAHMSLSKL 97
I + L +E ++ E A L KL
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKL 119
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 268
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 257 WCLALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 201
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 202 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 255
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 256 WCLALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 283
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 221
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIR 275
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQDVL 301
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 62
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPS 210
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 62
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEY 84
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 209
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 210 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 263
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 264 WCLALRPSDRPTFEEIQNHPWMQDVL 289
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + IGEG++G V A K VA+K IS +L+ E +I H N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHEN 82
Query: 180 IIKF-----IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLH 234
II + E + + ++ + L LL+ + ++ IC L ++ L Y+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIH 141
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG---THMLTSIKGTPLYMAPE-LIA 290
S VLHRDLKP N+LLN + DFG AR T LT T Y APE ++
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 291 ERPYDHTADLWSLGCIAYEIHMGHPPF 317
+ Y + D+WS+GCI E+ P F
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 122 QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNI 180
+ I +G G++G V K H+ + +A+K I + S +E L + +I + + P
Sbjct: 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFT 68
Query: 181 IKFIASHETLNEFVLITEFAHMSLS----NLLEQRKKLSETICVQILSNLISALYYLHSN 236
+ F + + + E SL ++++ + + E I +I +++ AL +LHS
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 237 -RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI----AE 291
V+HRD+KP NVL+N G +CDFG + + P YMAPE I +
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP-YMAPERINPELNQ 187
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPFKT--VSILHLIRLLKTQDVTFPS-QVSETYKDLV 348
+ Y +D+WSLG E+ + P+ + L ++++ P+ + S + D
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFT 247
Query: 349 KGLLEKDASQRLSWPELLHHPL 370
L+K++ +R ++PEL+ HP
Sbjct: 248 SQCLKKNSKERPTYPELMQHPF 269
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 34/268 (12%)
Query: 121 YQKICLIGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+++I LIG G FG+VFKA H +D K V ++ + ++ +E+ +L + L H N
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAK-------LDHVN 65
Query: 180 IIKFIASHETLNE-----------------FVLITEFAHMSLSNLLEQRK--KLSETICV 220
I+ + + + F+ + +L +E+R+ KL + + +
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL 125
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
++ + + Y+HS ++++RDLKP N+ L + DFG S+ S KGT
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS-KGT 184
Query: 281 PLYMAPELIAERPYDHTADLWSLGCIAYE-IHMGHPPFKTVSILHLIRLLKTQDVTFPSQ 339
YM+PE I+ + Y DL++LG I E +H+ F+T +R D
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR-----DGIISDI 239
Query: 340 VSETYKDLVKGLLEKDASQRLSWPELLH 367
+ K L++ LL K R + E+L
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEILR 267
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 69
+++I LIG G FG+VFKA H +D K V ++ + ++ +E+ +L + L H N
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAK-------LDHVN 65
Query: 70 IIKF 73
I+ +
Sbjct: 66 IVHY 69
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 229
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 283
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 284 WCLALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++ITEF +LS L ++ L IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 146 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 264 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 307
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++ITEF
Sbjct: 86 NLLGACTKPGGPLMVITEF 104
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 34/341 (9%)
Query: 78 ETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKS-NGALEKYQKICLIGEGSFGKVF 136
+ LN VL +F + +K + + + + + VK + E Y + +IG G+FG+V
Sbjct: 33 DGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQ 92
Query: 137 KAIHLDLKKTVALKIISKSGRSGKELSSL-KQECEIQKHLAHPNIIKFIASHETLNEFVL 195
H +K A+K++SK + S+ +E +I P +++ + + +
Sbjct: 93 LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 152
Query: 196 ITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG 254
+ E+ L NL+ + E + ++ AL +HS ++HRD+KP N+LL+K G
Sbjct: 153 VMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG 211
Query: 255 VAMLCDFGFARSM-AVGTHMLTSIKGTPLYMAPELI----AERPYDHTADLWSLGCIAYE 309
L DFG M G + GTP Y++PE++ + Y D WS+G +E
Sbjct: 212 HLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFE 271
Query: 310 IHMGHPPFKTVSILHLIRLLKT--QDVTFP--SQVSETYKDLVKGLLEKDASQRLSW--- 362
+ +G PF S++ + + FP +++S+ K+L+ L D RL
Sbjct: 272 MLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFL-TDREVRLGRNGV 330
Query: 363 PELLHHPLVKDN-----------------LSSEIESQNNQD 386
E+ HP K++ LSS+I+S N D
Sbjct: 331 EEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDD 371
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS-LKQECEIQKHLAH 67
E Y + +IG G+FG+V H +K A+K++SK + S+ +E +I
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 68 PNIIKFIASHETLNEFVLITEF 89
P +++ + + ++ E+
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEY 156
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 182
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSSECQHLIR 236
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 178
+Y+ + +IG+G FG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 179 -----NIIKFIASHETLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALY 231
N+I + + N + E M+L L+++ K S + + +++ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 232 YLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
LH NR++H DLKP+N+LL + G + + F S + I+ + Y APE+I
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQ-SRFYRAPEVILG 273
Query: 292 RPYDHTADLWSLGCIAYEIHMGHP 315
Y D+WSLGCI E+ G+P
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGYP 297
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP- 68
+Y+ + +IG+G FG+V KA + + VALK++ R ++ + +E I +HL
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAA---EEIRILEHLRKQD 154
Query: 69 -----NIIKFIASHETLNEFVLITEFAHMSLSKL 97
N+I + + N + E M+L +L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYEL 188
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++ITEF +LS L ++ L IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 146 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 264 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 307
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++ITEF
Sbjct: 86 NLLGACTKPGGPLMVITEF 104
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSSECQHLIR 268
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSSECQHLIR 269
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++ITEF +LS L ++ L IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 146 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 264 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 307
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++ITEF
Sbjct: 86 NLLGACTKPGGPLMVITEF 104
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 19/222 (8%)
Query: 112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 171
E+S ++++Q + G+G+FG V +VA+K + + R + Q+ +
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV 75
Query: 172 QKHLAHPNIIKFIASHETLNE-------FVLITEFAHMSLSNLLE---QRKKLSETICVQ 221
L HPNI++ + TL E ++ E+ +L +R+ I ++
Sbjct: 76 ---LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIK 132
Query: 222 I-LSNLISALYYLH--SNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLTSI 277
+ L LI ++ LH S V HRD+KP NVL+N+ DG LCDFG A+ ++ + I
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 278 KGTPLYMAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFK 318
+ Y APELI + Y D+WS+GCI E+ +G P F+
Sbjct: 193 -CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 2 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI 61
E+S ++++Q + G+G+FG V +VA+K + + R + Q+ +
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV 75
Query: 62 QKHLAHPNIIKFIASHETLNE 82
L HPNI++ + TL E
Sbjct: 76 ---LHHPNIVQLQSYFYTLGE 93
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSSECQHLIR 268
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSXECQHLIR 269
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 47/281 (16%)
Query: 121 YQKICLIGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+++I LIG G FG+VFKA H +D K V ++ + ++ +E+ +L + L H N
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAK-------LDHVN 66
Query: 180 II-------KFIASHETLNE-----------------------FVLITEFAHMSLSNLLE 209
I+ F ET ++ F+ + +L +E
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 210 QRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM 267
+R+ KL + + +++ + + Y+HS +++HRDLKP N+ L + DFG S+
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 268 AVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYE-IHMGHPPFKTVSILHLI 326
T KGT YM+PE I+ + Y DL++LG I E +H+ F+T +
Sbjct: 187 K-NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDL 245
Query: 327 RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
R D + K L++ LL K R + E+L
Sbjct: 246 R-----DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR 281
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 11 YQKICLIGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 69
+++I LIG G FG+VFKA H +D K V ++ + ++ +E+ +L + L H N
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAK-------LDHVN 66
Query: 70 IIKF 73
I+ +
Sbjct: 67 IVHY 70
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSSECQHLIR 269
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 215
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 216 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSXECQHLIR 269
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 270 WCLALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 201 HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCD 260
HM + E R V + + L LH R+++RDLKP+N+LL+ G + D
Sbjct: 277 HMGQAGFPEARA-------VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISD 329
Query: 261 FGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF--- 317
G A + G + + GT YMAPE++ Y + D W+LGC+ YE+ G PF
Sbjct: 330 LGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
Query: 318 -KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL-----SWPELLHHPLV 371
K + + RL+K + + S + L LL KD ++RL S E+ HPL
Sbjct: 389 KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
Query: 372 K 372
K
Sbjct: 449 K 449
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 214
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H ++ Q V F +VS + L++
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIGGQ-VFFRQRVSXECQHLIR 268
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L S R ++ E+ +HP ++D L
Sbjct: 269 WCLALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--GKELSSLKQECEI----QK 173
+YQ L+G G FG V+ I + VA+K + K S G+ + + E+ +
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 174 HLAHPNIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALY 231
+I+ + E + FVLI E L + + +R L E + ++ A+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 232 YLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
+ H+ VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIR 202
Query: 291 -ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVK 349
R + +A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++
Sbjct: 203 YHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSXECQHLIR 256
Query: 350 GLLEKDASQRLSWPELLHHPLVKDNL 375
L R ++ E+ +HP ++D L
Sbjct: 257 WCLALRPXDRPTFEEIQNHPWMQDVL 282
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 201 HMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCD 260
HM + E R V + + L LH R+++RDLKP+N+LL+ G + D
Sbjct: 277 HMGQAGFPEAR-------AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISD 329
Query: 261 FGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF--- 317
G A + G + + GT YMAPE++ Y + D W+LGC+ YE+ G PF
Sbjct: 330 LGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
Query: 318 -KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL-----SWPELLHHPLV 371
K + + RL+K + + S + L LL KD ++RL S E+ HPL
Sbjct: 389 KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448
Query: 372 K 372
K
Sbjct: 449 K 449
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 38/273 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK--------------LSETICVQILSN 225
+ A + ++I EF +LS L ++ L IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF--Q 152
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-Y 283
+ + +L S + +HRDL +N+LL++ V +CDFG AR + + PL +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 212
Query: 284 MAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKTQDVT 335
MAPE I +R Y +D+WS G + +EI +G P+ V I L ++ D T
Sbjct: 213 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 272
Query: 336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHH 368
P ++ +T D G + SQR ++ EL+ H
Sbjct: 273 TP-EMYQTMLDCWHG----EPSQRPTFSELVEH 300
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 95 NLLGACTKPGGPLMVIVEF 113
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 85
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 86 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 136
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 137 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 194
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP 316
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRK------KLSETICVQILS--------- 224
+ A + ++I EF +LS L ++ K E + L+
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL- 282
+ + +L S + +HRDL +N+LL++ V +CDFG AR + + PL
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 283 YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKTQDV 334
+MAPE I +R Y +D+WS G + +EI +G P+ V I L ++ D
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 275
Query: 335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 276 TTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 316
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 96 NLLGACTKPGGPLMVIVEF 114
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINAMLNH 64
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS 212
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG++G+V A++ ++ VA+KI+ R+ ++K+E I L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINAMLNH 64
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEY 86
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ I IG G++G V A + VA+K I + +E +I KH H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 179 NII------KFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
NII + + ++ + L ++ + L+ L L+ L Y
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR----SMAVGTHMLTSIKGTPLYMAPEL 288
+HS +V+HRDLKP N+L+N++ + DFG AR S A + +T T Y APEL
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 289 -IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
++ Y DLWS+GCI E+ F + +H ++L+
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 275
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ I IG G++G V A + VA+K I + +E +I KH H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI IA + L V EF
Sbjct: 114 NI---IAIKDILRPTVPYGEF 131
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 58
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 59 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 167
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP 316
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 58
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 59 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 167
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP 316
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+E + + +GEG+ G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 178 PNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
N++KF N L E+ + L + +E + E + L++ + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPY 294
+ HRD+KP+N+LL++ + DFG A +L + GT Y+APEL+ R +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 295 -DHTADLWSLGCIAYEIHMGHPPFKTVS 321
D+WS G + + G P+ S
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS 211
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+E + + +GEG+ G+V A++ ++ VA+KI+ R+ ++K+E I K L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNH 63
Query: 68 PNIIKFIASHETLNEFVLITEF 89
N++KF N L E+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEY 85
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 146 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 264 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 307
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 86 NLLGACTKPGGPLMVIVEF 104
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 58
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 59 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 167
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP 316
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 35/215 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 58
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 59 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 109
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 167
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP 316
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 155 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 273 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 316
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 95 NLLGACTKPGGPLMVIVEF 113
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
++Y+ I IG G++G V A + VA+K I + +E +I KH H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 179 NII------KFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
NII + + ++ + L ++ + L+ L L+ L Y
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR----SMAVGTHMLTSIKGTPLYMAPEL 288
+HS +V+HRDLKP N+L+N++ + DFG AR S A + +T T Y APEL
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 234
Query: 289 -IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL 329
++ Y DLWS+GCI E+ F + +H ++L+
Sbjct: 235 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
++Y+ I IG G++G V A + VA+K I + +E +I KH H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI IA + L V EF
Sbjct: 115 NI---IAIKDILRPTVPYGEF 132
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ ++KI +G G+ G VFK IHL++K + +II +EL L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII-------RELQVL 120
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ ++ E I ++
Sbjct: 121 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKKAGRIPEQILGKV 171
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+I L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 172 SIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 229
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
YM+PE + Y +D+WS+G E+ +G P
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 38/270 (14%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG+FGKVF A +L T VA+K + + ++ ++E E+ +L H +I+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQREAELLTNLQHEHIV 80
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLL----------------EQRKKLSETICVQILS 224
KF + +++ E+ H L+ L + + +L + + I S
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 225 NLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM------AVGTHMLTSIK 278
+ S + YL S +HRDL +N L+ + + + DFG +R + VG H + I+
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLKTQDVTFP 337
+M PE I R + +D+WS G I +EI G P+ +S +I + V
Sbjct: 201 ----WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLER 256
Query: 338 SQV--SETYKDLVKGLLEKDASQRLSWPEL 365
+V E Y D++ G +++ QRL+ E+
Sbjct: 257 PRVCPKEVY-DVMLGCWQREPQQRLNIKEI 285
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 17 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG+FGKVF A +L T VA+K + + ++ ++E E+ +L H +I+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK--DFQREAELLTNLQHEHIV 80
Query: 72 KFIASHETLNEFVLITEFA-HMSLSKL 97
KF + +++ E+ H L+K
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKF 107
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG AR + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 60/303 (19%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+Y + +G G G VF A+ D K VA+K I + + + +E +I + L H N
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDN 69
Query: 180 IIKF--------------IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN 225
I+K + S LN ++ E+ L+N+LEQ L E + +
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQ 128
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLN-KDGVAMLCDFGFARSMAVGTHMLTSIKG----- 279
L+ L Y+HS VLHRDLKP N+ +N +D V + DFG AR M H S KG
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM--DPHY--SHKGHLSEG 184
Query: 280 --TPLYMAPE-LIAERPYDHTADLWSLGCIAYEIHMGHPPF-------------KTVSIL 323
T Y +P L++ Y D+W+ GCI E+ G F +++ ++
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 324 H---------LIRLLKTQDVTFPSQ--------VSETYKDLVKGLLEKDASQRLSWPELL 366
H +I + D+T P + +S D ++ +L RL+ E L
Sbjct: 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEAL 304
Query: 367 HHP 369
HP
Sbjct: 305 SHP 307
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 14/248 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 177
E ++ + +IG G+FG+V + K A+KI++K + E + ++E ++ +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 178 PNIIKF-IASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
I A + N ++++ + L LL + +L E + L+ ++ A+ +H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFA-RSMAVGTHMLTSIKGTPLYMAPELI----- 289
+HRD+KP N+L++ +G L DFG + M GT + GTP Y++PE++
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 290 AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--QDVTFPSQ---VSETY 344
+ Y D WSLG YE+ G PF S++ + + FP+Q VSE
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313
Query: 345 KDLVKGLL 352
KDL++ L+
Sbjct: 314 KDLIRRLI 321
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 157 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 274
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 275 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 318
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 97 NLLGACTKPGGPLMVIVEF 115
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 155 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 273 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 316
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 95 NLLGACTKPGGPLMVIVEF 113
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 155 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 273 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 316
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 95 NLLGACTKPGGPLMVIVEF 113
