Query         psy18060
Match_columns 549
No_of_seqs    452 out of 3161
Neff          7.7 
Searched_HMMs 46136
Date          Fri Aug 16 21:34:22 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy18060.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18060hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0575|consensus              100.0 7.7E-58 1.7E-62  480.5  26.4  256  119-374    18-275 (592)
  2 KOG0598|consensus              100.0 3.1E-56 6.8E-61  445.4  23.4  269  115-383    21-296 (357)
  3 KOG0581|consensus              100.0 5.8E-56 1.3E-60  443.6  22.7  257  117-376    77-343 (364)
  4 KOG0615|consensus              100.0 1.3E-56 2.8E-61  451.1  17.6  258  117-375   170-444 (475)
  5 KOG0597|consensus              100.0 3.9E-55 8.5E-60  453.1  16.6  257  118-374     1-257 (808)
  6 KOG0593|consensus              100.0 7.4E-55 1.6E-59  423.2  14.0  262  118-379     1-295 (396)
  7 KOG0616|consensus              100.0 1.1E-53 2.3E-58  414.4  21.7  265  116-383    41-312 (355)
  8 KOG0592|consensus              100.0 2.6E-53 5.6E-58  439.7  22.7  266  115-380    69-350 (604)
  9 KOG0595|consensus              100.0   8E-53 1.7E-57  424.3  24.8  259  116-375     7-275 (429)
 10 KOG0583|consensus              100.0   2E-51 4.3E-56  430.4  27.1  258  116-373    14-280 (370)
 11 KOG0605|consensus              100.0 1.9E-51 4.1E-56  426.2  24.2  264  116-380   138-457 (550)
 12 KOG0591|consensus              100.0 2.4E-53 5.1E-58  409.0   9.1  255  114-373    14-281 (375)
 13 KOG0588|consensus              100.0 8.5E-52 1.8E-56  436.1  21.5  262  115-377     8-272 (786)
 14 KOG0033|consensus              100.0   3E-52 6.4E-57  394.4   8.0  256  118-374    10-273 (355)
 15 KOG0694|consensus              100.0 4.6E-50 9.9E-55  426.1  24.2  269  115-383   364-639 (694)
 16 KOG0661|consensus              100.0 1.2E-50 2.6E-55  414.2  14.5  259  117-377     8-300 (538)
 17 PTZ00263 protein kinase A cata 100.0 5.9E-49 1.3E-53  407.4  26.7  264  113-379    12-282 (329)
 18 KOG0659|consensus              100.0 1.3E-49 2.8E-54  380.9  19.3  256  119-374     2-287 (318)
 19 KOG0600|consensus              100.0 8.8E-50 1.9E-54  410.5  19.1  256  117-372   115-404 (560)
 20 KOG0198|consensus              100.0 1.5E-49 3.3E-54  402.5  19.8  257  118-376    16-284 (313)
 21 KOG0580|consensus              100.0 5.1E-50 1.1E-54  378.8  13.3  259  113-373    16-278 (281)
 22 KOG0585|consensus              100.0 3.5E-49 7.5E-54  403.0  20.2  265  112-376    90-380 (576)
 23 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-48 3.3E-53  403.2  25.1  255  125-379     1-262 (323)
 24 KOG0660|consensus              100.0 3.6E-49 7.8E-54  393.3  19.2  261  119-379    22-321 (359)
 25 cd05612 STKc_PRKX_like Catalyt 100.0 1.9E-48 4.1E-53  396.3  24.8  256  119-377     1-263 (291)
 26 KOG0663|consensus              100.0 3.3E-49 7.1E-54  388.3  17.7  260  115-374    72-367 (419)
 27 KOG0582|consensus              100.0 8.4E-48 1.8E-52  390.7  26.0  262  114-376    21-301 (516)
 28 cd05585 STKc_YPK1_like Catalyt 100.0 7.2E-48 1.6E-52  396.1  25.6  251  127-377     1-256 (312)
 29 KOG0578|consensus              100.0 7.3E-49 1.6E-53  409.7  18.1  255  117-374   271-529 (550)
 30 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.5E-47 5.4E-52  387.3  27.8  254  117-371     3-288 (288)
 31 PTZ00426 cAMP-dependent protei 100.0 1.7E-47 3.8E-52  398.6  26.6  262  114-378    25-294 (340)
 32 cd05593 STKc_PKB_gamma Catalyt 100.0 2.1E-47 4.6E-52  395.7  25.8  255  125-379     1-262 (328)
 33 cd05595 STKc_PKB_beta Catalyti 100.0 3.6E-47 7.7E-52  393.1  25.8  254  125-378     1-261 (323)
 34 KOG0032|consensus              100.0   7E-47 1.5E-51  396.3  28.1  259  114-374    30-299 (382)
 35 cd05631 STKc_GRK4 Catalytic do 100.0 9.4E-47   2E-51  382.5  27.9  261  120-381     1-274 (285)
 36 cd07859 STKc_TDY_MAPK_plant Ca 100.0   5E-47 1.1E-51  392.5  26.2  257  120-376     1-298 (338)
 37 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-46 2.7E-51  389.0  28.8  260  120-379     1-268 (324)
 38 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.8E-47 1.7E-51  386.2  27.1  257  117-374     3-294 (303)
 39 cd05616 STKc_cPKC_beta Catalyt 100.0 7.9E-47 1.7E-51  390.2  27.2  261  120-380     1-269 (323)
 40 cd05590 STKc_nPKC_eta Catalyti 100.0 5.1E-47 1.1E-51  391.4  25.6  255  125-379     1-264 (320)
 41 cd07848 STKc_CDKL5 Catalytic d 100.0 6.3E-47 1.4E-51  382.9  25.5  253  119-371     1-287 (287)
 42 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-46 2.6E-51  395.4  28.0  260  119-379     1-304 (363)
 43 cd05620 STKc_nPKC_delta Cataly 100.0 8.4E-47 1.8E-51  389.1  25.2  254  125-378     1-258 (316)
 44 KOG0611|consensus              100.0 5.4E-48 1.2E-52  386.6  15.7  256  116-373    50-308 (668)
 45 cd05594 STKc_PKB_alpha Catalyt 100.0 4.3E-47 9.3E-52  392.5  23.0  253  125-377     1-261 (325)
 46 cd05591 STKc_nPKC_epsilon Cata 100.0   1E-46 2.2E-51  389.1  25.6  255  125-379     1-265 (321)
 47 cd05589 STKc_PKN Catalytic dom 100.0 1.6E-46 3.4E-51  388.2  26.9  256  121-377     1-266 (324)
 48 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-46 2.6E-51  388.2  25.5  253  125-377     1-261 (318)
 49 cd05592 STKc_nPKC_theta_delta  100.0 1.3E-46 2.9E-51  387.7  25.7  255  125-379     1-259 (316)
 50 cd05584 STKc_p70S6K Catalytic  100.0 2.1E-46 4.5E-51  387.3  26.1  256  124-379     1-267 (323)
 51 KOG0610|consensus              100.0 4.8E-47 1.1E-51  382.5  20.6  265  115-379    73-403 (459)
 52 cd05599 STKc_NDR_like Catalyti 100.0   2E-46 4.4E-51  393.2  26.1  258  119-377     1-305 (364)
 53 KOG0201|consensus              100.0 1.2E-48 2.7E-53  396.7   8.3  256  119-375    13-270 (467)
 54 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-46 2.5E-51  392.2  23.2  259  119-378     1-295 (350)
 55 KOG0192|consensus              100.0 2.5E-46 5.5E-51  389.1  25.5  247  119-367    41-298 (362)
 56 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-46 5.6E-51  386.4  25.5  255  125-379     1-262 (323)
 57 cd05625 STKc_LATS1 Catalytic d 100.0 4.5E-46 9.8E-51  393.5  27.6  256  120-376     2-313 (382)
 58 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.7E-46   8E-51  386.7  26.2  257  119-378     1-267 (333)
 59 KOG0594|consensus              100.0 8.3E-47 1.8E-51  377.3  20.4  258  118-375    10-309 (323)
 60 cd05588 STKc_aPKC Catalytic do 100.0 4.3E-46 9.3E-51  386.0  26.3  253  125-377     1-271 (329)
 61 cd05626 STKc_LATS2 Catalytic d 100.0   7E-46 1.5E-50  392.2  28.2  258  120-377     2-314 (381)
 62 cd05619 STKc_nPKC_theta Cataly 100.0 6.1E-46 1.3E-50  382.9  26.5  255  125-379     1-259 (316)
 63 KOG0599|consensus              100.0 1.9E-47   4E-52  366.6  13.6  257  117-374    15-289 (411)
 64 cd05615 STKc_cPKC_alpha Cataly 100.0 1.1E-45 2.4E-50  381.9  28.1  261  120-380     1-269 (323)
 65 KOG4717|consensus              100.0 6.6E-47 1.4E-51  387.8  18.5  256  119-375    18-277 (864)
 66 cd05629 STKc_NDR_like_fungal C 100.0 4.7E-46   1E-50  392.7  25.3  257  119-376     1-313 (377)
 67 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-45 2.4E-50  374.3  26.9  252  119-371     1-290 (290)
 68 cd05582 STKc_RSK_N N-terminal  100.0 2.3E-46 4.9E-51  385.8  22.0  254  125-378     2-264 (318)
 69 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-45 2.6E-50  382.8  26.5  252  125-376     1-270 (329)
 70 cd05627 STKc_NDR2 Catalytic do 100.0 7.3E-46 1.6E-50  388.9  24.6  260  119-379     1-304 (360)
 71 KOG1035|consensus              100.0 1.1E-46 2.4E-51  418.8  18.7  352    8-373   478-876 (1351)
 72 cd05617 STKc_aPKC_zeta Catalyt 100.0   2E-45 4.3E-50  380.7  26.6  255  125-379     1-271 (327)
 73 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-45 4.1E-50  381.0  26.3  258  120-377     1-276 (332)
 74 cd05598 STKc_LATS Catalytic do 100.0 7.6E-46 1.7E-50  390.8  23.7  257  119-376     1-309 (376)
 75 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-45 2.6E-50  381.8  24.1  255  125-379     1-262 (325)
 76 cd05596 STKc_ROCK Catalytic do 100.0 2.2E-45 4.7E-50  387.2  26.4  259  117-376    41-312 (370)
 77 KOG0658|consensus              100.0 1.9E-46 4.2E-51  374.4  17.1  253  118-377    23-315 (364)
 78 cd05608 STKc_GRK1 Catalytic do 100.0 2.8E-45 6.2E-50  370.7  25.9  252  127-378     1-267 (280)
 79 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-45 2.6E-50  381.7  23.5  255  125-379     1-262 (325)
 80 KOG0589|consensus              100.0 1.9E-46 4.2E-51  389.3  17.5  259  117-375     2-265 (426)
 81 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-45 8.2E-50  383.2  27.5  257  116-375    18-322 (359)
 82 PHA03212 serine/threonine kina 100.0   3E-45 6.5E-50  388.9  26.6  250  117-374    90-382 (391)
 83 cd07872 STKc_PCTAIRE2 Catalyti 100.0   6E-45 1.3E-49  373.3  27.5  258  116-374     3-292 (309)
 84 cd05603 STKc_SGK2 Catalytic do 100.0 2.1E-45 4.5E-50  379.1  24.2  254  125-378     1-261 (321)
 85 cd07853 STKc_NLK Catalytic dom 100.0   3E-45 6.6E-50  385.9  25.6  255  120-374     1-294 (372)
 86 PTZ00036 glycogen synthase kin 100.0 3.1E-45 6.8E-50  394.5  25.8  251  117-374    64-357 (440)
 87 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-45 9.1E-50  385.0  26.1  258  117-375    41-311 (370)
 88 cd07863 STKc_CDK4 Catalytic do 100.0   6E-45 1.3E-49  368.3  25.9  251  120-371     1-288 (288)
 89 cd06649 PKc_MEK2 Catalytic dom 100.0 1.5E-44 3.3E-49  374.6  29.6  254  118-374     4-307 (331)
 90 cd05601 STKc_CRIK Catalytic do 100.0 2.4E-45 5.1E-50  380.0  23.4  258  119-377     1-272 (330)
 91 cd07875 STKc_JNK1 Catalytic do 100.0 8.8E-45 1.9E-49  381.1  26.8  255  117-374    22-324 (364)
 92 KOG0986|consensus              100.0 1.1E-46 2.5E-51  382.3  11.8  284   98-382   164-460 (591)
 93 cd05586 STKc_Sck1_like Catalyt 100.0 1.8E-45   4E-50  381.0  21.0  252  127-378     1-263 (330)
 94 cd07874 STKc_JNK3 Catalytic do 100.0 9.4E-45   2E-49  379.4  26.4  256  117-375    15-318 (355)
 95 cd05605 STKc_GRK4_like Catalyt 100.0 2.4E-44 5.2E-49  364.9  27.5  259  120-379     1-272 (285)
 96 PTZ00284 protein kinase; Provi 100.0 1.8E-44   4E-49  391.5  27.8  253  118-376   128-446 (467)
 97 KOG0690|consensus              100.0 2.4E-46 5.1E-51  366.2  11.5  264  116-379   165-435 (516)
 98 PF00069 Pkinase:  Protein kina 100.0 7.8E-45 1.7E-49  360.6  22.6  251  121-371     1-260 (260)
 99 KOG0574|consensus              100.0 1.5E-47 3.3E-52  371.1   2.1  257  119-379    33-294 (502)
100 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-44 5.5E-49  379.2  26.7  259  116-375    40-311 (371)
101 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-44 2.8E-49  376.4  23.1  255  117-375    13-305 (343)
102 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.3E-44 1.4E-48  364.2  27.6  258  116-374     3-292 (301)
103 cd05597 STKc_DMPK_like Catalyt 100.0 8.6E-44 1.9E-48  369.1  28.8  261  119-379     1-277 (331)
104 cd07861 STKc_CDK1_euk Catalyti 100.0 7.5E-44 1.6E-48  359.4  27.5  252  120-371     1-285 (285)
105 cd08223 STKc_Nek4 Catalytic do 100.0 2.1E-43 4.5E-48  350.5  29.5  252  120-371     1-257 (257)
106 PTZ00283 serine/threonine prot 100.0 8.8E-44 1.9E-48  388.4  29.4  262  115-376    28-305 (496)
107 KOG0667|consensus              100.0 1.6E-44 3.4E-49  383.7  22.2  251  118-374   185-508 (586)
108 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-43   5E-48  349.6  29.1  252  120-371     1-256 (256)
109 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-43 3.5E-48  359.2  28.7  259  119-380     1-266 (290)
110 cd07839 STKc_CDK5 Catalytic do 100.0 2.8E-44 6.2E-49  362.6  22.9  252  120-371     1-284 (284)
111 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-43   4E-48  352.0  28.4  253  119-371     2-263 (263)
112 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-43 2.4E-48  368.2  26.7  261  119-379     1-277 (332)
113 PLN00034 mitogen-activated pro 100.0 6.4E-44 1.4E-48  373.2  25.0  255  116-375    71-335 (353)
114 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-43 2.3E-48  368.4  26.0  261  119-379     1-277 (331)
115 cd06650 PKc_MEK1 Catalytic dom 100.0 2.1E-43 4.5E-48  366.7  27.4  254  118-374     4-305 (333)
116 PTZ00267 NIMA-related protein  100.0   3E-43 6.5E-48  383.0  29.7  256  117-374    65-329 (478)
117 KOG0577|consensus              100.0 3.5E-45 7.5E-50  380.2  13.4  253  120-376    27-286 (948)
118 KOG0579|consensus              100.0 3.3E-45 7.2E-50  382.0  11.7  255  119-375    32-296 (1187)
119 PHA03207 serine/threonine kina 100.0 4.3E-43 9.3E-48  372.4  28.1  251  118-375    91-382 (392)
120 cd07868 STKc_CDK8 Catalytic do 100.0 2.2E-43 4.7E-48  362.6  24.9  244  124-371     6-317 (317)
121 cd07847 STKc_CDKL1_4 Catalytic 100.0   6E-43 1.3E-47  352.7  27.5  253  119-371     1-286 (286)
122 cd05630 STKc_GRK6 Catalytic do 100.0 4.9E-43 1.1E-47  355.4  26.8  256  120-376     1-269 (285)
123 cd05607 STKc_GRK7 Catalytic do 100.0 4.3E-43 9.3E-48  354.2  26.2  252  127-379     1-265 (277)
124 cd05632 STKc_GRK5 Catalytic do 100.0   1E-42 2.2E-47  353.0  28.1  259  120-379     1-272 (285)
125 KOG0197|consensus              100.0 7.9E-44 1.7E-48  371.1  20.4  244  118-365   205-454 (468)
126 cd06645 STKc_MAP4K3 Catalytic  100.0 3.6E-43 7.8E-48  351.4  24.5  251  118-370     8-267 (267)
127 cd07845 STKc_CDK10 Catalytic d 100.0 7.1E-43 1.5E-47  357.7  27.0  258  117-374     5-296 (309)
128 cd06628 STKc_MAPKKK_Byr2_like  100.0 1.6E-42 3.5E-47  346.4  27.7  252  120-371     1-267 (267)
129 cd07860 STKc_CDK2_3 Catalytic  100.0 6.8E-43 1.5E-47  352.6  25.0  252  120-371     1-284 (284)
130 cd06646 STKc_MAP4K5 Catalytic  100.0 9.4E-43   2E-47  348.4  25.7  251  118-370     8-267 (267)
131 cd06611 STKc_SLK_like Catalyti 100.0 7.4E-43 1.6E-47  351.8  25.1  254  119-374     5-268 (280)
132 cd08218 STKc_Nek1 Catalytic do 100.0   2E-42 4.4E-47  343.5  27.7  252  120-371     1-256 (256)
133 cd05574 STKc_phototropin_like  100.0 2.4E-42 5.2E-47  354.7  29.0  261  119-379     1-300 (316)
134 PHA03209 serine/threonine kina 100.0 3.4E-43 7.4E-48  368.6  23.0  247  118-373    65-356 (357)
135 cd08217 STKc_Nek2 Catalytic do 100.0 2.8E-42 6.1E-47  342.5  28.0  252  120-371     1-265 (265)
136 cd06609 STKc_MST3_like Catalyt 100.0 1.7E-42 3.6E-47  348.2  26.4  256  119-376     1-259 (274)
137 cd06613 STKc_MAP4K3_like Catal 100.0 2.6E-42 5.7E-47  343.2  27.4  250  119-370     3-262 (262)
138 cd06644 STKc_STK10_LOK Catalyt 100.0 3.1E-42 6.7E-47  350.0  28.4  259  116-376     9-277 (292)
139 cd08221 STKc_Nek9 Catalytic do 100.0 5.9E-42 1.3E-46  340.1  29.8  252  120-371     1-256 (256)
140 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-42 2.7E-47  359.4  25.8  252  123-374     2-313 (327)
141 cd06643 STKc_SLK Catalytic dom 100.0 2.3E-42 4.9E-47  348.9  27.0  252  121-374     7-268 (282)
142 cd06655 STKc_PAK2 Catalytic do 100.0 4.4E-42 9.5E-47  350.5  28.7  254  118-374    18-275 (296)
143 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.1E-42 2.3E-47  361.1  24.5  249  118-367     6-329 (338)
144 cd05578 STKc_Yank1 Catalytic d 100.0 8.5E-43 1.8E-47  346.9  22.7  251  120-371     1-258 (258)
145 cd06615 PKc_MEK Catalytic doma 100.0 4.2E-42 9.1E-47  352.5  28.3  253  119-374     1-293 (308)
146 cd07837 STKc_CdkB_plant Cataly 100.0   3E-42 6.6E-47  349.7  26.9  254  119-372     1-295 (295)
147 PHA02988 hypothetical protein; 100.0 2.3E-42   5E-47  350.6  26.0  238  125-367    26-274 (283)
148 PTZ00266 NIMA-related protein  100.0 2.6E-42 5.7E-47  391.5  29.1  263  113-376     7-303 (1021)
149 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.9E-42 8.5E-47  346.5  27.3  256  119-376     1-269 (283)
150 cd05609 STKc_MAST Catalytic do 100.0 8.4E-42 1.8E-46  349.4  30.1  261  119-379     1-284 (305)
151 cd06654 STKc_PAK1 Catalytic do 100.0 5.9E-42 1.3E-46  349.4  28.7  255  117-374    18-276 (296)
152 cd06637 STKc_TNIK Catalytic do 100.0 3.4E-42 7.4E-47  344.9  26.5  250  119-371     6-272 (272)
153 PLN00009 cyclin-dependent kina 100.0 3.9E-42 8.5E-47  349.3  27.2  257  118-374     1-290 (294)
154 cd05572 STKc_cGK_PKG Catalytic 100.0 3.3E-42 7.2E-47  343.4  26.2  248  127-375     1-259 (262)
155 PHA03211 serine/threonine kina 100.0 2.4E-42 5.1E-47  372.8  26.8  248  118-373   168-460 (461)
156 cd07843 STKc_CDC2L1 Catalytic  100.0 1.9E-42 4.1E-47  351.4  24.6  255  117-371     3-293 (293)
157 cd07832 STKc_CCRK Catalytic do 100.0 4.9E-42 1.1E-46  346.1  27.3  253  120-372     1-286 (286)
158 cd07850 STKc_JNK Catalytic dom 100.0 3.1E-42 6.6E-47  360.3  26.7  257  117-376    14-319 (353)
159 cd07865 STKc_CDK9 Catalytic do 100.0   4E-42 8.7E-47  350.7  26.6  256  116-371     9-310 (310)
160 cd07844 STKc_PCTAIRE_like Cata 100.0   5E-42 1.1E-46  347.7  27.1  254  117-371     3-291 (291)
161 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.7E-42 3.7E-47  349.7  23.2  253  119-371     1-286 (286)
162 KOG0607|consensus              100.0 1.3E-43 2.7E-48  346.6  14.4  251  124-376    83-369 (463)
163 cd07841 STKc_CDK7 Catalytic do 100.0 3.9E-42 8.4E-47  349.7  25.6  257  120-376     1-290 (298)
164 cd06619 PKc_MKK5 Catalytic dom 100.0   1E-41 2.3E-46  344.0  28.5  249  119-374     1-259 (279)
165 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-41 2.3E-46  337.7  28.1  251  120-371     1-256 (256)
166 KOG4236|consensus              100.0 8.7E-44 1.9E-48  365.6  13.3  247  125-374   570-825 (888)
167 cd06612 STKc_MST1_2 Catalytic  100.0 3.8E-42 8.2E-47  340.9  24.7  249  119-371     3-256 (256)
168 cd06651 STKc_MEKK3 Catalytic d 100.0 8.8E-42 1.9E-46  341.7  27.5  253  119-372     2-265 (266)
169 cd06656 STKc_PAK3 Catalytic do 100.0 5.6E-42 1.2E-46  349.7  26.4  256  116-374    16-275 (297)
170 cd06610 STKc_OSR1_SPAK Catalyt 100.0 9.2E-42   2E-46  339.9  27.2  252  119-371     1-267 (267)
171 cd06652 STKc_MEKK2 Catalytic d 100.0 1.5E-41 3.3E-46  339.5  28.9  253  119-372     2-265 (265)
172 KOG0604|consensus              100.0 9.6E-44 2.1E-48  345.1  12.5  251  116-374    58-328 (400)
173 cd07835 STKc_CDK1_like Catalyt 100.0 4.7E-42   1E-46  346.2  25.2  251  121-371     1-283 (283)
174 KOG0662|consensus              100.0   2E-43 4.3E-48  320.8  13.5  257  119-375     2-290 (292)
175 cd06631 STKc_YSK4 Catalytic do 100.0   1E-41 2.3E-46  340.4  27.4  251  120-371     1-265 (265)
176 cd07867 STKc_CDC2L6 Catalytic  100.0 3.4E-42 7.3E-47  353.3  24.3  244  124-371     6-317 (317)
177 KOG0603|consensus              100.0 3.5E-43 7.6E-48  371.9  17.4  242  118-371   321-566 (612)
178 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-41 3.5E-46  344.2  29.0  255  115-372    18-291 (291)
179 KOG0612|consensus              100.0 6.5E-44 1.4E-48  394.0  12.3  264  116-380    72-350 (1317)
180 KOG0586|consensus              100.0 7.2E-43 1.6E-47  367.8  19.2  264  113-377    50-315 (596)
181 cd06632 STKc_MEKK1_plant Catal 100.0 1.5E-41 3.2E-46  336.7  27.4  251  120-371     1-258 (258)
182 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-41 3.6E-46  344.1  28.2  254  117-371     3-291 (291)
183 cd06630 STKc_MEKK1 Catalytic d 100.0 5.8E-42 1.3E-46  342.2  24.4  253  120-372     1-268 (268)
184 cd08219 STKc_Nek3 Catalytic do 100.0 2.2E-41 4.7E-46  336.2  27.9  248  120-368     1-252 (255)
185 cd07855 STKc_ERK5 Catalytic do 100.0 3.6E-42 7.8E-47  357.0  23.0  260  119-378     5-304 (334)
186 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-41   3E-46  342.1  26.6  248  121-371     1-282 (282)
187 cd07833 STKc_CDKL Catalytic do 100.0 8.7E-42 1.9E-46  344.6  25.1  253  119-371     1-288 (288)
188 KOG0696|consensus              100.0   2E-43 4.2E-48  354.5  12.7  269  118-386   348-624 (683)
189 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-41   3E-46  342.7  26.1  251  120-371     1-284 (284)
190 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.1E-42 1.1E-46  356.4  23.5  257  119-375     5-298 (337)
191 cd06623 PKc_MAPKK_plant_like C 100.0 2.7E-41 5.9E-46  336.0  27.6  254  119-373     1-261 (264)
192 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-41 3.7E-46  339.1  26.2  252  117-371     4-275 (275)
193 cd08225 STKc_Nek5 Catalytic do 100.0 1.5E-41 3.3E-46  336.8  25.6  252  120-371     1-257 (257)
194 cd06638 STKc_myosinIIIA Cataly 100.0 2.1E-41 4.5E-46  342.0  27.0  257  112-371    11-286 (286)
195 cd06626 STKc_MEKK4 Catalytic d 100.0 3.6E-41 7.8E-46  335.4  28.2  252  120-371     1-264 (264)
196 cd05581 STKc_PDK1 Catalytic do 100.0   8E-42 1.7E-46  342.7  23.6  253  119-371     1-280 (280)
197 cd06622 PKc_MAPKK_PBS2_like Ca 100.0   8E-42 1.7E-46  345.4  23.8  253  119-374     1-268 (286)
198 cd06640 STKc_MST4 Catalytic do 100.0 2.1E-41 4.6E-46  341.2  26.4  254  119-374     4-259 (277)
199 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.9E-41   4E-46  342.0  26.0  252  117-371    14-282 (282)
200 cd06627 STKc_Cdc7_like Catalyt 100.0 6.6E-41 1.4E-45  330.9  29.2  252  120-371     1-254 (254)
201 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.5E-41 5.5E-46  338.9  26.4  249  118-367     4-260 (266)
202 cd05633 STKc_GRK3 Catalytic do 100.0 2.7E-41 5.9E-46  341.6  26.9  249  126-376     1-263 (279)
203 cd05577 STKc_GRK Catalytic dom 100.0 2.1E-41 4.5E-46  341.3  25.8  249  127-376     1-262 (277)
204 cd05048 PTKc_Ror Catalytic Dom 100.0 1.8E-41 3.8E-46  342.1  25.3  250  118-368     4-279 (283)
205 cd06605 PKc_MAPKK Catalytic do 100.0 7.1E-42 1.5E-46  341.0  21.7  252  120-374     2-263 (265)
206 cd07834 STKc_MAPK Catalytic do 100.0 7.7E-42 1.7E-46  353.1  22.6  257  120-376     1-297 (330)
207 cd05096 PTKc_DDR1 Catalytic do 100.0 4.7E-41   1E-45  343.4  27.8  247  119-366     5-299 (304)
208 cd05606 STKc_beta_ARK Catalyti 100.0 3.7E-41   8E-46  340.3  26.6  252  126-379     1-266 (278)
209 cd08215 STKc_Nek Catalytic dom 100.0 6.7E-41 1.5E-45  330.9  27.8  252  120-371     1-258 (258)
210 KOG4721|consensus              100.0 3.2E-43 6.9E-48  364.3  11.5  240  118-369   123-365 (904)
211 cd06606 STKc_MAPKKK Catalytic  100.0 1.1E-40 2.3E-45  329.0  29.0  252  120-371     1-260 (260)
212 cd06607 STKc_TAO Catalytic dom 100.0 7.1E-41 1.5E-45  342.8  28.7  254  118-375    14-274 (307)
213 cd06624 STKc_ASK Catalytic dom 100.0 6.2E-41 1.3E-45  335.7  27.7  249  121-371    10-268 (268)
214 KOG0983|consensus              100.0 1.8E-42   4E-47  332.5  15.4  258  117-376    90-357 (391)
215 cd07849 STKc_ERK1_2_like Catal 100.0 3.2E-41 6.8E-46  350.2  26.0  258  118-377     4-301 (336)
216 cd05579 STKc_MAST_like Catalyt 100.0 2.3E-41 4.9E-46  336.0  23.6  248  127-374     1-263 (265)
217 cd06629 STKc_MAPKKK_Bck1_like  100.0 5.3E-41 1.1E-45  336.6  26.2  252  120-371     2-272 (272)
218 cd06616 PKc_MKK4 Catalytic dom 100.0 1.8E-41 3.9E-46  343.2  22.9  255  119-375     4-274 (288)
219 cd06658 STKc_PAK5 Catalytic do 100.0 1.6E-41 3.4E-46  345.8  22.2  255  119-376    22-280 (292)
220 cd06648 STKc_PAK_II Catalytic  100.0   1E-40 2.2E-45  338.3  27.9  253  120-375    20-276 (285)
221 cd07842 STKc_CDK8_like Catalyt 100.0 4.2E-41 9.1E-46  344.4  25.4  252  120-371     1-316 (316)
222 cd05106 PTKc_CSF-1R Catalytic  100.0 2.5E-41 5.3E-46  356.9  24.1  251  116-367    35-367 (374)
223 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.9E-41 1.1E-45  350.1  26.1  255  117-375    13-305 (343)
224 cd05611 STKc_Rim15_like Cataly 100.0 5.8E-41 1.3E-45  334.1  25.4  247  125-375     2-258 (260)
225 PHA03390 pk1 serine/threonine- 100.0 6.5E-41 1.4E-45  336.7  25.8  244  119-373    14-267 (267)
226 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-41 2.5E-46  342.9  20.1  253  120-374     5-259 (277)
227 cd06917 STKc_NAK1_like Catalyt 100.0 8.6E-41 1.9E-45  336.0  25.8  254  120-375     2-262 (277)
228 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-40 2.9E-45  335.4  27.1  254  120-375     5-260 (277)
229 cd05118 STKc_CMGC Catalytic do 100.0 4.1E-41 8.9E-46  338.5  23.3  251  121-371     1-283 (283)
230 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.5E-40 5.4E-45  330.8  28.7  252  119-371     2-264 (264)
231 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.2E-41 1.3E-45  339.0  24.6  254  118-374     4-272 (284)
232 KOG0596|consensus              100.0 6.4E-42 1.4E-46  355.0  17.7  253  119-373   361-632 (677)
233 cd05116 PTKc_Syk Catalytic dom 100.0 1.2E-40 2.7E-45  331.7  25.7  241  126-367     2-250 (257)
234 cd08228 STKc_Nek6 Catalytic do 100.0 2.3E-40 4.9E-45  330.9  27.6  250  119-368     2-261 (267)
235 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.7E-41 2.1E-45  348.2  25.8  258  117-378    15-310 (345)
236 cd07866 STKc_BUR1 Catalytic do 100.0   8E-41 1.7E-45  341.3  24.6  255  117-371     6-311 (311)
237 cd05104 PTKc_Kit Catalytic dom 100.0   7E-41 1.5E-45  353.5  24.6  250  118-368    34-370 (375)
238 KOG0584|consensus              100.0 4.8E-42   1E-46  361.9  15.5  249  122-374    43-302 (632)
239 cd00192 PTKc Catalytic domain  100.0 1.7E-40 3.7E-45  328.7  25.8  243  125-368     1-260 (262)
240 PTZ00024 cyclin-dependent prot 100.0 1.2E-40 2.6E-45  345.3  25.7  258  118-375     7-320 (335)
241 cd05123 STKc_AGC Catalytic dom 100.0 1.2E-40 2.5E-45  329.1  24.4  245  127-371     1-250 (250)
242 cd07851 STKc_p38 Catalytic dom 100.0 6.6E-41 1.4E-45  349.0  23.8  256  117-376    13-306 (343)
243 cd07840 STKc_CDK9_like Catalyt 100.0 1.9E-40   4E-45  334.0  26.2  251  121-371     1-287 (287)
244 cd05052 PTKc_Abl Catalytic dom 100.0 2.2E-40 4.8E-45  331.0  26.5  248  118-368     5-258 (263)
245 KOG4279|consensus              100.0 3.1E-42 6.6E-47  363.1  13.5  248  125-374   581-838 (1226)
246 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-40 2.9E-45  334.8  24.7  249  118-367     4-276 (280)
247 cd07838 STKc_CDK4_6_like Catal 100.0   2E-40 4.4E-45  334.1  26.0  250  121-371     1-287 (287)
248 PHA03210 serine/threonine kina 100.0 4.6E-41   1E-45  367.7  23.0  261  116-376   145-462 (501)
249 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-40 5.4E-45  327.5  26.1  250  120-371     1-256 (256)
250 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-40 3.3E-45  338.3  25.2  255  117-371     5-302 (302)
251 cd06659 STKc_PAK6 Catalytic do 100.0 7.2E-41 1.6E-45  341.7  22.7  253  119-374    21-277 (297)
252 cd05061 PTKc_InsR Catalytic do 100.0 4.7E-40   1E-44  333.5  28.5  257  117-374     4-286 (288)
253 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.1E-40 8.8E-45  327.5  27.3  246  118-367     3-253 (256)
254 cd05084 PTKc_Fes Catalytic dom 100.0 2.5E-40 5.3E-45  328.1  25.7  242  125-367     1-248 (252)
255 cd05062 PTKc_IGF-1R Catalytic  100.0 3.2E-40 6.9E-45  332.4  26.8  251  117-368     4-274 (277)
256 cd05093 PTKc_TrkB Catalytic do 100.0 3.3E-40 7.2E-45  334.6  27.0  247  119-367     5-274 (288)
257 cd06614 STKc_PAK Catalytic dom 100.0 2.9E-40 6.4E-45  334.2  26.5  256  116-374    16-276 (286)
258 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-40 7.1E-45  333.3  26.8  250  118-368     4-279 (283)
259 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.8E-40   4E-45  345.6  25.7  253  119-374     5-306 (342)
260 cd07857 STKc_MPK1 Catalytic do 100.0 2.7E-40 5.8E-45  342.7  26.7  255  120-374     1-298 (332)
261 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.4E-40 1.6E-44  331.9  29.2  256  119-377     1-275 (287)
262 cd07829 STKc_CDK_like Catalyti 100.0   1E-40 2.2E-45  335.4  22.6  251  121-371     1-282 (282)
263 cd06647 STKc_PAK_I Catalytic d 100.0 1.8E-40 3.9E-45  338.0  24.4  254  118-374    18-275 (293)
264 cd05075 PTKc_Axl Catalytic dom 100.0 2.7E-40 5.9E-45  331.2  25.4  247  122-368     2-267 (272)
265 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-40 4.1E-45  345.5  24.9  253  119-376    15-305 (342)
266 cd05032 PTKc_InsR_like Catalyt 100.0 4.6E-40 9.9E-45  330.4  26.7  249  118-367     5-273 (277)
267 cd05033 PTKc_EphR Catalytic do 100.0 5.8E-40 1.3E-44  328.3  27.3  250  118-368     3-261 (266)
268 cd07852 STKc_MAPK15 Catalytic  100.0 1.2E-40 2.6E-45  345.8  23.1  257  117-374     5-301 (337)
269 cd05122 PKc_STE Catalytic doma 100.0 8.8E-40 1.9E-44  321.1  27.9  248  120-370     1-253 (253)
270 cd05035 PTKc_Axl_like Catalyti 100.0 4.2E-40 9.1E-45  329.4  25.9  248  121-368     1-268 (273)
271 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8.9E-40 1.9E-44  325.9  28.0  249  119-367     2-260 (267)
272 cd06618 PKc_MKK7 Catalytic dom 100.0   5E-40 1.1E-44  334.6  26.3  260  115-376    11-281 (296)
273 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.9E-40 1.3E-44  330.7  26.3  250  118-368     5-274 (277)
274 cd06633 STKc_TAO3 Catalytic do 100.0 1.5E-39 3.2E-44  334.5  29.6  251  121-375    23-280 (313)
275 cd05089 PTKc_Tie1 Catalytic do 100.0 6.1E-40 1.3E-44  334.3  26.5  248  119-368     2-271 (297)
276 cd05613 STKc_MSK1_N N-terminal 100.0   8E-40 1.7E-44  331.7  27.1  260  120-379     1-279 (290)
277 cd08229 STKc_Nek7 Catalytic do 100.0 3.1E-40 6.8E-45  329.8  23.8  249  119-367     2-260 (267)
278 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.2E-40 4.7E-45  329.9  22.5  247  118-367     5-256 (261)
279 cd05060 PTKc_Syk_like Catalyti 100.0 7.9E-40 1.7E-44  325.7  26.1  241  125-367     1-250 (257)
280 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-39 2.7E-44  335.6  28.4  250  120-373    26-282 (317)
281 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-39 2.9E-44  324.8  27.6  246  118-367     5-256 (261)
282 cd05088 PTKc_Tie2 Catalytic do 100.0 5.3E-40 1.2E-44  336.1  25.3  249  118-368     6-276 (303)
283 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-39 2.5E-44  337.9  27.9  256  117-376     8-296 (328)
284 PF07714 Pkinase_Tyr:  Protein  100.0 4.5E-40 9.7E-45  329.1  23.9  245  122-367     2-257 (259)
285 KOG0614|consensus              100.0 2.6E-42 5.5E-47  354.1   7.7  270  112-382   413-691 (732)
286 cd05113 PTKc_Btk_Bmx Catalytic 100.0   1E-39 2.3E-44  325.3  26.4  247  118-368     3-254 (256)
287 cd08226 PK_STRAD_beta Pseudoki 100.0 3.5E-40 7.6E-45  341.2  23.7  251  125-375     4-315 (328)
288 cd05098 PTKc_FGFR1 Catalytic d 100.0   1E-39 2.3E-44  334.2  26.8  250  118-368    17-295 (307)
289 cd05059 PTKc_Tec_like Catalyti 100.0 8.6E-40 1.9E-44  325.5  25.4  246  119-368     4-254 (256)
290 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-39 2.3E-44  325.1  26.1  246  118-367     5-256 (261)
291 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-40 8.9E-45  332.3  23.2  250  118-368     4-279 (283)
292 cd05108 PTKc_EGFR Catalytic do 100.0 9.5E-40 2.1E-44  336.1  26.2  249  118-368     6-264 (316)
293 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-39 3.7E-44  327.4  27.5  248  118-367     6-263 (279)
294 cd06657 STKc_PAK4 Catalytic do 100.0 6.8E-40 1.5E-44  333.9  24.8  252  121-375    22-277 (292)
295 KOG1989|consensus              100.0 1.3E-40 2.8E-45  363.9  20.7  243  119-367    37-306 (738)
296 cd05051 PTKc_DDR Catalytic dom 100.0   1E-39 2.2E-44  331.4  25.9  249  118-367     4-292 (296)
297 cd05053 PTKc_FGFR Catalytic do 100.0   1E-39 2.2E-44  331.2  25.5  251  117-368    10-287 (293)
298 cd06634 STKc_TAO2 Catalytic do 100.0 1.5E-39 3.1E-44  333.7  26.2  252  119-374    15-273 (308)
299 cd05039 PTKc_Csk_like Catalyti 100.0 2.6E-39 5.7E-44  321.4  27.1  242  118-367     5-251 (256)
300 PRK13184 pknD serine/threonine 100.0 1.8E-39   4E-44  366.9  28.3  250  118-367     1-284 (932)
301 cd05066 PTKc_EphR_A Catalytic  100.0 2.5E-39 5.4E-44  324.1  26.0  249  118-367     3-261 (267)
302 cd05054 PTKc_VEGFR Catalytic d 100.0 8.1E-40 1.8E-44  340.4  23.3  249  119-368     7-329 (337)
303 cd05094 PTKc_TrkC Catalytic do 100.0 2.9E-39 6.2E-44  328.2  26.7  248  118-367     4-277 (291)
304 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.6E-39 7.8E-44  321.5  26.6  245  118-367     5-255 (260)
305 cd05082 PTKc_Csk Catalytic dom 100.0 2.8E-39   6E-44  321.5  25.6  241  118-367     5-251 (256)
306 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-39 2.5E-44  324.7  22.9  251  120-371     1-260 (260)
307 KOG4645|consensus              100.0 6.5E-42 1.4E-46  382.4   7.2  256  119-374  1235-1500(1509)
308 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.1E-39 8.9E-44  331.0  27.5  250  118-368    11-289 (314)
309 cd05045 PTKc_RET Catalytic dom 100.0 3.2E-39 6.9E-44  327.5  26.2  247  120-367     1-281 (290)
310 cd05092 PTKc_TrkA Catalytic do 100.0 3.1E-39 6.8E-44  326.1  26.0  247  119-367     5-276 (280)
311 cd05070 PTKc_Fyn_Yrk Catalytic 100.0   4E-39 8.7E-44  321.1  26.3  244  118-366     5-254 (260)
312 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.7E-39 5.8E-44  344.1  26.5  250  117-367    35-392 (400)
313 cd05610 STKc_MASTL Catalytic d 100.0 5.6E-39 1.2E-43  362.2  30.6  149  117-265     2-152 (669)
314 cd07830 STKc_MAK_like Catalyti 100.0   2E-39 4.2E-44  326.9  24.1  249  121-371     1-283 (283)
315 cd05071 PTKc_Src Catalytic dom 100.0 4.8E-39   1E-43  321.7  26.7  245  118-367     5-255 (262)
316 cd05055 PTKc_PDGFR Catalytic d 100.0 4.3E-39 9.4E-44  329.4  26.9  251  116-367    32-296 (302)
317 KOG0194|consensus              100.0 5.2E-40 1.1E-44  347.2  20.5  253  114-367   152-415 (474)
318 cd08216 PK_STRAD Pseudokinase  100.0 1.6E-39 3.4E-44  333.3  23.3  244  131-374    12-301 (314)
319 cd05115 PTKc_Zap-70 Catalytic  100.0 4.6E-39   1E-43  321.0  26.1  240  126-367     2-250 (257)
320 cd05034 PTKc_Src_like Catalyti 100.0 7.6E-39 1.7E-43  318.7  27.5  247  117-367     4-256 (261)
321 cd05583 STKc_MSK_N N-terminal  100.0 4.1E-39 8.8E-44  326.2  25.8  260  120-379     1-277 (288)
322 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.6E-39 1.2E-43  328.2  26.9  253  115-368    11-292 (304)
323 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.4E-39   2E-43  319.6  27.4  249  118-367     4-262 (268)
324 KOG0193|consensus              100.0 2.6E-40 5.7E-45  346.7  16.8  252  112-367   385-648 (678)
325 cd05065 PTKc_EphR_B Catalytic  100.0 8.3E-39 1.8E-43  320.5  26.2  249  118-367     3-263 (269)
326 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-38 2.6E-43  317.9  27.2  244  119-367     6-255 (260)
327 cd05111 PTK_HER3 Pseudokinase  100.0 9.1E-39   2E-43  322.8  26.6  248  118-367     6-263 (279)
328 cd05050 PTKc_Musk Catalytic do 100.0   7E-39 1.5E-43  324.4  25.8  249  118-367     4-284 (288)
329 KOG0666|consensus              100.0 7.7E-41 1.7E-45  326.2  10.6  258  117-374    22-343 (438)
330 smart00219 TyrKc Tyrosine kina 100.0 1.2E-38 2.5E-43  315.6  26.3  246  121-367     1-256 (258)
331 cd05040 PTKc_Ack_like Catalyti 100.0 7.8E-39 1.7E-43  317.9  25.1  241  125-367     1-253 (257)
332 cd05041 PTKc_Fes_like Catalyti 100.0 8.6E-39 1.9E-43  316.5  25.4  241  125-367     1-247 (251)
333 cd05047 PTKc_Tie Catalytic dom 100.0 7.2E-39 1.6E-43  321.6  25.0  240  126-367     2-263 (270)
334 cd05097 PTKc_DDR_like Catalyti 100.0 6.4E-39 1.4E-43  326.3  24.8  248  119-367     5-291 (295)
335 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-38 3.7E-43  314.2  26.9  242  125-368     1-247 (250)
336 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-38 2.3E-43  330.9  26.6  250  118-368    11-289 (334)
337 PHA02882 putative serine/threo 100.0 1.2E-38 2.6E-43  324.9  26.4  248  119-367    12-291 (294)
338 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-38   3E-43  320.7  26.5  249  118-367     5-271 (280)
339 cd05046 PTK_CCK4 Pseudokinase  100.0 1.3E-38 2.8E-43  319.8  25.9  249  119-368     5-272 (275)
340 cd05095 PTKc_DDR2 Catalytic do 100.0 1.1E-38 2.5E-43  324.6  25.8  248  119-367     5-292 (296)
341 cd05112 PTKc_Itk Catalytic dom 100.0 2.4E-38 5.1E-43  314.3  27.4  247  118-368     3-254 (256)
342 cd05576 STKc_RPK118_like Catal 100.0 3.6E-39 7.8E-44  318.1  20.8  228  130-371     4-237 (237)
343 cd05057 PTKc_EGFR_like Catalyt 100.0 2.5E-38 5.5E-43  318.9  27.1  247  119-367     7-263 (279)
344 KOG2345|consensus              100.0 2.7E-40 5.9E-45  314.1  11.9  251  116-368    18-296 (302)
345 cd05056 PTKc_FAK Catalytic dom 100.0 3.1E-38 6.7E-43  316.5  27.1  248  119-368     6-261 (270)
346 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.2E-38 4.8E-43  320.0  25.9  245  121-367     6-276 (283)
347 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.6E-39 7.8E-44  321.6  19.7  236  126-368     2-256 (258)
348 cd05107 PTKc_PDGFR_beta Cataly 100.0   2E-38 4.4E-43  337.4  26.6  252  116-368    34-395 (401)
349 KOG1187|consensus              100.0 4.3E-39 9.4E-44  336.5  20.2  257  108-367    64-347 (361)
350 cd05058 PTKc_Met_Ron Catalytic 100.0 4.3E-38 9.4E-43  313.5  25.8  243  125-368     1-255 (262)
351 cd05103 PTKc_VEGFR2 Catalytic  100.0 1.7E-38 3.7E-43  331.0  23.8  250  118-368     6-335 (343)
352 cd05073 PTKc_Hck Catalytic dom 100.0 8.9E-38 1.9E-42  311.7  27.6  246  117-367     4-255 (260)
353 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.3E-38 7.2E-43  319.1  24.8  248  120-368     5-279 (284)
354 cd05110 PTKc_HER4 Catalytic do 100.0 3.9E-38 8.5E-43  322.1  25.6  249  118-368     6-264 (303)
355 cd05083 PTKc_Chk Catalytic dom 100.0 4.4E-38 9.6E-43  312.5  25.1  240  118-367     5-249 (254)
356 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.4E-38 7.3E-43  315.9  24.4  236  126-368     2-260 (262)
357 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.7E-38 1.5E-42  316.4  26.4  247  119-367     4-278 (284)
358 cd05042 PTKc_Aatyk Catalytic d 100.0 4.7E-38   1E-42  315.0  24.9  240  126-367     2-265 (269)
359 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.8E-38   1E-42  315.1  24.3  248  121-368     1-268 (273)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.6E-38   1E-42  317.2  24.1  236  126-368     2-272 (274)
361 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.5E-38 9.7E-43  312.2  23.2  234  125-367     1-256 (259)
362 cd05044 PTKc_c-ros Catalytic d 100.0 4.6E-38   1E-42  314.5  23.2  241  126-367     2-265 (269)
363 KOG0695|consensus              100.0 3.5E-39 7.5E-44  316.8  14.4  267  114-380   245-528 (593)
364 KOG1026|consensus              100.0 7.4E-39 1.6E-43  348.7  18.0  247  119-366   486-756 (774)
365 cd08528 STKc_Nek10 Catalytic d 100.0 1.2E-37 2.6E-42  311.8  25.4  248  120-368     1-266 (269)
366 KOG0608|consensus              100.0 6.8E-39 1.5E-43  335.4  16.6  260  119-379   629-939 (1034)
367 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-37 2.9E-42  312.0  25.2  241  125-367     1-265 (269)
368 KOG0669|consensus              100.0 1.1E-40 2.4E-45  316.9   2.7  260  117-376    15-323 (376)
369 KOG0587|consensus              100.0 3.1E-38 6.8E-43  342.3  21.3  258  114-374    14-288 (953)
370 KOG1095|consensus              100.0 5.2E-38 1.1E-42  353.1  23.5  249  118-367   691-956 (1025)
371 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-37 2.7E-42  313.3  23.5  248  119-367     4-278 (284)
372 KOG1006|consensus              100.0 1.6E-39 3.6E-44  311.2   7.2  256  122-379    67-338 (361)
373 cd05086 PTKc_Aatyk2 Catalytic  100.0 5.4E-37 1.2E-41  307.8  25.6  240  126-367     2-264 (268)
374 KOG0671|consensus              100.0 9.1E-39   2E-43  319.9  10.0  254  115-374    85-412 (415)
375 KOG1151|consensus              100.0 1.8E-38 3.9E-43  321.0  11.5  259  117-375   461-748 (775)
376 KOG0665|consensus              100.0 1.6E-37 3.4E-42  304.7  14.5  253  116-372    14-314 (369)
377 smart00220 S_TKc Serine/Threon 100.0 4.4E-36 9.5E-41  292.4  24.3  239  131-371     1-244 (244)
378 KOG4250|consensus              100.0 2.3E-37 4.9E-42  330.2  14.3  240  119-360    13-296 (732)
379 KOG4257|consensus              100.0 1.8E-36 3.9E-41  317.0  16.1  242  123-366   393-643 (974)
380 PLN03225 Serine/threonine-prot 100.0 8.8E-36 1.9E-40  329.2  22.3  254  116-376   129-458 (566)
381 KOG0670|consensus              100.0 5.6E-37 1.2E-41  315.6  10.0  250  119-373   432-751 (752)
382 KOG4278|consensus              100.0 6.5E-36 1.4E-40  312.2  17.7  242  121-367   269-518 (1157)
383 KOG1290|consensus              100.0 2.9E-35 6.2E-40  301.8  21.0  253  119-377    78-559 (590)
384 KOG0196|consensus              100.0 3.3E-36 7.1E-41  322.4  14.0  265  103-368   604-887 (996)
385 KOG0199|consensus              100.0 1.3E-35 2.7E-40  314.1  15.4  253  119-373   110-373 (1039)
386 KOG0664|consensus              100.0 2.9E-37 6.2E-42  296.4   2.6  253  121-373    55-348 (449)
387 KOG1094|consensus              100.0 2.2E-35 4.8E-40  307.4  16.4  246  120-367   539-799 (807)
388 KOG0668|consensus              100.0 7.7E-36 1.7E-40  280.5  11.7  250  116-374    35-328 (338)
389 KOG0576|consensus              100.0 9.1E-37   2E-41  322.1   5.8  263  117-381    13-284 (829)
390 PLN03224 probable serine/threo 100.0 5.7E-34 1.2E-38  308.5  24.5  259  115-373   141-505 (507)
391 KOG1027|consensus              100.0 2.5E-35 5.3E-40  318.6  10.9  241  125-374   515-773 (903)
392 KOG0200|consensus              100.0 4.3E-33 9.3E-38  310.5  24.1  246  121-367   298-574 (609)
393 PLN00113 leucine-rich repeat r 100.0 2.1E-33 4.6E-38  330.3  20.3  236  119-368   690-947 (968)
394 KOG0984|consensus              100.0 1.5E-33 3.3E-38  261.6  13.8  211  121-333    48-269 (282)
395 KOG1152|consensus              100.0 8.8E-34 1.9E-38  295.4   9.3  202  116-319   558-771 (772)
396 KOG1025|consensus              100.0 6.1E-32 1.3E-36  290.5  15.8  244  121-366   698-951 (1177)
397 KOG3653|consensus              100.0 1.1E-31 2.4E-36  275.0  16.0  238  118-363   209-494 (534)
398 cd00180 PKc Catalytic domain o 100.0 2.2E-30 4.9E-35  245.3  23.9  211  127-369     1-215 (215)
399 KOG2052|consensus              100.0 5.4E-31 1.2E-35  268.2  17.2  240  118-365   210-496 (513)
400 smart00221 STYKc Protein kinas 100.0 1.4E-29   3E-34  244.8  23.3  212  121-333     1-218 (225)
401 PLN00181 protein SPA1-RELATED; 100.0 1.5E-31 3.4E-36  308.0  10.5  195  178-374    33-271 (793)
402 KOG1167|consensus              100.0 2.4E-31 5.2E-36  269.9  10.2  250  118-374    35-387 (418)
403 KOG1345|consensus              100.0 3.6E-30 7.9E-35  247.6   7.1  252  117-375    22-294 (378)
404 smart00750 KIND kinase non-cat 100.0 4.5E-29 9.9E-34  234.3  12.8  158  202-372     1-169 (176)
405 KOG1024|consensus              100.0 1.7E-28 3.6E-33  246.1  15.8  248  119-367   284-550 (563)
406 COG0515 SPS1 Serine/threonine   99.9 6.6E-26 1.4E-30  226.8  26.6  250  121-373     2-280 (384)
407 KOG0590|consensus               99.9 1.3E-28 2.7E-33  272.2   3.7  252  123-374   322-591 (601)
408 KOG1164|consensus               99.9 2.9E-25 6.2E-30  229.9  22.3  247  120-368    19-293 (322)
409 KOG0603|consensus               99.9 1.6E-27 3.5E-32  253.1   4.4  241  127-377     2-252 (612)
410 KOG1033|consensus               99.9 6.3E-27 1.4E-31  244.4   5.5  357    7-371    47-515 (516)
411 PRK09188 serine/threonine prot  99.9 1.2E-24 2.7E-29  226.7  16.9  176  115-301    14-210 (365)
412 KOG0606|consensus               99.9 1.2E-24 2.5E-29  241.3  12.8  274   66-382    35-329 (1205)
413 KOG1163|consensus               99.9 1.5E-23 3.2E-28  199.2  16.7  242  117-362    13-274 (341)
414 KOG1165|consensus               99.9 1.3E-22 2.9E-27  200.5  18.5  241  118-362    27-289 (449)
415 KOG1240|consensus               99.9 6.6E-24 1.4E-28  235.4   7.7  236  120-368    24-291 (1431)
416 cd05147 RIO1_euk RIO kinase fa  99.9 1.7E-22 3.7E-27  193.3  11.7  140  124-267     2-167 (190)
417 PF14531 Kinase-like:  Kinase-l  99.9 3.9E-22 8.4E-27  200.2  13.8  233  119-359    12-288 (288)
418 PRK10359 lipopolysaccharide co  99.9 4.9E-22 1.1E-26  193.9  12.9  170  119-311    31-216 (232)
419 cd05145 RIO1_like RIO kinase f  99.9 2.8E-21   6E-26  184.9  14.6  141  124-268     2-168 (190)
420 KOG4158|consensus               99.8 9.3E-21   2E-25  191.2  11.4  248  114-362   152-504 (598)
421 PRK12274 serine/threonine prot  99.8 1.1E-19 2.5E-24  174.1  16.0  186  122-320     5-210 (218)
422 KOG0195|consensus               99.8 7.9E-21 1.7E-25  183.3   6.7  238  119-365   190-439 (448)
423 PRK10345 hypothetical protein;  99.8 1.6E-19 3.5E-24  175.1  15.6  133  124-264     7-156 (210)
424 KOG1166|consensus               99.8 4.9E-19 1.1E-23  200.4  15.0  193  117-315   696-901 (974)
425 smart00090 RIO RIO-like kinase  99.8 5.7E-19 1.2E-23  174.8  11.9  143  121-268    30-199 (237)
426 KOG0590|consensus               99.8 1.3E-20 2.7E-25  208.7  -1.7  256  118-373    19-291 (601)
427 PRK14879 serine/threonine prot  99.8 3.5E-18 7.6E-23  165.4  15.3  135  125-266     2-143 (211)
428 KOG0601|consensus               99.8 2.1E-19 4.5E-24  191.5   7.2  357   10-372   115-518 (524)
429 KOG0576|consensus               99.8 9.2E-21   2E-25  201.4  -5.5  349    7-374    13-490 (829)
430 TIGR03724 arch_bud32 Kae1-asso  99.7 1.9E-17 4.1E-22  158.9  13.4  132  126-267     1-139 (199)
431 cd05144 RIO2_C RIO kinase fami  99.7 2.2E-17 4.7E-22  158.9  11.8  138  121-269    17-177 (198)
432 KOG1023|consensus               99.7 2.6E-17 5.7E-22  175.3  12.1  196  172-367     1-219 (484)
433 PRK09605 bifunctional UGMP fam  99.7 1.3E-16 2.8E-21  176.4  16.8  141  116-267   330-477 (535)
434 cd05119 RIO RIO kinase family,  99.7 2.2E-16 4.8E-21  149.8  12.1  137  124-268     2-165 (187)
435 KOG0601|consensus               99.7   7E-17 1.5E-21  172.2   5.9  254  119-374   114-385 (524)
436 KOG0606|consensus               99.7 4.1E-17 8.9E-22  181.8   4.0  270  114-383   799-1107(1205)
437 PRK01723 3-deoxy-D-manno-octul  99.6 3.4E-15 7.5E-20  148.0  15.0  135  125-266    37-191 (239)
438 cd05120 APH_ChoK_like Aminogly  99.6 1.7E-15 3.6E-20  136.6   9.8  131  123-266     2-138 (155)
439 KOG0595|consensus               99.6 8.8E-16 1.9E-20  156.4   6.4   93    5-97      6-99  (429)
440 KOG0600|consensus               99.5 2.9E-15 6.3E-20  155.9   3.5   93    7-99    115-209 (560)
441 KOG0659|consensus               99.5 8.8E-15 1.9E-19  141.6   5.1   90    8-97      1-90  (318)
442 KOG0593|consensus               99.5 7.3E-15 1.6E-19  144.4   4.3   86    8-93      1-86  (396)
443 KOG0597|consensus               99.5 8.7E-15 1.9E-19  153.8   4.5   90    8-97      1-90  (808)
444 KOG0591|consensus               99.5 2.7E-15 5.8E-20  146.1   0.4   92    6-97     16-110 (375)
445 KOG0598|consensus               99.5 1.7E-14 3.6E-19  145.7   4.8   87    6-92     22-109 (357)
446 KOG0605|consensus               99.5 4.3E-14 9.4E-19  148.3   5.2   87    6-92    138-225 (550)
447 KOG0575|consensus               99.4 1.4E-13   3E-18  146.6   7.2   88    9-96     18-107 (592)
448 KOG0615|consensus               99.4 1.9E-13   4E-18  139.5   6.4   84    9-92    172-260 (475)
449 KOG1243|consensus               99.4 3.7E-12 7.9E-17  137.6  16.4  169  137-313    30-199 (690)
450 KOG0661|consensus               99.4 3.4E-14 7.4E-19  147.1   0.7   91    6-97      7-99  (538)
451 KOG0662|consensus               99.4 9.2E-14   2E-18  127.4   3.3   90    8-97      1-90  (292)
452 KOG0663|consensus               99.4 1.1E-13 2.4E-18  137.8   3.1   91    7-97     74-166 (419)
453 TIGR01982 UbiB 2-polyprenylphe  99.4 2.3E-12   5E-17  138.7  13.5  139  125-269   123-309 (437)
454 KOG1266|consensus               99.4   5E-13 1.1E-17  133.0   7.2  200  171-374   120-337 (458)
455 PRK04750 ubiB putative ubiquin  99.4   5E-13 1.1E-17  145.9   7.0  144  118-269   119-316 (537)
456 KOG0611|consensus               99.4 1.4E-13 2.9E-18  139.8   1.8   83    9-91     53-136 (668)
457 cd05146 RIO3_euk RIO kinase fa  99.3 1.6E-11 3.5E-16  117.5  13.1  139  125-268     3-175 (197)
458 KOG0580|consensus               99.3 3.5E-13 7.6E-18  128.9   1.1   87    5-91     18-105 (281)
459 cd05151 ChoK Choline Kinase (C  99.3 8.5E-12 1.8E-16  116.1   9.9  126  124-265     3-135 (170)
460 KOG0616|consensus               99.3   2E-12 4.3E-17  127.1   4.2   87    6-92     41-128 (355)
461 KOG0581|consensus               99.3 4.8E-12   1E-16  128.1   5.6   90    7-97     77-168 (364)
462 KOG0594|consensus               99.3 2.3E-12 5.1E-17  129.9   3.0   90    8-97     10-106 (323)
463 KOG0694|consensus               99.2   1E-11 2.2E-16  134.1   7.3   88    5-92    364-453 (694)
464 KOG0660|consensus               99.2 5.3E-12 1.2E-16  127.3   4.6   91    7-97     20-115 (359)
465 KOG0585|consensus               99.2 8.6E-12 1.9E-16  129.4   5.6   86    6-91     94-193 (576)
466 KOG0032|consensus               99.2 1.6E-11 3.5E-16  129.4   6.6   84    8-91     34-119 (382)
467 cd07871 STKc_PCTAIRE3 Catalyti  99.2 2.9E-11 6.3E-16  122.6   7.8   90    6-96      2-91  (288)
468 cd05626 STKc_LATS2 Catalytic d  99.2 2.7E-11 5.8E-16  128.3   7.3   87    9-95      1-89  (381)
469 cd07848 STKc_CDKL5 Catalytic d  99.2 3.4E-11 7.4E-16  121.6   7.7   85    9-93      1-85  (287)
470 KOG0586|consensus               99.2 2.7E-11 5.8E-16  129.5   7.1  312    6-320    53-438 (596)
471 cd05599 STKc_NDR_like Catalyti  99.2 2.9E-11 6.2E-16  126.9   6.9   87    9-95      1-89  (364)
472 KOG0589|consensus               99.2 1.2E-11 2.6E-16  129.8   3.9   89    7-95      2-92  (426)
473 cd07869 STKc_PFTAIRE1 Catalyti  99.2 3.9E-11 8.5E-16  122.5   7.6   88    7-95      3-90  (303)
474 PTZ00263 protein kinase A cata  99.2 3.5E-11 7.6E-16  124.7   7.2   88    5-92     14-102 (329)
475 cd05629 STKc_NDR_like_fungal C  99.2 3.7E-11 8.1E-16  126.8   6.7   87    9-95      1-89  (377)
476 cd05612 STKc_PRKX_like Catalyt  99.2 4.3E-11 9.2E-16  121.7   6.7   83    9-91      1-84  (291)
477 cd05625 STKc_LATS1 Catalytic d  99.1 4.7E-11   1E-15  126.3   6.7   84    9-92      1-85  (382)
478 cd05598 STKc_LATS Catalytic do  99.1 4.8E-11   1E-15  125.9   6.8   87    9-95      1-89  (376)
479 cd05628 STKc_NDR1 Catalytic do  99.1 6.6E-11 1.4E-15  124.4   6.8   84    9-92      1-85  (363)
480 KOG0583|consensus               99.1 7.6E-11 1.6E-15  124.1   6.9   87    6-92     14-104 (370)
481 KOG0201|consensus               99.1 5.3E-11 1.1E-15  122.7   5.4   86    6-92     10-95  (467)
482 cd07859 STKc_TDY_MAPK_plant Ca  99.1 8.8E-11 1.9E-15  121.4   7.2   87   10-96      1-92  (338)
483 KOG1026|consensus               99.1 1.4E-11   3E-16  136.1   0.8   90    7-97    484-579 (774)
484 cd07872 STKc_PCTAIRE2 Catalyti  99.1 1.3E-10 2.8E-15  119.0   7.7   89    6-95      3-91  (309)
485 KOG0582|consensus               99.1 1.1E-10 2.4E-15  120.5   7.0   91    5-96     22-113 (516)
486 cd07853 STKc_NLK Catalytic dom  99.1 1.3E-10 2.9E-15  122.4   7.6   87   10-96      1-92  (372)
487 KOG4236|consensus               99.1 7.9E-11 1.7E-15  123.3   5.6   84   11-94    564-649 (888)
488 cd05600 STKc_Sid2p_Dbf2p Catal  99.1 1.1E-10 2.4E-15  120.9   6.8   88    9-96      1-90  (333)
489 KOG0577|consensus               99.1 4.9E-11 1.1E-15  126.3   4.1   90   10-99     27-117 (948)
490 KOG0192|consensus               99.1 6.8E-11 1.5E-15  123.8   5.2   88    8-97     40-130 (362)
491 KOG0690|consensus               99.1   3E-11 6.4E-16  120.0   2.1   87    6-92    165-252 (516)
492 cd07873 STKc_PCTAIRE1 Catalyti  99.1 1.7E-10 3.8E-15  117.5   7.9   89    6-95      3-91  (301)
493 cd07876 STKc_JNK2 Catalytic do  99.1 1.9E-10 4.1E-15  120.6   8.1   90    6-95     18-113 (359)
494 PF00069 Pkinase:  Protein kina  99.1 9.3E-11   2E-15  116.0   5.3   85   11-95      1-86  (260)
495 cd05573 STKc_ROCK_NDR_like Cat  99.1 1.4E-10   3E-15  120.8   6.7   83    9-91      1-84  (350)
496 cd05596 STKc_ROCK Catalytic do  99.1 1.3E-10 2.8E-15  122.6   6.4   92    4-95     38-131 (370)
497 cd05597 STKc_DMPK_like Catalyt  99.1 1.5E-10 3.4E-15  120.0   6.8   87    9-95      1-89  (331)
498 KOG1187|consensus               99.1 9.4E-11   2E-15  123.1   5.0   90    4-96     70-161 (361)
499 cd05621 STKc_ROCK2 Catalytic d  99.1 1.3E-10 2.8E-15  122.7   6.1   92    4-95     38-131 (370)
500 COG3642 Mn2+-dependent serine/  99.1 1.5E-09 3.3E-14  101.3  12.3  132  125-266     2-140 (204)

No 1  
>KOG0575|consensus
Probab=100.00  E-value=7.7e-58  Score=480.46  Aligned_cols=256  Identities=34%  Similarity=0.612  Sum_probs=244.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .+|...+.||+|||+.||.+++..+|+.||+|++.+.. ......+.+.+|++|.++|+|||||+++++|++.+++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            67999999999999999999999999999999998754 34455678899999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |+|. ++|..++++++.++|.+++.++.||+.||.|||++||||||||..|+||+++..|||||||+|..+..+.....+
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence            9998 799999999999999999999999999999999999999999999999999999999999999999877667788


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      .||||.|.|||++....+++.+||||+||++|-||+|++||...+..+++.+|+...+.+|..+|.++++||.+||++||
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P  257 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNP  257 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHhcCcccCcc
Q psy18060        357 SQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       357 ~~Rps~~elL~Hpw~~~~  374 (549)
                      .+|||+.+||.|+||+..
T Consensus       258 ~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  258 SERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             ccCCCHHHHhcCHhhhCC
Confidence            999999999999999543


No 2  
>KOG0598|consensus
Probab=100.00  E-value=3.1e-56  Score=445.37  Aligned_cols=269  Identities=33%  Similarity=0.541  Sum_probs=248.1

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ....++|++++.||+|+||+|++++.++|++.||+|++++.... .++.+....|..||..++||+||+++..|++.+.+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            45578999999999999999999999999999999999887643 34678899999999999999999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        194 VLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       194 ~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      |+|+||++| .|..+|++.+.|+|..++.++.+|+.||.|||++|||||||||+||||+.+|+++|+|||+++.......
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence            999999985 8999999999999999999999999999999999999999999999999999999999999987655555


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc-cCCHHHHHHHHHh
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-QVSETYKDLVKGL  351 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~-~~s~~~~dlI~~~  351 (549)
                      ...++|||+.|||||++.+.+|+.++|+||||+++|+|++|.+||.+.+....++.|..++...++ .++++++++++++
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~L  260 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKL  260 (357)
T ss_pred             ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHH
Confidence            667789999999999999999999999999999999999999999999999999999999855555 4999999999999


Q ss_pred             chhCcCCCC----CHHHHhcCcccCcccchhhhhcc
Q psy18060        352 LEKDASQRL----SWPELLHHPLVKDNLSSEIESQN  383 (549)
Q Consensus       352 L~~dP~~Rp----s~~elL~Hpw~~~~~~~~~~~~~  383 (549)
                      |++||.+|.    .+.+|.+||||.+..+..+....
T Consensus       261 L~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~  296 (357)
T KOG0598|consen  261 LKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKK  296 (357)
T ss_pred             hccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcC
Confidence            999999996    58999999999998887665443


No 3  
>KOG0581|consensus
Probab=100.00  E-value=5.8e-56  Score=443.57  Aligned_cols=257  Identities=29%  Similarity=0.519  Sum_probs=235.9

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-EEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-EFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~~~i  195 (549)
                      ...+.+.+..||+|..|+||+|.|+.|++.+|+|++. ....+...+.+.+|+++++..+||+||.+|+.|.... .++|
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI  155 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI  155 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence            3457788999999999999999999999999999993 4456677889999999999999999999999999988 5999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||+ |+|..+++..++++|.....++.++++||.|||+ ++||||||||+|||++.+|.|||||||.++.+...  .
T Consensus       156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--~  233 (364)
T KOG0581|consen  156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--I  233 (364)
T ss_pred             ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--h
Confidence            999999 6999999999999999999999999999999995 89999999999999999999999999999887654  5


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcC-CCCCCcc-CCHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV-----SILHLIRLLKTQ-DVTFPSQ-VSETYKD  346 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-----~~~~~~~~i~~~-~~~~p~~-~s~~~~d  346 (549)
                      .++++||..|||||.+.+..|+.++||||||++++||.+|+.||...     ...+++..|..+ ++.+|.. +|+++++
T Consensus       234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~  313 (364)
T KOG0581|consen  234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRS  313 (364)
T ss_pred             cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHH
Confidence            67889999999999999999999999999999999999999999874     677888888874 4567776 9999999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        347 LVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ||..||++||..|||+.|+++|||+++...
T Consensus       314 FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  314 FVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence            999999999999999999999999986544


No 4  
>KOG0615|consensus
Probab=100.00  E-value=1.3e-56  Score=451.12  Aligned_cols=258  Identities=33%  Similarity=0.535  Sum_probs=229.7

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-----HHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-----KELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      ..+.|.+.+.||+|+||.|-+|..++||+.||||++++.....     .....+.+|++||++|+|||||+++++|+..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            4567999999999999999999999999999999998765322     12345689999999999999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC---CcEEEeecccceec
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD---GVAMLCDFGFARSM  267 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~---g~vKL~DFGla~~~  267 (549)
                      ..||||||++ |+|.+.+-.++.+.|...+.+++|++.|+.|||++||+||||||+|||++.+   ..+||+|||+|+..
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS  329 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence            9999999998 5899999999999999999999999999999999999999999999999877   68999999999988


Q ss_pred             ccCcccccccCCCCcccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCC----cc
Q psy18060        268 AVGTHMLTSIKGTPLYMAPELIAERP---YDHTADLWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKTQDVTFP----SQ  339 (549)
Q Consensus       268 ~~~~~~~~~~~GT~~Y~APE~l~~~~---y~~ksDIwSlGvil~eLltG~~Pf~~~~~~-~~~~~i~~~~~~~p----~~  339 (549)
                      +.+ ....+.||||.|.|||++.+..   +..++|+|||||+||-+|+|.+||...... ...+.|..+.+.+-    ..
T Consensus       330 g~~-sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~  408 (475)
T KOG0615|consen  330 GEG-SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDR  408 (475)
T ss_pred             ccc-eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhh
Confidence            744 5668899999999999997654   345889999999999999999999876544 47788888877654    35


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      +|+++.+||++||..||++|||+.|+|+||||++..
T Consensus       409 Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  409 ISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            899999999999999999999999999999998653


No 5  
>KOG0597|consensus
Probab=100.00  E-value=3.9e-55  Score=453.05  Aligned_cols=257  Identities=52%  Similarity=0.873  Sum_probs=250.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      +++|.+.+.||+|+||.||||+.+.+.+.||+|.+.+...+.++...+.+|++|++.++|||||.|+++|++..++++|+
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            46788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        198 EFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       198 E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |||.|+|+.+|...+.++|+.++.++.|++.||.|||+.+|+|||+||.|||+...|.+|+||||+|+.+..++...++.
T Consensus        81 e~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsi  160 (808)
T KOG0597|consen   81 EYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSI  160 (808)
T ss_pred             hhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988889999


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcC
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      .|||.|||||...+++|+..+|+||||||+|||++|++||-..+..+..+.|...+...|+..|..+..|++.+|.+||.
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~  240 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPA  240 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCcccCcc
Q psy18060        358 QRLSWPELLHHPLVKDN  374 (549)
Q Consensus       358 ~Rps~~elL~Hpw~~~~  374 (549)
                      +|+||.+++.|||.+..
T Consensus       241 ~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  241 QRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             hcccHHHHhcChHHhhh
Confidence            99999999999999864


No 6  
>KOG0593|consensus
Probab=100.00  E-value=7.4e-55  Score=423.15  Aligned_cols=262  Identities=31%  Similarity=0.563  Sum_probs=234.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      +++|+.+..+|+|+||+|++|+++.||+.||||.+..+..++...+...+|+++|++++|||+|.++++|.....+++|+
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            46789999999999999999999999999999999887777777778899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |||+.++.+-|+.. ..+++..++.++.|++.|+.|||++++|||||||+||||+.+|.+||||||+|+....+....|.
T Consensus        81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTD  160 (396)
T KOG0593|consen   81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTD  160 (396)
T ss_pred             eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhh
Confidence            99999988888775 46999999999999999999999999999999999999999999999999999998866677889


Q ss_pred             cCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------CCC
Q psy18060        277 IKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-------------------VTF  336 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-------------------~~~  336 (549)
                      .+.|.||+|||.+.+ .+|+.++||||+||++.||++|.+.|++.+..+++..|...-                   +.+
T Consensus       161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l  240 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL  240 (396)
T ss_pred             hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence            999999999999987 889999999999999999999999999998777766654210                   112


Q ss_pred             C------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccchhh
Q psy18060        337 P------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       337 p------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      |            +.++.-+.||+++||..||.+|++.+|+|.||+|.+....+.
T Consensus       241 P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er~~  295 (396)
T KOG0593|consen  241 PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIEREL  295 (396)
T ss_pred             CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHHHH
Confidence            2            246778889999999999999999999999999966654433


No 7  
>KOG0616|consensus
Probab=100.00  E-value=1.1e-53  Score=414.36  Aligned_cols=265  Identities=29%  Similarity=0.510  Sum_probs=246.5

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..+++|++++.||.|+||.|.+++++.+|..||+|++++... .-+..+...+|..+|+.+.||+++++++.+.+.+.+|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            567889999999999999999999999999999999987542 3345678889999999999999999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||.+| .|..++++.++|++..++.++.||+.||+|||+++|++|||||+|||||++|.+||+|||+|+.....   
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r---  197 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR---  197 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---
Confidence            99999985 79999999999999999999999999999999999999999999999999999999999999987633   


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhch
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..+.||||.|+|||++...+|+.++|.|||||++|||+.|.+||...++..++++|..+.+.+|+.+++.+++||+++|+
T Consensus       198 T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~  277 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQ  277 (355)
T ss_pred             EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCcCCCC-----CHHHHhcCcccCcccchhhhhcc
Q psy18060        354 KDASQRL-----SWPELLHHPLVKDNLSSEIESQN  383 (549)
Q Consensus       354 ~dP~~Rp-----s~~elL~Hpw~~~~~~~~~~~~~  383 (549)
                      +|-.+|.     ...+|..||||++..+..+..+.
T Consensus       278 vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~  312 (355)
T KOG0616|consen  278 VDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRK  312 (355)
T ss_pred             hhhHhhhcCcCCCccccccCcccccccHHHHhhcc
Confidence            9999994     56899999999988777665443


No 8  
>KOG0592|consensus
Probab=100.00  E-value=2.6e-53  Score=439.68  Aligned_cols=266  Identities=31%  Similarity=0.539  Sum_probs=243.5

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNE  192 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~  192 (549)
                      .....+|.+++.||.|+|++|++|+.+.+++.||||++.+.-. ..+....+..|-..|.+| .||.|+++|..|++...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4467889999999999999999999999999999999976542 223345677888899999 89999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      +|+|+||++ |+|.++|.+.+.|++..++.++.||+.||+|||++|||||||||+||||+.+|++||+|||.|+.+.+..
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            999999998 7999999999999999999999999999999999999999999999999999999999999998775421


Q ss_pred             c-----------c--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc
Q psy18060        272 H-----------M--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS  338 (549)
Q Consensus       272 ~-----------~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~  338 (549)
                      .           .  ..+++||..|.+||++.....+..+|||+||||||.|+.|++||.+.+..-++++|....+.||+
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~  308 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE  308 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC
Confidence            1           1  15589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccchhhh
Q psy18060        339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       339 ~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~~~  380 (549)
                      .+++.+.+||+++|..||.+|+|++||.+||||.+..+..+-
T Consensus       309 ~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nlw  350 (604)
T KOG0592|consen  309 GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENLW  350 (604)
T ss_pred             CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhhh
Confidence            999999999999999999999999999999999987665543


No 9  
>KOG0595|consensus
Probab=100.00  E-value=8e-53  Score=424.30  Aligned_cols=259  Identities=36%  Similarity=0.637  Sum_probs=240.0

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ....+|.+.+.||+|+||+||+|+++.++..||||.+.+...+.+..+.+..|+.||+.++|||||+++++.+..+.+|+
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l   86 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL   86 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence            45678999999999999999999999999999999999887788889999999999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC------CcEEEeecccceecc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD------GVAMLCDFGFARSMA  268 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~------g~vKL~DFGla~~~~  268 (549)
                      |||||+ |+|..+|++++.++|..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||+|+.+.
T Consensus        87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence            999999 6999999999999999999999999999999999999999999999999875      468999999999987


Q ss_pred             cCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCccCCHHHH
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---FPSQVSETYK  345 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~  345 (549)
                      ++ ....+.||+|.|||||++..+.|+.|+|+||+|+|+|+|++|++||...+..+....+..+.-.   +|..+++...
T Consensus       167 ~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~  245 (429)
T KOG0595|consen  167 PG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLR  245 (429)
T ss_pred             ch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchh
Confidence            55 4567889999999999999999999999999999999999999999999999999888776533   3456788888


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      +++...|+++|..|.+..+.+.|+++....
T Consensus       246 ~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  246 ELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             hhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            999999999999999999999999997654


No 10 
>KOG0583|consensus
Probab=100.00  E-value=2e-51  Score=430.36  Aligned_cols=258  Identities=33%  Similarity=0.556  Sum_probs=237.9

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC---hHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCC
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS---GKELSSLKQECEIQKHLA-HPNIIKFIASHETLN  191 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~  191 (549)
                      ....+|.+.+.||+|+||+|+.|.+..++..||+|++.+....   ......+.+|+.+++.++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999999999999999987664221   134556778999999998 999999999999999


Q ss_pred             EEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceeccc
Q psy18060        192 EFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAV  269 (549)
Q Consensus       192 ~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~~  269 (549)
                      .+|+|||||.| +|.+++.+.++++|.+++.+++||+.|++|||++||+||||||+|||++.+ +.+||+|||++.....
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            99999999985 999999999999999999999999999999999999999999999999999 9999999999988743


Q ss_pred             CcccccccCCCCcccccccccCCC-CC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccC-CHHHHH
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERP-YD-HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQV-SETYKD  346 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~-y~-~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~-s~~~~d  346 (549)
                      ......+.|||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...+...|..+.+.+|..+ |+++++
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~  253 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARS  253 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHH
Confidence            335668889999999999999877 86 789999999999999999999999999999999999999999999 999999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        347 LVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      |+.+||..||.+|+|+.+|+.||||+.
T Consensus       254 Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  254 LIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999999999986


No 11 
>KOG0605|consensus
Probab=100.00  E-value=1.9e-51  Score=426.20  Aligned_cols=264  Identities=30%  Similarity=0.505  Sum_probs=237.7

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ...++|++++.||+|+||.||+|+.+.||..||+|++.++.. .......++.|-.+|....+|.||++|.+|++.+++|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            367899999999999999999999999999999999988763 4456788999999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc----
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV----  269 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~----  269 (549)
                      |||||++ |++..+|.+.+.|+|..+++++.+++.|++-||+.|+|||||||+|+|||..|++||+|||++.....    
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~  297 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRI  297 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhh
Confidence            9999988 58999999999999999999999999999999999999999999999999999999999999852210    