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKK------------------LSETICVQ 221
+ A + ++I EF +LS L ++ L IC
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 222 ILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT- 280
+ + +L S + +HRDL +N+LL++ V +CDFG AR + +
Sbjct: 192 F--QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKT 331
PL +MAPE I +R Y +D+WS G + +EI +G P+ V I L ++
Sbjct: 250 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 309
Query: 332 QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
D T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 310 PDYTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 353
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 132 NLLGACTKPGGPLMVIVEF 150
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 83/342 (24%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
+KY +G GSFG V + ++ K ALK + + R +E +I K L H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN------RELDIMKVLDHV 60
Query: 179 NIIKFIASHETL-------------------------------------NEFV-LITEFA 200
NIIK + T N+++ +I E+
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 201 HMSLSNLLEQRKKLSETICVQILS----NLISALYYLHSNRVLHRDLKPQNVLLN-KDGV 255
+L +L+ + +I + ++S L A+ ++HS + HRD+KPQN+L+N KD
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 256 AMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL-IAERPYDHTADLWSLGCIAYEIHMGH 314
LCDFG A+ + + I Y APEL + Y + DLWS+GC+ E+ +G
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 315 PPFKT-VSILHLIRLLKTQ----------------DVTFPSQVSETYK------------ 345
P F SI L+R+++ +V FP+ ++ ++
Sbjct: 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI 299
Query: 346 DLVKGLLEKDASQRLSWPELLHHPL---VKDNLSSEIESQNN 384
DL++ +L + R++ E + HP ++++ SE+++ +N
Sbjct: 300 DLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSN 341
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
+KY +G GSFG V + ++ K ALK + + R +E +I K L H
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYK------NRELDIMKVLDHV 60
Query: 69 NIIKFI 74
NIIK +
Sbjct: 61 NIIKLV 66
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 136/293 (46%), Gaps = 46/293 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQ---------ILSNLI--- 227
+ A + ++I EF +LS L R K +E + + L +LI
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 228 ----SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL 282
+ +L S + +HRDL +N+LL++ V +CDFG AR + + PL
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 283 -YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKTQD 333
+MAPE I +R Y +D+WS G + +EI +G P+ V I L ++ D
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 334 VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
T P ++ +T D G + SQR ++ EL+ H L + +++ QD
Sbjct: 275 YTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH------LGNLLQANAQQD 316
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 97 NLLGACTKPGGPLMVIVEF 115
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTYEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 17/240 (7%)
Query: 108 PVKMEKSNGALEKYQK----ICL-----IGEGSFGKVFKA-IHLDLKKTVALKIIS-KSG 156
P E N A+ ++ K C+ IG G FG+V + + K+ + + I + K+G
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG 68
Query: 157 RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRK-KL 214
+ K+ E I HPNII ++ITE+ + SL L + +
Sbjct: 69 YTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 215 SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML 274
+ V +L + S + YL +HRDL +N+L+N + V + DFG +R +
Sbjct: 129 TVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 275 TSIKGTPL---YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLK 330
+ +G + + APE IA R + +D+WS G + +E+ G P+ +S +I+ ++
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 248
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
+IG G FG+V + + K+ + + I + K+G + K+ E I HPNII
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 74 IASHETLNEFVLITEF 89
++ITE+
Sbjct: 96 EGVVTKCKPVMIITEY 111
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 108 PVKMEKSNGALEKYQK----ICL-----IGEGSFGKVFKAIHLDLKKT----VALKIISK 154
P E N A+ ++ K C+ IG G FG+V HL L VA+K + K
Sbjct: 13 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSG-HLKLPGKREIFVAIKTL-K 70
Query: 155 SGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKK 213
SG + K+ E I HPN+I ++ITEF + SL + L Q
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG 130
Query: 214 LSETI-CVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH 272
I V +L + + + YL +HRDL +N+L+N + V + DFG +R + T
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 273 --MLTSIKGTPL---YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLI 326
TS G + + APE I R + +D+WS G + +E+ G P+ ++ +I
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 327 RLLKTQDVTFP 337
++ QD P
Sbjct: 251 NAIE-QDYRLP 260
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 16 LIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+IG G FG+V HL L VA+K + KSG + K+ E I HPN+I
Sbjct: 40 VIGAGEFGEVCSG-HLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 72 KFIASHETLNEFVLITEF 89
++ITEF
Sbjct: 98 HLEGVVTKSTPVMIITEF 115
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLK--QECEIQKHL 175
L ++ I +G G FG VF+A + A+K I R EL+ K +E + L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKL 60
Query: 176 AHPNIIKFI-------------ASHETLNEFVLITEFAHMSLSNLLEQRKKLSE---TIC 219
HP I+++ S + ++ + +L + + R + E ++C
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 220 VQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-------AVGTH 272
+ I + A+ +LHS ++HRDLKP N+ D V + DFG +M V T
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 273 ML-----TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIR 327
M T GT LYM+PE I Y H D++SLG I +E+ PF T + +
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST-QMERVRT 236
Query: 328 LLKTQDVTFPSQVSETY 344
L +++ FP ++ Y
Sbjct: 237 LTDVRNLKFPPLFTQKY 253
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 49/275 (17%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFI 184
++G G+ G + D + +I+ + + +E+ L++ E HPN+I++
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDE------HPNVIRYF 84
Query: 185 ASHE--------------TLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISAL 230
+ + TL E+V +FAH+ L + +L S L
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-------------ITLLQQTTSGL 131
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGV-----AMLCDFGFARSMAVGTHML---TSIKGTPL 282
+LHS ++HRDLKP N+L++ AM+ DFG + +AVG H + + GT
Sbjct: 132 AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 283 YMAPELIAERPYD---HTADLWSLGCIAYEI--HMGHPPFKTVSILHLIRLLK-TQDVTF 336
++APE+++E + +T D++S GC+ Y + HP K++ I L + D
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH 251
Query: 337 PSQVSETY-KDLVKGLLEKDASQRLSWPELLHHPL 370
P + + ++L++ ++ D +R S +L HP
Sbjct: 252 PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 177
E ++ I +IG G+FG+V + ++ A+KI++K + E + ++E ++ L +
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV---LVN 146
Query: 178 PNIIKFIASHETLNE----FVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYY 232
+ A H + ++++ + L LL + KL E + + ++ A+
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK-GTPLYMAPELIAE 291
+H +HRD+KP NVLL+ +G L DFG M + +S+ GTP Y++PE++
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 292 RP-----YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS---QVS 341
Y D WSLG YE+ G PF S++ + + FPS VS
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 326
Query: 342 ETYKDLVKGLL 352
E KDL++ L+
Sbjct: 327 EEAKDLIQRLI 337
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 116/262 (44%), Gaps = 22/262 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG GSF V+K + + VA + + E K+E E K L HPNI++F S
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 187 HETLNE----FVLITEF-AHMSLSNLLEQRK----KLSETICVQILSNLISALYYLHSNR 237
E+ + VL+TE +L L++ K K+ + C QIL L +LH+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL----KGLQFLHTRT 149
Query: 238 --VLHRDLKPQNVLL-NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPY 294
++HRDLK N+ + G + D G A ++ GTP + APE E+ Y
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFXAPEXYEEK-Y 206
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---TFPSQVSETYKDLVKGL 351
D + D+++ G E P+ I T V +F K++++G
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 266
Query: 352 LEKDASQRLSWPELLHHPLVKD 373
+ ++ +R S +LL+H ++
Sbjct: 267 IRQNKDERYSIKDLLNHAFFQE 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
IG GSF V+K + + VA + + E K+E E K L HPNI++F S
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 77 HETLNE----FVLITE 88
E+ + VL+TE
Sbjct: 94 WESTVKGKKCIVLVTE 109
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G+G FG+ K H + + + +K + + + + +E ++ + L HPN++KFI
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR--TFLKEVKVMRCLEHPNVLKFIG 74
Query: 186 SHETLNEFVLITEFAHM-SLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDL 243
ITE+ +L +++ + + V ++ S + YLHS ++HRDL
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMA---VGTHMLTSIK-----------GTPLYMAPELI 289
N L+ ++ ++ DFG AR M L S+K G P +MAPE+I
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 290 AERPYDHTADLWSLGCIAYEI 310
R YD D++S G + EI
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEI 215
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G+G FG+ K H + + + +K + + + + +E ++ + L HPN++KFI
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR--TFLKEVKVMRCLEHPNVLKFIG 74
Query: 76 SHETLNEFVLITEF 89
ITE+
Sbjct: 75 VLYKDKRLNFITEY 88
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAH 177
E ++ I +IG G+FG+V + ++ A+KI++K + E + ++E ++ L +
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV---LVN 130
Query: 178 PNIIKFIASHETLNE----FVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYY 232
+ A H + ++++ + L LL + KL E + + ++ A+
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK-GTPLYMAPELIAE 291
+H +HRD+KP NVLL+ +G L DFG M + +S+ GTP Y++PE++
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 292 RP-----YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS---QVS 341
Y D WSLG YE+ G PF S++ + + FPS VS
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVS 310
Query: 342 ETYKDLVKGLL 352
E KDL++ L+
Sbjct: 311 EEAKDLIQRLI 321
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 22/276 (7%)
Query: 115 NGALEKYQ-------KICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ 167
GA E ++ I +G G++G V K H+ + A+K I + S +E L
Sbjct: 23 QGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS-QEQKRLLX 81
Query: 168 ECEIQKHLAH-PNIIKFIASHETLNEFVLITEFAHMSLS----NLLEQRKKLSETICVQI 222
+ +I P + F + + + E SL ++++ + + E I +I
Sbjct: 82 DLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKI 141
Query: 223 LSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
+++ AL +LHS V+HRD+KP NVL+N G CDFG + + P
Sbjct: 142 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
Query: 282 LYMAPELI----AERPYDHTADLWSLGCIAYEIHMGHPPFKT--VSILHLIRLLKTQDVT 335
Y APE I ++ Y +D+WSLG E+ + P+ + L ++++
Sbjct: 202 -YXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQ 260
Query: 336 FPS-QVSETYKDLVKGLLEKDASQRLSWPELLHHPL 370
P+ + S + D L+K++ +R ++PEL HP
Sbjct: 261 LPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 119 EKYQKICLIGEGSFGKVFKA-------------IHLDLKKTVALKIISKSGRSGKELSSL 165
+ +++I +G G+ G V K IHL++K + +II +EL L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII-------RELQVL 68
Query: 166 KQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM---SLSNLLEQRKKLSETICVQI 222
EC P I+ F + + E + E HM SL +L++ K++ E I ++
Sbjct: 69 -HECN------SPYIVGFYGAFYSDGEISICME--HMDGGSLDQVLKEAKRIPEEILGKV 119
Query: 223 LSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP 281
++ L YL ++++HRD+KP N+L+N G LCDFG + + M S GT
Sbjct: 120 SIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFVGTR 177
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
YMAPE + Y +D+WS+G E+ +G P
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 30/277 (10%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYH 92
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQIL--SNLISALYYLHS 235
+IIK+ E L ++ L +L + + S + +L + + YLH+
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--THMLTSIKGTPLYM-APELIAER 292
+HRDL +NVLL+ D + + DFG A+++ G + + +P++ APE + E
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 293 PYDHTADLWSLGCIAYEIHMGH------PPFK----------TVSILHLIRLL-KTQDVT 335
+ + +D+WS G YE+ + H PP K +++L L LL + + +
Sbjct: 213 KFYYASDVWSFGVTLYEL-LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 271
Query: 336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
P + L+K E +AS R ++ L+ P++K
Sbjct: 272 RPDKCPAEVYHLMKNCWETEASFRPTFENLI--PILK 306
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQHRSGWKQEIDILRTLYH 92
Query: 68 PNIIKF 73
+IIK+
Sbjct: 93 EHIIKY 98
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + ++ H + + EFA +++ +N +++K
Sbjct: 11 HLKLPGLRTYVDPHTYEDPTQTVHEFAK------------------ELDATNISIDK--- 49
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 50 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 167
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 168 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 227
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 228 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 110 EGVVTKSKPVMIVTEY 125
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + F+ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTFVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITE 88
+++TE
Sbjct: 112 EGVVTKSKPVMIVTE 126
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + ++ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTYVDPHTYEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G+G+ VF+ H A+K+ + + + +E E+ K L H NI+K A
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 186 SHE--TLNEFVLITEFAH-MSLSNLLEQRKK---LSETICVQILSNLISALYYLHSNRVL 239
E T VLI EF SL +LE+ L E+ + +L +++ + +L N ++
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 240 HRDLKPQNVL--LNKDG--VAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA----- 290
HR++KP N++ + +DG V L DFG AR + S+ GT Y+ P++
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 291 ---ERPYDHTADLWSLGCIAYEIHMGHPPFK 318
++ Y T DLWS+G Y G PF+
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G+G+ VF+ H A+K+ + + + +E E+ K L H NI+K A
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 76 SHE--TLNEFVLITEF 89
E T VLI EF
Sbjct: 75 IEEETTTRHKVLIMEF 90
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + ++ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTYVDPHTFEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE+ + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 112 EGVVTKSKPVMIVTEY 127
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 184 IASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVLHR 241
+++TE+ + SL + L + I V +L + S + YL +HR
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 142
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + +PE IA R + +
Sbjct: 143 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 299 DLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
D+WS G + +E+ G P+ +S +I+ +
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 83 EGVVTKSKPVMIVTEY 98
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G GSFG+V + A+K + +EL + L+ P I+ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAG-------LSSPRIVPLYGA 134
Query: 187 ---HETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+N F+ + E SL L++Q L E + L + L YLH+ R+LH D+
Sbjct: 135 VREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 244 KPQNVLLNKDGV-AMLCDFGFARSM---AVGTHMLTS--IKGTPLYMAPELIAERPYDHT 297
K NVLL+ DG A LCDFG A + +G +LT I GT +MAPE++ +P D
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 298 ADLWSLGCIAYEIHMGHPPF 317
D+WS C+ + G P+
Sbjct: 253 VDIWSSCCMMLHMLNGCHPW 272
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS----GRSGKELSSL----KQEC 169
+++Y+ LIG+GSFG+V KA ++ VA+KII ++ E+ L K +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 170 EIQKHLAHPNIIKFIASHETL-NEFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNL 226
E++ ++ H + H N L+ E +L +LL + +S + + +
Sbjct: 113 EMKYYIVH------LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 166
Query: 227 ISALYYLHSNR--VLHRDLKPQNVLL--NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL 282
+AL +L + ++H DLKP+N+LL K + DFG S +G + I+ +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQ-SRF 223
Query: 283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y +PE++ PYD D+WSLGCI E+H G P F
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKII 42
+++Y+ LIG+GSFG+V KA ++ VA+KII
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 87
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 127 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQ-----------------IL 223
K + +LI E+A + SL L + +K+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 224 SNLIS-------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS 276
+LIS + YL +++HRDL +N+L+ + + DFG +R + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 277 IKG-TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKT 331
+G P+ +MA E + + Y +D+WS G + +EI +G P+ + L LLKT
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 72 KFIASHETLNEFVLITEFA 90
K + +LI E+A
Sbjct: 90 KLYGACSQDGPLLLIVEYA 108
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G GSFG+V + A+K + +EL + L+ P I+ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAG-------LSSPRIVPLYGA 118
Query: 187 ---HETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+N F+ + E SL L++Q L E + L + L YLH+ R+LH D+
Sbjct: 119 VREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 244 KPQNVLLNKDGV-AMLCDFGFARSM---AVGTHMLTS--IKGTPLYMAPELIAERPYDHT 297
K NVLL+ DG A LCDFG A + +G +LT I GT +MAPE++ +P D
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 298 ADLWSLGCIAYEIHMGHPPF 317
D+WS C+ + G P+
Sbjct: 237 VDIWSSCCMMLHMLNGCHPW 256
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 34/238 (14%)
Query: 127 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQ-----------------IL 223
K + +LI E+A + SL L + +K+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 224 SNLIS-------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS 276
+LIS + YL +++HRDL +N+L+ + + DFG +R + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 277 IKG-TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKT 331
+G P+ +MA E + + Y +D+WS G + +EI +G P+ + L LLKT
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 72 KFIASHETLNEFVLITEFA 90
K + +LI E+A
Sbjct: 90 KLYGACSQDGPLLLIVEYA 108
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS----GRSGKELSSL----KQEC 169
+++Y+ LIG+GSFG+V KA ++ VA+KII ++ E+ L K +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 170 EIQKHLAHPNIIKFIASHETL-NEFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNL 226
E++ ++ H + H N L+ E +L +LL + +S + + +
Sbjct: 94 EMKYYIVH------LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 147
Query: 227 ISALYYLHSNR--VLHRDLKPQNVLL--NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL 282
+AL +L + ++H DLKP+N+LL K + DFG S +G + I+ +
Sbjct: 148 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG--SSCQLGQRIYQXIQ-SRF 204
Query: 283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y +PE++ PYD D+WSLGCI E+H G P F
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKII 42
+++Y+ LIG+GSFG+V KA ++ VA+KII
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 68
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 184 IASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVLHR 241
+++TE+ + SL + L + I V +L + S + YL +HR
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 159
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + +PE IA R + +
Sbjct: 160 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 219
Query: 299 DLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
D+WS G + +E+ G P+ +S +I+ +
Sbjct: 220 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 74 IASHETLNEFVLITEF 89
+++TE+
Sbjct: 100 EGVVTKSKPVMIVTEY 115
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS----GRSGKELSSL----KQEC 169
+++Y+ LIG+GSFG+V KA ++ VA+KII ++ E+ L K +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 170 EIQKHLAHPNIIKFIASHETL-NEFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNL 226
E++ ++ H + H N L+ E +L +LL + +S + + +
Sbjct: 113 EMKYYIVH------LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQM 166
Query: 227 ISALYYLHSNR--VLHRDLKPQNVLL--NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL 282
+AL +L + ++H DLKP+N+LL K + DFG S +G + I+ +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG--SSCQLGQRIYQXIQ-SRF 223
Query: 283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y +PE++ PYD D+WSLGCI E+H G P F
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKII 42
+++Y+ LIG+GSFG+V KA ++ VA+KII
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII 87
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
+IG G FG+V + + K+ + + I + K+G + K+ E I HPNII
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 184 IASHETLNEFVLITEFA-HMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHR 241
++ITE+ + SL L + + + V +L + S + YL +HR
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 134
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + APE IA R + +
Sbjct: 135 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 194
Query: 299 DLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLK 330
D+WS G + +E+ G P+ +S +I+ ++
Sbjct: 195 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 227
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
+IG G FG+V + + K+ + + I + K+G + K+ E I HPNII
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 74 IASHETLNEFVLITEF 89
++ITE+
Sbjct: 75 EGVVTKCKPVMIITEY 90
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 8/213 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
+IG G FG+V + + K+ + + I + K+G + K+ E I HPNII
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 184 IASHETLNEFVLITEFA-HMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHR 241
++ITE+ + SL L + + + V +L + S + YL +HR
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHR 140
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + APE IA R + +
Sbjct: 141 DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS 200
Query: 299 DLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLK 330
D+WS G + +E+ G P+ +S +I+ ++
Sbjct: 201 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 233
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
+IG G FG+V + + K+ + + I + K+G + K+ E I HPNII
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 74 IASHETLNEFVLITEF 89
++ITE+
Sbjct: 81 EGVVTKCKPVMIITEY 96
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQIL--SNLISALYYLHS 235
+IIK+ E E L ++ L +L + + S + +L + + YLHS
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--THMLTSIKGTPLYM-APELIAER 292
+HR+L +NVLL+ D + + DFG A+++ G + + +P++ APE + E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 293 PYDHTADLWSLGCIAYEIHMGH------PPFK----------TVSILHLIRLL-KTQDVT 335
+ + +D+WS G YE+ + H PP K +++L L LL + + +
Sbjct: 196 KFYYASDVWSFGVTLYEL-LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
P + L+K E +AS R ++ L+ P++K
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLI--PILK 289
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
+IIK+ E E L ++ L L
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 77