Q ss_pred             ------------------Cc-c------------------------cccccCCCCcccccccccCCCCCcchhhHHHHHH
Q psy18060        270 ------------------GT-H------------------------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCI  306 (549)
Q Consensus       270 ------------------~~-~------------------------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvi  306 (549)
                                        .. .                        ...+.+|||.|||||++.+.+|+..+|+||||||
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~I  377 (550)
T KOG0605|consen  298 ESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCI  377 (550)
T ss_pred             hhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHH
Confidence                              00 0                        0123579999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCc--cCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccchhh
Q psy18060        307 AYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS--QVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       307 l~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~  379 (549)
                      +||||.|.+||.+.++.++.++|....  +.+|.  .++++++|||.+||. ||.+|+.   ++||.+||||++..+..+
T Consensus       378 myEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l  456 (550)
T KOG0605|consen  378 MYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHL  456 (550)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchh
Confidence            999999999999999999999998776  56665  478999999999999 9999986   899999999998876655


Q ss_pred             h
Q psy18060        380 E  380 (549)
Q Consensus       380 ~  380 (549)
                      .
T Consensus       457 ~  457 (550)
T KOG0605|consen  457 R  457 (550)
T ss_pred             h
Confidence            3


No 12 
>KOG0591|consensus
Probab=100.00  E-value=2.4e-53  Score=409.03  Aligned_cols=255  Identities=35%  Similarity=0.566  Sum_probs=231.6

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEE-EEeeCC-
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA-SHETLN-  191 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~-~~~~~~-  191 (549)
                      ......+|++++.||+|+||.||++.+..+|..+|.|.+.-...+.+..+.+..|+.+|++|+|||||++++ .+...+ 
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            345567899999999999999999999999999999999866678888899999999999999999999998 454444 


Q ss_pred             EEEEEEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--CC--CccccccCCcEEEecCCcEEEeecc
Q psy18060        192 EFVLITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHS--NR--VLHRDLKPQNVLLNKDGVAMLCDFG  262 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~--~g--IiHrDIKP~NILl~~~g~vKL~DFG  262 (549)
                      .++||||+|+ |+|.+.|+.    ++.++|..++.++.|++.||..||+  .+  |+||||||.||||+.+|.|||+|||
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG  173 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG  173 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence            4899999998 799999864    4569999999999999999999999  44  9999999999999999999999999


Q ss_pred             cceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CC-ccC
Q psy18060        263 FARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-FP-SQV  340 (549)
Q Consensus       263 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-~p-~~~  340 (549)
                      +++.+...+....+.+|||+||+||.+...+|++|+||||+||++|||+.-++||.+.+..++.++|.+++.+ .| ..+
T Consensus       174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~Y  253 (375)
T KOG0591|consen  174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHY  253 (375)
T ss_pred             hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHh
Confidence            9999987777778899999999999999999999999999999999999999999999999999999999775 56 578


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      |..+..+|..|+.+||..||+.     +|++.+
T Consensus       254 S~~l~~li~~ci~vd~~~RP~t-----~~~v~d  281 (375)
T KOG0591|consen  254 STDLRELINMCIAVDPEQRPDT-----VPYVQD  281 (375)
T ss_pred             hhHHHHHHHHHccCCcccCCCc-----chHHHH
Confidence            9999999999999999999986     555544


No 13 
>KOG0588|consensus
Probab=100.00  E-value=8.5e-52  Score=436.09  Aligned_cols=262  Identities=29%  Similarity=0.515  Sum_probs=243.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecC-CCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ...+.-|++++.||.|+.|.|-.|++..||+.+|||++.+. ..+......+.+|+-||+.+.||||+++|+++++..++
T Consensus         8 ~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~l   87 (786)
T KOG0588|consen    8 KNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHL   87 (786)
T ss_pred             cccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceE
Confidence            34556689999999999999999999999999999999876 34444567889999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      |+|.||+. |.|++++..+++++|.+++.+++||+.|+.|||..+|+||||||+|+||+.++.+||+|||+|..-.++ .
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g-k  166 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG-K  166 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC-c
Confidence            99999988 579999999999999999999999999999999999999999999999999999999999999755444 5


Q ss_pred             cccccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHh
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ...+.||+|.|.|||++.+.+|+ .++||||+|||||.||||+.||.+.+...++.+++.+.+.+|..+|+++++||.+|
T Consensus       167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~m  246 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRM  246 (786)
T ss_pred             cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHH
Confidence            67888999999999999999985 78999999999999999999999999999999999999999999999999999999


Q ss_pred             chhCcCCCCCHHHHhcCcccCcccch
Q psy18060        352 LEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      |.+||.+|+|.+||++|||+......
T Consensus       247 l~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  247 LDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             hccCccccccHHHHhhCchhhcCCCC
Confidence            99999999999999999999876543


No 14 
>KOG0033|consensus
Probab=100.00  E-value=3e-52  Score=394.40  Aligned_cols=256  Identities=29%  Similarity=0.514  Sum_probs=236.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .+.|++.+.||+|.|+.|++|.+..||+.+|+|++.....+....+.+.+|++|-+.|+|||||++.+........|||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            35688899999999999999999999999999999776666667889999999999999999999999999999999999


Q ss_pred             ecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC---CcEEEeecccceecccCccc
Q psy18060        198 EFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD---GVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       198 E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~---g~vKL~DFGla~~~~~~~~~  273 (549)
                      |++.| +|..-|-++.-++|..+-..++||+.||.|+|.+||||||+||+|+++...   .-+||||||+|.... +...
T Consensus        90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-~g~~  168 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-DGEA  168 (355)
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-Cccc
Confidence            99986 788888888888999999999999999999999999999999999999654   369999999999888 4456


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc----cCCHHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKDLVK  349 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~dlI~  349 (549)
                      ...++|||.|||||++...+|+.++|||+.|||||-|+.|.+||.+.+...+++.|..+.+.+|+    .+++++++||+
T Consensus       169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvr  248 (355)
T KOG0033|consen  169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIR  248 (355)
T ss_pred             cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHH
Confidence            67889999999999999999999999999999999999999999999999999999999888774    68999999999


Q ss_pred             HhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        350 GLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       350 ~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +||..||.+|+|+.|.|+|||+++-
T Consensus       249 rML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  249 RMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             HHhccChhhhccHHHHhCCchhcch
Confidence            9999999999999999999999864


No 15 
>KOG0694|consensus
Probab=100.00  E-value=4.6e-50  Score=426.09  Aligned_cols=269  Identities=24%  Similarity=0.433  Sum_probs=245.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNE  192 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~  192 (549)
                      .-.+++|.++++||+|+||+|+++..+.+++.||||++++.. ....+.+....|.+|+... +||.+++++.+|++.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            456889999999999999999999999999999999998876 3455677888999998888 49999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        193 FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +|+||||+.|+-.-++.+.+.|+|..++.++..++.||+|||++|||+||||.+|||||.+|++||+|||+++..-....
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence            99999999863344445567899999999999999999999999999999999999999999999999999986553445


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhc
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ..+++||||.|||||++.++.|+.++|+|||||+|||||.|+.||.+.+..++...|....+.+|..+|.++.++++++|
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll  603 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLL  603 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHh
Confidence            66889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCcCCCCCH-----HHHhcCcccCcccchhhhhcc
Q psy18060        353 EKDASQRLSW-----PELLHHPLVKDNLSSEIESQN  383 (549)
Q Consensus       353 ~~dP~~Rps~-----~elL~Hpw~~~~~~~~~~~~~  383 (549)
                      .++|++|+.+     ++|..||||+...+..+....
T Consensus       604 ~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~  639 (694)
T KOG0694|consen  604 RKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRR  639 (694)
T ss_pred             ccCcccccCCCCCCchhhhhCCccccCCHHHHhhcc
Confidence            9999999975     789999999998887775543


No 16 
>KOG0661|consensus
Probab=100.00  E-value=1.2e-50  Score=414.21  Aligned_cols=259  Identities=29%  Similarity=0.465  Sum_probs=228.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCC-EEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLN-EFV  194 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~-~~~  194 (549)
                      .+++|.+++.||.|+||.||+|+.+.++..||||.+.+...+-++ ..-.+|++.|++++ ||||+++.+++.+.+ .+|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-CMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-HHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            467899999999999999999999999999999999776544333 34468999999998 999999999998877 999


Q ss_pred             EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||++.+|.++++.+ +.|+|..++.|+.||++||+|+|.+|+.|||+||+|||+..+..+||+|||+||..... ..
T Consensus        87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk-pP  165 (538)
T KOG0661|consen   87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK-PP  165 (538)
T ss_pred             eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC-CC
Confidence            99999999999999876 45999999999999999999999999999999999999998899999999999988654 46


Q ss_pred             ccccCCCCccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------C
Q psy18060        274 LTSIKGTPLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------D  333 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~  333 (549)
                      .|..+.|.||+|||++. .+.|+.++||||+|||++|+++-++.|+|.+..+.+.+|..-                   .
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn  245 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN  245 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence            78889999999999974 577999999999999999999999999999888887776420                   1


Q ss_pred             CCCC-----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        334 VTFP-----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       334 ~~~p-----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      +.+|           +++++++.++|.+||..||.+||||.|+|+||||+.....
T Consensus       246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS  300 (538)
T ss_pred             cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence            1222           2478999999999999999999999999999999865443


No 17 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00  E-value=5.9e-49  Score=407.44  Aligned_cols=264  Identities=30%  Similarity=0.493  Sum_probs=237.9

Q ss_pred             cccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       113 ~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      .+...+++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++...+
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN   91 (329)
T ss_pred             cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence            345567889999999999999999999999999999999975432 2233467889999999999999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      .+|+||||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            9999999987 589999999889999999999999999999999999999999999999999999999999999876432


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHH
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~  350 (549)
                         ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..+...+|..+++.+++||.+
T Consensus       172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  248 (329)
T PTZ00263        172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKG  248 (329)
T ss_pred             ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHH
Confidence               23457999999999999999999999999999999999999999999988888889888888899999999999999


Q ss_pred             hchhCcCCCCC-----HHHHhcCcccCcccchhh
Q psy18060        351 LLEKDASQRLS-----WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       351 ~L~~dP~~Rps-----~~elL~Hpw~~~~~~~~~  379 (549)
                      ||+.||.+||+     ++++++||||.+......
T Consensus       249 ~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~  282 (329)
T PTZ00263        249 LLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKL  282 (329)
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHH
Confidence            99999999997     799999999987554433


No 18 
>KOG0659|consensus
Probab=100.00  E-value=1.3e-49  Score=380.92  Aligned_cols=256  Identities=30%  Similarity=0.476  Sum_probs=227.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .+|...+.+|+|.||.||+|++..||+.||||.+..............+|++.|+.++||||+.++++|...+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            56888999999999999999999999999999998765444445567899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |++.+|...|+.+ ..++..+++.++.+++.||+|||++.|+||||||.|+|++.+|.+||+|||+|+...+.....+..
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~  161 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ  161 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc
Confidence            9999999999875 468999999999999999999999999999999999999999999999999999998776666666


Q ss_pred             CCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-----------C---------C
Q psy18060        278 KGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-----------T---------F  336 (549)
Q Consensus       278 ~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-----------~---------~  336 (549)
                      +-|.||+|||.+.| ..|+..+||||.|||+.||+-|.+-|++.+..+++..|...-.           .         +
T Consensus       162 V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~  241 (318)
T KOG0659|consen  162 VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF  241 (318)
T ss_pred             eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcC
Confidence            89999999999876 6799999999999999999999999999888777776632100           0         1


Q ss_pred             C--------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        337 P--------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       337 p--------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      |        +..++++.||+.+||..||.+|+|+.|+|+||||+..
T Consensus       242 P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  242 PKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             CCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence            1        1357788999999999999999999999999999863


No 19 
>KOG0600|consensus
Probab=100.00  E-value=8.8e-50  Score=410.50  Aligned_cols=256  Identities=31%  Similarity=0.466  Sum_probs=227.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFV  194 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~  194 (549)
                      ..+.|+.++.||+|.||.||+|++..+|+.||+|.+..............+||.||++|+||||+++.+.....  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            45679999999999999999999999999999999987665555666788999999999999999999987665  6899


Q ss_pred             EEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-c
Q psy18060        195 LITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-H  272 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-~  272 (549)
                      +|+||++.+|..++.. .-+|++.+++.++.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+...... .
T Consensus       195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~  274 (560)
T KOG0600|consen  195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA  274 (560)
T ss_pred             EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence            9999999999999887 4579999999999999999999999999999999999999999999999999999776543 3


Q ss_pred             cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------CCCCC----
Q psy18060        273 MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----------DVTFP----  337 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~----------~~~~p----  337 (549)
                      ..|+.+-|+||+|||.+.+ ..|+.++|+||+||||.||++|++.|++.+..+++..|..-          ...+|    
T Consensus       275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~  354 (560)
T KOG0600|consen  275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI  354 (560)
T ss_pred             ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence            4788899999999999877 57999999999999999999999999999988888776321          00122    


Q ss_pred             ---------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        338 ---------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       338 ---------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                                     ..+++.+.+|+..||..||.+|.||.++|+|+||+
T Consensus       355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence                           13688899999999999999999999999999994


No 20 
>KOG0198|consensus
Probab=100.00  E-value=1.5e-49  Score=402.49  Aligned_cols=257  Identities=33%  Similarity=0.588  Sum_probs=220.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC--EEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN--EFVL  195 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~--~~~i  195 (549)
                      ..+|...+.||+|+||.||++.+.++|...|||.+.....  ...+.+.+|+++|++++|||||++++......  .++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i   93 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI   93 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence            4568889999999999999999999999999999876522  22678999999999999999999999754443  6899


Q ss_pred             EEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeecccceeccc---
Q psy18060        196 ITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAV---  269 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~~~~---  269 (549)
                      .|||+. |+|.+++.+.+ +++|..++.+.+||+.||.|||++|||||||||+|||++. +|.+||+|||+++....   
T Consensus        94 ~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            999998 69999999877 7999999999999999999999999999999999999999 79999999999987653   


Q ss_pred             CcccccccCCCCcccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCC--CCCCccCCHHHH
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERP-YDHTADLWSLGCIAYEIHMGHPPFKT-VSILHLIRLLKTQD--VTFPSQVSETYK  345 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~-y~~ksDIwSlGvil~eLltG~~Pf~~-~~~~~~~~~i~~~~--~~~p~~~s~~~~  345 (549)
                      .........||+.|||||++..+. ...++|||||||++.||+||.+||.. ......+-.+....  +.+|+.+|++++
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~  253 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAK  253 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHH
Confidence            112234578999999999998632 33599999999999999999999987 44444444444333  568889999999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      +||.+|+.+||.+||||.++|+|||++....
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            9999999999999999999999999976543


No 21 
>KOG0580|consensus
Probab=100.00  E-value=5.1e-50  Score=378.77  Aligned_cols=259  Identities=33%  Similarity=0.550  Sum_probs=240.3

Q ss_pred             cccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       113 ~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      .....+++|++.+.||+|.||.||.|+.++++-.+|+|++.++.. .......+.+|+.|.+.|+||||+++|++|.+..
T Consensus        16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~   95 (281)
T KOG0580|consen   16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK   95 (281)
T ss_pred             ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence            356778999999999999999999999999999999999987653 2223467899999999999999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc
Q psy18060        192 EFVLITEFAH-MSLSNLLE--QRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA  268 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~--~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~  268 (549)
                      .+|+++||.. |.|.+.|.  ...++++..++.++.|++.||.|||..+||||||||+|+|++.+|.+||+|||.+-...
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            9999999987 78999998  56789999999999999999999999999999999999999999999999999985443


Q ss_pred             cCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHH
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLV  348 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI  348 (549)
                        .....+.|||..|.|||+..+..++.++|+|++|+++||++.|.+||...+..+.+++|...+..+|+.++.+++|+|
T Consensus       176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI  253 (281)
T KOG0580|consen  176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLI  253 (281)
T ss_pred             --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHH
Confidence              345678899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      .+||.++|.+|.+..|++.|||+..
T Consensus       254 ~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  254 SRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHHhccCccccccHHHHhhhHHHHh
Confidence            9999999999999999999999864


No 22 
>KOG0585|consensus
Probab=100.00  E-value=3.5e-49  Score=402.96  Aligned_cols=265  Identities=32%  Similarity=0.535  Sum_probs=228.7

Q ss_pred             ccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC------------hHHHHHHHHHHHHHHhcCCCC
Q psy18060        112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS------------GKELSSLKQECEIQKHLAHPN  179 (549)
Q Consensus       112 ~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~------------~~~~~~~~~Ei~il~~l~hpn  179 (549)
                      ......++.|++++.||+|.||.|-+|++..+++.||||++.+....            ....+.+.+|+.||+++.|||
T Consensus        90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n  169 (576)
T KOG0585|consen   90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN  169 (576)
T ss_pred             cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence            44566789999999999999999999999999999999999765421            112457899999999999999


Q ss_pred             eeEEEEEEee--CCEEEEEEecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcE
Q psy18060        180 IIKFIASHET--LNEFVLITEFAHMSLSNLLEQRKK-LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVA  256 (549)
Q Consensus       180 Iv~l~~~~~~--~~~~~iV~E~~~gsL~~~l~~~~~-l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~v  256 (549)
                      ||+++++..+  .+.+|||+|||...-..+.-..+. +++.++++++++++.||+|||.+|||||||||+|+||+.+|+|
T Consensus       170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             eeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcE
Confidence            9999999855  467999999998432333333444 9999999999999999999999999999999999999999999


Q ss_pred             EEeecccceecccC-----cccccccCCCCcccccccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy18060        257 MLCDFGFARSMAVG-----THMLTSIKGTPLYMAPELIAERP----YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIR  327 (549)
Q Consensus       257 KL~DFGla~~~~~~-----~~~~~~~~GT~~Y~APE~l~~~~----y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~  327 (549)
                      ||+|||.+.....+     .......+|||.|||||...++.    .+.+.||||+||+||+|+.|+.||.+....++..
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~  329 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD  329 (576)
T ss_pred             EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence            99999999766322     12234468999999999987632    3578999999999999999999999999999999


Q ss_pred             HHhcCCCCCCcc--CCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        328 LLKTQDVTFPSQ--VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       328 ~i~~~~~~~p~~--~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      +|...++.+|..  +.+.++|+|.+||++||.+|++..+|..|||......
T Consensus       330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence            999999999965  7999999999999999999999999999999987643


No 23 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=1.5e-48  Score=403.22  Aligned_cols=255  Identities=31%  Similarity=0.497  Sum_probs=229.5

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      +.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.++||||+++++++...+.+|+||||+. |
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999975432 23344567889999999999999999999999999999999998 5


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCc
Q psy18060        203 SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL  282 (549)
Q Consensus       203 sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~  282 (549)
                      +|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            89999998889999999999999999999999999999999999999999999999999998754333333455679999


Q ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC--
Q psy18060        283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL--  360 (549)
Q Consensus       283 Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp--  360 (549)
                      |+|||++.+..++.++|||||||++|||++|+.||...+.......+......+|..+++++.+||.+||+.||.+||  
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (323)
T cd05571         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG  240 (323)
T ss_pred             ccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCC
Confidence            999999999999999999999999999999999999999888888888888889999999999999999999999999  


Q ss_pred             ---CHHHHhcCcccCcccchhh
Q psy18060        361 ---SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       361 ---s~~elL~Hpw~~~~~~~~~  379 (549)
                         ++.++++||||....+...
T Consensus       241 ~~~~~~~ll~h~~f~~~~~~~~  262 (323)
T cd05571         241 GPEDAKEIMEHRFFASINWQDV  262 (323)
T ss_pred             CCCCHHHHHcCCCcCCCCHHHH
Confidence               8999999999987655444


No 24 
>KOG0660|consensus
Probab=100.00  E-value=3.6e-49  Score=393.32  Aligned_cols=261  Identities=30%  Similarity=0.490  Sum_probs=228.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-----CCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-----LNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~~  193 (549)
                      ..|..++.||+|+||.|+.+.++.+|+.||||.+.....+.-..+...+|+++++.++|+||+.+.+.+..     .+.+
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            45666899999999999999999999999999998766666677788999999999999999999998754     4579


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc--Cc
Q psy18060        194 VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV--GT  271 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~--~~  271 (549)
                      |+|+|+++.+|.+.|+.+..+++..+..++.||+.||+|+|+.||+||||||+|+|++.+..+||||||+|+....  ..
T Consensus       102 YiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  102 YLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             EEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence            9999999999999999998899999999999999999999999999999999999999999999999999998753  23


Q ss_pred             ccccccCCCCccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------
Q psy18060        272 HMLTSIKGTPLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------  332 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------  332 (549)
                      ...|..+.|.||+|||++. ...|+.++||||+|||+.||++|++.|++.+..+.+..|..-                  
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar  261 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR  261 (359)
T ss_pred             cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence            4457888999999999974 578999999999999999999999999998776666655321                  


Q ss_pred             -----CCCCC--------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccchhh
Q psy18060        333 -----DVTFP--------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       333 -----~~~~p--------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                           -+..|        ++.++.+.+|+.+||..||.+|+|++|+|.|||+.....+..
T Consensus       262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence                 01111        367899999999999999999999999999999987655444


No 25 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=1.9e-48  Score=396.28  Aligned_cols=256  Identities=29%  Similarity=0.480  Sum_probs=232.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            468999999999999999999999999999999975432 2234456889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+. |+|.+++..++.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....   ...
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~~  157 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TWT  157 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---ccc
Confidence            9987 589999999889999999999999999999999999999999999999999999999999999765432   234


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..+...+|..+++.++++|.+||+.||
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCH
Confidence            57999999999999989999999999999999999999999999988888888888888999999999999999999999


Q ss_pred             CCCCC-----HHHHhcCcccCcccch
Q psy18060        357 SQRLS-----WPELLHHPLVKDNLSS  377 (549)
Q Consensus       357 ~~Rps-----~~elL~Hpw~~~~~~~  377 (549)
                      .+||+     ++++++||||......
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~~~~~  263 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKSVDWD  263 (291)
T ss_pred             HHccCCccCCHHHHhcCccccCCCHH
Confidence            99995     9999999999865443


No 26 
>KOG0663|consensus
Probab=100.00  E-value=3.3e-49  Score=388.27  Aligned_cols=260  Identities=28%  Similarity=0.451  Sum_probs=227.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEE--eeCCE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASH--ETLNE  192 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~--~~~~~  192 (549)
                      ..+++.|+.+..|++|+||.||+|+++.|++.||+|+++-......-.-...+|+.+|.+.+|||||.+-.+.  .+-+.
T Consensus        72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~  151 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK  151 (419)
T ss_pred             cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence            4567889999999999999999999999999999999875432222122457899999999999999998875  44567


Q ss_pred             EEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        193 FVLITEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      +|||||||..+|..++...+ +|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||||||+||..+...
T Consensus       152 iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  152 IYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            99999999999999999876 89999999999999999999999999999999999999999999999999999998887


Q ss_pred             ccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------
Q psy18060        272 HMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------  332 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------  332 (549)
                      ...|..+-|.||+|||.+.+ ..|+.++|+||+|||+.||+++++.|++.+..+++.+|..-                  
T Consensus       232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~  311 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAV  311 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchh
Confidence            77888999999999999876 56999999999999999999999999999888887776321                  


Q ss_pred             -CCCCCc-------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        333 -DVTFPS-------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       333 -~~~~p~-------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                       ...+|+             .+++...+|++.+|..||.+|.||.|.|+|+||.+.
T Consensus       312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence             011111             156888999999999999999999999999999874


No 27 
>KOG0582|consensus
Probab=100.00  E-value=8.4e-48  Score=390.74  Aligned_cols=262  Identities=30%  Similarity=0.494  Sum_probs=229.9

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      .....+.|++.+.||.|..++||+|+...++..||||++.....+.. .+.+.+|++.++.++||||++++.+|..+..+
T Consensus        21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L   99 (516)
T KOG0582|consen   21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL   99 (516)
T ss_pred             CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence            34456889999999999999999999999999999999987665444 78999999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        194 VLITEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      |+||.|+. |++.++++..  ..++|..+..|+++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+..+...
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            99999998 7999999874  46999999999999999999999999999999999999999999999999987655433


Q ss_pred             ccc----ccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-------
Q psy18060        271 THM----LTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP-------  337 (549)
Q Consensus       271 ~~~----~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p-------  337 (549)
                      ...    .+++.|||+|||||++..  ..|++|+||||||++..||.+|..||...++...+-.-.++.++.|       
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~  259 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK  259 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence            221    156789999999999643  6799999999999999999999999999988877655445544322       


Q ss_pred             ---ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        338 ---SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       338 ---~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                         ..++..++.+|..||++||.+|||+.++|+|+||+....
T Consensus       260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence               246788999999999999999999999999999987543


No 28 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00  E-value=7.2e-48  Score=396.09  Aligned_cols=251  Identities=31%  Similarity=0.516  Sum_probs=226.8

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+.+++.++||||+++++++...+.+|+||||+. |+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999999999999999997542 233345677889999999999999999999999999999999998 589


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCccc
Q psy18060        205 SNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYM  284 (549)
Q Consensus       205 ~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~  284 (549)
                      .+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............+||+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence            99999888999999999999999999999999999999999999999999999999999976443333345567999999


Q ss_pred             ccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC---C
Q psy18060        285 APELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL---S  361 (549)
Q Consensus       285 APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp---s  361 (549)
                      |||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++++||.+||+.||.+||   +
T Consensus       161 aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~  240 (312)
T cd05585         161 APELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNG  240 (312)
T ss_pred             CHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCC
Confidence            9999999999999999999999999999999999999888888888888889999999999999999999999997   5


Q ss_pred             HHHHhcCcccCcccch
Q psy18060        362 WPELLHHPLVKDNLSS  377 (549)
Q Consensus       362 ~~elL~Hpw~~~~~~~  377 (549)
                      +.|+++||||.+....
T Consensus       241 ~~e~l~hp~~~~~~~~  256 (312)
T cd05585         241 AQEIKNHPFFSQLSWK  256 (312)
T ss_pred             HHHHHcCCCcCCCCHH
Confidence            7999999999876443


No 29 
>KOG0578|consensus
Probab=100.00  E-value=7.3e-49  Score=409.75  Aligned_cols=255  Identities=32%  Similarity=0.568  Sum_probs=231.7

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      -...|.....||+|+.|.||.+....+++.||||.+.......+  +.+.+|+.+|+..+|||||++++.|--.+.+|+|
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k--eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV  348 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK--ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV  348 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch--hhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence            34678888999999999999999999999999999987655443  5689999999999999999999999888999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++ |+|.+.+... .++|.+++.|++++++||+|||.+||+|||||.+|||++.+|.+||+|||++..+........
T Consensus       349 MEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~  427 (550)
T KOG0578|consen  349 MEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS  427 (550)
T ss_pred             EeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc
Confidence            99998 5788887654 599999999999999999999999999999999999999999999999999988877766778


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHhc
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---VTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dlI~~~L  352 (549)
                      +.+|||+|||||+.....|++++||||||++++||+-|++||-..++...+.+|.+..   +..|..+|+.+++|+.+||
T Consensus       428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL  507 (550)
T KOG0578|consen  428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCL  507 (550)
T ss_pred             cccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHh
Confidence            8899999999999999999999999999999999999999999888877777776543   3466789999999999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCcc
Q psy18060        353 EKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +.||.+|++|.|||+||||+..
T Consensus       508 ~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  508 VVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             hcchhcCCCHHHHhcChhhhhc
Confidence            9999999999999999999543


No 30 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00  E-value=2.5e-47  Score=387.30  Aligned_cols=254  Identities=30%  Similarity=0.458  Sum_probs=217.0

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      .+++|++.+.||.|+||.||+|.+..++..||+|.+...... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            457899999999999999999999999999999998654322 2234567899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++..........
T Consensus        82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~  161 (288)
T cd07871          82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYS  161 (288)
T ss_pred             EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcccc
Confidence            9999999999987654 579999999999999999999999999999999999999999999999999976544333344


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------CC
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-------------------VT  335 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-------------------~~  335 (549)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+....                   ..
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd07871         162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYL  241 (288)
T ss_pred             CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccc
Confidence            5678999999999865 568999999999999999999999998877665554432110                   00


Q ss_pred             C-----------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 F-----------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 ~-----------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +           .+.+++++++||.+||+.||.+|||++|+++||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         242 FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            1           12467899999999999999999999999999997


No 31 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00  E-value=1.7e-47  Score=398.62  Aligned_cols=262  Identities=29%  Similarity=0.459  Sum_probs=234.3

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCC-ceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLK-KTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~-~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      .....++|++.+.||+|+||.||+|.+..++ ..||+|.+.+... .......+.+|+.+++.++||||+++++++...+
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            3345678999999999999999999876654 6899999875432 2334567789999999999999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      .+|+||||+. |+|.+++..++.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            9999999997 689999999889999999999999999999999999999999999999999999999999999876432


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHH
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~  350 (549)
                         ..+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+..+...+|..+++.++++|++
T Consensus       185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  261 (340)
T PTZ00426        185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKK  261 (340)
T ss_pred             ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence               24567999999999999988999999999999999999999999999988888888888888899999999999999


Q ss_pred             hchhCcCCCC-----CHHHHhcCcccCcccchh
Q psy18060        351 LLEKDASQRL-----SWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       351 ~L~~dP~~Rp-----s~~elL~Hpw~~~~~~~~  378 (549)
                      ||+.||.+|+     |++++++||||.+..+..
T Consensus       262 ~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~  294 (340)
T PTZ00426        262 LLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVS  294 (340)
T ss_pred             HcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            9999999995     899999999998765443


No 32 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=2.1e-47  Score=395.73  Aligned_cols=255  Identities=30%  Similarity=0.507  Sum_probs=228.3

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      +.||+|+||.||++.+..+++.||+|++.+... .......+.+|+++++.++||||+++++++...+.+++||||+. |
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999975432 23345677889999999999999999999999999999999997 5


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCc
Q psy18060        203 SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL  282 (549)
Q Consensus       203 sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~  282 (549)
                      +|..++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            89999988888999999999999999999999999999999999999999999999999998754333233345679999


Q ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC--
Q psy18060        283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL--  360 (549)
Q Consensus       283 Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp--  360 (549)
                      |+|||++.+..++.++|||||||++|+|++|+.||...+.......+......+|..+++++.+||.+||++||.+||  
T Consensus       161 y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (328)
T cd05593         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGG  240 (328)
T ss_pred             ccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence            999999999899999999999999999999999999988888888888888889999999999999999999999997  


Q ss_pred             ---CHHHHhcCcccCcccchhh
Q psy18060        361 ---SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       361 ---s~~elL~Hpw~~~~~~~~~  379 (549)
                         ++.|+++||||.+......
T Consensus       241 ~~~~~~~il~h~~~~~~~~~~~  262 (328)
T cd05593         241 GPDDAKEIMRHSFFTGVNWQDV  262 (328)
T ss_pred             CCCCHHHHhcCCCcCCCCHHHH
Confidence               8999999999987654433


No 33 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=3.6e-47  Score=393.12  Aligned_cols=254  Identities=29%  Similarity=0.491  Sum_probs=227.6

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      +.||+|+||.||++.+..+|+.||+|++.... ........+.+|+++++.++||||+++++++...+.+|+||||+. |
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            46999999999999999999999999997542 223345567789999999999999999999999999999999998 5


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCc
Q psy18060        203 SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL  282 (549)
Q Consensus       203 sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~  282 (549)
                      +|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.............||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            89999988889999999999999999999999999999999999999999999999999998754333333345679999


Q ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC--
Q psy18060        283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL--  360 (549)
Q Consensus       283 Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp--  360 (549)
                      |+|||++.+..++.++|||||||++|+|++|+.||...+.......+......+|..+++++.++|.+||..||.+||  
T Consensus       161 y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  240 (323)
T cd05595         161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG  240 (323)
T ss_pred             cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCC
Confidence            999999999999999999999999999999999999998888888888888888999999999999999999999998  


Q ss_pred             ---CHHHHhcCcccCcccchh
Q psy18060        361 ---SWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       361 ---s~~elL~Hpw~~~~~~~~  378 (549)
                         ++.++++||||....+..
T Consensus       241 ~~~~~~~~l~h~~~~~~~~~~  261 (323)
T cd05595         241 GPSDAKEVMEHRFFLSINWQD  261 (323)
T ss_pred             CCCCHHHHHcCCCcCCCCHHH
Confidence               899999999998765443


No 34 
>KOG0032|consensus
Probab=100.00  E-value=7e-47  Score=396.30  Aligned_cols=259  Identities=34%  Similarity=0.575  Sum_probs=235.6

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-HHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCC
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLA-HPNIIKFIASHETLN  191 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~  191 (549)
                      .......|++.+.||+|.||.||+|+.+.||+.+|+|.+.+..... .....+.+|++||+++. |||||.++++|++.+
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~  109 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD  109 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence            3445567999999999999999999999999999999998765432 24568899999999998 999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC----CcEEEeeccccee
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD----GVAMLCDFGFARS  266 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~----g~vKL~DFGla~~  266 (549)
                      .+++|||+|. |.|.+.|... .++|..+..++.|++.|++|||+.||+||||||+|+|+...    +.+|++|||+|..
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~  188 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF  188 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence            9999999998 5899999877 59999999999999999999999999999999999999643    4799999999998


Q ss_pred             cccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----ccCCH
Q psy18060        267 MAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSE  342 (549)
Q Consensus       267 ~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~  342 (549)
                      ... .......+||+.|+|||++...+|+..+||||+||++|.|++|.+||.+.+.......+..+.+.++    +.++.
T Consensus       189 ~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~  267 (382)
T KOG0032|consen  189 IKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE  267 (382)
T ss_pred             ccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence            876 4566788999999999999999999999999999999999999999999999998889998877665    46799


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+++||++||..||.+|+|+.++|+|||++..
T Consensus       268 ~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  268 SAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            99999999999999999999999999998754


No 35 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00  E-value=9.4e-47  Score=382.49  Aligned_cols=261  Identities=26%  Similarity=0.410  Sum_probs=224.2

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|+..+.||+|+||.||+|.+..+++.||+|.+.+.... ......+.+|+.+++.++||||+++++++...+.+++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            378899999999999999999999999999998754322 2233457789999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |+. |+|..++...  ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~  159 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE-TVR  159 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-eec
Confidence            997 5898887643  468999999999999999999999999999999999999999999999999998754332 234


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCCCCccCCHHHHHHHHHh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI----LHLIRLLKTQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||.....    ......+......++..+++++.+||.+|
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  239 (285)
T cd05631         160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRML  239 (285)
T ss_pred             CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHH
Confidence            55799999999999999999999999999999999999999987543    23334444555667788999999999999


Q ss_pred             chhCcCCCCC-----HHHHhcCcccCcccchhhhh
Q psy18060        352 LEKDASQRLS-----WPELLHHPLVKDNLSSEIES  381 (549)
Q Consensus       352 L~~dP~~Rps-----~~elL~Hpw~~~~~~~~~~~  381 (549)
                      |+.||.+||+     ++++++||||.+.....+..
T Consensus       240 l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~  274 (285)
T cd05631         240 LTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEA  274 (285)
T ss_pred             hhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHh
Confidence            9999999997     89999999999876655543


No 36 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00  E-value=5e-47  Score=392.52  Aligned_cols=257  Identities=30%  Similarity=0.473  Sum_probs=214.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC-----CEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL-----NEFV  194 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~~~  194 (549)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++...     ..+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            58999999999999999999999999999999875433333445678999999999999999999887433     3589


Q ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc---
Q psy18060        195 LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT---  271 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~---  271 (549)
                      +||||++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......   
T Consensus        81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  160 (338)
T cd07859          81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA  160 (338)
T ss_pred             EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc
Confidence            99999999999999988899999999999999999999999999999999999999999999999999997643221   


Q ss_pred             ccccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc------------------
Q psy18060        272 HMLTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT------------------  331 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~------------------  331 (549)
                      .......||+.|+|||++.+  ..++.++|||||||++|+|++|++||.+.+.......+..                  
T Consensus       161 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  240 (338)
T cd07859         161 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKA  240 (338)
T ss_pred             ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhH
Confidence            12244579999999999865  6789999999999999999999999987654433221110                  


Q ss_pred             ---------C-CCCC---CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        332 ---------Q-DVTF---PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       332 ---------~-~~~~---p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                               . ...+   .+.+++.+.++|.+||+.||.+|||+.|+++||||++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         241 RRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence                     0 0000   0246788999999999999999999999999999976433


No 37 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00  E-value=1.2e-46  Score=388.98  Aligned_cols=260  Identities=27%  Similarity=0.500  Sum_probs=230.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCC-CeeEEEEEEeeCCEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHP-NIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hp-nIv~l~~~~~~~~~~~iV~  197 (549)
                      +|++++.||+|+||.||+|.+..+++.||+|++.+... .......+..|..++..+.|+ +|+++++++...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            48899999999999999999999999999999975422 223456678899999999765 5888999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+. |+|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...........
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence            9997 589999998889999999999999999999999999999999999999999999999999998754333333445


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+++.+||.+||
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P  240 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHP  240 (324)
T ss_pred             ecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCH
Confidence            67999999999999999999999999999999999999999999988888888888888899999999999999999999


Q ss_pred             CCCCCH-----HHHhcCcccCcccchhh
Q psy18060        357 SQRLSW-----PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       357 ~~Rps~-----~elL~Hpw~~~~~~~~~  379 (549)
                      .+|+++     +++++||||........
T Consensus       241 ~~R~~~~~~~~~~~~~hp~~~~~~~~~~  268 (324)
T cd05587         241 AKRLGCGPTGERDIREHAFFRRIDWEKL  268 (324)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence            999986     89999999987655443


No 38 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00  E-value=7.8e-47  Score=386.20  Aligned_cols=257  Identities=28%  Similarity=0.426  Sum_probs=214.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            357899999999999999999999999999999998754322 2223567899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++++|.+++..+ +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++..........
T Consensus        82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            999999999888764 5689999999999999999999999999999999999999999999999999976543333345


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhc---CC-----------------
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSI-LHLIRLLKT---QD-----------------  333 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~~~~~~i~~---~~-----------------  333 (549)
                      ...||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+... ...+..+..   .+                 
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            5678999999999865 4588999999999999999999999987532 222222210   00                 


Q ss_pred             -C--CCCc---------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        334 -V--TFPS---------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       334 -~--~~p~---------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                       .  ..|.         ..++.+++||.+||+.||.+|||+.|+++||||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence             0  0010         245788999999999999999999999999999864


No 39 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00  E-value=7.9e-47  Score=390.21  Aligned_cols=261  Identities=25%  Similarity=0.469  Sum_probs=231.2

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      +|.+.+.||+|+||.||+|.+..+++.||+|++.+... ..........|..++..+ .||+|+++++++...+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            48899999999999999999999999999999976432 222344566777887776 6899999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++ |+|.+.+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence            9997 689999988889999999999999999999999999999999999999999999999999999765433333456


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      .+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+++.+||++||
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p  240 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP  240 (323)
T ss_pred             CCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCH
Confidence            68999999999999999999999999999999999999999999998888888888888999999999999999999999


Q ss_pred             CCCCCH-----HHHhcCcccCcccchhhh
Q psy18060        357 SQRLSW-----PELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       357 ~~Rps~-----~elL~Hpw~~~~~~~~~~  380 (549)
                      .+|+++     .++++||||+...+....
T Consensus       241 ~~R~~~~~~~~~~i~~h~~~~~~~~~~~~  269 (323)
T cd05616         241 GKRLGCGPEGERDIKEHAFFRYIDWEKLE  269 (323)
T ss_pred             HhcCCCCCCCHHHHhcCCCcCCCCHHHHH
Confidence            999984     899999999876554443


No 40 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00  E-value=5.1e-47  Score=391.42  Aligned_cols=255  Identities=27%  Similarity=0.494  Sum_probs=227.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.++.+++.||+|++.+... .......+..|..++..+ +||||+++++++...+.+|+||||++ 
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999875321 223345667788888776 69999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.+...+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.............||+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            58999999888999999999999999999999999999999999999999999999999999876443333345567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.++|.+||+.||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~  240 (320)
T cd05590         161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLG  240 (320)
T ss_pred             cccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCC
Confidence            99999999999999999999999999999999999999999998998988888888899999999999999999999999


Q ss_pred             H------HHHhcCcccCcccchhh
Q psy18060        362 W------PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~------~elL~Hpw~~~~~~~~~  379 (549)
                      +      +++++||||....+...
T Consensus       241 ~~~~~~~~~~~~h~~f~~~~~~~~  264 (320)
T cd05590         241 SLTLGGEEAILRHPFFKELDWEKL  264 (320)
T ss_pred             CCCCCCHHHHHcCCCcCCCCHHHH
Confidence            8      99999999987655443


No 41 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=100.00  E-value=6.3e-47  Score=382.86  Aligned_cols=253  Identities=29%  Similarity=0.532  Sum_probs=215.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||+|.++.+++.||+|++............+.+|+.+++.++||||+++++++...+.+++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            36999999999999999999999999999999997654444445677899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cccc
Q psy18060        199 FAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-MLTS  276 (549)
Q Consensus       199 ~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~~~  276 (549)
                      |+.+++.+.+.. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++....... ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            999766555544 45799999999999999999999999999999999999999999999999999987643221 2234


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------CCC-
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-------------------VTF-  336 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-------------------~~~-  336 (549)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+.......+....                   ..+ 
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07848         161 YVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP  240 (287)
T ss_pred             cccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccC
Confidence            579999999999998889999999999999999999999998876544333222110                   001 


Q ss_pred             ------------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        337 ------------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       337 ------------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                  +..+|+++.+||.+||++||.+|||++|+|+||||
T Consensus       241 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         241 AVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                        12368889999999999999999999999999997


No 42 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=1.2e-46  Score=395.37  Aligned_cols=260  Identities=27%  Similarity=0.443  Sum_probs=224.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++++.||+|+||+||+|.+..+++.||+|++.+... .......+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            468999999999999999999999999999999975432 2233467788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-----  271 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-----  271 (549)
                      ||+. |+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++......     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            9997 5899999988899999999999999999999999999999999999999999999999999987543210     


Q ss_pred             ------------------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q psy18060        272 ------------------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS  321 (549)
Q Consensus       272 ------------------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~  321 (549)
                                                    ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence                                          01124579999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHhcC--CCCCCc--cCCHHHHHHHHHhchhCcC---CCCCHHHHhcCcccCcccchhh
Q psy18060        322 ILHLIRLLKTQ--DVTFPS--QVSETYKDLVKGLLEKDAS---QRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       322 ~~~~~~~i~~~--~~~~p~--~~s~~~~dlI~~~L~~dP~---~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      .......+...  ...+|+  .++++++++|.+|+. +|.   .||+++||++||||++..+..+
T Consensus       241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~  304 (363)
T cd05628         241 PQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHI  304 (363)
T ss_pred             HHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHH
Confidence            88888777653  344554  478999999999765 444   5689999999999998765554


No 43 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00  E-value=8.4e-47  Score=389.14  Aligned_cols=254  Identities=25%  Similarity=0.454  Sum_probs=224.1

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+|+.||+|.+.+... ..........|..++..+ +||||+++++++...+.+|+||||+. 
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            469999999999999999999999999975321 122344566777777654 89999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.....+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.........+..+||+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence            58999998888999999999999999999999999999999999999999999999999999875433333445678999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+.....+.+......+|..++++++++|.+||+.||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~  240 (316)
T cd05620         161 DYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLG  240 (316)
T ss_pred             CccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence            99999999999999999999999999999999999999988888888887777888889999999999999999999999


Q ss_pred             H-HHHhcCcccCcccchh
Q psy18060        362 W-PELLHHPLVKDNLSSE  378 (549)
Q Consensus       362 ~-~elL~Hpw~~~~~~~~  378 (549)
                      + +++++||||.......
T Consensus       241 ~~~~~~~h~~f~~~~~~~  258 (316)
T cd05620         241 VVGNIRGHPFFKTINWTA  258 (316)
T ss_pred             ChHHHHcCCCcCCCCHHH
Confidence            8 5899999998765443


No 44 
>KOG0611|consensus
Probab=100.00  E-value=5.4e-48  Score=386.56  Aligned_cols=256  Identities=29%  Similarity=0.507  Sum_probs=236.6

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..-.+|++.+.||+|.||+|-+|.....|+.||||.+.+... +....-.+++|++||+.|+||||+++|++|++.+.+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            345779999999999999999999999999999999988764 4455678899999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      |||||.. |.|.+++..++.++|.+++.+++||+.|+.|||+++++|||||.+|||+|+++.+||+|||++..+... ..
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-kf  208 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-KF  208 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc-cH
Confidence            9999987 689999999999999999999999999999999999999999999999999999999999999877654 56


Q ss_pred             ccccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhc
Q psy18060        274 LTSIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L  352 (549)
                      .+++||+|.|.+||++.+.+|. +.+|-|||||+||-|..|.+||.+.+...+++.|..+.+.-|.. |..+.-||+.||
T Consensus       209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~-PSdA~gLIRwmL  287 (668)
T KOG0611|consen  209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET-PSDASGLIRWML  287 (668)
T ss_pred             HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC-CchHHHHHHHHH
Confidence            7899999999999999999985 67999999999999999999999999999999999988765544 667889999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCc
Q psy18060        353 EKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      .+||.+|.|+++|..|=|+.=
T Consensus       288 mVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  288 MVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             hcCcccchhHHHHhhhheeec
Confidence            999999999999999999863


No 45 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00  E-value=4.3e-47  Score=392.53  Aligned_cols=253  Identities=30%  Similarity=0.502  Sum_probs=226.9

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      +.||+|+||.||++.+..+++.||+|++.+... .......+.+|+++++.++||||+++++++...+.+|+||||+. |
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999999999999999999975432 22344567789999999999999999999999999999999998 5


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        203 SLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       203 sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      +|..++...+.+++..+..++.||+.||.|||+ .||+||||||+|||++.+|.+||+|||+++.............||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            899999888899999999999999999999997 7999999999999999999999999999876433333344567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC-
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL-  360 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp-  360 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+||.+||++||.+|+ 
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  240 (325)
T cd05594         161 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLG  240 (325)
T ss_pred             ccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCC
Confidence            9999999999999999999999999999999999999998888888888888889999999999999999999999997 


Q ss_pred             ----CHHHHhcCcccCcccch
Q psy18060        361 ----SWPELLHHPLVKDNLSS  377 (549)
Q Consensus       361 ----s~~elL~Hpw~~~~~~~  377 (549)
                          ++.++++||||.+....
T Consensus       241 ~~~~~~~~il~h~~~~~~~~~  261 (325)
T cd05594         241 GGPDDAKEIMQHKFFAGIVWQ  261 (325)
T ss_pred             CCCCCHHHHhcCCCcCCCCHH
Confidence                89999999999876544


No 46 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00  E-value=1e-46  Score=389.10  Aligned_cols=255  Identities=27%  Similarity=0.462  Sum_probs=227.5

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... .......+..|.+++..+ +||||+++++++...+.+|+||||++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            369999999999999999999999999975421 223345667788888866 79999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      ++|...+.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence            58999999888999999999999999999999999999999999999999999999999999876543333345567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC-
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL-  360 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp-  360 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+.......+......+|..+++++.++|.+||++||.+|| 
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~  240 (321)
T cd05591         161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLG  240 (321)
T ss_pred             cccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence            9999999999999999999999999999999999999999999999998888888888999999999999999999999 


Q ss_pred             ------CHHHHhcCcccCcccchhh
Q psy18060        361 ------SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       361 ------s~~elL~Hpw~~~~~~~~~  379 (549)
                            +++++++||||....+...
T Consensus       241 ~~~~~~~~~~~~~hp~~~~~~~~~~  265 (321)
T cd05591         241 CVASQGGEDAIKQHPFFKEIDWVLL  265 (321)
T ss_pred             CCCCCCCHHHHhcCCccCCCCHHHH
Confidence                  8999999999987655444


No 47 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=100.00  E-value=1.6e-46  Score=388.20  Aligned_cols=256  Identities=26%  Similarity=0.462  Sum_probs=225.2

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHH---HhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQ---KHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il---~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      |++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|++++   +.++||||+++++++...+.+|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            6789999999999999999999999999999975431 223345666776665   456799999999999999999999


Q ss_pred             EecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||+.| +|...+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++..........
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS  159 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence            999984 78877754 5799999999999999999999999999999999999999999999999999875433333345


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhC
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~d  355 (549)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++.+.++|.+||+.|
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~d  239 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRN  239 (324)
T ss_pred             ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcC
Confidence            56899999999999999999999999999999999999999999998888888888888889999999999999999999


Q ss_pred             cCCCC-----CHHHHhcCcccCcccch
Q psy18060        356 ASQRL-----SWPELLHHPLVKDNLSS  377 (549)
Q Consensus       356 P~~Rp-----s~~elL~Hpw~~~~~~~  377 (549)
                      |.+||     ++.++++||||++....
T Consensus       240 P~~R~~~~~~~~~~l~~~~~f~~~~~~  266 (324)
T cd05589         240 PERRLGSGEKDAEDVKKQPFFRDINWD  266 (324)
T ss_pred             HhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence            99999     69999999999876443


No 48 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00  E-value=1.2e-46  Score=388.21  Aligned_cols=253  Identities=25%  Similarity=0.474  Sum_probs=226.3

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|..+++.+ +||||+++++++...+.+|+||||+. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999997643 1223445667888888887 79999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|...+.+...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence            58999998888999999999999999999999999999999999999999999999999999875433333334567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++.+.+||.+||..||.+|||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s  240 (318)
T cd05570         161 DYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLG  240 (318)
T ss_pred             cccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCC
Confidence            99999999999999999999999999999999999999998888888888888888899999999999999999999999


Q ss_pred             H-----HHHhcCcccCcccch
Q psy18060        362 W-----PELLHHPLVKDNLSS  377 (549)
Q Consensus       362 ~-----~elL~Hpw~~~~~~~  377 (549)
                      +     .++++||||+...+.
T Consensus       241 ~~~~~~~~ll~~~~~~~~~~~  261 (318)
T cd05570         241 CLPTGEQDIKGHPFFREIDWD  261 (318)
T ss_pred             CCCCCHHHHhcCCCcCCCCHH
Confidence            9     999999999876543


No 49 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00  E-value=1.3e-46  Score=387.69  Aligned_cols=255  Identities=26%  Similarity=0.469  Sum_probs=223.0

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHh-cCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKH-LAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... ..........|..++.. .+||||+++++++...+.+|+||||++ 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            369999999999999999999999999975421 12233445566666665 489999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence            58999999888999999999999999999999999999999999999999999999999999976543333445568999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+......+|..++.++.++|.+||..||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~  240 (316)
T cd05592         161 DYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLG  240 (316)
T ss_pred             cccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence            99999999998999999999999999999999999999998888888887777788899999999999999999999998


Q ss_pred             H-HHHhcCcccCcccchhh
Q psy18060        362 W-PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~-~elL~Hpw~~~~~~~~~  379 (549)
                      + .++++||||........
T Consensus       241 ~~~~l~~h~~~~~~~~~~~  259 (316)
T cd05592         241 VDGDIRQHPFFRGIDWERL  259 (316)
T ss_pred             ChHHHHcCcccCCCCHHHH
Confidence            6 58999999987654433


No 50 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00  E-value=2.1e-46  Score=387.25  Aligned_cols=256  Identities=30%  Similarity=0.493  Sum_probs=226.9

Q ss_pred             EEEEecCCcEEEEEEEEc---CCCceEEEEEEecCCC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        124 ICLIGEGSFGKVFKAIHL---DLKKTVALKIISKSGR--SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++.||+|+||.||++...   .+++.||+|++.+...  .......+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            367999999999999864   4688999999975421  22334567889999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+. ++|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            998 5899999988899999999999999999999999999999999999999999999999999987654333334556


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcC
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      .||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+..+...+|+.+++.+.+||.+||++||.
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  240 (323)
T cd05584         161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPS  240 (323)
T ss_pred             CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHh
Confidence            79999999999998889999999999999999999999999999888888888888888999999999999999999999


Q ss_pred             CCC-----CHHHHhcCcccCcccchhh
Q psy18060        358 QRL-----SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       358 ~Rp-----s~~elL~Hpw~~~~~~~~~  379 (549)
                      +||     +++++++||||........
T Consensus       241 ~R~~~~~~~~~~l~~h~~~~~~~~~~~  267 (323)
T cd05584         241 SRLGAGPGDAAEVQSHPFFRHVNWDDL  267 (323)
T ss_pred             HcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence            999     8999999999987544333


No 51 
>KOG0610|consensus
Probab=100.00  E-value=4.8e-47  Score=382.51  Aligned_cols=265  Identities=32%  Similarity=0.462  Sum_probs=238.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      .-.+++|++++.||+|.-|+||+|..+.++..+|+|++.+... ..+.......|..||+.++||.++.+|+.|+..+..
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            3456789999999999999999999999999999999988663 355567788899999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc-
Q psy18060        194 VLITEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV-  269 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~-  269 (549)
                      +++||||. |+|..+++++  +.|++..++.++.+++.||+|||-.|||.|||||+||||.++|+|-|.||-++..... 
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            99999998 5899988775  4699999999999999999999999999999999999999999999999988742210 


Q ss_pred             --------------------------------C-c----------------------ccccccCCCCcccccccccCCCC
Q psy18060        270 --------------------------------G-T----------------------HMLTSIKGTPLYMAPELIAERPY  294 (549)
Q Consensus       270 --------------------------------~-~----------------------~~~~~~~GT~~Y~APE~l~~~~y  294 (549)
                                                      . .                      ....+++||-.|.|||++.+..+
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                            0 0                      11235689999999999999999


Q ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc--cCCHHHHHHHHHhchhCcCCCCC----HHHHhcC
Q psy18060        295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS--QVSETYKDLVKGLLEKDASQRLS----WPELLHH  368 (549)
Q Consensus       295 ~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dlI~~~L~~dP~~Rps----~~elL~H  368 (549)
                      +.++|+|+|||++|||+.|..||.+.+..+++.+|..+++.+|.  .++..++|||+++|.+||.+|+.    |+||.+|
T Consensus       313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence            99999999999999999999999999999999999999999884  57899999999999999999998    9999999


Q ss_pred             cccCcccchhh
Q psy18060        369 PLVKDNLSSEI  379 (549)
Q Consensus       369 pw~~~~~~~~~  379 (549)
                      |||++..+.-+
T Consensus       393 pFF~gVnWaLi  403 (459)
T KOG0610|consen  393 PFFEGVNWALI  403 (459)
T ss_pred             ccccCCChhhe
Confidence            99999887744


No 52 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00  E-value=2e-46  Score=393.18  Aligned_cols=258  Identities=30%  Similarity=0.480  Sum_probs=224.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            469999999999999999999999999999999975432 2234456788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH----  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~----  272 (549)
                      ||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.+.....    
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            9997 58999999888999999999999999999999999999999999999999999999999999875432110    


Q ss_pred             ----------------------------------cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q psy18060        273 ----------------------------------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFK  318 (549)
Q Consensus       273 ----------------------------------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~  318 (549)
                                                        ...+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                              0113469999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHhcCC--CCCCc--cCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccch
Q psy18060        319 TVSILHLIRLLKTQD--VTFPS--QVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSS  377 (549)
Q Consensus       319 ~~~~~~~~~~i~~~~--~~~p~--~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~  377 (549)
                      ..+.......+....  ..+|.  .+++++++||.+||. +|.+|++   +.|+++||||+.....
T Consensus       241 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~  305 (364)
T cd05599         241 SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWE  305 (364)
T ss_pred             CCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence            988887777765433  23343  479999999999996 9999998   9999999999876543


No 53 
>KOG0201|consensus
Probab=100.00  E-value=1.2e-48  Score=396.68  Aligned_cols=256  Identities=34%  Similarity=0.556  Sum_probs=232.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ..|..++.||+|+||.||+|.+..+++.||+|++.... ...+...+.+|+.++.++++|||.++|+++-.+..++|+||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhh-cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            34777899999999999999999999999999997643 34456788999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      ||+ |++.+.++..+.+.|..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||.+..+........++
T Consensus        92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf  171 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF  171 (467)
T ss_pred             HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence            998 5899999988888999999999999999999999999999999999999999999999999998887665556788


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchhCc
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      +|||+|||||++.+..|+.|+||||||++++||++|.+|+....++..+..|.... +.+...+|+.+++||..||.+||
T Consensus       172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCc
Confidence            99999999999999999999999999999999999999999988877766665443 33445799999999999999999


Q ss_pred             CCCCCHHHHhcCcccCccc
Q psy18060        357 SQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       357 ~~Rps~~elL~Hpw~~~~~  375 (549)
                      +.||||.++|+|+|++...
T Consensus       252 ~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  252 EFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             ccCcCHHHHhhhHHHHhcC
Confidence            9999999999999998743


No 54 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=100.00  E-value=1.2e-46  Score=392.20  Aligned_cols=259  Identities=31%  Similarity=0.526  Sum_probs=228.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.++..++||||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4699999999999999999999999999999999764322 234567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-----  271 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-----  271 (549)
                      ||+. ++|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++......     
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            9997 5899999988899999999999999999999999999999999999999999999999999997654332     


Q ss_pred             ------------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q psy18060        272 ------------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIR  327 (549)
Q Consensus       272 ------------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~  327 (549)
                                              .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~  240 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN  240 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence                                    12334579999999999999999999999999999999999999999988877777


Q ss_pred             HHhc--CCCCCCc--cCCHHHHHHHHHhchhCcCCCCC-HHHHhcCcccCcccchh
Q psy18060        328 LLKT--QDVTFPS--QVSETYKDLVKGLLEKDASQRLS-WPELLHHPLVKDNLSSE  378 (549)
Q Consensus       328 ~i~~--~~~~~p~--~~s~~~~dlI~~~L~~dP~~Rps-~~elL~Hpw~~~~~~~~  378 (549)
                      .+..  ....+|.  .+++++.+||.+||. ||.+||+ +.++++||||++.....
T Consensus       241 ~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~~  295 (350)
T cd05573         241 KIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWEN  295 (350)
T ss_pred             HHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHHH
Confidence            7766  3444554  359999999999997 9999999 99999999998765443


No 55 
>KOG0192|consensus
Probab=100.00  E-value=2.5e-46  Score=389.10  Aligned_cols=247  Identities=28%  Similarity=0.525  Sum_probs=218.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCce-EEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-EEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKT-VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-EFVLI  196 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~-vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-~~~iV  196 (549)
                      ....+.+.||+|+||+||+|.++  |+. ||+|++..........+.+.+|+.++.+++|||||++++++.... .+.||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV  118 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV  118 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence            34455666999999999999988  566 999999877666555789999999999999999999999998877 79999


Q ss_pred             EecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-CccccccCCcEEEecCC-cEEEeecccceecccCc
Q psy18060        197 TEFAH-MSLSNLLEQ--RKKLSETICVQILSNLISALYYLHSNR-VLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGT  271 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~g-IiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~  271 (549)
                      |||+. |+|.+++..  .+.++...+..|+.||+.|++|||+++ ||||||||+|||++.++ ++||||||+++......
T Consensus       119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~  198 (362)
T KOG0192|consen  119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK  198 (362)
T ss_pred             EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence            99998 799999988  678999999999999999999999999 99999999999999998 99999999998776543


Q ss_pred             ccccccCCCCccccccccc--CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCccCCHHHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIA--ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK--TQDVTFPSQVSETYKDL  347 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~--~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~dl  347 (549)
                      ...+...||+.|||||++.  ...|+.|+||||||+++|||+||+.||.+....+....+.  ...+.+|..+++.+..+
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l  278 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSL  278 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence            3445578999999999999  6699999999999999999999999999998866666654  33456677899999999


Q ss_pred             HHHhchhCcCCCCCHHHHhc
Q psy18060        348 VKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~  367 (549)
                      |.+||..||..||++.+++.
T Consensus       279 ~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  279 MERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHhCCCCCCcCCCHHHHHH
Confidence            99999999999999998864


No 56 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00  E-value=2.6e-46  Score=386.37  Aligned_cols=255  Identities=30%  Similarity=0.519  Sum_probs=223.5

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHH-HHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECE-IQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|.. +++.++||||+++++.+...+.+|+||||+. 
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            469999999999999999999999999975432 1222334444444 5678999999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence            58999999888999999999999999999999999999999999999999999999999999875433333345567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+......+++.+++.+.++|.+||+.||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  240 (323)
T cd05575         161 EYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLG  240 (323)
T ss_pred             hhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCC
Confidence            99999999999999999999999999999999999999998888888888888888889999999999999999999999


Q ss_pred             H----HHHhcCcccCcccchhh
Q psy18060        362 W----PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~----~elL~Hpw~~~~~~~~~  379 (549)
                      +    .++++||||.......+
T Consensus       241 ~~~~~~~il~~~~~~~~~~~~~  262 (323)
T cd05575         241 AKDDFLEIKNHVFFSSINWDDL  262 (323)
T ss_pred             CCCCHHHHHcCCCcCCCCHHHH
Confidence            7    69999999987654443


No 57 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00  E-value=4.5e-46  Score=393.51  Aligned_cols=256  Identities=27%  Similarity=0.455  Sum_probs=220.7

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++.+.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            58999999999999999999999999999999875432 23345678899999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC-------
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG-------  270 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~-------  270 (549)
                      |++ |+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....       
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~  161 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ  161 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence            997 589999988888999999999999999999999999999999999999999999999999997532100       


Q ss_pred             ----------------------------------------cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHH
Q psy18060        271 ----------------------------------------THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEI  310 (549)
Q Consensus       271 ----------------------------------------~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eL  310 (549)
                                                              .....+.+||+.|+|||++.+..|+.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el  241 (382)
T cd05625         162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  241 (382)
T ss_pred             cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence                                                    0001235799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHhcC--CCCCC--ccCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccc
Q psy18060        311 HMGHPPFKTVSILHLIRLLKTQ--DVTFP--SQVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLS  376 (549)
Q Consensus       311 ltG~~Pf~~~~~~~~~~~i~~~--~~~~p--~~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~  376 (549)
                      ++|++||.+.+.......+...  ...+|  ..+++++.++|.+|+ .+|.+|++   +.++++||||+....
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcCh
Confidence            9999999988877766666542  23333  468999999999986 59999997   999999999987544


No 58 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=100.00  E-value=3.7e-46  Score=386.68  Aligned_cols=257  Identities=30%  Similarity=0.465  Sum_probs=225.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.++..++||||+++++++...+..|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999975432 1234467889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....   ....
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~  157 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANS  157 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCC
Confidence            9997 58999999888999999999999999999999999999999999999999999999999999976543   3355


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCC------ccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFP------SQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p------~~~s~~~~dlI  348 (549)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+....  ...|      ..+++++.+||
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li  237 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLI  237 (333)
T ss_pred             cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHH
Confidence            679999999999999999999999999999999999999999988877766665422  1122      14689999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCcccchh
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~  378 (549)
                      .+||..+|.+||++.++++||||.+.....
T Consensus       238 ~~~l~~~~~rr~s~~~ll~h~~~~~~~~~~  267 (333)
T cd05600         238 TKLINDPSRRFGSLEDIKNHPFFKEVDWNE  267 (333)
T ss_pred             HHHhhChhhhcCCHHHHHhCcccCCCCHHH
Confidence            999999999999999999999998754433


No 59 
>KOG0594|consensus
Probab=100.00  E-value=8.3e-47  Score=377.29  Aligned_cols=258  Identities=31%  Similarity=0.487  Sum_probs=225.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCC-eeEEEEEEeeCC-----
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN-IIKFIASHETLN-----  191 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~-----  191 (549)
                      +..|..+++||+|+||+||+|+.+.+|+.||+|.+......+.......+|+.+++.++|+| ||++++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            56788888999999999999999999999999999866543233456689999999999999 999999998777     


Q ss_pred             -EEEEEEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        192 -EFVLITEFAHMSLSNLLEQRK----KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       192 -~~~iV~E~~~gsL~~~l~~~~----~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                       .+++|+||++.+|..+++...    .++...++.+++||+.||+|||++||+||||||+||||+++|.+||+|||+|+.
T Consensus        90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence             899999999999999998865    588889999999999999999999999999999999999999999999999998


Q ss_pred             cccCcccccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------
Q psy18060        267 MAVGTHMLTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------  332 (549)
Q Consensus       267 ~~~~~~~~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------  332 (549)
                      ...+....+..++|.+|+|||++.+. .|+..+||||+|||++||+++++.|++.+..+++..|..-             
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~  249 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS  249 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence            87666667888999999999999875 7999999999999999999999999999887777666321             


Q ss_pred             -----CCCCC------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        333 -----DVTFP------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       333 -----~~~~p------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                           ...+|            +..++...+++.+||+.+|.+|.|+..+|.||||.+..
T Consensus       250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence                 00111            11335888999999999999999999999999998653


No 60 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00  E-value=4.3e-46  Score=386.01  Aligned_cols=253  Identities=26%  Similarity=0.474  Sum_probs=220.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... .......+..|..++..+ +||||+++++++...+.+|+||||++ 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            469999999999999999999999999976432 233456678899999888 79999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence            58999998888999999999999999999999999999999999999999999999999999875332223345568999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC---------CHHHHHHHHhcCCCCCCccCCHHHHHHHHHhc
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV---------SILHLIRLLKTQDVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~---------~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L  352 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...         ......+.+......+|..+++++.++|.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L  240 (329)
T cd05588         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFL  240 (329)
T ss_pred             cccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence            999999999999999999999999999999999999632         12234555667777888899999999999999


Q ss_pred             hhCcCCCCC------HHHHhcCcccCcccch
Q psy18060        353 EKDASQRLS------WPELLHHPLVKDNLSS  377 (549)
Q Consensus       353 ~~dP~~Rps------~~elL~Hpw~~~~~~~  377 (549)
                      ..||.+|||      ++++++||||......
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~  271 (329)
T cd05588         241 NKDPKERLGCHPQTGFRDIKSHPFFRNIDWD  271 (329)
T ss_pred             ccCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence            999999997      7899999999765443


No 61 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00  E-value=7e-46  Score=392.17  Aligned_cols=258  Identities=25%  Similarity=0.433  Sum_probs=220.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|++++.||+|+||+||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            58999999999999999999999999999999976432 33445678899999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc------
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT------  271 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~------  271 (549)
                      |++ |+|.+++.+...+++..++.++.||+.||+|||+.||+||||||+|||++.+|.+||+|||+++......      
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~  161 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ  161 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence            997 5899999988899999999999999999999999999999999999999999999999999975321000      


Q ss_pred             -----------------------------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHH
Q psy18060        272 -----------------------------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEI  310 (549)
Q Consensus       272 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eL  310 (549)
                                                               ....+.+||+.|+|||++.+..++.++|||||||++|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el  241 (381)
T cd05626         162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM  241 (381)
T ss_pred             ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence                                                     001245799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHhc--CCCCCCc--cCCHHHHHHHHHhc--hhCcCCCCCHHHHhcCcccCcccch
Q psy18060        311 HMGHPPFKTVSILHLIRLLKT--QDVTFPS--QVSETYKDLVKGLL--EKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       311 ltG~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~s~~~~dlI~~~L--~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      ++|+.||...+.......+..  ....+|.  .+++++.+||.+|+  ..+|..|+++.++++||||.+....
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~  314 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS  314 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence            999999998877666555543  2233443  58999999999965  4555569999999999999876543


No 62 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=100.00  E-value=6.1e-46  Score=382.88  Aligned_cols=255  Identities=25%  Similarity=0.470  Sum_probs=223.5

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHh-cCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKH-LAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++..... ..........|..++.. ++||||+++++++.+.+.+++||||+. 
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999975421 11223455667777776 489999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|.+++.....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.............||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence            68999999888899999999999999999999999999999999999999999999999999875433333344567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..++.+++++|.+||++||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  240 (316)
T cd05619         161 DYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLG  240 (316)
T ss_pred             cccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCC
Confidence            99999999999999999999999999999999999999988888888877777788889999999999999999999999


Q ss_pred             HH-HHhcCcccCcccchhh
Q psy18060        362 WP-ELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~~-elL~Hpw~~~~~~~~~  379 (549)
                      +. ++++||||........
T Consensus       241 ~~~~l~~h~~~~~~~~~~~  259 (316)
T cd05619         241 VKGDIRQHPFFREIDWSAL  259 (316)
T ss_pred             ChHHHHcCcccCCCCHHHH
Confidence            96 8999999988655444


No 63 
>KOG0599|consensus
Probab=100.00  E-value=1.9e-47  Score=366.59  Aligned_cols=257  Identities=31%  Similarity=0.510  Sum_probs=232.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC------ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR------SGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      ...+|.--++||.|..+.|-+|.++.+++.+|+|++.....      .....++-.+|+.||+++ .||+|+++.++|+.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            34567778899999999999999999999999999865431      122245567899999998 69999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA  268 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~  268 (549)
                      +..+++|+|+|+ |.|+++|.....++|...+.|++|++.|+.|||.++||||||||+|||++++-.+||+|||+|+.+.
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence            999999999998 8899999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             cCcccccccCCCCccccccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----c
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIA------ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----S  338 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~------~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p----~  338 (549)
                      ++ ......||||+|.|||.+.      ...|+..+|+||+|||+|-|+.|.+||......-.++.|..+.+.|.    .
T Consensus       175 ~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa  253 (411)
T KOG0599|consen  175 PG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA  253 (411)
T ss_pred             Cc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh
Confidence            77 4568889999999999984      35688999999999999999999999999999999999999988775    3


Q ss_pred             cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       339 ~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ++|...+|||.+||+.||.+|+|++|+|.||||...
T Consensus       254 dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  254 DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             hccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence            689999999999999999999999999999999654


No 64 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00  E-value=1.1e-45  Score=381.91  Aligned_cols=261  Identities=26%  Similarity=0.484  Sum_probs=230.1

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      +|+..+.||+|+||.||+|.+..+++.||+|++.+... .......+..|..++..+. ||+|+++++++...+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            47889999999999999999999999999999975421 2233456777888888885 577888999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++ |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...........
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            9997 589999998889999999999999999999999999999999999999999999999999998764433333345


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+++.+||+++|
T Consensus       161 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p  240 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHP  240 (323)
T ss_pred             ccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCH
Confidence            67999999999999989999999999999999999999999999988888888888888899999999999999999999


Q ss_pred             CCCCC-----HHHHhcCcccCcccchhhh
Q psy18060        357 SQRLS-----WPELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       357 ~~Rps-----~~elL~Hpw~~~~~~~~~~  380 (549)
                      .+|++     .+++++||||....+....
T Consensus       241 ~~R~~~~~~~~~~i~~h~~f~~~~~~~~~  269 (323)
T cd05615         241 SKRLGCGPEGERDIREHAFFRRIDWDKLE  269 (323)
T ss_pred             hhCCCCCCCCHHHHhcCcccCCCCHHHHh
Confidence            99997     4799999999876554443


No 65 
>KOG4717|consensus
Probab=100.00  E-value=6.6e-47  Score=387.77  Aligned_cols=256  Identities=31%  Similarity=0.509  Sum_probs=239.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .-|.+.+.||+|.|++|-+|++.-||..||||++.+...+.-....+.+|++.|+.++|||||++|++......+|+|+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            44888899999999999999999999999999999988877777889999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEe-cCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN-KDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~-~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      +-+ |+|+++|.++ ..++|..+++++.||+.|+.|||+..+|||||||+|+.+- .-|.|||+|||++..+.++ ...+
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-~kL~  176 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-KKLT  176 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc-chhh
Confidence            987 5999999775 5799999999999999999999999999999999998765 5599999999999988877 4568


Q ss_pred             ccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchh
Q psy18060        276 SIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      +.||+..|-|||++.+..|+ +++||||||||||.|.+|++||...+..+.+.+|..+.+..|..+|.++++||..||.+
T Consensus       177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvR  256 (864)
T KOG4717|consen  177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVR  256 (864)
T ss_pred             cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhc
Confidence            88999999999999999998 56899999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCHHHHhcCcccCccc
Q psy18060        355 DASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ||++|.|.+||..|+|++...
T Consensus       257 dPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  257 DPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             CchhhccHHHHhccccccCCC
Confidence            999999999999999998653


No 66 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=100.00  E-value=4.7e-46  Score=392.71  Aligned_cols=257  Identities=28%  Similarity=0.469  Sum_probs=221.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|.+++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+++++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            468999999999999999999999999999999865432 2334567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-----  271 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-----  271 (549)
                      ||+. |+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++......     
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            9997 6899999988899999999999999999999999999999999999999999999999999986321100     


Q ss_pred             -------c-----------------------------------cccccCCCCcccccccccCCCCCcchhhHHHHHHHHH
Q psy18060        272 -------H-----------------------------------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYE  309 (549)
Q Consensus       272 -------~-----------------------------------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~e  309 (549)
                             .                                   .....+||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                   0                                   0012469999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCHHHHHHHHhcC--CCCCCc--cCCHHHHHHHHHhchhCcCCC---CCHHHHhcCcccCcccc
Q psy18060        310 IHMGHPPFKTVSILHLIRLLKTQ--DVTFPS--QVSETYKDLVKGLLEKDASQR---LSWPELLHHPLVKDNLS  376 (549)
Q Consensus       310 LltG~~Pf~~~~~~~~~~~i~~~--~~~~p~--~~s~~~~dlI~~~L~~dP~~R---ps~~elL~Hpw~~~~~~  376 (549)
                      |++|.+||...+.......+...  ...+|.  .+++++++||.+||. +|.+|   +|+.|++.||||++...
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         241 CLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            99999999988877777766543  334454  579999999999997 77765   59999999999987544


No 67 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00  E-value=1.1e-45  Score=374.32  Aligned_cols=252  Identities=32%  Similarity=0.502  Sum_probs=210.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcC-CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc---CCCCeeEEEEEEe-----e
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLD-LKKTVALKIISKSGRSGKELSSLKQECEIQKHL---AHPNIIKFIASHE-----T  189 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~-----~  189 (549)
                      ++|++.+.||+|+||.||+|.+.. ++..+|+|.+..............+|+.+++.+   .||||+++++++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            468999999999999999999854 468899999876543333334456677777665   6999999999874     3


Q ss_pred             CCEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        190 LNEFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       190 ~~~~~iV~E~~~gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                      ...+++|||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T cd07862          81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY  160 (290)
T ss_pred             CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence            4568999999999999999764  45899999999999999999999999999999999999999999999999999766


Q ss_pred             ccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-------------
Q psy18060        268 AVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-------------  334 (549)
Q Consensus       268 ~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-------------  334 (549)
                      ... .......||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.....             
T Consensus       161 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         161 SFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             cCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence            543 233456799999999999888999999999999999999999999998877666555432100             


Q ss_pred             --------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 --------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 --------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                    .+.+.+++.++++|.+||+.||++|||+.|+|+||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                          0113467889999999999999999999999999997


No 68 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00  E-value=2.3e-46  Score=385.83  Aligned_cols=254  Identities=29%  Similarity=0.449  Sum_probs=226.6

Q ss_pred             EEEecCCcEEEEEEEE---cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        125 CLIGEGSFGKVFKAIH---LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~---~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      +.||+|+||.||++.+   ..+|+.||+|++.+..........+.+|++++++++||||+++++++...+.+|+||||+.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6799999999999876   3578999999997644333334566789999999999999999999999999999999997


Q ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCC
Q psy18060        202 -MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT  280 (549)
Q Consensus       202 -gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT  280 (549)
                       |+|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.............||
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~  161 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT  161 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCC
Confidence             6899999888889999999999999999999999999999999999999999999999999997665443334556899


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCC
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRL  360 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp  360 (549)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+......+|..+++.+.++|.+||+.||.+||
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~  241 (318)
T cd05582         162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRL  241 (318)
T ss_pred             hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcC
Confidence            99999999998889999999999999999999999999999888888888888888999999999999999999999999


Q ss_pred             C-----HHHHhcCcccCcccchh
Q psy18060        361 S-----WPELLHHPLVKDNLSSE  378 (549)
Q Consensus       361 s-----~~elL~Hpw~~~~~~~~  378 (549)
                      |     +.+++.||||.......
T Consensus       242 ~a~~~~~~~~~~~~~~~~~~~~~  264 (318)
T cd05582         242 GAGPDGVEEIKRHPFFSTIDWNK  264 (318)
T ss_pred             CCCCCCHHHHhCCCCcCCCCHHH
Confidence            9     67799999998764433


No 69 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00  E-value=1.2e-45  Score=382.77  Aligned_cols=252  Identities=25%  Similarity=0.463  Sum_probs=219.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.++.++ +||||+++++++...+.+++||||+. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999976432 233455677888888776 89999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.............||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence            58999998888999999999999999999999999999999999999999999999999999875433333345568999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCC---------CCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhc
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT---------VSILHLIRLLKTQDVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~---------~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L  352 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||..         .........+......+|..++..+.++|.+||
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L  240 (329)
T cd05618         161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL  240 (329)
T ss_pred             cccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999952         122334455667777889999999999999999


Q ss_pred             hhCcCCCCC------HHHHhcCcccCcccc
Q psy18060        353 EKDASQRLS------WPELLHHPLVKDNLS  376 (549)
Q Consensus       353 ~~dP~~Rps------~~elL~Hpw~~~~~~  376 (549)
                      ..||.+|||      +.++++||||+...+
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         241 NKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             cCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            999999998      579999999987544


No 70 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00  E-value=7.3e-46  Score=388.86  Aligned_cols=260  Identities=28%  Similarity=0.488  Sum_probs=225.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            368999999999999999999999999999999975332 2334567888999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-----  271 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-----  271 (549)
                      ||++ |+|.+++.+++.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++......     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            9997 5899999988899999999999999999999999999999999999999999999999999986542110     


Q ss_pred             ------------------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Q psy18060        272 ------------------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS  321 (549)
Q Consensus       272 ------------------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~  321 (549)
                                                    ......+||+.|+|||++.+..++.++|||||||++|||++|++||...+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                                          01124579999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHhcC--CCCCCc--cCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccchhh
Q psy18060        322 ILHLIRLLKTQ--DVTFPS--QVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       322 ~~~~~~~i~~~--~~~~p~--~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~  379 (549)
                      .......+...  ...+|+  .++++++++|.+|+. ||.+|++   +.++++||||++..+...
T Consensus       241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~~~~  304 (360)
T cd05627         241 PQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDWGHI  304 (360)
T ss_pred             HHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCHHHH
Confidence            88877777653  234454  478999999999874 9999984   799999999998765544


No 71 
>KOG1035|consensus
Probab=100.00  E-value=1.1e-46  Score=418.76  Aligned_cols=352  Identities=24%  Similarity=0.350  Sum_probs=229.3

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      .++|+.+++||+||||.||||+++.+|+.||||+|+... +.....++.||+++|++|+|||||+||.+|.+...-..++
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            567999999999999999999999999999999998876 5556678999999999999999999999997755444444


Q ss_pred             hhhh---cccccC----CCCccccCCCccccc----------cccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEE
Q psy18060         88 EFAH---MSLSKL----GEPWFHNHCQPVKME----------KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALK  150 (549)
Q Consensus        88 ey~~---~sLskl----g~p~~~~~~~~~~~~----------~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK  150 (549)
                      +-..   .+++.-    ..+..-  .++.+.+          ........|.--...+.|+.-.--.-.+. .|...  -
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~--~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~de-dg~~~--S  631 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIR--YQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDE-DGRNL--S  631 (1351)
T ss_pred             cccccchhhhcccCCCcccceee--eccCCCcccCcchhhccccCccccccccccccccccCCcccccccc-ccccc--c
Confidence            3321   111111    110000  0000000          00000000100001111100000000000 00000  0


Q ss_pred             EEecCCCChHHHHHHHHHHHHHHh--cCCCCeeEEEEEEeeCCEEEEEEecCCCCHHHHHHhcCCCC--HHHHHHHHHHH
Q psy18060        151 IISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLS--ETICVQILSNL  226 (549)
Q Consensus       151 ~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~~~~iV~E~~~gsL~~~l~~~~~l~--e~~~~~i~~qI  226 (549)
                      ..+.........+....+-.+.++  ..-|+     -..+....+||.||||..++.+++-.++.+.  ....+++++||
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~-----~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreI  706 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPM-----VPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREI  706 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccc-----cccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHH
Confidence            000000000000001111111111  11222     1223345689999999987666665555554  77899999999


Q ss_pred             HHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc------------------cCcccccccCCCCccccccc
Q psy18060        227 ISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA------------------VGTHMLTSIKGTPLYMAPEL  288 (549)
Q Consensus       227 l~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~------------------~~~~~~~~~~GT~~Y~APE~  288 (549)
                      +.||.|+|++|||||||||.|||++.++.|||+|||+|+...                  .+....|+.+||..|+|||+
T Consensus       707 lEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl  786 (1351)
T KOG1035|consen  707 LEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL  786 (1351)
T ss_pred             HHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence            999999999999999999999999999999999999998621                  11124577899999999999


Q ss_pred             ccCC---CCCcchhhHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCCCCCccC----CHHHHHHHHHhchhCcCCCC
Q psy18060        289 IAER---PYDHTADLWSLGCIAYEIHMGHPPFKT-VSILHLIRLLKTQDVTFPSQV----SETYKDLVKGLLEKDASQRL  360 (549)
Q Consensus       289 l~~~---~y~~ksDIwSlGvil~eLltG~~Pf~~-~~~~~~~~~i~~~~~~~p~~~----s~~~~dlI~~~L~~dP~~Rp  360 (549)
                      +.+.   +|+.|+|+||||||++||+   +||.+ +....++..+..+.++.|+.+    -+.-..+|.+||++||.+||
T Consensus       787 l~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRP  863 (1351)
T KOG1035|consen  787 LSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRP  863 (1351)
T ss_pred             hcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCC
Confidence            9764   4999999999999999998   47865 466677777877766665322    24456899999999999999


Q ss_pred             CHHHHhcCcccCc
Q psy18060        361 SWPELLHHPLVKD  373 (549)
Q Consensus       361 s~~elL~Hpw~~~  373 (549)
                      ||.|+|++.||-.
T Consensus       864 tA~eLL~s~llpp  876 (1351)
T KOG1035|consen  864 TATELLNSELLPP  876 (1351)
T ss_pred             CHHHHhhccCCCc
Confidence            9999999999973


No 72 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00  E-value=2e-45  Score=380.74  Aligned_cols=255  Identities=24%  Similarity=0.451  Sum_probs=221.7

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.++.++ .||||+++++++...+.+|+||||+. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            469999999999999999999999999976432 233456678899998888 69999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence            58999998888999999999999999999999999999999999999999999999999999875433333345568999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchh
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV-------SILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-------~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      .|+|||++.+..++.++|||||||++|+|++|+.||...       ........+...+..+|..+++.+.++|.+||.+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             ccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999532       2334555666677788889999999999999999


Q ss_pred             CcCCCCC------HHHHhcCcccCcccchhh
Q psy18060        355 DASQRLS------WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       355 dP~~Rps------~~elL~Hpw~~~~~~~~~  379 (549)
                      ||.+|++      ++++++||||....+...
T Consensus       241 dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~  271 (327)
T cd05617         241 DPKERLGCQPQTGFSDIKSHTFFRSIDWDLL  271 (327)
T ss_pred             CHHHcCCCCCCCCHHHHHcCCCCCCCCHHHH
Confidence            9999998      469999999987655443


No 73 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=1.9e-45  Score=381.00  Aligned_cols=258  Identities=29%  Similarity=0.460  Sum_probs=221.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEc---CCCceEEEEEEecCCC--ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHL---DLKKTVALKIISKSGR--SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      +|++.+.||+|+||.||++.+.   .+++.||+|++.+...  .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4889999999999999998764   4789999999975321  223345678899999999 599999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-  271 (549)
                      ++||||+. |+|.+++.++..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...... 
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            99999998 5899999988899999999999999999999999999999999999999999999999999997654322 


Q ss_pred             ccccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCCCCCCccCCHHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYKD  346 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~----~~~~~~~~i~~~~~~~p~~~s~~~~d  346 (549)
                      ......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...    ........+......+|..+++.+.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD  240 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence            223356799999999999765 4789999999999999999999999642    34445555666667788889999999


Q ss_pred             HHHHhchhCcCCCC-----CHHHHhcCcccCcccch
Q psy18060        347 LVKGLLEKDASQRL-----SWPELLHHPLVKDNLSS  377 (549)
Q Consensus       347 lI~~~L~~dP~~Rp-----s~~elL~Hpw~~~~~~~  377 (549)
                      +|.+||+.||.+||     +++++++||||++....
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~  276 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWE  276 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence            99999999999999     78899999999875443


No 74 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00  E-value=7.6e-46  Score=390.83  Aligned_cols=257  Identities=26%  Similarity=0.439  Sum_probs=220.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++.+...+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            369999999999999999999999999999999865321 1223456789999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC------
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG------  270 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~------  270 (549)
                      ||+. |+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|......      
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            9997 689999998888999999999999999999999999999999999999999999999999997432100      


Q ss_pred             -------------------------------------cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhC
Q psy18060        271 -------------------------------------THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG  313 (549)
Q Consensus       271 -------------------------------------~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG  313 (549)
                                                           .......+||+.|||||++.+..++.++|||||||++|+|++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence                                                 0001235799999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHhcCC--CCCC--ccCCHHHHHHHHHhchhCcCCCC---CHHHHhcCcccCcccc
Q psy18060        314 HPPFKTVSILHLIRLLKTQD--VTFP--SQVSETYKDLVKGLLEKDASQRL---SWPELLHHPLVKDNLS  376 (549)
Q Consensus       314 ~~Pf~~~~~~~~~~~i~~~~--~~~p--~~~s~~~~dlI~~~L~~dP~~Rp---s~~elL~Hpw~~~~~~  376 (549)
                      +.||.+.+.......+....  ..+|  ..+++++.++|.+|+ .+|.+|+   |+.++++||||+....
T Consensus       241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~  309 (376)
T cd05598         241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDF  309 (376)
T ss_pred             CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence            99999888777666655432  2233  368999999999976 5999999   9999999999987543


No 75 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=100.00  E-value=1.2e-45  Score=381.79  Aligned_cols=255  Identities=30%  Similarity=0.508  Sum_probs=222.1

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHH-HHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQE-CEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E-i~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+.... ......+..| ..+++.+.||||+++++++...+.+|+||||+. 
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4699999999999999999999999999753211 1122233344 345788899999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............+||+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            58999999888899999999999999999999999999999999999999999999999999976433333345567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|++||...+.......+......+++.+++.+.++|.+||++||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  240 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLG  240 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCC
Confidence            99999999999999999999999999999999999999988888888888877888899999999999999999999998


Q ss_pred             HH----HHhcCcccCcccchhh
Q psy18060        362 WP----ELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~~----elL~Hpw~~~~~~~~~  379 (549)
                      +.    ++++|+||....+..+
T Consensus       241 ~~~~~~~i~~~~~~~~~~~~~~  262 (325)
T cd05602         241 AKDDFMEIKNHIFFSPINWDDL  262 (325)
T ss_pred             CCCCHHHHhcCcccCCCCHHHH
Confidence            75    8999999987655444


No 76 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00  E-value=2.2e-45  Score=387.18  Aligned_cols=259  Identities=28%  Similarity=0.453  Sum_probs=223.9

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            45789999999999999999999999999999999975322 22234457789999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-c
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-M  273 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~  273 (549)
                      ||||+. |+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++....... .
T Consensus       121 v~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~  199 (370)
T cd05596         121 VMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR  199 (370)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence            999997 589998865 4689999999999999999999999999999999999999999999999999987643321 2


Q ss_pred             ccccCCCCcccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCc--cCCHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAER----PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS--QVSETYK  345 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~----~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~~  345 (549)
                      ....+||+.|+|||++.+.    .++.++|||||||++|+|++|++||...+.......+....  ..+|.  .+|.+++
T Consensus       200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  279 (370)
T cd05596         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAK  279 (370)
T ss_pred             CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHH
Confidence            3456799999999998653    47899999999999999999999999988887777776543  44554  5799999


Q ss_pred             HHHHHhchhCcCC--CCCHHHHhcCcccCcccc
Q psy18060        346 DLVKGLLEKDASQ--RLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       346 dlI~~~L~~dP~~--Rps~~elL~Hpw~~~~~~  376 (549)
                      +||.+||+.+|.+  |+|+.++++||||++..+
T Consensus       280 ~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         280 DLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             HHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence            9999999999987  999999999999987543


No 77 
>KOG0658|consensus
Probab=100.00  E-value=1.9e-46  Score=374.39  Aligned_cols=253  Identities=31%  Similarity=0.500  Sum_probs=216.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----E
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----E  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~  192 (549)
                      .-.|...+.+|+|+||.||+|....+++.+|||.+-....-      -.+|+++|+.++|||||++..+|....     .
T Consensus        23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~   96 (364)
T KOG0658|consen   23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVY   96 (364)
T ss_pred             EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence            34588899999999999999999999999999998654332      246899999999999999988874322     3


Q ss_pred             EEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceec
Q psy18060        193 FVLITEFAHMSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSM  267 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~  267 (549)
                      ..+||||++.+|.+.++.    +.+++...++-+..||++||.|||+.||+||||||+|||+|.+ |.+||||||.|+..
T Consensus        97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen   97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            468999999999999985    5789999999999999999999999999999999999999976 99999999999988


Q ss_pred             ccCcccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------
Q psy18060        268 AVGTHMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--------------  332 (549)
Q Consensus       268 ~~~~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--------------  332 (549)
                      ..+.. ..+...|.+|+|||.+.+ ..|+.+.||||.||++.||+-|++.|++.+...++..|..-              
T Consensus       177 ~~~ep-niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~  255 (364)
T KOG0658|consen  177 VKGEP-NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNP  255 (364)
T ss_pred             ccCCC-ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCc
Confidence            76643 366778999999999876 57999999999999999999999999998877776655321              


Q ss_pred             ---CCC------------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        333 ---DVT------------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       333 ---~~~------------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                         ...            +....++++.+|+.++|+.+|.+|.++.|++.||||......
T Consensus       256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence               011            223578999999999999999999999999999999765443


No 78 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00  E-value=2.8e-45  Score=370.69  Aligned_cols=252  Identities=29%  Similarity=0.428  Sum_probs=216.5

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||+|+||+||+|.+..+++.+|+|.+.+.... ......+..|+++++.++||||+++.+++...+.+++||||++ |+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999999999999999999998754322 2234567789999999999999999999999999999999997 589


Q ss_pred             HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCC
Q psy18060        205 SNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT  280 (549)
Q Consensus       205 ~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT  280 (549)
                      ...+..    ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..............||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            877743    3569999999999999999999999999999999999999999999999999998765544444456799


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI----LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.....    ......+......+|+.+++.+.+++.+||+.||
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  240 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDP  240 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCH
Confidence            999999999999999999999999999999999999976532    2333444455566778899999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccCcccchh
Q psy18060        357 SQRL-----SWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       357 ~~Rp-----s~~elL~Hpw~~~~~~~~  378 (549)
                      .+||     +++++++||||++..+..
T Consensus       241 ~~R~~~~~~~~~~~l~h~~~~~~~~~~  267 (280)
T cd05608         241 EKRLGFRDGNCDGLRTHPLFRDLNWRQ  267 (280)
T ss_pred             HHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence            9999     889999999998755443


No 79 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00  E-value=1.2e-45  Score=381.75  Aligned_cols=255  Identities=31%  Similarity=0.503  Sum_probs=223.1

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHH-HHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECE-IQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~-il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+|+.+|+|++.+... .......+..|.. +++.++||||+++++++...+.+|+||||+. 
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            469999999999999999999999999975421 2223344455554 5778999999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.+...+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            58999998888999999999999999999999999999999999999999999999999999875433333345667999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|..||...+.......+......+++..+..+.++|.+||+++|.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~  240 (325)
T cd05604         161 EYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLG  240 (325)
T ss_pred             hhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCC
Confidence            99999999999999999999999999999999999999998888888888887788889999999999999999999998


Q ss_pred             H----HHHhcCcccCcccchhh
Q psy18060        362 W----PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       362 ~----~elL~Hpw~~~~~~~~~  379 (549)
                      +    .++++||||........
T Consensus       241 ~~~~~~~i~~h~~f~~~~~~~~  262 (325)
T cd05604         241 AKEDFLEIQEHPFFESLSWTDL  262 (325)
T ss_pred             CCCCHHHHhcCCCcCCCCHHHH
Confidence            7    58999999987654443


No 80 
>KOG0589|consensus
Probab=100.00  E-value=1.9e-46  Score=389.31  Aligned_cols=259  Identities=33%  Similarity=0.565  Sum_probs=241.8

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE-EEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE-FVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~-~~i  195 (549)
                      .+++|..++.+|+|+||.++.++++..++.+++|.+.-...+....+...+|+.++++++|||||.+.+.|..++. ++|
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            3578999999999999999999999999999999998888777777889999999999999999999999988888 999


Q ss_pred             EEecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        196 ITEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ||+||+ |+|.+.|.+.+  .|+|+.+..|+.|++.|++|||+++|+|||||+.|||++.++.|||+|||+|+.+.+...
T Consensus        82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence            999998 58999997654  589999999999999999999999999999999999999999999999999999988765


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHh
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~  351 (549)
                      ...+..|||.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+...++.+|..+. .++|..++.+++.+|..|
T Consensus       162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~  241 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSM  241 (426)
T ss_pred             hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHH
Confidence            6778899999999999999999999999999999999999999999999999999988776 567889999999999999


Q ss_pred             chhCcCCCCCHHHHhcCcccCccc
Q psy18060        352 LEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      |.++|..||++.++|.+|.+....
T Consensus       242 l~~~P~~RPsa~~LL~~P~l~~~~  265 (426)
T KOG0589|consen  242 LRKNPEHRPSALELLRRPHLLRYL  265 (426)
T ss_pred             hhcCCccCCCHHHHhhChhhhhHH
Confidence            999999999999999999987554


No 81 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=3.8e-45  Score=383.16  Aligned_cols=257  Identities=27%  Similarity=0.416  Sum_probs=215.0

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC----
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN----  191 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----  191 (549)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|.+............+.+|+.+++.++||||+++++++...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            3468899999999999999999999999999999999765444445567789999999999999999999886443    


Q ss_pred             --EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc
Q psy18060        192 --EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV  269 (549)
Q Consensus       192 --~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~  269 (549)
                        .+|+||||++++|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus        98 ~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876          98 FQDVYLVMELMDANLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT  175 (359)
T ss_pred             cceeEEEEeCCCcCHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence              579999999999888775  3589999999999999999999999999999999999999999999999999976543


Q ss_pred             CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-------------------
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK-------------------  330 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~-------------------  330 (549)
                      . ...+...||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+.                   
T Consensus       176 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (359)
T cd07876         176 N-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR  254 (359)
T ss_pred             C-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence            2 22345679999999999999999999999999999999999999998765433222111                   


Q ss_pred             ---cCCCC--------------------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        331 ---TQDVT--------------------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       331 ---~~~~~--------------------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                         .....                    .+...++.+++||.+||+.||.+|||+.|+|+||||....
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  322 (359)
T cd07876         255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY  322 (359)
T ss_pred             HHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence               01000                    0112467889999999999999999999999999997543


No 82 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3e-45  Score=388.85  Aligned_cols=250  Identities=25%  Similarity=0.341  Sum_probs=210.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ...+|++++.||+|+||.||+|.+..+++.||+|....        ..+.+|+++++.++||||+++++++......++|
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv  161 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLI  161 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEE
Confidence            34679999999999999999999999999999997532        3457899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC-ccccc
Q psy18060        197 TEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG-THMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~-~~~~~  275 (549)
                      ||++.++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+..... .....
T Consensus       162 ~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~  241 (391)
T PHA03212        162 LPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY  241 (391)
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence            99999999999988888999999999999999999999999999999999999999999999999999653321 12234


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhc-----------------
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKT-----------------  331 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-------~~~~~~~i~~-----------------  331 (549)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|..||....       ....+..+..                 
T Consensus       242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~  321 (391)
T PHA03212        242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL  321 (391)
T ss_pred             cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence            5679999999999999999999999999999999999998875321       1111111100                 


Q ss_pred             ---------CCC----CCC-----ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        332 ---------QDV----TFP-----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       332 ---------~~~----~~p-----~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                               ...    ..|     ..++.++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                     000    001     1246789999999999999999999999999999763


No 83 
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00  E-value=6e-45  Score=373.32  Aligned_cols=258  Identities=28%  Similarity=0.476  Sum_probs=217.9

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..+++|.+.+.||+|+||.||+|.+..+++.+|+|.+...... .....+.+|+.+++.++||||+++++++...+..++
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence            3457899999999999999999999999999999998754322 223456789999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||||++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus        82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  161 (309)
T cd07872          82 VFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY  161 (309)
T ss_pred             EEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence            99999999998887654 58999999999999999999999999999999999999999999999999997654433333


Q ss_pred             cccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------CC
Q psy18060        275 TSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------DV  334 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~~  334 (549)
                      ....+|+.|+|||++.+ ..++.++|||||||++|+|+||++||.+.+..+....+...                   ..
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07872         162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY  241 (309)
T ss_pred             ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence            44568999999999865 56899999999999999999999999887665444333210                   00


Q ss_pred             CCC-----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        335 TFP-----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       335 ~~p-----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+|           +.++++++++|.+||+.||.+|||+.|+++||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            111           2468899999999999999999999999999999864


No 84 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00  E-value=2.1e-45  Score=379.15  Aligned_cols=254  Identities=30%  Similarity=0.485  Sum_probs=222.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHH-HHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQEC-EIQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei-~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.||+|++.+... .......+.+|. .+++.++||||+++++++...+..|+||||++ 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999975432 122233444554 46788999999999999999999999999998 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence            58999998888899999999999999999999999999999999999999999999999999875433333345567999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......+|+..+..+.++|.+||++||.+||+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  240 (321)
T cd05603         161 EYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLG  240 (321)
T ss_pred             ccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCC
Confidence            99999999998999999999999999999999999999998888888888888888899999999999999999999997


Q ss_pred             H----HHHhcCcccCcccchh
Q psy18060        362 W----PELLHHPLVKDNLSSE  378 (549)
Q Consensus       362 ~----~elL~Hpw~~~~~~~~  378 (549)
                      +    .++++||||.......
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~  261 (321)
T cd05603         241 AKADFLEIKNHVFFSPINWDD  261 (321)
T ss_pred             CCCCHHHHhCCCCcCCCCHHH
Confidence            6    5999999998755443


No 85 
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00  E-value=3e-45  Score=385.87  Aligned_cols=255  Identities=27%  Similarity=0.417  Sum_probs=218.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----EEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----EFV  194 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~  194 (549)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++...+     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478899999999999999999999999999998654444445567889999999999999999999988776     789


Q ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-cc
Q psy18060        195 LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-HM  273 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-~~  273 (549)
                      +||||+.++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus        81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~  160 (372)
T cd07853          81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH  160 (372)
T ss_pred             EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcccc
Confidence            99999999999999888889999999999999999999999999999999999999999999999999997654322 22


Q ss_pred             ccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---------------------
Q psy18060        274 LTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT---------------------  331 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~---------------------  331 (549)
                      .+...+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+.......+..                     
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~  240 (372)
T cd07853         161 MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI  240 (372)
T ss_pred             CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHH
Confidence            3445689999999998764 589999999999999999999999988776655544321                     


Q ss_pred             --CCC---------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        332 --QDV---------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       332 --~~~---------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                        ...         .++...++++.+||.+||+.||.+|||+.|+++||||...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence              111         1223468899999999999999999999999999999874


No 86 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00  E-value=3.1e-45  Score=394.51  Aligned_cols=251  Identities=31%  Similarity=0.471  Sum_probs=209.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|.+....      ....+|+.+++.++||||+++++++...      
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence            3467999999999999999999999999999999885432      2235799999999999999998876332      


Q ss_pred             --CEEEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeeccc
Q psy18060        191 --NEFVLITEFAHMSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGF  263 (549)
Q Consensus       191 --~~~~iV~E~~~gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGl  263 (549)
                        ..+++||||++++|.+++..    ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus       138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence              24679999999998887753    46799999999999999999999999999999999999998665 799999999


Q ss_pred             ceecccCcccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------
Q psy18060        264 ARSMAVGTHMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ----------  332 (549)
Q Consensus       264 a~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~----------  332 (549)
                      |+...... ......||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.+....+..+...          
T Consensus       218 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        218 AKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             chhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            98765432 2345678999999999865 46999999999999999999999999987665444433210          


Q ss_pred             -------CC------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        333 -------DV------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       333 -------~~------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                             ..            .+|...|+++.+||.+||++||.+|||+.|+|+||||.+.
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence                   01            1344578899999999999999999999999999999754


No 87 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=100.00  E-value=4.2e-45  Score=385.05  Aligned_cols=258  Identities=26%  Similarity=0.459  Sum_probs=221.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..++|++.+.||+|+||.||++.+..+++.+|+|++.+... .......+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            34679999999999999999999999999999999975322 22234567889999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-c
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-M  273 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~  273 (549)
                      ||||+. |+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|........ .
T Consensus       121 v~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         121 VMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence            999997 5899988654 689999999999999999999999999999999999999999999999999987643222 2


Q ss_pred             ccccCCCCcccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCc--cCCHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAER----PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS--QVSETYK  345 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~----~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~~  345 (549)
                      ..+.+||+.|+|||++.+.    .++.++|||||||++|+|++|+.||.+.+.......+....  +.+|.  .+++.++
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~  279 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAK  279 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHH
Confidence            2456799999999999654    37899999999999999999999999988887777776533  44554  4699999


Q ss_pred             HHHHHhchhCcCC--CCCHHHHhcCcccCccc
Q psy18060        346 DLVKGLLEKDASQ--RLSWPELLHHPLVKDNL  375 (549)
Q Consensus       346 dlI~~~L~~dP~~--Rps~~elL~Hpw~~~~~  375 (549)
                      ++|.+||+.+|.+  |+|+.|+++||||+...
T Consensus       280 ~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         280 NLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             HHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence            9999999865543  89999999999998643


No 88 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00  E-value=6e-45  Score=368.28  Aligned_cols=251  Identities=29%  Similarity=0.462  Sum_probs=208.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc---CCCCeeEEEEEEee-----CC
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL---AHPNIIKFIASHET-----LN  191 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~-----~~  191 (549)
                      +|++.+.||+|+||.||+|.++.+++.||+|.+..............+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            58899999999999999999999999999999875432222223445677766655   79999999998754     34


Q ss_pred             EEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc
Q psy18060        192 EFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV  269 (549)
Q Consensus       192 ~~~iV~E~~~gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~  269 (549)
                      .++++||++.++|.+++...  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~  160 (288)
T cd07863          81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC  160 (288)
T ss_pred             eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence            58999999999999998764  3589999999999999999999999999999999999999999999999999976643


Q ss_pred             CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----------C----
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-----------V----  334 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-----------~----  334 (549)
                      . ...+...||+.|+|||++.+..++.++|||||||++|+|++|++||.+.........+....           .    
T Consensus       161 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07863         161 Q-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPR  239 (288)
T ss_pred             c-ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccc
Confidence            3 22344578999999999998899999999999999999999999998876655544432100           0    


Q ss_pred             ------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 ------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 ------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                  ...+.+++.+.++|.+||++||.+|||+.|++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         240 GAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                        0113467889999999999999999999999999998


No 89 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=1.5e-44  Score=374.58  Aligned_cols=254  Identities=25%  Similarity=0.442  Sum_probs=219.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++++.||+|+||.||++.+..++..+|+|.+... ........+.+|+++++.++||||+++++++...+.+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence            46799999999999999999999999999999998753 23444567899999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      ||+. ++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+||+|||+++.....  ...
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~  160 (331)
T cd06649          83 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MAN  160 (331)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--ccc
Confidence            9998 58999999888899999999999999999999986 6999999999999999999999999998765432  234


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-------------------------
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLK-------------------------  330 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~-------------------------  330 (549)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+.                         
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence            5579999999999999899999999999999999999999997765544332211                         


Q ss_pred             ---------------------cC-CCCCC-ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        331 ---------------------TQ-DVTFP-SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       331 ---------------------~~-~~~~p-~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                           .. ....+ ..+++++++||.+||++||++|||+.++++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                                 11 01111 2468899999999999999999999999999999754


No 90 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00  E-value=2.4e-45  Score=379.97  Aligned_cols=258  Identities=28%  Similarity=0.458  Sum_probs=223.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            368999999999999999999999999999999976432 2334567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cc
Q psy18060        198 EFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-ML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~  274 (549)
                      ||+. |+|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........ ..
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            9997 6899999876 6899999999999999999999999999999999999999999999999999987654322 22


Q ss_pred             cccCCCCccccccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCC--ccCCHHH
Q psy18060        275 TSIKGTPLYMAPELIA------ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFP--SQVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~------~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p--~~~s~~~  344 (549)
                      ....||+.|+|||++.      +..++.++|||||||++|+|++|+.||...+.......+....  ..+|  ..+++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDF  240 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHH
Confidence            3457999999999986      4568899999999999999999999999888777777665432  2334  3579999


Q ss_pred             HHHHHHhchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        345 KDLVKGLLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       345 ~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      .+||.+||+ +|.+|||++++++||||......
T Consensus       241 ~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~  272 (330)
T cd05601         241 LDLIQSLLC-GQKERLGYEGLCCHPFFSKIDWN  272 (330)
T ss_pred             HHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence            999999998 99999999999999999875443


No 91 
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=8.8e-45  Score=381.11  Aligned_cols=255  Identities=28%  Similarity=0.438  Sum_probs=215.9

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            46789999999999999999999999999999999976544445556778899999999999999999887543      


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ..+|+||||++++|.+.+..  .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  179 (364)
T cd07875         102 QDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  179 (364)
T ss_pred             CeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence            35799999999999888854  5889999999999999999999999999999999999999999999999999765433


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV----------------  334 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~----------------  334 (549)
                       ...+...||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+.....                
T Consensus       180 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (364)
T cd07875         180 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRT  258 (364)
T ss_pred             -CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHH
Confidence             223455799999999999999999999999999999999999999988776555444322100                


Q ss_pred             ------C--------------C------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        335 ------T--------------F------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       335 ------~--------------~------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                            .              +      +...+..+++||.+||+.||.+|||+.|+|+||||...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             HHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                  0              0      01135678999999999999999999999999999754


No 92 
>KOG0986|consensus
Probab=100.00  E-value=1.1e-46  Score=382.27  Aligned_cols=284  Identities=27%  Similarity=0.406  Sum_probs=253.3

Q ss_pred             CCCccccCCCccccccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcC
Q psy18060         98 GEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLA  176 (549)
Q Consensus        98 g~p~~~~~~~~~~~~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~  176 (549)
                      .+.++++.+|+.+++......+.|...++||+||||.|+-|+.+.||+.||.|.+.+.... .......++|-+|+++++
T Consensus       164 ~S~yf~rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~  243 (591)
T KOG0986|consen  164 ESDYFTRFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS  243 (591)
T ss_pred             HHHHHHHHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc
Confidence            3455678889999999888889999999999999999999999999999999988664321 223356688999999999


Q ss_pred             CCCeeEEEEEEeeCCEEEEEEecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC
Q psy18060        177 HPNIIKFIASHETLNEFVLITEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD  253 (549)
Q Consensus       177 hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~  253 (549)
                      .|.||.+-..|++.+.+++||..++ |+|.-+|-+.+  .|+|..+..++.+|+.||++||+++||.|||||+|||+|+.
T Consensus       244 s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~  323 (591)
T KOG0986|consen  244 SPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDH  323 (591)
T ss_pred             cCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccC
Confidence            9999999999999999999999998 58999988765  89999999999999999999999999999999999999999


Q ss_pred             CcEEEeecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC----CHHHHHHHH
Q psy18060        254 GVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLL  329 (549)
Q Consensus       254 g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~----~~~~~~~~i  329 (549)
                      |+|+|+|+|+|..+..+ ...+..+||.+|||||++.+..|+..+|+|||||++|||+.|+.||...    ..+++-+++
T Consensus       324 GhvRISDLGLAvei~~g-~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~  402 (591)
T KOG0986|consen  324 GHVRISDLGLAVEIPEG-KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRT  402 (591)
T ss_pred             CCeEeeccceEEecCCC-CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHH
Confidence            99999999999888655 4556679999999999999999999999999999999999999999754    345677778


Q ss_pred             hcCCCCCCccCCHHHHHHHHHhchhCcCCCCC-----HHHHhcCcccCcccchhhhhc
Q psy18060        330 KTQDVTFPSQVSETYKDLVKGLLEKDASQRLS-----WPELLHHPLVKDNLSSEIESQ  382 (549)
Q Consensus       330 ~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps-----~~elL~Hpw~~~~~~~~~~~~  382 (549)
                      .+.+..+|..+|++++++.+.+|++||.+|+.     ++++.+||||++..+..++..
T Consensus       403 ~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleag  460 (591)
T KOG0986|consen  403 LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAG  460 (591)
T ss_pred             hcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhcc
Confidence            88888999999999999999999999999985     579999999999877766544


No 93 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00  E-value=1.8e-45  Score=380.99  Aligned_cols=252  Identities=31%  Similarity=0.518  Sum_probs=218.2

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc---CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL---AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      ||+|+||.||+|.+..+++.||+|++.+... ..........|..++...   .||||+++++++...+.+|+||||+. 
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999999999999999999865322 122233445566676655   69999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      |+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            58999999888999999999999999999999999999999999999999999999999999876543333445678999


Q ss_pred             cccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc-cCCHHHHHHHHHhchhCcCCC
Q psy18060        282 LYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS-QVSETYKDLVKGLLEKDASQR  359 (549)
Q Consensus       282 ~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~-~~s~~~~dlI~~~L~~dP~~R  359 (549)
                      .|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+..+...+|. .+++++.+||.+||.+||.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHC
Confidence            99999998754 5899999999999999999999999999888888888877777775 479999999999999999999


Q ss_pred             C----CHHHHhcCcccCcccchh
Q psy18060        360 L----SWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       360 p----s~~elL~Hpw~~~~~~~~  378 (549)
                      |    ++.++++||||.+..+..
T Consensus       241 ~~~~~~~~~ll~h~~~~~~~~~~  263 (330)
T cd05586         241 LGAHRDAVELKEHPFFADIDWDL  263 (330)
T ss_pred             CCCCCCHHHHhcCccccCCCHHH
Confidence            8    689999999998765433


No 94 
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00  E-value=9.4e-45  Score=379.43  Aligned_cols=256  Identities=27%  Similarity=0.428  Sum_probs=215.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            46889999999999999999999999999999999976554455556778899999999999999999987543      


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ...|+||||++++|.+.+..  .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~  172 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  172 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence            35799999999998888754  5889999999999999999999999999999999999999999999999999765433


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT-------------------  331 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~-------------------  331 (549)
                       .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..                   
T Consensus       173 -~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (355)
T cd07874         173 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_pred             -cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHH
Confidence             223456799999999999999999999999999999999999999987764433322110                   


Q ss_pred             ---CC-----CC---------------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        332 ---QD-----VT---------------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       332 ---~~-----~~---------------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                         ..     ..               .+...+..+++||.+||+.||.+|||+.|+|+||||....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence               00     00               1122456789999999999999999999999999997543


No 95 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=100.00  E-value=2.4e-44  Score=364.88  Aligned_cols=259  Identities=25%  Similarity=0.411  Sum_probs=221.9

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-HHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|++.+.||+|+||.||++.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+...+.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4889999999999999999999999999999987543222 223456789999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |+. |+|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||+++...... ...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~  159 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE-TIR  159 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-ccc
Confidence            997 5898887653  469999999999999999999999999999999999999999999999999997754332 224


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcCCCCCCccCCHHHHHHHHHh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH----LIRLLKTQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~----~~~~i~~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ...||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.+...    ....+......+|..+++.+.+||.+|
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05605         160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQL  239 (285)
T ss_pred             cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHH
Confidence            4579999999999998889999999999999999999999998765433    233344445566778999999999999


Q ss_pred             chhCcCCCC-----CHHHHhcCcccCcccchhh
Q psy18060        352 LEKDASQRL-----SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       352 L~~dP~~Rp-----s~~elL~Hpw~~~~~~~~~  379 (549)
                      |..||.+||     +++++++||||........
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~  272 (285)
T cd05605         240 LTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRL  272 (285)
T ss_pred             ccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHH
Confidence            999999999     8999999999987655544


No 96 
>PTZ00284 protein kinase; Provisional
Probab=100.00  E-value=1.8e-44  Score=391.50  Aligned_cols=253  Identities=26%  Similarity=0.420  Sum_probs=207.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCC------CCeeEEEEEEeeC-
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH------PNIIKFIASHETL-  190 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h------pnIv~l~~~~~~~-  190 (549)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++....   ........|+++++.+.|      ++++++++++... 
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            478999999999999999999999999999999996432   223345667777777654      4588888888654 


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCC---------------
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDG---------------  254 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g---------------  254 (549)
                      ..+++||++++++|.+++.+++.+++..++.++.||+.||+|||+ .|||||||||+|||++.++               
T Consensus       205 ~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        205 GHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             ceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            578999999999999999988899999999999999999999998 5999999999999998765               


Q ss_pred             -cEEEeecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Q psy18060        255 -VAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD  333 (549)
Q Consensus       255 -~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~  333 (549)
                       .+||+|||.+....   ...+..+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+....+....
T Consensus       285 ~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~  361 (467)
T PTZ00284        285 CRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL  361 (467)
T ss_pred             ceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence             49999999875432   23356789999999999999999999999999999999999999998877655444332211


Q ss_pred             CCCCc------------------------------------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        334 VTFPS------------------------------------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       334 ~~~p~------------------------------------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ..+|.                                          ..++.+.+||.+||+.||.+|||++|+|+||||
T Consensus       362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~  441 (467)
T PTZ00284        362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV  441 (467)
T ss_pred             CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence            11110                                          013567799999999999999999999999999


Q ss_pred             Ccccc
Q psy18060        372 KDNLS  376 (549)
Q Consensus       372 ~~~~~  376 (549)
                      .....
T Consensus       442 ~~~~~  446 (467)
T PTZ00284        442 LKYYP  446 (467)
T ss_pred             cccCC
Confidence            86543


No 97 
>KOG0690|consensus
Probab=100.00  E-value=2.4e-46  Score=366.18  Aligned_cols=264  Identities=29%  Similarity=0.473  Sum_probs=245.0

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..+++|..+++||+|.||+|-+|+.+.+++.||+|++++.- ....+...-..|-++|+..+||.+..+..+|+..++++
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence            36789999999999999999999999999999999998754 34555667778899999999999999999999999999


Q ss_pred             EEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||++| .|.-+|.+.+.|+|..++.+-..|+.||.|||+++||.||||.+|+|+|.+|++||+|||+++.--.....
T Consensus       245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t  324 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT  324 (516)
T ss_pred             EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccce
Confidence            99999985 79999999899999999999999999999999999999999999999999999999999999765555566


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhch
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..++||||.|.|||++....|+.++|+|.+||++|||++|+.||...+...+.+.|....+.||..++++++.|+..+|.
T Consensus       325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~  404 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLK  404 (516)
T ss_pred             eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhh
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCcCCCCC-----HHHHhcCcccCcccchhh
Q psy18060        354 KDASQRLS-----WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       354 ~dP~~Rps-----~~elL~Hpw~~~~~~~~~  379 (549)
                      +||.+|+.     +.||.+|+||....+...
T Consensus       405 kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~  435 (516)
T KOG0690|consen  405 KDPKKRLGGGPDDAKEIMRHRFFASVDWEAT  435 (516)
T ss_pred             cChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence            99999986     789999999998766544


No 98 
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00  E-value=7.8e-45  Score=360.62  Aligned_cols=251  Identities=36%  Similarity=0.603  Sum_probs=216.7

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |++.+.||+|+||+||++.+..+++.||+|++..............+|+.+++.++||||+++++++......+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            78999999999999999999999999999999876544444444566999999999999999999999999999999999


Q ss_pred             CC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCC
Q psy18060        201 HM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       201 ~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      .+ +|.+++...+.+++..+..++.||+.||.+||++||+||||||+||+++.++.++|+|||.+..............+
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  160 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVG  160 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            97 99999998889999999999999999999999999999999999999999999999999999764333334456679


Q ss_pred             CCccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCCCCC----ccCCHHHHHHHHHh
Q psy18060        280 TPLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI---LHLIRLLKTQDVTFP----SQVSETYKDLVKGL  351 (549)
Q Consensus       280 T~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~---~~~~~~i~~~~~~~p----~~~s~~~~dlI~~~  351 (549)
                      |+.|+|||++. +..++.++||||||+++|+|++|..||.....   ..............+    ...++.+.++|.+|
T Consensus       161 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  240 (260)
T PF00069_consen  161 TPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKM  240 (260)
T ss_dssp             SGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHH
Confidence            99999999998 88899999999999999999999999998733   333333222211111    12248999999999


Q ss_pred             chhCcCCCCCHHHHhcCccc
Q psy18060        352 LEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~  371 (549)
                      |+.||.+|||+.++++||||
T Consensus       241 l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  241 LSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SSSSGGGSTTHHHHHTSGGG
T ss_pred             ccCChhHCcCHHHHhcCCCC
Confidence            99999999999999999997


No 99 
>KOG0574|consensus
Probab=100.00  E-value=1.5e-47  Score=371.10  Aligned_cols=257  Identities=32%  Similarity=0.554  Sum_probs=233.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +-|.++.+||+|+||.||++.++.+|+.+|||.+...    ..++.+.+|+.|+++.+.|++|++|+++.....++||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence            4488999999999999999999999999999998653    456788999999999999999999999998899999999


Q ss_pred             cCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+ |+..+.++. +++++|.++..+++..+.||+|||...-||||||..|||++.+|..||+|||.|..+.......++
T Consensus       109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNT  188 (502)
T KOG0574|consen  109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNT  188 (502)
T ss_pred             hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCc
Confidence            999 899999986 467999999999999999999999999999999999999999999999999999877665566688


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCccCCHHHHHHHHHhch
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---FPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~dlI~~~L~  353 (549)
                      ..|||.|||||++..-.|+.++||||||++..||.-|++||....+...+-.|.+.+++   -|..||.++.|||++||.
T Consensus       189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLi  268 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLI  268 (502)
T ss_pred             cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999998888887777766543   245689999999999999


Q ss_pred             hCcCCCCCHHHHhcCcccCcccchhh
Q psy18060        354 KDASQRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      ++|++|.|+.++++|||+++...-.+
T Consensus       269 K~PE~R~TA~~L~~H~FiknA~g~~I  294 (502)
T KOG0574|consen  269 KKPEERKTALRLCEHTFIKNAPGCDI  294 (502)
T ss_pred             CCHHHHHHHHHHhhhhhhcCCCcccH
Confidence            99999999999999999998755443


No 100
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00  E-value=2.5e-44  Score=379.20  Aligned_cols=259  Identities=27%  Similarity=0.443  Sum_probs=221.2

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.+... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  119 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            345789999999999999999999999999999999875321 2223456788999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-c
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-H  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-~  272 (549)
                      +||||++ |+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...... .
T Consensus       120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~  198 (371)
T cd05622         120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  198 (371)
T ss_pred             EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence            9999997 589998865 468999999999999999999999999999999999999999999999999998764322 1


Q ss_pred             cccccCCCCcccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCC--ccCCHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAER----PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFP--SQVSETY  344 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~----~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p--~~~s~~~  344 (549)
                      .....+||+.|+|||++.+.    .++.++|||||||++|+|++|..||...+.......+....  ..+|  ..+++.+
T Consensus       199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  278 (371)
T cd05622         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA  278 (371)
T ss_pred             cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHH
Confidence            23456799999999998653    37899999999999999999999999998888887776543  3344  3689999


Q ss_pred             HHHHHHhchhCcCC--CCCHHHHhcCcccCccc
Q psy18060        345 KDLVKGLLEKDASQ--RLSWPELLHHPLVKDNL  375 (549)
Q Consensus       345 ~dlI~~~L~~dP~~--Rps~~elL~Hpw~~~~~  375 (549)
                      +++|.+||..+|.+  |++++++++||||++..
T Consensus       279 ~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         279 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             HHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence            99999999844433  78999999999998753


No 101
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=100.00  E-value=1.3e-44  Score=376.41  Aligned_cols=255  Identities=30%  Similarity=0.493  Sum_probs=213.8

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ..++|++++.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            35789999999999999999999999999999999876443333445677899999999999999999877533      


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ...|++|++++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        93 ~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~  171 (343)
T cd07878          93 NEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE  171 (343)
T ss_pred             CcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence            4579999999999988775 457999999999999999999999999999999999999999999999999999865432


Q ss_pred             cccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD----------------  333 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~----------------  333 (549)
                         .+...||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+....                
T Consensus       172 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07878         172 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA  248 (343)
T ss_pred             ---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence               345679999999999876 568999999999999999999999998876554444332110                


Q ss_pred             -------CCCC--------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        334 -------VTFP--------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       334 -------~~~p--------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                             ...|        ...++.+.+||.+||..||.+|||+.|++.||||....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence                   0011        13567789999999999999999999999999998643


No 102
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00  E-value=6.3e-44  Score=364.16  Aligned_cols=258  Identities=29%  Similarity=0.487  Sum_probs=218.1

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..+++|.+.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+|+.+++.++||||+++++++...+..++
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence            3567899999999999999999999999999999998654322 223456789999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        82 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  161 (301)
T cd07873          82 VFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  161 (301)
T ss_pred             EEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc
Confidence            9999999999988764 568999999999999999999999999999999999999999999999999997654433333


Q ss_pred             cccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------CC
Q psy18060        275 TSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------DV  334 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~~  334 (549)
                      ....+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+....+...                   ..
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (301)
T cd07873         162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSY  241 (301)
T ss_pred             cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccc
Confidence            44567899999999865 45789999999999999999999999987765554332210                   00


Q ss_pred             CCC-----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        335 TFP-----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       335 ~~p-----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ..|           ..+++.+++||.+||+.||.+|||++|+++||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            111           2468899999999999999999999999999999754


No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00  E-value=8.6e-44  Score=369.09  Aligned_cols=261  Identities=26%  Similarity=0.442  Sum_probs=219.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+.. ........+.+|+.++..++||||+++++++...+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46999999999999999999999999999999997532 22234456788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cc
Q psy18060        198 EFAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-ML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~  274 (549)
                      ||+. |+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++........ ..
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            9986 689999976 46799999999999999999999999999999999999999999999999999876643322 12


Q ss_pred             cccCCCCcccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCC---ccCCHHH
Q psy18060        275 TSIKGTPLYMAPELIAE-----RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFP---SQVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p---~~~s~~~  344 (549)
                      ....||+.|+|||++..     ..++.++|||||||++|+|++|+.||...+..+....+....  ..+|   ..+++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEA  240 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHH
Confidence            23469999999999863     457889999999999999999999999888777776665432  2333   3479999


Q ss_pred             HHHHHHhchhCcC--CCCCHHHHhcCcccCcccchhh
Q psy18060        345 KDLVKGLLEKDAS--QRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       345 ~dlI~~~L~~dP~--~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      +++|.+||..++.  .|+++.++++||||.+..+...
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~~~  277 (331)
T cd05597         241 KDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDWDNI  277 (331)
T ss_pred             HHHHHHHccCcccccCCCCHHHHhcCCCCCCCCHHHH
Confidence            9999999876444  3889999999999987644333


No 104
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00  E-value=7.5e-44  Score=359.40  Aligned_cols=252  Identities=31%  Similarity=0.471  Sum_probs=213.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+............+.+|+.+++.+.||||+++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            48899999999999999999999999999999875443333446678899999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AHMSLSNLLEQR---KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~gsL~~~l~~~---~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      +.++|.+++...   ..+++..++.++.||+.||+|||++||+||||||+||+++.+|.++|+|||++............
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTH  160 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccC
Confidence            999999888653   46899999999999999999999999999999999999999999999999999766544333344


Q ss_pred             cCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----------------------
Q psy18060        277 IKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-----------------------  332 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-----------------------  332 (549)
                      ..+++.|+|||++.+ ..++.++|||||||++|+|+||++||.+.+.......+...                       
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (285)
T cd07861         161 EVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP  240 (285)
T ss_pred             CcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhcc
Confidence            567899999998865 45789999999999999999999999876543322211100                       


Q ss_pred             C------CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        333 D------VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       333 ~------~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      .      ......+++++.++|.+||+.||.+|||+.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         241 KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            0      00123478999999999999999999999999999997


No 105
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00  E-value=2.1e-43  Score=350.45  Aligned_cols=252  Identities=30%  Similarity=0.529  Sum_probs=221.7

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-CCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-LNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iV~E  198 (549)
                      .|++.+.||+|++|.||++.+..+++.+|+|.+............+.+|+.+++.++|||++++++.+.. ...++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4899999999999999999999999999999997655555566778999999999999999999988764 446899999


Q ss_pred             cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |++ ++|.+++...  ..+++.++..++.|++.||.+||++||+||||||+||+++.++.++|+|||++...........
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            997 5899998763  4589999999999999999999999999999999999999999999999999987654433445


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhchh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L~~  354 (549)
                      ...|++.|+|||++.+..++.++|||||||++++|++|+.||...+.......+..+.. ..|..+++.+.+++.+||+.
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  240 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSK  240 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhcc
Confidence            56789999999999999999999999999999999999999998877666665555443 45667899999999999999


Q ss_pred             CcCCCCCHHHHhcCccc
Q psy18060        355 DASQRLSWPELLHHPLV  371 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~  371 (549)
                      +|.+|||+.++++||||
T Consensus       241 ~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         241 RPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999997


No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00  E-value=8.8e-44  Score=388.42  Aligned_cols=262  Identities=26%  Similarity=0.427  Sum_probs=228.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC---
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN---  191 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~---  191 (549)
                      ....++|.+.+.||+|+||.||+|.+..+++.||+|++.....+......+.+|+.++..++|+||++++..+...+   
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            33457899999999999999999999999999999999876666666778889999999999999999987764322   


Q ss_pred             -----EEEEEEecCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeec
Q psy18060        192 -----EFVLITEFAH-MSLSNLLEQR----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDF  261 (549)
Q Consensus       192 -----~~~iV~E~~~-gsL~~~l~~~----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DF  261 (549)
                           .+++||||+. |+|.+++..+    ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF  187 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF  187 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence                 3689999998 6999998753    46899999999999999999999999999999999999999999999999


Q ss_pred             ccceecccC--cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCc
Q psy18060        262 GFARSMAVG--THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPS  338 (549)
Q Consensus       262 Gla~~~~~~--~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~  338 (549)
                      |+++.....  .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..+.. .+|+
T Consensus       188 Gls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  267 (496)
T PTZ00283        188 GFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPP  267 (496)
T ss_pred             ccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            999765432  1223456799999999999999999999999999999999999999999888877777665543 4678


Q ss_pred             cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        339 QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       339 ~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      .+++++.+++.+||+.||.+||++.++++|||++....
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~  305 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS  305 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence            89999999999999999999999999999999876543


No 107
>KOG0667|consensus
Probab=100.00  E-value=1.6e-44  Score=383.72  Aligned_cols=251  Identities=29%  Similarity=0.475  Sum_probs=217.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-C-----CCeeEEEEEEeeCC
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-H-----PNIIKFIASHETLN  191 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-h-----pnIv~l~~~~~~~~  191 (549)
                      -.+|.+++.||+|+||.|-+|.+..|++.||||++++.   ..-......|+.||..|+ |     -|+|+++++|...+
T Consensus       185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~  261 (586)
T KOG0667|consen  185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN  261 (586)
T ss_pred             EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence            34899999999999999999999999999999999754   334566678999999996 3     38999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC--cEEEeecccceec
Q psy18060        192 EFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG--VAMLCDFGFARSM  267 (549)
Q Consensus       192 ~~~iV~E~~~gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g--~vKL~DFGla~~~  267 (549)
                      ++|||+|++..+|.++|+.++  +|+...++.|+.||+.||..||+.||||+|||||||||.+.+  .|||+|||+|+..
T Consensus       262 HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  262 HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            999999999999999999864  689999999999999999999999999999999999997654  7999999999876


Q ss_pred             ccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---------------
Q psy18060        268 AVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---------------  332 (549)
Q Consensus       268 ~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---------------  332 (549)
                      ...   ..+.+.+.+|+|||++.+.+|+.+.||||||||++||++|.+.|++.+..+++..|..-               
T Consensus       342 ~q~---vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~  418 (586)
T KOG0667|consen  342 SQR---VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKA  418 (586)
T ss_pred             CCc---ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcccc
Confidence            532   34778899999999999999999999999999999999999999998887777766310               


Q ss_pred             -------------------------------------CCCCCc-----------cCCHHHHHHHHHhchhCcCCCCCHHH
Q psy18060        333 -------------------------------------DVTFPS-----------QVSETYKDLVKGLLEKDASQRLSWPE  364 (549)
Q Consensus       333 -------------------------------------~~~~p~-----------~~s~~~~dlI~~~L~~dP~~Rps~~e  364 (549)
                                                           ....|+           .-...+.+||++||..||..|+|+.|
T Consensus       419 ~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~q  498 (586)
T KOG0667|consen  419 HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQ  498 (586)
T ss_pred             ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHH
Confidence                                                 000110           11346789999999999999999999


Q ss_pred             HhcCcccCcc
Q psy18060        365 LLHHPLVKDN  374 (549)
Q Consensus       365 lL~Hpw~~~~  374 (549)
                      +|+||||+..
T Consensus       499 al~Hpfl~~~  508 (586)
T KOG0667|consen  499 ALNHPFLTGT  508 (586)
T ss_pred             HhcCcccccc
Confidence            9999999853


No 108
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00  E-value=2.3e-43  Score=349.61  Aligned_cols=252  Identities=29%  Similarity=0.479  Sum_probs=225.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|.+.+.||+|++|.||+|.+..+++.|++|.+............+.+|+++++.++||||+++++.+...+..+++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            47889999999999999999999999999999976555566677889999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      +. ++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++...........
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            87 5899999774  57899999999999999999999999999999999999999999999999999876554433445


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhchhC
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L~~d  355 (549)
                      ..|++.|+|||++.+..++.++|+|||||++++|++|+.||...+.......+..+.. .++..+++.+.++|.+||+.+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKD  240 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCC
Confidence            6789999999999998899999999999999999999999998887777776665543 344578999999999999999


Q ss_pred             cCCCCCHHHHhcCccc
Q psy18060        356 ASQRLSWPELLHHPLV  371 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~  371 (549)
                      |++||++.++++|||+
T Consensus       241 p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         241 YRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999996


No 109
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00  E-value=1.6e-43  Score=359.21  Aligned_cols=259  Identities=31%  Similarity=0.516  Sum_probs=233.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+++.+|+|.+.+... .......+.+|+++++.+.||||+++++++...+.+++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            468999999999999999999999999999999875432 2234567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||+|+|||++.+|.+||+|||+++.....   ...
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~  157 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYT  157 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCC
Confidence            9995 799999999889999999999999999999999999999999999999999999999999999776533   244


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      ..|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.......+..+...+|..+++.++++|.+||+.||
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCH
Confidence            57899999999998888899999999999999999999999988887777777777888888999999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccCcccchhhh
Q psy18060        357 SQRL-----SWPELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       357 ~~Rp-----s~~elL~Hpw~~~~~~~~~~  380 (549)
                      .+|+     +++|+++||||....+....
T Consensus       238 ~~R~~~~~~~~~~l~~~~~~~~~~~~~~~  266 (290)
T cd05580         238 TKRLGNLKNGVNDIKNHPWFAGIDWIALL  266 (290)
T ss_pred             HHccCcccCCHHHHHcCcccccCCHHHHh
Confidence            9999     89999999999876654443


No 110
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00  E-value=2.8e-44  Score=362.61  Aligned_cols=252  Identities=31%  Similarity=0.493  Sum_probs=212.1

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||+|.+..+|+.+|+|.+............+.+|+.+++.++||||+++++++.+.+.+++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            58899999999999999999999999999999976443333345677899999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      ++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.............
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (284)
T cd07839          81 CDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEV  160 (284)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCc
Confidence            99999988865 56799999999999999999999999999999999999999999999999999986654433344556


Q ss_pred             CCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHhcC----------------C----C--
Q psy18060        279 GTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPF-KTVSILHLIRLLKTQ----------------D----V--  334 (549)
Q Consensus       279 GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf-~~~~~~~~~~~i~~~----------------~----~--  334 (549)
                      +++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+.......+...                .    .  
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07839         161 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMY  240 (284)
T ss_pred             cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCC
Confidence            89999999998664 4789999999999999999998885 444443333332110                0    0  


Q ss_pred             -------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 -------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 -------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                             ...+.+++++.++|.+||+.||.+|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                   0113468899999999999999999999999999997


No 111
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00  E-value=1.9e-43  Score=352.02  Aligned_cols=253  Identities=29%  Similarity=0.514  Sum_probs=221.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS---GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ++|.+.+.||+|++|.||+|.+..+++.+|+|.+......   ......+.+|++++++++||||+++++++...+.+++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4689999999999999999999999999999998754322   2234578899999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ++|++. ++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++.........
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999997 5899999988889999999999999999999999999999999999999999999999999997654322111


Q ss_pred             ---cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHH
Q psy18060        275 ---TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDLVK  349 (549)
Q Consensus       275 ---~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dlI~  349 (549)
                         ....|+..|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...  ...+|..+++.+.++|.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  241 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLR  241 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHH
Confidence               3356889999999999988999999999999999999999999877665555444333  34567788999999999


Q ss_pred             HhchhCcCCCCCHHHHhcCccc
Q psy18060        350 GLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       350 ~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +||..+|.+|||+.++++||||
T Consensus       242 ~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         242 RTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999997


No 112
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00  E-value=1.1e-43  Score=368.24  Aligned_cols=261  Identities=26%  Similarity=0.441  Sum_probs=221.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+++.+|+|++.+... .......+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            468999999999999999999999999999999865321 2223445788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cc
Q psy18060        198 EFAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-ML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~  274 (549)
                      ||+. |+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            9987 689999987 46799999999999999999999999999999999999999999999999999876533222 22


Q ss_pred             cccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCC---ccCCHHH
Q psy18060        275 TSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFP---SQVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p---~~~s~~~  344 (549)
                      ...+||+.|+|||++.     ...++.++|||||||++|||++|+.||...+.......+....  ..+|   ..+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~  240 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDA  240 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHH
Confidence            3457999999999985     3568899999999999999999999999998888887776543  2333   3579999


Q ss_pred             HHHHHHhchhCcCC--CCCHHHHhcCcccCcccchhh
Q psy18060        345 KDLVKGLLEKDASQ--RLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       345 ~dlI~~~L~~dP~~--Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      ++||.+||..+|.+  |+++.++++||||.+.....+
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~~~~  277 (332)
T cd05623         241 KDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDWDNI  277 (332)
T ss_pred             HHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCHHHH
Confidence            99999999765544  789999999999987654433


No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00  E-value=6.4e-44  Score=373.18  Aligned_cols=255  Identities=28%  Similarity=0.453  Sum_probs=213.1

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ....+|+.++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+++++.++||||+++++++...+.+++
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  149 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV  149 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence            34677899999999999999999999999999999986532 33345678899999999999999999999999999999


Q ss_pred             EEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||||+.+ +|.+    ....++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus       150 v~e~~~~~~L~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~  225 (353)
T PLN00034        150 LLEFMDGGSLEG----THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC  225 (353)
T ss_pred             EEecCCCCcccc----cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccc
Confidence            9999985 6653    3456788889999999999999999999999999999999999999999999998765443334


Q ss_pred             cccCCCCcccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHh-cCCCCCCccCCHHHH
Q psy18060        275 TSIKGTPLYMAPELIAE-----RPYDHTADLWSLGCIAYEIHMGHPPFKTVSI---LHLIRLLK-TQDVTFPSQVSETYK  345 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~---~~~~~~i~-~~~~~~p~~~s~~~~  345 (549)
                      ....||+.|+|||++..     ...+.++|||||||++|+|++|+.||.....   ......+. ......+..++++++
T Consensus       226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  305 (353)
T PLN00034        226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFR  305 (353)
T ss_pred             cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHH
Confidence            55679999999998843     2345689999999999999999999974332   22222222 233445678899999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      +||.+||+.||.+|||+.|+++||||....
T Consensus       306 ~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        306 HFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            999999999999999999999999998653


No 114
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00  E-value=1.1e-43  Score=368.36  Aligned_cols=261  Identities=26%  Similarity=0.424  Sum_probs=221.9

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+.. ........+.+|..++..+.||||+++++++...+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46999999999999999999999999999999987532 22233456788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cc
Q psy18060        198 EFAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-ML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~  274 (549)
                      ||+. |+|.+++.+ ...+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++....... ..
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            9987 689999987 46799999999999999999999999999999999999999999999999999976653322 22


Q ss_pred             cccCCCCcccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCc---cCCHHH
Q psy18060        275 TSIKGTPLYMAPELIAE-----RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--VTFPS---QVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--~~~p~---~~s~~~  344 (549)
                      ...+||+.|+|||++.+     +.++.++|||||||++|+|++|+.||...+.......+....  ..+|+   .+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~  240 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEA  240 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHH
Confidence            33579999999999865     568899999999999999999999999888877777765543  33443   468999


Q ss_pred             HHHHHHhchhCcCC--CCCHHHHhcCcccCcccchhh
Q psy18060        345 KDLVKGLLEKDASQ--RLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       345 ~dlI~~~L~~dP~~--Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      +++|.+||..++.+  |++++++++||||+...+...
T Consensus       241 ~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~~~~  277 (331)
T cd05624         241 KDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDWENI  277 (331)
T ss_pred             HHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCHHHH
Confidence            99999999876654  568999999999987654433


No 115
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=2.1e-43  Score=366.68  Aligned_cols=254  Identities=26%  Similarity=0.449  Sum_probs=216.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++...+.+++||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            367999999999999999999999999999999986542 3344567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      ||+. ++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|||++......  ...
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~  160 (333)
T cd06650          83 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MAN  160 (333)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh--ccc
Confidence            9997 59999999888899999999999999999999985 7999999999999999999999999998755322  224


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--------------------------
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL--------------------------  329 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i--------------------------  329 (549)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+                          
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
T cd06650         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSS  240 (333)
T ss_pred             cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhh
Confidence            457999999999999888999999999999999999999999765443332111                          


Q ss_pred             ------------------hcC-CCCCC-ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        330 ------------------KTQ-DVTFP-SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       330 ------------------~~~-~~~~p-~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                        ... ...++ ..++.++++||.+||++||.+|||+.|++.||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         241 YGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             hcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                              111 11111 1367899999999999999999999999999999754


No 116
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=3e-43  Score=383.02  Aligned_cols=256  Identities=29%  Similarity=0.440  Sum_probs=224.0

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCC-CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDL-KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~-~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ....|.+.+.||+|+||.||+|....+ +..+|+|.+...  .......+.+|+.+++.++|||||++++++...+.+||
T Consensus        65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l  142 (478)
T PTZ00267         65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL  142 (478)
T ss_pred             cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence            345599999999999999999998877 788999976433  23344567889999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        196 ITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ||||+. |+|.+++..    +..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence            999997 689888754    356899999999999999999999999999999999999999999999999999876433


Q ss_pred             c--ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHH
Q psy18060        271 T--HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDL  347 (549)
Q Consensus       271 ~--~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dl  347 (549)
                      .  ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+..+.. .+|..+++++.++
T Consensus       223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  302 (478)
T PTZ00267        223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKAL  302 (478)
T ss_pred             cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHH
Confidence            2  123456799999999999999999999999999999999999999999888887777765544 3567899999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      |.+||.+||.+|||+.+++.|||++..
T Consensus       303 i~~~L~~dP~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        303 LDPLLSKNPALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             HHHHhccChhhCcCHHHHHhCHHHHHH
Confidence            999999999999999999999999643


No 117
>KOG0577|consensus
Probab=100.00  E-value=3.5e-45  Score=380.16  Aligned_cols=253  Identities=33%  Similarity=0.515  Sum_probs=227.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|.-++.||.|+||.||-+++..+.+.||||.++-+. .+...++.+.+|+++|++++|||++.+-++|-.....|+|||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            3667889999999999999999999999999998665 455668899999999999999999999999999889999999


Q ss_pred             cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      ||-|+-.+++.- .+++-|.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|..+.+    .+++
T Consensus       107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----AnsF  182 (948)
T KOG0577|consen  107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----ANSF  182 (948)
T ss_pred             HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc----hhcc
Confidence            999998888875 46799999999999999999999999999999999999999999999999999977654    4778


Q ss_pred             CCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCC-ccCCHHHHHHHHHhc
Q psy18060        278 KGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFP-SQVSETYKDLVKGLL  352 (549)
Q Consensus       278 ~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p-~~~s~~~~dlI~~~L  352 (549)
                      +|||+|||||++.   .+.|+.++||||||+++.||.-.++|+.+.+-...+..|.... +.++ +.||..+..||..||
T Consensus       183 vGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CL  262 (948)
T KOG0577|consen  183 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCL  262 (948)
T ss_pred             cCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHH
Confidence            9999999999984   4789999999999999999999999999888877776665543 3444 469999999999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCcccc
Q psy18060        353 EKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ++-|..|||.+++|+|+|+.....
T Consensus       263 qKipqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  263 QKIPQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             hhCcccCCcHHHHhhcchhccCCC
Confidence            999999999999999999986543


No 118
>KOG0579|consensus
Probab=100.00  E-value=3.3e-45  Score=382.01  Aligned_cols=255  Identities=32%  Similarity=0.538  Sum_probs=226.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +.|.++..||.|+||.||+|.++.++-..|.|+|..  .+..++..+.-|+.||...+||+||++++.|...+.++|..|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            458899999999999999999999999999999854  346677888999999999999999999999988899999999


Q ss_pred             cCCCCHHH-HH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAHMSLSN-LL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~gsL~~-~l-~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+|.--+ ++ .-...+++.++..+++|++.||.|||+++|||||||..|||++.+|.++|+|||.+...........+
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence            99976444 33 34578999999999999999999999999999999999999999999999999988654444445567


Q ss_pred             cCCCCcccccccc-----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELI-----AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---FPSQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l-----~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~dlI  348 (549)
                      +.|||+|||||+.     +..+|+.++||||||++|.||..+.+|-...++..++-+|....++   -|+.|+..+.||+
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfL  269 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFL  269 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHH
Confidence            8999999999986     4578999999999999999999999999999999998888766543   4678999999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      .+||.+||..||++.++|+|||+.+..
T Consensus       270 k~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  270 KRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             HHHHhcCCccCCCHHHHhhCcccccCC
Confidence            999999999999999999999998653


No 119
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=4.3e-43  Score=372.43  Aligned_cols=251  Identities=24%  Similarity=0.377  Sum_probs=209.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEc--CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHL--DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..+|.+++.||+|+||.||+|...  .++..+|+|.+...       ....+|+++++.++||||+++++++......++
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            457999999999999999999754  34678999988643       234679999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--c
Q psy18060        196 ITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--M  273 (549)
Q Consensus       196 V~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~  273 (549)
                      +||++.++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......  .
T Consensus       164 v~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        164 VMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             EehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            99999999999998788899999999999999999999999999999999999999999999999999976543321  2


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHH----HhcCCC------------
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI---LHLIRL----LKTQDV------------  334 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~---~~~~~~----i~~~~~------------  334 (549)
                      .....||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+...   ...+..    +...+.            
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence            2345799999999999999999999999999999999999999976432   111111    111111            


Q ss_pred             -------------CCC-----ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        335 -------------TFP-----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       335 -------------~~p-----~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                                   ..|     ..++.++++||.+||+.||++|||+.|+|.||||....
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence                         111     13467889999999999999999999999999997643


No 120
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00  E-value=2.2e-43  Score=362.59  Aligned_cols=244  Identities=28%  Similarity=0.468  Sum_probs=194.6

Q ss_pred             EEEEecCCcEEEEEEEEc--CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCEEEEEEec
Q psy18060        124 ICLIGEGSFGKVFKAIHL--DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNEFVLITEF  199 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~iV~E~  199 (549)
                      .+.||+|+||.||+|.++  .+++.+|+|.+......    ..+.+|+++++.++||||+++++++..  ...++++|||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            468999999999999965  46788999998654322    346789999999999999999998843  4578999999


Q ss_pred             CCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEE----ecCCcEEEeeccccee
Q psy18060        200 AHMSLSNLLEQR---------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL----NKDGVAMLCDFGFARS  266 (549)
Q Consensus       200 ~~gsL~~~l~~~---------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl----~~~g~vKL~DFGla~~  266 (549)
                      ++++|..++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+|+.
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          82 AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             cCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            999999888642         258999999999999999999999999999999999999    4557899999999986


Q ss_pred             cccCc---ccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHhcC-
Q psy18060        267 MAVGT---HMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSI---------LHLIRLLKTQ-  332 (549)
Q Consensus       267 ~~~~~---~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~---------~~~~~~i~~~-  332 (549)
                      .....   .......||+.|+|||++.+ ..++.++||||+||++|+|++|++||.....         ......+... 
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM  241 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence            64321   12244678999999999876 4589999999999999999999999964321         0111111000 


Q ss_pred             ---------------------------CCC----------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        333 ---------------------------DVT----------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       333 ---------------------------~~~----------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                                 ...          .....+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                       000          001235678899999999999999999999999997


No 121
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00  E-value=6e-43  Score=352.66  Aligned_cols=253  Identities=32%  Similarity=0.566  Sum_probs=213.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|++|.||+|.+..+++.||+|++............+.+|+.+++.++||||+++++.+......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46899999999999999999999999999999987544333334567889999999999999999999999999999999


Q ss_pred             cCCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~gs-L~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |++++ |..++.....+++..++.++.||+.||.|||+.|++||||||+||+++.+|.++|+|||++.............
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDY  160 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCc
Confidence            99965 55555566679999999999999999999999999999999999999999999999999998765443333445


Q ss_pred             CCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------CCCCC
Q psy18060        278 KGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------DVTFP  337 (549)
Q Consensus       278 ~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~~~~p  337 (549)
                      .++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+...                   ....|
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07847         161 VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIP  240 (286)
T ss_pred             ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCC
Confidence            68899999999866 55889999999999999999999999887654443332110                   00001


Q ss_pred             ------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        338 ------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       338 ------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                  +.++..+.+||.+||+.+|.+|||+.|++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         241 EPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                        2468889999999999999999999999999997


No 122
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=100.00  E-value=4.9e-43  Score=355.43  Aligned_cols=256  Identities=27%  Similarity=0.419  Sum_probs=216.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|+..+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++||+|+.+++.+...+.+++|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            377889999999999999999999999999998754322 2233456789999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |+. ++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++....... ...
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~  159 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ-TIK  159 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-ccc
Confidence            987 5899888654  358999999999999999999999999999999999999999999999999987654332 223


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHH-HHhcCCCCCCccCCHHHHHHHHHh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---HLIR-LLKTQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~---~~~~-~i~~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ...||+.|+|||++.+..++.++||||+||++|+|++|+.||......   .... ........++..+++++.+|+.+|
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05630         160 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKML  239 (285)
T ss_pred             CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHH
Confidence            457999999999999989999999999999999999999999865321   1121 122223345677899999999999


Q ss_pred             chhCcCCCCC-----HHHHhcCcccCcccc
Q psy18060        352 LEKDASQRLS-----WPELLHHPLVKDNLS  376 (549)
Q Consensus       352 L~~dP~~Rps-----~~elL~Hpw~~~~~~  376 (549)
                      |+.||.+|||     ++|+++||||+....
T Consensus       240 l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         240 LCKDPKERLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             hhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence            9999999999     899999999976433


No 123
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00  E-value=4.3e-43  Score=354.21  Aligned_cols=252  Identities=27%  Similarity=0.414  Sum_probs=210.3

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||+|+||.||++..+.+|+.||+|.+...... .........|+++++.++||||+++++++.....+++||||+. ++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999999999999999998653321 1223445679999999999999999999999999999999997 589


Q ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCc
Q psy18060        205 SNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL  282 (549)
Q Consensus       205 ~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~  282 (549)
                      .+++...  ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++....... ......||+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRAGTNG  159 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccCCCCC
Confidence            8887654  358899999999999999999999999999999999999999999999999997665432 2344579999


Q ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCCC-ccCCHHHHHHHHHhchhCcC
Q psy18060        283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFP-SQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       283 Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~----~~~~~~~i~~~~~~~p-~~~s~~~~dlI~~~L~~dP~  357 (549)
                      |+|||++.+..++.++|||||||++|+|++|+.||....    .......+......++ ..++++++++|.+||++||.
T Consensus       160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHh
Confidence            999999988889999999999999999999999997643    2333344443333333 46899999999999999999


Q ss_pred             CCCCH----HHHhcCcccCcccchhh
Q psy18060        358 QRLSW----PELLHHPLVKDNLSSEI  379 (549)
Q Consensus       358 ~Rps~----~elL~Hpw~~~~~~~~~  379 (549)
                      +||++    ++++.||||+....+..
T Consensus       240 ~R~~~~~~~~~~~~h~~f~~~~~~~~  265 (277)
T cd05607         240 DRLGSREKNDDPRKHEFFKTINFPRL  265 (277)
T ss_pred             hCCCCccchhhhhcChhhcCCCHHHH
Confidence            99999    67889999987544443


No 124
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00  E-value=1e-42  Score=352.96  Aligned_cols=259  Identities=26%  Similarity=0.400  Sum_probs=221.1

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|+..+.||+|+||+||++.+..+++.+|+|.+...... ......+.+|+++++.++||||+.+.+.+...+..+++||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            377889999999999999999999999999998654322 2233456789999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        199 FAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |+. ++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++....... ...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~  159 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-SIR  159 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-ccc
Confidence            998 5888887653  469999999999999999999999999999999999999999999999999987654332 224


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHhcCCCCCCccCCHHHHHHHHHh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLI----RLLKTQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~----~~i~~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ...||+.|+|||++.+..++.++|+|||||++|+|++|..||.........    ..+......++..+++++.+|+.+|
T Consensus       160 ~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (285)
T cd05632         160 GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKML  239 (285)
T ss_pred             CCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHH
Confidence            457999999999999889999999999999999999999999877654332    3333444456678899999999999


Q ss_pred             chhCcCCCCC-----HHHHhcCcccCcccchhh
Q psy18060        352 LEKDASQRLS-----WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       352 L~~dP~~Rps-----~~elL~Hpw~~~~~~~~~  379 (549)
                      |+.||.+|||     +.+++.||||+.......
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~  272 (285)
T cd05632         240 LTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRL  272 (285)
T ss_pred             ccCCHhHcCCCcccChHHHHcChhhhcCCHHHH
Confidence            9999999999     889999999988755443


No 125
>KOG0197|consensus
Probab=100.00  E-value=7.9e-44  Score=371.12  Aligned_cols=244  Identities=25%  Similarity=0.412  Sum_probs=215.0

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .+.+++++.||+|.||.||.|.... ...||+|.+.....+.   ..+.+|+++|++|+|+|||++++++...+.+||||
T Consensus       205 r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  205 REELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSP---EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             HHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccCh---hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence            3456788899999999999999874 4579999997654333   46779999999999999999999999988999999


Q ss_pred             ecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQ--RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||+. |+|.++|+.  +..+...+...++.|||+|++||+++++|||||...|||+++++.+||+|||+|+....+....
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~  360 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA  360 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence            9998 899999997  5678999999999999999999999999999999999999999999999999999554433222


Q ss_pred             c-ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        275 T-SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       275 ~-~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                      . ...-...|+|||.+..+.++.|||||||||+||||+| |+.||.+.+..+.++.+..+ +++.|+.+|+++.+++..|
T Consensus       361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C  440 (468)
T KOG0197|consen  361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSC  440 (468)
T ss_pred             cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence            1 1223456999999999999999999999999999998 99999999999999999876 4667889999999999999


Q ss_pred             chhCcCCCCCHHHH
Q psy18060        352 LEKDASQRLSWPEL  365 (549)
Q Consensus       352 L~~dP~~Rps~~el  365 (549)
                      |..+|++|||++.+
T Consensus       441 W~~~P~~RPtF~~L  454 (468)
T KOG0197|consen  441 WHEDPEDRPTFETL  454 (468)
T ss_pred             hhCCcccCCCHHHH
Confidence            99999999999755


No 126
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=3.6e-43  Score=351.39  Aligned_cols=251  Identities=29%  Similarity=0.516  Sum_probs=215.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||+|.+..+++.||+|.+....  ......+.+|+.+++.++||||+++++.+...+..+++|
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            357899999999999999999999999999999986542  233456788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++ ++|.+++...+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++............
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence            9998 589999998889999999999999999999999999999999999999999999999999998766543333345


Q ss_pred             cCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----ccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP-----SQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p-----~~~s~~~~dlI  348 (549)
                      ..||+.|+|||++.   ...++.++|+|||||++|+|++|..||...................+     ..++..+.++|
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            57999999999974   45688999999999999999999999976654443333322222211     24788999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPL  370 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw  370 (549)
                      .+||+.+|++|||+.++++|||
T Consensus       246 ~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHccCCchhCcCHHHHhcCCC
Confidence            9999999999999999999998


No 127
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00  E-value=7.1e-43  Score=357.73  Aligned_cols=258  Identities=29%  Similarity=0.459  Sum_probs=217.5

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFV  194 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~  194 (549)
                      .+++|++.+.||+|+||.||+|.+..+|+.||+|.+............+.+|+.++++++||||+++++++...  +.++
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            56789999999999999999999999999999999875433222233456799999999999999999998654  5689


Q ss_pred             EEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||++++|.+++.. ...+++.++..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus        85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~  164 (309)
T cd07845          85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP  164 (309)
T ss_pred             EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence            9999999999999876 367899999999999999999999999999999999999999999999999999876544333


Q ss_pred             ccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------C
Q psy18060        274 LTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------D  333 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~  333 (549)
                      .+...+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+...                   .
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (309)
T cd07845         165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK  244 (309)
T ss_pred             CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence            344456888999999865 56899999999999999999999999988877666554331                   0


Q ss_pred             CCCC-----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        334 VTFP-----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       334 ~~~p-----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ...+           ...++++.+||.+||+.||.+|||+.+++.||||++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         245 FTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             ccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence            0111           1258889999999999999999999999999999753


No 128
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00  E-value=1.6e-42  Score=346.35  Aligned_cols=252  Identities=29%  Similarity=0.557  Sum_probs=219.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-------HHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-------KELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-------~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      +|.+...||+|++|.||+|.+..+++.+|+|.+.......       .....+.+|+.+++.++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            4778899999999999999999889999999986543321       223568899999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      .+++|||++ ++|.+++...+.+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||+++......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            999999997 4899999988889999999999999999999999999999999999999999999999999987664221


Q ss_pred             c------cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHH
Q psy18060        272 H------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETY  344 (549)
Q Consensus       272 ~------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~  344 (549)
                      .      ......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+... ...+|..++..+
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEA  240 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHH
Confidence            1      112345889999999999888999999999999999999999999887665555444333 345677889999


Q ss_pred             HHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        345 KDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       345 ~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      .++|.+||+.||.+||++.++++||||
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         241 IDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            999999999999999999999999997


No 129
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=100.00  E-value=6.8e-43  Score=352.56  Aligned_cols=252  Identities=33%  Similarity=0.499  Sum_probs=213.1

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|+.++.||.|++|.||+|.+..+++.||+|.+............+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            48899999999999999999999999999999875443333445788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        200 AHMSLSNLLEQ--RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       200 ~~gsL~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      ++++|.+++..  ...+++..++.++.|++.||+|||+.|++||||+|+||+++.++.+||+|||+++............
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE  160 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccc
Confidence            99899998865  3568999999999999999999999999999999999999999999999999987665443333445


Q ss_pred             CCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-C-----------------C----
Q psy18060        278 KGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-D-----------------V----  334 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~-----------------~----  334 (549)
                      .+++.|+|||++.+. .++.++|||||||++|+|+||+.||.+.+.......+... .                 .    
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd07860         161 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPK  240 (284)
T ss_pred             cccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccc
Confidence            678999999988664 4688999999999999999999999877654333222110 0                 0    


Q ss_pred             -------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 -------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 -------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                             ...+.++++++++|.+||+.||.+|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         241 WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                   0123468899999999999999999999999999998


No 130
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=9.4e-43  Score=348.35  Aligned_cols=251  Identities=29%  Similarity=0.456  Sum_probs=214.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|++.+.||+|+||.||+|.+..+++.+|+|++.....  .....+.+|+.+++.++||||+++++++...+..++||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            4579999999999999999999999999999999865422  23456789999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++ ++|.+++..+..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++............
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06646          86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS  165 (267)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCc
Confidence            9998 589999988888999999999999999999999999999999999999999999999999999876533322344


Q ss_pred             cCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-----FPSQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~s~~~~dlI  348 (549)
                      ..|++.|+|||.+.   ...++.++|+||+||++|+|++|+.||...........+......     .+..++..+.+||
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV  245 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHH
Confidence            56899999999984   355788999999999999999999999766544433333222222     1235789999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPL  370 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw  370 (549)
                      .+||+.+|.+|||++++++|+|
T Consensus       246 ~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         246 KISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHhhCChhhCcCHHHHhcCCC
Confidence            9999999999999999999998


No 131
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00  E-value=7.4e-43  Score=351.84  Aligned_cols=254  Identities=33%  Similarity=0.553  Sum_probs=221.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||.|+||.||+|.+..++..+|+|.+...  .......+.+|+.+++.++||||+++++.+......++|||
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            5699999999999999999999989999999998653  33445678899999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAHM-SLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~g-sL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |+++ +|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++............
T Consensus        83 ~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~  162 (280)
T cd06611          83 FCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT  162 (280)
T ss_pred             ccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccce
Confidence            9985 899988764 56999999999999999999999999999999999999999999999999998665433333345


Q ss_pred             cCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---TFPSQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~dlI  348 (549)
                      ..||+.|+|||++.     +..++.++|+|||||++|+|++|++||...+.......+.....   ..|..++.++.++|
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (280)
T cd06611         163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFL  242 (280)
T ss_pred             eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHH
Confidence            57899999999974     34578899999999999999999999998877776666655432   34567899999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+||+.+|.+|||+.++++||||.+.
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         243 KSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHhccChhhCcCHHHHhcChhhccc
Confidence            99999999999999999999999765


No 132
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00  E-value=2e-42  Score=343.53  Aligned_cols=252  Identities=29%  Similarity=0.520  Sum_probs=223.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||++.+..+++.||+|.+............+.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            58899999999999999999999999999999976554555566889999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      +. ++|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++............
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            97 58999987643  5799999999999999999999999999999999999999999999999999766543333334


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchhC
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~d  355 (549)
                      ..|++.|+|||++.+..++.++|+|||||++++|++|+.||...+.......+..+. ...|..++.++.++|.+||..+
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRN  240 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCC
Confidence            568999999999998889999999999999999999999999888777766655443 3456778999999999999999


Q ss_pred             cCCCCCHHHHhcCccc
Q psy18060        356 ASQRLSWPELLHHPLV  371 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~  371 (549)
                      |.+||++.++++||||
T Consensus       241 p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         241 PRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999997


No 133
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00  E-value=2.4e-42  Score=354.69  Aligned_cols=261  Identities=33%  Similarity=0.505  Sum_probs=226.9

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-HHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+.+..... .....+.+|+++++.+.||||+++++.+...+..+++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            36899999999999999999999999999999997654332 34567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--  272 (549)
                      ||+. ++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||+++.+|.++|+|||++........  
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            9987 5899998764  5689999999999999999999999999999999999999999999999999865432110  


Q ss_pred             ---------------------------cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Q psy18060        273 ---------------------------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL  325 (549)
Q Consensus       273 ---------------------------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~  325 (549)
                                                 ......||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  240 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET  240 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence                                       11234689999999999988899999999999999999999999998887777


Q ss_pred             HHHHhcCCCCCCcc--CCHHHHHHHHHhchhCcCCCCC----HHHHhcCcccCcccchhh
Q psy18060        326 IRLLKTQDVTFPSQ--VSETYKDLVKGLLEKDASQRLS----WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       326 ~~~i~~~~~~~p~~--~s~~~~dlI~~~L~~dP~~Rps----~~elL~Hpw~~~~~~~~~  379 (549)
                      ...+......+|..  +++.+.++|.+||..||.+|||    ++|+++||||+....+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~  300 (316)
T cd05574         241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALI  300 (316)
T ss_pred             HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhc
Confidence            77766666555544  6999999999999999999999    999999999987655444


No 134
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.4e-43  Score=368.58  Aligned_cols=247  Identities=26%  Similarity=0.383  Sum_probs=203.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|++++.||+|+||.||+|.+..++..||+|+....        ....|+.++++++||||+++++++...+..++||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  136 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL  136 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence            35699999999999999999999999999999985432        2246899999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |++.++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .....
T Consensus       137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~  215 (357)
T PHA03209        137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PAFLG  215 (357)
T ss_pred             EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-ccccc
Confidence            9999999998865 456999999999999999999999999999999999999999999999999998754322 22345


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCC-CCCCH----------HHHHHHHh---cCCCCCC-----
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPF-KTVSI----------LHLIRLLK---TQDVTFP-----  337 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf-~~~~~----------~~~~~~i~---~~~~~~p-----  337 (549)
                      ..||+.|+|||++.+..++.++|||||||++|||+++..|+ .....          ......+.   ..+..+|     
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  295 (357)
T PHA03209        216 LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGS  295 (357)
T ss_pred             ccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCcc
Confidence            67999999999999999999999999999999999855444 32110          11111111   0111111     


Q ss_pred             -------------------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        338 -------------------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       338 -------------------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                                               ..++..+.+||.+||+.||.+|||+.|+|+||||++
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        296 RLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                     135667788999999999999999999999999975


No 135
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00  E-value=2.8e-42  Score=342.50  Aligned_cols=252  Identities=34%  Similarity=0.590  Sum_probs=223.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe--eCCEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE--TLNEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~iV~  197 (549)
                      +|++.+.||.|+||.||++.+..+++.+|+|.+............+.+|+++++.++||||+++++.+.  .....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            488999999999999999999999999999999776666666778889999999999999999998774  345689999


Q ss_pred             ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----hCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        198 EFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLH-----SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       198 E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH-----~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                      ||++ ++|.+++..    ...+++..++.++.||+.||.|||     +.+++||||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            9997 589999876    357899999999999999999999     899999999999999999999999999999876


Q ss_pred             ccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHH
Q psy18060        268 AVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKD  346 (549)
Q Consensus       268 ~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~d  346 (549)
                      ...........|++.|+|||++.+..++.++|+||||+++++|++|+.||...+.......+..+.. .+|..++..+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNE  240 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHH
Confidence            5544334456799999999999988899999999999999999999999998887777776665543 466788999999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        347 LVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ++.+||+.+|.+|||+.+|++|||+
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999996