Query: 183 FIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS-NLISALYYLHSNRVLHR 241
I E ++++ + + L + LE+ K + + + + S + A+ YL S +HR
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 137
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +N+L+ L DFG +R + + S+ P+ +M+PE I R + +D+
Sbjct: 138 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 197
Query: 301 WSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDASQ 358
W +EI G PF + +I +L+ D + P L+ + D S
Sbjct: 198 WMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 257
Query: 359 RLSWPELL 366
R + EL+
Sbjct: 258 RPRFTELV 265
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 77
Query: 73 FIASHETLNEFVLITEFAHMSLS 95
I E ++++ + + L
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELG 100
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 73
Query: 183 FIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS-NLISALYYLHSNRVLHR 241
I E ++++ + + L + LE+ K + + + + S + A+ YL S +HR
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 133
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +N+L+ L DFG +R + + S+ P+ +M+PE I R + +D+
Sbjct: 134 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 193
Query: 301 WSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDASQ 358
W +EI G PF + +I +L+ D + P L+ + D S
Sbjct: 194 WMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 253
Query: 359 RLSWPELL 366
R + EL+
Sbjct: 254 RPRFTELV 261
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 73
Query: 73 FIASHETLNEFVLITEFAHMSLS 95
I E ++++ + + L
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELG 96
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G GSFG+V + A+K + +EL + L+ P I+ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAG-------LSSPRIVPLYGA 132
Query: 187 ---HETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+N F+ + E SL L++Q L E + L + L YLH+ R+LH D+
Sbjct: 133 VREGPWVNIFMELLEGG--SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 244 KPQNVLLNKDGV-AMLCDFGFARSM---AVGTHMLTS--IKGTPLYMAPELIAERPYDHT 297
K NVLL+ DG A LCDFG A + +G +LT I GT +MAPE++ +P D
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 298 ADLWSLGCIAYEIHMGHPPF 317
D+WS C+ + G P+
Sbjct: 251 VDIWSSCCMMLHMLNGCHPW 270
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 126 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 89
Query: 183 FIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILS-NLISALYYLHSNRVLHR 241
I E ++++ + + L + LE+ K + + + + S + A+ YL S +HR
Sbjct: 90 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHR 149
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADL 300
D+ +N+L+ L DFG +R + + S+ P+ +M+PE I R + +D+
Sbjct: 150 DIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDV 209
Query: 301 WSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDASQ 358
W +EI G PF + +I +L+ D + P L+ + D S
Sbjct: 210 WMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSD 269
Query: 359 RLSWPELL 366
R + EL+
Sbjct: 270 RPRFTELV 277
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
++GEG FG+V++ ++ + K VA+K K + E I K+L HP+I+K
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK-EKFMSEAVIMKNLDHPHIVK 89
Query: 73 FIASHETLNEFVLITEFAHMSLS 95
I E ++++ + + L
Sbjct: 90 LIGIIEEEPTWIIMELYPYGELG 112
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 64 HLAHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQK 123
HL P + ++ H + + EFA +++ +N +++K
Sbjct: 13 HLKLPGLRTYVDPHTYEDPTQTVHEFAK------------------ELDATNISIDK--- 51
Query: 124 ICLIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNII 181
++G G FG+V + L KK +++ I + K G + K+ E I HPNII
Sbjct: 52 --VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 182 KFIASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
+ +++TE + SL + L + I V +L + S + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDH 296
HRDL +N+L+N + V + DFG +R + + +G + + +PE IA R +
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229
Query: 297 TADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
+D+WS G + +E+ G P+ +S +I+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 74 IASHETLNEFVLITE 88
+++TE
Sbjct: 112 EGVVTKSKPVMIVTE 126
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 34/238 (14%)
Query: 127 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQ-----------------IL 223
K + +LI E+A + SL L + +K+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 224 SNLIS-------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS 276
+LIS + YL ++HRDL +N+L+ + + DFG +R + +
Sbjct: 150 GDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKR 209
Query: 277 IKG-TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKT 331
+G P+ +MA E + + Y +D+WS G + +EI +G P+ + L LLKT
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT 267
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG FGKV KA LK TVA+K++ K S EL L E + K + HP++I
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 72 KFIASHETLNEFVLITEFA 90
K + +LI E+A
Sbjct: 90 KLYGACSQDGPLLLIVEYA 108
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 184 IASHETLNEFVLITE-FAHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVLHR 241
+++TE + SL + L + I V +L + S + YL +HR
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHR 142
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + +PE IA R + +
Sbjct: 143 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 202
Query: 299 DLWSLGCIAYEI-HMGHPPFKTVSILHLIRLL 329
D+WS G + +E+ G P+ +S +I+ +
Sbjct: 203 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 73
++G G FG+V + L KK +++ I + K G + K+ E I HPNII+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 74 IASHETLNEFVLITE 88
+++TE
Sbjct: 83 EGVVTKSKPVMIVTE 97
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
++G+G+ VF+ H A+K+ + + + +E E+ K L H NI+K A
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 186 SHE--TLNEFVLITEFAH-MSLSNLLEQRKK---LSETICVQILSNLISALYYLHSNRVL 239
E T VLI EF SL +LE+ L E+ + +L +++ + +L N ++
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 240 HRDLKPQNVL--LNKDG--VAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA----- 290
HR++KP N++ + +DG V L DFG AR + + GT Y+ P++
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 291 ---ERPYDHTADLWSLGCIAYEIHMGHPPFK 318
++ Y T DLWS+G Y G PF+
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
++G+G+ VF+ H A+K+ + + + +E E+ K L H NI+K A
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 76 SHE--TLNEFVLITEF 89
E T VLI EF
Sbjct: 75 IEEETTTRHKVLIMEF 90
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 178 PNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQIL--SNLISALYYLHS 235
+IIK+ E E L ++ L +L + + S + +L + + YLH+
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--THMLTSIKGTPLYM-APELIAER 292
+HR+L +NVLL+ D + + DFG A+++ G + + +P++ APE + E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 293 PYDHTADLWSLGCIAYEIHMGH------PPFK----------TVSILHLIRLL-KTQDVT 335
+ + +D+WS G YE+ + H PP K +++L L LL + + +
Sbjct: 196 KFYYASDVWSFGVTLYEL-LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK 372
P + L+K E +AS R ++ L+ P++K
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLI--PILK 289
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+KI +GEG FGKV + + + VA+K + K+ + S KQE +I + L H
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWKQEIDILRTLYH 75
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKL 97
+IIK+ E E L ++ L L
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 29/222 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSN-------------- 225
+ + + ++ITE+ + L N L ++ ++ ET ++N
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL 282
+ + +L S +HRD+ +NVLL VA + DFG AR + ++ + +KG P+
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPV 230
Query: 283 -YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
+MAPE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTHGGPVLVITEY 131
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 29/222 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSN-------------- 225
+ + + ++ITE+ + L N L ++ ++ ET ++N
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL 282
+ + +L S +HRD+ +NVLL VA + DFG AR + ++ + +KG P+
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPV 230
Query: 283 -YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
+MAPE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTHGGPVLVITEY 131
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG+G FG V + K VA+K I + L+ E + L H N+++ +
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLA----EASVMTQLRHSNLVQLLGV 254
Query: 187 -HETLNEFVLITEF-AHMSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRD 242
E ++TE+ A SL + L R + L ++ ++ A+ YL N +HRD
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
L +NVL+++D VA + DFG + + + K + APE + E+ + +D+WS
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKE---ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 371
Query: 303 LGCIAYEIH-MGHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL 360
G + +EI+ G P+ + + ++ R+ K + P D++K DA+ R
Sbjct: 372 FGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRP 431
Query: 361 SWPEL 365
++ +L
Sbjct: 432 TFLQL 436
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 136/286 (47%), Gaps = 49/286 (17%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 181 IKFIASHETLNEFVLI--------TEFAHMSL------------SNLLEQRKKLSETICV 220
+++ A+ FV T F M NL +QR +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE-----YW 119
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA----RSMAV------- 269
++ ++ AL Y+HS ++HRDLKP N+ +++ + DFG A RS+ +
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 270 ---GTHMLTSIKGTPLYMAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL 325
+ LTS GT +Y+A E++ Y+ D++SLG I +E M +P + +++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE--MIYPFSTGMERVNI 237
Query: 326 IRLLKTQDVTFPSQVSETY----KDLVKGLLEKDASQRLSWPELLH 367
++ L++ + FP + K +++ L++ D ++R LL+
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 71 IKFIASHETLNEFV 84
+++ A+ FV
Sbjct: 65 VRYYAAWLERRNFV 78
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 136/286 (47%), Gaps = 49/286 (17%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 181 IKFIASHETLNEFVLI--------TEFAHMSL------------SNLLEQRKKLSETICV 220
+++ A+ FV T F M NL +QR +
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE-----YW 119
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA----RSMAV------- 269
++ ++ AL Y+HS ++HRDLKP N+ +++ + DFG A RS+ +
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 270 ---GTHMLTSIKGTPLYMAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL 325
+ LTS GT +Y+A E++ Y+ D++SLG I +E M +P + +++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE--MIYPFSTGMERVNI 237
Query: 326 IRLLKTQDVTFPSQVSETY----KDLVKGLLEKDASQRLSWPELLH 367
++ L++ + FP + K +++ L++ D ++R LL+
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYV 64
Query: 71 IKFIASHETLNEFV 84
+++ A+ FV
Sbjct: 65 VRYYAAWLERRNFV 78
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 126 LIGEGSFGKVFKAI--HLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG+V+K + KK V + I + K+G + K+ E I +H NII+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 183 FIASHETLNEFVLITEFA-HMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLH 240
++ITE+ + +L L E+ + S V +L + + + YL + +H
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHT 297
RDL +N+L+N + V + DFG +R + + G + + APE I+ R +
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230
Query: 298 ADLWSLGCIAYEIHM-GHPPFKTVS 321
+D+WS G + +E+ G P+ +S
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELS 255
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 16 LIGEGSFGKVFKAI--HLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG+V+K + KK V + I + K+G + K+ E I +H NII+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 73 FIASHETLNEFVLITEF 89
++ITE+
Sbjct: 111 LEGVISKYKPMMIITEY 127
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 125 CLIGEGSFGKVFKAIHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII- 181
C +G G++G V+KA D K ALK I +G S S +E + + L HPN+I
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVIS 82
Query: 182 --KFIASHETLNEFVL----------ITEFAHMSLSNLLEQRKKLSETICVQILSNLISA 229
K SH ++L I +F S +N ++ +L + +L ++
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN--KKPVQLPRGMVKSLLYQILDG 140
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGV----AMLCDFGFARSMAVGTHMLTSIKG---TPL 282
++YLH+N VLHRDLKP N+L+ +G + D GFAR L + T
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFW 200
Query: 283 YMAPE-LIAERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y APE L+ R Y D+W++GCI E+ P F
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 42/275 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 181
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 182 KFI-ASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQ-------ILSNLI----- 227
+ A + ++I EF +LS L R K +E + + L +LI
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 228 --SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL 282
+ +L S + +HRDL +N+LL++ V + DFG AR + + KG PL
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR--KGDARLPL 210
Query: 283 -YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-------LHLIRLLKTQD 333
+MAPE I +R Y +D+WS G + +EI +G P+ V I L ++ D
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD 270
Query: 334 VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH 368
T P ++ +T D G + SQR ++ EL+ H
Sbjct: 271 YTTP-EMYQTMLDCWHG----EPSQRPTFSELVEH 300
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFI-ASHETLNEFVLITEF 89
+ A + ++I EF
Sbjct: 95 NLLGACTKPGGPLMVIVEF 113
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG+V + + KK VA+K + K G + ++ E I HPNII+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 183 FIASHETLNEFVLITEFA-HMSLSNLLE-QRKKLSETICVQILSNLISALYYLHSNRVLH 240
+++TEF + +L + L + + V +L + S + YL +H
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKG-TPL-YMAPELIAERPYD 295
RDL +N+L+N + V + DFG +R + + T S+ G P+ + APE IA R +
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 296 HTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQDVTF--PSQVSETYKDLVKGLL 352
+D WS G + +E+ G P+ +S +I ++ QD P + L+
Sbjct: 200 SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPPPPDCPTSLHQLMLDCW 258
Query: 353 EKDASQRLSWPELL 366
+KD + R +P+++
Sbjct: 259 QKDRNARPRFPQVV 272
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG+V + + KK VA+K + K G + ++ E I HPNII+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 73 FIASHETLNEFVLITEF 89
+++TEF
Sbjct: 80 LEGVVTNSMPVMILTEF 96
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 17/274 (6%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG+V + + KK VA+K + K G + ++ E I HPNII+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 183 FIASHETLNEFVLITEFA-HMSLSNLLE-QRKKLSETICVQILSNLISALYYLHSNRVLH 240
+++TEF + +L + L + + V +L + S + YL +H
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SIKG-TPL-YMAPELIAERPYD 295
RDL +N+L+N + V + DFG +R + + T S+ G P+ + APE IA R +
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 296 HTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQDVTF--PSQVSETYKDLVKGLL 352
+D WS G + +E+ G P+ +S +I ++ QD P + L+
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPPPPDCPTSLHQLMLDCW 260
Query: 353 EKDASQRLSWPELLH--HPLVKDNLSSEIESQNN 384
+KD + R +P+++ ++++ S +I ++ N
Sbjct: 261 QKDRNARPRFPQVVSALDKMIRNPASLKIVAREN 294
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 16 LIGEGSFGKVFKA-IHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG+V + + KK VA+K + K G + ++ E I HPNII+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 73 FIASHETLNEFVLITEF 89
+++TEF
Sbjct: 82 LEGVVTNSMPVMILTEF 98
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG+G FG V + K VA+K I + L+ E + L H N+++ +
Sbjct: 29 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLA----EASVMTQLRHSNLVQLLGV 82
Query: 187 -HETLNEFVLITEF-AHMSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRD 242
E ++TE+ A SL + L R + L ++ ++ A+ YL N +HRD
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
L +NVL+++D VA + DFG + + + K + APE + E+ + +D+WS
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKE---ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 199
Query: 303 LGCIAYEIH-MGHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL 360
G + +EI+ G P+ + + ++ R+ K + P +++K DA+ R
Sbjct: 200 FGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRP 259
Query: 361 SWPEL 365
S+ +L
Sbjct: 260 SFLQL 264
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)
Query: 126 LIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+IG G FG+V HL L VA+K + KSG + K+ E I HPN+I
Sbjct: 14 VIGAGEFGEVCSG-HLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVL 239
++ITEF + SL + L Q I V +L + + + YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPL---YMAPELIAERPY 294
HR L +N+L+N + V + DFG +R + T TS G + + APE I R +
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 295 DHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQDVTFP 337
+D+WS G + +E+ G P+ ++ +I ++ QD P
Sbjct: 192 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLP 234
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 16 LIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+IG G FG+V HL L VA+K + KSG + K+ E I HPN+I
Sbjct: 14 VIGAGEFGEVCSG-HLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 72 KFIASHETLNEFVLITEF 89
++ITEF
Sbjct: 72 HLEGVVTKSTPVMIITEF 89
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G GSFG+V + A+K + +EL + L P I+ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAG-------LTSPRIVPLYGA 134
Query: 187 ---HETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+N F+ + E SL L++++ L E + L + L YLHS R+LH D+
Sbjct: 135 VREGPWVNIFMELLEGG--SLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 244 KPQNVLLNKDGV-AMLCDFGFA---RSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHT 297
K NVLL+ DG A LCDFG A + +G +LT I GT +MAPE++ R D
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAK 252
Query: 298 ADLWSLGCIAYEIHMG-HP 315
D+WS C+ + G HP
Sbjct: 253 VDVWSSCCMMLHMLNGCHP 271
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G GSFG+V + A+K + +EL + L P I+ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAG-------LTSPRIVPLYGA 153
Query: 187 ---HETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+N F+ + E SL L++++ L E + L + L YLHS R+LH D+
Sbjct: 154 VREGPWVNIFMELLEGG--SLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 244 KPQNVLLNKDGV-AMLCDFGFA---RSMAVGTHMLTS--IKGTPLYMAPELIAERPYDHT 297
K NVLL+ DG A LCDFG A + +G +LT I GT +MAPE++ R D
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAK 271
Query: 298 ADLWSLGCIAYEIHMG-HP 315
D+WS C+ + G HP
Sbjct: 272 VDVWSSCCMMLHMLNGCHP 290
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG+G FG V + K VA+K I + L+ E + L H N+++ +
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLA----EASVMTQLRHSNLVQLLGV 67
Query: 187 -HETLNEFVLITEF-AHMSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRD 242
E ++TE+ A SL + L R + L ++ ++ A+ YL N +HRD
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
L +NVL+++D VA + DFG + + + K + APE + E+ + +D+WS
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKE---ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 303 LGCIAYEIH-MGHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL 360
G + +EI+ G P+ + + ++ R+ K + P +++K DA+ R
Sbjct: 185 FGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRP 244
Query: 361 SWPEL 365
S+ +L
Sbjct: 245 SFLQL 249
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 127 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG+FGKVF A +L K VA+K + + + ++ +E E+ +L H +I+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK--DFHREAELLTNLQHEHIV 78
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQR-------------KKLSETICVQILSNLI 227
KF + +++ E+ H L+ L +L+++ + I +
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM------AVGTHMLTSIKGTP 281
+ + YL S +HRDL +N L+ ++ + + DFG +R + VG H + I+
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR--- 195
Query: 282 LYMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLKTQDV-TFPSQ 339
+M PE I R + +D+WSLG + +EI G P+ +S +I + V P
Sbjct: 196 -WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRT 254
Query: 340 VSETYKDLVKGLLEKDASQR 359
+ +L+ G +++ R
Sbjct: 255 CPQEVYELMLGCWQREPHMR 274
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 17 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG+FGKVF A +L K VA+K + + + ++ +E E+ +L H +I+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK--DFHREAELLTNLQHEHIV 78
Query: 72 KFIASHETLNEFVLITEFA-HMSLSKL 97
KF + +++ E+ H L+K
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKF 105
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G+FG+VF VA+K ++ + L QE I K +HPNI++ I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLIGV 180
Query: 187 HETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
++ E L+ L + +L +Q++ + + + YL S +HRDL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT-SIKGTPL-YMAPELIAERPYDHTADLWS 302
+N L+ + V + DFG +R A G + + ++ P+ + APE + Y +D+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 303 LGCIAYE-IHMGHPPFKTVS 321
G + +E +G P+ +S
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG G+FG+VF VA+K ++ + L QE I K +HPNI++ I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLIG 179
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 15/245 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG+G FG V + K VA+K I + L+ E + L H N+++ +
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFLA----EASVMTQLRHSNLVQLLGV 73
Query: 187 -HETLNEFVLITEF-AHMSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRD 242
E ++TE+ A SL + L R + L ++ ++ A+ YL N +HRD
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWS 302
L +NVL+++D VA + DFG + + + K + APE + E + +D+WS
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKE---ASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 303 LGCIAYEIH-MGHPPFKTVSILHLI-RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL 360
G + +EI+ G P+ + + ++ R+ K + P +++K DA+ R
Sbjct: 191 FGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRP 250
Query: 361 SWPEL 365
S+ +L
Sbjct: 251 SFLQL 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 31/224 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRK----------------KLSETICVQIL 223
+ + + ++ITE+ + L N L +++ +LS +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT--- 280
S + + +L S +HRD+ +NVLL VA + DFG AR + ++ + +KG
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARL 230
Query: 281 PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
P+ +MAPE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 274
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTHGGPVLVITEY 131
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 72
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADLW 301
+N L+N GV + DFG +R + + TS +G+ + PE++ + +D+W
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEY--TSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 302 SLGCIAYEIH-MGHPPFKTVS 321
+ G + +EI+ +G P++ +
Sbjct: 191 AFGVLMWEIYSLGKMPYERFT 211
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 35/228 (15%)
Query: 177 HPNIIKFIASHETLNEFVLIT-EFAHMSLSNLLEQRKKLSETICVQ-------ILSNLIS 228
HPN+I++ S ET + F+ I E +++L +L+E + E + +Q +L + S
Sbjct: 86 HPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 229 ALYYLHSNRVLHRDLKPQNVLLN---------KDGVA----MLCDFGFARSMAVGTHM-- 273
+ +LHS +++HRDLKPQN+L++ + G ++ DFG + + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 274 --LTSIKGTPLYMAPELIAE---RPYDHTADLWSLGCIAYEI-HMGHPPF-----KTVSI 322
L + GT + APEL+ E R + D++S+GC+ Y I G PF + +I
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 264
Query: 323 LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPL 370
+ I L + DL+ +++ D +R + ++L HPL
Sbjct: 265 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQR----------KKLSETICVQILSNLISA 229
+ + + ++ITE+ + L N L ++ + L + S +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL-YMA 285
+ +L S +HRD+ +NVLL VA + DFG AR + ++ + +KG P+ +MA
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPVKWMA 230
Query: 286 PELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
PE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 268
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTHGGPVLVITEY 131
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 35/228 (15%)
Query: 177 HPNIIKFIASHETLNEFVLIT-EFAHMSLSNLLEQRKKLSETICVQ-------ILSNLIS 228
HPN+I++ S ET + F+ I E +++L +L+E + E + +Q +L + S
Sbjct: 86 HPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 229 ALYYLHSNRVLHRDLKPQNVLLN---------KDGVA----MLCDFGFARSMAVGTHM-- 273
+ +LHS +++HRDLKPQN+L++ + G ++ DFG + + G
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 274 --LTSIKGTPLYMAPELIAE---RPYDHTADLWSLGCIAYEI-HMGHPPF-----KTVSI 322
L + GT + APEL+ E R + D++S+GC+ Y I G PF + +I
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 264
Query: 323 LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPL 370
+ I L + DL+ +++ D +R + ++L HPL
Sbjct: 265 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 26/200 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
LIG G FGKV+K + D K VALK ++ S + + + E E HP+++ I
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK-VALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 186 SHETLNEFVLITEFA-------HMSLSNL------LEQRKKLSETICVQILSNLISALYY 232
+ NE +LI ++ H+ S+L EQR + IC+ L+Y
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE----ICI----GAARGLHY 154
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA-RSMAVG-THMLTSIKGTPLYMAPELIA 290
LH+ ++HRD+K N+LL+++ V + DFG + + +G TH+ +KGT Y+ PE
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 291 ERPYDHTADLWSLGCIAYEI 310
+ +D++S G + +E+
Sbjct: 215 KGRLTEKSDVYSFGVVLFEV 234
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
LIG G FGKV+K + D K VALK ++ S + + + E E HP+++ I
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK-VALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 76 SHETLNEFVLITEF 89
+ NE +LI ++
Sbjct: 103 FCDERNEMILIYKY 116
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 8/213 (3%)
Query: 126 LIGEGSFGKVFKA-IHLDLKKTVALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
+IG G FG+V + L K+ + + I + K G + K+ E I HPNII
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 184 IASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRVLHR 241
+++TE+ + SL L++ I V +L + + + YL +HR
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHR 148
Query: 242 DLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTA 298
DL +N+L+N + V + DFG +R + + +G + + APE IA R + +
Sbjct: 149 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSAS 208
Query: 299 DLWSLGCIAYE-IHMGHPPFKTVSILHLIRLLK 330
D+WS G + +E + G P+ ++ +I+ ++
Sbjct: 209 DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE 241
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 25/218 (11%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQR----------KKLSETICVQILSNLISA 229
+ + + ++ITE+ + L N L ++ + L + S +
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 230 LYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL-YMA 285
+ +L S +HRD+ +NVLL VA + DFG AR + ++ + +KG P+ +MA
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARLPVKWMA 222
Query: 286 PELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
PE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 260
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 105 VNLLGACTHGGPVLVITEY 123
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 115/229 (50%), Gaps = 18/229 (7%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G + YQ + +G G + +VF+AI++ + V +KI+ ++ +K+E +I ++L
Sbjct: 34 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKILENL 88
Query: 176 -AHPNIIKF--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYY 232
PNII I L+ F H++ ++ + + L++ + ++ AL Y
Sbjct: 89 RGGPNIITLADIVKDPVSRTPALV--FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE 291
HS ++HRD+KP NV+++ + + L D+G A G + + + PEL+ +
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVD 205
Query: 292 -RPYDHTADLWSLGCIAYEIHMGHPPF-----KTVSILHLIRLLKTQDV 334
+ YD++ D+WSLGC+ + PF ++ + ++L T+D+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
G + YQ + +G G + +VF+AI++ + V +KI+ + + +K+E +I ++L
Sbjct: 34 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----NKIKREIKILENL 88
Query: 66 -AHPNII 71
PNII
Sbjct: 89 RGGPNII 95
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 6/200 (3%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G+FG+VF VA+K ++ + L QE I K +HPNI++ I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLIGV 180
Query: 187 HETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
++ E L+ L + +L +Q++ + + + YL S +HRDL
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLT-SIKGTPL-YMAPELIAERPYDHTADLWS 302
+N L+ + V + DFG +R A G + ++ P+ + APE + Y +D+WS
Sbjct: 241 ARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 303 LGCIAYE-IHMGHPPFKTVS 321
G + +E +G P+ +S
Sbjct: 301 FGILLWETFSLGASPYPNLS 320
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
IG G+FG+VF VA+K ++ + L QE I K +HPNI++ I
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL-QEARILKQYSHPNIVRLIG 179
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 100 PWFHNHCQPVKMEKSNGALEKYQK----ICL-----IGEGSFGKVFKA-IHLDLKKTVAL 149
P + P E N A+ ++ K C+ IG G FG+V + L K+ VA+
Sbjct: 15 PGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAV 74
Query: 150 KIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLL 208
I + K G + K+ E I HPN++ +++ EF +
Sbjct: 75 AIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 209 EQRKKLSETIC--VQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS 266
++ T+ V +L + + + YL +HRDL +N+L+N + V + DFG +R
Sbjct: 135 LRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 194
Query: 267 MAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSI 322
+ + + G + + APE I R + +D+WS G + +E+ G P+ +S
Sbjct: 195 IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
Query: 323 LHLIRLLK 330
+I+ ++
Sbjct: 255 QDVIKAIE 262
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 26/200 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
LIG G FGKV+K + D K VALK ++ S + + + E E HP+++ I
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK-VALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 186 SHETLNEFVLITEFA-------HMSLSNL------LEQRKKLSETICVQILSNLISALYY 232
+ NE +LI ++ H+ S+L EQR + IC+ L+Y
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE----ICI----GAARGLHY 154
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV--GTHMLTSIKGTPLYMAPELIA 290
LH+ ++HRD+K N+LL+++ V + DFG ++ TH+ +KGT Y+ PE
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI 214
Query: 291 ERPYDHTADLWSLGCIAYEI 310
+ +D++S G + +E+
Sbjct: 215 KGRLTEKSDVYSFGVVLFEV 234
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
LIG G FGKV+K + D K VALK ++ S + + + E E HP+++ I
Sbjct: 46 LIGHGVFGKVYKGVLRDGAK-VALK--RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 76 SHETLNEFVLITEF 89
+ NE +LI ++
Sbjct: 103 FCDERNEMILIYKY 116
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 126/275 (45%), Gaps = 36/275 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHL-AHPN 179
++G G+FGKV A + KT VA+K++ + S E +L E ++ L +H N
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-SEREALMSELKMMTQLGSHEN 110
Query: 180 IIKFIASHETLNEFVLITEFA-HMSLSNLL--------------EQRKKLSETICVQILS 224
I+ + + LI E+ + L N L E +K+L E + +L+
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 225 ---------NLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS-MAVGTHML 274
+ + +L +HRDL +NVL+ V +CDFG AR M+ +++
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 275 TSIKGTPL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKT 331
P+ +MAPE + E Y +D+WS G + +EI +G P+ + + + +L++
Sbjct: 231 RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN 290
Query: 332 Q-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPEL 365
+ P +E +++ D+ +R S+P L
Sbjct: 291 GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 16 LIGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHL-AHPN 69
++G G+FGKV A + KT VA+K++ + S E +L E ++ L +H N
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-SEREALMSELKMMTQLGSHEN 110
Query: 70 IIKFIASHETLNEFVLITEF 89
I+ + + LI E+
Sbjct: 111 IVNLLGACTLSGPIYLIFEY 130
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 12 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 67
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+N GV + DFG +R + + + P+ + PE++ + +D+W+
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 304 GCIAYEIH-MGHPPFKTVS 321
G + +EI+ +G P++ +
Sbjct: 188 GVLMWEIYSLGKMPYERFT 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 16 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 71
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 131
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+N GV + DFG +R + + + P+ + PE++ + +D+W+
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 304 GCIAYEIH-MGHPPFKTVS 321
G + +EI+ +G P++ +
Sbjct: 192 GVLMWEIYSLGKMPYERFT 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 17 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 72
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+N GV + DFG +R + + + P+ + PE++ + +D+W+
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 304 GCIAYEIH-MGHPPFKTVS 321
G + +EI+ +G P++ +
Sbjct: 193 GVLMWEIYSLGKMPYERFT 211
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 56/295 (18%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLK---------QECEIQKHLA 176
I GS+G V + + VA+K + + G+ ++ L +E + H
Sbjct: 29 FISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 177 HPNIIK----FIASHE-TLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILSNLISAL 230
HPNI+ F+ E +++ L+TE L+ ++ +QR +S + +++ L
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR---SMAVGTHMLTSIKGTPLYMAPE 287
+ LH V+HRDL P N+LL + +CDF AR + A TH +T Y APE
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWYRAPE 203
Query: 288 LIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVT-FPS 338
L+ + + + D+WS GC+ E+ F+ + I+ ++ K +DV F S
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS 263
Query: 339 QVSETY------------------------KDLVKGLLEKDASQRLSWPELLHHP 369
+ Y DL+ +LE + +R+S + L HP
Sbjct: 264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 23 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 78
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+N GV + DFG +R + + + P+ + PE++ + +D+W+
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 304 GCIAYEIH-MGHPPFKTVS 321
G + +EI+ +G P++ +
Sbjct: 199 GVLMWEIYSLGKMPYERFT 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 130/282 (46%), Gaps = 31/282 (10%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 76
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYM-APELIAERPYD 295
+HR+L +N+L+ + + DFG + + + + +P++ APE + E +
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 197 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 256
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSSEI 379
+ ++ + +QR S+ +L L ++DN++ E
Sbjct: 257 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGEF 298
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 76
Query: 73 F 73
+
Sbjct: 77 Y 77
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 56/295 (18%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLK---------QECEIQKHLA 176
I GS+G V + + VA+K + + G+ ++ L +E + H
Sbjct: 29 FISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 177 HPNIIK----FIASHE-TLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILSNLISAL 230
HPNI+ F+ E +++ L+TE L+ ++ +QR +S + +++ L
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR---SMAVGTHMLTSIKGTPLYMAPE 287
+ LH V+HRDL P N+LL + +CDF AR + A TH +T Y APE
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWYRAPE 203
Query: 288 LIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQDVT-FPS 338
L+ + + + D+WS GC+ E+ F+ + I+ ++ K +DV F S
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS 263
Query: 339 QVSETY------------------------KDLVKGLLEKDASQRLSWPELLHHP 369
+ Y DL+ +LE + +R+S + L HP
Sbjct: 264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI EF + SL L++ K+ + I +Q S + + YL + R
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 258
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 73 F 73
+
Sbjct: 79 Y 79
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG--TPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 73 F 73
+
Sbjct: 76 Y 76
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 87
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+N GV + DFG +R + + + P+ + PE++ + +D+W+
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 304 GCIAYEIH-MGHPPFKTVS 321
G + +EI+ +G P++ +
Sbjct: 208 GVLMWEIYSLGKMPYERFT 226
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 258
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 73 F 73
+
Sbjct: 79 Y 79
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S ++ +E E+ L+HP +++
Sbjct: 16 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFI---EEAEVMMKLSHPKLVQLYGV 71
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+TEF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDL 130
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 189 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 233
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 80
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 201 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 260
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 261 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 80
Query: 73 F 73
+
Sbjct: 81 Y 81
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 82
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 203 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 262
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 263 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 82
Query: 73 F 73
+
Sbjct: 83 Y 83
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 81
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 202 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 261
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 262 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 81
Query: 73 F 73
+
Sbjct: 82 Y 82
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 73 F 73
+
Sbjct: 76 Y 76
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 179 NIIKFIASHETLNEFVLITEFAH--MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN 236
+I+ + E + FVLI E L + + +R L E + ++ A+ + H+
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 237 RVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA-ERPY 294
VLHRD+K +N+L++ + G L DFG + + T GT +Y PE I R +
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK 354
+A +WSLG + Y++ G PF+ H +++ Q V F +VS + L++ L
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFE-----HDEEIIRGQ-VFFRQRVSSECQHLIRWCLAL 288
Query: 355 DASQRLSWPELLHHPLVKDNL 375
S R ++ E+ +HP ++D L
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVL 309
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 74
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 195 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 254
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLS 376
+ ++ + +QR S+ +L L ++DN++
Sbjct: 255 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 74
Query: 73 F 73
+
Sbjct: 75 Y 75
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 256 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 75
Query: 73 F 73
+
Sbjct: 76 Y 76
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 79
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 200 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 259
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 260 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 299
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 79
Query: 73 F 73
+
Sbjct: 80 Y 80
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 273
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 274 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 73 F 73
+
Sbjct: 94 Y 94
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 39/232 (16%)
Query: 177 HPNIIKFIASHETLNEFVLIT-EFAHMSLSNLLEQRKKLSETICVQ-------ILSNLIS 228
HPN+I++ S ET + F+ I E +++L +L+E + E + +Q +L + S
Sbjct: 68 HPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 229 ALYYLHSNRVLHRDLKPQNVLLN---------KDGVA----MLCDFGFARSMAVGTHM-- 273
+ +LHS +++HRDLKPQN+L++ + G ++ DFG + + G
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 274 --LTSIKGTPLYMAPELIAE-------RPYDHTADLWSLGCIAYEI-HMGHPPF-----K 318
L + GT + APEL+ E R + D++S+GC+ Y I G PF +
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 319 TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPL 370
+I+ I L + DL+ +++ D +R + ++L HPL
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 120 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L H
Sbjct: 18 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 74
Query: 178 -PNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKL------------SETICVQIL 223
PNII + + E L E+A H +L + L + + L + T+ Q L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 224 ----SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+++ + YL + +HRDL +N+L+ ++ VA + DFG +R V ++ ++
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGR 192
Query: 280 TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLI-RLLKTQDVTF 336
P+ +MA E + Y +D+WS G + +EI +G P+ ++ L +L + +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 252
Query: 337 PSQVSETYKDLVKGLLEKDASQRLSWPELL 366
P + DL++ + +R S+ ++L
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 10 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLA- 66
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L
Sbjct: 18 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 74
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
HPNII + + E L E+A
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYA 98
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E +E ++ +L+H +++
Sbjct: 32 LGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFI---EEAKVMMNLSHEKLVQLYGV 87
Query: 187 HETLNEFVLITEF-AHMSLSNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+ITE+ A+ L N L E R + +++ ++ A+ YL S + LHRDL
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 245 PQNVLLNKDGVAMLCDFGFAR-------SMAVGTHMLTSIKGTPLYMAPELIAERPYDHT 297
+N L+N GV + DFG +R + +VG+ ++ +P PE++ +
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSP----PEVLMYSKFSSK 201
Query: 298 ADLWSLGCIAYEIH-MGHPPFKTVS 321
+D+W+ G + +EI+ +G P++ +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFT 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V + ++ KK VA+K++ K G + + +E +I L +P I++ I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 185 ASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
+ +L+ E A + L+ +R+++ + ++L + + YL +HRD
Sbjct: 77 GVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPL-YMAPELIAERPYDHTAD 299
L +NVLL A + DFG ++++ T S PL + APE I R + +D
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 195
Query: 300 LWSLGCIAYE-IHMGHPPFKTV 320
+WS G +E + G P+K +
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKM 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 185
LIG+G FG+V+ H VA+++I + +L + K+E + H N++ F+
Sbjct: 40 LIGKGRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 186 SHETLNEFVLITEF--AHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ + +IT S + + + L QI ++ + YLH+ +LH+DL
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDL 156
Query: 244 KPQNVLLNKDGVAMLCDFGF---ARSMAVGTH--MLTSIKGTPLYMAPELIAE------- 291
K +NV + +G ++ DFG + + G L G ++APE+I +
Sbjct: 157 KSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215
Query: 292 --RPYDHTADLWSLGCIAYEIHMGHPPFKT 319
P+ +D+++LG I YE+H PFKT
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKT 245
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 16 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA 75
LIG+G FG+V+ H VA+++I + +L + K+E + H N++ F+
Sbjct: 40 LIGKGRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 76 SHETLNEFVLIT 87
+ + +IT
Sbjct: 97 ACMSPPHLAIIT 108
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 120 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L H
Sbjct: 28 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 84
Query: 178 -PNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKL------------SETICVQIL 223
PNII + + E L E+A H +L + L + + L + T+ Q L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 224 ----SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+++ + YL + +HRDL +N+L+ ++ VA + DFG +R V ++ ++
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGR 202
Query: 280 TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLI-RLLKTQDVTF 336
P+ +MA E + Y +D+WS G + +EI +G P+ ++ L +L + +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 262
Query: 337 PSQVSETYKDLVKGLLEKDASQRLSWPELL 366
P + DL++ + +R S+ ++L
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 10 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLA- 66
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L
Sbjct: 28 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 84
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
HPNII + + E L E+A
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYA 108
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 39/232 (16%)
Query: 177 HPNIIKFIASHETLNEFVLIT-EFAHMSLSNLLEQRKKLSETICVQ-------ILSNLIS 228
HPN+I++ S ET + F+ I E +++L +L+E + E + +Q +L + S
Sbjct: 68 HPNVIRYYCS-ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 229 ALYYLHSNRVLHRDLKPQNVLLN---------KDGVA----MLCDFGFARSMAVGTHM-- 273
+ +LHS +++HRDLKPQN+L++ + G ++ DFG + + G
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 274 --LTSIKGTPLYMAPELIAE-------RPYDHTADLWSLGCIAYEI-HMGHPPF-----K 318
L + GT + APEL+ E R + D++S+GC+ Y I G PF +
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 319 TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPL 370
+I+ I L + DL+ +++ D +R + ++L HPL
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 25/247 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
A + + ++G G FGKV+K D VA+K + + G EL + E E+
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGELQ-FQTEVEMISMAV 93
Query: 177 HPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKK----LSETICVQILSNLISALY 231
H N+++ T E +L+ + A+ S+++ L +R + L +I L
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 232 YLHSN---RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV-GTHMLTSIKGTPLYMAPE 287
YLH + +++HRD+K N+LL+++ A++ DFG A+ M H+ +++GT ++APE
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDL 347
++ D++ G + E+ G F L RL DV D
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQRAF------DLARLANDDDVML--------LDW 259
Query: 348 VKGLLEK 354
VKGLL++