No 136
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00  E-value=1.7e-42  Score=348.19  Aligned_cols=256  Identities=33%  Similarity=0.554  Sum_probs=223.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||+++++.+.....+++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            36888999999999999999999999999999987543 23445678899999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+. ++|.+++... .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||+++............
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTF  158 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccc
Confidence            987 5899998865 89999999999999999999999999999999999999999999999999998776543334556


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCcc-CCHHHHHHHHHhchhC
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQ-VSETYKDLVKGLLEKD  355 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~-~s~~~~dlI~~~L~~d  355 (549)
                      .|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+.... ...+.. +++.+.+++.+||..+
T Consensus       159 ~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  238 (274)
T cd06609         159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKD  238 (274)
T ss_pred             cCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCC
Confidence            78999999999998889999999999999999999999998877666555554442 233334 7899999999999999


Q ss_pred             cCCCCCHHHHhcCcccCcccc
Q psy18060        356 ASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~~~~~~  376 (549)
                      |.+|||++++++||||.....
T Consensus       239 p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         239 PKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             hhhCcCHHHHhhChhhcCCCc
Confidence            999999999999999976543


No 137
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00  E-value=2.6e-42  Score=343.23  Aligned_cols=250  Identities=30%  Similarity=0.516  Sum_probs=218.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.+.....  .....+.+|+.+++.++||||+++++.+...+.++++||
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            579999999999999999999999999999999975432  245788999999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAHM-SLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~g-sL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |+++ +|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++............
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS  160 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence            9985 899988776 78999999999999999999999999999999999999999999999999998766543333345


Q ss_pred             cCCCCcccccccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCccCCHHHHHHH
Q psy18060        277 IKGTPLYMAPELIAER---PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-----FPSQVSETYKDLV  348 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~---~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~s~~~~dlI  348 (549)
                      ..|+..|+|||.+.+.   .++.++|+|||||++|+|++|++||...+.......+......     .+..++.++.+|+
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFI  240 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHH
Confidence            6789999999999776   7899999999999999999999999887766555544443221     2345678999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPL  370 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw  370 (549)
                      .+||..+|.+|||+.+++.|||
T Consensus       241 ~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         241 KKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHcCCChhhCCCHHHHhcCCC
Confidence            9999999999999999999998


No 138
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00  E-value=3.1e-42  Score=349.96  Aligned_cols=259  Identities=32%  Similarity=0.516  Sum_probs=220.9

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ...+.|++++.||.|+||.||+|.+..+++.+|+|.+...  +......+.+|+.+++.++||||+++++.+...+.+++
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence            3447799999999999999999999999999999998653  34456778899999999999999999999999999999


Q ss_pred             EEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        196 ITEFAHM-SLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       196 V~E~~~g-sL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      ||||+++ +|..++.+ ...+++..+..++.|++.||.|||+.|++||||||+||+++.+|.++|+|||++.........
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            9999985 67777654 457899999999999999999999999999999999999999999999999998765433333


Q ss_pred             ccccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCccCCHHHH
Q psy18060        274 LTSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---TFPSQVSETYK  345 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~  345 (549)
                      .....|++.|+|||++.     ...++.++|||||||++|+|++|.+||...+.......+.....   ..|..++.++.
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFR  246 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHH
Confidence            34556899999999984     34578899999999999999999999988776665555543322   23557889999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ++|.+||..+|.+||+++++++||||.....
T Consensus       247 ~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  277 (292)
T cd06644         247 DFLKTALDKHPETRPSAAQLLEHPFVSSVTS  277 (292)
T ss_pred             HHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence            9999999999999999999999999975433


No 139
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00  E-value=5.9e-42  Score=340.14  Aligned_cols=252  Identities=30%  Similarity=0.495  Sum_probs=225.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|+.++.||.|+||.||.+....+++.+++|.+.....+......+.+|+.++++++||||+++++++.+.+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            58999999999999999999999999999999876655556667788999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ++ ++|.+++.+.  ..+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||+++...........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            97 5899999875  46899999999999999999999999999999999999999999999999999876544333455


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCccCCHHHHHHHHHhchhC
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-FPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~dlI~~~L~~d  355 (549)
                      ..|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+..+... .+..++.++.++|.+||..+
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQD  240 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccC
Confidence            67999999999998888999999999999999999999999988887777776655432 34567999999999999999


Q ss_pred             cCCCCCHHHHhcCccc
Q psy18060        356 ASQRLSWPELLHHPLV  371 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~  371 (549)
                      |.+|||+.++++|||+
T Consensus       241 p~~R~s~~~ll~~~~l  256 (256)
T cd08221         241 PEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCCCHHHHhhCcCC
Confidence            9999999999999996


No 140
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00  E-value=1.2e-42  Score=359.37  Aligned_cols=252  Identities=25%  Similarity=0.372  Sum_probs=207.0

Q ss_pred             EEEEEecC--CcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        123 KICLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       123 ~~~~iG~G--~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      ++++||+|  +||+||++.++.+|+.||+|.+............+.+|+.+++.++||||+++++++...+..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            46789999  7899999999999999999999765444555667888999999999999999999999999999999999


Q ss_pred             C-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-----
Q psy18060        201 H-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-----  272 (549)
Q Consensus       201 ~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-----  272 (549)
                      . |+|.+++..+  ..+++..++.++.|++.||+|||++||+||||||+|||++.++.++++|||.+........     
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            8 6899998753  4589999999999999999999999999999999999999999999999986543321100     


Q ss_pred             --cccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------
Q psy18060        273 --MLTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV--------------  334 (549)
Q Consensus       273 --~~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~--------------  334 (549)
                        ......++..|+|||++.+  ..++.++|||||||++|+|++|+.||..............+..              
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL  241 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence              1122356788999999975  4689999999999999999999999986554333222211110              


Q ss_pred             --------------------------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        335 --------------------------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       335 --------------------------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                                      +....+++.+.+||.+||+.||.+|||++|+++||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                            0112357789999999999999999999999999999753


No 141
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00  E-value=2.3e-42  Score=348.94  Aligned_cols=252  Identities=33%  Similarity=0.560  Sum_probs=216.7

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |++.+.||+|+||.||+|.+..++..+|+|.+...  .......+.+|+++++.++||||+++++.+...+..++||||+
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            68889999999999999999999999999998643  2345567889999999999999999999999999999999999


Q ss_pred             CC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        201 HM-SLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       201 ~g-sL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      ++ +|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++..............
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  164 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  164 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence            84 78777754 46799999999999999999999999999999999999999999999999999876543333334457


Q ss_pred             CCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHH
Q psy18060        279 GTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---VTFPSQVSETYKDLVKG  350 (549)
Q Consensus       279 GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dlI~~  350 (549)
                      ||+.|+|||++.     +..++.++|||||||++|+|++|++||...+.......+....   ...|..++.++.+||.+
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  244 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKK  244 (282)
T ss_pred             ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHH
Confidence            899999999983     4557889999999999999999999998877666555544332   23456789999999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccCcc
Q psy18060        351 LLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ||..||.+||++.++++||||+..
T Consensus       245 ~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         245 CLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HccCChhhCcCHHHHhcCCCEecc
Confidence            999999999999999999999754


No 142
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=4.4e-42  Score=350.53  Aligned_cols=254  Identities=33%  Similarity=0.572  Sum_probs=221.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|++.+.||.|++|.||+|.+..+++.+|+|.+.....  .....+.+|+.+++.++||||+++++++...+.+++|+
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence            3669999999999999999999999999999999865432  23456789999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+. ++|..++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||++............
T Consensus        96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  174 (296)
T cd06655          96 EYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST  174 (296)
T ss_pred             EecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence            9997 588888865 46899999999999999999999999999999999999999999999999998766544333345


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHHHHHHHhch
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+...   ....|..+++.+.++|.+||.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (296)
T cd06655         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLE  254 (296)
T ss_pred             cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhh
Confidence            57899999999999888999999999999999999999999988776555444332   223456789999999999999


Q ss_pred             hCcCCCCCHHHHhcCcccCcc
Q psy18060        354 KDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .||.+|||+.++++||||...
T Consensus       255 ~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         255 MDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             cChhhCCCHHHHhhChHhhhc
Confidence            999999999999999999753


No 143
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00  E-value=1.1e-42  Score=361.13  Aligned_cols=249  Identities=26%  Similarity=0.460  Sum_probs=204.6

Q ss_pred             ccceeEEEEEecCCcEEEEEEEE-----cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeC-
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIH-----LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETL-  190 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~-----~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~-  190 (549)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|++... ........+.+|+.++..+ +||||+++++++... 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            35799999999999999999975     234568999998643 2334456788999999999 899999999987654 


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc----------------------------------------------------------
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR----------------------------------------------------------  211 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~----------------------------------------------------------  211 (549)
                      ..++++|||++ |+|.+++...                                                          
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            46899999998 6899998753                                                          


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cccccCCCCcccc
Q psy18060        212 ----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMA  285 (549)
Q Consensus       212 ----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~A  285 (549)
                          ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......  ......+|+.|+|
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence                2377888899999999999999999999999999999999999999999999976533211  1123346788999


Q ss_pred             cccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        286 PELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILH-LIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       286 PE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~-~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                      ||++.+..++.++|||||||++|||++ |..||.+..... ....+..+ ....|..+++.+.+++.+||+.||.+|||+
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~  324 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTF  324 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            999999899999999999999999997 999998765432 33333333 334567889999999999999999999999


Q ss_pred             HHHhc
Q psy18060        363 PELLH  367 (549)
Q Consensus       363 ~elL~  367 (549)
                      .|+++
T Consensus       325 ~el~~  329 (338)
T cd05102         325 SALVE  329 (338)
T ss_pred             HHHHH
Confidence            99875


No 144
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00  E-value=8.5e-43  Score=346.92  Aligned_cols=251  Identities=33%  Similarity=0.525  Sum_probs=223.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +|++.+.||.|+||.||+|.+..+++.||+|.+.+... .......+.+|++++++++||||+++++.+...+..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            48899999999999999999999999999999976543 22456788999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+. ++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~  159 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTST  159 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-ccccc
Confidence            997 5899999888889999999999999999999999999999999999999999999999999987665432 23445


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCCCCCccCCHHHHHHHHHhchh
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS---ILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~---~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      .|+..|+|||++.+..++.++|+||||+++|+|++|..||...+   ...............|..+++.+.++|.+||+.
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  239 (258)
T cd05578         160 SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLER  239 (258)
T ss_pred             CCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccC
Confidence            68999999999988889999999999999999999999998776   445444444456677888999999999999999


Q ss_pred             CcCCCCCH--HHHhcCccc
Q psy18060        355 DASQRLSW--PELLHHPLV  371 (549)
Q Consensus       355 dP~~Rps~--~elL~Hpw~  371 (549)
                      ||.+||++  .|+++||||
T Consensus       240 ~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         240 DPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ChhHcCCccHHHHhcCCCC
Confidence            99999999  999999997


No 145
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00  E-value=4.2e-42  Score=352.47  Aligned_cols=253  Identities=27%  Similarity=0.468  Sum_probs=216.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+... ........+.+|+++++.++||||+++++.+...+.++++||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            3689999999999999999999999999999998653 233445668899999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |++ ++|.+++.+.+.+++..+..++.|++.||.|||+ .|++||||||+|||++.++.+||+|||++......  ....
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~  157 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--MANS  157 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc--cccc
Confidence            997 5899999988889999999999999999999998 59999999999999999999999999998765332  2345


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------------
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------------  332 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------------  332 (549)
                      ..|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+...                        
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPM  237 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchh
Confidence            57899999999998888999999999999999999999999765543333222111                        


Q ss_pred             -------------CCCCC-ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        333 -------------DVTFP-SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       333 -------------~~~~p-~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                   .+..| ..++.++.+||.+||..+|.+|||+.++++||||.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         238 AIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                         11111 1367889999999999999999999999999999753


No 146
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00  E-value=3e-42  Score=349.72  Aligned_cols=254  Identities=27%  Similarity=0.424  Sum_probs=211.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCE-----
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNE-----  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~-----  192 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.+. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3689999999999999999999999999999998654333333456788999999994 6999999999876655     


Q ss_pred             EEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeeccccee
Q psy18060        193 FVLITEFAHMSLSNLLEQR-----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARS  266 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~  266 (549)
                      .|++|||++++|.+++...     ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||+++.
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence            8999999999999988653     35799999999999999999999999999999999999998 88999999999976


Q ss_pred             cccCcccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------
Q psy18060        267 MAVGTHMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD------------  333 (549)
Q Consensus       267 ~~~~~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~------------  333 (549)
                      ........+...+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+....            
T Consensus       161 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T cd07837         161 FSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVS  240 (295)
T ss_pred             cCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchh
Confidence            5443333344467899999998865 457999999999999999999999998876655443332100            


Q ss_pred             --------CC--------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        334 --------VT--------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       334 --------~~--------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                              ..        ..+.+++++.+||.+||.+||.+|||+.|++.||||+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         241 KLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             hccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                    00        0134789999999999999999999999999999984


No 147
>PHA02988 hypothetical protein; Provisional
Probab=100.00  E-value=2.3e-42  Score=350.59  Aligned_cols=238  Identities=19%  Similarity=0.294  Sum_probs=207.7

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh-HHHHHHHHHHHHHHhcCCCCeeEEEEEEee----CCEEEEEEec
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG-KELSSLKQECEIQKHLAHPNIIKFIASHET----LNEFVLITEF  199 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~----~~~~~iV~E~  199 (549)
                      ..||+|++|.||+|..  +|+.||+|.+....... .....+.+|+.++++++||||+++++++.+    ...+++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            5799999999999987  58999999997654332 234678899999999999999999999866    4578999999


Q ss_pred             CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        200 AH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       200 ~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      +. |+|.+++.+.+.+++.....++.|++.||.|||+. +++||||||+|||++.+|.+||+|||+++.....   ....
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~---~~~~  180 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP---PFKN  180 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---cccc
Confidence            98 58999999888999999999999999999999984 9999999999999999999999999999765432   2345


Q ss_pred             CCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHhch
Q psy18060        278 KGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       278 ~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      .||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.+..+....+...  .+.+|...++++++++.+||+
T Consensus       181 ~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~  260 (283)
T PHA02988        181 VNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTS  260 (283)
T ss_pred             cCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhc
Confidence            68999999999976  68999999999999999999999999998888877776433  345566789999999999999


Q ss_pred             hCcCCCCCHHHHhc
Q psy18060        354 KDASQRLSWPELLH  367 (549)
Q Consensus       354 ~dP~~Rps~~elL~  367 (549)
                      .||.+|||+.|+++
T Consensus       261 ~dp~~Rps~~ell~  274 (283)
T PHA02988        261 HDSIKRPNIKEILY  274 (283)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999975


No 148
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=2.6e-42  Score=391.46  Aligned_cols=263  Identities=34%  Similarity=0.540  Sum_probs=220.2

Q ss_pred             cccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--C
Q psy18060        113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--L  190 (549)
Q Consensus       113 ~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~  190 (549)
                      .....+.+|.+++.||+|+||.||+|.+..++..+|+|++............+..|+.+++.+.|||||+++++|..  .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            34456688999999999999999999999999999999998765555666788999999999999999999998854  4


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-------CCccccccCCcEEEec------
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR----KKLSETICVQILSNLISALYYLHSN-------RVLHRDLKPQNVLLNK------  252 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~----~~l~e~~~~~i~~qIl~aL~yLH~~-------gIiHrDIKP~NILl~~------  252 (549)
                      ..+||||||+. ++|.++|...    ..+++..++.|+.||+.||.|||+.       +||||||||+||||+.      
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            57899999998 5999998753    5799999999999999999999984       4999999999999964      


Q ss_pred             -----------CCcEEEeecccceecccCcccccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCC
Q psy18060        253 -----------DGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKT  319 (549)
Q Consensus       253 -----------~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~  319 (549)
                                 .+.+||+|||+++...... ......||+.|+|||++.+  ..++.++||||||||||+|+||..||..
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~  245 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK  245 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence                       2358999999998664332 2345579999999999854  4589999999999999999999999976


Q ss_pred             CCH-HHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        320 VSI-LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       320 ~~~-~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      .+. ...+..+...+.......++++.+||..||..+|.+||++.|+|.|||++....
T Consensus       246 ~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        246 ANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             CCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence            554 344444444332223467899999999999999999999999999999986543


No 149
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00  E-value=3.9e-42  Score=346.52  Aligned_cols=256  Identities=30%  Similarity=0.509  Sum_probs=210.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHH-HHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+|+.||+|.+......... ..+..|+.+ ++.++||||+++++++...+.+|++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQ-KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHH-HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            3689999999999999999999999999999998765433333 344445554 67779999999999999999999999


Q ss_pred             ecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        198 EFAHMSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       198 E~~~gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ||++|+|.+++..    ...+++..+..++.||+.||+|||++ +++||||||+|||++.++.+||+|||+++..... .
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~-~  158 (283)
T cd06617          80 EVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS-V  158 (283)
T ss_pred             hhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc-c
Confidence            9999999888764    24689999999999999999999998 9999999999999999999999999998765432 1


Q ss_pred             cccccCCCCcccccccccC----CCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCCCCCC-ccCCHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAE----RPYDHTADLWSLGCIAYEIHMGHPPFKTVS--ILHLIRLLKTQDVTFP-SQVSETYK  345 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~--~~~~~~~i~~~~~~~p-~~~s~~~~  345 (549)
                      ..+...|+..|+|||++.+    ..++.++|+|||||++|+|++|+.||....  .......+......+| ..+|+++.
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  238 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQ  238 (283)
T ss_pred             ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHH
Confidence            2233568999999998864    457899999999999999999999997532  2233222322333343 35799999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ++|.+||..+|.+|||+.+++.||||.....
T Consensus       239 ~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         239 DFVNKCLKKNYKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence            9999999999999999999999999986543


No 150
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00  E-value=8.4e-42  Score=349.36  Aligned_cols=261  Identities=26%  Similarity=0.462  Sum_probs=224.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++.+...+.+++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            368999999999999999999999999999999876432 2234457789999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-----  271 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-----  271 (549)
                      ||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.+|.++|+|||+++......     
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            9997 5899999988889999999999999999999999999999999999999999999999999986321100     


Q ss_pred             ----------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---
Q psy18060        272 ----------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS---  338 (549)
Q Consensus       272 ----------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~---  338 (549)
                                .......|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+..+....+.......|.   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE  240 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccc
Confidence                      0112245788999999998888999999999999999999999999988888777776665444332   


Q ss_pred             cCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccchhh
Q psy18060        339 QVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       339 ~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~  379 (549)
                      .+++++.++|.+||+.+|.+||+   +.++++||||........
T Consensus       241 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~  284 (305)
T cd05609         241 ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGL  284 (305)
T ss_pred             cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHH
Confidence            57899999999999999999998   799999999976554443


No 151
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=5.9e-42  Score=349.40  Aligned_cols=255  Identities=29%  Similarity=0.536  Sum_probs=219.8

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ...+|++.+.||+|+||.||+|.+..+++.+|+|.+......  ....+.+|+.+++.+.||||+++++.+......++|
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence            346799999999999999999999999999999998764432  235678999999999999999999999999999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||+. ++|.+++.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...........
T Consensus        96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  174 (296)
T cd06654          96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (296)
T ss_pred             ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccC
Confidence            99997 589998864 4689999999999999999999999999999999999999999999999999876554433334


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHHHHHHHhc
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ...|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+...   ....|..+++.+.++|.+||
T Consensus       175 ~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  254 (296)
T cd06654         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (296)
T ss_pred             cccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHC
Confidence            457899999999998888999999999999999999999999877664443333222   22345678899999999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCcc
Q psy18060        353 EKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ..+|.+|||+.++++||||...
T Consensus       255 ~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         255 DMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             cCCcccCcCHHHHhhChhhhcc
Confidence            9999999999999999999743


No 152
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00  E-value=3.4e-42  Score=344.94  Aligned_cols=250  Identities=30%  Similarity=0.542  Sum_probs=211.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeC------C
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETL------N  191 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~------~  191 (549)
                      ..|++.+.||+|+||.||+|.+..+++.+|+|.+.....   ....+.+|+.+++.+ +||||+++++.+...      .
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            568888999999999999999999999999999875432   235678899999998 799999999988642      4


Q ss_pred             EEEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc
Q psy18060        192 EFVLITEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA  268 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~  268 (549)
                      .+|++|||++ ++|.+++...  ..+++..+..++.|++.||+|||++||+||||||+||++++++.++|+|||++....
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence            6899999998 5899998864  468999999999999999999999999999999999999999999999999997654


Q ss_pred             cCcccccccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCccCC
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV--TFPSQVS  341 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s  341 (549)
                      ..........|++.|+|||++.     +..++.++|||||||++|+|++|+.||...........+.....  ..+..++
T Consensus       163 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (272)
T cd06637         163 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWS  242 (272)
T ss_pred             cccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcC
Confidence            3333345567999999999985     34588899999999999999999999987666555544433321  2234678


Q ss_pred             HHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        342 ETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       342 ~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +.+.+|+.+||..+|.+|||+.+++.||||
T Consensus       243 ~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         243 KKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999999999997


No 153
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00  E-value=3.9e-42  Score=349.27  Aligned_cols=257  Identities=29%  Similarity=0.456  Sum_probs=215.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      +++|++.+.||+|++|.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++...+..++||
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            36799999999999999999999999999999998665433334456788999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeecccceecccCcccc
Q psy18060        198 EFAHMSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~gsL~~~l~~~~~--l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||++++|.+++.....  +++..++.++.||+.||+|||++|++||||+|+||+++. ++.+||+|||++..........
T Consensus        81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~  160 (294)
T PLN00009         81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF  160 (294)
T ss_pred             ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc
Confidence            9999999988876543  578889999999999999999999999999999999985 4579999999997654433333


Q ss_pred             cccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---C-----------------
Q psy18060        275 TSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---D-----------------  333 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~-----------------  333 (549)
                      +...|++.|+|||++.+ ..++.++|||||||++|+|+||++||...+..+....+...   +                 
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (294)
T PLN00009        161 THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSA  240 (294)
T ss_pred             ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhh
Confidence            44568899999999865 45789999999999999999999999877665544433210   0                 


Q ss_pred             -CC--------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        334 -VT--------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       334 -~~--------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                       ..        ..+.+++++.++|.+||+.+|.+||++.+++.||||.+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        241 FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence             00        123578899999999999999999999999999999764


No 154
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00  E-value=3.3e-42  Score=343.43  Aligned_cols=248  Identities=30%  Similarity=0.514  Sum_probs=219.9

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||.|++|.||+|.+..+++.+|+|++.+... .......+.+|+++++.++||||+++++.+.+.+.++++|||+. ++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6999999999999999999999999976543 23345678999999999999999999999999999999999987 699


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCccc
Q psy18060        205 SNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYM  284 (549)
Q Consensus       205 ~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~  284 (549)
                      .+++.+...+++..+..++.||+.||+|||++|++|+||+|+||+++.++.++|+|||+++...... ......|++.|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~  159 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYV  159 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCcc
Confidence            9999988889999999999999999999999999999999999999999999999999998765432 223457899999


Q ss_pred             ccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHh--cCCCCCCccCCHHHHHHHHHhchhCcCCCC
Q psy18060        285 APELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS--ILHLIRLLK--TQDVTFPSQVSETYKDLVKGLLEKDASQRL  360 (549)
Q Consensus       285 APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~--~~~~~~~i~--~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rp  360 (549)
                      |||.+.+..++.++|+||||+++|+|++|..||....  .......+.  .....+|...++++.++|.+||..+|.+||
T Consensus       160 ~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         160 APEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             ChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCc
Confidence            9999988889999999999999999999999998776  666666665  445567777899999999999999999999


Q ss_pred             C-----HHHHhcCcccCccc
Q psy18060        361 S-----WPELLHHPLVKDNL  375 (549)
Q Consensus       361 s-----~~elL~Hpw~~~~~  375 (549)
                      +     ++|+++||||++..
T Consensus       240 ~~~~~~~~~l~~~~~~~~~~  259 (262)
T cd05572         240 GNLKGGIKDIKKHKWFNGFD  259 (262)
T ss_pred             CCcccCHHHHhcChhhhCCC
Confidence            9     99999999998653


No 155
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=2.4e-42  Score=372.82  Aligned_cols=248  Identities=27%  Similarity=0.365  Sum_probs=207.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|....        ..+.+|++++++++|||||++++++...+..++||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~  239 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL  239 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            3469999999999999999999999999999996422        23468999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cc
Q psy18060        198 EFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--ML  274 (549)
Q Consensus       198 E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~  274 (549)
                      |++.++|..++..+ ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......  ..
T Consensus       240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence            99999999988764 4699999999999999999999999999999999999999999999999999976543211  22


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHhcCCC---CCC------
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV--------SILHLIRLLKTQDV---TFP------  337 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~--------~~~~~~~~i~~~~~---~~p------  337 (549)
                      ....||+.|+|||++.+..++.++|||||||++|||++|..|+...        ....+.+.+.....   .+|      
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  399 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR  399 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence            3457999999999999999999999999999999999987655322        12233333322111   011      


Q ss_pred             -------------------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        338 -------------------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       338 -------------------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                                               ..+++.+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                     024568899999999999999999999999999964


No 156
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00  E-value=1.9e-42  Score=351.42  Aligned_cols=255  Identities=30%  Similarity=0.482  Sum_probs=215.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFV  194 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~  194 (549)
                      .+++|++.+.||.|+||.||+|.+..+++.+|+|.+............+.+|+.++++++||||+++++++...  +..|
T Consensus         3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            34679999999999999999999999999999999976543333334567899999999999999999998777  8899


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      +||||++++|.+++.... .+++..++.++.||+.||+|||++|++||||||+|||++.+|.++|+|||++.........
T Consensus        83 lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  162 (293)
T cd07843          83 MVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP  162 (293)
T ss_pred             EEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc
Confidence            999999999999987654 5899999999999999999999999999999999999999999999999999876544333


Q ss_pred             ccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--------------------
Q psy18060        274 LTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--------------------  332 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--------------------  332 (549)
                      .....+++.|+|||.+.+. .++.++|+|||||++|+|++|.+||...+.......+...                    
T Consensus       163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T cd07843         163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK  242 (293)
T ss_pred             cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence            3445688999999998654 4689999999999999999999999887665554433210                    


Q ss_pred             -----------CCCCCcc-CCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        333 -----------DVTFPSQ-VSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       333 -----------~~~~p~~-~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                 ...+|.. +++.+.++|++||+.+|++|||+.|++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                       0112222 58899999999999999999999999999997


No 157
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00  E-value=4.9e-42  Score=346.05  Aligned_cols=253  Identities=34%  Similarity=0.537  Sum_probs=215.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||+|.+..+|+.+|+|++............+.+|+.+++.++||||+++++++......++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            58899999999999999999999999999999987654445556788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-ccccc
Q psy18060        200 AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-MLTSI  277 (549)
Q Consensus       200 ~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~~~~  277 (549)
                      ++++|.+++.. ...+++.+++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++........ .....
T Consensus        81 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  160 (286)
T cd07832          81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ  160 (286)
T ss_pred             cCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccc
Confidence            97799999865 45699999999999999999999999999999999999999999999999999876654321 23345


Q ss_pred             CCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------CCC--
Q psy18060        278 KGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------DVT--  335 (549)
Q Consensus       278 ~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~~~--  335 (549)
                      .|+..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+...                   ...  
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07832         161 VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFP  240 (286)
T ss_pred             cCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCC
Confidence            68999999999865 44689999999999999999999999877655544433211                   000  


Q ss_pred             ---------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        336 ---------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       336 ---------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                               ..+..+..+.++|.+||..+|.+|||++++++||||.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence                     1124578999999999999999999999999999983


No 158
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00  E-value=3.1e-42  Score=360.34  Aligned_cols=257  Identities=27%  Similarity=0.418  Sum_probs=215.1

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ...+|++.+.||+|+||.||+|.+..+++.+|+|.+.+..........+.+|+.+++.++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            35789999999999999999999999999999999875444444455677899999999999999999987543      


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ...|+||||+.++|.+.+...  +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  171 (353)
T cd07850          94 QDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  171 (353)
T ss_pred             CcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence            357999999999999988754  999999999999999999999999999999999999999999999999999876543


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------  332 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------  332 (549)
                      . ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...                  
T Consensus       172 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (353)
T cd07850         172 F-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRN  250 (353)
T ss_pred             C-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhH
Confidence            2 234456899999999999999999999999999999999999999877654433332110                  


Q ss_pred             ----CC--------------CC-------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        333 ----DV--------------TF-------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       333 ----~~--------------~~-------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                          ..              .+       +...++.+.++|.+||+.||.+|||+.|+|.||||+....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~  319 (353)
T cd07850         251 YVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD  319 (353)
T ss_pred             HhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence                00              00       1134667899999999999999999999999999975443


No 159
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00  E-value=4e-42  Score=350.68  Aligned_cols=256  Identities=31%  Similarity=0.523  Sum_probs=209.5

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC----
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN----  191 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----  191 (549)
                      ..+++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|++++++++||||+++++++....    
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence            3457899999999999999999999999999999998654333222345568999999999999999999876543    


Q ss_pred             ----EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        192 ----EFVLITEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       192 ----~~~iV~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                          ..++||||++++|.+.+.... .+++.+++.++.||+.||.|||++|++||||||+||+++.++.+||+|||++..
T Consensus        89 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865          89 RYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             CCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence                469999999999998887653 789999999999999999999999999999999999999999999999999976


Q ss_pred             cccCcc----cccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-------
Q psy18060        267 MAVGTH----MLTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-------  334 (549)
Q Consensus       267 ~~~~~~----~~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-------  334 (549)
                      ......    ......++..|+|||++.+. .++.++||||||+++|+|++|++||.+.+.......+.....       
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (310)
T cd07865         169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW  248 (310)
T ss_pred             ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            543221    12334678899999988654 478899999999999999999999988766544333222100       


Q ss_pred             ------------CCC-------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 ------------TFP-------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 ------------~~p-------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                  .+|             ...+..+.+||.+||..||.+|||++|+++||||
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                        011             1135678899999999999999999999999997


No 160
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=100.00  E-value=5e-42  Score=347.71  Aligned_cols=254  Identities=29%  Similarity=0.474  Sum_probs=210.0

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      .+++|++.+.||+|++|.||+|.++.+++.||+|.+....... ....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            4578999999999999999999999899999999987543221 223456899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||+++..........
T Consensus        82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  161 (291)
T cd07844          82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS  161 (291)
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence            999999999988764 4689999999999999999999999999999999999999999999999999875543322233


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcC-------------------CC
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQ-------------------DV  334 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~~~-------------------~~  334 (549)
                      ...+++.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.. ..+....+...                   ..
T Consensus       162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07844         162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY  241 (291)
T ss_pred             ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence            3457889999999865 558999999999999999999999997655 22222211100                   00


Q ss_pred             C-----------CCccCC--HHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 T-----------FPSQVS--ETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 ~-----------~p~~~s--~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      .           ..+.++  +.+.+++.+||+.+|.+|||+.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         242 SFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0           001234  888999999999999999999999999998


No 161
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00  E-value=1.7e-42  Score=349.72  Aligned_cols=253  Identities=31%  Similarity=0.518  Sum_probs=213.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+++++.++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46899999999999999999999999999999986644333334567889999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+.+ +|..+......+++.++..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++..........+..
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDY  160 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcc
Confidence            9996 566666666679999999999999999999999999999999999999999999999999998765444444556


Q ss_pred             CCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------CC--
Q psy18060        278 KGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-------------------VT--  335 (549)
Q Consensus       278 ~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-------------------~~--  335 (549)
                      .|+..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+....                   ..  
T Consensus       161 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T cd07846         161 VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLP  240 (286)
T ss_pred             cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccc
Confidence            78999999999865 457889999999999999999999998766443333222100                   00  


Q ss_pred             ----------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 ----------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 ----------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                .++.++..+.+|+.+||..+|.+||++.++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         241 EVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                      123578899999999999999999999999999997


No 162
>KOG0607|consensus
Probab=100.00  E-value=1.3e-43  Score=346.60  Aligned_cols=251  Identities=33%  Similarity=0.544  Sum_probs=221.8

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      .+.||+|+|+.|-.|....++..||||++.+.  .......+.+|++++.+. .|+||++++++|++.+.+|+|||-+. 
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G  160 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG  160 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence            36799999999999999999999999999875  455667889999999888 59999999999999999999999988 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC---cEEEeecccceeccc-------Cc
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG---VAMLCDFGFARSMAV-------GT  271 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g---~vKL~DFGla~~~~~-------~~  271 (549)
                      |+|..+|.++..|+|.++.+++++|+.||.+||.+||.||||||+|||.....   -||||||.+...+..       .+
T Consensus       161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast  240 (463)
T KOG0607|consen  161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST  240 (463)
T ss_pred             chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence            58999999999999999999999999999999999999999999999997654   489999998754322       12


Q ss_pred             ccccccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCC---------------CHHHHHHHHhc
Q psy18060        272 HMLTSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTV---------------SILHLIRLLKT  331 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~---------------~~~~~~~~i~~  331 (549)
                      ....+.+|+..|||||+..     ...|+.++|.||||||||-||+|.+||.+.               -...+++.|+.
T Consensus       241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE  320 (463)
T KOG0607|consen  241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE  320 (463)
T ss_pred             ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence            3345678999999999862     356999999999999999999999999763               15677788999


Q ss_pred             CCCCCCc----cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        332 QDVTFPS----QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       332 ~~~~~p~----~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      +.+.||+    .+|.+++++|..+|.+||.+|.++.++++|||+.....
T Consensus       321 GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  321 GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence            9999996    48999999999999999999999999999999986543


No 163
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=100.00  E-value=3.9e-42  Score=349.74  Aligned_cols=257  Identities=30%  Similarity=0.455  Sum_probs=217.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS---GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+......   ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            488899999999999999999999999999999765433   22345667899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||+.++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||+++..........
T Consensus        81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (298)
T cd07841          81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT  160 (298)
T ss_pred             EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc
Confidence            9999889999998766 799999999999999999999999999999999999999999999999999987655433334


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------------------
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---------------------  333 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---------------------  333 (549)
                      ...+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+.......+....                     
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (298)
T cd07841         161 HQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFK  240 (298)
T ss_pred             ccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccccc
Confidence            4567889999999854 567899999999999999999998888766554444332110                     


Q ss_pred             --CC-----CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        334 --VT-----FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       334 --~~-----~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                        ..     .....+..+.++|.+||+++|.+|||+.|++.||||.+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         241 PFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             ccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence              00     11345788999999999999999999999999999987543


No 164
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00  E-value=1e-41  Score=344.04  Aligned_cols=249  Identities=30%  Similarity=0.499  Sum_probs=210.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|++++++++||||+++++.+...+..++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            36888999999999999999999999999999987542 33445678899999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+++ +|..+    ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......  ..+..
T Consensus        80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~  153 (279)
T cd06619          80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTY  153 (279)
T ss_pred             cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccCC
Confidence            9985 56433    45789999999999999999999999999999999999999999999999999765432  23456


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHhcCC-CCC-CccCCHHHHHHH
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------ILHLIRLLKTQD-VTF-PSQVSETYKDLV  348 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-------~~~~~~~i~~~~-~~~-p~~~s~~~~dlI  348 (549)
                      .||+.|+|||++.+..++.++|+|||||++|+|++|+.||....       .......+.... ... ....++++.++|
T Consensus       154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  233 (279)
T cd06619         154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFI  233 (279)
T ss_pred             CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHH
Confidence            79999999999998889999999999999999999999996532       122222222222 222 235789999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+||+.+|.+||+++++++||||...
T Consensus       234 ~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         234 TQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHhhCChhhCCCHHHHhcCcccccc
Confidence            99999999999999999999999754


No 165
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=100.00  E-value=1.1e-41  Score=337.68  Aligned_cols=251  Identities=29%  Similarity=0.558  Sum_probs=221.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+.....+......+.+|+.+++.++||||+++++.+...+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            58999999999999999999999999999999987665556677899999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeecccceecccCccccc
Q psy18060        200 AH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       200 ~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~~~~~  275 (549)
                      ++ ++|.+++...  ..+++..+..++.|++.||+|||++|++||||||+||+++.++ .+||+|||++....... ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~  159 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-KAY  159 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-ccc
Confidence            97 5899999764  3589999999999999999999999999999999999998654 68999999998765432 223


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      ...|++.|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.... ..+|..+++.+.+++.+||..
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  239 (256)
T cd08220         160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNL  239 (256)
T ss_pred             ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccC
Confidence            4568999999999998889999999999999999999999999887766666655443 346677899999999999999


Q ss_pred             CcCCCCCHHHHhcCccc
Q psy18060        355 DASQRLSWPELLHHPLV  371 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~  371 (549)
                      +|.+|||+.|+++||||
T Consensus       240 ~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         240 DPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             ChhhCCCHHHHhhCCCC
Confidence            99999999999999996


No 166
>KOG4236|consensus
Probab=100.00  E-value=8.7e-44  Score=365.61  Aligned_cols=247  Identities=32%  Similarity=0.568  Sum_probs=224.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCCCCH
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSL  204 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~gsL  204 (549)
                      +.||+|.||+||-|.++++|+.||||++.+.....+..+.+++|+.||+++.||.||.+-..|++.+.+++|||-+.|+.
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            68999999999999999999999999999988877777899999999999999999999999999999999999999997


Q ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC---CcEEEeecccceecccCcccccccCC
Q psy18060        205 SNLLEQ--RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD---GVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       205 ~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~---g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      ...|-.  .+++++...++++.||+.||.|||-+||+|+||||+|||+.+.   ..+||||||+||.++.. ....+.+|
T Consensus       650 LEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVVG  728 (888)
T KOG4236|consen  650 LEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVVG  728 (888)
T ss_pred             HHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-hhhhhhcC
Confidence            777643  5789999999999999999999999999999999999999765   37999999999988754 45677899


Q ss_pred             CCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc----cCCHHHHHHHHHhchhC
Q psy18060        280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----QVSETYKDLVKGLLEKD  355 (549)
Q Consensus       280 T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~dlI~~~L~~d  355 (549)
                      ||.|.|||++.+..|+..-|+||+|||+|--++|..||....  ++-..|++..+.+|+    .+++++.|||+.+|+..
T Consensus       729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVk  806 (888)
T KOG4236|consen  729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVK  806 (888)
T ss_pred             CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999997653  334456666665554    58999999999999999


Q ss_pred             cCCCCCHHHHhcCcccCcc
Q psy18060        356 ASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~~~~  374 (549)
                      -.+|.|+...|.|||+++.
T Consensus       807 m~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  807 MRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHhcchHhhccchhhhcc
Confidence            9999999999999999876


No 167
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=100.00  E-value=3.8e-42  Score=340.91  Aligned_cols=249  Identities=35%  Similarity=0.605  Sum_probs=217.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+....    ....+.+|+.+++.++||||+++++.+......|+++|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            56899999999999999999999989999999986532    25688999999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAHM-SLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~g-sL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ++++ +|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++............
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT  158 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence            9984 89999875 457899999999999999999999999999999999999999999999999998776544323344


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHhch
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---VTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..|+..|+|||++.+..++.++|||||||++|+|++|+.||...........+....   ...+..+++.+.++|.+||+
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd06612         159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLV  238 (256)
T ss_pred             ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHh
Confidence            568999999999998899999999999999999999999998876655444433222   23345678899999999999


Q ss_pred             hCcCCCCCHHHHhcCccc
Q psy18060        354 KDASQRLSWPELLHHPLV  371 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~  371 (549)
                      .||.+|||+.|++.||||
T Consensus       239 ~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         239 KDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             cChhhCcCHHHHhcCCCC
Confidence            999999999999999997


No 168
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00  E-value=8.8e-42  Score=341.72  Aligned_cols=253  Identities=30%  Similarity=0.543  Sum_probs=215.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~  193 (549)
                      .+|+..+.||+|+||.||+|.+..++..||+|.+.....   .......+.+|+.+++.++||||+++++++..  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            368899999999999999999999999999999865432   22344678899999999999999999998865  4678


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-  271 (549)
                      +++|||++ ++|.+++.....+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+++...... 
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            99999997 5899999888889999999999999999999999999999999999999999999999999987653211 


Q ss_pred             --ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHH
Q psy18060        272 --HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDL  347 (549)
Q Consensus       272 --~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dl  347 (549)
                        .......|+..|+|||++.+..++.++||||+||++|+|++|+.||...........+...  ...+|..+++.++++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDF  241 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHH
Confidence              1122346889999999999888999999999999999999999999877655555444332  234566788999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      + +||..+|.+|||++|+++||||+
T Consensus       242 i-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         242 L-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             H-HHhcCChhhCcCHHHHhcCcccc
Confidence            9 67778999999999999999985


No 169
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=5.6e-42  Score=349.73  Aligned_cols=256  Identities=30%  Similarity=0.551  Sum_probs=220.2

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ....+|++.+.||+|+||.||+|.+..+++.||+|.+......  ....+.+|+.+++.++||||+++++.+...+..++
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence            3447899999999999999999999999999999998754332  23567889999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||||++ ++|.+++.+ ..+++.++..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++..........
T Consensus        94 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~  172 (297)
T cd06656          94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  172 (297)
T ss_pred             eecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc
Confidence            999997 589988864 568999999999999999999999999999999999999999999999999997765443334


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHHHHHHHh
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~dlI~~~  351 (549)
                      ....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+...   ....|..+++.+.+|+.+|
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  252 (297)
T cd06656         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRC  252 (297)
T ss_pred             CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHH
Confidence            4567899999999999888999999999999999999999999876654433222221   2234567889999999999


Q ss_pred             chhCcCCCCCHHHHhcCcccCcc
Q psy18060        352 LEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      |..+|.+||++.++++||||...
T Consensus       253 l~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         253 LEMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             ccCChhhCcCHHHHhcCchhccc
Confidence            99999999999999999999754


No 170
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=100.00  E-value=9.2e-42  Score=339.92  Aligned_cols=252  Identities=31%  Similarity=0.545  Sum_probs=217.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||.|+||.||+|....++..+|+|++....... ....+.+|+.+++.++||||+++++.+...+..+++||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            46899999999999999999998899999999987544333 56788999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-
Q psy18060        199 FAH-MSLSNLLEQR---KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-  273 (549)
Q Consensus       199 ~~~-gsL~~~l~~~---~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-  273 (549)
                      ++. ++|.+++...   ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++......... 
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~  159 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT  159 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence            997 5899998764   45899999999999999999999999999999999999999999999999998766543222 


Q ss_pred             ---ccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCC-----ccCCHH
Q psy18060        274 ---LTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFP-----SQVSET  343 (549)
Q Consensus       274 ---~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p-----~~~s~~  343 (549)
                         .....|+..|+|||++... .++.++|+|||||++|+|++|+.||...+.......+..... .++     ..+++.
T Consensus       160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06610         160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKS  239 (267)
T ss_pred             ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHH
Confidence               2344689999999998766 789999999999999999999999988766555544433321 122     257899


Q ss_pred             HHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        344 YKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       344 ~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +.+++.+||..||.+|||+.++++||||
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         240 FRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999999999997


No 171
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00  E-value=1.5e-41  Score=339.55  Aligned_cols=253  Identities=28%  Similarity=0.517  Sum_probs=215.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC---CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG---RSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~  193 (549)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+....   ........+.+|+.+++.+.||||+++++++.+  ...+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            57899999999999999999999999999999886432   123345678899999999999999999998865  3568


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-  271 (549)
                      +++|||++ ++|.+++.+...+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...... 
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            89999997 5899999888889999999999999999999999999999999999999999999999999987553211 


Q ss_pred             --ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHH
Q psy18060        272 --HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDL  347 (549)
Q Consensus       272 --~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dl  347 (549)
                        .......||..|+|||++.+..++.++|||||||++|+|++|+.||...+.......+...  ....|..++..+.++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDF  241 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHH
Confidence              1123346899999999998888999999999999999999999999877655555444433  233566788999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      |.+||. +|++||+++++++|||+.
T Consensus       242 i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         242 LKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHhc-ChhhCCCHHHHhcCcccC
Confidence            999995 999999999999999984


No 172
>KOG0604|consensus
Probab=100.00  E-value=9.6e-44  Score=345.10  Aligned_cols=251  Identities=32%  Similarity=0.538  Sum_probs=218.3

Q ss_pred             ccccceeEE-EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee----
Q psy18060        116 GALEKYQKI-CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET----  189 (549)
Q Consensus       116 ~~~~~y~~~-~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~----  189 (549)
                      ..+++|.+. ++||-|-.|.|-.|.++.|++.+|+|++...       ...++|+++.-.. .|||||+++++|++    
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~  130 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQG  130 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence            345666654 5799999999999999999999999998643       2346788876554 79999999998754    


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC---CcEEEeeccc
Q psy18060        190 LNEFVLITEFAHM-SLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD---GVAMLCDFGF  263 (549)
Q Consensus       190 ~~~~~iV~E~~~g-sL~~~l~~~~~--l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~---g~vKL~DFGl  263 (549)
                      ...+.+|||++.| .|+..|+.++.  |+|.++..|+.||+.|+.|||+.+|.||||||+|+|.+..   ..+||+|||+
T Consensus       131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence            4678999999985 79999998765  9999999999999999999999999999999999999765   4799999999


Q ss_pred             ceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCCCc-
Q psy18060        264 ARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPS-  338 (549)
Q Consensus       264 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~----~~~~~~~i~~~~~~~p~-  338 (549)
                      |+..... ....+.|-||+|.|||++...+|+..+|+||+||++|-|++|.+||....    ......+|..+.+.||. 
T Consensus       211 AK~t~~~-~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p  289 (400)
T KOG0604|consen  211 AKETQEP-GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP  289 (400)
T ss_pred             ccccCCC-ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence            9876543 34577899999999999999999999999999999999999999996543    34566789999999984 


Q ss_pred             ---cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        339 ---QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       339 ---~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                         .+|+.++++|+++|..+|.+|.|+++++.|||+...
T Consensus       290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence               579999999999999999999999999999999754


No 173
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00  E-value=4.7e-42  Score=346.22  Aligned_cols=251  Identities=33%  Similarity=0.508  Sum_probs=213.3

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |++.+.||.|++|.||+|.+..+|..||+|++............+.+|+.+++.++|||++++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            57789999999999999999999999999998765433333456788999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        201 HMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       201 ~gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      +++|.+++....  .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||+++.........+...
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~  160 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEV  160 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccc
Confidence            999999998766  799999999999999999999999999999999999999999999999999976644333334446


Q ss_pred             CCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------------
Q psy18060        279 GTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------------  332 (549)
Q Consensus       279 GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------------  332 (549)
                      +++.|+|||++.+. .++.++|||||||++|+|++|++||...+.......+...                         
T Consensus       161 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07835         161 VTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKW  240 (283)
T ss_pred             cccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccc
Confidence            78999999988654 5789999999999999999999999877654433222110                         


Q ss_pred             C----CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        333 D----VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       333 ~----~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      .    ....+.+++.+.++|.+||+.+|.+|||++|++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         241 ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            0    01124577899999999999999999999999999997


No 174
>KOG0662|consensus
Probab=100.00  E-value=2e-43  Score=320.77  Aligned_cols=257  Identities=31%  Similarity=0.507  Sum_probs=225.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .+|...++||+|.||+|++++++.+++.||+|.+.....+....+...+|+.+++.++|.|||++++.....+.+.+|+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            45777889999999999999999999999999998776665666788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      +|..+|..+... ++.++.+.++.++.|++.||.++|++++.||||||+|+||+.+|.+|++|||+|+.++.+.......
T Consensus        82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            999999999876 6779999999999999999999999999999999999999999999999999999888776666677


Q ss_pred             CCCCcccccccccCCC-CCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--------------------CC
Q psy18060        278 KGTPLYMAPELIAERP-YDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD--------------------VT  335 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~-y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~--------------------~~  335 (549)
                      +-|.+|++|.++.+.+ |+...|+||.|||+.|+.. |++.|++.+..+.+.+|...-                    +.
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~  241 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPI  241 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCC
Confidence            8899999999998754 8999999999999999985 889999999888877763210                    00


Q ss_pred             CCc---------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        336 FPS---------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       336 ~p~---------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      +|.         .++..-+++++++|.-+|.+|+++++.++||||.+..
T Consensus       242 ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  242 YPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             ccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            111         2334557999999999999999999999999998753


No 175
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00  E-value=1e-41  Score=340.43  Aligned_cols=251  Identities=31%  Similarity=0.576  Sum_probs=215.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR----SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      +|++.+.||+|+||.||+|.. .+++.+|+|.+.....    .......+.+|+.+++.++||||+++++++...+..++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            477889999999999999986 4688999999865332    12234568899999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC----
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG----  270 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~----  270 (549)
                      +|||+. ++|.+++.+...+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++......    
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            999997 589999988888999999999999999999999999999999999999999999999999998754211    


Q ss_pred             --cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHH
Q psy18060        271 --THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---DVTFPSQVSETYK  345 (549)
Q Consensus       271 --~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~  345 (549)
                        ........||..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+...   ....|..++.++.
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAI  239 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHH
Confidence              11223456899999999999888999999999999999999999999877655544433332   2345677899999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ++|.+||+++|.+||++.++++||||
T Consensus       240 ~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         240 DFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999999997


No 176
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00  E-value=3.4e-42  Score=353.27  Aligned_cols=244  Identities=29%  Similarity=0.473  Sum_probs=193.9

Q ss_pred             EEEEecCCcEEEEEEEEcC--CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe--eCCEEEEEEec
Q psy18060        124 ICLIGEGSFGKVFKAIHLD--LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE--TLNEFVLITEF  199 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~iV~E~  199 (549)
                      .+.||+|+||.||+|....  ++..||+|.+.....    ...+.+|+.+++.++||||+++++++.  ....++++|||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY   81 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence            4689999999999998654  567899999865432    234678999999999999999999884  35678999999


Q ss_pred             CCCCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEE----ecCCcEEEeeccccee
Q psy18060        200 AHMSLSNLLEQR---------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL----NKDGVAMLCDFGFARS  266 (549)
Q Consensus       200 ~~gsL~~~l~~~---------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl----~~~g~vKL~DFGla~~  266 (549)
                      ++++|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||+++.
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          82 AEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             eCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            999998887532         248899999999999999999999999999999999999    4567999999999986


Q ss_pred             cccCcc---cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHhc--
Q psy18060        267 MAVGTH---MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------HLIRLLKT--  331 (549)
Q Consensus       267 ~~~~~~---~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~---------~~~~~i~~--  331 (549)
                      ......   ......||+.|+|||++.+ ..++.++|||||||++|+|+||++||......         .....+..  
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM  241 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence            643321   2234578999999999876 45899999999999999999999999653211         00000000  


Q ss_pred             --------------------------CCC----------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        332 --------------------------QDV----------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       332 --------------------------~~~----------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                                ...          ..+...+..+.++|.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                                      000          0011235678899999999999999999999999997


No 177
>KOG0603|consensus
Probab=100.00  E-value=3.5e-43  Score=371.90  Aligned_cols=242  Identities=32%  Similarity=0.437  Sum_probs=208.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHh-cCCCCeeEEEEEEeeCCEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH-LAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      .+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+....      ..+|+.++.. -+||||+++.+.+.+....|+|
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v  394 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV  394 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecCCceeeee
Confidence            46788888899999999999999999999999999876221      2345655444 4899999999999999999999


Q ss_pred             EecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEE-ecCCcEEEeecccceecccCcccc
Q psy18060        197 TEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL-NKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       197 ~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl-~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||.+.| -|.+.+...+.+. .++..|++||+.|+.|||++|+|||||||+|||+ ++.|+++|+|||.++.....   .
T Consensus       395 ~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~---~  470 (612)
T KOG0603|consen  395 MELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS---C  470 (612)
T ss_pred             ehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh---h
Confidence            999986 4666666655555 7888999999999999999999999999999999 58899999999999876543   3


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCccCCHHHHHHHHHhch
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKTQDVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      .+.+-|..|.|||++....|++++||||||++||+||+|+.||...+.. ++..++..+  .+...+|+++++||++||+
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~--~~s~~vS~~AKdLl~~LL~  548 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMP--KFSECVSDEAKDLLQQLLQ  548 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCC--ccccccCHHHHHHHHHhcc
Confidence            4556788999999999999999999999999999999999999876655 555555433  4457899999999999999


Q ss_pred             hCcCCCCCHHHHhcCccc
Q psy18060        354 KDASQRLSWPELLHHPLV  371 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~  371 (549)
                      .||.+||++.+++.|||+
T Consensus       549 ~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  549 VDPALRLGADEIGAHPWF  566 (612)
T ss_pred             CChhhCcChhhhccCcch
Confidence            999999999999999999


No 178
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00  E-value=1.6e-41  Score=344.24  Aligned_cols=255  Identities=30%  Similarity=0.506  Sum_probs=214.4

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeC---
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETL---  190 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~---  190 (549)
                      ....++|.+.+.||+|+||.||+|....+++.+|+|++.....   ....+.+|+.+++++ +|||++++++++...   
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~   94 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL   94 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence            3446789999999999999999999999999999999865322   234567899999998 899999999988643   


Q ss_pred             --CEEEEEEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccc
Q psy18060        191 --NEFVLITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       191 --~~~~iV~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                        +..++||||++ ++|.+++..    ...+++..++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||+
T Consensus        95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~  174 (291)
T cd06639          95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGV  174 (291)
T ss_pred             CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeeccc
Confidence              35899999997 589988763    35789999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCcccccccCCCCcccccccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---C
Q psy18060        264 ARSMAVGTHMLTSIKGTPLYMAPELIAER-----PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---T  335 (549)
Q Consensus       264 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---~  335 (549)
                      +..............|+..|+|||++...     .++.++|||||||++|+|++|++||...........+.....   .
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd06639         175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL  254 (291)
T ss_pred             chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence            87665433333445789999999998543     368999999999999999999999988776655555543322   2


Q ss_pred             CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       336 ~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      .|..++..+.++|.+||+.+|.+||++.|+++||||+
T Consensus       255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            3556788999999999999999999999999999984


No 179
>KOG0612|consensus
Probab=100.00  E-value=6.5e-44  Score=393.99  Aligned_cols=264  Identities=30%  Similarity=0.460  Sum_probs=234.7

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      -..++|.++++||+|+||.|..++++.|++.||+|++++-... .....-|..|-.+|..-+.+-|++++..|++.+++|
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY  151 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY  151 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence            3457899999999999999999999999999999999873321 234467888999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc-cCcc
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA-VGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~-~~~~  272 (549)
                      +||||++ |+|..++.+..+++|..+++++..|+.||.-||+.|+|||||||.|||||..|++||+|||.+-.+. .+.-
T Consensus       152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V  231 (1317)
T KOG0612|consen  152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV  231 (1317)
T ss_pred             EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcE
Confidence            9999976 6999999998899999999999999999999999999999999999999999999999999886665 3444


Q ss_pred             cccccCCCCccccccccc----C-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCC--ccCCHH
Q psy18060        273 MLTSIKGTPLYMAPELIA----E-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFP--SQVSET  343 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~----~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p--~~~s~~  343 (549)
                      .....+|||.|.+||++.    + +.|+..+|+||+||++|||+.|..||...+..+++.+|..-  .+.||  ..+|++
T Consensus       232 ~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSee  311 (1317)
T KOG0612|consen  232 RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEE  311 (1317)
T ss_pred             EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHH
Confidence            455678999999999984    2 56999999999999999999999999999999999998765  56788  569999


Q ss_pred             HHHHHHHhchhCcCCCCC---HHHHhcCcccCcccchhhh
Q psy18060        344 YKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       344 ~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~~  380 (549)
                      +++||.+++. +|..|.+   ++++..||||.+..+..+.
T Consensus       312 akdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR  350 (1317)
T KOG0612|consen  312 AKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIR  350 (1317)
T ss_pred             HHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhh
Confidence            9999999886 6778888   9999999999998885553


No 180
>KOG0586|consensus
Probab=100.00  E-value=7.2e-43  Score=367.78  Aligned_cols=264  Identities=31%  Similarity=0.493  Sum_probs=246.5

Q ss_pred             cccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        113 KSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       113 ~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      ........|.+.+.||+|.|++|..+.+..++..||||.+.+...+......+.+|+++|..++|||||+++.+.+....
T Consensus        50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT  129 (596)
T ss_pred             cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence            34556778999999999999999999999999999999999998888877789999999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      +|+||||+. |.++++|.+++.+.+..++.++.|++.|++|||+++|+|||||++||||+.+-.+||+|||++..+..+ 
T Consensus       130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-  208 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-  208 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-
Confidence            999999987 689999999999999999999999999999999999999999999999999999999999999988754 


Q ss_pred             ccccccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~  350 (549)
                      ....++||++.|.|||++.+.+|+ +.+|+||+|+++|.|+.|..||.+.+..........+.+.+|-.++.++.++|++
T Consensus       209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk  288 (596)
T KOG0586|consen  209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRK  288 (596)
T ss_pred             ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHH
Confidence            567889999999999999998875 7899999999999999999999999998888888888888888899999999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        351 LLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      +|.++|.+|++.++++.|+|+......
T Consensus       289 ~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  289 FLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hhccCccccCCHHHhhhhcccchhhhh
Confidence            999999999999999999999765544


No 181
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00  E-value=1.5e-41  Score=336.75  Aligned_cols=251  Identities=32%  Similarity=0.588  Sum_probs=218.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      +|+..+.||+|++|.||+|....++..|++|.+.....   .......+.+|+.+++.++||||+++++++.....++++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            46778899999999999999998899999999875432   234456788999999999999999999999999999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++ ++|.+++.+...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++....... ...
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~  159 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAK  159 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-ccc
Confidence            99997 4899999888889999999999999999999999999999999999999999999999999987654432 234


Q ss_pred             ccCCCCcccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCCCCCccCCHHHHHHHHHhc
Q psy18060        276 SIKGTPLYMAPELIAERP-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT--QDVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~-y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ...|++.|+|||.+.... ++.++|+|||||++|+|++|+.||...........+..  ....+|..+++.+.+++.+||
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHh
Confidence            567899999999987766 89999999999999999999999987765544444433  223456678999999999999


Q ss_pred             hhCcCCCCCHHHHhcCccc
Q psy18060        353 EKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~  371 (549)
                      +.+|.+|||+.+++.|||+
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999996


No 182
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00  E-value=1.7e-41  Score=344.15  Aligned_cols=254  Identities=29%  Similarity=0.429  Sum_probs=208.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence            347799999999999999999999999999999998654322 2223567899999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||++++|.+.+..+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||+++..........
T Consensus        82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            999998888777653 5688899999999999999999999999999999999999999999999999876543333334


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcC---------------------
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL-HLIRLLKTQ---------------------  332 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~-~~~~~i~~~---------------------  332 (549)
                      ...+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.. +.+..+...                     
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            4568999999999865 45889999999999999999999999765432 221111100                     


Q ss_pred             --CCCCCc---------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        333 --DVTFPS---------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       333 --~~~~p~---------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                        ....+.         ..++.+.+++.+||..||.+|||+.|++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence              000000         135788999999999999999999999999997


No 183
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=100.00  E-value=5.8e-42  Score=342.23  Aligned_cols=253  Identities=27%  Similarity=0.504  Sum_probs=215.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC----hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS----GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      +|+..+.||+|++|.||++.+..+++.+|+|.+......    ......+.+|+++++.++||||+++++++...+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477889999999999999999999999999998754321    2235678899999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeecccceecccCcc-
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGTH-  272 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~~-  272 (549)
                      ||||+. ++|.+++.+.+.+++..+..++.||+.||.|||++|++||||||+||+++.++ .+||+|||.+........ 
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            999988 58999998888899999999999999999999999999999999999998776 599999999876643211 


Q ss_pred             ---cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHh--cCCCCCCccCCHHH
Q psy18060        273 ---MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---HLIRLLK--TQDVTFPSQVSETY  344 (549)
Q Consensus       273 ---~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~---~~~~~i~--~~~~~~p~~~s~~~  344 (549)
                         ......||..|+|||++.+..++.++|+|||||++++|++|..||...+..   .....+.  .....+|..+++++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGL  240 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHH
Confidence               112346889999999998888999999999999999999999999754432   2222221  22345667789999


Q ss_pred             HHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        345 KDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       345 ~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      .+++.+||..+|.+|||+.++++||||+
T Consensus       241 ~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         241 RDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999999984


No 184
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00  E-value=2.2e-41  Score=336.21  Aligned_cols=248  Identities=29%  Similarity=0.523  Sum_probs=218.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++||||+++++.+...+.+|++|||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            58899999999999999999999999999999865432 33456778899999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ++ ++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++...........
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT  159 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence            97 5899888653  45899999999999999999999999999999999999999999999999999876544333445


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhchhC
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L~~d  355 (549)
                      ..|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+..+.. ..|..++..+.++|.+||+.|
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  239 (255)
T cd08219         160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRN  239 (255)
T ss_pred             ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCC
Confidence            6799999999999988899999999999999999999999998887777666655543 356778999999999999999


Q ss_pred             cCCCCCHHHHhcC
Q psy18060        356 ASQRLSWPELLHH  368 (549)
Q Consensus       356 P~~Rps~~elL~H  368 (549)
                      |.+|||+.+++.-
T Consensus       240 P~~Rp~~~~il~~  252 (255)
T cd08219         240 PRSRPSATTILSR  252 (255)
T ss_pred             cccCCCHHHHhhc
Confidence            9999999999864


No 185
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=100.00  E-value=3.6e-42  Score=356.96  Aligned_cols=260  Identities=28%  Similarity=0.461  Sum_probs=216.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe----eCCEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE----TLNEFV  194 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~----~~~~~~  194 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++.    ....++
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            6799999999999999999999999999999998765433344566778999999999999999988775    335689


Q ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--
Q psy18060        195 LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--  272 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--  272 (549)
                      +||||++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++........  
T Consensus        85 lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          85 VVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             EEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC
Confidence            999999999999998888899999999999999999999999999999999999999999999999999976543221  


Q ss_pred             --cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc------------------
Q psy18060        273 --MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT------------------  331 (549)
Q Consensus       273 --~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~------------------  331 (549)
                        ......|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+..                  
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  244 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRV  244 (334)
T ss_pred             CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhH
Confidence              1234578999999999865 5689999999999999999999999987654433322111                  


Q ss_pred             ------CC--CCC-----CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccchh
Q psy18060        332 ------QD--VTF-----PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       332 ------~~--~~~-----p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~  378 (549)
                            ..  ...     .+..++++.++|.+||+.+|.+|||+.+++.||||.......
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         245 RKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             HHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence                  00  011     134689999999999999999999999999999998654433


No 186
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00  E-value=1.4e-41  Score=342.07  Aligned_cols=248  Identities=30%  Similarity=0.490  Sum_probs=207.2

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeC--CEEEEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETL--NEFVLIT  197 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~--~~~~iV~  197 (549)
                      |++.+.||+|+||.||+|.+..+++.+|+|.+.+....... ....+|+.++.++. ||||+++++++.+.  +.+++||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            67889999999999999999999999999998754332222 23356888888885 99999999999877  8899999


Q ss_pred             ecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||++++|.+.+..+ ..+++..+..++.|++.||.|||+.|++||||||+||+++. +.+||+|||+++...... ..+.
T Consensus        80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-~~~~  157 (282)
T cd07831          80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-PYTE  157 (282)
T ss_pred             ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC-CcCC
Confidence            99999999888764 57899999999999999999999999999999999999999 999999999997664332 2234


Q ss_pred             cCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc------------------CCCCCC
Q psy18060        277 IKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT------------------QDVTFP  337 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~------------------~~~~~p  337 (549)
                      ..+|+.|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+....+..                  ....+|
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFP  237 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCc
Confidence            568999999998644 5578999999999999999999999988776554443321                  011111


Q ss_pred             -----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        338 -----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       338 -----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                 +.++..+.++|.+||.++|.+|||+.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         238 SKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                       2468999999999999999999999999999997


No 187
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=100.00  E-value=8.7e-42  Score=344.57  Aligned_cols=253  Identities=31%  Similarity=0.546  Sum_probs=214.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.+.||||+++++++...+..+++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36999999999999999999999999999999987544444445678999999999999999999999999999999999


Q ss_pred             cCCCCHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cccc
Q psy18060        199 FAHMSLSNL-LEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-MLTS  276 (549)
Q Consensus       199 ~~~gsL~~~-l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~~~  276 (549)
                      |+++++... +.+...+++..+..++.||+.||.|||++|++||||+|+||+++.++.+||+|||++........ ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            999765544 45556799999999999999999999999999999999999999999999999999877654432 3345


Q ss_pred             cCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------C---
Q psy18060        277 IKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------D---  333 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~---  333 (549)
                      ..++..|+|||++.+. .++.++||||||+++|+|++|++||.+.+.......+...                   .   
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            6789999999999887 8899999999999999999999999876554433322110                   0   


Q ss_pred             ----------CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        334 ----------VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       334 ----------~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                ..+|..+++++.+||.+||..+|.+|||++++++||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                      01233458899999999999999999999999999997


No 188
>KOG0696|consensus
Probab=100.00  E-value=2e-43  Score=354.48  Aligned_cols=269  Identities=26%  Similarity=0.494  Sum_probs=242.0

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ..+|..+.+||+|+||+|.++..+.+.+.||||++++... .....+--..|-++|... +-|.+++++.+|++-+.+|+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            4679999999999999999999999999999999977542 111222234566666655 67899999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||||++ |+|--.|++-++|.|..+..++.+|+-||-+||++|||.||||..|||++.+|++||+|||+++.--.+....
T Consensus       428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT  507 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT  507 (683)
T ss_pred             EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcce
Confidence            999998 5899999999999999999999999999999999999999999999999999999999999997655555666


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchh
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      .++||||.|+|||++..++|+.++|+||+||+||||+.|++||.+.+..++.+.|......+|..+|.++.++.+..|.+
T Consensus       508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK  587 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTK  587 (683)
T ss_pred             eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhc
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCH-----HHHhcCcccCcccchhhhhccCcc
Q psy18060        355 DASQRLSW-----PELLHHPLVKDNLSSEIESQNNQD  386 (549)
Q Consensus       355 dP~~Rps~-----~elL~Hpw~~~~~~~~~~~~~~~~  386 (549)
                      .|.+|+.+     .+|..||||+...+..++....+.
T Consensus       588 ~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqP  624 (683)
T KOG0696|consen  588 HPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQP  624 (683)
T ss_pred             CCccccCCCCccccchhhCcchhhccHHHHhhccCCC
Confidence            99999975     789999999999888887665554


No 189
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=100.00  E-value=1.4e-41  Score=342.74  Aligned_cols=251  Identities=29%  Similarity=0.479  Sum_probs=212.7

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||.|++|.||+|.+..+|..||+|.+...... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            588999999999999999999999999999998764322 2235567899999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AHMSLSNLLEQR---KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~gsL~~~l~~~---~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      +.++|.+++...   ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++...........
T Consensus        80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (284)
T cd07836          80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN  159 (284)
T ss_pred             CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence            999999988764   35899999999999999999999999999999999999999999999999999765443333344


Q ss_pred             cCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------CCC--
Q psy18060        277 IKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------DVT--  335 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------~~~--  335 (549)
                      ..+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+...                  ...  
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP  239 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence            568899999999865 45789999999999999999999999877655444332210                  000  


Q ss_pred             ---------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 ---------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 ---------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                               +.+..++.+.++|.+||+.||.+||++.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                     112457889999999999999999999999999998


No 190
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00  E-value=5.1e-42  Score=356.41  Aligned_cols=257  Identities=30%  Similarity=0.494  Sum_probs=215.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC-----CEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL-----NEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~~  193 (549)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            579999999999999999999999999999999875433333445677899999999999999999877543     358


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        194 VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      |++|||++++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++........
T Consensus        85 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~  164 (337)
T cd07858          85 YIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF  164 (337)
T ss_pred             EEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc
Confidence            99999999999999998889999999999999999999999999999999999999999999999999999766543333


Q ss_pred             ccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---------------------
Q psy18060        274 LTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT---------------------  331 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~---------------------  331 (549)
                      .....||..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+..                     
T Consensus       165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (337)
T cd07858         165 MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRY  244 (337)
T ss_pred             ccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHH
Confidence            345578999999998865 5689999999999999999999999987654333222210                     


Q ss_pred             ------C-CC---CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        332 ------Q-DV---TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       332 ------~-~~---~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                            . ..   ...+.+++++.++|.+||+.+|.+|||++++++||||....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         245 IRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence                  0 00   01235789999999999999999999999999999997643


No 191
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00  E-value=2.7e-41  Score=335.97  Aligned_cols=254  Identities=30%  Similarity=0.529  Sum_probs=224.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|++|.||+|.+..+++.+|+|.+...... .....+.+|+.+++.++||||+++++.+...+..+++||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            3688999999999999999999999999999998765432 445778999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |++ ++|.+++.....+++..+..++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||++............
T Consensus        80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~  159 (264)
T cd06623          80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNT  159 (264)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccc
Confidence            998 6899999988899999999999999999999999 99999999999999999999999999999877654443345


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcC-CCCCCcc-CCHHHHHHHHHh
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV---SILHLIRLLKTQ-DVTFPSQ-VSETYKDLVKGL  351 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~---~~~~~~~~i~~~-~~~~p~~-~s~~~~dlI~~~  351 (549)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|+.||...   ...+....+... ....+.. ++..+.++|.+|
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (264)
T cd06623         160 FVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC  239 (264)
T ss_pred             eeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHH
Confidence            57899999999999889999999999999999999999999776   455555555433 2334555 899999999999


Q ss_pred             chhCcCCCCCHHHHhcCcccCc
Q psy18060        352 LEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      |..+|.+|||+.++++|||++.
T Consensus       240 l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         240 LQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             ccCChhhCCCHHHHHhCHHHHh
Confidence            9999999999999999999964


No 192
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00  E-value=1.7e-41  Score=339.10  Aligned_cols=252  Identities=34%  Similarity=0.549  Sum_probs=213.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCC----
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLN----  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~----  191 (549)
                      ..++|++.+.||+|++|.||+|.+..+++.+++|++.....   ....+.+|+.+++++ .||||+++++++....    
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            34789999999999999999999998999999999875432   345788999999998 7999999999986544    


Q ss_pred             --EEEEEEecCCC-CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        192 --EFVLITEFAHM-SLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       192 --~~~iV~E~~~g-sL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                        .+++||||+.+ +|.+++..    ...+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence              58999999985 89888865    357999999999999999999999999999999999999999999999999998


Q ss_pred             eecccCcccccccCCCCcccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CC
Q psy18060        265 RSMAVGTHMLTSIKGTPLYMAPELIAE-----RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---TF  336 (549)
Q Consensus       265 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---~~  336 (549)
                      ..............|++.|+|||++..     ..++.++|||||||++|+|++|+.||...........+.....   ..
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS  240 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc
Confidence            766543333455678999999998753     3478899999999999999999999987665555544444322   22


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +..+++.+++||.+||..||.+|||+.++++|||+
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            33478899999999999999999999999999996


No 193
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00  E-value=1.5e-41  Score=336.76  Aligned_cols=252  Identities=30%  Similarity=0.544  Sum_probs=219.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|.+.+.||+|+||.||+|....++..+|+|.+............+.+|+.+++.++||||+++++.+......++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            58899999999999999999999999999999876544444556788999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeecccceecccCccccc
Q psy18060        200 AH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       200 ~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~~~~~  275 (549)
                      +. ++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++.++ .+||+|||.+...........
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            97 58999987643  479999999999999999999999999999999999999886 469999999977654433334


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhchh
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L~~  354 (549)
                      ...|++.|+|||++.+..++.++|+|||||++++|++|..||...+.......+..... ..++.++..+.++|.+||..
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  240 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKV  240 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhcc
Confidence            45689999999999888899999999999999999999999988777666655544432 34567889999999999999


Q ss_pred             CcCCCCCHHHHhcCccc
Q psy18060        355 DASQRLSWPELLHHPLV  371 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~  371 (549)
                      +|.+|||+.++++||||
T Consensus       241 ~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         241 SPRDRPSITSILKRPFL  257 (257)
T ss_pred             ChhhCcCHHHHhhCCCC
Confidence            99999999999999997


No 194
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00  E-value=2.1e-41  Score=342.03  Aligned_cols=257  Identities=30%  Similarity=0.515  Sum_probs=213.5

Q ss_pred             ccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEe--
Q psy18060        112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHE--  188 (549)
Q Consensus       112 ~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~--  188 (549)
                      .......++|++.+.||+|+||.||+|.+..+++.+|+|+.....   .....+.+|+.+++.+ +||||+++++++.  
T Consensus        11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638          11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            334456688999999999999999999999999999999876432   2234677899999999 7999999999873  


Q ss_pred             ---eCCEEEEEEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEee
Q psy18060        189 ---TLNEFVLITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCD  260 (549)
Q Consensus       189 ---~~~~~~iV~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~D  260 (549)
                         ..+.+++||||++ ++|.+++..    ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~d  167 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVD  167 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEcc
Confidence               4467899999997 589888753    35689999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCcccccccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--
Q psy18060        261 FGFARSMAVGTHMLTSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--  333 (549)
Q Consensus       261 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--  333 (549)
                      ||+++.............||+.|+|||++.     +..++.++|||||||++|+|++|+.||...........+....  
T Consensus       168 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~  247 (286)
T cd06638         168 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPP  247 (286)
T ss_pred             CCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCC
Confidence            999987654333334457999999999975     3458899999999999999999999998776544443332221  


Q ss_pred             -CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        334 -VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       334 -~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                       ...|..++..+.++|.+||+.||.+|||+.|+++||||
T Consensus       248 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         248 TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence             22345678899999999999999999999999999997


No 195
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00  E-value=3.6e-41  Score=335.42  Aligned_cols=252  Identities=33%  Similarity=0.595  Sum_probs=217.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+.+++.++||||+++++.+...+.+++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            58899999999999999999998999999999987655445678899999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc----
Q psy18060        200 AH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML----  274 (549)
Q Consensus       200 ~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~----  274 (549)
                      +. ++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.+||+|||++..........    
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence            98 5899999888789999999999999999999999999999999999999999999999999987764332211    


Q ss_pred             cccCCCCcccccccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhc-CCCCCCcc--CCHHHHHH
Q psy18060        275 TSIKGTPLYMAPELIAERP---YDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKT-QDVTFPSQ--VSETYKDL  347 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~---y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~~-~~~~~p~~--~s~~~~dl  347 (549)
                      ....+++.|+|||++.+..   ++.++||||||+++|+|++|+.||...+ .......+.. ....+|..  +++.+.+|
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDF  240 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHH
Confidence            2356889999999997765   8899999999999999999999997653 2222222322 23344544  48999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCccc
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      |.+||+.+|.+|||+.+++.|||+
T Consensus       241 i~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         241 LDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHccCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999996


No 196
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00  E-value=8e-42  Score=342.72  Aligned_cols=253  Identities=33%  Similarity=0.561  Sum_probs=226.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ++|.+.+.||+|+||.||+|....+++.+|+|++.+... .......+.+|..+++++. ||||+++++++...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            468999999999999999999999999999999876432 2334467888999999998 99999999999999999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc----
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT----  271 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~----  271 (549)
                      ||++. ++|.+++.+.+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.+|.++|+|||++.......    
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            99995 7999999998899999999999999999999999999999999999999999999999999987654322    


Q ss_pred             ----------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC
Q psy18060        272 ----------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT  335 (549)
Q Consensus       272 ----------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~  335 (549)
                                      .......|+..|+|||++.+..++.++|+||||++++++++|+.||...+.......+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  240 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS  240 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC
Confidence                            1122346789999999998888999999999999999999999999988877777777777778


Q ss_pred             CCccCCHHHHHHHHHhchhCcCCCCCH----HHHhcCccc
Q psy18060        336 FPSQVSETYKDLVKGLLEKDASQRLSW----PELLHHPLV  371 (549)
Q Consensus       336 ~p~~~s~~~~dlI~~~L~~dP~~Rps~----~elL~Hpw~  371 (549)
                      +|..+++.+.+||.+||+.+|.+|||+    +++++||||
T Consensus       241 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         241 FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            888999999999999999999999999    999999997


No 197
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=8e-42  Score=345.35  Aligned_cols=253  Identities=26%  Similarity=0.485  Sum_probs=215.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++++.||+|+||.||+|.+..++..||+|.+... ........+.+|+.++++++||||+++++.+...+.+++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            3688999999999999999999999999999998653 234445678899999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        199 FAHM-SLSNLLEQR---KKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       199 ~~~g-sL~~~l~~~---~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      |++| +|..++...   ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++.++|+|||++......  .
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~--~  157 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS--L  157 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--c
Confidence            9985 788888763   379999999999999999999997 59999999999999999999999999998765322  2


Q ss_pred             ccccCCCCcccccccccCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---Hhc-CCCCCCccCCHH
Q psy18060        274 LTSIKGTPLYMAPELIAER------PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRL---LKT-QDVTFPSQVSET  343 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~------~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~---i~~-~~~~~p~~~s~~  343 (549)
                      .....|++.|+|||++.+.      .++.++|+|||||++|+|++|+.||...........   +.. .....|+.++++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd06622         158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDD  237 (286)
T ss_pred             cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHH
Confidence            2345688999999998543      358899999999999999999999976554443322   222 234566779999


Q ss_pred             HHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       344 ~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +.+||.+||+.+|.+||++.+++.||||...
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         238 AQDFVAKCLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             HHHHHHHHcccCcccCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999999654


No 198
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00  E-value=2.1e-41  Score=341.19  Aligned_cols=254  Identities=33%  Similarity=0.548  Sum_probs=221.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ..|+..+.||.|+||.||+|.+..++..+|+|.+.... .......+.+|+.+++.+.||||+++++.+.+.+..++|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            35778899999999999999999999999999987542 23445788899999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |++ ++|.+++.. .++++.++..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.............
T Consensus        83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06640          83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence            997 589998875 578999999999999999999999999999999999999999999999999997765443333445


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCc
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      .++..|+|||++.+..++.++|+|||||++|+|++|+.||...........+... ....+..++..+.+++.+||..+|
T Consensus       162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCc
Confidence            6889999999998888999999999999999999999999887766665554333 233455678899999999999999


Q ss_pred             CCCCCHHHHhcCcccCcc
Q psy18060        357 SQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       357 ~~Rps~~elL~Hpw~~~~  374 (549)
                      .+||++.++++||||...
T Consensus       242 ~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         242 SFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             ccCcCHHHHHhChHhhhc
Confidence            999999999999999654


No 199
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00  E-value=1.9e-41  Score=342.00  Aligned_cols=252  Identities=29%  Similarity=0.510  Sum_probs=211.2

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEe------e
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHE------T  189 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~------~  189 (549)
                      ....|++.+.||+|+||.||+|.+..+++.+|+|++....   .....+..|+.+++.+ +||||+++++++.      .
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            4467999999999999999999999999999999986532   3345678899999888 7999999999874      3


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      .+.++++|||++ |+|.+++...  ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~  170 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  170 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence            467899999998 5899998763  4588999999999999999999999999999999999999999999999999876


Q ss_pred             cccCcccccccCCCCccccccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C-CCcc
Q psy18060        267 MAVGTHMLTSIKGTPLYMAPELIA-----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-T-FPSQ  339 (549)
Q Consensus       267 ~~~~~~~~~~~~GT~~Y~APE~l~-----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~-~p~~  339 (549)
                      ............|++.|+|||++.     +..++.++|||||||++|+|++|..||...........+..... . .+..
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  250 (282)
T cd06636         171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKK  250 (282)
T ss_pred             hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccc
Confidence            543322334567999999999985     35688899999999999999999999987665544443333221 1 2235


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ++.++.+||.+||+.||.+|||+.|+++||||
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            88999999999999999999999999999997


No 200
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=100.00  E-value=6.6e-41  Score=330.94  Aligned_cols=252  Identities=35%  Similarity=0.589  Sum_probs=224.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|.+.+.||+|++|.||++.+..+++.||+|.+............+.+|+++++.+.|||++++++++...+..+++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            47889999999999999999999999999999987665555667899999999999999999999999999999999999


Q ss_pred             CCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      +.+ +|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..............
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  160 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVV  160 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccc
Confidence            985 8999999888999999999999999999999999999999999999999999999999999987765444334567


Q ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-hcCCCCCCccCCHHHHHHHHHhchhCcC
Q psy18060        279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL-KTQDVTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       279 GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i-~~~~~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      |+..|+|||...+..++.++||||||+++|+|++|..||...+.......+ ......+|..+++.+.+++.+||..+|+
T Consensus       161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  240 (254)
T cd06627         161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPN  240 (254)
T ss_pred             cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChh
Confidence            899999999998888999999999999999999999999876654443333 3444556778999999999999999999


Q ss_pred             CCCCHHHHhcCccc
Q psy18060        358 QRLSWPELLHHPLV  371 (549)
Q Consensus       358 ~Rps~~elL~Hpw~  371 (549)
                      +|||+.+++.||||
T Consensus       241 ~R~~~~~~l~~~~~  254 (254)
T cd06627         241 LRPTAKQLLKHPWI  254 (254)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999997