Sbjct: 260 VKGLLKE 266
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
A + + ++G G FGKV+K D VA+K + + G EL + E E+
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERXQGGEL-QFQTEVEMISMAV 93
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
H N+++ T E +L+ +
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPY 116
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH---L 175
+ +Q++ +G GS+G+VFK + + A+K R K+ + ++ E+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRA--RKLAEVGSHEKVG 114
Query: 176 AHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLH 234
HP ++ + E L TE SL E L E L + + AL +LH
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK-GTPLYMAPELIAERP 293
S ++H D+KP N+ L G L DFG + +GT ++ G P YMAPEL+ +
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLL--VELGTAGAGEVQEGDPRYMAPELL-QGS 231
Query: 294 YDHTADLWSLGCIAYEI 310
Y AD++SLG E+
Sbjct: 232 YGTAADVFSLGLTILEV 248
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH---L 65
+ +Q++ +G GS+G+VFK + + A+K R K+ + ++ E+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRA--RKLAEVGSHEKVG 114
Query: 66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPW 101
HP ++ + E L TE SL + E W
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAW 150
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 31/278 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 273
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNL 375
+ ++ + +QR S+ +L L ++DN+
Sbjct: 274 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 93
Query: 73 F 73
+
Sbjct: 94 Y 94
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA- 185
+GEG F V L ALK I + +E ++E ++ + HPNI++ +A
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDRE--EAQREADMHRLFNHPNILRLVAY 94
Query: 186 -------SHETLNEFVLITEFAHMSLSNLLEQRKK----LSETICVQILSNLISALYYLH 234
HE ++L+ F +L N +E+ K L+E + +L + L +H
Sbjct: 95 CLRERGAKHEA---WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV---GTHMLTSIKG------TPLYMA 285
+ HRDLKP N+LL +G +L D G + G+ +++ T Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 286 PELIAERPY---DHTADLWSLGCIAYEIHMGHPPFKTV 320
PEL + + + D D+WSLGC+ Y + G P+ V
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 127 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 77
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETIC---------------VQILSN 225
+F +++ E+ H L+ L ++ + + + S
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM------AVGTHMLTSIKG 279
+ + + YL +HRDL +N L+ + V + DFG +R + VG + I+
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 196
Query: 280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR-LLKTQDVTFP 337
+M PE I R + +D+WS G + +EI G P+ +S I + + +++ P
Sbjct: 197 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 253
Query: 338 SQVSETYKDLVKGLLEKDASQRLS 361
+++G +++ QR S
Sbjct: 254 RACPPEVYAIMRGCWQREPQQRHS 277
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 17 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 77
Query: 72 KFIASHETLNEFVLITEF 89
+F +++ E+
Sbjct: 78 RFFGVCTEGRPLLMVFEY 95
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 127 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 106
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETIC---------------VQILSN 225
+F +++ E+ H L+ L ++ + + + S
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM------AVGTHMLTSIKG 279
+ + + YL +HRDL +N L+ + V + DFG +R + VG + I+
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 225
Query: 280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR-LLKTQDVTFP 337
+M PE I R + +D+WS G + +EI G P+ +S I + + +++ P
Sbjct: 226 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 282
Query: 338 SQVSETYKDLVKGLLEKDASQRLS 361
+++G +++ QR S
Sbjct: 283 RACPPEVYAIMRGCWQREPQQRHS 306
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 17 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 106
Query: 72 KFIASHETLNEFVLITEF 89
+F +++ E+
Sbjct: 107 RFFGVCTEGRPLLMVFEY 124
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 127 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 83
Query: 182 KFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETIC---------------VQILSN 225
+F +++ E+ H L+ L ++ + + + S
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM------AVGTHMLTSIKG 279
+ + + YL +HRDL +N L+ + V + DFG +R + VG + I+
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR- 202
Query: 280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR-LLKTQDVTFP 337
+M PE I R + +D+WS G + +EI G P+ +S I + + +++ P
Sbjct: 203 ---WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP 259
Query: 338 SQVSETYKDLVKGLLEKDASQRLS 361
+++G +++ QR S
Sbjct: 260 RACPPEVYAIMRGCWQREPQQRHS 283
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 17 IGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
+GEG+FGKVF A +L K VA+K + ++ S ++ ++E E+ L H +I+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ--DFQREAELLTMLQHQHIV 83
Query: 72 KFIASHETLNEFVLITEF 89
+F +++ E+
Sbjct: 84 RFFGVCTEGRPLLMVFEY 101
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 73
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKT 331
+D+WS G + YE+ PP + + + HLI LLK
Sbjct: 194 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 245
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 73
Query: 73 F 73
+
Sbjct: 74 Y 74
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 29/232 (12%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 106
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI-CVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L++ K+ + I +Q S + + YL + R
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLY-MAPELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKT 331
+D+WS G + YE+ PP + + + HLI LLK
Sbjct: 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 106
Query: 73 F 73
+
Sbjct: 107 Y 107
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 31/236 (13%)
Query: 126 LIGEGSFGKVFKAIHLDLKK------TVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
++GEG FG V + +LK+ VA+K + S +E+ E K +HPN
Sbjct: 41 ILGEGEFGSVMEG---NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 180 IIKFIA-----SHETLNEFVLITEF-------AHMSLSNLLEQRKKLSETICVQILSNLI 227
+I+ + S + + + ++I F ++ S L K + ++ + ++
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 228 SALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS-IKGTPL-YMA 285
+ YL + LHRDL +N +L D + DFG ++ + G + I P+ ++A
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 286 PELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVS-------ILHLIRLLKTQD 333
E +A+R Y +D+W+ G +EI G P+ V +LH RL + +D
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPED 273
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 16 LIGEGSFGKVFKAIHLDLKK------TVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 69
++GEG FG V + +LK+ VA+K + S +E+ E K +HPN
Sbjct: 41 ILGEGEFGSVMEG---NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 70 IIKFIA 75
+I+ +
Sbjct: 98 VIRLLG 103
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
++I +GEG FGKV + + + VA+K + K G ++ LK+E EI ++L H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 82
Query: 178 PNIIKF--IASHETLNEFVLITEF-AHMSLSNLLEQRK-KLSETICVQILSNLISALYYL 233
NI+K+ I + + N LI EF SL L + K K++ ++ + + YL
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYM-APELIA 290
S + +HRDL +NVL+ + + DFG +++ T + +P++ APE +
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 291 ERPYDHTADLWSLGCIAYE---------------IHMGHPPFKTVSILHLIRLLK-TQDV 334
+ + +D+WS G +E + M P +++ L+ LK + +
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELL 366
P + L++ E S R S+ L+
Sbjct: 263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
++I +GEG FGKV + + + VA+K + K G ++ LK+E EI ++L H
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 82
Query: 68 PNIIKF--IASHETLNEFVLITEF 89
NI+K+ I + + N LI EF
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEF 106
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S ++ +E E+ L+HP +++
Sbjct: 15 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFI---EEAEVMMKLSHPKLVQLYGV 70
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+ EF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASVIHRDL 129
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
++I +GEG FGKV + + + VA+K + K G ++ LK+E EI ++L H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 70
Query: 178 PNIIKF--IASHETLNEFVLITEF-AHMSLSNLLEQRK-KLSETICVQILSNLISALYYL 233
NI+K+ I + + N LI EF SL L + K K++ ++ + + YL
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPLYM-APELIA 290
S + +HRDL +NVL+ + + DFG +++ T + +P++ APE +
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 291 ERPYDHTADLWSLGCIAYE---------------IHMGHPPFKTVSILHLIRLLK-TQDV 334
+ + +D+WS G +E + M P +++ L+ LK + +
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 250
Query: 335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELL 366
P + L++ E S R S+ L+
Sbjct: 251 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
++I +GEG FGKV + + + VA+K + K G ++ LK+E EI ++L H
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYH 70
Query: 68 PNIIKF--IASHETLNEFVLITEF 89
NI+K+ I + + N LI EF
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEF 94
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 105
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLIS----------- 228
+ + + ++ITE+ + L N L R+K IC + ++
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 229 ---------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+ +L S +HRDL +N+LL + +CDFG AR + ++ + +KG
Sbjct: 164 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKG 221
Query: 280 T---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKTQ- 332
P+ +MAPE I Y +D+WS G +E+ +G P+ + + +++K
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 281
Query: 333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
+ P D++K + D +R ++ +++
Sbjct: 282 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 105
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 106 VNLLGACTIGGPTLVITEY 124
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 51/287 (17%)
Query: 121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVXLLASLNHQYV 64
Query: 181 IKFIASHETLNEFVLI--------------------TEFAHMSLSNLLEQRKKLSETICV 220
+++ A+ FV T + + NL +QR +
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE-----YW 119
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA----RSMAV------- 269
++ ++ AL Y+HS ++HR+LKP N+ +++ + DFG A RS+ +
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 270 ---GTHMLTSIKGTPLYMAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFKT-VSILH 324
+ LTS GT Y+A E++ Y+ D +SLG I +E PF T ++
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVN 236
Query: 325 LIRLLKTQDVTFPSQVSETY----KDLVKGLLEKDASQRLSWPELLH 367
+++ L++ + FP + K +++ L++ D ++R LL+
Sbjct: 237 ILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLN 283
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 70
+++I ++G+G+FG+V KA + + A+K I + ++LS++ E + L H +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVXLLASLNHQYV 64
Query: 71 IKFIASHETLNEFV 84
+++ A+ FV
Sbjct: 65 VRYYAAWLERRNFV 78
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIA 185
+GEG FG V+K +++ K+ + + +EL QE ++ H N+++ +
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQRKKLSET------ICVQILSNLISALYYLHSNRVL 239
++ L+ + +M +LL++ L T + +I + + +LH N +
Sbjct: 98 FSSDGDDLCLV--YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMA--VGTHMLTSIKGTPLYMAPELIAERPYDHT 297
HRD+K N+LL++ A + DFG AR+ T M + I GT YMAPE +
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPK 214
Query: 298 ADLWSLGCIAYEIHMGHP 315
+D++S G + EI G P
Sbjct: 215 SDIYSFGVVLLEIITGLP 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 107
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLIS----------- 228
+ + + ++ITE+ + L N L R+K IC + ++
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 229 ---------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+ +L S +HRDL +N+LL + +CDFG AR + ++ + +KG
Sbjct: 166 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKG 223
Query: 280 T---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKTQ- 332
P+ +MAPE I Y +D+WS G +E+ +G P+ + + +++K
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 283
Query: 333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
+ P D++K + D +R ++ +++
Sbjct: 284 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 107
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 108 VNLLGACTIGGPTLVITEY 126
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 89
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLIS----------- 228
+ + + ++ITE+ + L N L R+K IC + ++
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 229 ---------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+ +L S +HRDL +N+LL + +CDFG AR + ++ + +KG
Sbjct: 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKG 205
Query: 280 T---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKTQ- 332
P+ +MAPE I Y +D+WS G +E+ +G P+ + + +++K
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 265
Query: 333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
+ P D++K + D +R ++ +++
Sbjct: 266 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 89
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 90 VNLLGACTIGGPTLVITEY 108
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 28/270 (10%)
Query: 120 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L H
Sbjct: 25 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 81
Query: 178 -PNIIKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKL------------SETICVQIL 223
PNII + + E L E+A H +L + L + + L + T+ Q L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 224 ----SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+++ + YL + +HR+L +N+L+ ++ VA + DFG +R V ++ ++
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV--YVKKTMGR 199
Query: 280 TPL-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLI-RLLKTQDVTF 336
P+ +MA E + Y +D+WS G + +EI +G P+ ++ L +L + +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK 259
Query: 337 PSQVSETYKDLVKGLLEKDASQRLSWPELL 366
P + DL++ + +R S+ ++L
Sbjct: 260 PLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 10 KYQKICLIGEGSFGKVFKA-IHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHLA- 66
K+Q + IGEG+FG+V KA I D L+ A+K + K S + E E+ L
Sbjct: 25 KFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGH 81
Query: 67 HPNIIKFIASHETLNEFVLITEFA 90
HPNII + + E L E+A
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYA 105
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S ++ +E E+ L+HP +++
Sbjct: 13 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFI---EEAEVMMKLSHPKLVQLYGV 68
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+ EF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDL 127
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 230
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S ++ +E E+ L+HP +++
Sbjct: 15 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFI---EEAEVMMKLSHPKLVQLYGV 70
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+ EF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDL 129
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 188 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+KI +GEG FGKV + + + VA+K + K G + S ++E EI + L H
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 69
Query: 178 PNIIKFIASHETLNE--FVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+I+K+ E E L+ E+ + SL + L R + + + + YLH
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLH 128
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--THMLTSIKGTPLYM-APELIAE 291
+ +HR L +NVLL+ D + + DFG A+++ G + + +P++ APE + E
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 292 RPYDHTADLWSLGCIAYEI 310
+ + +D+WS G YE+
Sbjct: 189 CKFYYASDVWSFGVTLYEL 207
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+KI +GEG FGKV + + + VA+K + K G + S ++E EI + L H
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 69
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHC 106
+I+K+ E E + ++ L L + + HC
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD-YLPRHC 107
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S ++ +E E+ L+HP +++
Sbjct: 18 IGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFI---EEAEVMMKLSHPKLVQLYGV 73
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+ EF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDL 132
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 235
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 127 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 183 F--IASHETLNEFVLITEF-AHMSLSNLLE-QRKKLSETICVQILSNLISALYYLHSNRV 238
+ + LI E+ + SL + L+ +++ +Q S + + YL + R
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYM-APELIAERPYD 295
+HRDL +N+L+ + + DFG + + + +P++ APE + E +
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 296 HTADLWSLGCIAYEIHM-----GHPPFKTVS-----------ILHLIRLLKTQD-VTFPS 338
+D+WS G + YE+ PP + + + HLI LLK + P
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPD 258
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPEL-LHHPLVKDNLSS 377
+ ++ + +QR S+ +L L ++DN++
Sbjct: 259 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 17 IGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+G+G+FG V + + + + VA+K + S + + L ++E EI K L H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVK 78
Query: 73 F 73
+
Sbjct: 79 Y 79
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 122 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+KI +GEG FGKV + + + VA+K + K G + S ++E EI + L H
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 70
Query: 178 PNIIKFIASHETLNE--FVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH 234
+I+K+ E E L+ E+ + SL + L R + + + + YLH
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLH 129
Query: 235 SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--THMLTSIKGTPLYM-APELIAE 291
+ +HR L +NVLL+ D + + DFG A+++ G + + +P++ APE + E
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 292 RPYDHTADLWSLGCIAYEI 310
+ + +D+WS G YE+
Sbjct: 190 CKFYYASDVWSFGVTLYEL 208
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 12 QKICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+KI +GEG FGKV + + + VA+K + K G + S ++E EI + L H
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQLRSGWQREIEILRTLYH 70
Query: 68 PNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHC 106
+I+K+ E E + ++ L L + + HC
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD-YLPRHC 108
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLIS----------- 228
+ + + ++ITE+ + L N L R+K IC + ++
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 229 ---------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+ +L S +HRDL +N+LL + +CDFG AR + ++ + +KG
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKG 228
Query: 280 T---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKTQ- 332
P+ +MAPE I Y +D+WS G +E+ +G P+ + + +++K
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
+ P D++K + D +R ++ +++
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTIGGPTLVITEY 131
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 95 SKLGEPWF----HNHCQPVKMEKSNGALEKYQKI---CLIGEGSFGKV-FKAIHLDLKKT 146
KL EP F H + +P + +S + +I +IG G G+V + + + ++
Sbjct: 18 GKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRD 77
Query: 147 VALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA-HMSL 204
V + I + K+G + ++ E I HPNII+ +++TE+ + SL
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 205 SNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF 263
L + + V +L + + + YL +HRDL +NVL++ + V + DFG
Sbjct: 138 DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 264 ARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPF 317
+R + + G + + APE IA R + +D+WS G + +E+ G P+
Sbjct: 198 SRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 52/238 (21%)
Query: 119 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
E+Y+ + +GEG+FGKV + + H K VALKII G+ +E + L EI
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL----EI------ 76
Query: 178 PNIIKFIASHETLNEF--VLITEF----AHMSLS------NLLEQRKKLSETI-----CV 220
N++K I + N+F VL++++ HM ++ N E K+ +
Sbjct: 77 -NVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR 135
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLN-------------------KDGVAMLCDF 261
+ L AL +LH N++ H DLKP+N+L K+ + DF
Sbjct: 136 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 195
Query: 262 GFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
G S T+I T Y PE+I E + D+WS+GCI +E + G F+T
Sbjct: 196 G---SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGR 47
E+Y+ + +GEG+FGKV + + H K VALKII G+
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK 67
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 52/238 (21%)
Query: 119 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
E+Y+ + +GEG+FGKV + + H K VALKII G+ +E + L EI
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL----EI------ 99
Query: 178 PNIIKFIASHETLNEF--VLITEF----AHMSLS------NLLEQRKKLSETI-----CV 220
N++K I + N+F VL++++ HM ++ N E K+ +
Sbjct: 100 -NVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR 158
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLN-------------------KDGVAMLCDF 261
+ L AL +LH N++ H DLKP+N+L K+ + DF
Sbjct: 159 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 218
Query: 262 GFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
G S T+I T Y PE+I E + D+WS+GCI +E + G F+T
Sbjct: 219 G---SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGR 47
E+Y+ + +GEG+FGKV + + H K VALKII G+
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK 90
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Query: 117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 176
A + + ++G G FGKV+K D VA+K + + G EL + E E+
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQ-FQTEVEMISMAV 85
Query: 177 HPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKK----LSETICVQILSNLISALY 231
H N+++ T E +L+ + A+ S+++ L +R + L +I L
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 232 YLHSN---RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV-GTHMLTSIKGTPLYMAPE 287
YLH + +++HRD+K N+LL+++ A++ DFG A+ M H+ +++G ++APE
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 288 LIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDL 347
++ D++ G + E+ G F L RL DV D
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAF------DLARLANDDDVML--------LDW 251
Query: 348 VKGLLEK 354
VKGLL++
Sbjct: 252 VKGLLKE 258
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA 66
A + + ++G G FGKV+K D VA+K + + G EL + E E+
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGEL-QFQTEVEMISMAV 85
Query: 67 HPNIIKFIASHETLNEFVLITEF 89
H N+++ T E +L+ +
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPY 108
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 29/255 (11%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 181
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 182 KFIA----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
K + EFV + H LL++ + ++ ++++ ++ + Y+ +
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYH----RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --VLHRDLKPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++HRDL+ N+ L N A + DFG ++ H ++ + G +MAPE I
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ---SVHSVSGLLGNFQWMAPETIG 199