No 201
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00  E-value=2.5e-41  Score=338.86  Aligned_cols=249  Identities=20%  Similarity=0.340  Sum_probs=212.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEc---CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHL---DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..+|++.+.||+|+||.||+|.+.   ..+..+|+|.+... .+......+.+|+.++++++||||+++++++...+..+
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence            356999999999999999999765   44678999998654 23344567889999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +||||++ |+|.+++... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+........
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~  162 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI  162 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence            9999998 5899888764 5789999999999999999999999999999999999999999999999998765432211


Q ss_pred             c-ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHH
Q psy18060        273 M-LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVK  349 (549)
Q Consensus       273 ~-~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~  349 (549)
                      . .....+++.|+|||.+.+..++.++|||||||++|++++ |..||...+.......+..+ ..+.|..++..+.+++.
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (266)
T cd05064         163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLML  242 (266)
T ss_pred             hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence            1 112345678999999999999999999999999999775 99999998888777776654 33556788999999999


Q ss_pred             HhchhCcCCCCCHHHHhc
Q psy18060        350 GLLEKDASQRLSWPELLH  367 (549)
Q Consensus       350 ~~L~~dP~~Rps~~elL~  367 (549)
                      +||+.+|.+|||+.+|++
T Consensus       243 ~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         243 DCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHcCCCchhCCCHHHHHH
Confidence            999999999999999865


No 202
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00  E-value=2.7e-41  Score=341.60  Aligned_cols=249  Identities=30%  Similarity=0.431  Sum_probs=206.5

Q ss_pred             EEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH-HHHHHHHHHHHH---HhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQ---KHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~Ei~il---~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      .||+|+||.||++.+..+++.+|+|.+.+...... ......+|..++   ....||||+.+++.+...+..++||||+.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            38999999999999999999999999876443211 122334444433   34479999999999999999999999988


Q ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCC
Q psy18060        202 -MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT  280 (549)
Q Consensus       202 -gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT  280 (549)
                       ++|.+++..++.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......  ......||
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~  158 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGT  158 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--CccCcCCC
Confidence             589999998889999999999999999999999999999999999999999999999999998755432  22344699


Q ss_pred             Cccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        281 PLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVS---ILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       281 ~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~---~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      +.|+|||.+. +..++.++||||+||++|+|++|..||....   ..............+|+.+++++.++|.+||..||
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (279)
T cd05633         159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDV  238 (279)
T ss_pred             cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence            9999999986 4668999999999999999999999997542   22333333344556778899999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccCcccc
Q psy18060        357 SQRL-----SWPELLHHPLVKDNLS  376 (549)
Q Consensus       357 ~~Rp-----s~~elL~Hpw~~~~~~  376 (549)
                      .+||     |++++++||||++...
T Consensus       239 ~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         239 SKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             HHhcCCCCCCHHHHHhCccccCCCH
Confidence            9999     6999999999987543


No 203
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=100.00  E-value=2.1e-41  Score=341.28  Aligned_cols=249  Identities=31%  Similarity=0.462  Sum_probs=213.6

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||+|+||.||+|.+..+|+.+|+|.+...... ......+.+|+++++.++||||+++++.+...+..|+||||++ ++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999999999999999998754322 2234456789999999999999999999999999999999998 589


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCc
Q psy18060        205 SNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPL  282 (549)
Q Consensus       205 ~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~  282 (549)
                      .+++.+..  .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.+...... .......|+..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCCCC
Confidence            99998765  7999999999999999999999999999999999999999999999999998765432 22234568889


Q ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCC
Q psy18060        283 YMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI----LHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQ  358 (549)
Q Consensus       283 Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~----~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~  358 (549)
                      |+|||++.+..++.++|||||||++|+|++|+.||.....    ......+.......|+.+++.+.++|.+||+.+|.+
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEK  239 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhH
Confidence            9999999888899999999999999999999999976543    333334444555677788999999999999999999


Q ss_pred             CC-----CHHHHhcCcccCcccc
Q psy18060        359 RL-----SWPELLHHPLVKDNLS  376 (549)
Q Consensus       359 Rp-----s~~elL~Hpw~~~~~~  376 (549)
                      ||     ++.+++.||||.+...
T Consensus       240 R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         240 RLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             ccCCCcccHHHHHhChhhhcCCh
Confidence            99     8889999999976544


No 204
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00  E-value=1.8e-41  Score=342.07  Aligned_cols=250  Identities=22%  Similarity=0.402  Sum_probs=216.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCC-----ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      .++|++.+.||+|+||.||+|.....+     ..+|+|.+... ........+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP   82 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence            457899999999999999999876555     67999998643 233445678899999999999999999999998899


Q ss_pred             EEEEEecCC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQR----------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV  255 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~----------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~  255 (549)
                      .+++|||+. ++|.+++...                ..+++..+..++.|++.||.|||++|++||||||+||++++++.
T Consensus        83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~  162 (283)
T cd05048          83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT  162 (283)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence            999999987 6899999765                45788899999999999999999999999999999999999999


Q ss_pred             EEEeecccceecccCc--ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC
Q psy18060        256 AMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ  332 (549)
Q Consensus       256 vKL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~  332 (549)
                      ++|+|||+++......  .......+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+
T Consensus       163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05048         163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR  242 (283)
T ss_pred             EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999997653321  12234457889999999988889999999999999999998 99999998888888777655


Q ss_pred             C-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        333 D-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       333 ~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      . ...|..+|+++.+++.+||+.||.+||++.||+++
T Consensus       243 ~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         243 QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            4 34567899999999999999999999999999875


No 205
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00  E-value=7.1e-42  Score=341.00  Aligned_cols=252  Identities=30%  Similarity=0.508  Sum_probs=217.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|+..+.||+|++|.||++.+..+++.+|+|.+..... ......+.+|+++++.+.||||+++++.+...+.+++++|+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            57788899999999999999999999999999876533 34456788999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        200 AH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       200 ~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ++ ++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||.+........  ..
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~  158 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--KT  158 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh--hc
Confidence            99 6899999876 789999999999999999999999 9999999999999999999999999999876543221  22


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcC-CCCCCcc-CCHHHHHHHH
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV-----SILHLIRLLKTQ-DVTFPSQ-VSETYKDLVK  349 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-----~~~~~~~~i~~~-~~~~p~~-~s~~~~dlI~  349 (549)
                      ..|+..|+|||.+.+..++.++|||||||++|+|++|..||...     ........+... ....|.. +++++.++|.
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN  238 (265)
T ss_pred             ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHH
Confidence            67899999999999889999999999999999999999999754     233333333333 2334444 8999999999


Q ss_pred             HhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        350 GLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       350 ~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +||..||.+|||+.+++.||||+..
T Consensus       239 ~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         239 LCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHcCCCchhCcCHHHHhhCchhhcc
Confidence            9999999999999999999999754


No 206
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00  E-value=7.7e-42  Score=353.08  Aligned_cols=257  Identities=29%  Similarity=0.470  Sum_probs=221.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----EEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----EFV  194 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~  194 (549)
                      +|++.+.||.|++|.||+|.+..+++.+|+|.+............+.+|+.+++.++||||+++++++...+     .+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            588999999999999999999999999999998765433445567889999999999999999999887765     789


Q ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc---
Q psy18060        195 LITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT---  271 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~---  271 (549)
                      ++|||++++|.+++..+..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......   
T Consensus        81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~  160 (330)
T cd07834          81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK  160 (330)
T ss_pred             EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999998765442   


Q ss_pred             ccccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---------------
Q psy18060        272 HMLTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---------------  335 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---------------  335 (549)
                      .......+|+.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.......+......               
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  240 (330)
T cd07834         161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKAR  240 (330)
T ss_pred             ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchh
Confidence            123445689999999999877 7899999999999999999999999887766555444321100               


Q ss_pred             ----------------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        336 ----------------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       336 ----------------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                                      ..+.+++.+.++|.+||+++|.+|||+++++.||||.+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         241 NYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             hHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence                            11346889999999999999999999999999999986544


No 207
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00  E-value=4.7e-41  Score=343.44  Aligned_cols=247  Identities=22%  Similarity=0.353  Sum_probs=204.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcC----------------CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLD----------------LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK  182 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~----------------~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~  182 (549)
                      ++|.+.+.||+|+||.||+|.+..                ++..||+|.+... ........+.+|++++.+++||||++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            578999999999999999997543                3447999998653 23444567889999999999999999


Q ss_pred             EEEEEeeCCEEEEEEecCC-CCHHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q psy18060        183 FIASHETLNEFVLITEFAH-MSLSNLLEQRK-------------------KLSETICVQILSNLISALYYLHSNRVLHRD  242 (549)
Q Consensus       183 l~~~~~~~~~~~iV~E~~~-gsL~~~l~~~~-------------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrD  242 (549)
                      +++++...+..++||||+. |+|.+++....                   .+++..+..++.||+.||.|||+.||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999999997 58999986532                   367788999999999999999999999999


Q ss_pred             ccCCcEEEecCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCC
Q psy18060        243 LKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM--GHPPFK  318 (549)
Q Consensus       243 IKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt--G~~Pf~  318 (549)
                      |||+|||++.++.+||+|||+++.......  ......++..|+|||++.+..++.++|||||||++|+|++  |..||.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence            999999999999999999999976543321  1223346788999999988889999999999999999986  678888


Q ss_pred             CCCHHHHHHHHhc--------CCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHh
Q psy18060        319 TVSILHLIRLLKT--------QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELL  366 (549)
Q Consensus       319 ~~~~~~~~~~i~~--------~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL  366 (549)
                      ..+.......+..        .....|+.+++.+.+++.+||+.||.+|||+.+|.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            7766655543321        11234567899999999999999999999999984


No 208
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00  E-value=3.7e-41  Score=340.29  Aligned_cols=252  Identities=29%  Similarity=0.441  Sum_probs=211.0

Q ss_pred             EEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHH-HHHHHHH---HHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE-LSSLKQE---CEIQKHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~~~E---i~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      .||+|+||.||+|.+..+++.||+|.+.+....... .....+|   .++++...||+|+.+++.+...+..++||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            389999999999999999999999998764322111 1122333   334555689999999999999999999999997


Q ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCC
Q psy18060        202 -MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT  280 (549)
Q Consensus       202 -gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT  280 (549)
                       ++|..++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++.....  ......||
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~  158 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGT  158 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCCC
Confidence             589999988888999999999999999999999999999999999999999999999999998755432  22345799


Q ss_pred             CcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCc
Q psy18060        281 PLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTV---SILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       281 ~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~---~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      ..|+|||++.+ ..++.++||||+||++|+|++|+.||...   ........+......+|..+++++.+++.+||..+|
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p  238 (278)
T cd05606         159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDV  238 (278)
T ss_pred             cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence            99999999875 46899999999999999999999999876   444444455555667788889999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccCcccchhh
Q psy18060        357 SQRL-----SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       357 ~~Rp-----s~~elL~Hpw~~~~~~~~~  379 (549)
                      .+||     ++.++++||||++......
T Consensus       239 ~~R~~~~~~~~~~ll~~~~~~~~~~~~~  266 (278)
T cd05606         239 NRRLGCLGRGAQEVKEHPFFRSLDWQMV  266 (278)
T ss_pred             HhccCCCCCCHHHHHhCccccCCCchHh
Confidence            9999     9999999999987654433


No 209
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=100.00  E-value=6.7e-41  Score=330.88  Aligned_cols=252  Identities=37%  Similarity=0.626  Sum_probs=225.2

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|.+.+.||.|+||.||++.+..++..+|+|++............+.+|+++++.++|||++++.+.+......++++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            58899999999999999999999999999999987655556667889999999999999999999999999999999999


Q ss_pred             CCC-CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        200 AHM-SLSNLLEQR----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       200 ~~g-sL~~~l~~~----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      +++ +|.+++...    ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+..........
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            985 899999874    679999999999999999999999999999999999999999999999999997765443233


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhch
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ....|++.|+|||.+.+..++.++|+||+|+++++|++|..||...+.......+... ...+|..++..+.+++.+||.
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4457899999999998888999999999999999999999999888877776665544 334566889999999999999


Q ss_pred             hCcCCCCCHHHHhcCccc
Q psy18060        354 KDASQRLSWPELLHHPLV  371 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~  371 (549)
                      .+|.+|||+.++++||||
T Consensus       241 ~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         241 KDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999997


No 210
>KOG4721|consensus
Probab=100.00  E-value=3.2e-43  Score=364.34  Aligned_cols=240  Identities=28%  Similarity=0.495  Sum_probs=214.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++...-++.||+|+.|.||.|+..  ++.||||.+...         -+.+|+-|++|+||||+.|.++|...-.++|||
T Consensus       123 Fe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiM  191 (904)
T KOG4721|consen  123 FEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIM  191 (904)
T ss_pred             HHHhhhhhhhccCcccceeeeecc--CceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence            444556788999999999999887  789999987532         235788899999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      |||. |.|..+|+..+.++......|..+|+.|++|||.+.|||||||.-||||+.+..|||+|||.++.+... ...-+
T Consensus       192 EfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMS  270 (904)
T KOG4721|consen  192 EFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMS  270 (904)
T ss_pred             eccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhh
Confidence            9998 789999999999999999999999999999999999999999999999999999999999999877543 34467


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHhchh
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      ++||..|||||++.+.+.+.|+|||||||+|||||||..||...+...++--+-..  .++.|..+|+.++-||++||..
T Consensus       271 FaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~s  350 (904)
T KOG4721|consen  271 FAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNS  350 (904)
T ss_pred             hhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999988777666544333  3456789999999999999999


Q ss_pred             CcCCCCCHHHHhcCc
Q psy18060        355 DASQRLSWPELLHHP  369 (549)
Q Consensus       355 dP~~Rps~~elL~Hp  369 (549)
                      .|.+||++.+||.|=
T Consensus       351 KpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  351 KPRNRPSFRQILLHL  365 (904)
T ss_pred             CCCCCccHHHHHHHH
Confidence            999999999999993


No 211
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00  E-value=1.1e-40  Score=329.01  Aligned_cols=252  Identities=35%  Similarity=0.624  Sum_probs=222.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~iV~  197 (549)
                      +|...+.||+|++|.||+|.+..++..+++|++..........+.+.+|+.++++++||||+++++.+...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            47888999999999999999999999999999977655456678889999999999999999999999888  8899999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--ML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~  274 (549)
                      |+++ ++|.+++.+...+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.+........  ..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            9995 68999999888999999999999999999999999999999999999999999999999999987765432  13


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHh--cCCCCCCccCCHHHHHHHHHh
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLK--TQDVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~--~~~~~~p~~~s~~~~dlI~~~  351 (549)
                      ....++..|+|||.+.+..++.++||||||+++++|++|..||.... .......+.  .....+|..+++.+++||.+|
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  240 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKC  240 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHh
Confidence            44578999999999988889999999999999999999999998765 333333333  233456778899999999999


Q ss_pred             chhCcCCCCCHHHHhcCccc
Q psy18060        352 LEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~  371 (549)
                      |+.+|.+||++.++++||||
T Consensus       241 l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         241 LRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999997


No 212
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00  E-value=7.1e-41  Score=342.83  Aligned_cols=254  Identities=32%  Similarity=0.506  Sum_probs=218.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ...|+..+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            356999999999999999999999999999999986543 2334456788999999999999999999999999999999


Q ss_pred             EecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||+.|+|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++......    .
T Consensus        94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----~  169 (307)
T cd06607          94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----N  169 (307)
T ss_pred             HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC----C
Confidence            99999998888764 457899999999999999999999999999999999999999999999999998765432    3


Q ss_pred             ccCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCC-CccCCHHHHHHHHH
Q psy18060        276 SIKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTF-PSQVSETYKDLVKG  350 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~-p~~~s~~~~dlI~~  350 (549)
                      ...|++.|+|||++.   ...++.++||||||+++|+|++|+.||...+.......+.... ... +..+++.+.++|.+
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  249 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDS  249 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHH
Confidence            456889999999874   4568899999999999999999999998887766655544332 222 24578899999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccCccc
Q psy18060        351 LLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ||..+|.+||++.+++.||||....
T Consensus       250 ~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         250 CLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HhcCChhhCcCHHHHhcChhhcccC
Confidence            9999999999999999999997543


No 213
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00  E-value=6.2e-41  Score=335.68  Aligned_cols=249  Identities=30%  Similarity=0.519  Sum_probs=208.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      ......||+|+||.||+|.+..++..+|+|.+....  ......+.+|+.+++.++||||+++++++...+..++++||+
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            334468999999999999999999999999886542  334567889999999999999999999999999999999998


Q ss_pred             C-CCHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeecccceecccCccccc
Q psy18060        201 H-MSLSNLLEQR-KKL--SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       201 ~-gsL~~~l~~~-~~l--~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      . ++|.+++... ..+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++...........
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  167 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE  167 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence            7 5899999764 445  88889999999999999999999999999999999976 67999999999876643333334


Q ss_pred             ccCCCCcccccccccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHH--HhcCCCCCCccCCHHHHHHHHH
Q psy18060        276 SIKGTPLYMAPELIAER--PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHL-IRL--LKTQDVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~--~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~-~~~--i~~~~~~~p~~~s~~~~dlI~~  350 (549)
                      ...|++.|+|||++.+.  .++.++|+||||+++|+|++|+.||........ ...  .......+|..+++++++|+.+
T Consensus       168 ~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  247 (268)
T cd06624         168 TFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILR  247 (268)
T ss_pred             cCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHH
Confidence            45689999999998654  378999999999999999999999976532211 111  1223345677889999999999


Q ss_pred             hchhCcCCCCCHHHHhcCccc
Q psy18060        351 LLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ||+.+|.+|||+.|++.||||
T Consensus       248 ~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         248 CFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HcCCCchhCCCHHHHHhCCCC
Confidence            999999999999999999997


No 214
>KOG0983|consensus
Probab=100.00  E-value=1.8e-42  Score=332.47  Aligned_cols=258  Identities=27%  Similarity=0.498  Sum_probs=216.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~i  195 (549)
                      .+++.+.+..||.|+.|+||+++.+.+|...|||.+.+... .++.+.++..+.++..- .+|.||+++++|-.+..++|
T Consensus        90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence            34556778889999999999999999999999999987654 44556677777765554 59999999999999988999


Q ss_pred             EEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        196 ITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       196 V~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      .||.+..-+..+++. .++++|..+-.+...++.||.||.. +||||||+||+|||+|..|.+||||||++.++... ..
T Consensus       169 cMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-kA  247 (391)
T KOG0983|consen  169 CMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-KA  247 (391)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecc-cc
Confidence            999988666666655 3579999999999999999999975 59999999999999999999999999999877654 33


Q ss_pred             ccccCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCC-CCCCc--cCCHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQD-VTFPS--QVSETYKD  346 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~~~~-~~~p~--~~s~~~~d  346 (549)
                      .+...|-+.|||||.+.   ..+|+..+||||||++++||.||+.||.+.+ .-+.+.++.+.. +.+|.  .+|+.+++
T Consensus       248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~  327 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQS  327 (391)
T ss_pred             cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHH
Confidence            45567999999999984   4579999999999999999999999999853 345555555433 33342  48999999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        347 LVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      |+..||++|+.+||...++|+|||+.....
T Consensus       328 fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  328 FVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             HHHHHhhcCcccCcchHHHhcCcceeecch
Confidence            999999999999999999999999986543


No 215
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00  E-value=3.2e-41  Score=350.18  Aligned_cols=258  Identities=30%  Similarity=0.481  Sum_probs=211.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC-----CE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL-----NE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~-----~~  192 (549)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|.+..... ......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence            3679999999999999999999999999999999864322 23345677899999999999999999876443     35


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        193 FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      .++++||++++|.+.+. ...+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus        83 ~~lv~e~~~~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~  161 (336)
T cd07849          83 VYIVQELMETDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD  161 (336)
T ss_pred             EEEEehhcccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence            89999999999988875 45799999999999999999999999999999999999999999999999999876543211


Q ss_pred             ---cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------
Q psy18060        273 ---MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT-----------------  331 (549)
Q Consensus       273 ---~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~-----------------  331 (549)
                         ......||+.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+..                 
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (336)
T cd07849         162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLR  241 (336)
T ss_pred             ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchh
Confidence               1234578999999998754 5689999999999999999999999987654333222110                 


Q ss_pred             -------CC--CC-----CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        332 -------QD--VT-----FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       332 -------~~--~~-----~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                             .+  ..     ..+..++++.++|.+||+.+|.+|||+.|+++||||......
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence                   00  00     113467889999999999999999999999999999876543


No 216
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00  E-value=2.3e-41  Score=336.00  Aligned_cols=248  Identities=33%  Similarity=0.559  Sum_probs=219.9

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||.|+||.||++.+..+++.+|+|.+..... .......+.+|+++++.+.||||+++++.+...+..|++||++. ++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999999999999999865432 23445678899999999999999999999999999999999997 589


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--------cccc
Q psy18060        205 SNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--------MLTS  276 (549)
Q Consensus       205 ~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--------~~~~  276 (549)
                      .+++.+.+.+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++........        ....
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            99999878899999999999999999999999999999999999999999999999999875433211        2234


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccC--CHHHHHHHHHhchh
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQV--SETYKDLVKGLLEK  354 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~--s~~~~dlI~~~L~~  354 (549)
                      ..+++.|+|||...+..++.++||||||+++|+|++|..||...........+..+...+|...  ++.+.+++.+||+.
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  240 (265)
T cd05579         161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVP  240 (265)
T ss_pred             cccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcC
Confidence            5688899999999888899999999999999999999999999888888888877766666655  99999999999999


Q ss_pred             CcCCCCCH---HHHhcCcccCcc
Q psy18060        355 DASQRLSW---PELLHHPLVKDN  374 (549)
Q Consensus       355 dP~~Rps~---~elL~Hpw~~~~  374 (549)
                      +|.+|||+   .++++||||++.
T Consensus       241 ~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         241 DPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             CHhhcCCCccHHHHhcCccccCC
Confidence            99999999   999999999754


No 217
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00  E-value=5.3e-41  Score=336.62  Aligned_cols=252  Identities=27%  Similarity=0.508  Sum_probs=212.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC--------hHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS--------GKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      +|.+.+.||+|+||.||+|.+..+++.+|+|.+......        ....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            478889999999999999999999999999988643211        112356788999999999999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ..++||||+. ++|.+++.+...+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            9999999997 589999998888999999999999999999999999999999999999999999999999998765322


Q ss_pred             c--ccccccCCCCcccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCC----ccC
Q psy18060        271 T--HMLTSIKGTPLYMAPELIAERP--YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFP----SQV  340 (549)
Q Consensus       271 ~--~~~~~~~GT~~Y~APE~l~~~~--y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p----~~~  340 (549)
                      .  .......|+..|+|||.+....  ++.++|+||||+++|+|++|..||...+.......+...  ...+|    ..+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence            1  1123456889999999987654  889999999999999999999999766655444333222  22233    246


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +.++.++|.+||.++|.+|||+.++++||||
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            8999999999999999999999999999997


No 218
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00  E-value=1.8e-41  Score=343.16  Aligned_cols=255  Identities=29%  Similarity=0.488  Sum_probs=210.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|...+.||+|+||.||++.+..+++.+|+|.+...... .....+.+|+.++.++. ||||+++++++...+..+++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            4566778999999999999999999999999998754333 44567888999999986 999999999998888999999


Q ss_pred             ecCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        198 EFAHMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       198 E~~~gsL~~~l~-----~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ||+.++|.++..     ....+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++......
T Consensus        83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd06616          83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI  162 (288)
T ss_pred             ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence            999887666543     246799999999999999999999975 99999999999999999999999999997654322


Q ss_pred             ccccccCCCCcccccccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcC-CCCCC----ccCCH
Q psy18060        272 HMLTSIKGTPLYMAPELIAER---PYDHTADLWSLGCIAYEIHMGHPPFKTVSI-LHLIRLLKTQ-DVTFP----SQVSE  342 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~---~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~~~~~~i~~~-~~~~p----~~~s~  342 (549)
                       ......||+.|+|||++.+.   .++.++|||||||++|+|++|+.||..... ......+..+ ...++    ..+++
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd06616         163 -AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSP  241 (288)
T ss_pred             -ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCH
Confidence             22344689999999999765   689999999999999999999999976542 1222222222 12222    24789


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ++.+||.+||+++|.+|||+++++.||||....
T Consensus       242 ~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         242 SFVNFINLCLIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhhchh
Confidence            999999999999999999999999999997643


No 219
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00  E-value=1.6e-41  Score=345.78  Aligned_cols=255  Identities=31%  Similarity=0.484  Sum_probs=217.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +.|.....||+|+||.||++.+..++..||+|.+....  ......+.+|+.+++.+.||||+++++.+...+..++|||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e   99 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME   99 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence            44566778999999999999999999999999986532  3345668899999999999999999999999999999999


Q ss_pred             cCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+++ +|.+++. +..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.............
T Consensus       100 ~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  178 (292)
T cd06658         100 FLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL  178 (292)
T ss_pred             CCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence            9985 7888775 4578999999999999999999999999999999999999999999999999987654333333445


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHhchh
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---VTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      .||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+....   ...+...++.+.+++.+||..
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  258 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVR  258 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccC
Confidence            78999999999988889999999999999999999999998877766655544321   122235789999999999999


Q ss_pred             CcCCCCCHHHHhcCcccCcccc
Q psy18060        355 DASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ||.+|||++++++||||.....
T Consensus       259 ~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         259 EPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             ChhHCcCHHHHhhChhhhccCC
Confidence            9999999999999999986543


No 220
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00  E-value=1e-40  Score=338.31  Aligned_cols=253  Identities=29%  Similarity=0.493  Sum_probs=219.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      .|...+.||+|++|.||++.+..+++.+|+|.+....  ......+.+|+.+++.+.||||+++++++...+..++++||
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEec
Confidence            4555689999999999999999899999999986432  23345678999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      +. ++|.+++.. .++++..+..++.|++.||+|||++||+||||+|+||+++.++.++|+|||.+..............
T Consensus        98 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~  176 (285)
T cd06648          98 LEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV  176 (285)
T ss_pred             cCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccccc
Confidence            97 589999887 6799999999999999999999999999999999999999999999999998876543333334456


Q ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCccCCHHHHHHHHHhchhC
Q psy18060        279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---FPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       279 GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~dlI~~~L~~d  355 (549)
                      |++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+......   .+..+++.+.+||.+||+.+
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  256 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRD  256 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccC
Confidence            899999999998888999999999999999999999999888777776666554322   22347899999999999999


Q ss_pred             cCCCCCHHHHhcCcccCccc
Q psy18060        356 ASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       356 P~~Rps~~elL~Hpw~~~~~  375 (549)
                      |.+|||+.++++||||....
T Consensus       257 p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         257 PAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             hhhCcCHHHHccCcccccCC
Confidence            99999999999999997654


No 221
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=100.00  E-value=4.2e-41  Score=344.40  Aligned_cols=252  Identities=29%  Similarity=0.467  Sum_probs=206.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcC--CCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLD--LKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFV  194 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~  194 (549)
                      +|++.+.||+|+||.||+|.+..  ++..||+|.+.... ........+.+|+.+++.++||||+++++++...  +.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            48899999999999999999988  89999999987643 1122235667899999999999999999999887  8899


Q ss_pred             EEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec----CCcEEEeecccce
Q psy18060        195 LITEFAHMSLSNLLEQR-----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK----DGVAMLCDFGFAR  265 (549)
Q Consensus       195 iV~E~~~gsL~~~l~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~----~g~vKL~DFGla~  265 (549)
                      +||||++++|.+++...     ..+++..++.++.||+.||.|||++||+||||||+||+++.    +|.+||+|||+++
T Consensus        81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~  160 (316)
T cd07842          81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR  160 (316)
T ss_pred             EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence            99999999888887542     26899999999999999999999999999999999999999    8999999999997


Q ss_pred             ecccCcc---cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHH---
Q psy18060        266 SMAVGTH---MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH---------LIRLL---  329 (549)
Q Consensus       266 ~~~~~~~---~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~---------~~~~i---  329 (549)
                      .......   ......+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.....         ....+   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd07842         161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV  240 (316)
T ss_pred             ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence            6543221   1234568899999998866 458999999999999999999999997654321         00000   


Q ss_pred             -----------------------hcCCCCCC-----------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        330 -----------------------KTQDVTFP-----------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       330 -----------------------~~~~~~~p-----------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                             ......++           ...+..+.+++.+||+.||.+|||+.|++.||||
T Consensus       241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                                   00001111           1467789999999999999999999999999998


No 222
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00  E-value=2.5e-41  Score=356.87  Aligned_cols=251  Identities=25%  Similarity=0.417  Sum_probs=207.8

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCC-----CceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~-----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      ...++|++.+.||+|+||.||+|.+..+     +..||+|.+..... ......+.+|+.+++.+ .|||||++++++..
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            3456899999999999999999986544     35799999975432 33456788999999999 89999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhc---------------------------------------------------------
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQR---------------------------------------------------------  211 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~---------------------------------------------------------  211 (549)
                      .+.+++||||+. |+|.+++...                                                         
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ  193 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence            999999999998 6899988642                                                         


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cccc
Q psy18060        212 -------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTS  276 (549)
Q Consensus       212 -------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~~  276 (549)
                                   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......  ....
T Consensus       194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                         1367888999999999999999999999999999999999999999999999976543321  1122


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHhch
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..+++.|||||++.+..++.++|||||||++|+|++ |+.||...........+...  ....|...++++.+++.+||+
T Consensus       274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN  353 (374)
T ss_pred             CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence            335678999999998899999999999999999997 99999876554433333222  334556679999999999999


Q ss_pred             hCcCCCCCHHHHhc
Q psy18060        354 KDASQRLSWPELLH  367 (549)
Q Consensus       354 ~dP~~Rps~~elL~  367 (549)
                      .||.+|||+.++++
T Consensus       354 ~dp~~RPs~~~l~~  367 (374)
T cd05106         354 LEPTERPTFSQISQ  367 (374)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999865


No 223
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00  E-value=4.9e-41  Score=350.14  Aligned_cols=255  Identities=28%  Similarity=0.457  Sum_probs=213.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----  191 (549)
                      ..++|++++.||+|+||.||+|.+..++..||+|.+............+.+|+.+++.++||||+++++++....     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            356799999999999999999999999999999998654433444456789999999999999999999886543     


Q ss_pred             -EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        192 -EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       192 -~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                       .+++|||+++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  171 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE  171 (343)
T ss_pred             ceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence             4689999998889888764 57999999999999999999999999999999999999999999999999999765432


Q ss_pred             cccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---------------  334 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---------------  334 (549)
                         .....+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+.......+.....               
T Consensus       172 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07880         172 ---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA  248 (343)
T ss_pred             ---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence               234568999999999876 4588999999999999999999999987765443333221100               


Q ss_pred             ----------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        335 ----------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       335 ----------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                                      .+.+.+++.+.++|.+||..||.+|||+.+++.||||+...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence                            01235788899999999999999999999999999998653


No 224
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00  E-value=5.8e-41  Score=334.12  Aligned_cols=247  Identities=28%  Similarity=0.468  Sum_probs=210.3

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCC-hHHHHHHHHHHHH-HHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEI-QKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|.+..+++.+|+|.+.+.... ......+..|..+ .....|||++++++++...+.+|++|||++ 
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5689999999999999999999999998754321 2222334445444 445689999999999999999999999997 


Q ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        202 MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       202 gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                      ++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||+++....    .....|++
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~  157 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTP  157 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCCc
Confidence            58999999888899999999999999999999999999999999999999999999999999875432    23446889


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHHHHHHhchhCcC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP----SQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dlI~~~L~~dP~  357 (549)
                      .|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.......+    ..+++.+.++|.+||+.+|.
T Consensus       158 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             CccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHH
Confidence            99999999888899999999999999999999999998888777776655543333    35789999999999999999


Q ss_pred             CCCCH---HHHhcCcccCccc
Q psy18060        358 QRLSW---PELLHHPLVKDNL  375 (549)
Q Consensus       358 ~Rps~---~elL~Hpw~~~~~  375 (549)
                      +|||+   +|++.||||++..
T Consensus       238 ~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         238 KRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             HccCCCcHHHHHcChHhhcCC
Confidence            99955   7999999997643


No 225
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00  E-value=6.5e-41  Score=336.68  Aligned_cols=244  Identities=30%  Similarity=0.498  Sum_probs=204.1

Q ss_pred             cceeEEEEE--ecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEE
Q psy18060        119 EKYQKICLI--GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       119 ~~y~~~~~i--G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ++|.+.+.+  |+|+||.||++.++.++..+|+|.+.......       .|+.....+ +||||+++++++...+..++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i   86 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL   86 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence            456666665  99999999999999999999999986543221       122222222 79999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeecccceecccCccc
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~~~  273 (549)
                      ||||++ ++|.+++..+..+++.++..++.|++.||.|||+.|++||||||+||+++.++ .++|+|||+++.....   
T Consensus        87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~---  163 (267)
T PHA03390         87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP---  163 (267)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC---
Confidence            999997 69999999888999999999999999999999999999999999999999998 9999999998765432   


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHhcCCCCCCccCCHHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH----LIRLLKTQDVTFPSQVSETYKDLVK  349 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~----~~~~i~~~~~~~p~~~s~~~~dlI~  349 (549)
                       ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......    ............++.+++.+.+||.
T Consensus       164 -~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (267)
T PHA03390        164 -SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQ  242 (267)
T ss_pred             -ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHH
Confidence             23468999999999998889999999999999999999999997553321    1222223444566689999999999


Q ss_pred             HhchhCcCCCCC-HHHHhcCcccCc
Q psy18060        350 GLLEKDASQRLS-WPELLHHPLVKD  373 (549)
Q Consensus       350 ~~L~~dP~~Rps-~~elL~Hpw~~~  373 (549)
                      +||+.+|.+||+ ++|+|+||||+.
T Consensus       243 ~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        243 SMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHhccChhhCCchHHHHhcCCcccC
Confidence            999999999996 599999999963


No 226
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=100.00  E-value=1.1e-41  Score=342.89  Aligned_cols=253  Identities=34%  Similarity=0.550  Sum_probs=218.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      .|+..+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.+.||||+++++++...+..++||||
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            46677889999999999999999999999999865432 33456789999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      ++ ++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..............
T Consensus        84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06642          84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhccc
Confidence            98 488888764 5789999999999999999999999999999999999999999999999999976654333334456


Q ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcC
Q psy18060        279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       279 GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      |+..|+|||++.+..++.++|+|||||++|+|++|+.||...........+... ...++..++..+.++|.+||+.+|.
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  242 (277)
T cd06642         163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPR  242 (277)
T ss_pred             CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcc
Confidence            899999999999888999999999999999999999999876655554444333 2334456789999999999999999


Q ss_pred             CCCCHHHHhcCcccCcc
Q psy18060        358 QRLSWPELLHHPLVKDN  374 (549)
Q Consensus       358 ~Rps~~elL~Hpw~~~~  374 (549)
                      +|||+.++++||||...
T Consensus       243 ~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         243 FRPTAKELLKHKFITRY  259 (277)
T ss_pred             cCcCHHHHHHhHHHHHH
Confidence            99999999999999754


No 227
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00  E-value=8.6e-41  Score=335.97  Aligned_cols=254  Identities=32%  Similarity=0.588  Sum_probs=217.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC---CCCeeEEEEEEeeCCEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA---HPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~~iV  196 (549)
                      .|+..+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+.+++.+.   |||++++++++......+++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            4778899999999999999999999999999986542 2334566788999999986   99999999999999999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      |||+. ++|.+++.. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++...........
T Consensus        81 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06917          81 MEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS  159 (277)
T ss_pred             EecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccc
Confidence            99997 489988865 4799999999999999999999999999999999999999999999999999987655443344


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCc-cCCHHHHHHHHHhc
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPS-QVSETYKDLVKGLL  352 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~-~~s~~~~dlI~~~L  352 (549)
                      ...|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+.... ..++. .++.++.+++.+||
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  239 (277)
T cd06917         160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACL  239 (277)
T ss_pred             cccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHc
Confidence            5579999999999865 457899999999999999999999998877766554443332 22333 37889999999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCccc
Q psy18060        353 EKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ..||.+||++.+++.||||+...
T Consensus       240 ~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         240 DEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             CCCcccCcCHHHHhhChHhhccc
Confidence            99999999999999999997643


No 228
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00  E-value=1.3e-40  Score=335.43  Aligned_cols=254  Identities=34%  Similarity=0.544  Sum_probs=220.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      -|++.+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            47788999999999999999998999999999865432 33456788999999999999999999999999999999999


Q ss_pred             CCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      +++ +|.+++.. ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++..............
T Consensus        84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06641          84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence            984 78888864 5689999999999999999999999999999999999999999999999999876654333334456


Q ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchhCcC
Q psy18060        279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       279 GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      |+..|+|||.+.+..++.++|+|||||++|+|++|..||...........+.... ..++..++.++.+++.+||+.+|.
T Consensus       163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  242 (277)
T cd06641         163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPS  242 (277)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChh
Confidence            8999999999988888999999999999999999999998877666665554432 335567899999999999999999


Q ss_pred             CCCCHHHHhcCcccCccc
Q psy18060        358 QRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       358 ~Rps~~elL~Hpw~~~~~  375 (549)
                      +||++.++++||||....
T Consensus       243 ~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         243 FRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             hCcCHHHHHhCHHHhhhh
Confidence            999999999999997643


No 229
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00  E-value=4.1e-41  Score=338.46  Aligned_cols=251  Identities=33%  Similarity=0.504  Sum_probs=215.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |++.+.||+|++|.||+|.+..+++.+|+|.+............+.+|+++++.++||||+++++.+...+..+++|||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            56788999999999999999989999999998765544344567888999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCC
Q psy18060        201 HMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       201 ~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      +++|.+.+... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||.+..............+
T Consensus        81 ~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~  160 (283)
T cd05118          81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVV  160 (283)
T ss_pred             CCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccC
Confidence            99999888764 57999999999999999999999999999999999999999999999999999877654323344568


Q ss_pred             CCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------------CC----
Q psy18060        280 TPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-------------------VT----  335 (549)
Q Consensus       280 T~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-------------------~~----  335 (549)
                      +..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+.+..+...-                   ..    
T Consensus       161 ~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05118         161 TRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK  240 (283)
T ss_pred             cccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc
Confidence            8899999998776 78999999999999999999999998877655544432110                   00    


Q ss_pred             -------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 -------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 -------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                             ..+.++.++.+||.+||++||.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                   112468899999999999999999999999999997


No 230
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00  E-value=2.5e-40  Score=330.83  Aligned_cols=252  Identities=27%  Similarity=0.510  Sum_probs=217.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC---CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG---RSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~  193 (549)
                      .+|.+.+.||+|+||.||+|.+..+++.+|+|.+....   ........+.+|+++++.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            46999999999999999999999999999999885432   2234456788999999999999999999988654  568


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC--
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--  270 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~--  270 (549)
                      +++|||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.....  
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            89999987 589999988888999999999999999999999999999999999999999999999999999765321  


Q ss_pred             -cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHH
Q psy18060        271 -THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDL  347 (549)
Q Consensus       271 -~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dl  347 (549)
                       ....+...|+..|+|||++.+..++.++|+|||||++|+|++|+.||...........+...  ...+|..+++.+.++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  241 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDF  241 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHH
Confidence             11123456899999999998888999999999999999999999999887666655555433  234678899999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCccc
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      |.+||+ +|..|||+.+++.|||.
T Consensus       242 i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHhc-CcccCccHHHHhcCCCC
Confidence            999999 57999999999999985


No 231
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=6.2e-41  Score=339.04  Aligned_cols=254  Identities=28%  Similarity=0.456  Sum_probs=216.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++++.||+|+||.||++.+..+++.+|+|++.... .......+.+|+++++.++||||+++++.+...+.+++||
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            467899999999999999999999999999999986543 2334567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      ||++ ++|.+++.+.+.+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||++......  ...
T Consensus        83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--~~~  160 (284)
T cd06620          83 EFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--IAD  160 (284)
T ss_pred             ecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--ccC
Confidence            9998 5899999888889999999999999999999997 59999999999999999999999999998655322  123


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHhcC-CCCCCc-cCCH
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL-----------HLIRLLKTQ-DVTFPS-QVSE  342 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~-----------~~~~~i~~~-~~~~p~-~~s~  342 (549)
                      ...||..|+|||++.+..++.++|||||||++|+|++|..||......           .....+... ...++. .++.
T Consensus       161 ~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd06620         161 TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPE  240 (284)
T ss_pred             ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCH
Confidence            457899999999998888999999999999999999999999865431           222223222 223333 3788


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ++.+|+.+||+.||.+|||+.|+++||||...
T Consensus       241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            99999999999999999999999999999653


No 232
>KOG0596|consensus
Probab=100.00  E-value=6.4e-42  Score=354.96  Aligned_cols=253  Identities=29%  Similarity=0.509  Sum_probs=213.9

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..|++++.||+||.+.||++.... .+.||+|.+.....+......+.+|+..|.+| .|.+||++|++-..++.+|+||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            569999999999999999998765 56678887776677788899999999999999 5899999999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cc
Q psy18060        198 EFAHMSLSNLLEQRKKLSE-TICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--ML  274 (549)
Q Consensus       198 E~~~gsL~~~l~~~~~l~e-~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~  274 (549)
                      |+-+.+|..+|+++....+ -.++.+..|++.|+.++|.+||||.||||.|+|+- .|.+||+|||+|..+..++-  ..
T Consensus       440 E~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~k  518 (677)
T KOG0596|consen  440 ECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVK  518 (677)
T ss_pred             ecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceee
Confidence            9988899999998765433 57899999999999999999999999999999994 57999999999988875532  23


Q ss_pred             cccCCCCcccccccccCCC-----------CCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCC--CCCCccC
Q psy18060        275 TSIKGTPLYMAPELIAERP-----------YDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQD--VTFPSQV  340 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~-----------y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~~~~--~~~p~~~  340 (549)
                      .+.+||+.|||||.+....           .+.++||||||||||+|+.|++||..-. ...-+..|....  ++||..-
T Consensus       519 dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~  598 (677)
T KOG0596|consen  519 DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP  598 (677)
T ss_pred             ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC
Confidence            4568999999999985432           5578999999999999999999997643 344444555443  3566544


Q ss_pred             CHH-HHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        341 SET-YKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       341 s~~-~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      +.. +.++++.||++||++|||+.++|+|||+..
T Consensus       599 ~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  599 ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             CchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            443 999999999999999999999999999986


No 233
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00  E-value=1.2e-40  Score=331.71  Aligned_cols=241  Identities=24%  Similarity=0.433  Sum_probs=207.7

Q ss_pred             EEecCCcEEEEEEEE--cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        126 LIGEGSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~--~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      .||+|+||.||+|..  ..++..+|+|++............+.+|+.+++.+.||||+++++++. .+..++||||++ +
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999964  456789999998765555555678899999999999999999999875 456789999988 5


Q ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc---ccccCC
Q psy18060        203 SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM---LTSIKG  279 (549)
Q Consensus       203 sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~---~~~~~G  279 (549)
                      +|.+++.....+++..+..++.|++.||+|||++||+||||||.||+++.++.+||+|||+++........   .....+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW  160 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence            89999988888999999999999999999999999999999999999999999999999999876543221   122234


Q ss_pred             CCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchhCcC
Q psy18060        280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       280 T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      ++.|+|||.+....++.++|+|||||++|||++ |+.||...........+..+. ...|..++++++++|.+||+.||.
T Consensus       161 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~  240 (257)
T cd05116         161 PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVD  240 (257)
T ss_pred             CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCch
Confidence            678999999988889999999999999999998 999999888777777776543 456778999999999999999999


Q ss_pred             CCCCHHHHhc
Q psy18060        358 QRLSWPELLH  367 (549)
Q Consensus       358 ~Rps~~elL~  367 (549)
                      +||++.+|..
T Consensus       241 ~Rp~~~~i~~  250 (257)
T cd05116         241 ERPGFAVVEL  250 (257)
T ss_pred             hCcCHHHHHH
Confidence            9999988854


No 234
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00  E-value=2.3e-40  Score=330.85  Aligned_cols=250  Identities=32%  Similarity=0.512  Sum_probs=212.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...+..+++|
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57999999999999999999999999999999886533 23444567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        198 EFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ||++ ++|.+++..    ...+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            9998 589888753    34589999999999999999999999999999999999999999999999999887654333


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCCC-CC-CccCCHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS--ILHLIRLLKTQDV-TF-PSQVSETYKDLV  348 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~--~~~~~~~i~~~~~-~~-p~~~s~~~~dlI  348 (549)
                      ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||....  .......+..... +. +..++..+.++|
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  241 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELV  241 (267)
T ss_pred             HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHH
Confidence            3344578999999999988889999999999999999999999996543  3444444443321 22 235788999999


Q ss_pred             HHhchhCcCCCCCHHHHhcC
Q psy18060        349 KGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~H  368 (549)
                      .+||..+|.+|||+.++++.
T Consensus       242 ~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         242 SMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHCCCCcccCcCHHHHHHH
Confidence            99999999999999999864


No 235
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00  E-value=9.7e-41  Score=348.18  Aligned_cols=258  Identities=27%  Similarity=0.454  Sum_probs=214.0

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------  190 (549)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.++++++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   94 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence            34789999999999999999999999999999999876443333445678899999999999999999987543      


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        191 NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       191 ~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ...|+++++++++|.+++.. ..+++..++.++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++.... 
T Consensus        95 ~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~-  172 (345)
T cd07877          95 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-  172 (345)
T ss_pred             ccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc-
Confidence            34789999998899888765 4699999999999999999999999999999999999999999999999999876532 


Q ss_pred             cccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD----------------  333 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~----------------  333 (549)
                        ......||+.|+|||.+.+ ..++.++|||||||++|+|++|++||...+.......+....                
T Consensus       173 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (345)
T cd07877         173 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA  250 (345)
T ss_pred             --cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence              2234568999999999866 568899999999999999999999998766544433321110                


Q ss_pred             -------CCC--------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccchh
Q psy18060        334 -------VTF--------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSSE  378 (549)
Q Consensus       334 -------~~~--------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~  378 (549)
                             ...        ....++.+.+||.+||+.||.+|||+.+++.||||++...+.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~  310 (345)
T cd07877         251 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD  310 (345)
T ss_pred             HHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence                   001        113578899999999999999999999999999998755433


No 236
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=100.00  E-value=8e-41  Score=341.26  Aligned_cols=255  Identities=30%  Similarity=0.516  Sum_probs=209.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-------  189 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-------  189 (549)
                      .+++|.+.+.||+|+||.||+|.+..+++.+|+|.+..............+|+++++.++||||+++++.+..       
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   85 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR   85 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence            4688999999999999999999999999999999986543322223456789999999999999999987643       


Q ss_pred             -CCEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        190 -LNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       190 -~~~~~iV~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                       ...+++||||+.++|...+.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||+++..
T Consensus        86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence             235799999999988888765 457999999999999999999999999999999999999999999999999999765


Q ss_pred             ccCcc-----------cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--
Q psy18060        268 AVGTH-----------MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--  333 (549)
Q Consensus       268 ~~~~~-----------~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--  333 (549)
                      .....           ..+...||+.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+....  
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            43211           1233457889999998865 458999999999999999999999998877655544432110  


Q ss_pred             ---------------------CCCC-------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        334 ---------------------VTFP-------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       334 ---------------------~~~p-------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                           ...|       ..+++.+.+||.+||+.||.+|||+.|++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                                 0001       1345788899999999999999999999999997


No 237
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00  E-value=7e-41  Score=353.47  Aligned_cols=250  Identities=25%  Similarity=0.433  Sum_probs=206.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEE-----cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCC
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIH-----LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLN  191 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~-----~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~  191 (549)
                      .++|++.+.||+|+||.||+|.+     ..++..||+|++..... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~  112 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG  112 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence            35799999999999999999974     34567899999865432 23446788999999999 8999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcC----------------------------------------------------------
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRK----------------------------------------------------------  212 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~----------------------------------------------------------  212 (549)
                      ..++||||+. |+|.+++....                                                          
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            9999999998 68999886532                                                          


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc--
Q psy18060        213 -----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--  273 (549)
Q Consensus       213 -----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~--  273 (549)
                                       .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........  
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence                             3678889999999999999999999999999999999999999999999999866433211  


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHhcC-CCCCCccCCHHHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSIL-HLIRLLKTQ-DVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~-~~~~~i~~~-~~~~p~~~s~~~~dlI~~  350 (549)
                      .....++..|+|||++.+..++.++|||||||++|+|++ |..||...... .....+..+ ....|...+.++.++|.+
T Consensus       273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  352 (375)
T cd05104         273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKS  352 (375)
T ss_pred             cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHH
Confidence            122345677999999999999999999999999999998 89999876543 333333333 223456678999999999


Q ss_pred             hchhCcCCCCCHHHHhcC
Q psy18060        351 LLEKDASQRLSWPELLHH  368 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~H  368 (549)
                      ||+.||.+|||+.|+++.
T Consensus       353 cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         353 CWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HccCChhHCcCHHHHHHH
Confidence            999999999999999864


No 238
>KOG0584|consensus
Probab=100.00  E-value=4.8e-42  Score=361.90  Aligned_cols=249  Identities=26%  Similarity=0.433  Sum_probs=218.4

Q ss_pred             eEEEEEecCCcEEEEEEEEcCCCceEEEEEEecC--CCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE--EEEEE
Q psy18060        122 QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKS--GRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE--FVLIT  197 (549)
Q Consensus       122 ~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~--~~iV~  197 (549)
                      +...+||+|+|-+||+|.+..+|-.||.-.++..  ..++...+.+..|+.+|+.|+||||+++|.+|.+.+.  +.+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            3457899999999999999999999998665433  3456667899999999999999999999999977654  88999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CCccccccCCcEEEecC-CcEEEeecccceecccCccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN--RVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~--gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~~~~~~  273 (549)
                      |++. |+|+.++++.++++...++.|++||+.||.|||++  .|||||||..||||+.+ |.|||+|+|+|+.+....  
T Consensus       123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~--  200 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH--  200 (632)
T ss_pred             ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence            9987 89999999999999999999999999999999998  59999999999999876 899999999998776442  


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCC--CCccCCHHHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV-SILHLIRLLKTQDVT--FPSQVSETYKDLVKG  350 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-~~~~~~~~i~~~~~~--~p~~~s~~~~dlI~~  350 (549)
                      .....|||.|||||++. ..|+..+||||||+++.||.|+.+||... ++.++++++..+..+  +...-.+++++||.+
T Consensus       201 aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIek  279 (632)
T KOG0584|consen  201 AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEK  279 (632)
T ss_pred             cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHH
Confidence            34578999999999998 67999999999999999999999999886 567777887776432  334457899999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccCcc
Q psy18060        351 LLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ||.. ...|||+.|+|.||||...
T Consensus       280 Cl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  280 CLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HhcC-chhccCHHHHhhChhhccc
Confidence            9999 8899999999999999875


No 239
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00  E-value=1.7e-40  Score=328.74  Aligned_cols=243  Identities=25%  Similarity=0.438  Sum_probs=214.8

Q ss_pred             EEEecCCcEEEEEEEEcCC---CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        125 CLIGEGSFGKVFKAIHLDL---KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~---~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      +.||+|+||.||+|.....   +..+|+|.+....... ....+.+|+.+++.+.||||+++++++.....++++|||+.
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence            4689999999999999866   8899999987654333 46788999999999999999999999999999999999995


Q ss_pred             -CCHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        202 -MSLSNLLEQR---------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       202 -gsL~~~l~~~---------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                       ++|.+++...         ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||.+.......
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  159 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD  159 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccccc
Confidence             7999999885         779999999999999999999999999999999999999999999999999998765432


Q ss_pred             --ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHH
Q psy18060        272 --HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDL  347 (549)
Q Consensus       272 --~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl  347 (549)
                        .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+..+ ....|..+|+++.++
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd00192         160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYEL  239 (262)
T ss_pred             ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHH
Confidence              22344567899999999988889999999999999999999 69999998888877777643 345677889999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcC
Q psy18060        348 VKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~H  368 (549)
                      +.+||..+|.+|||+.+++++
T Consensus       240 i~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         240 MLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHccCCcccCcCHHHHHHh
Confidence            999999999999999999875


No 240
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00  E-value=1.2e-40  Score=345.33  Aligned_cols=258  Identities=28%  Similarity=0.421  Sum_probs=214.4

Q ss_pred             ccceeE-EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHH------------HHHHHHHHHHHHhcCCCCeeEEE
Q psy18060        118 LEKYQK-ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE------------LSSLKQECEIQKHLAHPNIIKFI  184 (549)
Q Consensus       118 ~~~y~~-~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~------------~~~~~~Ei~il~~l~hpnIv~l~  184 (549)
                      .++|.. .+.||.|+||.||+|.+..+++.||+|.+.........            ...+.+|+.+++.++||||++++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   86 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV   86 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence            356654 57799999999999999999999999998654322100            12467899999999999999999


Q ss_pred             EEEeeCCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        185 ASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       185 ~~~~~~~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                      +++...+..+++||++.|+|.+++.....+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~  166 (335)
T PTZ00024         87 DVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA  166 (335)
T ss_pred             EEEecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence            99999999999999999999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             eeccc--------------CcccccccCCCCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q psy18060        265 RSMAV--------------GTHMLTSIKGTPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL  329 (549)
Q Consensus       265 ~~~~~--------------~~~~~~~~~GT~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i  329 (549)
                      +....              .....+...+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+..+....+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i  246 (335)
T PTZ00024        167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI  246 (335)
T ss_pred             eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            76541              11122334578899999998764 4789999999999999999999999888766555443


Q ss_pred             hcC---CC-------------------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        330 KTQ---DV-------------------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       330 ~~~---~~-------------------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ...   +.                         ...+..++.+.++|.+||+.+|.+|||++|++.||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            210   00                         00124578899999999999999999999999999998653


No 241
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=100.00  E-value=1.2e-40  Score=329.10  Aligned_cols=245  Identities=34%  Similarity=0.565  Sum_probs=221.2

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSL  204 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL  204 (549)
                      ||+|+||.||++.+..+++.+|+|.+.+... .......+..|+.+++.+.||||+++++.+...+..+++||++. ++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6999999999999998899999999876543 22345678899999999999999999999999999999999995 799


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCccc
Q psy18060        205 SNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYM  284 (549)
Q Consensus       205 ~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~  284 (549)
                      .+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..............|+..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence            99999888899999999999999999999999999999999999999999999999999977654333345567899999


Q ss_pred             ccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCH--
Q psy18060        285 APELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW--  362 (549)
Q Consensus       285 APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~--  362 (549)
                      |||...+...+.++|+||||+++|+|++|..||...+.......+......+|...++.+.++|.+||..||.+|||+  
T Consensus       161 ~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         161 APEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             ChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            999998888899999999999999999999999988877777777777778888899999999999999999999999  


Q ss_pred             -HHHhcCccc
Q psy18060        363 -PELLHHPLV  371 (549)
Q Consensus       363 -~elL~Hpw~  371 (549)
                       .++++||||
T Consensus       241 ~~~l~~~~~f  250 (250)
T cd05123         241 AEEIKAHPFF  250 (250)
T ss_pred             HHHHHhCCCC
Confidence             999999998


No 242
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00  E-value=6.6e-41  Score=349.03  Aligned_cols=256  Identities=28%  Similarity=0.472  Sum_probs=215.9

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE----
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE----  192 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~----  192 (549)
                      ..++|++.+.||+|++|.||+|.+..+++.||+|.+............+.+|+.+++.+.||||+++.+++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            3467999999999999999999999999999999986543333344567789999999999999999887765544    


Q ss_pred             --EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        193 --FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       193 --~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                        .++|+|+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.+|.++|+|||++......
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE  171 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence              899999999999998875 57999999999999999999999999999999999999999999999999999765432


Q ss_pred             cccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--------------
Q psy18060        271 THMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT--------------  335 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~--------------  335 (549)
                         .....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.......+......              
T Consensus       172 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07851         172 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA  248 (343)
T ss_pred             ---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence               344568999999999865 46789999999999999999999999887766555444321100              


Q ss_pred             -----------------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        336 -----------------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       336 -----------------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                                       ....+++.+.+||.+||..+|.+|||+.+|++||||.....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence                             01246889999999999999999999999999999986543


No 243
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00  E-value=1.9e-40  Score=334.02  Aligned_cols=251  Identities=32%  Similarity=0.506  Sum_probs=212.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEEEEEEe
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFVLITE  198 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~~iV~E  198 (549)
                      |++.+.||+|++|.||+|.+..+++.+|+|.+............+.+|+.+++.+.|||++++++++...  +..++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            6788999999999999999999999999999987543333445678899999999999999999999887  88999999


Q ss_pred             cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-cccc
Q psy18060        199 FAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-MLTS  276 (549)
Q Consensus       199 ~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~~~~  276 (549)
                      |++++|.+++... ..+++..++.++.||+.||+|||+.|++|+||||+||++++++.+||+|||++........ ..+.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN  160 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence            9999999998765 5799999999999999999999999999999999999999999999999999986654321 2234


Q ss_pred             cCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---------------------
Q psy18060        277 IKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---------------------  334 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---------------------  334 (549)
                      ..++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+.......+.....                     
T Consensus       161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T cd07840         161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP  240 (287)
T ss_pred             cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence            467889999998764 4688999999999999999999999988776555544332100                     


Q ss_pred             --C--------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 --T--------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 --~--------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                        .        +...+++.+.+++.+||..+|.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence              0        001138899999999999999999999999999997


No 244
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00  E-value=2.2e-40  Score=330.99  Aligned_cols=248  Identities=23%  Similarity=0.439  Sum_probs=214.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|.+.+.||+|+||.||+|....+++.+|+|.+...   ......+.+|+++++.++||||+++++++...+.++++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC---chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            35688999999999999999999999999999998643   223456889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||++ ++|.+++...  ..+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||++..........
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence            9987 6899998764  358999999999999999999999999999999999999999999999999997765432211


Q ss_pred             -cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        275 -TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       275 -~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                       ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+... ....|..+++++.++|.+|
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  241 (263)
T cd05052         162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRAC  241 (263)
T ss_pred             cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence             12234667999999998899999999999999999998 99999988887777776554 4456778999999999999


Q ss_pred             chhCcCCCCCHHHHhcC
Q psy18060        352 LEKDASQRLSWPELLHH  368 (549)
Q Consensus       352 L~~dP~~Rps~~elL~H  368 (549)
                      |+.+|.+|||+.++++.
T Consensus       242 l~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         242 WQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             ccCCcccCCCHHHHHHH
Confidence            99999999999998653


No 245
>KOG4279|consensus
Probab=100.00  E-value=3.1e-42  Score=363.11  Aligned_cols=248  Identities=31%  Similarity=0.578  Sum_probs=217.7

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CC
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MS  203 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gs  203 (549)
                      -+||+|.||+||.|++..|....|||.+..  .+....+.+..|+.+.+.|+|.|||++.|++..++.+-|.||-.+ |+
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpe--kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPE--KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccc--ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            369999999999999999999999999854  334556788999999999999999999999999999999999876 69


Q ss_pred             HHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeecccceecccCcccccccCC
Q psy18060        204 LSNLLEQR-KKL--SETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       204 L~~~l~~~-~~l--~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      |.++|+.. +++  +|..+..+.+||++||.|||++.|||||||-.|+|++. .|.+||.|||.+++...-+....++.|
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            99999864 666  88899999999999999999999999999999999975 699999999999988766566678899


Q ss_pred             CCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHH-HhcCCCCCCccCCHHHHHHHHHhchh
Q psy18060        280 TPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVS--ILHLIRL-LKTQDVTFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       280 T~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~--~~~~~~~-i~~~~~~~p~~~s~~~~dlI~~~L~~  354 (549)
                      |..|||||++..  ..|+.++|||||||++.||.||++||....  ....++. +-...+++|..+|.+++.||.+|+.+
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence            999999999954  569999999999999999999999997543  2222221 23345678899999999999999999


Q ss_pred             CcCCCCCHHHHhcCcccCcc
Q psy18060        355 DASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ||.+||+|.++|..||++..
T Consensus       819 d~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  819 DPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             CcccCccHHHhccCcccccC
Confidence            99999999999999999876


No 246
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00  E-value=1.4e-40  Score=334.78  Aligned_cols=249  Identities=25%  Similarity=0.407  Sum_probs=214.0

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      .++|.+.+.||+|+||.||+|.+..     ++..+|+|.+..... ......+.+|+++++.+.||||+++++++.....
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            4568899999999999999998753     357899999865432 3345688999999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEE
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK--------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~--------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      .+++|||+. ++|.+++...+              .+++..+..++.||+.||.|||++|++||||||+||+++.++.+|
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k  162 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK  162 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence            999999987 58999997642              478899999999999999999999999999999999999999999


Q ss_pred             EeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC
Q psy18060        258 LCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDV  334 (549)
Q Consensus       258 L~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~  334 (549)
                      |+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+..+..
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~  242 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL  242 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc
Confidence            999999976432211  1123346788999999999999999999999999999998 9999998888888887776654


Q ss_pred             C-CCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        335 T-FPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       335 ~-~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      . .|..++..+.+++.+||+.||.+|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         243 LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            3 45678999999999999999999999999975


No 247
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00  E-value=2e-40  Score=334.06  Aligned_cols=250  Identities=32%  Similarity=0.511  Sum_probs=210.0

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc---CCCCeeEEEEEEeeCCE-----
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL---AHPNIIKFIASHETLNE-----  192 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l---~hpnIv~l~~~~~~~~~-----  192 (549)
                      |++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.+   .||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            6789999999999999999998899999999975443333334566777777665   69999999999987776     


Q ss_pred             EEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        193 FVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      ++++||+++++|.+++....  .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~  160 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE  160 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence            99999999999999887753  5899999999999999999999999999999999999999999999999999776543


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-----CC----------
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD-----VT----------  335 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~-----~~----------  335 (549)
                      . ......+++.|+|||++.+..++.++|+|||||++|+|++|.+||...+..+....+....     ..          
T Consensus       161 ~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07838         161 M-ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRS  239 (287)
T ss_pred             c-ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchh
Confidence            2 2233458899999999998889999999999999999999999998877666555443210     00          


Q ss_pred             -C-----------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 -F-----------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 -~-----------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                       +           .+.+++.+.++|.+||+.||.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         240 SFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence             0           01356788999999999999999999999999997


No 248
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=4.6e-41  Score=367.71  Aligned_cols=261  Identities=23%  Similarity=0.318  Sum_probs=200.6

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCc-eEEEEEE--------------ec-CCCChHHHHHHHHHHHHHHhcCCCC
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKK-TVALKII--------------SK-SGRSGKELSSLKQECEIQKHLAHPN  179 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~-~vAvK~i--------------~~-~~~~~~~~~~~~~Ei~il~~l~hpn  179 (549)
                      ...++|++++.||+|+||.||+|..+.... ..+.|.+              .+ ..........+.+|+.+++.++|||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            345789999999999999999987654322 2222211              11 0112223456789999999999999


Q ss_pred             eeEEEEEEeeCCEEEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC
Q psy18060        180 IIKFIASHETLNEFVLITEFAHMSLSNLLEQR-----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG  254 (549)
Q Consensus       180 Iv~l~~~~~~~~~~~iV~E~~~gsL~~~l~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g  254 (549)
                      ||++++++...+..|++++++.++|..++...     .......++.++.||+.||.|||++||+||||||+|||++.+|
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999999988877542     2345667889999999999999999999999999999999999


Q ss_pred             cEEEeecccceecccCcc-cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCC-CCCC--CH-HHHHHHH
Q psy18060        255 VAMLCDFGFARSMAVGTH-MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPP-FKTV--SI-LHLIRLL  329 (549)
Q Consensus       255 ~vKL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~P-f~~~--~~-~~~~~~i  329 (549)
                      .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|..| |...  .. ....+.+
T Consensus       305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~  384 (501)
T PHA03210        305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII  384 (501)
T ss_pred             CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence            999999999987654322 22346799999999999999999999999999999999998754 4322  12 2222211


Q ss_pred             hc---CCCCCC----------------------------ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        330 KT---QDVTFP----------------------------SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       330 ~~---~~~~~p----------------------------~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      ..   ....+|                            ..++..+.++|.+||+.||.+|||+.|+|.||||.....
T Consensus       385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence            10   000111                            135667888999999999999999999999999987543


No 249
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00  E-value=2.5e-40  Score=327.54  Aligned_cols=250  Identities=30%  Similarity=0.529  Sum_probs=221.9

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+............+.+|+++++.++||||+++++++......++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            48899999999999999999999999999999977655555566778899999999999999999999888999999999


Q ss_pred             CC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        200 AH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       200 ~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ++ ++|.+++.+    ...+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||++......  ..
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~~  158 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MA  158 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--Cc
Confidence            87 589998876    356899999999999999999999999999999999999999999999999999776543  22


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhch
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L~  353 (549)
                      ....|++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+..... ..+..++.++.+++.+||.
T Consensus       159 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08530         159 KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQ  238 (256)
T ss_pred             ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcC
Confidence            335689999999999999999999999999999999999999998887776666655443 3556789999999999999


Q ss_pred             hCcCCCCCHHHHhcCccc
Q psy18060        354 KDASQRLSWPELLHHPLV  371 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~  371 (549)
                      .+|.+|||+.++++||++
T Consensus       239 ~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         239 VKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999975


No 250
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00  E-value=1.5e-40  Score=338.35  Aligned_cols=255  Identities=31%  Similarity=0.441  Sum_probs=212.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----  191 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+++++.++||||+++++++....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            457899999999999999999999999999999999765433333456778999999999999999999886554     


Q ss_pred             -----EEEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccce
Q psy18060        192 -----EFVLITEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR  265 (549)
Q Consensus       192 -----~~~iV~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~  265 (549)
                           .+++++||++++|...+... ..+++..+..++.||+.||.|||+.||+||||||+||++++++.+||+|||++.
T Consensus        85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~  164 (302)
T cd07864          85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR  164 (302)
T ss_pred             cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence                 78999999999888887764 469999999999999999999999999999999999999999999999999997


Q ss_pred             ecccCcc-cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---CC------
Q psy18060        266 SMAVGTH-MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---DV------  334 (549)
Q Consensus       266 ~~~~~~~-~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---~~------  334 (549)
                      ....... ......+++.|+|||++.+ ..++.++|||||||++++|++|++||...+.......+...   +.      
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD  244 (302)
T ss_pred             cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence            6644322 2223356888999998864 45789999999999999999999999877665544443221   00      


Q ss_pred             ---------------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        335 ---------------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       335 ---------------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                                           .....++..+.++|.+||..+|.+|||+.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                 0112468899999999999999999999999999997


No 251
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00  E-value=7.2e-41  Score=341.72  Aligned_cols=253  Identities=30%  Similarity=0.515  Sum_probs=217.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ..|.....||+|+||.||++.+..+++.||+|.+.....  .....+.+|+.+++.+.||||+++++.+...+..+++||
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e   98 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME   98 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence            345556689999999999999998999999999865332  234567889999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |++ ++|.+++.. ..+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.............
T Consensus        99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  177 (297)
T cd06659          99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  177 (297)
T ss_pred             cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccce
Confidence            998 478887654 578999999999999999999999999999999999999999999999999987654433333456


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---CCCccCCHHHHHHHHHhchh
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV---TFPSQVSETYKDLVKGLLEK  354 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~dlI~~~L~~  354 (549)
                      .|++.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+.....   ..+..+++.+.++|.+||+.
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~  257 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTR  257 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcC
Confidence            799999999999988899999999999999999999999988777666666544332   22346789999999999999


Q ss_pred             CcCCCCCHHHHhcCcccCcc
Q psy18060        355 DASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +|.+||++.++++||||.+.
T Consensus       258 ~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         258 EPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             CcccCcCHHHHhhChhhccC
Confidence            99999999999999999754


No 252
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00  E-value=4.7e-40  Score=333.47  Aligned_cols=257  Identities=20%  Similarity=0.365  Sum_probs=214.9

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      ..++|++.+.||+|+||.||+|..+.     .+..||+|.+..... ......+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            35689999999999999999997653     345799998764432 233446788999999999999999999999889


Q ss_pred             EEEEEEecCC-CCHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEee
Q psy18060        192 EFVLITEFAH-MSLSNLLEQR----------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCD  260 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~----------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~D  260 (549)
                      ..++||||+. |+|.+++...          ..++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D  162 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD  162 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence            9999999987 6999999753          2346678889999999999999999999999999999999999999999


Q ss_pred             cccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCC
Q psy18060        261 FGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTF  336 (549)
Q Consensus       261 FGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~  336 (549)
                      ||+++........  .....++..|+|||.+.++.++.++|||||||++|||++ |..||.+.+..+....+..+. ...
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd05061         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ  242 (288)
T ss_pred             CCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9998765332111  122345678999999998889999999999999999998 899999888877777665443 345


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhc------CcccCcc
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLH------HPLVKDN  374 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~------Hpw~~~~  374 (549)
                      |...++.+.+++.+||+.||.+|||+.++++      ||||.+.
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         243 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            6678899999999999999999999999986      9998753


No 253
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00  E-value=4.1e-40  Score=327.53  Aligned_cols=246  Identities=24%  Similarity=0.414  Sum_probs=211.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||++..+. +..+|+|.+......   ...+.+|+.+++.++||||+++++++...+..+++|
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence            3568999999999999999998764 567999987644322   346788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-c
Q psy18060        198 EFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-L  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-~  274 (549)
                      ||+. |+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||.++........ .
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence            9997 6899998754 46899999999999999999999999999999999999999999999999998765432211 1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+....+..+. ...|...+..+.+++.+||
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~  238 (256)
T cd05114         159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCW  238 (256)
T ss_pred             CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHc
Confidence            22345668999999988889999999999999999999 999999988888877776653 3346668899999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      +.+|.+|||+.++++
T Consensus       239 ~~~p~~Rps~~~l~~  253 (256)
T cd05114         239 HEKPEGRPTFAELLR  253 (256)
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999999975


No 254
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=100.00  E-value=2.5e-40  Score=328.05  Aligned_cols=242  Identities=24%  Similarity=0.387  Sum_probs=205.8

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CC
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MS  203 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gs  203 (549)
                      +.||+|+||.||+|.+..+++.+|+|.+... ........+.+|+++++.+.||||+++++++...+..++||||+. ++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            3689999999999999999999999987643 334445678899999999999999999999999999999999987 58


Q ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc--cccCCC
Q psy18060        204 LSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGT  280 (549)
Q Consensus       204 L~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~--~~~~GT  280 (549)
                      |.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++..........  ....++
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  159 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP  159 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence            999997644 58999999999999999999999999999999999999999999999999987654321111  111234


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCC
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQ  358 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~  358 (549)
                      ..|+|||.+.++.++.++|||||||++|+|++ |..||...+.......+... ....|..++..+.+++.+||+.+|.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhh
Confidence            56999999998889999999999999999997 99999887776665555443 34566778999999999999999999


Q ss_pred             CCCHHHHhc
Q psy18060        359 RLSWPELLH  367 (549)
Q Consensus       359 Rps~~elL~  367 (549)
                      |||+.++++
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999864


No 255
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00  E-value=3.2e-40  Score=332.38  Aligned_cols=251  Identities=21%  Similarity=0.363  Sum_probs=211.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      ..++|++.+.||+|+||.||+|.+..     ++..+|+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            34679999999999999999998642     35679999885432 2334456889999999999999999999999989


Q ss_pred             EEEEEEecCC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEee
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRK----------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCD  260 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~----------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~D  260 (549)
                      ..++||||+. ++|.+++.+..          .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d  162 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD  162 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence            9999999987 58999987532          357788899999999999999999999999999999999999999999


Q ss_pred             cccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCC
Q psy18060        261 FGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTF  336 (549)
Q Consensus       261 FGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~  336 (549)
                      ||+++........  .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+.... ...
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05062         163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK  242 (277)
T ss_pred             CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence            9998765432211  122345788999999998889999999999999999998 799999888877777665543 345


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      |..+++.+.+++.+||+.||.+|||+.|++++
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            67789999999999999999999999999864


No 256
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=100.00  E-value=3.3e-40  Score=334.60  Aligned_cols=247  Identities=25%  Similarity=0.420  Sum_probs=211.7

Q ss_pred             cceeEEEEEecCCcEEEEEEEEc-----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHL-----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ++|.+.+.||+|+||.||++.+.     .++..+|+|.+...  .......+.+|+.+++++.||||+++++++...+.+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            56899999999999999999853     34566899988653  234456788999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEe
Q psy18060        194 VLITEFAH-MSLSNLLEQRK-------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLC  259 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~-------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~  259 (549)
                      +++|||+. ++|.+++...+             .+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~  162 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG  162 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence            99999987 68999997543             48999999999999999999999999999999999999999999999


Q ss_pred             ecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CC
Q psy18060        260 DFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VT  335 (549)
Q Consensus       260 DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~  335 (549)
                      |||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |.+||...........+..+. ..
T Consensus       163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~  242 (288)
T cd05093         163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ  242 (288)
T ss_pred             cCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence            9999976533211  1122345778999999998889999999999999999998 999999888877777776664 34


Q ss_pred             CCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       336 ~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+..+++++.+++.+||+.||.+|||+.+++.
T Consensus       243 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         243 RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            56678999999999999999999999999843


No 257
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00  E-value=2.9e-40  Score=334.18  Aligned_cols=256  Identities=34%  Similarity=0.564  Sum_probs=223.1

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      .....|+....||+|++|.||+|.+..++..+|+|++.....   ....+.+|+.+++.++||||+++++.+...+..++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   92 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV   92 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence            455668999999999999999999998899999999975433   45677899999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        196 ITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      ++||++ ++|.+++.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.........
T Consensus        93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            999998 69999999877 8999999999999999999999999999999999999999999999999988655433333


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C--CCccCCHHHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-T--FPSQVSETYKDLVKG  350 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~--~p~~~s~~~~dlI~~  350 (549)
                      .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+..... .  .+..++..++++|.+
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  252 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNK  252 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHH
Confidence            3445688999999999888899999999999999999999999998776655555443322 1  223488999999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccCcc
Q psy18060        351 LLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ||+.+|.+|||+.+++.||||+..
T Consensus       253 ~l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         253 CLVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             HhccChhhCcCHHHHhhChHhhcc
Confidence            999999999999999999999873


No 258
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=3.3e-40  Score=333.32  Aligned_cols=250  Identities=21%  Similarity=0.384  Sum_probs=212.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEc----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHL----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      +.+|++.+.||+|+||.||+|...    .++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   82 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV   82 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence            467899999999999999999853    356789999986532 334456788999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-----------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV  255 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-----------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~  255 (549)
                      +++|||++ ++|.+++..+                 ..+++..+..++.|++.||.|||++||+||||||+|||++.++.
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc
Confidence            99999998 5899998533                 24788889999999999999999999999999999999999999


Q ss_pred             EEEeecccceecccCc--ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC
Q psy18060        256 AMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ  332 (549)
Q Consensus       256 vKL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~  332 (549)
                      +||+|||+++......  .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........+...
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  242 (283)
T cd05090         163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR  242 (283)
T ss_pred             EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            9999999997654321  11233456778999999988889999999999999999998 99999888777766666544


Q ss_pred             C-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        333 D-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       333 ~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      . ...|..+++.+.+++.+||+.||.+||++.+|+++
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         243 QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            3 34567789999999999999999999999999765


No 259
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00  E-value=1.8e-40  Score=345.55  Aligned_cols=253  Identities=32%  Similarity=0.471  Sum_probs=208.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--------
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--------  190 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--------  190 (549)
                      .+|.+.+.||.|+||.||+|.+..+++.||+|.+.....  .....+.+|+.+++.++||||+++++++...        
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            679999999999999999999999999999999865432  3446788999999999999999998765443        


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeeccc
Q psy18060        191 ------NEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGF  263 (549)
Q Consensus       191 ------~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGl  263 (549)
                            ...++||||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||+
T Consensus        83 ~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~  161 (342)
T cd07854          83 GSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGL  161 (342)
T ss_pred             ccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence                  35799999999999888864 57999999999999999999999999999999999999985 45789999999


Q ss_pred             ceecccCcc---cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------
Q psy18060        264 ARSMAVGTH---MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD------  333 (549)
Q Consensus       264 a~~~~~~~~---~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~------  333 (549)
                      ++.......   ..+...||..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+....      
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07854         162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREE  241 (342)
T ss_pred             ceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence            976542211   1123467899999998754 568899999999999999999999998776544443322110      


Q ss_pred             -------------------CC-----CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        334 -------------------VT-----FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       334 -------------------~~-----~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                         ..     +.+.++.++.+||.+||+.||.+|||+.+++.||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         242 DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence                               00     113578899999999999999999999999999999753


No 260
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00  E-value=2.7e-40  Score=342.66  Aligned_cols=255  Identities=29%  Similarity=0.478  Sum_probs=210.1

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCC--CceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee----CCE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDL--KKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET----LNE  192 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~--~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~----~~~  192 (549)
                      +|.+.+.||+|+||.||++.+..+  +..||+|.+............+.+|+.+++.+ .||||+++++.+..    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            488999999999999999999988  89999999875433333345678899999998 59999999986432    356


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        193 FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +|++|++++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~  160 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG  160 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence            78999999999999998888999999999999999999999999999999999999999999999999999976543211


Q ss_pred             ----cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC---------------
Q psy18060        273 ----MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ---------------  332 (549)
Q Consensus       273 ----~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~---------------  332 (549)
                          ......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+...               
T Consensus       161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd07857         161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSP  240 (332)
T ss_pred             cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhh
Confidence                1234578999999998765 56899999999999999999999999876544333221110               


Q ss_pred             -------------CCCC---CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        333 -------------DVTF---PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       333 -------------~~~~---p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                   ...+   .+..+..+.+|+.+||+.||.+|||+.+++.|||+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         241 KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence                         0011   12457899999999999999999999999999999644


No 261
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=100.00  E-value=7.4e-40  Score=331.91  Aligned_cols=256  Identities=30%  Similarity=0.513  Sum_probs=213.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNEFVLI  196 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~iV  196 (549)
                      ++|...+.||.|++|.||+|.+..+++.+|+|.+..... ......+.+|+++++.++||||+++++++..  .+.+++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence            368899999999999999999999999999999875433 2445678899999999999999999998754  4478999


Q ss_pred             EecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        197 TEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      |||++ ++|.+++..    ...+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  159 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL  159 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence            99997 589887653    3458999999999999999999999999999999999999999999999999987654322


Q ss_pred             ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHhcCC-CCCC------cc
Q psy18060        272 HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV-----SILHLIRLLKTQD-VTFP------SQ  339 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-----~~~~~~~~i~~~~-~~~p------~~  339 (549)
                        .....++..|+|||.+.+..++.++|||||||++|+|++|..||...     ...+....+.... ..++      ..
T Consensus       160 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd06621         160 --AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIK  237 (287)
T ss_pred             --cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCc
Confidence              22446888999999999889999999999999999999999999765     2334444443322 1121      13


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccch
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLSS  377 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~  377 (549)
                      +++.+.+||.+||..+|.+|||+.|++.||||+....+
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         238 WSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             hHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccc
Confidence            56789999999999999999999999999999765443


No 262
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=100.00  E-value=1e-40  Score=335.44  Aligned_cols=251  Identities=35%  Similarity=0.557  Sum_probs=214.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |+..+.||+|++|.||+|....+++.+|+|.+............+.+|+.+++.++||||+++++++...+..++|||++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            56778999999999999999999999999999765433334456778999999999999999999999889999999999


Q ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCC
Q psy18060        201 HMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       201 ~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      +++|.+++.+. ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||+++.............+
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV  160 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcccc
Confidence            99999999886 58999999999999999999999999999999999999999999999999999876544333344567


Q ss_pred             CCcccccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------------------CCCC----
Q psy18060        280 TPLYMAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ------------------DVTF----  336 (549)
Q Consensus       280 T~~Y~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~------------------~~~~----  336 (549)
                      +..|+|||.+.+. .++.++|||||||++|+|++|++||...+.......+...                  ...+    
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP  240 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC
Confidence            8889999998766 7899999999999999999999999887655544433210                  0001    


Q ss_pred             -------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        337 -------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       337 -------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                             .+.++..+.++|.+||..+|.+||++.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         241 PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                   12347889999999999999999999999999997


No 263
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00  E-value=1.8e-40  Score=338.01  Aligned_cols=254  Identities=31%  Similarity=0.554  Sum_probs=217.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|.+.+.||+|+||.||++....++..+|+|.+.....  .....+.+|+.+++.++||||+++++.+...+..|+|+
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence            4689999999999999999999988899999999864322  23456788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+. ++|.+++.+ ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++............
T Consensus        96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~  174 (293)
T cd06647          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  174 (293)
T ss_pred             ecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccccc
Confidence            9997 589998875 46889999999999999999999999999999999999999999999999998766544333445


Q ss_pred             cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-C--CCCCccCCHHHHHHHHHhch
Q psy18060        277 IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-D--VTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~--~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ..|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+... .  ...+..++..++++|.+||.
T Consensus       175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  254 (293)
T cd06647         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE  254 (293)
T ss_pred             ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHcc
Confidence            57899999999998888999999999999999999999999877654443332221 1  12334578899999999999


Q ss_pred             hCcCCCCCHHHHhcCcccCcc
Q psy18060        354 KDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+|.+||++.+++.||||+..
T Consensus       255 ~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         255 MDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             CChhhCcCHHHHhcCHHHhcC
Confidence            999999999999999999754


No 264
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00  E-value=2.7e-40  Score=331.15  Aligned_cols=247  Identities=24%  Similarity=0.378  Sum_probs=208.1

Q ss_pred             eEEEEEecCCcEEEEEEEEcCCCc--eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee------CCEE
Q psy18060        122 QKICLIGEGSFGKVFKAIHLDLKK--TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET------LNEF  193 (549)
Q Consensus       122 ~~~~~iG~G~fg~Vy~~~~~~~~~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~------~~~~  193 (549)
                      .+.+.||+|+||.||+|....++.  .+|+|.+............+.+|+.+++.++||||+++++.+..      ....
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            467889999999999999887765  58999987655555667788999999999999999999987632      2246


Q ss_pred             EEEEecCC-CCHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        194 VLITEFAH-MSLSNLLEQ------RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~------~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      +++|||+. |+|.+++..      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence            89999987 689888742      23488999999999999999999999999999999999999999999999999987


Q ss_pred             cccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCH
Q psy18060        267 MAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSE  342 (549)
Q Consensus       267 ~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~  342 (549)
                      .......  .....+++.|+|||.+.+..++.++|||||||++|+|++ |+.||.+.........+..+. ...++.++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLD  241 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence            6433211  122346778999999999999999999999999999999 899999888777777776654 345678899


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .+.++|.+||+.||.+|||+.+++++
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999999999764


No 265
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00  E-value=1.9e-40  Score=345.45  Aligned_cols=253  Identities=30%  Similarity=0.491  Sum_probs=210.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC------CE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL------NE  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~------~~  192 (549)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|.+.+..........+.+|+.+++.+.||||+++++++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            679999999999999999999999999999999876433333345678899999999999999999988654      34


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        193 FVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +++||||+..+|..++  ...+++..+..++.|++.||+|||++||+||||||+||+++.+|.+||+|||+++....   
T Consensus        95 ~~lv~e~~~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~---  169 (342)
T cd07879          95 FYLVMPYMQTDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA---  169 (342)
T ss_pred             EEEEecccccCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC---
Confidence            6999999988887765  34689999999999999999999999999999999999999999999999999876532   


Q ss_pred             cccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC------------------
Q psy18060        273 MLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD------------------  333 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~------------------  333 (549)
                      ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+....                  
T Consensus       170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07879         170 EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKS  249 (342)
T ss_pred             CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHH
Confidence            2234568899999999866 468999999999999999999999999877554443322210                  


Q ss_pred             -----CCC--------CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        334 -----VTF--------PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       334 -----~~~--------p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                           ...        .+..++.+.+||.+||+.||.+||++.+++.||||.....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         250 YIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence                 001        1246788999999999999999999999999999987543


No 266
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=100.00  E-value=4.6e-40  Score=330.43  Aligned_cols=249  Identities=20%  Similarity=0.378  Sum_probs=213.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCC-----ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      .++|++.+.||+|+||.||+|.....+     ..+|+|.+.... .......+.+|+.+++.+.||||+++++++.....
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            467999999999999999999876543     789999986443 23344577899999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeec
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK----------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDF  261 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~----------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DF  261 (549)
                      .++||||+. ++|.+++....          .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            999999997 69999986532          3678899999999999999999999999999999999999999999999


Q ss_pred             ccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCC
Q psy18060        262 GFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFP  337 (549)
Q Consensus       262 Gla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p  337 (549)
                      |+++.......  ......+|..|+|||.+.+..++.++|||||||++|+|++ |..||...+.....+.+... ....|
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~  243 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLP  243 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCC
Confidence            99876543221  1233457889999999988889999999999999999998 99999988888777777644 34567


Q ss_pred             ccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        338 SQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       338 ~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ..++..+.+++.+||+.+|.+|||+.+++.
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         244 ENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            788999999999999999999999999975


No 267
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00  E-value=5.8e-40  Score=328.27  Aligned_cols=250  Identities=25%  Similarity=0.399  Sum_probs=213.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCC---CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDL---KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~---~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      .++|++.+.||+|+||.||+|.+..+   ...+|+|.+.... .......+.+|+.+++.++||||+++++++...+..+
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence            35689999999999999999988654   4579999886543 3444567888999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ++|||+. ++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus        82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd05033          82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA  161 (266)
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence            9999997 5899998764 4689999999999999999999999999999999999999999999999999987642221


Q ss_pred             c--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHH
Q psy18060        273 M--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLV  348 (549)
Q Consensus       273 ~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI  348 (549)
                      .  .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||...........+... ..+.|..+++.+.+++
T Consensus       162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  241 (266)
T cd05033         162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLM  241 (266)
T ss_pred             ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            1  122345678999999998889999999999999999998 99999888877777776654 3345567899999999


Q ss_pred             HHhchhCcCCCCCHHHHhcC
Q psy18060        349 KGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~H  368 (549)
                      .+||+.+|.+||++.+++++
T Consensus       242 ~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         242 LDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999865


No 268
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00  E-value=1.2e-40  Score=345.79  Aligned_cols=257  Identities=34%  Similarity=0.520  Sum_probs=214.1

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee--CCEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET--LNEF  193 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~--~~~~  193 (549)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|.+............+.+|+.+++++ +||||+++++++..  ...+
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            45789999999999999999999998999999999865433334445677899999999 99999999998754  3468


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc--
Q psy18060        194 VLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--  271 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~--  271 (549)
                      ++||||++++|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||++.+|.+||+|||++.......  
T Consensus        85 ~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~  163 (337)
T cd07852          85 YLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN  163 (337)
T ss_pred             EEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence            999999999999998776 88999999999999999999999999999999999999999999999999997654332  


Q ss_pred             ---ccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--------------
Q psy18060        272 ---HMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD--------------  333 (549)
Q Consensus       272 ---~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~--------------  333 (549)
                         .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+....              
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (337)
T cd07852         164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSP  243 (337)
T ss_pred             ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhh
Confidence               12234568999999998754 557899999999999999999999998765544333321110              


Q ss_pred             -------------C----CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        334 -------------V----TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       334 -------------~----~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                                   .    ...+.++.++.++|.+||+.+|.+|||+.++++|||+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         244 FAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             hHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                         0    0112368899999999999999999999999999999875


No 269
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=100.00  E-value=8.8e-40  Score=321.15  Aligned_cols=248  Identities=35%  Similarity=0.613  Sum_probs=216.2

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      +|...+.||+|++|.||++.+..+++.+++|++.....  .....+.+|+.+++.++||||+++++++...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEec
Confidence            47889999999999999999998999999999876433  3456788999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        200 AH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       200 ~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      ++ ++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+........ ....
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~  157 (253)
T cd05122          79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTM  157 (253)
T ss_pred             CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccce
Confidence            98 6899998876 6899999999999999999999999999999999999999999999999999977654432 3455


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCc--cCCHHHHHHHHHhchh
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPS--QVSETYKDLVKGLLEK  354 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~--~~s~~~~dlI~~~L~~  354 (549)
                      .|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+... ....+.  .++..+.++|.+||+.
T Consensus       158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  237 (253)
T cd05122         158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQK  237 (253)
T ss_pred             ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccC
Confidence            7899999999998888999999999999999999999999887555444443322 222332  3489999999999999


Q ss_pred             CcCCCCCHHHHhcCcc
Q psy18060        355 DASQRLSWPELLHHPL  370 (549)
Q Consensus       355 dP~~Rps~~elL~Hpw  370 (549)
                      ||.+|||+.++++|||
T Consensus       238 ~p~~R~t~~~~l~~~~  253 (253)
T cd05122         238 NPEKRPTAEQLLKHPF  253 (253)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            9999999999999999


No 270
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00  E-value=4.2e-40  Score=329.37  Aligned_cols=248  Identities=23%  Similarity=0.382  Sum_probs=210.2

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCC---CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE-----
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDL---KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE-----  192 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~---~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~-----  192 (549)
                      |.+.+.||+|+||.||+|....+   +..+|+|.+............+.+|+.+++.++||||+++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            56788999999999999987653   4789999997655555566788999999999999999999998755443     


Q ss_pred             -EEEEEecCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        193 -FVLITEFAH-MSLSNLLEQR------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       193 -~~iV~E~~~-gsL~~~l~~~------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                       .+++|||+. ++|..++...      ..+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             799999987 6898888542      36899999999999999999999999999999999999999999999999999


Q ss_pred             eecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccC
Q psy18060        265 RSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQV  340 (549)
Q Consensus       265 ~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~  340 (549)
                      +........  .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+....+..+ ....|..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  240 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDC  240 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCC
Confidence            876433211  122345678999999988889999999999999999999 99999988877777766544 34567789


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ++.+.+++.+||+.||.+|||+.|++++
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999999999764


No 271
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00  E-value=8.9e-40  Score=325.92  Aligned_cols=249  Identities=34%  Similarity=0.550  Sum_probs=212.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.+..... .......+.+|++++++++||||+++++.+...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            579999999999999999999999999999999875432 3334567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        198 EFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ||++ ++|.+++..    ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            9998 589998864    34589999999999999999999999999999999999999999999999999876654433


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcCC-CCCCc-cCCHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS--ILHLIRLLKTQD-VTFPS-QVSETYKDLV  348 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~--~~~~~~~i~~~~-~~~p~-~~s~~~~dlI  348 (549)
                      ......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||....  .......+..+. .+.|. .++..+.++|
T Consensus       162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  241 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLV  241 (267)
T ss_pred             ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHH
Confidence            3345578999999999998889999999999999999999999996543  334444444332 22343 6888999999


Q ss_pred             HHhchhCcCCCCCHHHHhc
Q psy18060        349 KGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~  367 (549)
                      .+||..+|.+|||+.+|++
T Consensus       242 ~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         242 SRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHcCCCcccCCCHHHHHH
Confidence            9999999999999998864


No 272
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00  E-value=5e-40  Score=334.62  Aligned_cols=260  Identities=28%  Similarity=0.484  Sum_probs=212.7

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|.+....... ....+..|+.++... .||||+++++++......
T Consensus        11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~   89 (296)
T cd06618          11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDV   89 (296)
T ss_pred             cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-HHHHHHHHHHHHHhccCCCchHhhheeeecCCeE
Confidence            335577999999999999999999999999999999997654332 334455666666555 599999999999999999


Q ss_pred             EEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      |++|||++++|.+++.. ...+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++.......
T Consensus        90 ~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~  169 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK  169 (296)
T ss_pred             EEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence            99999999888888765 4578999999999999999999997 599999999999999999999999999987654322


Q ss_pred             ccccccCCCCcccccccccCC----CCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCC-CCCC--ccCCHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAER----PYDHTADLWSLGCIAYEIHMGHPPFKTVSI-LHLIRLLKTQD-VTFP--SQVSET  343 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~----~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~~~~~~i~~~~-~~~p--~~~s~~  343 (549)
                       ......+++.|+|||.+.+.    .++.++||||||+++|+|++|+.||..... .+....+.... ...+  ..++++
T Consensus       170 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (296)
T cd06618         170 -AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPD  248 (296)
T ss_pred             -cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence             22334588899999998654    388999999999999999999999976432 23333333322 2233  247899


Q ss_pred             HHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        344 YKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       344 ~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                      +.+|+.+||..||.+||++++++.||||.....
T Consensus       249 l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence            999999999999999999999999999986544


No 273
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00  E-value=5.9e-40  Score=330.66  Aligned_cols=250  Identities=21%  Similarity=0.360  Sum_probs=212.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      .++|.+.+.||+|++|.||+|.+..     ++..||+|.+.... .......+.+|+.+++.++||||+++++++...+.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            3669999999999999999999987     77889999886432 23344568889999999999999999999988888


Q ss_pred             EEEEEecCC-CCHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC---cEEEeec
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK-------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG---VAMLCDF  261 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~-------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g---~vKL~DF  261 (549)
                      .+++|||+. ++|.+++...+       .+++..+..++.||+.||+|||++|++||||||+||+++.++   .+||+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            999999996 68999997653       489999999999999999999999999999999999998765   5999999


Q ss_pred             ccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCC
Q psy18060        262 GFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFP  337 (549)
Q Consensus       262 Gla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p  337 (549)
                      |+++........  .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+... ....|
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~  243 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP  243 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence            999866322111  112234567999999998899999999999999999997 99999988877766665433 44567


Q ss_pred             ccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        338 SQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       338 ~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ..++..+.+++.+||+.+|.+|||+.++++|
T Consensus       244 ~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         244 KGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            7889999999999999999999999999987


No 274
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00  E-value=1.5e-39  Score=334.53  Aligned_cols=251  Identities=31%  Similarity=0.512  Sum_probs=215.3

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      |...+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.++|||++++++++.+.+..|+||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            6677889999999999999999999999999875433 333446788899999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccC
Q psy18060        200 AHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIK  278 (549)
Q Consensus       200 ~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~  278 (549)
                      +.++|.+.+.. ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....    .+...
T Consensus       103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~~~~  178 (313)
T cd06633         103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----ANSFV  178 (313)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----CCCcc
Confidence            99998888865 45689999999999999999999999999999999999999999999999998864322    23457


Q ss_pred             CCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--CCccCCHHHHHHHHHhch
Q psy18060        279 GTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT--FPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       279 GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~dlI~~~L~  353 (549)
                      |+..|+|||++.   ...++.++|||||||++|+|++|..||...+.......+.....+  ....++..+++|+.+||+
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  258 (313)
T cd06633         179 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQ  258 (313)
T ss_pred             ccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHcc
Confidence            899999999984   456889999999999999999999999887766655554433221  224578899999999999


Q ss_pred             hCcCCCCCHHHHhcCcccCccc
Q psy18060        354 KDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       354 ~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ++|.+||++.+++.||||....
T Consensus       259 ~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         259 KIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             CChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999998644


No 275
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00  E-value=6.1e-40  Score=334.33  Aligned_cols=248  Identities=24%  Similarity=0.397  Sum_probs=209.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCc--eEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKK--TVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~i  195 (549)
                      ++|++.+.||+|+||.||+|....++.  .+++|.+... ......+.+.+|+.++.++ +||||+++++++...+.+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            578999999999999999999877765  4688877532 2334456788999999999 79999999999999899999


Q ss_pred             EEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEE
Q psy18060        196 ITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAML  258 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL  258 (549)
                      +|||++ ++|.+++.+..                .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl  160 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKI  160 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEE
Confidence            999987 69999997642                4788999999999999999999999999999999999999999999


Q ss_pred             eecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCC
Q psy18060        259 CDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTF  336 (549)
Q Consensus       259 ~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~  336 (549)
                      +|||++....... ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+..+ ....
T Consensus       161 ~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~  239 (297)
T cd05089         161 ADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEK  239 (297)
T ss_pred             CCcCCCcccccee-ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            9999986432111 1111223557999999988889999999999999999997 99999988887777766554 2345


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      |..+++.+.+|+.+||+.+|.+|||++++++.
T Consensus       240 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         240 PRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            66789999999999999999999999999765


No 276
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=8e-40  Score=331.69  Aligned_cols=260  Identities=27%  Similarity=0.472  Sum_probs=219.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEc---CCCceEEEEEEecCCC--ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHL---DLKKTVALKIISKSGR--SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~--~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      +|++.+.||+|+||.||+|...   .+|..||+|++.....  .......+.+|+++++.+ +||||+.++++++....+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4789999999999999999874   4789999999875332  122345678899999999 699999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-  271 (549)
                      |+||||+. ++|.+++.....+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++...... 
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            99999998 5899999988889999999999999999999999999999999999999999999999999997654322 


Q ss_pred             ccccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHhcCCCCCCccCCHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTV----SILHLIRLLKTQDVTFPSQVSETYK  345 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~----~~~~~~~~i~~~~~~~p~~~s~~~~  345 (549)
                      .......|+..|+|||.+.+  ..++.++||||||+++|+|++|..||...    ........+......+|..+++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK  240 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHH
Confidence            12234568999999999865  35788999999999999999999999643    3344444555555667788999999


Q ss_pred             HHHHHhchhCcCCCC-----CHHHHhcCcccCcccchhh
Q psy18060        346 DLVKGLLEKDASQRL-----SWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       346 dlI~~~L~~dP~~Rp-----s~~elL~Hpw~~~~~~~~~  379 (549)
                      +++.+||+.||.+||     ++.+++.||||....+...
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~  279 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDL  279 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHH
Confidence            999999999999997     8899999999987665433


No 277
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00  E-value=3.1e-40  Score=329.83  Aligned_cols=249  Identities=32%  Similarity=0.514  Sum_probs=211.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .+|++.+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.+.||||+++++++...+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            568899999999999999999999999999998865432 3334567889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        198 EFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ||+. ++|.+++..    ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence            9998 489998864    34689999999999999999999999999999999999999999999999999876654333


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCCC-CC-CccCCHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI--LHLIRLLKTQDV-TF-PSQVSETYKDLV  348 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~--~~~~~~i~~~~~-~~-p~~~s~~~~dlI  348 (549)
                      ......|++.|+|||++.+..++.++|+||||+++|+|++|..||.+...  ......+..... +. +..+++.+++++
T Consensus       162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  241 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV  241 (267)
T ss_pred             ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHH
Confidence            33445799999999999888899999999999999999999999975533  343444433322 12 245889999999


Q ss_pred             HHhchhCcCCCCCHHHHhc
Q psy18060        349 KGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~  367 (549)
                      .+||..||.+|||+.+|++
T Consensus       242 ~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         242 NMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHhcCCCcccCCCHHHHHH
Confidence            9999999999999998764


No 278
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00  E-value=2.2e-40  Score=329.86  Aligned_cols=247  Identities=22%  Similarity=0.391  Sum_probs=215.0

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|++.+.||.|+||.||+|.+.. +..+|+|.+....  ......+.+|+.+++.++||||+++++++...+.++++|
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            3568999999999999999999988 8899999986543  223457889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||++ ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+..........
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence            9998 5999999763  468999999999999999999999999999999999999999999999999997765433333


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||++.+..++.++||||||+++|+|++ |+.||...+..+....+... ....|..+++.+.+++.+||
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  241 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECW  241 (261)
T ss_pred             cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHc
Confidence            34456778999999988889999999999999999998 89999988877777766543 34456788999999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      +.||.+|||+.++++
T Consensus       242 ~~~p~~Rpt~~~l~~  256 (261)
T cd05148         242 AAEPEDRPSFKALRE  256 (261)
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999864


No 279
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00  E-value=7.9e-40  Score=325.66  Aligned_cols=241  Identities=23%  Similarity=0.410  Sum_probs=206.1

Q ss_pred             EEEecCCcEEEEEEEEcCCC---ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        125 CLIGEGSFGKVFKAIHLDLK---KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~---~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      +.||+|+||.||+|....++   ..+|+|.+...... .....+.+|+++++.+.||||+++++++. .+..+++|||+.
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence            46999999999999876555   78999998765443 44567889999999999999999999876 456799999987


Q ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc---cc
Q psy18060        202 -MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT---SI  277 (549)
Q Consensus       202 -gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~---~~  277 (549)
                       ++|.+++.++..+++..+..++.|++.||.|||+.|++||||||+|||++.++.+||+|||+++..........   ..
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~  158 (257)
T cd05060          79 LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAG  158 (257)
T ss_pred             CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCc
Confidence             68999999888899999999999999999999999999999999999999999999999999987654332211   12


Q ss_pred             CCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhchhC
Q psy18060        278 KGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLLEKD  355 (549)
Q Consensus       278 ~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L~~d  355 (549)
                      .++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+.... ...|..+++.++++|.+||..+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         159 RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             cccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            23567999999998899999999999999999998 999999888777776665543 3456778999999999999999


Q ss_pred             cCCCCCHHHHhc
Q psy18060        356 ASQRLSWPELLH  367 (549)
Q Consensus       356 P~~Rps~~elL~  367 (549)
                      |.+||++.++++
T Consensus       239 p~~Rp~~~~l~~  250 (257)
T cd05060         239 PEDRPTFSELES  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999864


No 280
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00  E-value=1.2e-39  Score=335.55  Aligned_cols=250  Identities=32%  Similarity=0.506  Sum_probs=216.0

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .|...+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+++++.++|||++++++++...+..++|||
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            37888999999999999999999999999999875432 33445678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        199 FAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       199 ~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      |+.|+|.+.+.. ...+++.++..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.....    ....
T Consensus       106 ~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----~~~~  181 (317)
T cd06635         106 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----ANSF  181 (317)
T ss_pred             CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----cccc
Confidence            999998888765 45689999999999999999999999999999999999999999999999999865432    2345


Q ss_pred             CCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-C-CCccCCHHHHHHHHHhc
Q psy18060        278 KGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV-T-FPSQVSETYKDLVKGLL  352 (549)
Q Consensus       278 ~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~-~-~p~~~s~~~~dlI~~~L  352 (549)
                      .|++.|+|||++.   .+.++.++|||||||++|+|++|+.||...+.......+..... . .+..+++.++++|.+||
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  261 (317)
T cd06635         182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCL  261 (317)
T ss_pred             cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHc
Confidence            6899999999973   45688999999999999999999999988776666655544432 2 23467899999999999


Q ss_pred             hhCcCCCCCHHHHhcCcccCc
Q psy18060        353 EKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       353 ~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      +.+|.+||++.++++|||+..
T Consensus       262 ~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         262 QKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             cCCcccCcCHHHHHhChhhhc
Confidence            999999999999999999964


No 281
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00  E-value=1.3e-39  Score=324.76  Aligned_cols=246  Identities=22%  Similarity=0.386  Sum_probs=210.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|++|.||+|.... ++.||+|.+.....   ..+.+.+|+.++++++||||+++++++...+..+++|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            3569999999999999999998754 57899999865432   2356788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-
Q psy18060        198 EFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-  273 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-  273 (549)
                      |++. ++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++........ 
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            9995 79999997754  6899999999999999999999999999999999999999999999999999876532111 


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                      .....++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+.......+... ....+..++..+.+++.+|
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDC  240 (261)
T ss_pred             cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            111223457999999998889999999999999999999 99999988877777666544 3345567899999999999


Q ss_pred             chhCcCCCCCHHHHhc
Q psy18060        352 LEKDASQRLSWPELLH  367 (549)
Q Consensus       352 L~~dP~~Rps~~elL~  367 (549)
                      |+.+|.+||++.++++
T Consensus       241 l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         241 WKEDPDDRPTFETLQW  256 (261)
T ss_pred             hhcCcccCCCHHHHHH
Confidence            9999999999999864


No 282
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00  E-value=5.3e-40  Score=336.09  Aligned_cols=249  Identities=26%  Similarity=0.390  Sum_probs=209.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCce--EEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKT--VALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~--vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~  194 (549)
                      .++|++.+.||+|+||.||+|.++.++..  +|+|.+... ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            46799999999999999999998877765  466766432 2344456788899999999 8999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEE
Q psy18060        195 LITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      +||||+. ++|.+++....                .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~k  164 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK  164 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEE
Confidence            9999997 68999997543                478999999999999999999999999999999999999999999


Q ss_pred             EeecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCC
Q psy18060        258 LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVT  335 (549)
Q Consensus       258 L~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~  335 (549)
                      |+|||+++...... ......++..|+|||++.+..++.++|||||||++|+|+| |..||...+..+....+... ...
T Consensus       165 l~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  243 (303)
T cd05088         165 IADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  243 (303)
T ss_pred             eCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCC
Confidence            99999986432111 1122234677999999988889999999999999999998 99999888777776666544 234


Q ss_pred             CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        336 FPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       336 ~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .|..+++.+.+++.+||+.+|.+||++.+++.+
T Consensus       244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            556688999999999999999999999999887


No 283
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00  E-value=1.1e-39  Score=337.90  Aligned_cols=256  Identities=30%  Similarity=0.471  Sum_probs=212.5

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-CCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-LNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~i  195 (549)
                      ..++|++.+.||.|+||.||+|.+..+++.+|+|.+.+..........+.+|+.+++.++||||+++++++.. .+..++
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            3567999999999999999999999999999999986544333344667889999999999999999998865 567899


Q ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        196 ITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       196 V~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      +|||++++|.+++.. ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||+++.....   ..
T Consensus        88 v~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---~~  163 (328)
T cd07856          88 VTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---MT  163 (328)
T ss_pred             EeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC---cC
Confidence            999999899888764 46889999999999999999999999999999999999999999999999998754322   23


Q ss_pred             ccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-----------------------
Q psy18060        276 SIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT-----------------------  331 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~-----------------------  331 (549)
                      ...+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...........+..                       
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            4568899999999865 5689999999999999999999999987654322211110                       


Q ss_pred             -C--CCCCC-----ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        332 -Q--DVTFP-----SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       332 -~--~~~~p-----~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                       .  ....|     +.+++.+.++|.+||+.+|.+|||+++++.||||.....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence             0  00111     346889999999999999999999999999999975433


No 284
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00  E-value=4.5e-40  Score=329.12  Aligned_cols=245  Identities=32%  Similarity=0.531  Sum_probs=206.0

Q ss_pred             eEEEEEecCCcEEEEEEEEc----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        122 QKICLIGEGSFGKVFKAIHL----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       122 ~~~~~iG~G~fg~Vy~~~~~----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .+.+.||.|+||.||+|...    ..+..|+||.+.. .........+.+|++++++++||||+++++++...+..++||
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccccccccc
Confidence            46789999999999999988    4567899999954 344455788999999999999999999999999888899999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc--c
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--H  272 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~--~  272 (549)
                      ||+. |+|.++|...  ..+++..+..|+.||+.||.|||+++++||||+|+|||++.++.+||+|||++.......  .
T Consensus        81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9998 6999999987  679999999999999999999999999999999999999999999999999998763221  1


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKG  350 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~  350 (549)
                      ......+...|+|||.+.+..++.++||||||+++|||++ |+.||...+.......+..+. ...|..++..+.++|.+
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  240 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQ  240 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHH
Confidence            1233456778999999988889999999999999999999 789999998888877775543 34566789999999999


Q ss_pred             hchhCcCCCCCHHHHhc
Q psy18060        351 LLEKDASQRLSWPELLH  367 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~  367 (549)
                      ||..+|.+|||+.++++
T Consensus       241 C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  241 CWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HT-SSGGGS--HHHHHH
T ss_pred             HcCCChhhCcCHHHHHh
Confidence            99999999999999874


No 285
>KOG0614|consensus
Probab=100.00  E-value=2.6e-42  Score=354.07  Aligned_cols=270  Identities=28%  Similarity=0.458  Sum_probs=245.1

Q ss_pred             ccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC
Q psy18060        112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETL  190 (549)
Q Consensus       112 ~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~  190 (549)
                      +..+..+++.+++..||-||||.|-++........+|+|++++.. ...+..+.+..|-+||...++|.||++|-.|.+.
T Consensus       413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~  492 (732)
T KOG0614|consen  413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS  492 (732)
T ss_pred             hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc
Confidence            445667788999999999999999998877666679999998755 3445567888999999999999999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV  269 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~  269 (549)
                      ..+|+.||-|- |.|+..++.++.|.+..+++++..+++|++|||++|||.|||||+|.+++.+|.+||.|||+|+.++.
T Consensus       493 kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~  572 (732)
T KOG0614|consen  493 KYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS  572 (732)
T ss_pred             hhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence            99999999875 68999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHH
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDL  347 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dl  347 (549)
                      +.. ..++||||.|.|||++.+..++.++|.||||+++|||++|.+||.+.++..+++.|..+  .+.+|..++..+.++
T Consensus       573 g~K-TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~L  651 (732)
T KOG0614|consen  573 GRK-TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDL  651 (732)
T ss_pred             CCc-eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHH
Confidence            754 46789999999999999999999999999999999999999999999999999999876  367899999999999


Q ss_pred             HHHhchhCcCCCCC-----HHHHhcCcccCcccchhhhhc
Q psy18060        348 VKGLLEKDASQRLS-----WPELLHHPLVKDNLSSEIESQ  382 (549)
Q Consensus       348 I~~~L~~dP~~Rps-----~~elL~Hpw~~~~~~~~~~~~  382 (549)
                      |+++...+|..|+.     +.+|.+|.||.++.+..+...
T Consensus       652 ik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~  691 (732)
T KOG0614|consen  652 IKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR  691 (732)
T ss_pred             HHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence            99999999999987     789999999998877666443


No 286
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=100.00  E-value=1e-39  Score=325.32  Aligned_cols=247  Identities=20%  Similarity=0.359  Sum_probs=210.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||.+.... +..+|+|.+......   ...+.+|+.+++.++||||+++++++...+.++++|
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence            4578999999999999999997764 456999988654332   356788999999999999999999999888899999


Q ss_pred             ecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-c
Q psy18060        198 EFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-L  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-~  274 (549)
                      ||+. ++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||.++........ .
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~  158 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence            9997 5899999764 46899999999999999999999999999999999999999999999999998765433211 1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||++.+..++.++|||||||++|+|++ |..||...+.......+..... ..+...+..+.+++.+||
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  238 (256)
T cd05113         159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCW  238 (256)
T ss_pred             CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence            12235677999999988889999999999999999998 9999988877776666655433 345667899999999999


Q ss_pred             hhCcCCCCCHHHHhcC
Q psy18060        353 EKDASQRLSWPELLHH  368 (549)
Q Consensus       353 ~~dP~~Rps~~elL~H  368 (549)
                      ..+|.+|||+.+++.+
T Consensus       239 ~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         239 HEKAEERPTFQQLLSS  254 (256)
T ss_pred             CCCcccCCCHHHHHHh
Confidence            9999999999999864


No 287
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00  E-value=3.5e-40  Score=341.19  Aligned_cols=251  Identities=24%  Similarity=0.371  Sum_probs=204.7

Q ss_pred             EEEecC--CcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEG--SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G--~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      ..||+|  +||+||++.+..+|+.||+|++..........+.+.+|+.+++.++||||+++++++...+..++||||+. 
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  99999999999999999999987665555666788999999999999999999999999999999999998 


Q ss_pred             CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc------
Q psy18060        202 MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM------  273 (549)
Q Consensus       202 gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~------  273 (549)
                      ++|.+++.+.  ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++++|||.+.........      
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD  163 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence            5899998874  35899999999999999999999999999999999999999999999999865332211100      


Q ss_pred             -ccccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC----------------
Q psy18060        274 -LTSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDV----------------  334 (549)
Q Consensus       274 -~~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~----------------  334 (549)
                       .....++..|+|||++.+  ..++.++|||||||++|+|++|+.||.................                
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd08226         164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM  243 (328)
T ss_pred             ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence             011235667999999976  4578999999999999999999999987654443322211110                


Q ss_pred             -------------------------------CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        335 -------------------------------TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       335 -------------------------------~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                                                     ..+..+++.+.+||.+||+.||.+|||+.|+++||||....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence                                           01123577899999999999999999999999999997544


No 288
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=1e-39  Score=334.20  Aligned_cols=250  Identities=30%  Similarity=0.468  Sum_probs=212.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-------CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-------LKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-------~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      .++|.+.+.||+|+||.||++.+..       +...+|+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            3679999999999999999998643       23469999987542 334456788899999999 79999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK  252 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~  252 (549)
                      .+..|+||||++ |+|.+++..+.                .+++.++..++.|++.||+|||++|++||||||+|||++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  175 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  175 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence            999999999998 59999997642                4788899999999999999999999999999999999999


Q ss_pred             CCcEEEeecccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy18060        253 DGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLL  329 (549)
Q Consensus       253 ~g~vKL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i  329 (549)
                      ++.+||+|||+++........  .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~  255 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL  255 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence            999999999998765432111  112234578999999998889999999999999999998 89999988887777766


Q ss_pred             hcCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        330 KTQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       330 ~~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .... ...|..++.++.+++.+||..+|.+|||+.+++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         256 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            5554 35667889999999999999999999999999865


No 289
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00  E-value=8.6e-40  Score=325.46  Aligned_cols=246  Identities=24%  Similarity=0.399  Sum_probs=210.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|.+.+....   ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            45889999999999999999876 4678999998654332   2457789999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc-c
Q psy18060        199 FAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML-T  275 (549)
Q Consensus       199 ~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~-~  275 (549)
                      |++ ++|.+++..+ ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+||+|||+++......... .
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            997 5899999764 468999999999999999999999999999999999999999999999999987654322111 1


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhch
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~  353 (549)
                      ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+... ....|..+++++.+++.+||.
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWH  239 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence            1223457999999998889999999999999999998 89999888877777766554 345667789999999999999


Q ss_pred             hCcCCCCCHHHHhcC
Q psy18060        354 KDASQRLSWPELLHH  368 (549)
Q Consensus       354 ~dP~~Rps~~elL~H  368 (549)
                      .+|++|||+.++++.
T Consensus       240 ~~p~~Rpt~~~~l~~  254 (256)
T cd05059         240 EKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999864


No 290
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00  E-value=1.1e-39  Score=325.15  Aligned_cols=246  Identities=22%  Similarity=0.367  Sum_probs=210.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||+|... .+..+|+|.+....   .....+.+|+.+++.++||||+++++.+...+..+++|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            467999999999999999999865 46779999876432   23467889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-  273 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-  273 (549)
                      ||+. ++|.+++...  ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||+++........ 
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA  160 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence            9987 6999998753  46889999999999999999999999999999999999999999999999999876433211 


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                      .....++..|+|||++.+..++.++|||||||++|+|++ |..||...........+... ..+.+..++.++.+++.+|
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (261)
T cd05072         161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTC  240 (261)
T ss_pred             cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            123346678999999988889999999999999999998 99999988877777766544 2334456899999999999


Q ss_pred             chhCcCCCCCHHHHhc
Q psy18060        352 LEKDASQRLSWPELLH  367 (549)
Q Consensus       352 L~~dP~~Rps~~elL~  367 (549)
                      |..+|++|||++++++
T Consensus       241 l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         241 WKEKAEERPTFDYLQS  256 (261)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999998864


No 291
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=4.1e-40  Score=332.35  Aligned_cols=250  Identities=22%  Similarity=0.392  Sum_probs=213.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCC-----CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~-----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      +.+|++.+.||+|+||.||+|.+..+     ++.||+|.+.... .......+.+|+.+++.++||||+++++++.....
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~   82 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP   82 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence            45688899999999999999987543     5789999987543 23344678899999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQR----------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV  255 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~----------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~  255 (549)
                      .++++||+. ++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+|||+++++.
T Consensus        83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCc
Confidence            999999987 5899888532                34788889999999999999999999999999999999999999


Q ss_pred             EEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC
Q psy18060        256 AMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ  332 (549)
Q Consensus       256 vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~  332 (549)
                      +||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+...
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR  242 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999876543221  1233456788999999988889999999999999999998 89999988888888877766


Q ss_pred             CC-CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        333 DV-TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       333 ~~-~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .. ..|..++..+.+++.+||+.+|.+||++.+|+..
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         243 QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            53 3567899999999999999999999999999864


No 292
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00  E-value=9.5e-40  Score=336.05  Aligned_cols=249  Identities=22%  Similarity=0.391  Sum_probs=208.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCce----EEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~----vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ..+|++.+.||+|+||.||+|.+..++..    ||+|.+... ........+.+|+.+++.++||||+++++++... ..
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~   83 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   83 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence            35699999999999999999998766654    899998643 2334456788999999999999999999998765 46


Q ss_pred             EEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ++++||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            78888877 6899999874 468999999999999999999999999999999999999999999999999998765432


Q ss_pred             ccc--cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHH
Q psy18060        272 HML--TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDL  347 (549)
Q Consensus       272 ~~~--~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl  347 (549)
                      ...  ....++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+... ..+.|+.++..+.++
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  243 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence            211  22334678999999999999999999999999999997 99999988776655544433 234456788999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcC
Q psy18060        348 VKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~H  368 (549)
                      +.+||..+|.+|||+.+++.+
T Consensus       244 i~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         244 MVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999986


No 293
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00  E-value=1.7e-39  Score=327.43  Aligned_cols=248  Identities=22%  Similarity=0.378  Sum_probs=209.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCce----EEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~----vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ..+|++.+.||+|+||.||+|.+..++..    ||+|.+... ........+.+|+.+++.+.||||+++++++... ..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~   83 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV   83 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence            35789999999999999999998777764    799988643 3344456788999999999999999999988754 46


Q ss_pred             EEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ++++|+++ |+|.+++..+ +.+++..+..++.|++.||.|||++||+||||||+|||+++++.+||+|||+++......
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence            78999887 6899999764 569999999999999999999999999999999999999999999999999998765332


Q ss_pred             cc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHH
Q psy18060        272 HM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDL  347 (549)
Q Consensus       272 ~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl  347 (549)
                      ..  .....+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+... ..+.+..++..+.++
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMI  243 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHH
Confidence            21  122235678999999998899999999999999999998 99999887776666655554 234556789999999


Q ss_pred             HHHhchhCcCCCCCHHHHhc
Q psy18060        348 VKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+||..||++||++.+++.
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999984


No 294
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00  E-value=6.8e-40  Score=333.89  Aligned_cols=252  Identities=30%  Similarity=0.484  Sum_probs=215.3

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |.....||+|+||.||++....+++.+|+|.+....  ......+.+|+.+++.++||||+++++.+...+..+++|||+
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence            334467999999999999999999999999885432  234566889999999999999999999999999999999999


Q ss_pred             CC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCC
Q psy18060        201 HM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKG  279 (549)
Q Consensus       201 ~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~G  279 (549)
                      ++ +|.+++. +..+++..+..++.|++.||+|||+.|++||||+|+||+++.++.++|+|||++..............|
T Consensus       100 ~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  178 (292)
T cd06657         100 EGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG  178 (292)
T ss_pred             CCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence            85 7887764 457899999999999999999999999999999999999999999999999998765443333344568


Q ss_pred             CCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHhchhCc
Q psy18060        280 TPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD---VTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       280 T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      |+.|+|||.+.+..++.++|+||+||++|+|++|..||.+.+.......+....   ......+++.+.+++.+||+.+|
T Consensus       179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P  258 (292)
T cd06657         179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDP  258 (292)
T ss_pred             CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCc
Confidence            999999999988889999999999999999999999998877666555553322   12234678999999999999999


Q ss_pred             CCCCCHHHHhcCcccCccc
Q psy18060        357 SQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       357 ~~Rps~~elL~Hpw~~~~~  375 (549)
                      .+||++.+++.||||....
T Consensus       259 ~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         259 AQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             ccCcCHHHHhcChHHhccC
Confidence            9999999999999997654


No 295
>KOG1989|consensus
Probab=100.00  E-value=1.3e-40  Score=363.90  Aligned_cols=243  Identities=30%  Similarity=0.527  Sum_probs=208.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEE-Eee------C
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIAS-HET------L  190 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~-~~~------~  190 (549)
                      .++++.+.|.+|||+.||.|.+...|..||+|++-..  +....+.+.+|+.+|++|. |||||.+++. ...      .
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            4578999999999999999999998899999998654  6677899999999999996 9999999993 211      1


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--CccccccCCcEEEecCCcEEEeecccce
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNR--VLHRDLKPQNVLLNKDGVAMLCDFGFAR  265 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~g--IiHrDIKP~NILl~~~g~vKL~DFGla~  265 (549)
                      -.++|.||||. |+|-+++.++  ..|+|.++++|+.|+++|+.+||..+  |||||||-|||||+.+|..||||||.|+
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            35789999999 6999999854  56999999999999999999999997  9999999999999999999999999987


Q ss_pred             ecccCccc---------ccccCCCCcccccccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC
Q psy18060        266 SMAVGTHM---------LTSIKGTPLYMAPELI---AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD  333 (549)
Q Consensus       266 ~~~~~~~~---------~~~~~GT~~Y~APE~l---~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~  333 (549)
                      ........         .-....|+.|+|||++   .+.+.+.|+|||||||+||.|+..+.||......    .|..+.
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----aIlng~  270 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----AILNGN  270 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----eEEecc
Confidence            54322111         0112468999999997   5678999999999999999999999999876443    355677


Q ss_pred             CCCCc--cCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        334 VTFPS--QVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       334 ~~~p~--~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+|+  .++..+++||..||+.||.+||++.|++.
T Consensus       271 Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~  306 (738)
T KOG1989|consen  271 YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE  306 (738)
T ss_pred             ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            77775  78999999999999999999999988875


No 296
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00  E-value=1e-39  Score=331.36  Aligned_cols=249  Identities=21%  Similarity=0.346  Sum_probs=210.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCC----------------ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCee
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLK----------------KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII  181 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~----------------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv  181 (549)
                      .++|++.+.||+|+||.||+|.+..++                ..+|+|.+.... .......+.+|+++++.++||||+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence            467999999999999999999876544                457999987543 234556788999999999999999


Q ss_pred             EEEEEEeeCCEEEEEEecCC-CCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEE
Q psy18060        182 KFIASHETLNEFVLITEFAH-MSLSNLLEQRK-----------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVL  249 (549)
Q Consensus       182 ~l~~~~~~~~~~~iV~E~~~-gsL~~~l~~~~-----------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NIL  249 (549)
                      ++++++...+..+++||++. ++|.+++....           .+++..+..++.|++.||.|||+.||+||||||+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil  162 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL  162 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence            99999999899999999987 58999998765           6899999999999999999999999999999999999


Q ss_pred             EecCCcEEEeecccceecccCc--ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHH
Q psy18060        250 LNKDGVAMLCDFGFARSMAVGT--HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM--GHPPFKTVSILHL  325 (549)
Q Consensus       250 l~~~g~vKL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt--G~~Pf~~~~~~~~  325 (549)
                      ++.++.++|+|||+++......  .......+|+.|+|||++.+..++.++|||||||++|+|++  |..||...+....
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05051         163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV  242 (296)
T ss_pred             ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH
Confidence            9999999999999997654322  11233456788999999988889999999999999999998  7889988776666


Q ss_pred             HHHHhcC--------CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        326 IRLLKTQ--------DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       326 ~~~i~~~--------~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +..+...        ....|..+|+++.+++.+||+.||.+|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         243 IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            5554322        12344567899999999999999999999999954


No 297
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=100.00  E-value=1e-39  Score=331.18  Aligned_cols=251  Identities=29%  Similarity=0.492  Sum_probs=213.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCC-----CceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETL  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~-----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~  190 (549)
                      ..++|++.+.||+|+||.||++.....     ...+|+|.+.... .......+.+|+.+++.+ +||||+++++++...
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            346799999999999999999987644     3689999987543 334456788999999999 899999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR----------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD  253 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~----------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~  253 (549)
                      +.++++|||+. |+|..++..+                ..+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~  168 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED  168 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence            99999999987 6899998653                358899999999999999999999999999999999999999


Q ss_pred             CcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh
Q psy18060        254 GVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLK  330 (549)
Q Consensus       254 g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~  330 (549)
                      +.+||+|||+++.......  ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus       169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  248 (293)
T cd05053         169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK  248 (293)
T ss_pred             CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999986643221  1122335678999999988889999999999999999997 999999888877777665


Q ss_pred             cCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        331 TQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       331 ~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .+. ...|...+..+.+|+.+||..||++|||+.+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         249 EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            543 34566788999999999999999999999999875


No 298
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00  E-value=1.5e-39  Score=333.65  Aligned_cols=252  Identities=32%  Similarity=0.501  Sum_probs=215.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..|...+.||+|+||.||+|.+..+++.+|+|.+.... ........+.+|+++++.++|||++++++++...+..++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            34778899999999999999999999999999987532 23344566788999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        198 EFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       198 E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ||+.|+|.+.+.. ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......    +.
T Consensus        95 e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----~~  170 (308)
T cd06634          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NX  170 (308)
T ss_pred             EccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----cc
Confidence            9999998888764 456899999999999999999999999999999999999999999999999998765432    34


Q ss_pred             cCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--CCccCCHHHHHHHHHh
Q psy18060        277 IKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT--FPSQVSETYKDLVKGL  351 (549)
Q Consensus       277 ~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~dlI~~~  351 (549)
                      ..|++.|+|||.+.   ...++.++|||||||++|+|++|..||...+.......+......  .+..++..+.++|.+|
T Consensus       171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  250 (308)
T cd06634         171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC  250 (308)
T ss_pred             ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHH
Confidence            56899999999974   356788999999999999999999999877655554444433322  2346889999999999


Q ss_pred             chhCcCCCCCHHHHhcCcccCcc
Q psy18060        352 LEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       352 L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      |..+|.+||+++++++|||+...
T Consensus       251 l~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         251 LQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             hhCCcccCCCHHHHhhCcccccc
Confidence            99999999999999999999764


No 299
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=100.00  E-value=2.6e-39  Score=321.43  Aligned_cols=242  Identities=24%  Similarity=0.416  Sum_probs=212.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||.|+||.||+|...  ++.+|+|.+.....   ....+.+|+.+++.++||||+++++++...+..++||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence            467899999999999999999875  78999999865432   4567889999999999999999999999889999999


Q ss_pred             ecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      |+++ ++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.++......   
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---  156 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---  156 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence            9998 59999998765  69999999999999999999999999999999999999999999999999997764321   


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||++.+..++.++||||||+++|+|++ |..||...+.......+... ....|..+++.+.++|.+||
T Consensus       157 ~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  236 (256)
T cd05039         157 DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCW  236 (256)
T ss_pred             ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHh
Confidence            23345667999999988889999999999999999997 99999988877777666544 33456778999999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      ..+|.+|||+.+++.
T Consensus       237 ~~~p~~Rp~~~~l~~  251 (256)
T cd05039         237 ELDPAKRPTFKQLRE  251 (256)
T ss_pred             ccChhhCcCHHHHHH
Confidence            999999999999875


No 300
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00  E-value=1.8e-39  Score=366.93  Aligned_cols=250  Identities=26%  Similarity=0.377  Sum_probs=205.6

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      +++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++||||+++++++.+.+..+++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            4689999999999999999999999999999999875432 233456788999999999999999999999999999999


Q ss_pred             EecCC-CCHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        197 TEFAH-MSLSNLLEQR-----------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~-----------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                      |||++ ++|.+++...           ..++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence            99998 5899988642           23456678899999999999999999999999999999999999999999999


Q ss_pred             eecccCc------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Q psy18060        265 RSMAVGT------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLI  326 (549)
Q Consensus       265 ~~~~~~~------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~  326 (549)
                      +......                  ......+||+.|||||++.+..++.++|||||||++|+|+||..||...+.....
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~  240 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS  240 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence            7652110                  0112346999999999999999999999999999999999999999876544332


Q ss_pred             HHHh-cCCCCC--CccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        327 RLLK-TQDVTF--PSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       327 ~~i~-~~~~~~--p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .... ..+...  ...+|+.+.+++.+||+.||.+||+..+.+.
T Consensus       241 ~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        241 YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            2211 111111  2367899999999999999999987655543


No 301
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00  E-value=2.5e-39  Score=324.13  Aligned_cols=249  Identities=24%  Similarity=0.394  Sum_probs=211.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCc---eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..+|++.+.||+|+||.||+|.+..++.   .+|+|.+.... .......+.+|+.+++.++||||+++++++...+..+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            3578999999999999999998865543   69999886532 3444568899999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ++|||++ ++|.+++... ..+++.++..++.|++.||.|||++|++||||||+|||++.++.++|+|||++........
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            9999997 5899999765 4689999999999999999999999999999999999999999999999999987654321


Q ss_pred             cc---cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHH
Q psy18060        273 ML---TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDL  347 (549)
Q Consensus       273 ~~---~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl  347 (549)
                      ..   ....++..|+|||.+.+..++.++|+|||||++|++++ |..||......+....+... ..+.+..+++.+.++
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  241 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQL  241 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHH
Confidence            11   12233568999999998889999999999999999886 99999888777766666544 234456789999999


Q ss_pred             HHHhchhCcCCCCCHHHHhc
Q psy18060        348 VKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+||+++|.+||++.++++
T Consensus       242 i~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         242 MLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHcccCchhCCCHHHHHH
Confidence            99999999999999999864


No 302
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00  E-value=8.1e-40  Score=340.43  Aligned_cols=249  Identities=26%  Similarity=0.456  Sum_probs=204.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee-CC
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET-LN  191 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~-~~  191 (549)
                      ++|++.+.||+|+||.||+|....     +++.||+|.+.... .......+.+|+.+++.+ +||||+++++++.. ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            579999999999999999997543     45789999986533 334456778899999999 89999999998754 45


Q ss_pred             EEEEEEecCC-CCHHHHHHhc-----------------------------------------------------------
Q psy18060        192 EFVLITEFAH-MSLSNLLEQR-----------------------------------------------------------  211 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~-----------------------------------------------------------  211 (549)
                      .++++|||+. ++|.+++...                                                           
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            7899999998 5899888642                                                           


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cccccCCCCcccccc
Q psy18060        212 --KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPE  287 (549)
Q Consensus       212 --~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE  287 (549)
                        ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+.....  ......++..|+|||
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence              2578899999999999999999999999999999999999999999999999987643221  122344677899999


Q ss_pred             cccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHH-HHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHH
Q psy18060        288 LIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPE  364 (549)
Q Consensus       288 ~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~-~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~e  364 (549)
                      ++.+..++.++|||||||++|+|++ |..||.+....+. ...+..+ ....|...++++.+++.+||+.+|.+||++.|
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~e  325 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSE  325 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            9999999999999999999999998 9999987543332 2333322 23345678999999999999999999999999


Q ss_pred             HhcC
Q psy18060        365 LLHH  368 (549)
Q Consensus       365 lL~H  368 (549)
                      +++|
T Consensus       326 ll~~  329 (337)
T cd05054         326 LVEI  329 (337)
T ss_pred             HHHH
Confidence            9876


No 303
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00  E-value=2.9e-39  Score=328.24  Aligned_cols=248  Identities=26%  Similarity=0.408  Sum_probs=211.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      ..+|.+.+.||+|+||.||+|.+..     ++..+++|.+....  ......+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            3568899999999999999997543     45668999875432  3344678899999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV  255 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~  255 (549)
                      .++||||++ ++|.+++..+.                .+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence            999999987 68999997643                3889999999999999999999999999999999999999999


Q ss_pred             EEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC
Q psy18060        256 AMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ  332 (549)
Q Consensus       256 vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~  332 (549)
                      ++|+|||+++.......  ......|++.|+|||++.+..++.++|||||||++|+|++ |+.||...+.......+..+
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            99999999976543221  1233456788999999998899999999999999999998 99999888887777776665


Q ss_pred             CC-CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        333 DV-TFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       333 ~~-~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .. ..+..+|..+.+++.+||+.+|.+|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         242 RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            44 345668999999999999999999999999865


No 304
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00  E-value=3.6e-39  Score=321.47  Aligned_cols=245  Identities=22%  Similarity=0.379  Sum_probs=208.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||+|... +++.+|+|.+......   ...+.+|+.+++.++||||+++++++. .+..+++|
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence            356999999999999999999865 4778999998754432   346788999999999999999999874 45689999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-c
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-M  273 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-~  273 (549)
                      |++. ++|.+++...  ..+++.++..++.|++.||+|||+.|++||||||+||++++++.++|+|||++........ .
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence            9987 6899998753  4689999999999999999999999999999999999999999999999999976652221 1


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                      .....++..|+|||++.+..++.++|||||||++|+|++ |++||.+.+.......+... ....|...+.++.+++.+|
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (260)
T cd05067         160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLC  239 (260)
T ss_pred             ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            223346778999999998889999999999999999998 99999988877777666544 3345567889999999999


Q ss_pred             chhCcCCCCCHHHHhc
Q psy18060        352 LEKDASQRLSWPELLH  367 (549)
Q Consensus       352 L~~dP~~Rps~~elL~  367 (549)
                      |..+|++|||+++++.
T Consensus       240 l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         240 WKEKPEERPTFEYLRS  255 (260)
T ss_pred             ccCChhhCCCHHHHHH
Confidence            9999999999998864


No 305
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00  E-value=2.8e-39  Score=321.53  Aligned_cols=241  Identities=25%  Similarity=0.439  Sum_probs=207.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEE-eeCCEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASH-ETLNEFVLI  196 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-~~~~~~~iV  196 (549)
                      ..+|++.+.||+|+||.||++...  +..+|+|.+....    ....+.+|+.+++.+.|||++++++++ ...+..+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv   78 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV   78 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence            467999999999999999999765  7889999985432    245678999999999999999999875 455678999


Q ss_pred             EecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        197 TEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      |||++ ++|.+++.++.  .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......  
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  156 (256)
T cd05082          79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--  156 (256)
T ss_pred             EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence            99997 59999998654  48899999999999999999999999999999999999999999999999987654321  


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                       ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...+.......+..+ ....++.+++.+.+++.+|
T Consensus       157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (256)
T cd05082         157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence             23345678999999998889999999999999999997 99999988887777766544 3345677899999999999


Q ss_pred             chhCcCCCCCHHHHhc
Q psy18060        352 LEKDASQRLSWPELLH  367 (549)
Q Consensus       352 L~~dP~~Rps~~elL~  367 (549)
                      |..+|.+|||+.++++
T Consensus       236 l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         236 WHLDAATRPSFLQLRE  251 (256)
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999875


No 306
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00  E-value=1.2e-39  Score=324.75  Aligned_cols=251  Identities=31%  Similarity=0.552  Sum_probs=213.4

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC---CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG---RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      +|.+.+.||+|+||.||++.+..++..+++|++....   ........+..|+.+++.++||||+++++++.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            5889999999999999999998887777777765422   2222334566789999999999999999999888899999


Q ss_pred             EecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        197 TEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      |||+. ++|.+++..    ...+++..+..++.|++.||.|||++|++||||||+||+++. +.++|+|||+++......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            99998 588888753    456999999999999999999999999999999999999975 679999999997765443


Q ss_pred             ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~  350 (549)
                      .......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+..+ ....|..++.++.++|.+
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQS  239 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHH
Confidence            3344566899999999998888999999999999999999999999887776666655444 334566789999999999


Q ss_pred             hchhCcCCCCCHHHHhcCccc
Q psy18060        351 LLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      ||..+|.+||++.++++||||
T Consensus       240 ~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         240 MLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999997


No 307
>KOG4645|consensus
Probab=100.00  E-value=6.5e-42  Score=382.42  Aligned_cols=256  Identities=30%  Similarity=0.542  Sum_probs=225.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      -+|+..-.||.|.||.||.|.+..+|...|+|.+.......+....+.+|.+++..++|||+|++|++-...+..+|.||
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            45677788999999999999999999999999987655556667788999999999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc----c
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH----M  273 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~----~  273 (549)
                      ||. |+|.++++..+..+|...+.+..|++.|+.|||+.|||||||||+||||+.+|.+|++|||.|..+.+...    .
T Consensus      1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred             HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence            998 69999999888899999999999999999999999999999999999999999999999999987765431    2


Q ss_pred             ccccCCCCcccccccccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcC-CCCCCccCCHHHHHHH
Q psy18060        274 LTSIKGTPLYMAPELIAER---PYDHTADLWSLGCIAYEIHMGHPPFKTVSI-LHLIRLLKTQ-DVTFPSQVSETYKDLV  348 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~---~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~~~~~~i~~~-~~~~p~~~s~~~~dlI  348 (549)
                      .....|||.|||||++.+.   ....++|||||||++.||.||+.||...+. -++......+ .+++|..+|++.++||
T Consensus      1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFl 1474 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFL 1474 (1509)
T ss_pred             HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHH
Confidence            3456899999999999653   467889999999999999999999987653 3444444444 4568888999999999


Q ss_pred             HHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        349 KGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      .+||+.||.+|.++.|++.|.|-+..
T Consensus      1475 e~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1475 EHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             HHHHhcCchhhhHHHHHHHhhccccc
Confidence            99999999999999999999987643


No 308
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=4.1e-39  Score=331.03  Aligned_cols=250  Identities=29%  Similarity=0.469  Sum_probs=211.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-------CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-------LKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-------~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      .++|.+.+.||+|+||.||+|.+..       ....+|+|.+.... .......+.+|+++++.+ .||||+++++++..
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            3678999999999999999997642       34569999986532 344566788999999999 69999999999998


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQR----------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK  252 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~----------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~  252 (549)
                      .+.++++|||+. |+|.+++...                ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  169 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE  169 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence            889999999987 6899999764                24788899999999999999999999999999999999999


Q ss_pred             CCcEEEeecccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy18060        253 DGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLL  329 (549)
Q Consensus       253 ~g~vKL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i  329 (549)
                      ++.+||+|||+++........  .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~  249 (314)
T cd05099         170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLL  249 (314)
T ss_pred             CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999999765432111  112234567999999998889999999999999999999 99999998888877777


Q ss_pred             hcCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        330 KTQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       330 ~~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ..+. ...|..++.++.+++.+||..+|.+|||+.++++.
T Consensus       250 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         250 REGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            6553 34567789999999999999999999999998753


No 309
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00  E-value=3.2e-39  Score=327.53  Aligned_cols=247  Identities=27%  Similarity=0.431  Sum_probs=208.7

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      +|++.+.||+|+||.||+|....     ....+|+|.+.... .......+.+|+.+++.+.||||+++++.+...+..+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLL   79 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcE
Confidence            47889999999999999998753     23568888876433 3344567889999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEE
Q psy18060        195 LITEFAH-MSLSNLLEQR------------------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVL  249 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~------------------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NIL  249 (549)
                      ++|||+. ++|.+++...                        ..+++..+..++.|++.||.|||+.||+||||||+|||
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil  159 (290)
T cd05045          80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL  159 (290)
T ss_pred             EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence            9999998 6899998642                        24788899999999999999999999999999999999


Q ss_pred             EecCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy18060        250 LNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLI  326 (549)
Q Consensus       250 l~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~  326 (549)
                      +++++.+||+|||+++.......  ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+..+....
T Consensus       160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  239 (290)
T cd05045         160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF  239 (290)
T ss_pred             EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999976533221  1123346778999999988889999999999999999998 99999988888777


Q ss_pred             HHHhcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        327 RLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       327 ~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ..+... ....|..++.++.+|+.+||+.+|.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         240 NLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            766543 33456778999999999999999999999999865


No 310
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00  E-value=3.1e-39  Score=326.14  Aligned_cols=247  Identities=24%  Similarity=0.396  Sum_probs=209.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEc-----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHL-----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      .++...+.||+|+||.||++...     .++..+|+|.+...  .......+.+|+++++.+.||||+++++++...+..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL   82 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence            46788999999999999999643     34668999987643  334456789999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEE
Q psy18060        194 VLITEFAH-MSLSNLLEQRK---------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~---------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      +++|||+. ++|.+++....               .+++..+..++.||+.||+|||++|++||||||+|||+++++.+|
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEE
Confidence            99999987 68999987643               478999999999999999999999999999999999999999999


Q ss_pred             EeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-C
Q psy18060        258 LCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-D  333 (549)
Q Consensus       258 L~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~  333 (549)
                      |+|||+++.......  ......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||......+....+..+ .
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  242 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE  242 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCcc
Confidence            999999976543221  1122345788999999998889999999999999999998 99999887777766666544 3


Q ss_pred             CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        334 VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       334 ~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ...|..+++.+.++|.+||+.||.+||++.+|++
T Consensus       243 ~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         243 LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            4556778999999999999999999999999874


No 311
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00  E-value=4e-39  Score=321.12  Aligned_cols=244  Identities=23%  Similarity=0.370  Sum_probs=207.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||+|... .+..+|+|.+......   ...+.+|+.++++++|||++++++++.. +..+++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT   79 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence            457899999999999999999766 4667999998764433   2467899999999999999999998754 5578999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-  273 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-  273 (549)
                      ||+. ++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++......... 
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence            9997 5899998763  35899999999999999999999999999999999999999999999999999765432211 


Q ss_pred             ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        274 LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       274 ~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                      .....++..|+|||++.+..++.++||||||+++|+|++ |.+||.+.+..+....+... ..+.|...+..+.+++.+|
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQC  239 (260)
T ss_pred             ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            122335667999999988889999999999999999999 99999988877777766544 3445677899999999999


Q ss_pred             chhCcCCCCCHHHHh
Q psy18060        352 LEKDASQRLSWPELL  366 (549)
Q Consensus       352 L~~dP~~Rps~~elL  366 (549)
                      |.++|.+|||+.++.
T Consensus       240 l~~~p~~Rpt~~~l~  254 (260)
T cd05070         240 WKKDPEERPTFEYLQ  254 (260)
T ss_pred             cccCcccCcCHHHHH
Confidence            999999999999886


No 312
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00  E-value=2.7e-39  Score=344.09  Aligned_cols=250  Identities=25%  Similarity=0.420  Sum_probs=206.5

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCC-----CceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETL  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~-----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~  190 (549)
                      ..++|++.+.||+|+||.||+|.+...     +..||+|++.... .......+.+|+++++.+. ||||+++++++...
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            356799999999999999999987533     3469999986543 2334567899999999996 99999999999999


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc----------------------------------------------------------
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR----------------------------------------------------------  211 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~----------------------------------------------------------  211 (549)
                      +..|||||||. |+|.++|.++                                                          
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            99999999998 6899888653                                                          


Q ss_pred             --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC
Q psy18060        212 --------------------------------------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD  253 (549)
Q Consensus       212 --------------------------------------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~  253 (549)
                                                            ..+++..+..++.||+.||+|||+.||+||||||+|||++.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~  273 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG  273 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence                                                  236778889999999999999999999999999999999999


Q ss_pred             CcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHH-HHHH
Q psy18060        254 GVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHL-IRLL  329 (549)
Q Consensus       254 g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~-~~~i  329 (549)
                      +.+||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++ |..||........ ...+
T Consensus       274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~  353 (400)
T cd05105         274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKI  353 (400)
T ss_pred             CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHH
Confidence            9999999999976543221  1223356788999999998889999999999999999997 9999987644332 3333


Q ss_pred             hcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        330 KTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       330 ~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ..+ ....|..+++.+.+++.+||+.||.+|||+.++.+
T Consensus       354 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         354 KSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             hcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            333 33456678999999999999999999999988765


No 313
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=5.6e-39  Score=362.21  Aligned_cols=149  Identities=28%  Similarity=0.470  Sum_probs=136.8

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      .+++|.+++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.++..++||||+++++++...+.+|+
T Consensus         2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence            3678999999999999999999999999999999997643 234445678899999999999999999999999999999


Q ss_pred             EEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccce
Q psy18060        196 ITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR  265 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~  265 (549)
                      ||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999996 6899999888889999999999999999999999999999999999999999999999999885


No 314
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00  E-value=2e-39  Score=326.86  Aligned_cols=249  Identities=29%  Similarity=0.475  Sum_probs=208.4

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEEEec
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      |.+.+.||+|++|.||+|....+++.+|+|.+...... .......+|+..++.+. ||||+++++.+...+..++||||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            67889999999999999999999999999998654332 22234456889999998 99999999999999999999999


Q ss_pred             CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        200 AHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       200 ~~gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      ++|+|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||+++...... ..+..
T Consensus        80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~  158 (283)
T cd07830          80 MEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-PYTDY  158 (283)
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC-CcCCC
Confidence            9999999998765  78999999999999999999999999999999999999999999999999997664332 23445


Q ss_pred             CCCCccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-------------------CCC--
Q psy18060        278 KGTPLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ-------------------DVT--  335 (549)
Q Consensus       278 ~GT~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~-------------------~~~--  335 (549)
                      .|+..|+|||++. +..++.++|+||||+++++|++|++||...+.......+...                   ...  
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence            6899999999884 456889999999999999999999999877655444332210                   000  


Q ss_pred             ---------CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        336 ---------FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       336 ---------~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                               ..+..++.+.++|.+||+.+|.+|||+.|++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence                     011236889999999999999999999999999997


No 315
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00  E-value=4.8e-39  Score=321.66  Aligned_cols=245  Identities=23%  Similarity=0.374  Sum_probs=207.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||+|.+..+ ..+|+|.+......   ...+.+|+++++.++||||+++++.+.. +..++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence            45699999999999999999988765 45999998754332   2467889999999999999999998754 5579999


Q ss_pred             ecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||+. |+|.+++.+.  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||.++.........
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            9998 5999999763  358999999999999999999999999999999999999999999999999997665332211


Q ss_pred             -cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHh
Q psy18060        275 -TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGL  351 (549)
Q Consensus       275 -~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~  351 (549)
                       ....++..|+|||+..+..++.++|||||||++|+|++ |..||.+.........+... ....+..+++.+.+++.+|
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (262)
T cd05071         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC  239 (262)
T ss_pred             ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHH
Confidence             22346678999999988889999999999999999999 89999888777776666543 2344567899999999999


Q ss_pred             chhCcCCCCCHHHHhc
Q psy18060        352 LEKDASQRLSWPELLH  367 (549)
Q Consensus       352 L~~dP~~Rps~~elL~  367 (549)
                      |+++|.+||++.+++.
T Consensus       240 l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         240 WRKEPEERPTFEYLQA  255 (262)
T ss_pred             ccCCcccCCCHHHHHH
Confidence            9999999999998864


No 316
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00  E-value=4.3e-39  Score=329.37  Aligned_cols=251  Identities=25%  Similarity=0.423  Sum_probs=209.0

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEE-----cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIH-----LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~-----~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      -..++|.+.+.||+|+||.||++.+     ..++..+|+|.+.... .......+.+|+.+++++ +||||+++++++..
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  110 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTI  110 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence            3446799999999999999999975     3345679999986543 234456788999999999 79999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      .+..+++|||+. |+|.+++....  .+++.++..++.|++.||+|||++||+||||||+|||++.++.++|+|||+++.
T Consensus       111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence            999999999987 68999997643  389999999999999999999999999999999999999999999999999976


Q ss_pred             cccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCccCC
Q psy18060        267 MAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ--DVTFPSQVS  341 (549)
Q Consensus       267 ~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s  341 (549)
                      ......  ......+++.|+|||++.+..++.++||||+||++|+|++ |..||...............  ....|...+
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAP  270 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCC
Confidence            543221  1122346788999999998889999999999999999998 99999877655444333322  223455689


Q ss_pred             HHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        342 ETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       342 ~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +++.+++.+||.++|++|||+.|+++
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            99999999999999999999999975


No 317
>KOG0194|consensus
Probab=100.00  E-value=5.2e-40  Score=347.22  Aligned_cols=253  Identities=25%  Similarity=0.403  Sum_probs=217.0

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCc---e-EEEEEEecC-CCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKK---T-VALKIISKS-GRSGKELSSLKQECEIQKHLAHPNIIKFIASHE  188 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~---~-vAvK~i~~~-~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~  188 (549)
                      +.-.-++-.+.+.||+|+||.||+|..+..+.   . ||+|..... .........+.+|++++++++|||||++||+..
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV  231 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            33334455666999999999999998776432   3 899998753 356677889999999999999999999999999


Q ss_pred             eCCEEEEEEecCC-CCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        189 TLNEFVLITEFAH-MSLSNLLEQRKK-LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       189 ~~~~~~iV~E~~~-gsL~~~l~~~~~-l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      ....++||||+|. |+|.++|++.+. ++..+...++.+.+.||+|||++++|||||..+|+|++.++.+||+|||+++.
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA  311 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence            9999999999998 599999999874 99999999999999999999999999999999999999999999999999875


Q ss_pred             cccCccccc-ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCccCCH
Q psy18060        267 MAVGTHMLT-SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD--VTFPSQVSE  342 (549)
Q Consensus       267 ~~~~~~~~~-~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~  342 (549)
                      ...- .... ...-...|+|||.+....|+.++||||+||++||+++ |..||.+....++...|....  .+.|...|.
T Consensus       312 ~~~~-~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~  390 (474)
T KOG0194|consen  312 GSQY-VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPK  390 (474)
T ss_pred             Ccce-eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHH
Confidence            5311 1111 2235678999999999999999999999999999998 889999999999999884433  445667888


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ++..++.+|+..+|++|||+.++.+
T Consensus       391 ~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  391 ELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHHHhccCChhhccCHHHHHH
Confidence            9999999999999999999988754


No 318
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00  E-value=1.6e-39  Score=333.30  Aligned_cols=244  Identities=27%  Similarity=0.447  Sum_probs=198.9

Q ss_pred             CcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCHHHHHH
Q psy18060        131 SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSLSNLLE  209 (549)
Q Consensus       131 ~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~~~l~  209 (549)
                      ++|.||.+....+++.||+|++............+.+|+.+++.++||||+++++++...+..+++|||++ ++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            44555666666789999999998764555667789999999999999999999999999999999999998 68999987


Q ss_pred             hc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-------cccccCCC
Q psy18060        210 QR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-------MLTSIKGT  280 (549)
Q Consensus       210 ~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-------~~~~~~GT  280 (549)
                      ..  ..+++..+..++.|++.||+|||++||+||||||+||+++.+|.+||+|||.+........       ......++
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN  171 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence            64  4689999999999999999999999999999999999999999999999998865432211       12334578


Q ss_pred             CcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhcC-------------------------
Q psy18060        281 PLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLI-RLLKTQ-------------------------  332 (549)
Q Consensus       281 ~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~-~~i~~~-------------------------  332 (549)
                      ..|+|||++.+  ..++.++|+||+||++|+|++|+.||...+..... ..+...                         
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (314)
T cd08216         172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE  251 (314)
T ss_pred             ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccc
Confidence            88999999865  45889999999999999999999999876543332 222110                         


Q ss_pred             --------CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        333 --------DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       333 --------~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                              ....+..+++++.+|+.+||+.||.+|||+.++|+||||+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence                    000112345788999999999999999999999999999754


No 319
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00  E-value=4.6e-39  Score=321.04  Aligned_cols=240  Identities=23%  Similarity=0.423  Sum_probs=202.1

Q ss_pred             EEecCCcEEEEEEEEc--CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        126 LIGEGSFGKVFKAIHL--DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      .||+|+||.||+|.+.  .++..+|+|++... ........+.+|+.+++.++||||++++++++. ...++||||++ +
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc-cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCC
Confidence            3899999999999765  44567999998654 233445678899999999999999999998864 56899999997 5


Q ss_pred             CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc---cccC
Q psy18060        203 SLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML---TSIK  278 (549)
Q Consensus       203 sL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~---~~~~  278 (549)
                      +|.+++.. ...+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.........   +...
T Consensus        80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05115          80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGK  159 (257)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCC
Confidence            89999875 4578999999999999999999999999999999999999999999999999997654332211   1223


Q ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCc
Q psy18060        279 GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDA  356 (549)
Q Consensus       279 GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP  356 (549)
                      +++.|+|||++.+..++.++|||||||++|+|++ |..||...........+..+ ....|...++++.++|.+||..+|
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         160 WPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             CCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            4578999999988889999999999999999996 99999988877777666554 345677889999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy18060        357 SQRLSWPELLH  367 (549)
Q Consensus       357 ~~Rps~~elL~  367 (549)
                      ++||++.+|.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998864


No 320
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00  E-value=7.6e-39  Score=318.73  Aligned_cols=247  Identities=24%  Similarity=0.377  Sum_probs=211.8

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ..++|.+.+.||+|+||.||+|.... +..+|+|.+......   ...+.+|+.+++.++||||+++++++......+++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence            34679999999999999999998764 577999998754332   35678899999999999999999999988899999


Q ss_pred             EecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-
Q psy18060        197 TEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-  272 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-  272 (549)
                      ||++. ++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++....... 
T Consensus        80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            99987 58999997653  689999999999999999999999999999999999999999999999999876643211 


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~  350 (549)
                      ......++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+.......+... ....|...++++.+++.+
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (261)
T cd05034         160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQ  239 (261)
T ss_pred             hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            1122235678999999998889999999999999999998 99999988887777776554 334566789999999999


Q ss_pred             hchhCcCCCCCHHHHhc
Q psy18060        351 LLEKDASQRLSWPELLH  367 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~  367 (549)
                      ||+.+|.+||+++++++
T Consensus       240 ~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         240 CWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HcccCcccCCCHHHHHH
Confidence            99999999999998863


No 321
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00  E-value=4.1e-39  Score=326.17  Aligned_cols=260  Identities=27%  Similarity=0.471  Sum_probs=217.3

Q ss_pred             ceeEEEEEecCCcEEEEEEEEc---CCCceEEEEEEecCCCC--hHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHL---DLKKTVALKIISKSGRS--GKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~---~~~~~vAvK~i~~~~~~--~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      +|++.+.||+|++|.||++...   .++..+|+|.+.+....  ......+.+|++++..+ +||||+++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4789999999999999999854   45788999998754321  22345678899999999 699999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ++||||+. ++|.+++.....+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++.......
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            99999997 58999998888899999999999999999999999999999999999999999999999999876543321


Q ss_pred             -cccccCCCCcccccccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCCCCccCCHHHH
Q psy18060        273 -MLTSIKGTPLYMAPELIAERP--YDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVTFPSQVSETYK  345 (549)
Q Consensus       273 -~~~~~~GT~~Y~APE~l~~~~--y~~ksDIwSlGvil~eLltG~~Pf~~~~----~~~~~~~i~~~~~~~p~~~s~~~~  345 (549)
                       ......|++.|+|||.+.+..  ++.++|+||||+++|+|++|..||....    .......+.......|..+++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEAR  240 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHH
Confidence             123346899999999987654  7889999999999999999999996432    334444455555667778999999


Q ss_pred             HHHHHhchhCcCCCCC---HHHHhcCcccCcccchhh
Q psy18060        346 DLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~  379 (549)
                      ++|.+||+.||.+|||   +.++|+||||+...+..+
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~  277 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDL  277 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHH
Confidence            9999999999999998   567899999987665444


No 322
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=5.6e-39  Score=328.16  Aligned_cols=253  Identities=28%  Similarity=0.454  Sum_probs=214.3

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEc-------CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEE
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHL-------DLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIAS  186 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~-------~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~  186 (549)
                      .....+|.+.+.||+|+||.||+|...       ..+..+|+|.+... ........+.+|+.+++.+ .||||++++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            344678999999999999999999753       23457999988643 2334456788999999999 89999999999


Q ss_pred             EeeCCEEEEEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEE
Q psy18060        187 HETLNEFVLITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVL  249 (549)
Q Consensus       187 ~~~~~~~~iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NIL  249 (549)
                      +......+++|||+. |+|.+++.++.                .++...+..++.||+.||.|||++||+||||||+||+
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil  169 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL  169 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence            999999999999997 59999997642                4677889999999999999999999999999999999


Q ss_pred             EecCCcEEEeecccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy18060        250 LNKDGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLI  326 (549)
Q Consensus       250 l~~~g~vKL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~  326 (549)
                      ++.++.+||+|||+++........  .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  249 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF  249 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence            999999999999999876532211  122346778999999988889999999999999999998 89999998888888


Q ss_pred             HHHhcCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        327 RLLKTQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       327 ~~i~~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ..+.... ...|..++..+.+++.+||..+|.+|||+.|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         250 KLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            7776543 34566789999999999999999999999999875


No 323
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=100.00  E-value=9.4e-39  Score=319.61  Aligned_cols=249  Identities=24%  Similarity=0.401  Sum_probs=210.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCc---eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      .++|+..+.||+|+||.||+|....++.   .+|+|.+.... .......+.+|+++++.+.||||+++.+++...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence            3568889999999999999999876654   69999886432 3344567889999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +||||++ ++|.+++... +.+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++........
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  162 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE  162 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence            9999998 5899998764 5789999999999999999999999999999999999999999999999999976643221


Q ss_pred             cc-c--ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHH
Q psy18060        273 ML-T--SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDL  347 (549)
Q Consensus       273 ~~-~--~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dl  347 (549)
                      .. +  ...+++.|+|||++.+..++.++|||||||++|+|++ |+.||...+.......+.... .+.+...+..+.++
T Consensus       163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l  242 (268)
T cd05063         163 GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQL  242 (268)
T ss_pred             cceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence            11 1  1223457999999988889999999999999999997 999998888777777765542 23345678999999


Q ss_pred             HHHhchhCcCCCCCHHHHhc
Q psy18060        348 VKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+||+.+|.+||++.++++
T Consensus       243 i~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         243 MLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999875


No 324
>KOG0193|consensus
Probab=100.00  E-value=2.6e-40  Score=346.71  Aligned_cols=252  Identities=27%  Similarity=0.443  Sum_probs=217.0

Q ss_pred             ccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC
Q psy18060        112 EKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN  191 (549)
Q Consensus       112 ~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~  191 (549)
                      +.+.-..+...+...||+|+||+||+|.+-   ..||||++.....++...+.|++|+..+++-+|.||+-|.|++-...
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~  461 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP  461 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence            344445567788999999999999999886   46999999988888889999999999999999999999999998776


Q ss_pred             EEEEEEecCCC-CHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc-
Q psy18060        192 EFVLITEFAHM-SLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA-  268 (549)
Q Consensus       192 ~~~iV~E~~~g-sL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~-  268 (549)
                      . .||+.+|+| +|..+|... .+|.....+.|++||++|+.|||.++|||||||..|||+.+++.|||+|||++.... 
T Consensus       462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~  540 (678)
T KOG0193|consen  462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR  540 (678)
T ss_pred             e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence            6 899999998 799998754 568899999999999999999999999999999999999999999999999986432 


Q ss_pred             -cCcccccccCCCCcccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----CCcc
Q psy18060        269 -VGTHMLTSIKGTPLYMAPELIAE---RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-----FPSQ  339 (549)
Q Consensus       269 -~~~~~~~~~~GT~~Y~APE~l~~---~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-----~p~~  339 (549)
                       .+........|...|||||++.-   .+|++.+|||||||++|||+||..||......+++-.+..+...     .-.+
T Consensus       541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~  620 (678)
T KOG0193|consen  541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSN  620 (678)
T ss_pred             eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhcc
Confidence             23344556678899999999853   57999999999999999999999999977777766665555221     1245


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .++++++|+..||..+++.||.+.+||.
T Consensus       621 ~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  621 CPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             CHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            7889999999999999999999999876


No 325
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00  E-value=8.3e-39  Score=320.47  Aligned_cols=249  Identities=26%  Similarity=0.407  Sum_probs=211.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCc---eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~---~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      ..+|++.+.||+|+||.||+|....+++   .||+|.+... ........+..|+.+++.+.||||+++++++......+
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence            3568999999999999999999887665   5999998653 23445678899999999999999999999999999999


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      +||||++ ++|.+++... +.+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||++........
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            9999997 5899998764 5689999999999999999999999999999999999999999999999999876543221


Q ss_pred             c--ccc-cC--CCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHH
Q psy18060        273 M--LTS-IK--GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYK  345 (549)
Q Consensus       273 ~--~~~-~~--GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  345 (549)
                      .  ... ..  ++..|+|||++.+..++.++|||||||++|||++ |..||...+.......+... ..+.|..++..+.
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALH  241 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHH
Confidence            1  111 11  2457999999998899999999999999999886 99999988877777666433 3345567899999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhc
Q psy18060        346 DLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +++.+||..+|.+||++.+++.
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999875


No 326
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00  E-value=1.2e-38  Score=317.95  Aligned_cols=244  Identities=23%  Similarity=0.368  Sum_probs=206.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ++|++.+.||+|++|.||+|.+..+ ..+|+|.+.....   ....+.+|+++++.+.|||++++++++.. +..+++||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTE   80 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEE
Confidence            5689999999999999999987664 4699998764332   23567889999999999999999988754 56789999


Q ss_pred             cCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-c
Q psy18060        199 FAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-L  274 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-~  274 (549)
                      |+. ++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||+++........ .
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence            998 58999997643  4789999999999999999999999999999999999999999999999999766433211 1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||...+..++.++|||||||++|+|++ |..||.+....+....+... ....|...+..+.+++.+||
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  240 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCW  240 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHc
Confidence            22346778999999988889999999999999999999 99999988777777666544 23456678999999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      .+||.+||+++++++
T Consensus       241 ~~~p~~Rp~~~~i~~  255 (260)
T cd05069         241 KKDPDERPTFEYIQS  255 (260)
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999998864


No 327
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00  E-value=9.1e-39  Score=322.80  Aligned_cols=248  Identities=23%  Similarity=0.387  Sum_probs=206.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCce----EEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKT----VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~----vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ..+|++.+.||+|+||.||+|.+..++..    +++|.+... ........+..|+.+++.+.||||+++++++.. ...
T Consensus         6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~   83 (279)
T cd05111           6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL   83 (279)
T ss_pred             HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence            35788999999999999999998877764    666766432 223345677888889999999999999998754 456


Q ss_pred             EEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ++++|++. |+|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            78889876 7999999764 578999999999999999999999999999999999999999999999999998664332


Q ss_pred             c--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC-CCCccCCHHHHHH
Q psy18060        272 H--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDV-TFPSQVSETYKDL  347 (549)
Q Consensus       272 ~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dl  347 (549)
                      .  ..+...|+..|+|||++.+..++.++|||||||++|||++ |..||.+.........+..+.. ..|..++..+.++
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMV  243 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHH
Confidence            1  1233457788999999998889999999999999999998 9999998877766666655432 3345678899999


Q ss_pred             HHHhchhCcCCCCCHHHHhc
Q psy18060        348 VKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+||..||.+|||+.|+++
T Consensus       244 i~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         244 MVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999866


No 328
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00  E-value=7e-39  Score=324.43  Aligned_cols=249  Identities=24%  Similarity=0.403  Sum_probs=211.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      ..+|++.+.||+|+||.||+|.+..     ++..+|+|.+... ........+.+|+.+++.+.||||+++++++...+.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            3568999999999999999998743     5788999998643 233445678899999999999999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEE
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK----------------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVL  249 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~----------------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NIL  249 (549)
                      .+++|||++ ++|.+++....                      .+++..+..++.||+.||.|||++|++||||||+|||
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil  162 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL  162 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence            999999988 58999987532                      3788889999999999999999999999999999999