Query: 291 --ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI--LHLIRLLKTQDV--TFPSQVSETY 344
E Y AD +S I Y I G PF S + I +++ + + T P
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 345 KDLVKGLLEKDASQR 359
+++++ D +R
Sbjct: 260 RNVIELCWSGDPKKR 274
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 71
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KFIA----SHETLNEFVLITEFAHMSLSK 96
K + EFV + H L K
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDK 115
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIA 185
+GEG FG V+K +++ K+ + + +EL QE ++ H N+++ +
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQRKKLSET------ICVQILSNLISALYYLHSNRVL 239
++ L+ + +M +LL++ L T + +I + + +LH N +
Sbjct: 98 FSSDGDDLCLV--YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMA--VGTHMLTSIKGTPLYMAPELIAERPYDHT 297
HRD+K N+LL++ A + DFG AR+ T M I GT YMAPE +
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPK 214
Query: 298 ADLWSLGCIAYEIHMGHP 315
+D++S G + EI G P
Sbjct: 215 SDIYSFGVVLLEIITGLP 232
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 52/238 (21%)
Query: 119 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
E+Y+ + +GEG+FGKV + + H K VALKII G+ +E + L EI
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL----EI------ 67
Query: 178 PNIIKFIASHETLNEF--VLITEF----AHMSLS------NLLEQRKK-----LSETICV 220
N++K I + N+F VL++++ HM ++ N E K+
Sbjct: 68 -NVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVR 126
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVLLN-------------------KDGVAMLCDF 261
+ L AL +LH N++ H DLKP+N+L K+ + DF
Sbjct: 127 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186
Query: 262 GFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
G S T+I T Y PE+I E + D+WS+GCI +E + G F+T
Sbjct: 187 G---SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 9 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGR 47
E+Y+ + +GEG+FGKV + + H K VALKII G+
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK 58
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 11/218 (5%)
Query: 122 QKICLIGEGSFGKVFKAIHL----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+K+ ++G G+FG V+K I + ++K VA+K++ + S K + E + +
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL-RENTSPKANKEILDEAYVMAGVGS 78
Query: 178 PNIIKFIASHETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHS 235
P + + + T + L+T+ L ++ E R +L + + + YL
Sbjct: 79 PYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED 137
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIAERP 293
R++HRDL +NVL+ + DFG AR + + + G P+ +MA E I R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 294 YDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
+ H +D+WS G +E+ G P+ + + LL+
Sbjct: 198 FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 12 QKICLIGEGSFGKVFKAIHL----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+K+ ++G G+FG V+K I + ++K VA+K++ + S K + E + +
Sbjct: 20 RKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL-RENTSPKANKEILDEAYVMAGVGS 78
Query: 68 PNIIKFIA 75
P + + +
Sbjct: 79 PYVSRLLG 86
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 15/238 (6%)
Query: 95 SKLGEPWF----HNHCQPVKMEKSNGALEKYQKI---CLIGEGSFGKV-FKAIHLDLKKT 146
KL EP F H + +P + +S + +I +IG G G+V + + + ++
Sbjct: 18 GKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRD 77
Query: 147 VALKIIS-KSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA-HMSL 204
V + I + K+G + ++ E I HPNII+ +++TE+ + SL
Sbjct: 78 VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 205 SNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF 263
L + + V +L + + + YL +HRDL +NVL++ + V + DFG
Sbjct: 138 DTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 264 ARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPF 317
+R + + G + + APE IA R + +D+WS G + +E+ G P+
Sbjct: 198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 75
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + R ++ E+++ L+KD+L
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDL 290
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 122 QKICLIGEGSFGKVFKAIHLD----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+++ ++G G+FG V+K I + +K VA+KI++++ K E I + H
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDH 76
Query: 178 PNIIKFIASHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
P++++ + L+ + L+T+ M LLE + + I Q+L N + + Y
Sbjct: 77 PHLVRLLGV--CLSPTIQLVTQL--MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG AR + + G P+ +MA E I
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
R + H +D+WS G +E+ G P+ + + LL+
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 12 QKICLIGEGSFGKVFKAIHLD----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+++ ++G G+FG V+K I + +K VA+KI++++ K E I + H
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDH 76
Query: 68 PNIIKFIA 75
P++++ +
Sbjct: 77 PHLVRLLG 84
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLL-----------------------EQRKKLSE 216
+ + + ++ITE+ + L N L E + L
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 217 TICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS 276
+ S + + +L S +HRD+ +NVLL VA + DFG AR + ++ +
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI-- 215
Query: 277 IKGT---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI 322
+KG P+ +MAPE I + Y +D+WS G + +EI +G P+ + +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 266
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A L K VA+K++ KS E +L E +I HL H NI
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 98 VNLLGACTHGGPVLVITEY 116
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 39/275 (14%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 180
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 181 IKFIASHETLNEFVLITEFA-HMSLSNLLEQRKKLSETICVQILSNLIS----------- 228
+ + + ++ITE+ + L N L R+K IC + ++
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 229 ---------ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG 279
+ +L S +HRDL +N+LL + +CDFG AR + ++ + +KG
Sbjct: 171 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV--VKG 228
Query: 280 T---PL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSI-LHLIRLLKTQ- 332
P+ +MAPE I Y +D+WS G +E+ +G P+ + + +++K
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGF 288
Query: 333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH 367
+ P D++K + D +R ++ +++
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNI 70
+G G+FGKV +A I D TVA+K++ S E +L E ++ +L H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHMNI 112
Query: 71 IKFIASHETLNEFVLITEF 89
+ + + ++ITE+
Sbjct: 113 VNLLGACTIGGPTLVITEY 131
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 74
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + + KG P
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 254
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + R ++ E+++ L+KD+L
Sbjct: 255 NCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDL 289
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
IG G FG V L+ K VA+K I + S + +E E+ L+HP +++
Sbjct: 35 IGSGQFGLVHLGYWLN-KDKVAIKTIKEGSMSEDDFI---EEAEVMMKLSHPKLVQLYGV 90
Query: 187 HETLNEFVLITEFA-HMSLSNLLEQRKKL--SETICVQILSNLISALYYLHSNRVLHRDL 243
L+ EF H LS+ L ++ L +ET+ L ++ + YL V+HRDL
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDL 149
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL---YMAPELIAERPYDHTADL 300
+N L+ ++ V + DFG R V TS GT + +PE+ + Y +D+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 301 WSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSETY 344
WS G + +E+ G P++ S ++ + T + +++ T+
Sbjct: 208 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 252
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 75
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + + R ++ E+++ L+KD+L
Sbjct: 256 NCPERVTDLMRMCWQFNPNMRPTFLEIVN--LLKDDL 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 131/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 75
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + R ++ E+++ L+KD+L
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDL 290
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 122 QKICLIGEGSFGKVFKAIHLD----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
+++ ++G G+FG V+K I + +K VA+KI++++ K E I + H
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDH 99
Query: 178 PNIIKFIASHETLNEFV-LITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
P++++ + L+ + L+T+ M LLE + + I Q+L N + + Y
Sbjct: 100 PHLVRLLGV--CLSPTIQLVTQL--MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG AR + + G P+ +MA E I
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
R + H +D+WS G +E+ G P+ + + LL+
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 12 QKICLIGEGSFGKVFKAIHLD----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 67
+++ ++G G+FG V+K I + +K VA+KI++++ K E I + H
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVEFMDEALIMASMDH 99
Query: 68 PNIIKFIA 75
P++++ +
Sbjct: 100 PHLVRLLG 107
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V + ++ KK VA+K++ K G + + +E +I L +P I++ I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 185 ASHETLNEFVLITEFAHMSLSN--LLEQRKKLSETICVQILSNLISALYYLHSNRVLHRD 242
+ +L+ E A + L+ +R+++ + ++L + + YL +HR+
Sbjct: 403 GVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT--SIKGTPL-YMAPELIAERPYDHTAD 299
L +NVLL A + DFG ++++ T S PL + APE I R + +D
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSD 521
Query: 300 LWSLGCIAYE-IHMGHPPFKTV 320
+WS G +E + G P+K +
Sbjct: 522 VWSYGVTMWEALSYGQKPYKKM 543
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 130/277 (46%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 72
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 73 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 132
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + KG P
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 252
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + R ++ E+++ L+KD+L
Sbjct: 253 NCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 29/255 (11%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 181
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 182 KFIA----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
K + EFV + H LL++ + ++ ++++ ++ + Y+ +
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYH----RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --VLHRDLKPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++HRDL+ N+ L N A + DFG ++ H ++ + G +MAPE I
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ---SVHSVSGLLGNFQWMAPETIG 199
Query: 291 --ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI--LHLIRLLKTQDV--TFPSQVSETY 344
E Y AD +S I Y I G PF S + I +++ + + T P
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 345 KDLVKGLLEKDASQR 359
+++++ D +R
Sbjct: 260 RNVIELCWSGDPKKR 274
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 71
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KFIA----SHETLNEFVLITEFAHMSLSK 96
K + EFV + H L K
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDK 115
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 130/277 (46%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 75
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HRDL +N ++ D + DFG R + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + R ++ E+++ L+KD+L
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDL 290
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 94
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 274 HPKAEMRPSFSELV 287
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 94
Query: 73 FIA 75
+
Sbjct: 95 LLG 97
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 218 ICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM---------- 267
+C+ I + A+ +LHS ++HRDLKP N+ D V + DFG +M
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 268 ----AVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYE-IHMGHPPFKTVSI 322
A TH GT LYM+PE I Y H D++SLG I +E ++ + V I
Sbjct: 225 TPMPAYATH--XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI 282
Query: 323 LHLIRLLKTQDVTFPSQVSETYKD---LVKGLLEKDASQR 359
+ +R LK FP ++ Y +V+ +L ++R
Sbjct: 283 ITDVRNLK-----FPLLFTQKYPQEHMMVQDMLSPSPTER 317
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 222 ILSNLISALYYLHSNR-VLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT 280
I+ +++++ Y+H+ + + HRD+KP N+L++K+G L DFG + M + +GT
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKKIKGSRGT 213
Query: 281 PLYMAPELIA-ERPYDHT-ADLWSLGCIAYEIHMGHPPFK-TVSILHLIRLLKTQDVTFP 337
+M PE + E Y+ D+WSLG Y + PF +S++ L ++T+++ +P
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP 273
Query: 338 --------------SQVSETYK-----DLVKGLLEKDASQRLSWPELLHHPLVKD 373
S S + D +K L K+ ++R++ + L H + D
Sbjct: 274 LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG V K + VA+K+I + S E QE + L+HP ++KF
Sbjct: 16 LGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFF---QEAQTMMKLSHPKLVKFYGV 71
Query: 187 HETLNEFVLITEFAHMS--LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
++TE+ L+ L K L + +++ ++ + +L S++ +HRDL
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLA 131
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
+N L+++D + DFG R + ++ + P+ + APE+ Y +D+W+
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 304 GCIAYEIH-MGHPPF 317
G + +E+ +G P+
Sbjct: 192 GILMWEVFSLGKMPY 206
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 76
+G G FG V K + VA+K+I + S E QE + L+HP ++KF
Sbjct: 16 LGSGQFG-VVKLGKWKGQYDVAVKMIKEGSMSEDEFF---QEAQTMMKLSHPKLVKFYGV 71
Query: 77 HETLNEFVLITEF 89
++TE+
Sbjct: 72 CSKEYPIYIVTEY 84
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQL--MPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 90
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 149
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 210 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 269
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 270 HPKAEMRPSFSELV 283
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 90
Query: 73 FIA 75
+
Sbjct: 91 LLG 93
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 275 HPKAEMRPSFSELV 288
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 73 FIA 75
+
Sbjct: 96 LLG 98
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 275 HPKAEMRPSFSELV 288
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 73 FIA 75
+
Sbjct: 96 LLG 98
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 93
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 152
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 272
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 273 HPKAEMRPSFSELV 286
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 93
Query: 73 FIA 75
+
Sbjct: 94 LLG 96
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 135 VFKAIHLDLKKTVALKIISKSGRSGKELSSLKQ-ECEIQKHLAHPNIIKFIASHETLNEF 193
V++A ++ VALK+ S++ S + Q E L P+++ E +
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK 252
+ + + L+ L ++ L+ V I+ + SAL H+ HRD+KP+N+L++
Sbjct: 110 YVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169
Query: 253 DGVAMLCDFGFARSMAVGTHMLTSIK---GTPLYMAPELIAERPYDHTADLWSLGCIAYE 309
D A L DFG A A LT + GT Y APE +E + AD+++L C+ YE
Sbjct: 170 DDFAYLVDFGIA--SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYE 227
Query: 310 IHMGHPPFK 318
G PP++
Sbjct: 228 CLTGSPPYQ 236
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 52/238 (21%)
Query: 119 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH 177
E+Y+ + +GEG+FG+V + + H VALKII K+ KE + L EI
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKII-KNVEKYKEAARL----EI------ 81
Query: 178 PNIIKFIASHETLNEFVLITEF------AHMSLS---------NLLEQRKKLSETI--CV 220
N+++ I + N+ + + F HM +S + L+ L I
Sbjct: 82 -NVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVR 140
Query: 221 QILSNLISALYYLHSNRVLHRDLKPQNVL-LNKD------------------GVAMLCDF 261
+ L A+ +LH N++ H DLKP+N+L +N D + DF
Sbjct: 141 HMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDF 200
Query: 262 GFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
G S ++I T Y APE+I E + D+WS+GCI +E ++G F+T
Sbjct: 201 G---SATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 9 EKYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLK 56
E+Y+ + +GEG+FG+V + + H VALKII K+ KE + L+
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKII-KNVEKYKEAARLE 80
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 94
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 214 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 274 HPKAEMRPSFSELV 287
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 94
Query: 73 FIA 75
+
Sbjct: 95 LLG 97
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 92
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 151
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 272 HPKAEMRPSFSELV 285
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 92
Query: 73 FIA 75
+
Sbjct: 93 LLG 95
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 87
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 146
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 207 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 266
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 267 HPKAEMRPSFSELV 280
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 87
Query: 73 FIA 75
+
Sbjct: 88 LLG 90
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 75
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HR+L +N ++ D + DFG R + + KG P
Sbjct: 136 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + + R ++ E+++ L+KD+L
Sbjct: 256 NCPERVTDLMRMCWQFNPNMRPTFLEIVN--LLKDDL 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 132/277 (47%), Gaps = 26/277 (9%)
Query: 122 QKICLI---GEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQK 173
+KI L+ G+GSFG V++ D+ K VA+K +++S S +E E + K
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMK 76
Query: 174 HLAHPNIIKFIASHETLNEFVLITEF-AHMSLSNLLEQRKKLSETI----------CVQI 222
++++ + +++ E AH L + L + +E +Q+
Sbjct: 77 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 136
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TP 281
+ + + YL++ + +HR+L +N ++ D + DFG R + + KG P
Sbjct: 137 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEI-HMGHPPFKTVSILHLIRLLKTQD-VTFPS 338
+ +MAPE + + + ++D+WS G + +EI + P++ +S +++ + + P
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 256
Query: 339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL 375
E DL++ + + + R ++ E+++ L+KD+L
Sbjct: 257 NCPERVTDLMRMCWQFNPNMRPTFLEIVN--LLKDDL 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 114
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 234 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 293
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 294 HPKAEMRPSFSELV 307
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 114
Query: 73 FIA 75
+
Sbjct: 115 LLG 117
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 73 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 101 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 249
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 113
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + YL S +
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSM----AVGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 233 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 292
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 293 HPKAEMRPSFSELV 306
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 113
Query: 73 FIA 75
+
Sbjct: 114 LLG 116
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 70 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIA 185
+GEG FG V+K +++ K+ + + +EL QE ++ H N+++ +
Sbjct: 33 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 186 SHETLNEFVLITEFAHMSLSNLLEQRKKLSET------ICVQILSNLISALYYLHSNRVL 239
++ L+ + +M +LL++ L T + +I + + +LH N +
Sbjct: 92 FSSDGDDLCLV--YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHT 297
HRD+K N+LL++ A + DFG AR+ M I GT YMAPE +
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPK 208
Query: 298 ADLWSLGCIAYEIHMGHP 315
+D++S G + EI G P
Sbjct: 209 SDIYSFGVVLLEIITGLP 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 82 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 86 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 152/385 (39%), Gaps = 68/385 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 72 KFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGS 131
+ + C K G L + C
Sbjct: 95 NLLGA-----------------------------CT-----KPGGPLMVIVEFC-----K 115
Query: 132 FGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN 191
FG + + + V K R GK+ ++++ L + AS +
Sbjct: 116 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG-AIPVDLKRRLDSITSSQSSASSGFVE 174
Query: 192 EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN 251
E L + +L + L IC + + +L S + +HRDL +N+LL+
Sbjct: 175 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLS 232
Query: 252 KDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-YMAPELIAERPYDHTADLWSLGCIAYE 309
+ V +CDFG AR + + PL +MAPE I +R Y +D+WS G + +E
Sbjct: 233 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 292
Query: 310 IH-MGHPPFKTVSI-------LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
I +G P+ V I L ++ D T P ++ +T D G + SQR +
Sbjct: 293 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-EMYQTMLDCWHG----EPSQRPT 347
Query: 362 WPELLHHPLVKDNLSSEIESQNNQD 386
+ EL+ H L + +++ QD
Sbjct: 348 FSELVEH------LGNLLQANAQQD 366
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 62/367 (16%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 72 KFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGS 131
+ + C K G L + C
Sbjct: 88 NLLGA-----------------------------CT-----KPGGPLMVIVEFC-----K 108
Query: 132 FGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN 191
FG + + + V K R GK+ ++++ L + AS +
Sbjct: 109 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG-AIPVDLKRRLDSITSSQSSASSGFVE 167
Query: 192 EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN 251
E L + +L + L IC + + +L S + +HRDL +N+LL+
Sbjct: 168 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLS 225
Query: 252 KDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-YMAPELIAERPYDHTADLWSLGCIAYE 309
+ V +CDFG AR + + PL +MAPE I +R Y +D+WS G + +E
Sbjct: 226 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 285
Query: 310 IH-MGHPPFKTVSI-------LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
I +G P+ V I L ++ D T P ++ +T D G + SQR +
Sbjct: 286 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-EMYQTMLDCWHG----EPSQRPT 340
Query: 362 WPELLHH 368
+ EL+ H
Sbjct: 341 FSELVEH 347
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 152/385 (39%), Gaps = 68/385 (17%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 72 KFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGS 131
+ + C K G L + C
Sbjct: 97 NLLGA-----------------------------CT-----KPGGPLMVIVEFC-----K 117
Query: 132 FGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN 191
FG + + + V K R GK+ ++++ L + AS +
Sbjct: 118 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG-AIPVDLKRRLDSITSSQSSASSGFVE 176
Query: 192 EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN 251
E L + +L + L IC + + +L S + +HRDL +N+LL+
Sbjct: 177 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLS 234
Query: 252 KDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-YMAPELIAERPYDHTADLWSLGCIAYE 309