Q ss_pred             EecCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q psy18060        250 LNKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLI  326 (549)
Q Consensus       250 l~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~  326 (549)
                      ++.++.++|+|||+++.......  ......+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+....+..
T Consensus       163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~  242 (288)
T cd05050         163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI  242 (288)
T ss_pred             ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999876532211  1122345677999999988889999999999999999997 88999888888877


Q ss_pred             HHHhcCCC-CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        327 RLLKTQDV-TFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       327 ~~i~~~~~-~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ..+..+.. ..|..++.++.+|+.+||+.+|.+|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         243 YYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            77765543 346678999999999999999999999999864


No 329
>KOG0666|consensus
Probab=100.00  E-value=7.7e-41  Score=326.19  Aligned_cols=258  Identities=30%  Similarity=0.480  Sum_probs=206.6

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCc----eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-CC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKK----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-LN  191 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~  191 (549)
                      .+..|+.+..||+|.||.||+|..++++.    .+|+|.+...+.....-...-+|+.+++.++||||+.+..+|-. +.
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            35679999999999999999997766644    68999986553222222455789999999999999999998866 77


Q ss_pred             EEEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC----CcEEEeecc
Q psy18060        192 EFVLITEFAHMSLSNLLEQR-----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD----GVAMLCDFG  262 (549)
Q Consensus       192 ~~~iV~E~~~gsL~~~l~~~-----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~----g~vKL~DFG  262 (549)
                      .+++++||++.+|+.+|+-+     +.++...++.|+.||+.|+.|||++=|+||||||.|||+..+    |.|||+|||
T Consensus       102 ~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  102 KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            89999999999999999743     358999999999999999999999999999999999999887    899999999


Q ss_pred             cceecccCcccc---cccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHH
Q psy18060        263 FARSMAVGTHML---TSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSI---------LHLIRLL  329 (549)
Q Consensus       263 la~~~~~~~~~~---~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~---------~~~~~~i  329 (549)
                      +||.+...-...   ...+-|.+|+|||.+.+ ..||.++||||+|||+.||+|-++.|.+...         ...+.+|
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI  261 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI  261 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence            999876543322   34567999999999877 5699999999999999999998888865321         1112222


Q ss_pred             hc----C---CC----CCCc--------------------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        330 KT----Q---DV----TFPS--------------------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       330 ~~----~---~~----~~p~--------------------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      ..    .   ..    .+|.                          .-++.+.+|+.+||+.||.+|+|++++|+|+||.
T Consensus       262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~  341 (438)
T KOG0666|consen  262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT  341 (438)
T ss_pred             HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence            10    0   00    0110                          1245578999999999999999999999999998


Q ss_pred             cc
Q psy18060        373 DN  374 (549)
Q Consensus       373 ~~  374 (549)
                      ..
T Consensus       342 ~d  343 (438)
T KOG0666|consen  342 ED  343 (438)
T ss_pred             cC
Confidence            65


No 330
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00  E-value=1.2e-38  Score=315.59  Aligned_cols=246  Identities=24%  Similarity=0.436  Sum_probs=212.5

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCC----ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLK----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      +++.+.||.|+||.||+|.+..++    ..+|+|.+.... .......+.+|+.+++.+.||||+++++++...+..+++
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEE
Confidence            356789999999999999998766    889999986543 223567889999999999999999999999998999999


Q ss_pred             EecCC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        197 TEFAH-MSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~--l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      ||++. ++|.+++.....  +++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++........
T Consensus        80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            99997 589999986554  999999999999999999999999999999999999999999999999999776543221


Q ss_pred             cc-ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHH
Q psy18060        274 LT-SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKG  350 (549)
Q Consensus       274 ~~-~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~  350 (549)
                      .. ...+++.|+|||.+.+..++.++|||||||++++|++ |.+||...+.......+.... ...+...+.++.+++.+
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQ  239 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            11 2237789999999988889999999999999999998 899998888777777765543 34556789999999999


Q ss_pred             hchhCcCCCCCHHHHhc
Q psy18060        351 LLEKDASQRLSWPELLH  367 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~  367 (549)
                      ||..+|.+|||+.|+++
T Consensus       240 ~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      240 CWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HCcCChhhCcCHHHHHh
Confidence            99999999999999975


No 331
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00  E-value=7.8e-39  Score=317.93  Aligned_cols=241  Identities=24%  Similarity=0.413  Sum_probs=205.8

Q ss_pred             EEEecCCcEEEEEEEEcC-CCc--eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC
Q psy18060        125 CLIGEGSFGKVFKAIHLD-LKK--TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~-~~~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~  201 (549)
                      +.||+|++|.||+|.+.. .+.  .+|+|.+...... ...+.+.+|+.++++++||||+++++.+.. ...+++|||+.
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAP   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecC
Confidence            368999999999998765 333  5899998765443 556788999999999999999999999888 88999999997


Q ss_pred             -CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc---ccc
Q psy18060        202 -MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH---MLT  275 (549)
Q Consensus       202 -gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~---~~~  275 (549)
                       ++|.+++.++.  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.......   ...
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (257)
T cd05040          79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE  158 (257)
T ss_pred             CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence             69999998764  689999999999999999999999999999999999999999999999999987644221   112


Q ss_pred             ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHhc
Q psy18060        276 SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ...++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+...  ....|...|..+.+++.+||
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd05040         159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCW  238 (257)
T ss_pred             CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHC
Confidence            3457788999999998889999999999999999998 99999888777766665532  23345668899999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      +.+|.+|||+.++++
T Consensus       239 ~~~p~~Rps~~~~~~  253 (257)
T cd05040         239 AHNPADRPTFAALRE  253 (257)
T ss_pred             CCCcccCCCHHHHHH
Confidence            999999999999875


No 332
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00  E-value=8.6e-39  Score=316.50  Aligned_cols=241  Identities=25%  Similarity=0.399  Sum_probs=206.1

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CC
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MS  203 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gs  203 (549)
                      +.||+|+||.||+|.+.. ++.+|+|.+...... .....+.+|+++++++.||||+++++++...+..++|||++. ++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            368999999999999887 999999998764432 345678899999999999999999999999999999999987 58


Q ss_pred             HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc--cccCCC
Q psy18060        204 LSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML--TSIKGT  280 (549)
Q Consensus       204 L~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~--~~~~GT  280 (549)
                      |.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+++.........  ....++
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            9999866 3568999999999999999999999999999999999999999999999999987654222111  112345


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCC
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQ  358 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~  358 (549)
                      ..|+|||.+.++.++.++|+|||||++|+|++ |..||...........+... ....|...+.++.+++.+||..+|.+
T Consensus       159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhh
Confidence            67999999988889999999999999999999 89999888776666666543 33456678999999999999999999


Q ss_pred             CCCHHHHhc
Q psy18060        359 RLSWPELLH  367 (549)
Q Consensus       359 Rps~~elL~  367 (549)
                      |||+.|+++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999975


No 333
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00  E-value=7.2e-39  Score=321.55  Aligned_cols=240  Identities=27%  Similarity=0.415  Sum_probs=202.0

Q ss_pred             EEecCCcEEEEEEEEcCCCc--eEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        126 LIGEGSFGKVFKAIHLDLKK--TVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      .||+|+||.||+|....++.  .+|+|.+... ........+.+|+.+++++ .||||+++++++...+.++++|||+. 
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            58999999999999988776  4688877532 2334456788999999999 89999999999999999999999987 


Q ss_pred             CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccce
Q psy18060        202 MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFAR  265 (549)
Q Consensus       202 gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~  265 (549)
                      |+|.+++..+.                .+++..+..++.|++.||+|||+.|++||||||+|||++.++.+||+|||+++
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            69999997643                47889999999999999999999999999999999999999999999999986


Q ss_pred             ecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHH
Q psy18060        266 SMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSET  343 (549)
Q Consensus       266 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~  343 (549)
                      ...... ......+++.|+|||++.+..++.++|||||||++|+|++ |..||...+.......+... ....|..++.+
T Consensus       161 ~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (270)
T cd05047         161 GQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDE  239 (270)
T ss_pred             ccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHH
Confidence            332111 1112234667999999988889999999999999999997 99999888777777666544 33456678899


Q ss_pred             HHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        344 YKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       344 ~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+++.+||..+|.+|||+.+++.
T Consensus       240 ~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         240 VYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHHcccChhhCCCHHHHHH
Confidence            999999999999999999999875


No 334
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=100.00  E-value=6.4e-39  Score=326.31  Aligned_cols=248  Identities=22%  Similarity=0.341  Sum_probs=205.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCC--------------ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLK--------------KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFI  184 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~--------------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~  184 (549)
                      .+|++.+.||+|+||.||+|.+..++              ..||+|.+... ........+.+|++++++++||||++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            57999999999999999999875432              35899998653 3344556789999999999999999999


Q ss_pred             EEEeeCCEEEEEEecCC-CCHHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEe
Q psy18060        185 ASHETLNEFVLITEFAH-MSLSNLLEQRK------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN  251 (549)
Q Consensus       185 ~~~~~~~~~~iV~E~~~-gsL~~~l~~~~------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~  251 (549)
                      +++...+..++||||+. ++|.+++....            .+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~  163 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG  163 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence            99999999999999998 58999986532            368888999999999999999999999999999999999


Q ss_pred             cCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHHH
Q psy18060        252 KDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM--GHPPFKTVSILHLIR  327 (549)
Q Consensus       252 ~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt--G~~Pf~~~~~~~~~~  327 (549)
                      .++.+||+|||+++.......  ......+++.|+|||++.+..++.++|||||||++|+|++  |..||...+......
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~  243 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE  243 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence            999999999999976543221  1123345778999999988889999999999999999988  778998776665554


Q ss_pred             HHhc--------CCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        328 LLKT--------QDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       328 ~i~~--------~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+..        .....++..++.+.+|+.+||+.||.+|||+.+|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            4321        112335568899999999999999999999999864


No 335
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00  E-value=1.7e-38  Score=314.19  Aligned_cols=242  Identities=23%  Similarity=0.376  Sum_probs=204.8

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CC
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MS  203 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gs  203 (549)
                      +.||+|+||.||+|... .+..+|+|.+.... .......+.+|+++++.++||||+++++++...+..++||||+. ++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            36899999999999865 58899999986543 33344568899999999999999999999999999999999987 58


Q ss_pred             HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc-cccCCCC
Q psy18060        204 LSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML-TSIKGTP  281 (549)
Q Consensus       204 L~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~-~~~~GT~  281 (549)
                      |.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......... ....+++
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            99988754 468999999999999999999999999999999999999999999999999987654322111 1223466


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQR  359 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~R  359 (549)
                      .|+|||++.+..++.++||||||+++|++++ |..||...........+... ....|..++..+.+++.+||..+|++|
T Consensus       159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            7999999988889999999999999999998 99999988777766666544 234566789999999999999999999


Q ss_pred             CCHHHHhcC
Q psy18060        360 LSWPELLHH  368 (549)
Q Consensus       360 ps~~elL~H  368 (549)
                      ||+.++++.
T Consensus       239 p~~~~l~~~  247 (250)
T cd05085         239 PKFSELQKE  247 (250)
T ss_pred             CCHHHHHHH
Confidence            999998753


No 336
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=1.1e-38  Score=330.91  Aligned_cols=250  Identities=28%  Similarity=0.469  Sum_probs=211.8

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCC-------CceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDL-------KKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET  189 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~-------~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~  189 (549)
                      ..+|++.+.||+|+||.||+|.+...       +..+|+|.+... ........+.+|+++++++ .||||+++++++..
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            35799999999999999999986432       236899987643 3344567888999999999 89999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK  252 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~  252 (549)
                      .+.++++|||++ |+|.+++.++.                .++...+..++.|++.||.|||++||+||||||+|||++.
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~  169 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE  169 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence            999999999997 59999997642                3677888999999999999999999999999999999999


Q ss_pred             CCcEEEeecccceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q psy18060        253 DGVAMLCDFGFARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLL  329 (549)
Q Consensus       253 ~g~vKL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i  329 (549)
                      ++.+||+|||+++........  .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  249 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL  249 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            999999999999765432211  122334567999999999999999999999999999998 89999998888887777


Q ss_pred             hcCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        330 KTQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       330 ~~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .... ...|...+.++.+++.+||..+|.+|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         250 KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            6543 34566789999999999999999999999999886


No 337
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00  E-value=1.2e-38  Score=324.89  Aligned_cols=248  Identities=16%  Similarity=0.226  Sum_probs=194.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCC---CceEEEEEEecCCCChHHH---------HHHHHHHHHHHhcCCCCeeEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDL---KKTVALKIISKSGRSGKEL---------SSLKQECEIQKHLAHPNIIKFIAS  186 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~---~~~vAvK~i~~~~~~~~~~---------~~~~~Ei~il~~l~hpnIv~l~~~  186 (549)
                      .+|++.+.||+|+||.||+|.+..+   +..+|+|+...........         .....+...+..+.|+|+++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5799999999999999999998877   6677887654322111000         011223344556789999999987


Q ss_pred             EeeCC----EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecc
Q psy18060        187 HETLN----EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFG  262 (549)
Q Consensus       187 ~~~~~----~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFG  262 (549)
                      +....    ..+++++++..++.+.+......++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFG  171 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYG  171 (294)
T ss_pred             eeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcC
Confidence            65443    34788888888888888776668899999999999999999999999999999999999999999999999


Q ss_pred             cceecccCc-------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-H--------HHH
Q psy18060        263 FARSMAVGT-------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI-L--------HLI  326 (549)
Q Consensus       263 la~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~--------~~~  326 (549)
                      +|+......       .......||+.|+|||+..+..++.++|||||||++|+|++|+.||.+... .        +..
T Consensus       172 la~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~  251 (294)
T PHA02882        172 IASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI  251 (294)
T ss_pred             CceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH
Confidence            998664221       112334699999999999999999999999999999999999999987632 1        222


Q ss_pred             HHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        327 RLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       327 ~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ..+..+... ++..++.+.++++.|+..+|.+||+++++++
T Consensus       252 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        252 KRLHEGKIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHhhhhhhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            333333332 3456899999999999999999999999864


No 338
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=100.00  E-value=1.4e-38  Score=320.72  Aligned_cols=249  Identities=20%  Similarity=0.355  Sum_probs=210.5

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-CCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-LNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~  192 (549)
                      .++|++.+.||+|+||.||+|.+..    ++..+|+|.+... ........+.+|+.+++.+.||||+++++++.. ...
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            4679999999999999999999876    3578999987643 344556778899999999999999999998655 567


Q ss_pred             EEEEEecCC-CCHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccc
Q psy18060        193 FVLITEFAH-MSLSNLLEQR--------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~--------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                      .+++++++. ++|.+++...        ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence            889999987 6899998763        4589999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCccc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCcc
Q psy18060        264 ARSMAVGTHM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQ  339 (549)
Q Consensus       264 a~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~  339 (549)
                      ++.+......  .....++..|+|||++.+..++.++|||||||++|++++ |+.||...+..+....+... ....+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  243 (280)
T cd05043         164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPIN  243 (280)
T ss_pred             cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCc
Confidence            9865433211  122346778999999988889999999999999999999 99999988877776665544 2234556


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +++++.+++.+||..+|++|||+.++++
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         244 CPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            7899999999999999999999999874


No 339
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00  E-value=1.3e-38  Score=319.82  Aligned_cols=249  Identities=22%  Similarity=0.385  Sum_probs=212.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCC-----CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDL-----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~-----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ++|++++.||+|+||.||+|..+.+     .+.+|+|.+.... .......+.+|++++++++||||+++++++...+..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            6789999999999999999997643     4679999875432 233456789999999999999999999999988899


Q ss_pred             EEEEecCC-CCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccc
Q psy18060        194 VLITEFAH-MSLSNLLEQRK---------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~---------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                      ++||||++ ++|.+++....         .+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||+
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence            99999998 69999998765         689999999999999999999999999999999999999999999999999


Q ss_pred             ceecccCc-ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCC--CCcc
Q psy18060        264 ARSMAVGT-HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVT--FPSQ  339 (549)
Q Consensus       264 a~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~--~p~~  339 (549)
                      ++...... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+..+...  .+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  243 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEG  243 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCC
Confidence            86543221 11233456778999999988889999999999999999998 88999887777777777655433  3567


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      +++.+.+++.+||+.+|.+|||+.|++.+
T Consensus       244 ~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         244 CPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            89999999999999999999999999865


No 340
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00  E-value=1.1e-38  Score=324.63  Aligned_cols=248  Identities=23%  Similarity=0.363  Sum_probs=204.1

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcC----------------CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLD----------------LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIK  182 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~----------------~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~  182 (549)
                      ++|++.+.||+|+||.||++.+..                ++..+|+|.+... ........+.+|+++++.++||||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            469999999999999999986432                3456899998643 23344567889999999999999999


Q ss_pred             EEEEEeeCCEEEEEEecCC-CCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEE
Q psy18060        183 FIASHETLNEFVLITEFAH-MSLSNLLEQRK-----------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL  250 (549)
Q Consensus       183 l~~~~~~~~~~~iV~E~~~-gsL~~~l~~~~-----------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl  250 (549)
                      +++++...+..+++|||+. ++|.+++....           .+++..+..++.|++.||+|||+.|++||||||+|||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            9999999999999999987 69999987643           36778899999999999999999999999999999999


Q ss_pred             ecCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh--CCCCCCCCCHHHHH
Q psy18060        251 NKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM--GHPPFKTVSILHLI  326 (549)
Q Consensus       251 ~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt--G~~Pf~~~~~~~~~  326 (549)
                      +.++.++|+|||+++.......  ......+++.|+|||+..++.++.++|||||||++|||++  |..||...+..+..
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI  243 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence            9999999999999976543221  1122344678999999888889999999999999999998  78999877665554


Q ss_pred             HHHh--------cCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        327 RLLK--------TQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       327 ~~i~--------~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ....        ....+.|..+++.+.+|+.+||+.||.+|||+.+|++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         244 ENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            4321        1122345678899999999999999999999999864


No 341
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00  E-value=2.4e-38  Score=314.29  Aligned_cols=247  Identities=25%  Similarity=0.436  Sum_probs=210.3

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ..+|++.+.||+|+||.||++.+.. +..+|+|.+......   ...+.+|+++++.+.||||+++++++......+++|
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence            3578999999999999999998764 678999988654332   245788999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc-c
Q psy18060        198 EFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM-L  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~-~  274 (549)
                      ||+. ++|.+++... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||+++........ .
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  158 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS  158 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence            9987 5899988764 46899999999999999999999999999999999999999999999999998765432111 1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+..+ ....|...++.+.+++.+||
T Consensus       159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  238 (256)
T cd05112         159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCW  238 (256)
T ss_pred             CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHc
Confidence            12235678999999988889999999999999999998 99999988877777776554 23345667999999999999


Q ss_pred             hhCcCCCCCHHHHhcC
Q psy18060        353 EKDASQRLSWPELLHH  368 (549)
Q Consensus       353 ~~dP~~Rps~~elL~H  368 (549)
                      +.+|.+|||+.+++++
T Consensus       239 ~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         239 KERPEDRPSFSLLLHQ  254 (256)
T ss_pred             ccChhhCCCHHHHHHh
Confidence            9999999999999864


No 342
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00  E-value=3.6e-39  Score=318.14  Aligned_cols=228  Identities=23%  Similarity=0.305  Sum_probs=194.9

Q ss_pred             CCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCHHHHH
Q psy18060        130 GSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSLSNLL  208 (549)
Q Consensus       130 G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~~~l  208 (549)
                      |.+|.||++.+..+++.||+|.+....       ...+|...+....||||+++++++...+..+++|||+. |+|.+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            889999999999999999999997542       12334455556679999999999999999999999998 5899999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCccccccc
Q psy18060        209 EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPEL  288 (549)
Q Consensus       209 ~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~  288 (549)
                      .+...+++..+..++.|++.||+|||++||+||||||+||+++.++.++++|||.+......   .....++..|+|||.
T Consensus        77 ~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~  153 (237)
T cd05576          77 SKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEV  153 (237)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcc
Confidence            88888999999999999999999999999999999999999999999999999987655432   233456788999999


Q ss_pred             ccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCH-----H
Q psy18060        289 IAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW-----P  363 (549)
Q Consensus       289 l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~-----~  363 (549)
                      +.+..++.++|+||+||++|+|++|+.||.......    .......+|+.+++.++++|.+||+.||.+||++     +
T Consensus       154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~  229 (237)
T cd05576         154 GGISEETEACDWWSLGAILFELLTGKTLVECHPSGI----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVE  229 (237)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchH
Confidence            988889999999999999999999999886543211    0112335677899999999999999999999986     9


Q ss_pred             HHhcCccc
Q psy18060        364 ELLHHPLV  371 (549)
Q Consensus       364 elL~Hpw~  371 (549)
                      ++++||||
T Consensus       230 ~~~~h~~~  237 (237)
T cd05576         230 DIKSHPFF  237 (237)
T ss_pred             HHHcCCCC
Confidence            99999997


No 343
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00  E-value=2.5e-38  Score=318.87  Aligned_cols=247  Identities=23%  Similarity=0.428  Sum_probs=210.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCc----eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKK----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      .+|++.+.||+|+||.||+|.+..++.    .+|+|.+..... ......+.+|+.+++.+.||||+++++++.. ...+
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            578999999999999999999877665    589998765432 3445678899999999999999999999877 6789


Q ss_pred             EEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        195 LITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      ++|||+. |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~  164 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK  164 (279)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence            9999987 6899998874 4689999999999999999999999999999999999999999999999999987653322


Q ss_pred             ccc--ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHH
Q psy18060        273 MLT--SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLV  348 (549)
Q Consensus       273 ~~~--~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI  348 (549)
                      ...  ...++..|+|||.+....++.++|+|||||++|++++ |+.||.+....+....+..+. ...|...+..+.+++
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVL  244 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHH
Confidence            111  1224567999999988889999999999999999998 999999988877776665543 445667889999999


Q ss_pred             HHhchhCcCCCCCHHHHhc
Q psy18060        349 KGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       349 ~~~L~~dP~~Rps~~elL~  367 (549)
                      .+||..+|..|||+.++++
T Consensus       245 ~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         245 VKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHcCCChhhCCCHHHHHH
Confidence            9999999999999998854


No 344
>KOG2345|consensus
Probab=100.00  E-value=2.7e-40  Score=314.06  Aligned_cols=251  Identities=28%  Similarity=0.441  Sum_probs=205.5

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe-----eC
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE-----TL  190 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-----~~  190 (549)
                      -+.++|++.+.||+|||+.||.+.+..++..||+|++...+  .+..+..++|+...++++||||++++++..     ..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence            34578999999999999999999999999999999997754  456778899999999999999999887642     23


Q ss_pred             CEEEEEEecCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--CccccccCCcEEEecCCcEEEeeccc
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQR----KKLSETICVQILSNLISALYYLHSNR--VLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~----~~l~e~~~~~i~~qIl~aL~yLH~~g--IiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                      ...||++.|.. |+|.+.|...    ..++|.++..|+.+|+.||++||+..  +.||||||.|||+++.+.++|.|||.
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS  175 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGS  175 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccC
Confidence            45899999765 8999998753    35899999999999999999999998  99999999999999999999999999


Q ss_pred             ceecccCc---------ccccccCCCCccccccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Q psy18060        264 ARSMAVGT---------HMLTSIKGTPLYMAPELIA---ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI--LHLIRLL  329 (549)
Q Consensus       264 a~~~~~~~---------~~~~~~~GT~~Y~APE~l~---~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~--~~~~~~i  329 (549)
                      ++...-..         +...+...|..|+|||.+.   +...+.++|||||||+||+|+.|..||...-.  ..+.-.+
T Consensus       176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv  255 (302)
T KOG2345|consen  176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV  255 (302)
T ss_pred             ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence            87553211         1122345789999999984   45578999999999999999999999953211  0111122


Q ss_pred             hcCCCCCC--ccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        330 KTQDVTFP--SQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       330 ~~~~~~~p--~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .++.+.+|  +.+|+.+.++|+.||++||.+||++.+++.+
T Consensus       256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            34445555  3489999999999999999999999999865


No 345
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00  E-value=3.1e-38  Score=316.46  Aligned_cols=248  Identities=29%  Similarity=0.418  Sum_probs=208.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCC---CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDL---KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~---~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      .+|.+.+.||+|+||.||+|.+...   ...+|+|..... ......+.+.+|+.+++.+.||||+++++++.+ ...++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC-TSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc-CCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            5688999999999999999987654   346899987543 224455678899999999999999999998875 45789


Q ss_pred             EEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc-
Q psy18060        196 ITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH-  272 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~-  272 (549)
                      ||||+. ++|.+++.+.. .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||+++....... 
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          84 VMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             EEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence            999997 68999998744 589999999999999999999999999999999999999999999999999876543321 


Q ss_pred             cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHH
Q psy18060        273 MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKG  350 (549)
Q Consensus       273 ~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~  350 (549)
                      ..+...+++.|+|||.+....++.++|||||||++|+|++ |..||...+..+....+..+ ....|+.+++.+.++|.+
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  243 (270)
T cd05056         164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK  243 (270)
T ss_pred             ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHH
Confidence            1122234567999999988889999999999999999986 99999988877766666554 345677889999999999


Q ss_pred             hchhCcCCCCCHHHHhcC
Q psy18060        351 LLEKDASQRLSWPELLHH  368 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~H  368 (549)
                      ||..+|.+|||+.+++..
T Consensus       244 ~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         244 CWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HcCCChhhCcCHHHHHHH
Confidence            999999999999998764


No 346
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00  E-value=2.2e-38  Score=319.96  Aligned_cols=245  Identities=28%  Similarity=0.421  Sum_probs=198.0

Q ss_pred             eeEEEEEecCCcEEEEEEE----EcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAI----HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNEFV  194 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~----~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~~~  194 (549)
                      |++.+.||+|+||+||++.    ...++..+|+|.+.... .......+.+|+++++.++||||+++++++..  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ   84 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence            3899999999999998764    34567889999986542 22344677889999999999999999998755  34689


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      ++|||+. ++|.+++... .+++.+++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++........
T Consensus        85 lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          85 LIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             EEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence            9999998 5899988764 6999999999999999999999999999999999999999999999999999766433211


Q ss_pred             ---ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---------------HHHHHHhc-CCC
Q psy18060        274 ---LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------------HLIRLLKT-QDV  334 (549)
Q Consensus       274 ---~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~---------------~~~~~i~~-~~~  334 (549)
                         .....++..|+|||++.+..++.++|||||||++|+|++|..||......               .....+.. ...
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL  243 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC
Confidence               12234567799999998888999999999999999999999998643211               11111111 112


Q ss_pred             CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       335 ~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +.|..++.++.+++.+||+.+|.+|||+.+++.
T Consensus       244 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            335678899999999999999999999999875


No 347
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=100.00  E-value=3.6e-39  Score=321.57  Aligned_cols=236  Identities=21%  Similarity=0.353  Sum_probs=197.1

Q ss_pred             EEecCCcEEEEEEEEcCCCce-------EEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        126 LIGEGSFGKVFKAIHLDLKKT-------VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~~~-------vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .||+|+||.||+|.+..++..       +|+|.+....  ....+.+.+|+.+++.+.||||+++++++...+..++|||
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   79 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE   79 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence            589999999999998665443       8888875422  2344577889999999999999999999999889999999


Q ss_pred             cCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc--------EEEeecccceecc
Q psy18060        199 FAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV--------AMLCDFGFARSMA  268 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~--------vKL~DFGla~~~~  268 (549)
                      |++ |+|.+++..++ .+++..+..++.||+.||+|||++||+||||||+||+++.++.        ++++|||++....
T Consensus        80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            998 58999997654 5899999999999999999999999999999999999987764        6999999886553


Q ss_pred             cCcccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHH
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMG-HPPFKTVSILHLIRLLKTQDVTFPSQVSETYKD  346 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~d  346 (549)
                      ..    ....+++.|+|||++.+ ..++.++|||||||++|+|++| .+||...+....... ......+|...++++.+
T Consensus       160 ~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  234 (258)
T cd05078         160 PK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YEDRHQLPAPKWTELAN  234 (258)
T ss_pred             Cc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HHccccCCCCCcHHHHH
Confidence            22    33468899999999976 4589999999999999999998 577776665544433 33445677778899999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcC
Q psy18060        347 LVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~H  368 (549)
                      +|.+||+.||.+|||++++++.
T Consensus       235 li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         235 LINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHhccChhhCCCHHHHHHh
Confidence            9999999999999999999864


No 348
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00  E-value=2e-38  Score=337.38  Aligned_cols=252  Identities=26%  Similarity=0.419  Sum_probs=208.1

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEc-----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEee
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHL-----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHET  189 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~  189 (549)
                      ...++|.+.+.||+|+||.||+|.+.     .++..||+|++..... ......+.+|++++..+. ||||+++++++..
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~  112 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTK  112 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence            34456888999999999999999864     3456899999975432 333456889999999997 9999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHhcC--------------------------------------------------------
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQRK--------------------------------------------------------  212 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~~~--------------------------------------------------------  212 (549)
                      .+..++||||+. |+|.+++.+.+                                                        
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM  192 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence            899999999998 69999986532                                                        


Q ss_pred             ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEE
Q psy18060        213 ------------------------------------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLL  250 (549)
Q Consensus       213 ------------------------------------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl  250 (549)
                                                                .+++..+..++.||+.||.|||+.||+||||||+|||+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl  272 (401)
T cd05107         193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI  272 (401)
T ss_pred             hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence                                                      25667788999999999999999999999999999999


Q ss_pred             ecCCcEEEeecccceecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q psy18060        251 NKDGVAMLCDFGFARSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR  327 (549)
Q Consensus       251 ~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~  327 (549)
                      +.++.+||+|||+++.......  ......+++.|+|||.+.+..++.++|||||||++|||++ |..||......+...
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~  352 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFY  352 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHH
Confidence            9999999999999976532211  1223457888999999998889999999999999999998 899998765544433


Q ss_pred             H-HhcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        328 L-LKTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       328 ~-i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      . +..+ ....|..++.++.+++.+||..+|.+||++.+|++.
T Consensus       353 ~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         353 NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3 3322 334567789999999999999999999999999864


No 349
>KOG1187|consensus
Probab=100.00  E-value=4.3e-39  Score=336.46  Aligned_cols=257  Identities=27%  Similarity=0.422  Sum_probs=205.5

Q ss_pred             ccccccccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEE
Q psy18060        108 PVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASH  187 (549)
Q Consensus       108 ~~~~~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~  187 (549)
                      .+.........++|.....||+|+||.||+|.... +..||||.+.......  ...+.+|+.++.+++|||+|+++|+|
T Consensus        64 ~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   64 SFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             eeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            34555566677889989999999999999998876 4899999886644322  34599999999999999999999999


Q ss_pred             eeCC-EEEEEEecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CCccccccCCcEEEecCCcEEEee
Q psy18060        188 ETLN-EFVLITEFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSN---RVLHRDLKPQNVLLNKDGVAMLCD  260 (549)
Q Consensus       188 ~~~~-~~~iV~E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~---gIiHrDIKP~NILl~~~g~vKL~D  260 (549)
                      .+.+ ..+||+||+. |+|.++|....  .++|....+|+.+++.||+|||+.   .||||||||+|||||++...||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            9888 5999999987 89999998765  899999999999999999999986   399999999999999999999999


Q ss_pred             cccceeccc-CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHH-HHHhcC
Q psy18060        261 FGFARSMAV-GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS------ILHLI-RLLKTQ  332 (549)
Q Consensus       261 FGla~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~------~~~~~-~~i~~~  332 (549)
                      ||+|+.... .....+...||.+|+|||++..+..+.|+|||||||+|.||+||+.|.....      ..... ..+..+
T Consensus       221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~  300 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG  300 (361)
T ss_pred             ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence            999966543 3222222279999999999999999999999999999999999998886432      11111 112221


Q ss_pred             C------CCCC-ccCC--HH---HHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        333 D------VTFP-SQVS--ET---YKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       333 ~------~~~p-~~~s--~~---~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .      ..+. ...+  ..   +..+..+|++.+|..||++.|+++
T Consensus       301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            1      1111 2233  23   446677999999999999998743


No 350
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00  E-value=4.3e-38  Score=313.47  Aligned_cols=243  Identities=22%  Similarity=0.394  Sum_probs=199.0

Q ss_pred             EEEecCCcEEEEEEEEcC---CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe-eCCEEEEEEecC
Q psy18060        125 CLIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE-TLNEFVLITEFA  200 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~~~iV~E~~  200 (549)
                      +.||+|+||.||+|.+..   .+..+|+|.+... ........+.+|+.+++.++||||+++++++. ..+..+++|||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   79 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM   79 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence            368999999999998653   3457999987542 23344567888999999999999999999764 455678999998


Q ss_pred             C-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc----ccc
Q psy18060        201 H-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT----HML  274 (549)
Q Consensus       201 ~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~----~~~  274 (549)
                      . ++|.+++.+. ..+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++......    ...
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            7 6999999764 456788888999999999999999999999999999999999999999999997553211    111


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L  352 (549)
                      ....+++.|+|||.+.+..++.++|||||||++|||++ |.+||...+.......+..+. ...|..+++.+.+++.+||
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  239 (262)
T cd05058         160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCW  239 (262)
T ss_pred             ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHc
Confidence            23346778999999988889999999999999999999 577888777766666655443 3345567899999999999


Q ss_pred             hhCcCCCCCHHHHhcC
Q psy18060        353 EKDASQRLSWPELLHH  368 (549)
Q Consensus       353 ~~dP~~Rps~~elL~H  368 (549)
                      ..+|++||++.++++.
T Consensus       240 ~~~p~~Rp~~~~il~~  255 (262)
T cd05058         240 HPKPEMRPTFSELVSR  255 (262)
T ss_pred             CCChhhCCCHHHHHHH
Confidence            9999999999999764


No 351
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00  E-value=1.7e-38  Score=331.02  Aligned_cols=250  Identities=27%  Similarity=0.454  Sum_probs=203.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEE-----cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEee-C
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIH-----LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHET-L  190 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~-----~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~-~  190 (549)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|.+.... .......+.+|+.++..+ +||||+++++++.. .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            45799999999999999999984     3457889999986543 234456788999999999 68999999997754 4


Q ss_pred             CEEEEEEecCC-CCHHHHHHhcC---------------------------------------------------------
Q psy18060        191 NEFVLITEFAH-MSLSNLLEQRK---------------------------------------------------------  212 (549)
Q Consensus       191 ~~~~iV~E~~~-gsL~~~l~~~~---------------------------------------------------------  212 (549)
                      ..++++|||++ |+|.+++....                                                         
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            56899999998 58999986531                                                         


Q ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cccccCCC
Q psy18060        213 ----------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLTSIKGT  280 (549)
Q Consensus       213 ----------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~~~~GT  280 (549)
                                .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......  ......++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP  244 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCC
Confidence                      367778889999999999999999999999999999999999999999999876532211  11223456


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcC
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILH-LIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDAS  357 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~-~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~  357 (549)
                      +.|+|||++.+..++.++|||||||++|+|++ |..||....... ....+..+ ....|...++++.+++.+||+.||.
T Consensus       245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~  324 (343)
T cd05103         245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS  324 (343)
T ss_pred             cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChh
Confidence            78999999988889999999999999999997 999998754332 22333222 3345566789999999999999999


Q ss_pred             CCCCHHHHhcC
Q psy18060        358 QRLSWPELLHH  368 (549)
Q Consensus       358 ~Rps~~elL~H  368 (549)
                      +|||+.+|++|
T Consensus       325 ~Rps~~eil~~  335 (343)
T cd05103         325 QRPTFSELVEH  335 (343)
T ss_pred             hCcCHHHHHHH
Confidence            99999999886


No 352
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00  E-value=8.9e-38  Score=311.67  Aligned_cols=246  Identities=23%  Similarity=0.363  Sum_probs=207.7

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      ..++|++.+.||+|+||.||++.... +..+|+|.+...   ......+.+|+++++.++||||+++++.+.. ...+++
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecC-CccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence            35789999999999999999998654 567999987643   2234578889999999999999999999877 678999


Q ss_pred             EecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc
Q psy18060        197 TEFAH-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~  273 (549)
                      |||++ ++|.+++.+.  ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||.+.........
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            99997 6999999763  45788889999999999999999999999999999999999999999999998765432211


Q ss_pred             -ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHH
Q psy18060        274 -LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKG  350 (549)
Q Consensus       274 -~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~  350 (549)
                       .....++..|+|||++.+..++.++|+|||||++|++++ |..||...+.......+.... ...+...+.++.+++.+
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  238 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR  238 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHH
Confidence             122345677999999988889999999999999999998 999999888777776665542 33456789999999999


Q ss_pred             hchhCcCCCCCHHHHhc
Q psy18060        351 LLEKDASQRLSWPELLH  367 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~  367 (549)
                      ||.++|++||++.++++
T Consensus       239 ~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         239 CWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HcccCcccCcCHHHHHH
Confidence            99999999999988753


No 353
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00  E-value=3.3e-38  Score=319.09  Aligned_cols=248  Identities=25%  Similarity=0.416  Sum_probs=202.6

Q ss_pred             ceeEEEEEecCCcEEEEEEEE----cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeC--CEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIH----LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEF  193 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~----~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~~  193 (549)
                      .|++++.||+|+||.||.|..    ..++..||+|.+.... .......+.+|+.+++.+.||||+++++++...  ...
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            478999999999999999974    4568899999986442 334456789999999999999999999988765  568


Q ss_pred             EEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ++||||+. ++|.+++.+. ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||+++......
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            99999997 5899999765 358999999999999999999999999999999999999999999999999998664332


Q ss_pred             c---cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC---------------CHHHHHHHHhcC-
Q psy18060        272 H---MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV---------------SILHLIRLLKTQ-  332 (549)
Q Consensus       272 ~---~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~---------------~~~~~~~~i~~~-  332 (549)
                      .   ......|+..|+|||++.+..++.++|||||||++|+|++|..|+...               ........+... 
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK  243 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence            1   112345777899999998888999999999999999999987665321               111122222222 


Q ss_pred             CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        333 DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       333 ~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ..+.+..+++.+.+|+.+||+.+|.+|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            233456789999999999999999999999999864


No 354
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00  E-value=3.9e-38  Score=322.13  Aligned_cols=249  Identities=23%  Similarity=0.403  Sum_probs=207.0

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCc----eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKK----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      ..+|+..+.||+|+||.||+|.+..++.    .+|+|.+.... .......+.+|+.+++.+.||||+++++++... ..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~   83 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI   83 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence            3568899999999999999999887776    46888876432 233344678999999999999999999988654 46


Q ss_pred             EEEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc
Q psy18060        194 VLITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~  271 (549)
                      ++++||+. |+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++......
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence            78899987 68999987654 68999999999999999999999999999999999999999999999999998664332


Q ss_pred             cc--ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHH
Q psy18060        272 HM--LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDL  347 (549)
Q Consensus       272 ~~--~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dl  347 (549)
                      ..  .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........+..+. ...++..+..+.++
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV  243 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence            21  223345778999999998899999999999999999997 999998877666555554432 33456688999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcC
Q psy18060        348 VKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~H  368 (549)
                      +.+||..+|++||++.++++.
T Consensus       244 i~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         244 MVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998775


No 355
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00  E-value=4.4e-38  Score=312.50  Aligned_cols=240  Identities=25%  Similarity=0.430  Sum_probs=205.1

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .++|++.+.||+|+||.||++..  +++.+|+|.+....    ....+.+|+.+++.++||||+++++++... ..+++|
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~   77 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM   77 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence            46799999999999999999864  58889999986432    235678999999999999999999998654 479999


Q ss_pred             ecCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        198 EFAH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ||+. ++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||+++.....   .
T Consensus        78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---~  154 (254)
T cd05083          78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---V  154 (254)
T ss_pred             ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc---C
Confidence            9987 59999997653  5899999999999999999999999999999999999999999999999998754322   1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHhc
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~~L  352 (549)
                      .....+..|+|||.+.+..++.++|+|||||++|+|++ |++||...+.......+..+. ...+..+++.+.+++.+||
T Consensus       155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  234 (254)
T cd05083         155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCW  234 (254)
T ss_pred             CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHc
Confidence            22345678999999988889999999999999999997 999999888877766665542 3345678999999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      ..+|.+||++.+++.
T Consensus       235 ~~~p~~Rp~~~~l~~  249 (254)
T cd05083         235 ETEPKKRPSFHKLRE  249 (254)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999865


No 356
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00  E-value=3.4e-38  Score=315.93  Aligned_cols=236  Identities=20%  Similarity=0.337  Sum_probs=192.7

Q ss_pred             EEecCCcEEEEEEEEcCC------------CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        126 LIGEGSFGKVFKAIHLDL------------KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~------------~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      .||+|+||.||+|.....            ...+|+|.+....  ......+.+|+.+++.++||||+++++++......
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~   79 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN   79 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            589999999999985422            2358888865432  23345778899999999999999999999988889


Q ss_pred             EEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc-------EEEeecccc
Q psy18060        194 VLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV-------AMLCDFGFA  264 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~-------vKL~DFGla  264 (549)
                      +++|||++ ++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.       ++++|||++
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            99999998 4787777653 56899999999999999999999999999999999999987664       899999998


Q ss_pred             eecccCcccccccCCCCccccccccc-CCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhcCCCCCCccCCH
Q psy18060        265 RSMAVGTHMLTSIKGTPLYMAPELIA-ERPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLKTQDVTFPSQVSE  342 (549)
Q Consensus       265 ~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLl-tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  342 (549)
                      ......    ....||..|+|||.+. +..++.++|||||||++|+|+ +|..||......+... +...........++
T Consensus       160 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~  234 (262)
T cd05077         160 ITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCMLVTPSCK  234 (262)
T ss_pred             ccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccCCCCChH
Confidence            655322    3346888999999986 567899999999999999997 5899998766554433 22333334445678


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ++.++|.+||+.||.+||++.+|+++
T Consensus       235 ~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         235 ELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            89999999999999999999999875


No 357
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00  E-value=6.7e-38  Score=316.37  Aligned_cols=247  Identities=26%  Similarity=0.421  Sum_probs=199.9

Q ss_pred             cceeEEEEEecCCcEEEEEEE----EcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAI----HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNE  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~----~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~  192 (549)
                      .+|++.+.||+|+||.||+|.    ...++..||+|.+...  .......+.+|+++++.++||||+++++++..  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            468999999999999999997    3457889999998653  23445678899999999999999999987643  346


Q ss_pred             EEEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        193 FVLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      +++||||+. ++|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence            899999997 6999999764 46899999999999999999999999999999999999999999999999999876433


Q ss_pred             ccc---ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHhc
Q psy18060        271 THM---LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL----------------HLIRLLKT  331 (549)
Q Consensus       271 ~~~---~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~----------------~~~~~i~~  331 (549)
                      ...   .....++..|+|||++.+..++.++|||||||++|||++|..|+......                .....+..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN  241 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence            211   11123445699999999888999999999999999999988776433211                11111111


Q ss_pred             C-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        332 Q-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       332 ~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      . ..+.+..++.++.+++.+||..+|++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            1 22345678899999999999999999999999975


No 358
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00  E-value=4.7e-38  Score=314.99  Aligned_cols=240  Identities=23%  Similarity=0.352  Sum_probs=192.6

Q ss_pred             EEecCCcEEEEEEEEcC--CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        126 LIGEGSFGKVFKAIHLD--LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~--~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      .||+|+||.||+|....  ....+|+|.+... ........+.+|+.+++.++||||+++++.+......++||||+. |
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            58999999999996533  3456888877543 233445677889999999999999999999999999999999998 5


Q ss_pred             CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--ccc
Q psy18060        203 SLSNLLEQRK-----KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--MLT  275 (549)
Q Consensus       203 sL~~~l~~~~-----~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~~  275 (549)
                      +|.+++....     .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......  ...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence            9999997643     246778899999999999999999999999999999999999999999999865433211  112


Q ss_pred             ccCCCCccccccccc-------CCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh-cCCCC-----CCccCC
Q psy18060        276 SIKGTPLYMAPELIA-------ERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLK-TQDVT-----FPSQVS  341 (549)
Q Consensus       276 ~~~GT~~Y~APE~l~-------~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~-~~~~~-----~p~~~s  341 (549)
                      ...+++.|+|||++.       ...++.++|||||||++|+|++ |..||...........+. .....     .+..++
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS  240 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence            334677899999874       2457889999999999999999 889998877665554432 22222     234678


Q ss_pred             HHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        342 ETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       342 ~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +.+.+++..|+ .||.+|||+++|++
T Consensus       241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         241 DRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHHHHh-cCcccccCHHHHHH
Confidence            99999999998 59999999999875


No 359
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00  E-value=4.8e-38  Score=315.06  Aligned_cols=248  Identities=24%  Similarity=0.369  Sum_probs=206.2

Q ss_pred             eeEEEEEecCCcEEEEEEEEcC---CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC------
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN------  191 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~------  191 (549)
                      |.+.+.||+|+||.||+|....   +++.+|+|++..........+.+.+|+++++.++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            5678899999999999998643   5788999999765555556677889999999999999999999875432      


Q ss_pred             EEEEEEecCC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        192 EFVLITEFAH-MSLSNLLEQR------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                      ..+++++|+. |+|.+++...      ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            2478889887 6888877432      24788999999999999999999999999999999999999999999999999


Q ss_pred             eecccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccC
Q psy18060        265 RSMAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQV  340 (549)
Q Consensus       265 ~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~  340 (549)
                      +....+..  ......+++.|++||.+.+..++.++|||||||++|+|++ |++||...+.......+... ....+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  240 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDC  240 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCC
Confidence            86643321  1223345678999999998889999999999999999999 99999888877766665544 33455678


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      ++.+.+++.+||+.+|.+|||+.+++.+
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8999999999999999999999998764


No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00  E-value=4.6e-38  Score=317.16  Aligned_cols=236  Identities=20%  Similarity=0.300  Sum_probs=193.0

Q ss_pred             EEecCCcEEEEEEEEcCC------------------------CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCee
Q psy18060        126 LIGEGSFGKVFKAIHLDL------------------------KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNII  181 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~------------------------~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv  181 (549)
                      .||+|+||.||+|....+                        ...+|+|++....  ......+.+|+.+++.+.||||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv   79 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA   79 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence            589999999999975322                        2357888875432  22345677889999999999999


Q ss_pred             EEEEEEeeCCEEEEEEecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-----
Q psy18060        182 KFIASHETLNEFVLITEFAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-----  254 (549)
Q Consensus       182 ~l~~~~~~~~~~~iV~E~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-----  254 (549)
                      ++++++......++||||++ |+|..++.+ .+.+++..+..++.||+.||+|||++||+||||||+|||++..+     
T Consensus        80 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          80 FVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             eEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            99999999999999999998 578888865 46789999999999999999999999999999999999998654     


Q ss_pred             --cEEEeecccceecccCcccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHh
Q psy18060        255 --VAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIH-MGHPPFKTVSILHLIRLLK  330 (549)
Q Consensus       255 --~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLl-tG~~Pf~~~~~~~~~~~i~  330 (549)
                        .+|++|||++......    ....+++.|+|||.+.+ ..++.++|||||||++|||+ +|+.||...........+.
T Consensus       160 ~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  235 (274)
T cd05076         160 SPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYE  235 (274)
T ss_pred             cceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHH
Confidence              4899999988644321    23357888999998865 56899999999999999985 7999998776655444332


Q ss_pred             cCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        331 TQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       331 ~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                       ....+|...++.+.++|.+||+.+|.+|||+.+++++
T Consensus       236 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         236 -KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             -hccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence             3334556677899999999999999999999999875


No 361
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00  E-value=4.5e-38  Score=312.24  Aligned_cols=234  Identities=22%  Similarity=0.375  Sum_probs=193.6

Q ss_pred             EEEecCCcEEEEEEEEcCCC----------ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEE
Q psy18060        125 CLIGEGSFGKVFKAIHLDLK----------KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV  194 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~----------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  194 (549)
                      +.||+|+||.||+|.+..++          ..+++|.+.....   ....+.+|+.+++.++||||+++++++.. ...+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   76 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENI   76 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcE
Confidence            36899999999999998776          3477787654322   14678899999999999999999999877 7789


Q ss_pred             EEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-------cEEEeecccce
Q psy18060        195 LITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-------VAMLCDFGFAR  265 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-------~vKL~DFGla~  265 (549)
                      +||||+. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++       .+||+|||++.
T Consensus        77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            9999998 58999998766 799999999999999999999999999999999999999887       79999999997


Q ss_pred             ecccCcccccccCCCCcccccccccCC--CCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCCccCCH
Q psy18060        266 SMAVGTHMLTSIKGTPLYMAPELIAER--PYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDVTFPSQVSE  342 (549)
Q Consensus       266 ~~~~~~~~~~~~~GT~~Y~APE~l~~~--~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  342 (549)
                      ....    .....++..|+|||++.+.  .++.++|||||||++|+|++ |..||...+.......... ....|...+.
T Consensus       157 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (259)
T cd05037         157 TVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHRLPMPDCA  231 (259)
T ss_pred             cccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCCCCCCCch
Confidence            6543    1234577889999999776  78999999999999999999 6888877654443333322 2223333458


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+.++|.+||..+|.+|||+.++++
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999999875


No 362
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00  E-value=4.6e-38  Score=314.52  Aligned_cols=241  Identities=23%  Similarity=0.418  Sum_probs=203.0

Q ss_pred             EEecCCcEEEEEEEEcCCC------ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        126 LIGEGSFGKVFKAIHLDLK------KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~------~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      .||+|+||.||+|.....+      ..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            6899999999999876544      689999886532 223456788899999999999999999999988999999999


Q ss_pred             CC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-----cEEEeeccccee
Q psy18060        200 AH-MSLSNLLEQR-------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-----VAMLCDFGFARS  266 (549)
Q Consensus       200 ~~-gsL~~~l~~~-------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-----~vKL~DFGla~~  266 (549)
                      ++ ++|.+++...       ..+++..+..++.|++.||.|||+.|++||||||+||+++.++     .++|+|||+++.
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            87 6899998752       3478899999999999999999999999999999999999887     899999999876


Q ss_pred             cccCcc--cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCH
Q psy18060        267 MAVGTH--MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSE  342 (549)
Q Consensus       267 ~~~~~~--~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~  342 (549)
                      ......  ......++..|+|||++.+..++.++|||||||++|+|++ |+.||...+.......+... ....+..+|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPD  240 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchH
Confidence            533211  1122345788999999999899999999999999999998 99999888777766665543 3455677899


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+.++|.+||.++|.+||++.++++
T Consensus       241 ~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         241 KIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999999865


No 363
>KOG0695|consensus
Probab=100.00  E-value=3.5e-39  Score=316.79  Aligned_cols=267  Identities=23%  Similarity=0.438  Sum_probs=234.5

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCC
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHL-AHPNIIKFIASHETLN  191 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~  191 (549)
                      +.-.+++|.++++||+|+|++|.++++++|.+.||+|++++.-. ..+..+-+..|-.+..+. +||.+|-++.+|++..
T Consensus       245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes  324 (593)
T KOG0695|consen  245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES  324 (593)
T ss_pred             cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence            34457899999999999999999999999999999999987543 333455666676666665 7999999999999999


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      .+++|.||.+ |+|--+++++++++|+.++.+...|+.||.|||++|||.||||..|+|++..|++||+|+|+++.--.+
T Consensus       325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~  404 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP  404 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence            9999999998 589989999999999999999999999999999999999999999999999999999999999765555


Q ss_pred             cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHhcCCCCCCccCCH
Q psy18060        271 THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKT--------VSILHLIRLLKTQDVTFPSQVSE  342 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~--------~~~~~~~~~i~~~~~~~p~~~s~  342 (549)
                      .....++||||.|.|||++.+..|++.+|+|+|||+++||+.|+.||.-        .+..-+.+.|....+.+|..+|-
T Consensus       405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsv  484 (593)
T KOG0695|consen  405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSV  484 (593)
T ss_pred             CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeeh
Confidence            5667889999999999999999999999999999999999999999952        23344566778888899999999


Q ss_pred             HHHHHHHHhchhCcCCCCC------HHHHhcCcccCcccchhhh
Q psy18060        343 TYKDLVKGLLEKDASQRLS------WPELLHHPLVKDNLSSEIE  380 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps------~~elL~Hpw~~~~~~~~~~  380 (549)
                      .+..+++..|.+||..|+.      ..++..||||+...+..++
T Consensus       485 kas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~le  528 (593)
T KOG0695|consen  485 KASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLE  528 (593)
T ss_pred             hhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHh
Confidence            9999999999999999975      5799999999976665443


No 364
>KOG1026|consensus
Probab=100.00  E-value=7.4e-39  Score=348.74  Aligned_cols=247  Identities=24%  Similarity=0.432  Sum_probs=215.9

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcC-----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~-----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~  193 (549)
                      .+.+..+.||+|+||+||+|..-.     ....||||.++.. .+......|++|+.++..++|||||+++|++..++.+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            456678899999999999997542     3467999999654 3444678999999999999999999999999999999


Q ss_pred             EEEEecCC-CCHHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEE
Q psy18060        194 VLITEFAH-MSLSNLLEQRK--------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAML  258 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~--------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL  258 (549)
                      ++|+||+. |+|.++|..+.              +++..+...|+.||+.|+.||-++.+|||||...|+|+.++-.|||
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI  644 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI  644 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence            99999998 89999997542              2788899999999999999999999999999999999999999999


Q ss_pred             eecccceecccCccc-cc-ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCC-
Q psy18060        259 CDFGFARSMAVGTHM-LT-SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQDV-  334 (549)
Q Consensus       259 ~DFGla~~~~~~~~~-~~-~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~~-  334 (549)
                      +|||+++..-..... .. .-.-..+|||||.+..++|+.+|||||+||+|||+++ |+.||.+.+..++++.|..+.. 
T Consensus       645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL  724 (774)
T KOG1026|consen  645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLL  724 (774)
T ss_pred             cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcc
Confidence            999999876433211 11 1123567999999999999999999999999999997 9999999999999999998875 


Q ss_pred             CCCccCCHHHHHHHHHhchhCcCCCCCHHHHh
Q psy18060        335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELL  366 (549)
Q Consensus       335 ~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL  366 (549)
                      .-|.++|.++.+|+..||+.+|.+||++.||-
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            45689999999999999999999999999873


No 365
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00  E-value=1.2e-37  Score=311.80  Aligned_cols=248  Identities=29%  Similarity=0.553  Sum_probs=209.9

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcC-CCceEEEEEEecCC--------CChHHHHHHHHHHHHHHh-cCCCCeeEEEEEEee
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLD-LKKTVALKIISKSG--------RSGKELSSLKQECEIQKH-LAHPNIIKFIASHET  189 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~--------~~~~~~~~~~~Ei~il~~-l~hpnIv~l~~~~~~  189 (549)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+....        ........+.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47888999999999999999987 68899999886432        223345567788888765 799999999999999


Q ss_pred             CCEEEEEEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEEEeeccc
Q psy18060        190 LNEFVLITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       190 ~~~~~iV~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                      .+..+++|||+. ++|.+++..    ...+++..++.++.|++.||.|||+ .|++||||+|+|||++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            999999999987 488888743    3568999999999999999999996 6899999999999999999999999999


Q ss_pred             ceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CC-ccCC
Q psy18060        264 ARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-FP-SQVS  341 (549)
Q Consensus       264 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-~p-~~~s  341 (549)
                      +....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+...... .+ ..++
T Consensus       161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd08528         161 AKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYS  239 (269)
T ss_pred             eeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCC
Confidence            97765432 334567899999999999888999999999999999999999999888877776666554432 22 2578


Q ss_pred             HHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        342 ETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       342 ~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      +.+.++|.+||+.||.+||++.|+..+
T Consensus       240 ~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         240 EDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            999999999999999999999998654


No 366
>KOG0608|consensus
Probab=100.00  E-value=6.8e-39  Score=335.41  Aligned_cols=260  Identities=27%  Similarity=0.462  Sum_probs=221.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      .-|..++.||-|+||.|.++...+|...||+|.+.+.. ........++.|-.||...+++-||++|.+|++.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            34889999999999999999999999999999997754 33445667889999999999999999999999999999999


Q ss_pred             ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecc--c-----
Q psy18060        198 EFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMA--V-----  269 (549)
Q Consensus       198 E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~--~-----  269 (549)
                      +|+. |++-.+|-+.+.|.|..+++++.++..|+++.|+.|+|||||||.|||||.+|++||+|||+++-+.  .     
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            9988 5899999999999999999999999999999999999999999999999999999999999985321  1     


Q ss_pred             --Ccc---------------------------------cccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCC
Q psy18060        270 --GTH---------------------------------MLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGH  314 (549)
Q Consensus       270 --~~~---------------------------------~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~  314 (549)
                        +.+                                 ...+.+||+.|+|||++....|+..+|+||.|||||||+.|+
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~  868 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQ  868 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCC
Confidence              000                                 012357999999999999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHhcCC--CCCC--ccCCHHHHHHHHHhchhCcCCCCC---HHHHhcCcccCcccchhh
Q psy18060        315 PPFKTVSILHLIRLLKTQD--VTFP--SQVSETYKDLVKGLLEKDASQRLS---WPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       315 ~Pf~~~~~~~~~~~i~~~~--~~~p--~~~s~~~~dlI~~~L~~dP~~Rps---~~elL~Hpw~~~~~~~~~  379 (549)
                      +||-..++.+...++.+..  +.+|  .++|.++.++|.++. .++..|+.   ++||..||||+......+
T Consensus       869 ~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfssl  939 (1034)
T KOG0608|consen  869 PPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFSSL  939 (1034)
T ss_pred             CCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchHhh
Confidence            9998877766665554432  2334  579999999998854 46777874   678999999997655443


No 367
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00  E-value=1.3e-37  Score=312.00  Aligned_cols=241  Identities=22%  Similarity=0.326  Sum_probs=192.9

Q ss_pred             EEEecCCcEEEEEEEEc--CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-
Q psy18060        125 CLIGEGSFGKVFKAIHL--DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-  201 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-  201 (549)
                      +.||+|+||.||+|...  .++..+|+|.+..... ......+.+|+.+++.++||||+++++++......++||||++ 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence            35899999999999754  3456799998865432 3334568889999999999999999999998889999999998 


Q ss_pred             CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc--cc
Q psy18060        202 MSLSNLLEQRK-----KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH--ML  274 (549)
Q Consensus       202 gsL~~~l~~~~-----~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~--~~  274 (549)
                      |+|.+++....     ..++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||+++.......  ..
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~  159 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP  159 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence            68999987532     356778889999999999999999999999999999999999999999999865432211  11


Q ss_pred             cccCCCCcccccccccCC-------CCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc-CCCC-----CCccC
Q psy18060        275 TSIKGTPLYMAPELIAER-------PYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKT-QDVT-----FPSQV  340 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~-------~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~-~~~~-----~p~~~  340 (549)
                      ....|++.|+|||++.+.       .++.++|||||||++|+|++ |+.||......+....... ....     .+...
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd05087         160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL  239 (269)
T ss_pred             CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence            234578889999998542       35789999999999999996 9999987766555433222 1121     12246


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      ++.+.+++.+|+ .+|.+|||+++|+.
T Consensus       240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         240 SDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             ChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            889999999999 68999999999874


No 368
>KOG0669|consensus
Probab=100.00  E-value=1.1e-40  Score=316.86  Aligned_cols=260  Identities=31%  Similarity=0.524  Sum_probs=213.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee-------
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-------  189 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-------  189 (549)
                      ....|....+||+|.||.|++|+.+++|+.||+|++--......-.....+|+++|..++|+|++.+++.|..       
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r   94 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR   94 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence            3456888899999999999999999999999998753221111112344689999999999999998875532       


Q ss_pred             -CCEEEEEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        190 -LNEFVLITEFAHMSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       190 -~~~~~iV~E~~~gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                       ...+|+||.+|..+|..+|... .+++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+++.+
T Consensus        95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen   95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence             2358999999999999999876 68999999999999999999999999999999999999999999999999999766


Q ss_pred             ccCc----ccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--C-------
Q psy18060        268 AVGT----HMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--D-------  333 (549)
Q Consensus       268 ~~~~----~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~-------  333 (549)
                      ....    ...+..+-|.+|++||.+.+ ..|+.+.|||+.|||+.||+||.+-+.+.+..+.+..|..-  .       
T Consensus       175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP  254 (376)
T ss_pred             ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence            4322    22455677999999999876 67999999999999999999999999999887777665321  0       


Q ss_pred             ----------C---CCCc-------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcccc
Q psy18060        334 ----------V---TFPS-------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNLS  376 (549)
Q Consensus       334 ----------~---~~p~-------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~  376 (549)
                                +   ++|.             .-.+++.+|+.++|..||.+|+.+.++++|.||.....
T Consensus       255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence                      0   1111             01457889999999999999999999999999975443


No 369
>KOG0587|consensus
Probab=100.00  E-value=3.1e-38  Score=342.31  Aligned_cols=258  Identities=32%  Similarity=0.543  Sum_probs=225.8

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEe----
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHE----  188 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~----  188 (549)
                      .....+.|++...||.|.+|.||++.++++++..|+|+......   ....++.|.+|++.+ .|||++.+|++|.    
T Consensus        14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~   90 (953)
T KOG0587|consen   14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP   90 (953)
T ss_pred             CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence            34445679999999999999999999999999999999875432   335667888999888 6999999999884    


Q ss_pred             -eCCEEEEEEecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        189 -TLNEFVLITEFAH-MSLSNLLEQ--RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       189 -~~~~~~iV~E~~~-gsL~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                       .++.+|||||||+ ||.-++++.  ..++.|..+..|++.++.||.+||++.++|||||=.|||++.+|.|||+|||.+
T Consensus        91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvS  170 (953)
T KOG0587|consen   91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVS  170 (953)
T ss_pred             CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeee
Confidence             3568999999999 588888765  467899999999999999999999999999999999999999999999999999


Q ss_pred             eecccCcccccccCCCCcccccccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---C
Q psy18060        265 RSMAVGTHMLTSIKGTPLYMAPELIAE-----RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT---F  336 (549)
Q Consensus       265 ~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~---~  336 (549)
                      ..........++.+|||+|||||++..     ..|+..+|+||||++..||.-|.+|+-..-+...+-.|...+++   -
T Consensus       171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkr  250 (953)
T KOG0587|consen  171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKR  250 (953)
T ss_pred             eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccc
Confidence            988777677788899999999999843     45888999999999999999999999988888777766555432   3


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      |..|++++.+||..||.+|..+||+..++|+|||++..
T Consensus       251 p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  251 PKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             hhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence            56799999999999999999999999999999999854


No 370
>KOG1095|consensus
Probab=100.00  E-value=5.2e-38  Score=353.13  Aligned_cols=249  Identities=24%  Similarity=0.415  Sum_probs=217.6

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCc-----eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKK-----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      -..-.+.+.||+|.||.||.|.......     .||+|.+.+. .+......|.+|..+|+.++|||||+++|++-+...
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            3456788999999999999998765443     3999998654 345667899999999999999999999999988999


Q ss_pred             EEEEEecCC-CCHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        193 FVLITEFAH-MSLSNLLEQR-------KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~-------~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                      .+|++|||. |+|..+|++.       ..++..+...++.||++|.+||+++++|||||..+|+||+....|||+|||+|
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence            999999987 6999999875       34889999999999999999999999999999999999999999999999999


Q ss_pred             eecccCcccccccC--CCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHH-HHhcCCCCCCccC
Q psy18060        265 RSMAVGTHMLTSIK--GTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIR-LLKTQDVTFPSQV  340 (549)
Q Consensus       265 ~~~~~~~~~~~~~~--GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~-~i~~~~~~~p~~~  340 (549)
                      +.+-..........  -...|||||.+..+.++.|+|||||||+|||++| |..||...+..++.. ....++++.|+.+
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~C  929 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYC  929 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCC
Confidence            95543322222211  2357999999999999999999999999999998 999999999888887 5666778889999


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      |..+.++|..||+.+|++||++..|++
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            999999999999999999999999987


No 371
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00  E-value=1.2e-37  Score=313.31  Aligned_cols=248  Identities=27%  Similarity=0.434  Sum_probs=204.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEc----CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEee--CCE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHL----DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET--LNE  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~--~~~  192 (549)
                      ..|++.+.||+|+||.||+|...    .++..+|+|.+...... .....+.+|+++++.+.||||+++++++..  ...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~   82 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS   82 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence            46788899999999999999864    34789999999765433 345688999999999999999999998876  567


Q ss_pred             EEEEEecCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG  270 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~  270 (549)
                      .+++|||+. ++|.+++.... .+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++......
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED  162 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence            899999997 58999997754 6899999999999999999999999999999999999999999999999999876532


Q ss_pred             ccc---ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---------------HHHHHHhcC
Q psy18060        271 THM---LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL---------------HLIRLLKTQ  332 (549)
Q Consensus       271 ~~~---~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~---------------~~~~~i~~~  332 (549)
                      ...   .....++..|+|||.+.+..++.++|||||||++++|++|..||......               .....+...
T Consensus       163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05038         163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG  242 (284)
T ss_pred             CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence            211   11234566799999998888999999999999999999999998653221               122222222


Q ss_pred             -CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        333 -DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       333 -~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                       ....|..++.++.+++.+||..+|.+|||+.|++.
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             22344567899999999999999999999999875


No 372
>KOG1006|consensus
Probab=100.00  E-value=1.6e-39  Score=311.18  Aligned_cols=256  Identities=30%  Similarity=0.476  Sum_probs=211.8

Q ss_pred             eEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHH-HHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        122 QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEI-QKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       122 ~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~i-l~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      +-+..||.|+||+|++-.++.+|+..|||.++.... .++...++.|... ++.-++||||++|+.....+..||.||++
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM  145 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence            345679999999999999999999999999976544 4556677777775 45558999999999988888889999999


Q ss_pred             CCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        201 HMSLSNLLE-----QRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       201 ~gsL~~~l~-----~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      .-||..+.+     +...++|..+..|....+.||+||... .|||||+||+|||++..|.|||||||++..+..+ -..
T Consensus       146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-iAk  224 (361)
T KOG1006|consen  146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-IAK  224 (361)
T ss_pred             hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-HHh
Confidence            987665543     356799999999999999999999764 8999999999999999999999999998765433 223


Q ss_pred             cccCCCCcccccccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCCC---CCc---cCCHHHH
Q psy18060        275 TSIKGTPLYMAPELIAE--RPYDHTADLWSLGCIAYEIHMGHPPFKTVS-ILHLIRLLKTQDVT---FPS---QVSETYK  345 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~--~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-~~~~~~~i~~~~~~---~p~---~~s~~~~  345 (549)
                      +.-.|-..|||||.+..  ..|+.++|+||||++|||+.||..|+...+ ..+.+..+..+.++   ++.   .++..+.
T Consensus       225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~  304 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMV  304 (361)
T ss_pred             hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHH
Confidence            44578899999999943  459999999999999999999999998764 44555556666543   222   3789999


Q ss_pred             HHHHHhchhCcCCCCCHHHHhcCcccCcccchhh
Q psy18060        346 DLVKGLLEKDASQRLSWPELLHHPLVKDNLSSEI  379 (549)
Q Consensus       346 dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~~  379 (549)
                      .||+-||.+|-..||+..+++++||.+.......
T Consensus       305 ~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~  338 (361)
T KOG1006|consen  305 RFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGP  338 (361)
T ss_pred             HHHHHHhhcccccCcchhhhhcCchhhhhhhcCC
Confidence            9999999999999999999999999987654433


No 373
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00  E-value=5.4e-37  Score=307.81  Aligned_cols=240  Identities=20%  Similarity=0.318  Sum_probs=191.6

Q ss_pred             EEecCCcEEEEEEEEcCCC--ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-C
Q psy18060        126 LIGEGSFGKVFKAIHLDLK--KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-M  202 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~--~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-g  202 (549)
                      .||+|+||.||++.....+  ..+++|.+.... .......+.+|+.+++.++||||+++++.+......++||||+. |
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            5899999999999754332  345666654432 23445678999999999999999999999999999999999998 5


Q ss_pred             CHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc--ccccc
Q psy18060        203 SLSNLLEQR----KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT--HMLTS  276 (549)
Q Consensus       203 sL~~~l~~~----~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~--~~~~~  276 (549)
                      +|.+++.+.    ..+++..+..++.||+.||+|||+.|++||||||+|||++.++.++|+|||++.......  .....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999999764    346777888999999999999999999999999999999999999999999986432211  11234


Q ss_pred             cCCCCcccccccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC------CCCCccCCH
Q psy18060        277 IKGTPLYMAPELIAE-------RPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD------VTFPSQVSE  342 (549)
Q Consensus       277 ~~GT~~Y~APE~l~~-------~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~  342 (549)
                      ..|++.|+|||++..       ..++.++|||||||++|||++ |..||...+..+....+....      ..++..+++
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE  240 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence            568899999999743       345789999999999999997 678998777766665543321      223345789


Q ss_pred             HHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        343 TYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       343 ~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+.+++..|| .+|.+||++++|++
T Consensus       241 ~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         241 RWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHHh-hCcccCCCHHHHHH
Confidence            9999999999 68999999999864


No 374
>KOG0671|consensus
Probab=100.00  E-value=9.1e-39  Score=319.94  Aligned_cols=254  Identities=26%  Similarity=0.430  Sum_probs=210.0

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC--CCC----eeEEEEEEe
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA--HPN----IIKFIASHE  188 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~--hpn----Iv~l~~~~~  188 (549)
                      .....+|.++..+|+|.||.|-+|.+..++..+|+|+++..   .+..++.+-|+++++++.  .|+    +|++.+||.
T Consensus        85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd  161 (415)
T KOG0671|consen   85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD  161 (415)
T ss_pred             cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence            33468899999999999999999999999999999999653   233456677899999983  232    688889999


Q ss_pred             eCCEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec--------------
Q psy18060        189 TLNEFVLITEFAHMSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK--------------  252 (549)
Q Consensus       189 ~~~~~~iV~E~~~gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~--------------  252 (549)
                      -.++.+||+|.++-|+.+.+..++  +++...++.++.||+.++++||+.+++|-||||+|||+.+              
T Consensus       162 yrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~  241 (415)
T KOG0671|consen  162 YRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC  241 (415)
T ss_pred             ccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence            999999999999989999998864  6899999999999999999999999999999999999943              


Q ss_pred             ------CCcEEEeecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--
Q psy18060        253 ------DGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILH--  324 (549)
Q Consensus       253 ------~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~--  324 (549)
                            +..|+++|||.|+....   ..++.+.|..|+|||++.+-+++.++||||+||||+||+||...|++.+..+  
T Consensus       242 ~~r~~ks~~I~vIDFGsAtf~~e---~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL  318 (415)
T KOG0671|consen  242 FIRPLKSTAIKVIDFGSATFDHE---HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL  318 (415)
T ss_pred             eeccCCCcceEEEecCCcceecc---CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHH
Confidence                  22589999999976542   2367789999999999999999999999999999999999999999877444  


Q ss_pred             -HHHHHhcC------------------CCCCCcc-------------------------CCHHHHHHHHHhchhCcCCCC
Q psy18060        325 -LIRLLKTQ------------------DVTFPSQ-------------------------VSETYKDLVKGLLEKDASQRL  360 (549)
Q Consensus       325 -~~~~i~~~------------------~~~~p~~-------------------------~s~~~~dlI~~~L~~dP~~Rp  360 (549)
                       ..++|...                  .+..|..                         .-.++.|||++||..||.+|+
T Consensus       319 aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri  398 (415)
T KOG0671|consen  319 AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRI  398 (415)
T ss_pred             HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccc
Confidence             33333211                  1111110                         112467999999999999999


Q ss_pred             CHHHHhcCcccCcc
Q psy18060        361 SWPELLHHPLVKDN  374 (549)
Q Consensus       361 s~~elL~Hpw~~~~  374 (549)
                      |+.|+|.||||+..
T Consensus       399 Tl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  399 TLREALSHPFFARL  412 (415)
T ss_pred             cHHHHhcCHHhhcC
Confidence            99999999999753


No 375
>KOG1151|consensus
Probab=100.00  E-value=1.8e-38  Score=321.02  Aligned_cols=259  Identities=29%  Similarity=0.482  Sum_probs=217.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHH-----HHHHHHHHHHHHhcCCCCeeEEEEEEe-eC
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE-----LSSLKQECEIQKHLAHPNIIKFIASHE-TL  190 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~-----~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~  190 (549)
                      ..++|-++..||+|||+.||++.+....+.||+|+-........+     .....+|..|.+.|.||.||++|++|. +.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            346799999999999999999999999999999997554432222     345668999999999999999999985 55


Q ss_pred             CEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CCccccccCCcEEEec---CCcEEEeecccc
Q psy18060        191 NEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSN--RVLHRDLKPQNVLLNK---DGVAMLCDFGFA  264 (549)
Q Consensus       191 ~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~--gIiHrDIKP~NILl~~---~g~vKL~DFGla  264 (549)
                      +.++-|+|||+| +|.-+|++++-++|.+++.|+.||+.||.||.+.  .|||-||||.|||+-.   -|.+||+|||++
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS  620 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS  620 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence            678999999998 7999999999999999999999999999999976  6999999999999954   378999999999


Q ss_pred             eecccCcc-------cccccCCCCccccccccc----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHH---HH
Q psy18060        265 RSMAVGTH-------MLTSIKGTPLYMAPELIA----ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSIL-HLIR---LL  329 (549)
Q Consensus       265 ~~~~~~~~-------~~~~~~GT~~Y~APE~l~----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~-~~~~---~i  329 (549)
                      +.+..+..       ......||.||++||.+.    ..+.+.|+||||+|||+|.++.|+.||...... .+++   .+
T Consensus       621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIl  700 (775)
T KOG1151|consen  621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTIL  700 (775)
T ss_pred             hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchh
Confidence            98865432       234568999999999984    345789999999999999999999999765432 2222   23


Q ss_pred             hcCCCCCC--ccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCccc
Q psy18060        330 KTQDVTFP--SQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDNL  375 (549)
Q Consensus       330 ~~~~~~~p--~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~~  375 (549)
                      ....+.||  +.++.++++||++||+...++|..+.++..||+|....
T Consensus       701 kAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~  748 (775)
T KOG1151|consen  701 KATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI  748 (775)
T ss_pred             cceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence            44455666  56999999999999999999999999999999997643


No 376
>KOG0665|consensus
Probab=100.00  E-value=1.6e-37  Score=304.74  Aligned_cols=253  Identities=28%  Similarity=0.449  Sum_probs=216.3

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC----
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN----  191 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~----  191 (549)
                      ....+|.-++.+|.|.- .|.-+.+.-+++.||+|.+.....+........+|...+..++|+||++++.+|....    
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~   92 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE   92 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence            34567888999999999 7888889899999999998776555555667789999999999999999999985543    


Q ss_pred             --EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceeccc
Q psy18060        192 --EFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV  269 (549)
Q Consensus       192 --~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~  269 (549)
                        .+|+|||++..+|...+.  ..++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||+|+....
T Consensus        93 ~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~  170 (369)
T KOG0665|consen   93 FQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT  170 (369)
T ss_pred             HHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc
Confidence              579999999999999987  5678888999999999999999999999999999999999999999999999987665


Q ss_pred             CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC----------------
Q psy18060        270 GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQD----------------  333 (549)
Q Consensus       270 ~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~----------------  333 (549)
                      . -..+..+.|.+|+|||++.+..|...+||||+||++.||++|+..|++.+..+...++...-                
T Consensus       171 ~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r  249 (369)
T KOG0665|consen  171 D-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR  249 (369)
T ss_pred             c-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence            4 45677889999999999999889999999999999999999999999877665554442110                


Q ss_pred             -----------C----CCCc-----------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccC
Q psy18060        334 -----------V----TFPS-----------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       334 -----------~----~~p~-----------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                                 .    .+|+           .-+..+++++.+||..||++|.|++++|+|||++
T Consensus       250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                       0    1121           1234678999999999999999999999999998


No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00  E-value=4.4e-36  Score=292.43  Aligned_cols=239  Identities=41%  Similarity=0.683  Sum_probs=210.3

Q ss_pred             CcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCCC-CHHHHHH
Q psy18060        131 SFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHM-SLSNLLE  209 (549)
Q Consensus       131 ~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~g-sL~~~l~  209 (549)
                      +||.||+|....+++.+|+|++........ ...+.+|++.+++++||||+++++.+......++++|++++ +|.+++.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            589999999998899999999876443221 57889999999999999999999999988999999999986 9999998


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCcccccccc
Q psy18060        210 QRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELI  289 (549)
Q Consensus       210 ~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l  289 (549)
                      ....+++..+..++.+++.||.|||+.|++|+||+|.||+++.++.++|+|||.+....... ......|+..|+|||.+
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~  158 (244)
T smart00220       80 KRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVL  158 (244)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHH
Confidence            87779999999999999999999999999999999999999999999999999998765432 33455689999999999


Q ss_pred             cCCCCCcchhhHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhcCCCCCCcc---CCHHHHHHHHHhchhCcCCCCCHHHH
Q psy18060        290 AERPYDHTADLWSLGCIAYEIHMGHPPFKT-VSILHLIRLLKTQDVTFPSQ---VSETYKDLVKGLLEKDASQRLSWPEL  365 (549)
Q Consensus       290 ~~~~y~~ksDIwSlGvil~eLltG~~Pf~~-~~~~~~~~~i~~~~~~~p~~---~s~~~~dlI~~~L~~dP~~Rps~~el  365 (549)
                      .+..++.++||||||+++++|++|..||.. .........+.......+..   ++.++.+++.+||..+|.+||++.++
T Consensus       159 ~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~  238 (244)
T smart00220      159 LGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEA  238 (244)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHH
Confidence            888899999999999999999999999988 66666666666555443333   88999999999999999999999999


Q ss_pred             hcCccc
Q psy18060        366 LHHPLV  371 (549)
Q Consensus       366 L~Hpw~  371 (549)
                      ++||||
T Consensus       239 ~~~~~~  244 (244)
T smart00220      239 LQHPFF  244 (244)
T ss_pred             hhCCCC
Confidence            999997


No 378
>KOG4250|consensus
Probab=100.00  E-value=2.3e-37  Score=330.19  Aligned_cols=240  Identities=33%  Similarity=0.510  Sum_probs=197.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC------E
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN------E  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~------~  192 (549)
                      ..|..-+.||+|+||.||+++++.+|..||||.+.+.. .....+...+|++++++++|||||++.++-++..      .
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~   91 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL   91 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence            44667788999999999999999999999999997754 3345677889999999999999999998865543      4


Q ss_pred             EEEEEecCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC--C--cEEEeecccc
Q psy18060        193 FVLITEFAH-MSLSNLLEQ---RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD--G--VAMLCDFGFA  264 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~---~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~--g--~vKL~DFGla  264 (549)
                      ..++||||. |||+..+++   ..+++|.+...++..+..||.|||++||+||||||.||++-..  |  .-||+|||.|
T Consensus        92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            679999998 699999975   4579999999999999999999999999999999999999533  3  5799999999


Q ss_pred             eecccCcccccccCCCCccccccccc-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcC-------
Q psy18060        265 RSMAVGTHMLTSIKGTPLYMAPELIA-ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI----LHLIRLLKTQ-------  332 (549)
Q Consensus       265 ~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~----~~~~~~i~~~-------  332 (549)
                      +....+. ..++.+||+.|.+||++. .+.|+..+|.|||||++|++.||..||.....    .++.-.+.++       
T Consensus       172 rel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i  250 (732)
T KOG4250|consen  172 RELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI  250 (732)
T ss_pred             ccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence            9887664 678999999999999998 48899999999999999999999999954321    2233222221       


Q ss_pred             --------------CCCCCccCCHH----HHHHHHHhchhCcCCCC
Q psy18060        333 --------------DVTFPSQVSET----YKDLVKGLLEKDASQRL  360 (549)
Q Consensus       333 --------------~~~~p~~~s~~----~~dlI~~~L~~dP~~Rp  360 (549)
                                    .+++|..+++.    +...+..+|..+|.+|.
T Consensus       251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                          12334444443    34678889999999998


No 379
>KOG4257|consensus
Probab=100.00  E-value=1.8e-36  Score=317.01  Aligned_cols=242  Identities=28%  Similarity=0.431  Sum_probs=207.0

Q ss_pred             EEEEEecCCcEEEEEEEEcCC----CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        123 KICLIGEGSFGKVFKAIHLDL----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       123 ~~~~iG~G~fg~Vy~~~~~~~----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +.+.||.|.||.||+|.....    +-.||||.-+.. ......+.|.+|.-+|++++||||++++|++.+ ...+||||
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmE  470 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVME  470 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEe
Confidence            345799999999999976433    235888887553 334446789999999999999999999999975 46899999


Q ss_pred             cCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccc
Q psy18060        199 FAH-MSLSNLLEQRK-KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTS  276 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~  276 (549)
                      ++. |.|+.+|+.++ .++......++.||+.||.|||+.++|||||...|||+.....|||+|||++|.+........+
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence            998 88999998764 5899999999999999999999999999999999999999999999999999988755433222