+ V +CDFG AR + + PL +MAPE I +R Y +D+WS G + +E
Sbjct: 235 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 294
Query: 310 IH-MGHPPFKTVSI-------LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
I +G P+ V I L ++ D T P ++ +T D G + SQR +
Sbjct: 295 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-EMYQTMLDCWHG----EPSQRPT 349
Query: 362 WPELLHHPLVKDNLSSEIESQNNQD 386
+ EL+ H L + +++ QD
Sbjct: 350 FSELVEH------LGNLLQANAQQD 368
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 145/367 (39%), Gaps = 62/367 (16%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHP-NII 71
+G G+FG+V +A + KT + ++ K G + E +L E +I H+ H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 72 KFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGS 131
+ + C K G L + C
Sbjct: 90 NLLGA-----------------------------CT-----KPGGPLMVIVEFC-----K 110
Query: 132 FGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN 191
FG + + + V K R GK+ ++++ L + AS +
Sbjct: 111 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVG-AIPVDLKRRLDSITSSQSSASSGFVE 169
Query: 192 EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN 251
E L + +L + L IC + + +L S + +HRDL +N+LL+
Sbjct: 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSF--QVAKGMEFLASRKCIHRDLAARNILLS 227
Query: 252 KDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-YMAPELIAERPYDHTADLWSLGCIAYE 309
+ V +CDFG AR + + PL +MAPE I +R Y +D+WS G + +E
Sbjct: 228 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 287
Query: 310 IH-MGHPPFKTVSI-------LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
I +G P+ V I L ++ D T P ++ +T D G + SQR +
Sbjct: 288 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-EMYQTMLDCWHG----EPSQRPT 342
Query: 362 WPELLHH 368
+ EL+ H
Sbjct: 343 FSELVEH 349
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 29/255 (11%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 181
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 182 KFIA----SHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNR 237
K + EFV + H LL++ + ++ ++++ ++ + Y+ +
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYH----RLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --VLHRDLKPQNVLL-----NKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIA 290
++HRDL+ N+ L N A + DF ++ H ++ + G +MAPE I
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ---SVHSVSGLLGNFQWMAPETIG 199
Query: 291 --ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI--LHLIRLLKTQDV--TFPSQVSETY 344
E Y AD +S I Y I G PF S + I +++ + + T P
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 345 KDLVKGLLEKDASQR 359
+++++ D +R
Sbjct: 260 RNVIELCWSGDPKKR 274
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNII 71
IG+G FG V K + K VA+K + G ++ ++E I +L HPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 72 KFIA----SHETLNEFVLITEFAHMSLSK 96
K + EFV + H L K
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDK 115
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 33/209 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQK--HLAHPNIIKFI 184
+G+G +G+V++ + VA+KI S ++ S +E E+ L H NI+ FI
Sbjct: 16 VGKGRYGEVWRGSWQG--ENVAVKIFS-----SRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 185 ASHETL----NEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH----- 234
AS T + LIT + M SL + L Q L C++I+ ++ S L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 235 ---SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML----TSIKGTPLYMAPE 287
+ HRDLK +N+L+ K+G + D G A + T+ L GT YMAPE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 288 LIAERP----YD--HTADLWSLGCIAYEI 310
++ E +D D+W+ G + +E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 33/209 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFI 184
+G+G +G+V++ + VA+KI S ++ S +E E+ L H NI+ FI
Sbjct: 45 VGKGRYGEVWRGSWQ--GENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFI 97
Query: 185 ASHETL----NEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH----- 234
AS T + LIT + M SL + L Q L C++I+ ++ S L +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 235 ---SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML----TSIKGTPLYMAPE 287
+ HRDLK +N+L+ K+G + D G A + T+ L GT YMAPE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 288 LIAERP----YD--HTADLWSLGCIAYEI 310
++ E +D D+W+ G + +E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 33/209 (15%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFI 184
+G+G +G+V++ + VA+KI S ++ S +E E+ L H NI+ FI
Sbjct: 16 VGKGRYGEVWRGSWQG--ENVAVKIFS-----SRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 185 ASHETL----NEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLH----- 234
AS T + LIT + M SL + L Q L C++I+ ++ S L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 235 ---SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML----TSIKGTPLYMAPE 287
+ HRDLK +N+L+ K+G + D G A + T+ L GT YMAPE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 288 LIAERP----YD--HTADLWSLGCIAYEI 310
++ E +D D+W+ G + +E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 44/273 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKI---ISKSGRSGKELSSLKQECEIQKHLAHPNIIKF 183
+G+G+FG+V H+D KK A+K+ I K RS K + + ++ + + NI+K+
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN-NIVKY 101
Query: 184 IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI------CVQILSNLISALYYLHSNR 237
+ LI E SL ++ + I C++IL AL YL
Sbjct: 102 HGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK----ALNYLRKMS 157
Query: 238 VLHRDLKPQNVLLNK--------------DGVAM-----------LCDFGFARSMAVGTH 272
+ H DLKP+N+LL+ DG + L DFG A +
Sbjct: 158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA---TFKSD 214
Query: 273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ 332
SI T Y APE+I +D ++D+WS GC+ E++ G F+T + + ++++
Sbjct: 215 YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESI 274
Query: 333 DVTFP-SQVSETYKDLVKGLLEKDASQRLSWPE 364
P + + E K + KD +L+WPE
Sbjct: 275 IQPIPKNMLYEATKTNGSKYVNKD-ELKLAWPE 306
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 17 IGEGSFGKVFKAIHLDLKKTVALKI---ISKSGRSGK 50
+G+G+FG+V H+D KK A+K+ I K RS K
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAK 79
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 73 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 131
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 132 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 191
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 192 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 251
Query: 359 R 359
R
Sbjct: 252 R 252
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 109 VKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQ 167
V++++ + ++ + +IG G+F +V + A+KI++K + E+S ++
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 168 ECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQI----L 223
E ++ + I + + + N L+ E+ +LL K E I ++ L
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYLYLVMEY--YVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 224 SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTPL 282
+ ++ A+ +H +HRD+KP N+LL++ G L DFG + A GT GTP
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPD 228
Query: 283 YMAPELI-------AERPYDHTADLWSLGCIAYEIHMGHPPF 317
Y++PE++ Y D W+LG AYE+ G PF
Sbjct: 229 YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 77 NPHVCRLLGICLT-STVQLIMQL--MPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + I K+ + L L E + + L +P I++ I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 75 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 133
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 253
Query: 359 R 359
R
Sbjct: 254 R 254
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 198 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 257
Query: 359 R 359
R
Sbjct: 258 R 258
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 85 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 143
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 144 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 203
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 204 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 263
Query: 359 R 359
R
Sbjct: 264 R 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + I K+ + L L E + + L +P I++ I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 79 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 137
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 138 AARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDV 197
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 198 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 257
Query: 359 R 359
R
Sbjct: 258 R 258
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + I K+ + L L E + + L +P I++ I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 95 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 273
Query: 359 R 359
R
Sbjct: 274 R 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH-LDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + I K+ + L L E + + L +P I++ I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 95 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 153
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 154 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 213
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 214 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 273
Query: 359 R 359
R
Sbjct: 274 R 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 23/237 (9%)
Query: 112 EKSNGALEK------YQKICLIGEGSFGKVFKAIHL----DLKKTVALKII-SKSGRSGK 160
EK+N L + +K+ ++G G FG V K + + +K V +K+I KSGR +
Sbjct: 18 EKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--Q 75
Query: 161 ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICV 220
++ L H +I++ + + L+T++ + L +LL+ ++ +
Sbjct: 76 SFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQLVTQY--LPLGSLLDHVRQHRGALGP 132
Query: 221 QILSN----LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-HMLT 275
Q+L N + +YYL + ++HR+L +NVLL + DFG A + +L
Sbjct: 133 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Query: 276 SIKGTPL-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
S TP+ +MA E I Y H +D+WS G +E+ G P+ + + + LL+
Sbjct: 193 SEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 96
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 275
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 276 HPKAEMRPSFSELV 289
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 96
Query: 73 FIA 75
+
Sbjct: 97 LLG 99
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 275 HPKAEMRPSFSELV 288
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 73 FIA 75
+
Sbjct: 96 LLG 98
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 93
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 213 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 272
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 273 HPKAEMRPSFSELV 286
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 93
Query: 73 FIA 75
+
Sbjct: 94 LLG 96
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 96
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 215
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 216 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 275
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 276 HPKAEMRPSFSELV 289
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 96
Query: 73 FIA 75
+
Sbjct: 97 LLG 99
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 93 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 151
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 152 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 211
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 212 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 271
Query: 359 R 359
R
Sbjct: 272 R 272
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 100
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 219
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 220 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 279
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 280 HPKAEMRPSFSELV 293
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 100
Query: 73 FIA 75
+
Sbjct: 101 LLG 103
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIIS---KSGRSGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + + S K + E + +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 110 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 258
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 215 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 275 HPKAEMRPSFSELV 288
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 72
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 95
Query: 73 FIA 75
+
Sbjct: 96 LLG 98
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 126 LIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK 182
+IG G FG V+ LD K A+K +++ G E+S E I K +HPN++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLS 154
Query: 183 F--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRV 238
I + V++ H L N + + T+ + + + +L S +
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMA----VGTHMLTSIKGTPLYMAPELIAERPY 294
+HRDL +N +L++ + DFG AR M H T K +MA E + + +
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 273
Query: 295 DHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQDVTFPSQVSETYKDLVKGLL 352
+D+WS G + +E+ G PP+ V+ + + LL+ + + P + +++
Sbjct: 274 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 333
Query: 353 EKDASQRLSWPELL 366
A R S+ EL+
Sbjct: 334 HPKAEMRPSFSELV 347
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 80 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 77 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 79 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 45/222 (20%)
Query: 127 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
IGEG+FG+VF+A + + VA+K++ + + + + ++E + +PNI+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ-ADFQREAALMAEFDNPNIV 113
Query: 182 KFIA---------------SHETLNEFV------LITEFAHMSLSNLLEQRKKLS----- 215
K + ++ LNEF+ + +H LS R ++S
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST----RARVSSPGPP 169
Query: 216 -----ETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AV 269
E +C I + + + YL + +HRDL +N L+ ++ V + DFG +R++ +
Sbjct: 170 PLSCAEQLC--IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 270 GTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSLGCIAYEI 310
+ P+ +M PE I Y +D+W+ G + +EI
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 17 IGEGSFGKVFKA-----IHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 71
IGEG+FG+VF+A + + VA+K++ + + + + ++E + +PNI+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ-ADFQREAALMAEFDNPNIV 113
Query: 72 KFIASHETLNEFVLITEFAHMSLSKLGE 99
K + L+ F +M+ L E
Sbjct: 114 KLLGVCAVGKPMCLL--FEYMAYGDLNE 139
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 121 YQKICLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
Y+ + +IG+G V A + + V ++ I+ S + ++ L+ E + K HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHS 235
NI+ + A+ NE ++T F A+ S +L+ ++E IL ++ AL Y+H
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM--------AVGTHMLTSIKGTPLYMAPE 287
+HR +K ++L++ DG L SM V S+K P +++PE
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPE 189
Query: 288 LIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP 337
++ + + YD +D++S+G A E+ GH PFK + + LL+ + T P
Sbjct: 190 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVP 239
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 11 YQKICLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
Y+ + +IG+G V A + + V ++ I+ S + ++ L+ E + K HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ + A+ NE ++T F
Sbjct: 71 NIVPYRATFIADNELWVVTSF 91
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++ G+FG V+K + + + V + + K R S K + E + +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 76 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 114
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSM-AVGTHMLTSIKGTPL-YMAPEL 288
N +HRD+ +N LL G VA + DFG AR + G + P+ +M PE
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 234
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
E + D WS G + +EI +G+ P+ + S
Sbjct: 235 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 268
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 137
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSM-AVGTHMLTSIKGTPL-YMAPEL 288
N +HRD+ +N LL G VA + DFG AR + G + P+ +M PE
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA 257
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
E + D WS G + +EI +G+ P+ + S
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 122 QKICLIGEGSFGKVFKAIHL----DLKKTVALKII-SKSGRSGKELSSLKQECEIQKHLA 176
+K+ ++G G FG V K + + +K V +K+I KSGR + ++ L
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDHMLAIGSLD 73
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
H +I++ + + L+T++ + L +LL+ ++ + Q+L N + +YY
Sbjct: 74 HAHIVRLLGLCPG-SSLQLVTQY--LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV-GTHMLTSIKGTPL-YMAPELIA 290
L + ++HR+L +NVLL + DFG A + +L S TP+ +MA E I
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK 330
Y H +D+WS G +E+ G P+ + + + LL+
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++ G+FG V+K + + + V + + K R S K + E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LIT+ M LL+ ++ + I Q L N + + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLITQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K L H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-LNHQNIV 97
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 213
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 121 YQKICLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 178
Y+ + +IG+G V A + + V ++ I+ S + ++ L+ E + K HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 179 NIIKFIASHETLNEFVLITEF-AHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHS 235
NI+ + A+ NE ++T F A+ S +L+ ++E IL ++ AL Y+H
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM--------AVGTHMLTSIKGTPLYMAPE 287
+HR +K ++L++ DG L SM V S+K P +++PE
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPE 205
Query: 288 LIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP 337
++ + + YD +D++S+G A E+ GH PFK + + LL+ + T P
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVP 255
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 11 YQKICLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHP 68
Y+ + +IG+G V A + + V ++ I+ S + ++ L+ E + K HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 69 NIIKFIASHETLNEFVLITEF 89
NI+ + A+ NE ++T F
Sbjct: 87 NIVPYRATFIADNELWVVTSF 107
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K L H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-LNHQNIV 111
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 227
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 127 IGEGSFGKVFKAIHL------DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+GE FGKV+K HL + + VA+K + K G + E ++ L HPN+
Sbjct: 17 LGEDRFGKVYKG-HLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 181 IKFIA---------------SHETLNEFVLITEFAHMSLSNLLEQR---KKLSETICVQI 222
+ + SH L+EF L+ H + + + R L V +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEF-LVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTP 281
++ + + + YL S+ V+H+DL +NVL+ + D G R + A + L P
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLKTQDV 334
+ +MAPE I + +D+WS G + +E+ G P+ S ++ +++ + V
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 78 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 50/236 (21%)
Query: 120 KYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL--A 176
+Y+ + +GEG+FGKV + I H + VA+KI+ R + + E ++ +HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY---CEAARSEIQVLEHLNTT 71
Query: 177 HPN----IIKFIASHETLNEFVLITEFAHMSLSNLLEQR----------KKLSETICVQI 222
PN ++ + E ++ E +S + +++ +K++ IC
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC--- 128
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVL-------------LNKDGVAML------CDFGF 263
++ +LHSN++ H DLKP+N+L + +D ++ DFG
Sbjct: 129 -----KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG- 182
Query: 264 ARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
S +++ T Y APE+I + D+WS+GCI E ++G F T
Sbjct: 183 --SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 10 KYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
+Y+ + +GEG+FGKV + I H + VA+KI+ R + + E ++ +HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY---CEAARSEIQVLEHL 68
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 127 IGEGSFGKVFKAIHL------DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI 180
+GE FGKV+K HL + + VA+K + K G + E ++ L HPN+
Sbjct: 34 LGEDRFGKVYKG-HLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 181 IKFIA---------------SHETLNEFVLITEFAHMSLSNLLEQR---KKLSETICVQI 222
+ + SH L+EF L+ H + + + R L V +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEF-LVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM-AVGTHMLTSIKGTP 281
++ + + + YL S+ V+H+DL +NVL+ + D G R + A + L P
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 282 L-YMAPELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLKTQDV 334
+ +MAPE I + +D+WS G + +E+ G P+ S ++ +++ + V
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++G G+FG V+K + + + V + + K R S K + E + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 80 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 16/228 (7%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G + YQ + +G G + +VF+AI++ T K+ K + K+ ++ ++
Sbjct: 34 GNQDDYQLVRKLGRGKYSEVFEAINI----TNNEKVAVKILKPVKKKKIKREIKILENLR 89
Query: 176 AHPNIIKF--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
PNII I L+ F H++ ++ + + L++ + ++ AL Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALV--FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
HS ++HRD+KP NVL++ + + L D+G A G + + + PEL+ +
Sbjct: 148 HSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPF-----KTVSILHLIRLLKTQDV 334
+ YD++ D+WSLGC+ + PF ++ + ++L T+D+
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 437 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 495
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 496 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 555
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 556 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 615
Query: 359 R 359
R
Sbjct: 616 R 616
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 9/241 (3%)
Query: 127 IGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI 184
+G G+FG V K + + KTVA+KI+ L E + + L +P I++ I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 185 ASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
E ++L+ E A + L+ L+Q + + + ++++ + + YL + +HRDL
Sbjct: 438 GICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDL 496
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIKGTPLYMAPELIAERPYDHTADL 300
+NVLL A + DFG ++++ + T K + APE I + +D+
Sbjct: 497 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 556
Query: 301 WSLGCIAYE-IHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQ 358
WS G + +E G P++ + + +L K + + P+ DL+ D
Sbjct: 557 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 616
Query: 359 R 359
R
Sbjct: 617 R 617
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 103
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 164 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 219
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 257
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 113
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 174 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 229
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 267
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 97
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 213
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 123
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 184 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 239
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 277
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 96
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 212
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 96
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 212
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 88
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 149 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 204
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 242
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK-FNHQNIV 111
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 227
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 111
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG AR + ++ + +K +M
Sbjct: 172 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK----WM 227
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 81
Query: 182 KFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETIC-------------VQILSNLIS 228
+ + ++I E M+ +L + L + +Q+ +
Sbjct: 82 RLLGVVSQGQPTLVIMEL--MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAP 286
+ YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+P
Sbjct: 140 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 287 ELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
E + + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 136/328 (41%), Gaps = 77/328 (23%)
Query: 17 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHP-NI 70
+G G+FGKV +A +KK TVA+K++ K G + E +L E +I H+ H N+
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKML-KEGATASEYKALMTELKILTHIGHHLNV 93
Query: 71 IKFI-ASHETLNEFVLITEFAHMS-----LSKLGEPWFHN-----HCQPVKMEKSNGALE 119
+ + A + ++I E+ L + +F N H +P K EK LE
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEP-KKEKMEPGLE 152
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
+ +K LD T + S + K LS +++E + P
Sbjct: 153 QGKK---------------PRLD-SVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPI 196
Query: 180 IIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVL 239
++ + S+ F L RK C+
Sbjct: 197 TMEDLISY----------SFQVARGMEFLSSRK------CI------------------- 221
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT---PL-YMAPELIAERPYD 295
HRDL +N+LL+++ V +CDFG AR + + KG PL +MAPE I ++ Y
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR--KGDTRLPLKWMAPESIFDKIYS 279
Query: 296 HTADLWSLGCIAYEIH-MGHPPFKTVSI 322
+D+WS G + +EI +G P+ V +
Sbjct: 280 TKSDVWSYGVLLWEIFSLGGSPYPGVQM 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 108 PVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKEL 162
P K A E+ + +G G+FGKV +A +KK TVA+K++ K G + E
Sbjct: 16 PYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML-KEGATASEY 74
Query: 163 SSLKQECEIQKHLAHP-NIIKFI-ASHETLNEFVLITEFA-HMSLSNLLEQRKKL 214
+L E +I H+ H N++ + A + ++I E+ + +LSN L+ ++ L
Sbjct: 75 KALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFI 184
+G+G +G+V++ L ++VA+KI S ++ S +E EI L H NI+ FI
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSS-----RDEQSWFRETEIYNTVLLRHDNILGFI 68
Query: 185 ASHETL----NEFVLITEF-AHMSLSNLLEQRKKLSETICVQILSNLISALYYLH----- 234
AS T + LIT + H SL + L QR+ L + +++ + L +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFL-QRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 235 ---SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML----TSIKGTPLYMAPE 287
+ HRD K +NVL+ + + D G A + G+ L GT YMAPE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 288 LIAER-------PYDHTADLWSLGCIAYEI 310
++ E+ Y T D+W+ G + +EI
Sbjct: 188 VLDEQIRTDCFESYKWT-DIWAFGLVLWEI 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 78
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 139 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 198
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 199 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 187 HETLNEFVLITEFAHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+++I + SL + L E K L V + + + S + Y+ +HRDL+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWSL 303
N+L+ ++ V + DFG AR + + P+ + APE + +D+WS
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 304 GCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
G + E+ G P+ V+ L ++ + + P + E+ DL+ KD +R +
Sbjct: 202 GILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPT 261
Query: 362 WPELLHHPLVKDNLSSEIESQNNQD 386
+ E L L S+E + Q ++
Sbjct: 262 F-EYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V+ A + K VA+K + S + + E + K L H ++K A
Sbjct: 196 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRVLHRDL 243
T +ITEF A SL + L+ + + + + + + + ++ +HRDL
Sbjct: 252 V-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWS 302
+ N+L++ V + DFG AR + + P+ + APE I + +D+WS
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 303 LGCIAYEI-HMGHPPFKTVSILHLIRLLK 330
G + EI G P+ +S +IR L+
Sbjct: 371 FGILLMEIVTYGRIPYPGMSNPEVIRALE 399
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 82
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 143 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 202
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 203 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G + YQ + +G G + +VF+AI++ T K++ K + K+ ++ ++
Sbjct: 34 GNQDDYQLVRKLGRGKYSEVFEAINI----TNNEKVVVKILKPVKKKKIKREIKILENLR 89
Query: 176 AHPNIIKF--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
PNII I L+ F H++ ++ + R+ L++ + ++ AL Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALV--FEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYC 147
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
HS ++HRD+KP NV+++ + + L D+G A G + + + PEL+ +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV-ASRYFKGPELLVDY 206
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPF-----KTVSILHLIRLLKTQDV 334
+ YD++ D+WSLGC+ + PF ++ + ++L T+D+
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 15/266 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V+ + + K VA+K + S + + +E + K L H +++ A
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 187 HETLNEFVLITEF-AHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ITE+ A SL + L ++ K+ + + + + Y+ +HRDL
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 136
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWS 302
+ NVL+++ + + DFG AR + + P+ + APE I + +D+WS
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 303 LGCIAYEI-HMGHPPFKTVSILHLIRLLKTQDVTFP--SQVSETYKDLVKGLLEKDASQR 359
G + YEI G P+ + ++ L +Q P + D++K ++ A +R
Sbjct: 197 FGILLYEIVTYGKIPYPGRTNADVMTAL-SQGYRMPRVENCPDELYDIMKMCWKEKAEER 255
Query: 360 LSWPELLHHPLVKDNLSSEIESQNNQ 385
P + V D+ + E Q Q
Sbjct: 256 ---PTFDYLQSVLDDFYTATEGQYQQ 278
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 84
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 85
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 205
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 84
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 145 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 204
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 205 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 91
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 152 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 212 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 104/224 (46%), Gaps = 24/224 (10%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 91
Query: 182 KFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETIC-------------VQILSNLIS 228
+ + ++I E M+ +L + L + +Q+ +
Sbjct: 92 RLLGVVSQGQPTLVIMEL--MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 229 ALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAP 286
+ YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 287 ELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
E + + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 13/212 (6%)
Query: 120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLA 176
+++KI ++ G+FG V+K + + + V + + K R S K + E + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 177 HPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN----LISALYY 232
+P++ + + T + LI + M LL+ ++ + I Q L N + + Y
Sbjct: 83 NPHVCRLLGICLT-STVQLIMQL--MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 LHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPELIA 290
L R++HRDL +NVL+ + DFG A+ + + G P+ +MA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 291 ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
R Y H +D+WS G +E+ G P+ +
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 113
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + + KG P+ +M+PE
Sbjct: 174 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 233
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 234 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 22/264 (8%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V+ A + K VA+K + S + + E + K L H ++K A
Sbjct: 190 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRVLHRDL 243
T +ITEF A SL + L+ + + + + + + + ++ +HRDL
Sbjct: 246 V-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSL 303
+ N+L++ V + DFG AR VG IK T APE I + +D+WS
Sbjct: 305 RAANILVSASLVCKIADFGLAR---VGAKF--PIKWT----APEAINFGSFTIKSDVWSF 355
Query: 304 GCIAYEI-HMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDASQRLS 361
G + EI G P+ +S +IR L + + P E +++ + +R
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER-- 413
Query: 362 WPELLHHPLVKDNLSSEIESQNNQ 385
P + V D+ + ESQ Q
Sbjct: 414 -PTFEYIQSVLDDFYTATESQXQQ 436
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 85
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + KG P+ +M+PE
Sbjct: 146 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 205
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 206 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 76
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N ++ +D + DFG R + KG P+ +M+PE
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPES 196
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 197 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 20/270 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA- 185
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAV 72
Query: 186 -SHETLNEFVLITEFAHMSLSNLL-----EQRKKLSETICVQILSNLISALYYLHSNRVL 239
S E + ++TE+ MS +LL E K L V + + + S + Y+ +
Sbjct: 73 VSEEPI---YIVTEY--MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTA 298
HRDL+ N+L+ ++ V + DFG AR + + P+ + APE + +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 299 DLWSLGCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA 356
D+WS G + E+ G P+ V+ L ++ + + P + E+ DL+ KD
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 247
Query: 357 SQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
+R ++ E L L S+E + Q ++
Sbjct: 248 EERPTF-EYLQAFLEDYFTSTEPQYQPGEN 276
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 20/270 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA- 185
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAV 70
Query: 186 -SHETLNEFVLITEFAHMSLSNLL-----EQRKKLSETICVQILSNLISALYYLHSNRVL 239
S E + ++TE+ MS +LL E K L V + + + S + Y+ +
Sbjct: 71 VSEEPI---YIVTEY--MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTA 298
HRDL+ N+L+ ++ V + DFG AR + + P+ + APE + +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 299 DLWSLGCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA 356
D+WS G + E+ G P+ V+ L ++ + + P + E+ DL+ KD
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 245
Query: 357 SQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
+R ++ E L L S+E + Q ++
Sbjct: 246 EERPTF-EYLQAFLEDYFTSTEPQYQPGEN 274
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 10/209 (4%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V+ A + K VA+K + S + + E + K L H ++K A
Sbjct: 23 LGAGQFGEVWMATYNKHTK-VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 187 HETLNEFVLITEF-AHMSLSNLLEQRKKLSETI--CVQILSNLISALYYLHSNRVLHRDL 243
T +ITEF A SL + L+ + + + + + + + ++ +HRDL
Sbjct: 79 V-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWS 302
+ N+L++ V + DFG AR + + P+ + APE I + +D+WS
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 303 LGCIAYEI-HMGHPPFKTVSILHLIRLLK 330
G + EI G P+ +S +IR L+
Sbjct: 198 FGILLMEIVTYGRIPYPGMSNPEVIRALE 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 124 ICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
I +G+G+FG V + + + VA+K + SG + ++E +I K L
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDF 69
Query: 180 IIKF--IASHETLNEFVLITEF-AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
I+K+ ++ E L+ E+ L + L++ R +L + + S + + YL S
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV--GTHMLTSIKGTPLYM-APELIAER 292
R +HRDL +N+L+ + + DFG A+ + + ++ +P++ APE +++
Sbjct: 130 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 293 PYDHTADLWSLGCIAYEI 310
+ +D+WS G + YE+
Sbjct: 190 IFSRQSDVWSFGVVLYEL 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 20/270 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA- 185
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 186 -SHETLNEFVLITEFAHMSLSNLL-----EQRKKLSETICVQILSNLISALYYLHSNRVL 239
S E + ++TE+ MS +LL E K L V + + + S + Y+ +
Sbjct: 82 VSEEPI---YIVTEY--MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTA 298
HRDL+ N+L+ ++ V + DFG AR + + P+ + APE + +
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 299 DLWSLGCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA 356
D+WS G + E+ G P+ V+ L ++ + + P + E+ DL+ KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 357 SQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
+R ++ E L L S+E + Q ++
Sbjct: 257 EERPTF-EYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE--AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 187 HETLNEFVLITEFAHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLK 244
+++I + SL + L E K L V + + + S + Y+ +HRDL+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 141
Query: 245 PQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT--PL-YMAPELIAERPYDHTADLW 301
N+L+ ++ V + DFG AR + + T+ +G P+ + APE + +D+W
Sbjct: 142 AANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 302 SLGCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQR 359
S G + E+ G P+ V+ L ++ + + P + E+ DL+ KD +R
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
Query: 360 LSWPELLHHPLVKDNLSSEIESQNNQD 386
++ E L L S+E + Q ++
Sbjct: 260 PTF-EYLQAFLEDYFTSTEPQYQPGEN 285
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 15/266 (5%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS 186
+G G FG+V+ + + K VA+K + S + + +E + K L H +++ A
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 187 HETLNEFVLITEF-AHMSLSNLL--EQRKKLSETICVQILSNLISALYYLHSNRVLHRDL 243
+ITEF A SL + L ++ K+ + + + + Y+ +HRDL
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 135
Query: 244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTADLWS 302
+ NVL+++ + + DFG AR + + P+ + APE I + +++WS
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 303 LGCIAYEI-HMGHPPFKTVSILHLIRLLKTQDVTFP--SQVSETYKDLVKGLLEKDASQR 359
G + YEI G P+ + ++ L +Q P + D++K ++ A +R
Sbjct: 196 FGILLYEIVTYGKIPYPGRTNADVMSAL-SQGYRMPRMENCPDELYDIMKMCWKEKAEER 254
Query: 360 LSWPELLHHPLVKDNLSSEIESQNNQ 385
P + V D+ + E Q Q
Sbjct: 255 ---PTFDYLQSVLDDFYTATEGQYQQ 277
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 175
G + Y+ + +G G + +VF+ I+++ + K I K + K+ ++ +Q +
Sbjct: 28 GEQDDYEVVRKVGRGKYSEVFEGINVNNNE----KCIIKILKPVKKKKIKREIKILQNLM 83
Query: 176 AHPNIIKF--IASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYL 233
PNI+K I + LI E+ + + +L L++ + L+ AL Y
Sbjct: 84 GGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYDIRYYIYELLKALDYC 141
Query: 234 HSNRVLHRDLKPQNVLLNKDGVAM-LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE- 291
HS ++HRD+KP NV+++ + + L D+G A G + + + PEL+ +
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV-ASRYFKGPELLVDL 200
Query: 292 RPYDHTADLWSLGCIAYEIHMGHPPF 317
+ YD++ D+WSLGC+ + PF
Sbjct: 201 QDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA- 185
+G+G FG+V+ + VA+K + K G E + QE ++ K L H +++ A
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTL-KPGNMSPE--AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 186 -SHETLNEFVLITEFAHMSLSNLL-----EQRKKLSETICVQILSNLISALYYLHSNRVL 239
S E + ++TE+ MS +LL E K L V + + + S + Y+ +
Sbjct: 249 VSEEPI---YIVTEY--MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 240 HRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL-YMAPELIAERPYDHTA 298
HRDL+ N+L+ ++ V + DFG R + + P+ + APE + +
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 299 DLWSLGCIAYEIHM-GHPPFK-TVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA 356
D+WS G + E+ G P+ V+ L ++ + + P + E+ DL+ KD
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 423
Query: 357 SQRLSWPELLHHPLVKDNLSSEIESQNNQD 386
+R ++ E L L S+E + Q ++
Sbjct: 424 EERPTF-EYLQAFLEDYFTSTEPQXQPGEN 452
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 124 ICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
I +G+G+FG V + + + VA+K + SG + ++E +I K L
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDF 72
Query: 180 IIKF--IASHETLNEFVLITEF-AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
I+K+ ++ L+ E+ L + L++ R +L + + S + + YL S
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYM-APELIAER 292
R +HRDL +N+L+ + + DFG A+ + + +++ +P++ APE +++
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 293 PYDHTADLWSLGCIAYEI 310
+ +D+WS G + YE+
Sbjct: 193 IFSRQSDVWSFGVVLYEL 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 26/260 (10%)
Query: 126 LIGEGSFGKVFKAIHLDLKK------TVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
++G+G FG V +A LK+ VA+K++ + ++ +E K HP+
Sbjct: 30 MLGKGEFGSVREA---QLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86
Query: 180 IIKFIA------SHETLNEFVLITEF-------AHMSLSNLLEQRKKLSETICVQILSNL 226
+ K + + L ++I F A + S + E L V+ + ++
Sbjct: 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146
Query: 227 ISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT-PL-YM 284
+ YL S +HRDL +N +L +D + DFG +R + G + P+ ++
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 285 APELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR-LLKTQDVTFPSQVSE 342
A E +A+ Y +D+W+ G +EI G P+ + + L+ + P + E
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME 266
Query: 343 TYKDLVKGLLEKDASQRLSW 362
DL+ D QR S+
Sbjct: 267 EVYDLMYQCWSADPKQRPSF 286
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 127 IGEGSFGKVFKAIHLDLKKT-----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G+GSFG V++ + + K VA+K ++++ S +E E + K +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVV 78
Query: 182 KFIASHETLNEFVLITEFAHM--------SLSNLLEQRKKLSE---TICVQILSNLISAL 230
+ + ++I E SL +E L+ + +Q+ + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 231 YYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG-TPL-YMAPEL 288
YL++N+ +HRDL +N + +D + DFG R + + KG P+ +M+PE
Sbjct: 139 AYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 198
Query: 289 IAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLL 329
+ + + +D+WS G + +EI + P++ +S ++R +
Sbjct: 199 LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 50/236 (21%)
Query: 120 KYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL--A 176
+Y+ + +GEG+FGKV + I H + VA+KI+ R + + E ++ +HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY---CEAARSEIQVLEHLNTT 71
Query: 177 HPN----IIKFIASHETLNEFVLITEFAHMSLSNLLEQR----------KKLSETICVQI 222
PN ++ + E ++ E +S + +++ +K++ IC
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC--- 128
Query: 223 LSNLISALYYLHSNRVLHRDLKPQNVL-------------LNKDGVAML------CDFGF 263
++ +LHSN++ H DLKP+N+L + +D ++ DFG
Sbjct: 129 -----KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG- 182
Query: 264 ARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT 319
S +++ Y APE+I + D+WS+GCI E ++G F T
Sbjct: 183 --SATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 10 KYQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL 65
+Y+ + +GEG+FGKV + I H + VA+KI+ R + + E ++ +HL
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY---CEAARSEIQVLEHL 68
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 127 IGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII 181
+G G+FG+V++ + VA+K + + EL L + I K H NI+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK-FNHQNIV 97
Query: 182 KFIA-SHETLNEFVLITEFAHMSLSNLL-EQRKKLSETICVQILS------NLISALYYL 233
+ I S ++L F+L+ A L + L E R + S+ + +L ++ YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 234 HSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAVGTH------MLTSIKGTPLYM 284
N +HRD+ +N LL G VA + DFG A+ + ++ + +K +M
Sbjct: 158 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK----WM 213
Query: 285 APELIAERPYDHTADLWSLGCIAYEIH-MGHPPFKTVS 321
PE E + D WS G + +EI +G+ P+ + S
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 13/197 (6%)
Query: 128 GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKEL-SSLKQECEIQKHLAHPNIIKFIAS 186
GEG FG V+K +++ K+ + + +EL QE ++ H N+++ +
Sbjct: 31 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 187 HETLNEFVLITEFAHMSLSNLLEQRKKLSETICV------QILSNLISALYYLHSNRVLH 240
++ L+ + + +LL++ L T + +I + + +LH N +H
Sbjct: 90 SSDGDDLCLV--YVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 241 RDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGTPLYMAPELIAERPYDHTA 298
RD+K N+LL++ A + DFG AR+ + + I GT Y APE + +
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKS 206
Query: 299 DLWSLGCIAYEIHMGHP 315
D++S G + EI G P
Sbjct: 207 DIYSFGVVLLEIITGLP 223
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 124 ICLIGEGSFGKV----FKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN 179
I +G+G+FG V + + + VA+K + SG + ++E +I K L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR--DFQREIQILKALHSDF 85
Query: 180 IIKF--IASHETLNEFVLITEF-AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS 235
I+K+ ++ L+ E+ L + L++ R +L + + S + + YL S
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 236 NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYM-APELIAER 292
R +HRDL +N+L+ + + DFG A+ + + +++ +P++ APE +++
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 293 PYDHTADLWSLGCIAYEI 310
+ +D+WS G + YE+
Sbjct: 206 IFSRQSDVWSFGVVLYEL 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,787,804
Number of Sequences: 62578
Number of extensions: 569687
Number of successful extensions: 5837
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1205
Number of HSP's gapped (non-prelim): 2164
length of query: 549
length of database: 14,973,337
effective HSP length: 104
effective length of query: 445
effective length of database: 8,465,225
effective search space: 3767025125
effective search space used: 3767025125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)