Q ss_pred             -cCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhch
Q psy18060        277 -IKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLLE  353 (549)
Q Consensus       277 -~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~  353 (549)
                       ..-..-|||||-+.-..++.++|||-|||++||++. |..||.+....+.+-.|.++ +++.|+++|+.+..++.+||.
T Consensus       551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWa  630 (974)
T KOG4257|consen  551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWA  630 (974)
T ss_pred             ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhc
Confidence             122456999999999999999999999999999885 99999998888887777666 467889999999999999999


Q ss_pred             hCcCCCCCHHHHh
Q psy18060        354 KDASQRLSWPELL  366 (549)
Q Consensus       354 ~dP~~Rps~~elL  366 (549)
                      .+|.+||++.|+.
T Consensus       631 yeP~kRPrftei~  643 (974)
T KOG4257|consen  631 YEPSKRPRFTEIK  643 (974)
T ss_pred             cCcccCCcHHHHH
Confidence            9999999987653


No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00  E-value=8.8e-36  Score=329.17  Aligned_cols=254  Identities=23%  Similarity=0.326  Sum_probs=178.4

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCC----CceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEE-----
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDL----KKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIAS-----  186 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~----~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----  186 (549)
                      ...++|++.+.||+|+||.||+|.+..+    +..||+|.+......    ....++  .++...+.+++.+...     
T Consensus       129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~~~~~~~~~~~~~~~~  202 (566)
T PLN03225        129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRACPNSCADFVYGFLEPV  202 (566)
T ss_pred             CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence            3567899999999999999999999998    899999987643211    111111  1112222222222211     


Q ss_pred             -EeeCCEEEEEEecCC-CCHHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q psy18060        187 -HETLNEFVLITEFAH-MSLSNLLEQRKK--------------------LSETICVQILSNLISALYYLHSNRVLHRDLK  244 (549)
Q Consensus       187 -~~~~~~~~iV~E~~~-gsL~~~l~~~~~--------------------l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIK  244 (549)
                       .......++||||++ ++|.+++.....                    ..+..+..++.||+.||.|||++||+|||||
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence             245567899999998 589998875421                    1234467899999999999999999999999


Q ss_pred             CCcEEEec-CCcEEEeecccceecccCc-ccccccCCCCcccccccccCC----------------------CCCcchhh
Q psy18060        245 PQNVLLNK-DGVAMLCDFGFARSMAVGT-HMLTSIKGTPLYMAPELIAER----------------------PYDHTADL  300 (549)
Q Consensus       245 P~NILl~~-~g~vKL~DFGla~~~~~~~-~~~~~~~GT~~Y~APE~l~~~----------------------~y~~ksDI  300 (549)
                      |+|||++. ++.+||+|||+|+....+. .......||+.|||||++...                      .++.++||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            99999986 5899999999998654322 233556899999999976322                      24456799


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------CC----------ccCCHHHHHHHHHhchhCcCCC
Q psy18060        301 WSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-----------FP----------SQVSETYKDLVKGLLEKDASQR  359 (549)
Q Consensus       301 wSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-----------~p----------~~~s~~~~dlI~~~L~~dP~~R  359 (549)
                      |||||++|||+++..|+... .......+......           .+          ...+....+||.+||++||.+|
T Consensus       363 wSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR  441 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR  441 (566)
T ss_pred             HHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence            99999999999977665432 11111112111110           00          1123345689999999999999


Q ss_pred             CCHHHHhcCcccCcccc
Q psy18060        360 LSWPELLHHPLVKDNLS  376 (549)
Q Consensus       360 ps~~elL~Hpw~~~~~~  376 (549)
                      ||+.|+|+||||.....
T Consensus       442 ~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        442 ISAKAALAHPYFDREGL  458 (566)
T ss_pred             CCHHHHhCCcCcCCCCc
Confidence            99999999999986543


No 381
>KOG0670|consensus
Probab=100.00  E-value=5.6e-37  Score=315.57  Aligned_cols=250  Identities=28%  Similarity=0.462  Sum_probs=213.6

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC------CCCeeEEEEEEeeCCE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA------HPNIIKFIASHETLNE  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~l~~~~~~~~~  192 (549)
                      .+|.+....|+|-|++|..|.+...|+.||||+|....   -....=+.|++||++|+      --|+++++..|...++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            67899999999999999999999999999999997643   22344578999999995      2378999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceecc
Q psy18060        193 FVLITEFAHMSLSNLLEQRK---KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMA  268 (549)
Q Consensus       193 ~~iV~E~~~gsL~~~l~~~~---~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~  268 (549)
                      +|||+|.+..+|.++|++.+   .+....++.++.|+..||..|...||+|.||||.|||+++. ..+||||||.|...+
T Consensus       509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFAS  588 (752)
T ss_pred             eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccc
Confidence            99999999999999999854   58888999999999999999999999999999999999876 578999999997665


Q ss_pred             cCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc----------
Q psy18060        269 VGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS----------  338 (549)
Q Consensus       269 ~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~----------  338 (549)
                      ..  ..+.+.-+.+|.|||++.|-+|+...|+||+||+||||+||+..|++.+..++++........+|.          
T Consensus       589 en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~d  666 (752)
T KOG0670|consen  589 EN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKD  666 (752)
T ss_pred             cc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhh
Confidence            33  334455677899999999999999999999999999999999999999888887765332222221          


Q ss_pred             --------------------------------------------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        339 --------------------------------------------------QVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       339 --------------------------------------------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                                                                        .+-..+++|+.+||..||++|.|+.|+|.|
T Consensus       667 qHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  667 QHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             hhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence                                                              012457899999999999999999999999


Q ss_pred             cccCc
Q psy18060        369 PLVKD  373 (549)
Q Consensus       369 pw~~~  373 (549)
                      |||+.
T Consensus       747 pFi~~  751 (752)
T KOG0670|consen  747 PFITE  751 (752)
T ss_pred             CcccC
Confidence            99964


No 382
>KOG4278|consensus
Probab=100.00  E-value=6.5e-36  Score=312.19  Aligned_cols=242  Identities=24%  Similarity=0.462  Sum_probs=216.6

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      ..+-.+||.|.||.||.|.+++-...||||.++..   ..+...|+.|+.+|+.++|||+|++.++|...-.+|||+||+
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            45567899999999999999999999999998643   356788999999999999999999999999999999999997


Q ss_pred             C-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccccc
Q psy18060        201 H-MSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSI  277 (549)
Q Consensus       201 ~-gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~  277 (549)
                      . |+|.++|+.-  ..++.-...+++.||..|+.||..+++|||||...|.|+.++..||++|||+++.+..++  .+..
T Consensus       346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT--YTAH  423 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT--YTAH  423 (1157)
T ss_pred             cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc--eecc
Confidence            6 8999999863  457888889999999999999999999999999999999999999999999999987654  3444


Q ss_pred             CC---CCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHHHHHhc
Q psy18060        278 KG---TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDLVKGLL  352 (549)
Q Consensus       278 ~G---T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dlI~~~L  352 (549)
                      .|   ..-|.|||-+....++.|+|||+|||+|||+.| |..||++.+..+++..+..+ +..-|..+++...+|++.||
T Consensus       424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW  503 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACW  503 (1157)
T ss_pred             cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence            45   455999999998899999999999999999998 99999999999999888665 45678899999999999999


Q ss_pred             hhCcCCCCCHHHHhc
Q psy18060        353 EKDASQRLSWPELLH  367 (549)
Q Consensus       353 ~~dP~~Rps~~elL~  367 (549)
                      +..|.+||++.|+-+
T Consensus       504 ~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  504 NWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             cCCcccCccHHHHHH
Confidence            999999999988743


No 383
>KOG1290|consensus
Probab=100.00  E-value=2.9e-35  Score=301.81  Aligned_cols=253  Identities=24%  Similarity=0.388  Sum_probs=200.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-----C---CCeeEEEEEEe--
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-----H---PNIIKFIASHE--  188 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-----h---pnIv~l~~~~~--  188 (549)
                      .+|.+.++||.|.|++||+|.+..+.+.||+|+.+...   .-.+....||++|++++     |   .+||++++.|.  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            68999999999999999999999999999999986432   33456788999999883     3   36999999885  


Q ss_pred             --eCCEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecC----------
Q psy18060        189 --TLNEFVLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKD----------  253 (549)
Q Consensus       189 --~~~~~~iV~E~~~gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~----------  253 (549)
                        ++.++++|+|+++.+|..+|...  +.++...+++|++||+.||.|||.+ ||||-||||+|||+..+          
T Consensus       155 GpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~~  234 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDARE  234 (590)
T ss_pred             CCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhhh
Confidence              45689999999999999999864  6799999999999999999999986 99999999999999320          


Q ss_pred             --------------------------------------------------------------------------------
Q psy18060        254 --------------------------------------------------------------------------------  253 (549)
Q Consensus       254 --------------------------------------------------------------------------------  253 (549)
                                                                                                      
T Consensus       235 a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~  314 (590)
T KOG1290|consen  235 AGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNES  314 (590)
T ss_pred             hccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------------------------------------------CcEE
Q psy18060        254 ----------------------------------------------------------------------------GVAM  257 (549)
Q Consensus       254 ----------------------------------------------------------------------------g~vK  257 (549)
                                                                                                  -.||
T Consensus       315 ~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vK  394 (590)
T KOG1290|consen  315 TVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVK  394 (590)
T ss_pred             chhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEE
Confidence                                                                                        0145


Q ss_pred             EeecccceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-------HH---HHHH
Q psy18060        258 LCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-------IL---HLIR  327 (549)
Q Consensus       258 L~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-------~~---~~~~  327 (549)
                      |+|||-|+-..   ...|.-..|..|+|||++.+..|+..+||||++|++|||+||.+.|...+       ..   .+++
T Consensus       395 IaDlGNACW~~---khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~E  471 (590)
T KOG1290|consen  395 IADLGNACWVH---KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIME  471 (590)
T ss_pred             Eeeccchhhhh---hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHH
Confidence            55555554322   22344567899999999999999999999999999999999999996532       11   1222


Q ss_pred             HHh--------cC------------------------------CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCc
Q psy18060        328 LLK--------TQ------------------------------DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHP  369 (549)
Q Consensus       328 ~i~--------~~------------------------------~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hp  369 (549)
                      .+-        .+                              .+.+|..-..++.+|+.-||+.+|++||||.++|+||
T Consensus       472 LLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hP  551 (590)
T KOG1290|consen  472 LLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHP  551 (590)
T ss_pred             HHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCc
Confidence            110        01                              1112222345678999999999999999999999999


Q ss_pred             ccCcccch
Q psy18060        370 LVKDNLSS  377 (549)
Q Consensus       370 w~~~~~~~  377 (549)
                      |+.....+
T Consensus       552 wLn~~~~~  559 (590)
T KOG1290|consen  552 WLNPVAGP  559 (590)
T ss_pred             cccCCCCC
Confidence            99876553


No 384
>KOG0196|consensus
Probab=100.00  E-value=3.3e-36  Score=322.38  Aligned_cols=265  Identities=26%  Similarity=0.431  Sum_probs=228.7

Q ss_pred             ccCCCccccccccccc---------cceeEEEEEecCCcEEEEEEEEcCCCc---eEEEEEEecCCCChHHHHHHHHHHH
Q psy18060        103 HNHCQPVKMEKSNGAL---------EKYQKICLIGEGSFGKVFKAIHLDLKK---TVALKIISKSGRSGKELSSLKQECE  170 (549)
Q Consensus       103 ~~~~~~~~~~~~~~~~---------~~y~~~~~iG~G~fg~Vy~~~~~~~~~---~vAvK~i~~~~~~~~~~~~~~~Ei~  170 (549)
                      +....|...++.+...         ....+.++||.|.||.|++|+.+..++   .||||.++. ....+....|+.|+.
T Consensus       604 k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EAs  682 (996)
T KOG0196|consen  604 KTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEAS  682 (996)
T ss_pred             eeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhhh
Confidence            3344555555444333         445788999999999999999887764   599999854 456677789999999


Q ss_pred             HHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcE
Q psy18060        171 IQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNV  248 (549)
Q Consensus       171 il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NI  248 (549)
                      ||.++.||||+++-++......+.||+|||. |+|..+|+++ +.|+..++.-+++.|+.|++||-++|+|||||...||
T Consensus       683 IMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNI  762 (996)
T KOG0196|consen  683 IMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNI  762 (996)
T ss_pred             hcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhe
Confidence            9999999999999999999999999999997 8999999876 6799999999999999999999999999999999999


Q ss_pred             EEecCCcEEEeecccceecccCccc-ccccCC--CCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHH
Q psy18060        249 LLNKDGVAMLCDFGFARSMAVGTHM-LTSIKG--TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILH  324 (549)
Q Consensus       249 Ll~~~g~vKL~DFGla~~~~~~~~~-~~~~~G--T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~  324 (549)
                      |++.+-.+|++|||++|....+... .++.-|  ..+|.|||.+..++++.++||||+|+++||.++ |..||...+..+
T Consensus       763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd  842 (996)
T KOG0196|consen  763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD  842 (996)
T ss_pred             eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence            9999999999999999987654422 233323  467999999999999999999999999999775 999999999999


Q ss_pred             HHHHHhcC-CCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        325 LIRLLKTQ-DVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       325 ~~~~i~~~-~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .++.|..+ +++.|..+|..+.+|+..||++|-..||++.||+.+
T Consensus       843 VIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  843 VIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence            99998766 455667899999999999999999999999999865


No 385
>KOG0199|consensus
Probab=100.00  E-value=1.3e-35  Score=314.11  Aligned_cols=253  Identities=23%  Similarity=0.416  Sum_probs=217.4

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCC-c--eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLK-K--TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~-~--~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i  195 (549)
                      +...+.+.||+|.||.|++|.+...+ +  .||||.+....... ....|.+|+.+|.+|+|||++++|++.-+ ..+.+
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            34567789999999999999886543 2  58999997655443 67889999999999999999999999876 67889


Q ss_pred             EEecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc
Q psy18060        196 ITEFAH-MSLSNLLEQ--RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH  272 (549)
Q Consensus       196 V~E~~~-gsL~~~l~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~  272 (549)
                      |||++. |+|.+.|.+  +..|.......++.||+.|+.||.++++|||||...|+|+-....|||||||+.+.++.+..
T Consensus       188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned  267 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED  267 (1039)
T ss_pred             HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence            999998 799999987  34588888899999999999999999999999999999999999999999999998876543


Q ss_pred             ccc---ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCccCCHHHHHH
Q psy18060        273 MLT---SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQVSETYKDL  347 (549)
Q Consensus       273 ~~~---~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl  347 (549)
                      ...   ...-...|+|||.+...+++.++|||++||++|||+| |..||.+....+++++|..+ .++.|+.+|+.+.++
T Consensus       268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~i  347 (1039)
T KOG0199|consen  268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQI  347 (1039)
T ss_pred             ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHH
Confidence            321   1223456999999999999999999999999999997 89999999999999998754 356778999999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      +..||+.+|++|||+..|...-++..
T Consensus       348 mk~cWah~paDRptFsair~~~~l~e  373 (1039)
T KOG0199|consen  348 MKNCWAHNPADRPTFSAIREDLVLAE  373 (1039)
T ss_pred             HHHhccCCccccccHHHHHHhHHHHh
Confidence            99999999999999988865544443


No 386
>KOG0664|consensus
Probab=100.00  E-value=2.9e-37  Score=296.40  Aligned_cols=253  Identities=27%  Similarity=0.450  Sum_probs=213.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCC-----EEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----EFVL  195 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~i  195 (549)
                      .+-.+.||-|+||.||.+.+..+|+.+|+|.+.....+-..-..+-+|++++..++|.|++...+..+..+     .+|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            34457899999999999999999999999998765544445567789999999999999999887665443     4688


Q ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-ccc
Q psy18060        196 ITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-HML  274 (549)
Q Consensus       196 V~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-~~~  274 (549)
                      ++|++..+|..+|-.-..++...++-++.||+.||+|||+.||.||||||.|+|++.+..+||||||+|+...... ...
T Consensus       135 ~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM  214 (449)
T KOG0664|consen  135 LTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM  214 (449)
T ss_pred             HHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence            9999999999999988899999999999999999999999999999999999999999999999999999876543 223


Q ss_pred             cccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------------
Q psy18060        275 TSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKT----------------------  331 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~----------------------  331 (549)
                      +..+-|-+|+|||++.+ ..|+.++||||+|||+.||+..+..|...++.+.++.|..                      
T Consensus       215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L  294 (449)
T KOG0664|consen  215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL  294 (449)
T ss_pred             HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence            55567899999999977 5699999999999999999999999998888777776632                      


Q ss_pred             -CCCCCCc-----------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        332 -QDVTFPS-----------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       332 -~~~~~p~-----------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                       +....|+           .-..+..+++.++|..||.+|.+.++.+.|+++..
T Consensus       295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e  348 (449)
T KOG0664|consen  295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE  348 (449)
T ss_pred             ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence             1111121           12346778999999999999999999999999864


No 387
>KOG1094|consensus
Probab=100.00  E-value=2.2e-35  Score=307.41  Aligned_cols=246  Identities=23%  Similarity=0.358  Sum_probs=209.8

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      ...+.++||+|-||.|.+|.-.. +..||+|.++... .....+.|.+|+++|.+++|||||.+.++|..++.+++++||
T Consensus       539 ~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a-~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  539 RLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDA-TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             heehhhhhcCcccceeEEEEecC-ceEEEEeecCccc-chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence            34677899999999999998654 6899999997543 344568899999999999999999999999999999999999


Q ss_pred             CC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccc--c
Q psy18060        200 AH-MSLSNLLEQRK--KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHM--L  274 (549)
Q Consensus       200 ~~-gsL~~~l~~~~--~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~--~  274 (549)
                      ++ |+|.+++..+.  .........|+.||+.|++||.+.++|||||.|.|+|++.++++||||||++|.+-.+...  .
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq  696 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ  696 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence            87 89999999873  3345556779999999999999999999999999999999999999999999876544322  1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHH--hCCCCCCCCCHHHHHHHHhc----C----CCCCCccCCHHH
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIH--MGHPPFKTVSILHLIRLLKT----Q----DVTFPSQVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLl--tG~~Pf~~~~~~~~~~~i~~----~----~~~~p~~~s~~~  344 (549)
                      ...+-...|||||.+.-++++.++|+|++|+++||++  +...||...+..+..+....    +    -+..|+.++..+
T Consensus       697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~l  776 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGL  776 (807)
T ss_pred             cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHH
Confidence            2234567899999999999999999999999999987  57899999888887776432    1    234677899999


Q ss_pred             HHHHHHhchhCcCCCCCHHHHhc
Q psy18060        345 KDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       345 ~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .++|.+||.++-.+|||++++..
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHH
Confidence            99999999999999999999854


No 388
>KOG0668|consensus
Probab=100.00  E-value=7.7e-36  Score=280.50  Aligned_cols=250  Identities=26%  Similarity=0.457  Sum_probs=206.0

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeC--CE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETL--NE  192 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~--~~  192 (549)
                      +..++|++.+.+|+|.|+.|+.|.+..+++.++||+++..     ....+.+|++||+.|. ||||+++++...+.  ..
T Consensus        35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            4678899999999999999999999999999999998653     3457899999999997 99999999987554  45


Q ss_pred             EEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceecccC
Q psy18060        193 FVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVG  270 (549)
Q Consensus       193 ~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~~~  270 (549)
                      ..+++|+.+. +...+   ...++...++.++.|++.||.|||++||+|||+||.|++|+.. -.++|+|+|+|....++
T Consensus       110 paLiFE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~  186 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG  186 (338)
T ss_pred             chhHhhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence            6799999875 44433   3468888999999999999999999999999999999999976 47999999999988766


Q ss_pred             cccccccCCCCcccccccccC-CCCCcchhhHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHh-------------cCCCC
Q psy18060        271 THMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCIAYEIHMGHPPFK-TVSILHLIRLLK-------------TQDVT  335 (549)
Q Consensus       271 ~~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvil~eLltG~~Pf~-~~~~~~~~~~i~-------------~~~~~  335 (549)
                      . ..+-.+.+.+|--||.+.. +.|+..-|+|||||++..|++.+.||. +.+..+++.+|.             .-.+.
T Consensus       187 ~-eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  187 K-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             c-eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence            4 3455678899999999865 668999999999999999999999984 333333333221             11111


Q ss_pred             CCc------------------------cCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        336 FPS------------------------QVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       336 ~p~------------------------~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +++                        -+++++.||+.++|..|-+.||||.|++.||||...
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            211                        257999999999999999999999999999999753


No 389
>KOG0576|consensus
Probab=100.00  E-value=9.1e-37  Score=322.14  Aligned_cols=263  Identities=29%  Similarity=0.505  Sum_probs=235.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      -.++|.++..+|+|.||.||+++++.+++..|+|+++...  ....+.+.+|+-+++..+|||||.+++.+-..+.++|+
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep--~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP--GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccC--CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            3467999999999999999999999999999999997643  34456788999999999999999999999999999999


Q ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCccccc
Q psy18060        197 TEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLT  275 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~  275 (549)
                      ||||+ |+|.+.-.--+.++|.++..+++..++||+|||++|=+|||||-.|||+++.|.||++|||.+..++.......
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk  170 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK  170 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence            99999 58999888889999999999999999999999999999999999999999999999999999987766555667


Q ss_pred             ccCCCCcccccccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----ccCCHHHHHH
Q psy18060        276 SIKGTPLYMAPELI---AERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP-----SQVSETYKDL  347 (549)
Q Consensus       276 ~~~GT~~Y~APE~l---~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p-----~~~s~~~~dl  347 (549)
                      ++.|||+|||||+.   ..+.|+..+|||++|+...|+---++|....-+.+......+..+..|     ..+++.+-+|
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~f  250 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNF  250 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHH
Confidence            88999999999986   467799999999999999999988999888888888887777665554     3689999999


Q ss_pred             HHHhchhCcCCCCCHHHHhcCcccCcccchhhhh
Q psy18060        348 VKGLLEKDASQRLSWPELLHHPLVKDNLSSEIES  381 (549)
Q Consensus       348 I~~~L~~dP~~Rps~~elL~Hpw~~~~~~~~~~~  381 (549)
                      ++.+|.++|++|||++-+|+|||+..........
T Consensus       251 vK~altknpKkRptaeklL~h~fvs~~l~~rl~~  284 (829)
T KOG0576|consen  251 VKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAI  284 (829)
T ss_pred             HHHHhcCCCccCCChhhheeceeeccchhhHHHH
Confidence            9999999999999999999999998775544433


No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00  E-value=5.7e-34  Score=308.48  Aligned_cols=259  Identities=23%  Similarity=0.349  Sum_probs=187.9

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEc----------------CCCceEEEEEEecCCCChH------------HHHHHH
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHL----------------DLKKTVALKIISKSGRSGK------------ELSSLK  166 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~----------------~~~~~vAvK~i~~~~~~~~------------~~~~~~  166 (549)
                      ....++|.+.++||+|+||.||+|...                ..++.||||.+........            ......
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            345778999999999999999999752                2346799999864321100            011223


Q ss_pred             HHHHHHHhcCCCCe-----eEEEEEEee--------CCEEEEEEecCC-CCHHHHHHhcC--------------------
Q psy18060        167 QECEIQKHLAHPNI-----IKFIASHET--------LNEFVLITEFAH-MSLSNLLEQRK--------------------  212 (549)
Q Consensus       167 ~Ei~il~~l~hpnI-----v~l~~~~~~--------~~~~~iV~E~~~-gsL~~~l~~~~--------------------  212 (549)
                      .|+.++.+++|.++     +++++++..        ....++||||++ ++|.+++....                    
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            46667777766554     566666532        346799999998 58988886421                    


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc-cccCCCCcccccc
Q psy18060        213 ----KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML-TSIKGTPLYMAPE  287 (549)
Q Consensus       213 ----~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~-~~~~GT~~Y~APE  287 (549)
                          .+++..++.++.|++.||.|||+.||+||||||+|||++.++.+||+|||+++....+.... ....+|+.|+|||
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE  380 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence                23566788999999999999999999999999999999999999999999997654332111 1223589999999


Q ss_pred             cccCCC--------------------CC--cchhhHHHHHHHHHHHhCCC-CCCCCCH-----------HHHHHHHhcCC
Q psy18060        288 LIAERP--------------------YD--HTADLWSLGCIAYEIHMGHP-PFKTVSI-----------LHLIRLLKTQD  333 (549)
Q Consensus       288 ~l~~~~--------------------y~--~ksDIwSlGvil~eLltG~~-Pf~~~~~-----------~~~~~~i~~~~  333 (549)
                      ++....                    |+  .+.||||+||++++|++|.. ||.....           ....+.+....
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            985422                    22  24799999999999999875 7754211           11112222333


Q ss_pred             CCCC--ccCCHHHHHHHHHhchhCc---CCCCCHHHHhcCcccCc
Q psy18060        334 VTFP--SQVSETYKDLVKGLLEKDA---SQRLSWPELLHHPLVKD  373 (549)
Q Consensus       334 ~~~p--~~~s~~~~dlI~~~L~~dP---~~Rps~~elL~Hpw~~~  373 (549)
                      +.++  +..++.+++|+.+||.++|   .+|+|++|+|+||||..
T Consensus       461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            3333  5678999999999999876   68999999999999964


No 391
>KOG1027|consensus
Probab=100.00  E-value=2.5e-35  Score=318.55  Aligned_cols=241  Identities=31%  Similarity=0.488  Sum_probs=197.1

Q ss_pred             EEEecCCcEE-EEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCCC
Q psy18060        125 CLIGEGSFGK-VFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAHM  202 (549)
Q Consensus       125 ~~iG~G~fg~-Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~g  202 (549)
                      +++|.|+-|+ ||+|...  |+.||||++-.     .......+|+..++.- .|||||++|+.-.+....||..|+|..
T Consensus       515 eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~  587 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC  587 (903)
T ss_pred             HHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh
Confidence            5688998885 5899876  78999998854     3345678999998887 699999999999999999999999999


Q ss_pred             CHHHHHHhcC-C---CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec---CC--cEEEeecccceecccCccc
Q psy18060        203 SLSNLLEQRK-K---LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK---DG--VAMLCDFGFARSMAVGTHM  273 (549)
Q Consensus       203 sL~~~l~~~~-~---l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~---~g--~vKL~DFGla~~~~~~~~~  273 (549)
                      +|.++++... .   ......+.++.|++.||++||+.+||||||||.||||+.   ++  .++|+|||+++.+..+...
T Consensus       588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS  667 (903)
T KOG1027|consen  588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS  667 (903)
T ss_pred             hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch
Confidence            9999998741 1   111345788999999999999999999999999999986   34  6899999999988765433


Q ss_pred             ---ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHhcCCCCCC---ccCCHHHHH
Q psy18060        274 ---LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG-HPPFKTVSILHLIRLLKTQDVTFP---SQVSETYKD  346 (549)
Q Consensus       274 ---~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG-~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~d  346 (549)
                         ..+..||-+|+|||++....-+.++|||||||++|..++| ..||...-  +....|.++...+-   +....++.+
T Consensus       668 ~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~~~d~eA~d  745 (903)
T KOG1027|consen  668 FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEPLPDCEAKD  745 (903)
T ss_pred             hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeeccCchHHHHH
Confidence               3456799999999999988888899999999999999985 99996532  22334555544322   111228999


Q ss_pred             HHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        347 LVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ||.+||.++|..||+|.+||.||+|=+.
T Consensus       746 LI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  746 LISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             HHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            9999999999999999999999999654


No 392
>KOG0200|consensus
Probab=100.00  E-value=4.3e-33  Score=310.52  Aligned_cols=246  Identities=29%  Similarity=0.497  Sum_probs=210.7

Q ss_pred             eeEEEEEecCCcEEEEEEEEc---C----CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHL---D----LKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNE  192 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~---~----~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~  192 (549)
                      ..+.+.||+|.||.|++|...   .    ....||||........ .....+..|+++++.+ .||||+.+.+++...+.
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            355669999999999999643   1    1457999998766554 6678899999999998 69999999999999999


Q ss_pred             EEEEEecCC-CCHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCc
Q psy18060        193 FVLITEFAH-MSLSNLLEQRK----------------KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGV  255 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~----------------~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~  255 (549)
                      +++|+||+. |+|.++++.++                .++..+...++.||+.|++||++.++|||||...|||++.+..
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~  456 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKV  456 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCE
Confidence            999999998 89999998766                3888999999999999999999999999999999999999999


Q ss_pred             EEEeecccceecccCcccc-cccCC--CCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHh
Q psy18060        256 AMLCDFGFARSMAVGTHML-TSIKG--TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVS-ILHLIRLLK  330 (549)
Q Consensus       256 vKL~DFGla~~~~~~~~~~-~~~~G--T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~-~~~~~~~i~  330 (549)
                      +||+|||+|+......... ....|  ...|||||.+....|+.++||||+||+|||++| |..||++.. .....+.+.
T Consensus       457 ~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~  536 (609)
T KOG0200|consen  457 IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLK  536 (609)
T ss_pred             EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHh
Confidence            9999999998655433322 22233  334999999999999999999999999999998 899999866 666677777


Q ss_pred             cCC-CCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        331 TQD-VTFPSQVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       331 ~~~-~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .+. ...|..+++++.++++.||..+|.+||++.++..
T Consensus       537 ~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  537 EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            764 4678889999999999999999999999988754


No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00  E-value=2.1e-33  Score=330.31  Aligned_cols=236  Identities=21%  Similarity=0.279  Sum_probs=187.8

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ..+.....||+|+||.||+|.+..++..||+|.+......      ...|++++++++|||||++++++.+.+..++|||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            3456677899999999999999989999999998643221      1346888999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        199 FAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLH---SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      |++ |+|.++++   .+++..+..++.|++.||+|||   +.+|+||||||+||+++.++..+++ ||.+.....    .
T Consensus       764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~  835 (968)
T PLN00113        764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----D  835 (968)
T ss_pred             CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----C
Confidence            997 68999986   4889999999999999999999   6699999999999999998888775 666543321    1


Q ss_pred             cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhc---------CC----CCC
Q psy18060        275 TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS-----ILHLIRLLKT---------QD----VTF  336 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~-----~~~~~~~i~~---------~~----~~~  336 (549)
                      ....||+.|||||++.+..++.++|||||||++|||+||+.||....     .....+....         ..    ...
T Consensus       836 ~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  915 (968)
T PLN00113        836 TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV  915 (968)
T ss_pred             CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc
Confidence            23368999999999999999999999999999999999999985321     1111111100         00    011


Q ss_pred             CccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        337 PSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       337 p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      +.....++.+++.+||+.||.+|||+.|+++.
T Consensus       916 ~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        916 NQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            11123356789999999999999999999765


No 394
>KOG0984|consensus
Probab=100.00  E-value=1.5e-33  Score=261.56  Aligned_cols=211  Identities=27%  Similarity=0.457  Sum_probs=176.6

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHH-HhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQ-KHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il-~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      ...+..||+|++|.|-+.++..+|...|+|.+... .+.+....+.+|+.+. +...+|.+|.||+.......++|.||.
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t-vn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~  126 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT-VNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL  126 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeEEEEeeehhh-cChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence            44567899999999999999999999999999654 3445566778888874 556899999999998888899999999


Q ss_pred             CCCCHHHH----HHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        200 AHMSLSNL----LEQRKKLSETICVQILSNLISALYYLHSN-RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       200 ~~gsL~~~----l~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      +.-||..+    +++.+.++|..+-+|+..++.||.|||++ .+||||+||+||||+.+|.|||||||++..+..+.. .
T Consensus       127 M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA-k  205 (282)
T KOG0984|consen  127 MDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA-K  205 (282)
T ss_pred             hhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH-H
Confidence            99877655    45677899999999999999999999987 899999999999999999999999999976654321 2


Q ss_pred             cccCCCCccccccccc----CCCCCcchhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCC
Q psy18060        275 TSIKGTPLYMAPELIA----ERPYDHTADLWSLGCIAYEIHMGHPPFKTV-SILHLIRLLKTQD  333 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~----~~~y~~ksDIwSlGvil~eLltG~~Pf~~~-~~~~~~~~i~~~~  333 (549)
                      +-..|-..|||||.+.    ...|+.++||||||+++.||.+++.||... ++-+++..+...+
T Consensus       206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP  269 (282)
T ss_pred             HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence            3246788899999984    347999999999999999999999999754 5666666655443


No 395
>KOG1152|consensus
Probab=100.00  E-value=8.8e-34  Score=295.37  Aligned_cols=202  Identities=29%  Similarity=0.487  Sum_probs=179.7

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH------HHHHHHHHHHHHHhcC---CCCeeEEEEE
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK------ELSSLKQECEIQKHLA---HPNIIKFIAS  186 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~------~~~~~~~Ei~il~~l~---hpnIv~l~~~  186 (549)
                      ....+|..++.+|.|+||.|+.|.++.+...|+||.+.+.+.-..      .+-.+-.|++||..++   |+||++++++
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            345679999999999999999999999999999999987653211      1234567999999997   9999999999


Q ss_pred             EeeCCEEEEEEecCC-C-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        187 HETLNEFVLITEFAH-M-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       187 ~~~~~~~~iV~E~~~-g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                      |++.+.+||+||.-+ | +|+++|+....++|.+++.|++|++.|+++||++||||||||-+|+.++.+|.+||+|||.|
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence            999999999999876 4 89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eecccCcccccccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCC
Q psy18060        265 RSMAVGTHMLTSIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMGHPPFKT  319 (549)
Q Consensus       265 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG~~Pf~~  319 (549)
                      .....+  ....++||..|.|||++.+.+|- ..-|||+||++||-+.....||.+
T Consensus       718 a~~ksg--pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  718 AYTKSG--PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhhcCC--CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            766554  34667899999999999998885 568999999999999999999853


No 396
>KOG1025|consensus
Probab=99.97  E-value=6.1e-32  Score=290.50  Aligned_cols=244  Identities=25%  Similarity=0.409  Sum_probs=211.2

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCc----eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEE
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKK----TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      .+..++||+|+||+||+|.+...|+    +||+|++... ...+...++..|+-+|.+++|||++++++++.... +.||
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~-t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF-TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc-CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence            3456789999999999999876665    5888887543 33444578899999999999999999999987665 7889


Q ss_pred             EecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccc
Q psy18060        197 TEFAH-MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHML  274 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~  274 (549)
                      ++|++ |+|.++++.+ ..+..+....|..||++|+.|||.++++||||...|+|+..-..|||.|||+|+...+.....
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            99998 7999999864 568889999999999999999999999999999999999999999999999999887665444


Q ss_pred             cccCC--CCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHH
Q psy18060        275 TSIKG--TPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQD-VTFPSQVSETYKDLVKG  350 (549)
Q Consensus       275 ~~~~G--T~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~dlI~~  350 (549)
                      +...|  .+-|||=|.+....|+.++||||+||++||++| |..|+.+.+..++-..+..+. +.-|+.++.++.-++.+
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVK  935 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHH
Confidence            43333  456999999999999999999999999999997 999999999888888776653 56678999999999999


Q ss_pred             hchhCcCCCCCHHHHh
Q psy18060        351 LLEKDASQRLSWPELL  366 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL  366 (549)
                      ||..|+..||+++++.
T Consensus       936 Cwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELA  951 (1177)
T ss_pred             HhccCcccCccHHHHH
Confidence            9999999999998774


No 397
>KOG3653|consensus
Probab=99.97  E-value=1.1e-31  Score=275.03  Aligned_cols=238  Identities=30%  Similarity=0.458  Sum_probs=189.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHh--cCCCCeeEEEEEEeeCC----
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFIASHETLN----  191 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~~----  191 (549)
                      ....++++.||+|+||.||+|...  ++.||||++..     ...+.+.+|-.|.+.  +.|+||++|++.-....    
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc--CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence            556778899999999999999876  69999999864     455678888888765  58999999998876555    


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------CCccccccCCcEEEecCCcEEEeec
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN---------RVLHRDLKPQNVLLNKDGVAMLCDF  261 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~---------gIiHrDIKP~NILl~~~g~vKL~DF  261 (549)
                      .++||++|-+ |+|.++|+.+ .+++....+++..+++||+|||+.         +|+|||||..|||+..+++..|+||
T Consensus       282 eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            7899999977 8999999864 799999999999999999999974         6999999999999999999999999


Q ss_pred             ccceecccCccc--ccccCCCCcccccccccCCC-CC-----cchhhHHHHHHHHHHHhCC------------CCCC---
Q psy18060        262 GFARSMAVGTHM--LTSIKGTPLYMAPELIAERP-YD-----HTADLWSLGCIAYEIHMGH------------PPFK---  318 (549)
Q Consensus       262 Gla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~-y~-----~ksDIwSlGvil~eLltG~------------~Pf~---  318 (549)
                      |+|..+.++...  .-..+||.+|||||++.+.- ..     .+.||||+|.+||||++.-            .||.   
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            999887654322  23468999999999997632 22     3589999999999999732            2342   


Q ss_pred             --CCCHHHHHHHH--hcCCCCCCccC-----CHHHHHHHHHhchhCcCCCCCHH
Q psy18060        319 --TVSILHLIRLL--KTQDVTFPSQV-----SETYKDLVKGLLEKDASQRLSWP  363 (549)
Q Consensus       319 --~~~~~~~~~~i--~~~~~~~p~~~-----s~~~~dlI~~~L~~dP~~Rps~~  363 (549)
                        ..+..+.....  ...++.+|+.+     ..-+++.+..||..||+.|+|+.
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence              12333333332  34455566543     34678999999999999999984


No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97  E-value=2.2e-30  Score=245.33  Aligned_cols=211  Identities=43%  Similarity=0.721  Sum_probs=187.8

Q ss_pred             EecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCHH
Q psy18060        127 IGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAH-MSLS  205 (549)
Q Consensus       127 iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~  205 (549)
                      ||+|++|.||++....+++.+++|+........ ....+.+|++.++.+.|++|+++++++......+++||+++ ++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            689999999999998889999999987643221 34678999999999999999999999999899999999999 6999


Q ss_pred             HHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-CCcEEEeecccceecccCcccccccCCCCcc
Q psy18060        206 NLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-DGVAMLCDFGFARSMAVGTHMLTSIKGTPLY  283 (549)
Q Consensus       206 ~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y  283 (549)
                      +++... ..+++..+..++.+++.+|++||+.|++|+||+|.||+++. ++.++|+|||.+..............++..|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  159 (215)
T cd00180          80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY  159 (215)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc
Confidence            999876 57899999999999999999999999999999999999999 8999999999997765443223445688899


Q ss_pred             cccccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        284 MAPELIAER-PYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       284 ~APE~l~~~-~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                      ++||.+... .++.++|+|++|+++++|                               ..+.+++.+|+..+|.+||++
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccCcCH
Confidence            999999876 788999999999999999                               778899999999999999999


Q ss_pred             HHHhcCc
Q psy18060        363 PELLHHP  369 (549)
Q Consensus       363 ~elL~Hp  369 (549)
                      .++++|+
T Consensus       209 ~~l~~~~  215 (215)
T cd00180         209 KEILEHL  215 (215)
T ss_pred             HHHhhCC
Confidence            9999885


No 399
>KOG2052|consensus
Probab=99.97  E-value=5.4e-31  Score=268.20  Aligned_cols=240  Identities=27%  Similarity=0.432  Sum_probs=187.7

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHh--cCCCCeeEEEEEEeeC----C
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKH--LAHPNIIKFIASHETL----N  191 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~--l~hpnIv~l~~~~~~~----~  191 (549)
                      -...++.+.||+|.||.||+|.++  |+.||||++...     +..+..+|.+|.+.  |+|+||+.|++....+    .
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr-----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR-----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             hheeEEEEEecCccccceeecccc--CCceEEEEeccc-----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence            366789999999999999999998  899999999643     23456677777665  5999999999876443    3


Q ss_pred             EEEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CCccccccCCcEEEecCCcEEEeecc
Q psy18060        192 EFVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSN--------RVLHRDLKPQNVLLNKDGVAMLCDFG  262 (549)
Q Consensus       192 ~~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~--------gIiHrDIKP~NILl~~~g~vKL~DFG  262 (549)
                      .++||++|-+ |||.++|.. ..++.....+++..++.||++||..        .|.|||||..|||+..+|..-|+|+|
T Consensus       283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence            5899999976 899999987 6899999999999999999999964        49999999999999999999999999


Q ss_pred             cceecccCcc----cccccCCCCcccccccccCCC----C-C-cchhhHHHHHHHHHHHh-----C-----CCCCCC---
Q psy18060        263 FARSMAVGTH----MLTSIKGTPLYMAPELIAERP----Y-D-HTADLWSLGCIAYEIHM-----G-----HPPFKT---  319 (549)
Q Consensus       263 la~~~~~~~~----~~~~~~GT~~Y~APE~l~~~~----y-~-~ksDIwSlGvil~eLlt-----G-----~~Pf~~---  319 (549)
                      +|-.....+.    ..+..+||.+|||||++...-    + + .-+||||||.++||+..     |     ++||..   
T Consensus       362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp  441 (513)
T KOG2052|consen  362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP  441 (513)
T ss_pred             eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence            9976554322    245678999999999995431    1 1 24899999999999974     2     578854   


Q ss_pred             --CCHHHHHHHHh--cCCCCCCccCC--H---HHHHHHHHhchhCcCCCCCHHHH
Q psy18060        320 --VSILHLIRLLK--TQDVTFPSQVS--E---TYKDLVKGLLEKDASQRLSWPEL  365 (549)
Q Consensus       320 --~~~~~~~~~i~--~~~~~~p~~~s--~---~~~dlI~~~L~~dP~~Rps~~el  365 (549)
                        .+.++..+.+.  ..++.+|..+.  +   .+.++++.||..||.-|.|+--|
T Consensus       442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri  496 (513)
T KOG2052|consen  442 SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI  496 (513)
T ss_pred             CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence              23344433332  23344454332  2   34588999999999999998554


No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97  E-value=1.4e-29  Score=244.81  Aligned_cols=212  Identities=36%  Similarity=0.592  Sum_probs=184.1

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecC
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      |.+.+.||+|++|.||++.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++.+...+..++++|++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence            56788999999999999999988999999998764332 24578889999999999999999999998889999999999


Q ss_pred             CC-CHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc-cccccc
Q psy18060        201 HM-SLSNLLEQRKK-LSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT-HMLTSI  277 (549)
Q Consensus       201 ~g-sL~~~l~~~~~-l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~-~~~~~~  277 (549)
                      .+ +|.+++..... +++..+..++.|++.+|.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV  159 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence            86 99999988777 8999999999999999999999999999999999999999999999999998765432 122445


Q ss_pred             CCCCcccccccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCCC--CCHHHHHHHHhcCC
Q psy18060        278 KGTPLYMAPELI-AERPYDHTADLWSLGCIAYEIHMGHPPFKT--VSILHLIRLLKTQD  333 (549)
Q Consensus       278 ~GT~~Y~APE~l-~~~~y~~ksDIwSlGvil~eLltG~~Pf~~--~~~~~~~~~i~~~~  333 (549)
                      .++..|++||.+ ....++.++|+|+||+++++|++|+.||..  .+.....+.+..+.
T Consensus       160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            688899999998 777788899999999999999999999977  44446666666654


No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.97  E-value=1.5e-31  Score=307.96  Aligned_cols=195  Identities=16%  Similarity=0.232  Sum_probs=148.1

Q ss_pred             CCeeEEEEEE-------eeCCEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEE
Q psy18060        178 PNIIKFIASH-------ETLNEFVLITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVL  249 (549)
Q Consensus       178 pnIv~l~~~~-------~~~~~~~iV~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NIL  249 (549)
                      +||++++++|       .....++.+||+++++|.++|.. ...+++.+++.++.||+.||.|||++||+||||||+|||
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL  112 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV  112 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence            4677777766       23346788899999999999975 356999999999999999999999999999999999999


Q ss_pred             Eec-------------------CCcEEEeecccceecccCc----------------ccccccCCCCcccccccccCCCC
Q psy18060        250 LNK-------------------DGVAMLCDFGFARSMAVGT----------------HMLTSIKGTPLYMAPELIAERPY  294 (549)
Q Consensus       250 l~~-------------------~g~vKL~DFGla~~~~~~~----------------~~~~~~~GT~~Y~APE~l~~~~y  294 (549)
                      |+.                   ++.+||+|||+++......                .......||++|||||++.+..|
T Consensus       113 l~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~  192 (793)
T PLN00181        113 MSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSS  192 (793)
T ss_pred             EcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCC
Confidence            964                   3456677777765421100                00112468999999999999999


Q ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        295 DHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVT-FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       295 ~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      +.++|||||||+||||++|.+|+.....  ....+.....+ .+....+...+++.+||.++|.+|||+.|+++||||..
T Consensus       193 ~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        193 NCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             CchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence            9999999999999999999988764321  12222111111 11112456679999999999999999999999999975


Q ss_pred             c
Q psy18060        374 N  374 (549)
Q Consensus       374 ~  374 (549)
                      .
T Consensus       271 ~  271 (793)
T PLN00181        271 P  271 (793)
T ss_pred             h
Confidence            3


No 402
>KOG1167|consensus
Probab=99.97  E-value=2.4e-31  Score=269.93  Aligned_cols=250  Identities=28%  Similarity=0.430  Sum_probs=196.4

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcC---CCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLD---LKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      ...|..+.+||.|+|+.||++.+..   .+..||+|.+...+    ..+.+.+|+++|..+ -+.||+++.+++..++..
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v  110 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV  110 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence            3568899999999999999998887   78899999987643    235688999999998 589999999999999999


Q ss_pred             EEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceecc---
Q psy18060        194 VLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMA---  268 (549)
Q Consensus       194 ~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~---  268 (549)
                      .+||||.+. ...+++.   .++-.+++.+++.++.||.++|.+|||||||||+|+|.+.. +.-.|.|||+|....   
T Consensus       111 ~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~  187 (418)
T KOG1167|consen  111 AIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ  187 (418)
T ss_pred             EEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence            999999885 5665554   46788999999999999999999999999999999999865 678899999995110   


Q ss_pred             --------------c--Cc-------------------------ccccccCCCCcccccccccC-CCCCcchhhHHHHHH
Q psy18060        269 --------------V--GT-------------------------HMLTSIKGTPLYMAPELIAE-RPYDHTADLWSLGCI  306 (549)
Q Consensus       269 --------------~--~~-------------------------~~~~~~~GT~~Y~APE~l~~-~~y~~ksDIwSlGvi  306 (549)
                                    +  +.                         .......||++|+|||++.. +..+.++||||.|||
T Consensus       188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI  267 (418)
T KOG1167|consen  188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI  267 (418)
T ss_pred             hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence                          0  00                         00123469999999999865 556889999999999


Q ss_pred             HHHHHhCCCCCCCCC-----HHHHHH-----------------------------------------HHhcCCC------
Q psy18060        307 AYEIHMGHPPFKTVS-----ILHLIR-----------------------------------------LLKTQDV------  334 (549)
Q Consensus       307 l~eLltG~~Pf~~~~-----~~~~~~-----------------------------------------~i~~~~~------  334 (549)
                      +..+++++.||-...     ..++..                                         .+...+.      
T Consensus       268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~  347 (418)
T KOG1167|consen  268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE  347 (418)
T ss_pred             eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence            999999999994211     011000                                         0000000      


Q ss_pred             CCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        335 TFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       335 ~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ...+..+..+.+|+.+||..||.+|+|++++|+||||.+.
T Consensus       348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             cccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence            0011245688999999999999999999999999999843


No 403
>KOG1345|consensus
Probab=99.96  E-value=3.6e-30  Score=247.63  Aligned_cols=252  Identities=25%  Similarity=0.406  Sum_probs=198.4

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEE-EeeCCEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIAS-HETLNEFV  194 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~-~~~~~~~~  194 (549)
                      ..+.|.+.+.+|+|.||.+-+|.|+.++..+++|.+..+.   .....+.+|..---.| .|.||+.-|++ |+..+.++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv   98 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV   98 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence            3467999999999999999999999999999999997653   3455677776654444 68999998864 78888899


Q ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC--CcEEEeecccceecccCc
Q psy18060        195 LITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD--GVAMLCDFGFARSMAVGT  271 (549)
Q Consensus       195 iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~--g~vKL~DFGla~~~~~~~  271 (549)
                      +++||++ |+|..-+.. ..+.|...+.++.|+++|+.|||++++||||||.+||||-..  -+|||||||..+..+...
T Consensus        99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV  177 (378)
T KOG1345|consen   99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV  177 (378)
T ss_pred             EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence            9999999 899987765 568999999999999999999999999999999999999543  489999999987654322


Q ss_pred             ccccccCCCCcccccccccC---C--CCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCCCCCc---
Q psy18060        272 HMLTSIKGTPLYMAPELIAE---R--PYDHTADLWSLGCIAYEIHMGHPPFKTVS-----ILHLIRLLKTQDVTFPS---  338 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~---~--~y~~ksDIwSlGvil~eLltG~~Pf~~~~-----~~~~~~~i~~~~~~~p~---  338 (549)
                      .   ...-+..|.|||....   .  ..++.+|+|.||+++|.++||.+||+...     -.+............|.   
T Consensus       178 ~---~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~  254 (378)
T KOG1345|consen  178 K---YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN  254 (378)
T ss_pred             h---hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhc
Confidence            1   1223556889997632   2  24677999999999999999999997432     22333444444445564   


Q ss_pred             cCCHHHHHHHHHhchhCcCCC---CCHHHHhcCcccCccc
Q psy18060        339 QVSETYKDLVKGLLEKDASQR---LSWPELLHHPLVKDNL  375 (549)
Q Consensus       339 ~~s~~~~dlI~~~L~~dP~~R---ps~~elL~Hpw~~~~~  375 (549)
                      .+++.+..+.++-|.++|++|   -++......-|....+
T Consensus       255 ~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i  294 (378)
T KOG1345|consen  255 PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLI  294 (378)
T ss_pred             ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhh
Confidence            478999999999999999999   5666667777775443


No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96  E-value=4.5e-29  Score=234.27  Aligned_cols=158  Identities=26%  Similarity=0.330  Sum_probs=130.7

Q ss_pred             CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCC
Q psy18060        202 MSLSNLLEQR-KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGT  280 (549)
Q Consensus       202 gsL~~~l~~~-~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT  280 (549)
                      |+|.+++..+ ..+++.+++.++.||+.||.|||+++      ||+|||++.++.+|+  ||+++.....     ...||
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~g~   67 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSRVD   67 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-----cCCCc
Confidence            6899999874 45999999999999999999999998      999999999999999  9998766432     22689


Q ss_pred             CcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHhcCCCC-------CCccCCH--HHHHHHHH
Q psy18060        281 PLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSI-LHLIRLLKTQDVT-------FPSQVSE--TYKDLVKG  350 (549)
Q Consensus       281 ~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~-~~~~~~i~~~~~~-------~p~~~s~--~~~dlI~~  350 (549)
                      +.|||||++.+..|+.++|||||||++|||++|+.||..... ......+......       .+..++.  ++.++|.+
T Consensus        68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  147 (176)
T smart00750       68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV  147 (176)
T ss_pred             ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence            999999999999999999999999999999999999976543 2222222222111       1223444  69999999


Q ss_pred             hchhCcCCCCCHHHHhcCcccC
Q psy18060        351 LLEKDASQRLSWPELLHHPLVK  372 (549)
Q Consensus       351 ~L~~dP~~Rps~~elL~Hpw~~  372 (549)
                      ||..+|.+|||+.|+++|+|+.
T Consensus       148 cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      148 CASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHhcccccccCHHHHHHHHHHH
Confidence            9999999999999999999985


No 405
>KOG1024|consensus
Probab=99.96  E-value=1.7e-28  Score=246.13  Aligned_cols=248  Identities=19%  Similarity=0.347  Sum_probs=206.2

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCC-----ceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEe-eCCE
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLK-----KTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE-TLNE  192 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~-----~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~-~~~~  192 (549)
                      .+++....+-+|.||.||.|.++...     +.+-+|.+.. ..++-....+.+|.-++..+.|||+.++.++.. +...
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            45777788999999999999776432     3355565543 234455678889999999999999999998764 4455


Q ss_pred             EEEEEecCC-CCHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccc
Q psy18060        193 FVLITEFAH-MSLSNLLEQ--------RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGF  263 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~--------~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGl  263 (549)
                      .+.++.+.+ |+|..+|..        .+.++..+...++.|++.|++|||+.||||.||...|.+|++.-.|||+|=.+
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaL  442 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSAL  442 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchh
Confidence            667777777 789999873        13477888899999999999999999999999999999999999999999999


Q ss_pred             ceecccCcccc--cccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcC-CCCCCcc
Q psy18060        264 ARSMAVGTHML--TSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHM-GHPPFKTVSILHLIRLLKTQ-DVTFPSQ  339 (549)
Q Consensus       264 a~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLlt-G~~Pf~~~~~~~~~~~i~~~-~~~~p~~  339 (549)
                      +|..-+.....  .+...+..||+||.+....|+.++|+|||||+||||+| |+.|+...++.+....++.+ ++.-|-+
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~N  522 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFN  522 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCC
Confidence            99876543221  11234567999999999999999999999999999998 99999999999999888876 4567889


Q ss_pred             CCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        340 VSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       340 ~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      +|+++..++.-||...|++||+.+|+..
T Consensus       523 CPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  523 CPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            9999999999999999999999999854


No 406
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95  E-value=6.6e-26  Score=226.85  Aligned_cols=250  Identities=37%  Similarity=0.599  Sum_probs=208.8

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH-HHHHHHHHHHHHHhcCCC-CeeEEEEEEeeCCEEEEEEe
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAHP-NIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~~~Ei~il~~l~hp-nIv~l~~~~~~~~~~~iV~E  198 (549)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+........ ....+.+|+.+++.+.|+ +|+++++.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            778899999999999999887   7889999876654432 567889999999999988 79999999987777899999


Q ss_pred             cCCC-CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-cEEEeecccceecccCcc-
Q psy18060        199 FAHM-SLSNLLEQRK---KLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAVGTH-  272 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~---~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~~~~-  272 (549)
                      ++.+ ++.+++....   .+++.....++.|++.++.|+|+.|++||||||+||+++..+ .++++|||.++....... 
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            9985 7887777765   799999999999999999999999999999999999999998 799999999975544321 


Q ss_pred             -----cccccCCCCcccccccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHhcCCCC-CCcc
Q psy18060        273 -----MLTSIKGTPLYMAPELIAE---RPYDHTADLWSLGCIAYEIHMGHPPFKTVS----ILHLIRLLKTQDVT-FPSQ  339 (549)
Q Consensus       273 -----~~~~~~GT~~Y~APE~l~~---~~y~~ksDIwSlGvil~eLltG~~Pf~~~~----~~~~~~~i~~~~~~-~p~~  339 (549)
                           ......||+.|+|||.+.+   ..++...|+||+|++++++++|..||....    .......+...... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence                 2466789999999999987   578899999999999999999999987765    34555555444432 2221


Q ss_pred             C--------CHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        340 V--------SETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       340 ~--------s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      .        ...+.+++.+++..+|..|.+..+...++|...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            1        157899999999999999999999988866654


No 407
>KOG0590|consensus
Probab=99.94  E-value=1.3e-28  Score=272.21  Aligned_cols=252  Identities=24%  Similarity=0.365  Sum_probs=200.2

Q ss_pred             EEEEEecCCcEEEEEEEEcCCCceEEEEEEe----cCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        123 KICLIGEGSFGKVFKAIHLDLKKTVALKIIS----KSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       123 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~----~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ....+|.|++|.|+.+......+.++.|...    ...........+..|..+-..+.|||++.......+....+-.||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            4567999999988888777777777776543    111111222236778888889999999877665555555555599


Q ss_pred             cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC--c--ccc
Q psy18060        199 FAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG--T--HML  274 (549)
Q Consensus       199 ~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~--~--~~~  274 (549)
                      ||+++|+..+.....++..++..++.|++.||+|||+.||.||||||+|++++.+|.+||+|||.+.....+  .  ...
T Consensus       402 ~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~  481 (601)
T KOG0590|consen  402 YCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHES  481 (601)
T ss_pred             cccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhh
Confidence            999999999998889999999999999999999999999999999999999999999999999998654332  1  345


Q ss_pred             cccCCCCcccccccccCCCCCc-chhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-------HhcCCCCCCccCCHHH
Q psy18060        275 TSIKGTPLYMAPELIAERPYDH-TADLWSLGCIAYEIHMGHPPFKTVSILHLI--RL-------LKTQDVTFPSQVSETY  344 (549)
Q Consensus       275 ~~~~GT~~Y~APE~l~~~~y~~-ksDIwSlGvil~eLltG~~Pf~~~~~~~~~--~~-------i~~~~~~~p~~~s~~~  344 (549)
                      ...+|+..|+|||++.+..|++ .+||||.|+++..|.+|+.||......+..  ..       +..+...+...++...
T Consensus       482 ~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~  561 (601)
T KOG0590|consen  482 SGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRET  561 (601)
T ss_pred             cCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhH
Confidence            6778999999999999999985 589999999999999999999765443221  11       1111122224578889


Q ss_pred             HHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        345 KDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       345 ~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +.+|.+||++||.+|.|+++|++.+||+..
T Consensus       562 ~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  562 RIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            999999999999999999999999999864


No 408
>KOG1164|consensus
Probab=99.94  E-value=2.9e-25  Score=229.87  Aligned_cols=247  Identities=24%  Similarity=0.301  Sum_probs=195.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCC-ceEEEEEEecCCCChHHHHHHHHHHHHHHhcC----CCCeeEEEEEE-eeCCEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLK-KTVALKIISKSGRSGKELSSLKQECEIQKHLA----HPNIIKFIASH-ETLNEF  193 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~-~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~----hpnIv~l~~~~-~~~~~~  193 (549)
                      +|.+.+.||+|+||.||.|.+..++ ..+|+|+.........  ..+..|..++..+.    .+++..+++.. .....-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            8999999999999999999988775 6799998766432211  15677888888876    36899999998 577788


Q ss_pred             EEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-----CcEEEeeccccee
Q psy18060        194 VLITEFAHMSLSNLLEQR--KKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-----GVAMLCDFGFARS  266 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~~--~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-----g~vKL~DFGla~~  266 (549)
                      +|||++++.+|.++....  +.|+...+..++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||+|+.
T Consensus        97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            999999999999988654  579999999999999999999999999999999999999865     3689999999983


Q ss_pred             cc---cCcc------c-ccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---hcCC
Q psy18060        267 MA---VGTH------M-LTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLL---KTQD  333 (549)
Q Consensus       267 ~~---~~~~------~-~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i---~~~~  333 (549)
                      ..   ....      . .....||..|+++....+...+.+.|+||++.++.+++.|..||............   ....
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~  256 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL  256 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence            22   1110      1 12355999999999999999999999999999999999999999776532222221   1111


Q ss_pred             C-C-CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        334 V-T-FPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       334 ~-~-~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      . . +....+.++.++...+-..+...+|....+...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  257 LTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             ccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            1 1 233456788888888888899999998776544


No 409
>KOG0603|consensus
Probab=99.93  E-value=1.6e-27  Score=253.08  Aligned_cols=241  Identities=28%  Similarity=0.397  Sum_probs=210.4

Q ss_pred             EecCCcEEEEEEE---EcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEEEecCCC
Q psy18060        127 IGEGSFGKVFKAI---HLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLITEFAHM  202 (549)
Q Consensus       127 iG~G~fg~Vy~~~---~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV~E~~~g  202 (549)
                      +|+|+||.|+++.   -...+..||+|+..+.............|..++...+ ||.+|++...++.....++++++..|
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            6999999999764   3445778999998765433222225566778888886 99999999999999999999999885


Q ss_pred             -CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCC
Q psy18060        203 -SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTP  281 (549)
Q Consensus       203 -sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~  281 (549)
                       .|...+.+...+.+...+.+...++.|++++|+.||++||+|++||+++.+|++++.|||+++..-.....    |||.
T Consensus        82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----cgt~  157 (612)
T KOG0603|consen   82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----CGTY  157 (612)
T ss_pred             chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc----ccch
Confidence             89999999999999999999999999999999999999999999999999999999999999876543322    8999


Q ss_pred             cccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCC
Q psy18060        282 LYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLS  361 (549)
Q Consensus       282 ~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps  361 (549)
                      .|||||++.  .+..++|.||+|+++++|+||..||.+    ++...|....+.+|..++..+++++..++.++|.+|..
T Consensus       158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhc
Confidence            999999998  578899999999999999999999998    77778888888999999999999999999999999986


Q ss_pred             H-----HHHhcCcccCcccch
Q psy18060        362 W-----PELLHHPLVKDNLSS  377 (549)
Q Consensus       362 ~-----~elL~Hpw~~~~~~~  377 (549)
                      .     .|+++|+||....+.
T Consensus       232 ~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             cCcchhHHHhccchheeeeHh
Confidence            4     799999999876544


No 410
>KOG1033|consensus
Probab=99.93  E-value=6.3e-27  Score=244.35  Aligned_cols=357  Identities=21%  Similarity=0.257  Sum_probs=220.9

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccc----
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE----   82 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~----   82 (549)
                      ..++|+....+|.|+||+|+.+..+.++-.+|||.|...... ....+..+|..-+..+.||+|+.++..|.....    
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~~~q  125 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPLGWQ  125 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCCccc
Confidence            346789999999999999999999988889999999765432 234567889999999999999999988854321    


Q ss_pred             ----eehhhhhh---hcccccCCCC-------------------ccccCCCcccccc-----------------------
Q psy18060         83 ----FVLITEFA---HMSLSKLGEP-------------------WFHNHCQPVKMEK-----------------------  113 (549)
Q Consensus        83 ----~~lv~ey~---~~sLsklg~p-------------------~~~~~~~~~~~~~-----------------------  113 (549)
                          .-+.-++-   .+++.++...                   .++...+..+.+.                       
T Consensus       126 e~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~~rk  205 (516)
T KOG1033|consen  126 EEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSEFRK  205 (516)
T ss_pred             chhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhhhhh
Confidence                11111110   1112111000                   0000000111000                       


Q ss_pred             ---------------------ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC------------CCh-
Q psy18060        114 ---------------------SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG------------RSG-  159 (549)
Q Consensus       114 ---------------------~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~------------~~~-  159 (549)
                                           .........-....+.++++.+.++........+-.|......            ... 
T Consensus       206 ~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~  285 (516)
T KOG1033|consen  206 TSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSL  285 (516)
T ss_pred             hhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhccch
Confidence                                 0000000001112333334444444333222333222221110            000 


Q ss_pred             HHHHHHHHHHHHHHh-cCCCCeeEEE------EEE-----eeCCEEEEEEecCC-CCHHHHHHhcCC---CCHHHHHHHH
Q psy18060        160 KELSSLKQECEIQKH-LAHPNIIKFI------ASH-----ETLNEFVLITEFAH-MSLSNLLEQRKK---LSETICVQIL  223 (549)
Q Consensus       160 ~~~~~~~~Ei~il~~-l~hpnIv~l~------~~~-----~~~~~~~iV~E~~~-gsL~~~l~~~~~---l~e~~~~~i~  223 (549)
                      .......+++..+.. ..|+..+..-      ...     ....++||.|++|. .+|.+||..+..   -+......++
T Consensus       286 ~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~  365 (516)
T KOG1033|consen  286 CACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIF  365 (516)
T ss_pred             hhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHH
Confidence            001111122222222 2344433321      011     11235899999998 689999986543   5667788999


Q ss_pred             HHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCc------ccccccCCCCcccccccccCCCCCcc
Q psy18060        224 SNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGT------HMLTSIKGTPLYMAPELIAERPYDHT  297 (549)
Q Consensus       224 ~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~------~~~~~~~GT~~Y~APE~l~~~~y~~k  297 (549)
                      .|+..|++|   +|.+|||+||.||++..++.+||+|||+........      ...+...||.+||+||++.+..|+.+
T Consensus       366 ~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k  442 (516)
T KOG1033|consen  366 KQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK  442 (516)
T ss_pred             Hhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhh
Confidence            999999999   999999999999999999999999999987765432      23466789999999999999999999


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCC--CCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCccc
Q psy18060        298 ADLWSLGCIAYEIHMGHPPFKTV-SILHLIRLLKTQDVT--FPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLV  371 (549)
Q Consensus       298 sDIwSlGvil~eLltG~~Pf~~~-~~~~~~~~i~~~~~~--~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~  371 (549)
                      +||||||+||+||+.   +|.+. .......-+..+.++  +..+.| .-..|+.+||...|.+||++.+.--|+|.
T Consensus       443 vdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  443 VDIYALGLILAELLI---QFSTQFERIATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             cchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            999999999999997   23221 222333334444332  112233 34589999999999999998888888875


No 411
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92  E-value=1.2e-24  Score=226.72  Aligned_cols=176  Identities=18%  Similarity=0.215  Sum_probs=134.8

Q ss_pred             cccccceeEEEEEecCCcEEEEEEEEcC-CCceEEEEEEecCCC---ChHHHHHHHHHHHHHHhcCCCCeeE-EEEEEee
Q psy18060        115 NGALEKYQKICLIGEGSFGKVFKAIHLD-LKKTVALKIISKSGR---SGKELSSLKQECEIQKHLAHPNIIK-FIASHET  189 (549)
Q Consensus       115 ~~~~~~y~~~~~iG~G~fg~Vy~~~~~~-~~~~vAvK~i~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~-l~~~~~~  189 (549)
                      .....+|.+.+.||+|+||+||+|.+.. +++.+|||.+.....   .......+.+|+++++.+.|+|++. +++.   
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence            3446779999999999999999998876 677789998753211   2334567899999999999999985 5442   


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccc-cCCcEEEecCCcEEEeecccceec
Q psy18060        190 LNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL-KPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       190 ~~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDI-KP~NILl~~~g~vKL~DFGla~~~  267 (549)
                       +..|+||||+.| +|. .+.   ...   ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+..
T Consensus        91 -~~~~LVmE~~~G~~L~-~~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~  162 (365)
T PRK09188         91 -GKDGLVRGWTEGVPLH-LAR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF  162 (365)
T ss_pred             -CCcEEEEEccCCCCHH-HhC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence             457999999986 575 221   111   1467899999999999999999999 999999999999999999999866


Q ss_pred             ccCc--------ccccccCCCCcccccccccCCC------CCcchhhH
Q psy18060        268 AVGT--------HMLTSIKGTPLYMAPELIAERP------YDHTADLW  301 (549)
Q Consensus       268 ~~~~--------~~~~~~~GT~~Y~APE~l~~~~------y~~ksDIw  301 (549)
                      ....        ...++..+++.|+|||.+....      .+..+|-|
T Consensus       163 ~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        163 RRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            4322        1124567899999999985422      23346766


No 412
>KOG0606|consensus
Probab=99.91  E-value=1.2e-24  Score=241.28  Aligned_cols=274  Identities=27%  Similarity=0.434  Sum_probs=204.2

Q ss_pred             CCCCccccccccccccceehhhhhhhcccccCCCCccccCCCccccccccccccceeEEEEEecCCcEEEEEEEEcCCCc
Q psy18060         66 AHPNIIKFIASHETLNEFVLITEFAHMSLSKLGEPWFHNHCQPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHLDLKK  145 (549)
Q Consensus        66 ~HpnIV~l~~~~~~~~~~~lv~ey~~~sLsklg~p~~~~~~~~~~~~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~  145 (549)
                      +-|...+++++ + .+.+|...+...+--.+   |.-...............-.+|..++.|..|+||.||.++|+.+.+
T Consensus        35 ~~~~parllec-e-peefy~lle~aeg~~~~---p~~~~s~~~~~as~~~p~e~df~~IklisngAygavylvrh~~trq  109 (1205)
T KOG0606|consen   35 KSPSPARLLEC-E-PEEFYHLLEAAEGHARK---PMTDESPESRGASRRAPSESDFNTIKLISNGAYGAVYLVRHKETRQ  109 (1205)
T ss_pred             ccCCchhhccC-C-HHHHHHHHHhhhccccC---CCCCCCcccccccccCCCccccceeEeeccCCCCceeeeecccccc
Confidence            45667788887 4 77777777665433221   1111111100011233445779999999999999999999999999


Q ss_pred             eEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHH
Q psy18060        146 TVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSN  225 (549)
Q Consensus       146 ~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~q  225 (549)
                      .+|+|+ .+..       .+.+  .|+.....|.+|                    |+-...++..+.++...       
T Consensus       110 rfa~ki-Nkq~-------lilR--nilt~a~npfvv--------------------gDc~tllk~~g~lPvdm-------  152 (1205)
T KOG0606|consen  110 RFAMKI-NKQN-------LILR--NILTFAGNPFVV--------------------GDCATLLKNIGPLPVDM-------  152 (1205)
T ss_pred             chhhcc-cccc-------hhhh--ccccccCCccee--------------------chhhhhcccCCCCcchh-------
Confidence            999954 3321       1111  033334455544                    45555555556666443       


Q ss_pred             HHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC-------------c--ccccccCCCCccccccccc
Q psy18060        226 LISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG-------------T--HMLTSIKGTPLYMAPELIA  290 (549)
Q Consensus       226 Il~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~-------------~--~~~~~~~GT~~Y~APE~l~  290 (549)
                       +.+++|||+-||+|||+||+|.+|+.-|++|++|||+++.....             .  -.....||||.|+|||++.
T Consensus       153 -vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil  231 (1205)
T KOG0606|consen  153 -VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL  231 (1205)
T ss_pred             -hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence             78999999999999999999999999999999999998642110             0  1124569999999999999


Q ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHhchhCcCCCC---CHHH
Q psy18060        291 ERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPS---QVSETYKDLVKGLLEKDASQRL---SWPE  364 (549)
Q Consensus       291 ~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~dlI~~~L~~dP~~Rp---s~~e  364 (549)
                      .+.|+..+|+|++|+|+||.+-|..||.+.++++++.......+.+|.   .++++++++|.++|+.+|..|.   ++-+
T Consensus       232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e  311 (1205)
T KOG0606|consen  232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALE  311 (1205)
T ss_pred             hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence            999999999999999999999999999999999999988877777774   4789999999999999999997   4678


Q ss_pred             HhcCcccCcccchhhhhc
Q psy18060        365 LLHHPLVKDNLSSEIESQ  382 (549)
Q Consensus       365 lL~Hpw~~~~~~~~~~~~  382 (549)
                      +.+|+||+...+..+-++
T Consensus       312 vk~h~ff~~LDw~~llRq  329 (1205)
T KOG0606|consen  312 VKQHGFFQLLDWKSLLRQ  329 (1205)
T ss_pred             hhhccceeecccchhhhh
Confidence            999999998776644333


No 413
>KOG1163|consensus
Probab=99.91  E-value=1.5e-23  Score=199.19  Aligned_cols=242  Identities=19%  Similarity=0.295  Sum_probs=198.5

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~i  195 (549)
                      ...+|.+++.||+|+||.+|.|....+|..||||+-+.....    ..+.-|.++.+.|+ .+.|+.+..+..+.+.-.+
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl   88 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL   88 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence            357799999999999999999999999999999997654332    34677889988886 4788888888888888899


Q ss_pred             EEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC---CcEEEeecccceecccC-
Q psy18060        196 ITEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD---GVAMLCDFGFARSMAVG-  270 (549)
Q Consensus       196 V~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~---g~vKL~DFGla~~~~~~-  270 (549)
                      ||++.+.+|.+++.- .+.|+...+.-++-|++.-++|+|.+++|||||||+|.|+.-+   ..+.++|||+|+..... 
T Consensus        89 VMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   89 VMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             eeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            999999999988864 4679999999999999999999999999999999999999643   46899999999765422 


Q ss_pred             ------cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHhcCCCCCC----
Q psy18060        271 ------THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVS---ILHLIRLLKTQDVTFP----  337 (549)
Q Consensus       271 ------~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~---~~~~~~~i~~~~~~~p----  337 (549)
                            ........||..|.+=....+...+...|+=|+|.+|..+..|..||++..   ..+-.++|.......|    
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~L  248 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVL  248 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHH
Confidence                  122355679999999877777777888999999999999999999998864   4455566666555544    


Q ss_pred             -ccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        338 -SQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       338 -~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                       ..+|.++.-.+.-|-..--+.-|..
T Consensus       249 C~G~P~EF~myl~Y~R~L~F~E~Pdy  274 (341)
T KOG1163|consen  249 CKGFPAEFAMYLNYCRGLGFEEKPDY  274 (341)
T ss_pred             hCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence             4688899988888877766666764


No 414
>KOG1165|consensus
Probab=99.90  E-value=1.3e-22  Score=200.47  Aligned_cols=241  Identities=22%  Similarity=0.327  Sum_probs=196.2

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLI  196 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV  196 (549)
                      --.|++.++||+|+||..+.|.+.-+++.||||.-...+..    -.+..|.+..+.| ..++|++.|.+...+.+-.+|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A----PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA----PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccCCc----chHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            35799999999999999999999999999999986554332    3567788888888 579999999999888888999


Q ss_pred             EecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCC-----cEEEeecccceecccC
Q psy18060        197 TEFAHMSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDG-----VAMLCDFGFARSMAVG  270 (549)
Q Consensus       197 ~E~~~gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g-----~vKL~DFGla~~~~~~  270 (549)
                      +|+++-+|.++++- .++|+...+..++.|++.-++|+|++.+|.|||||+|+||...|     .+.|+|||+|+.....
T Consensus       103 idLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             hhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence            99999999998875 56799999999999999999999999999999999999997543     6889999999876432


Q ss_pred             c-------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHhcCCCCCC---
Q psy18060        271 T-------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV---SILHLIRLLKTQDVTFP---  337 (549)
Q Consensus       271 ~-------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~---~~~~~~~~i~~~~~~~p---  337 (549)
                      .       ....+..||..||+=..-.+...+..-|+=|||-+++..|.|..||.+.   +..+-+++|-......|   
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~  262 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEV  262 (449)
T ss_pred             cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHH
Confidence            1       2235678999999988888888999999999999999999999999874   55666777755443333   


Q ss_pred             --ccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        338 --SQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       338 --~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                        .++|.++...+.-.-..+-..-|..
T Consensus       263 Lc~g~P~efa~Yl~yvR~L~F~E~PDY  289 (449)
T KOG1165|consen  263 LCEGFPEEFATYLRYVRRLDFFETPDY  289 (449)
T ss_pred             HHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence              3567776666655544444444543


No 415
>KOG1240|consensus
Probab=99.89  E-value=6.6e-24  Score=235.35  Aligned_cols=236  Identities=23%  Similarity=0.317  Sum_probs=184.5

Q ss_pred             ceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC--CChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEE
Q psy18060        120 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG--RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT  197 (549)
Q Consensus       120 ~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~  197 (549)
                      ++...+.||++.|=+|.+|++.+ |. ++||++-+..  .+-........|++ ...+++||.+.+.-+-......|+|-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            57778999999999999998875 44 9999987654  22233344445555 56679999999988877778889999


Q ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcc---cc
Q psy18060        198 EFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTH---ML  274 (549)
Q Consensus       198 E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~---~~  274 (549)
                      +|...+|.+.|..++-+...+.+.|+.||+.||..+|..||+|||||.+||||+.-+-+.|+||..-+..--..+   ..
T Consensus       101 qyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf  180 (1431)
T KOG1240|consen  101 QYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADF  180 (1431)
T ss_pred             HHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccc
Confidence            999999999999998899999999999999999999999999999999999999999999999986543211110   11


Q ss_pred             ----cccCCCCcccccccccCC----------C-CCcchhhHHHHHHHHHHHh-CCCCCCCC-----------CHHHHHH
Q psy18060        275 ----TSIKGTPLYMAPELIAER----------P-YDHTADLWSLGCIAYEIHM-GHPPFKTV-----------SILHLIR  327 (549)
Q Consensus       275 ----~~~~GT~~Y~APE~l~~~----------~-y~~ksDIwSlGvil~eLlt-G~~Pf~~~-----------~~~~~~~  327 (549)
                          -+...-.+|.|||.+...          + .+++.||||+||+++||++ |++||.-.           .++..++
T Consensus       181 ~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le  260 (1431)
T KOG1240|consen  181 TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLE  260 (1431)
T ss_pred             eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHH
Confidence                111233569999988541          1 5678999999999999997 78888421           2222222


Q ss_pred             HHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcC
Q psy18060        328 LLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHH  368 (549)
Q Consensus       328 ~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~H  368 (549)
                      .|          -+..++++|..|++.||.+|.+|++.|+.
T Consensus       261 ~I----------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  261 KI----------EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             hC----------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            22          23468899999999999999999999985


No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88  E-value=1.7e-22  Score=193.34  Aligned_cols=140  Identities=22%  Similarity=0.176  Sum_probs=108.8

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHH------------------------HHHHHHHHHHHHhcCCCC
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKE------------------------LSSLKQECEIQKHLAHPN  179 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~------------------------~~~~~~Ei~il~~l~hpn  179 (549)
                      .+.||+|+||.||+|.+. +|+.||+|++.........                        .....+|++++..+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999987 8999999999754321111                        122345999999998777


Q ss_pred             eeEEEEEEeeCCEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCCccccccCCcEEEecCCcEE
Q psy18060        180 IIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYL-HSNRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       180 Iv~l~~~~~~~~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yL-H~~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      +........ .+ .+|||||++| ++...+.....+++..+..++.|++.+|.|| |+.||+||||||+|||++ ++.++
T Consensus        81 v~~p~~~~~-~~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          81 IPCPEPILL-KS-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCCcEEEe-cC-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence            643322222 22 3899999996 4544444457899999999999999999999 799999999999999998 57899


Q ss_pred             Eeecccceec
Q psy18060        258 LCDFGFARSM  267 (549)
Q Consensus       258 L~DFGla~~~  267 (549)
                      |+|||+|...
T Consensus       158 LiDFG~a~~~  167 (190)
T cd05147         158 IIDVSQSVEH  167 (190)
T ss_pred             EEEccccccC
Confidence            9999998654


No 417
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.88  E-value=3.9e-22  Score=200.19  Aligned_cols=233  Identities=24%  Similarity=0.359  Sum_probs=152.0

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCC---C-------CeeEEEE--
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAH---P-------NIIKFIA--  185 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~h---p-------nIv~l~~--  185 (549)
                      ......+.||.|+++.||.+.+..||+.+|+|+...... .....+.+++|.-....+.+   |       .++-.++  
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            346778999999999999999999999999999765543 23345666666544433222   1       1111111  


Q ss_pred             -------EEeeC---C-----EEEEEEecCCCCHHHHHH---hcCCCC----HHHHHHHHHHHHHHHHHHHhCCCccccc
Q psy18060        186 -------SHETL---N-----EFVLITEFAHMSLSNLLE---QRKKLS----ETICVQILSNLISALYYLHSNRVLHRDL  243 (549)
Q Consensus       186 -------~~~~~---~-----~~~iV~E~~~gsL~~~l~---~~~~l~----e~~~~~i~~qIl~aL~yLH~~gIiHrDI  243 (549)
                             ++...   .     +.+++|.-+.++|.+++.   ......    -.....+..|++..+++||+.|++|+||
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                   11111   1     235677778888877754   333321    1223456689999999999999999999


Q ss_pred             cCCcEEEecCCcEEEeecccceecccCcccccccCCCCcccccccccC--------CCCCcchhhHHHHHHHHHHHhCCC
Q psy18060        244 KPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAE--------RPYDHTADLWSLGCIAYEIHMGHP  315 (549)
Q Consensus       244 KP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~y~~ksDIwSlGvil~eLltG~~  315 (549)
                      +|+|+|++.+|.+.|+||+.....+...   .....+..|.|||....        ..++.+.|.|+||+++|.|.+|..
T Consensus       172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l  248 (288)
T PF14531_consen  172 KPENFLLDQDGGVFLGDFSSLVRAGTRY---RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL  248 (288)
T ss_dssp             SGGGEEE-TTS-EEE--GGGEEETTEEE---EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred             ceeeEEEcCCCCEEEcChHHHeecCcee---eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence            9999999999999999999876654321   11345678999998743        357899999999999999999999


Q ss_pred             CCCCCCHHHHHH-HHhcCCCCCCccCCHHHHHHHHHhchhCcCCC
Q psy18060        316 PFKTVSILHLIR-LLKTQDVTFPSQVSETYKDLVKGLLEKDASQR  359 (549)
Q Consensus       316 Pf~~~~~~~~~~-~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~R  359 (549)
                      ||.......... ....+     .++|+.++.||.++|++||.+|
T Consensus       249 Pf~~~~~~~~~~~~f~~C-----~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  249 PFGLSSPEADPEWDFSRC-----RDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             STCCCGGGSTSGGGGTTS-----S---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCCccccccccchhc-----CCcCHHHHHHHHHHccCCcccC
Confidence            998654332221 11111     2688999999999999999988


No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87  E-value=4.9e-22  Score=193.90  Aligned_cols=170  Identities=15%  Similarity=0.155  Sum_probs=131.3

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH-HHHH------HHHHHHHHHhcCCCCeeEEEEEEeeC-
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSS------LKQECEIQKHLAHPNIIKFIASHETL-  190 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-~~~~------~~~Ei~il~~l~hpnIv~l~~~~~~~-  190 (549)
                      .+|++.+.+|.|+||.||.+..  ++..+|+|++........ ....      +.+|++.+.++.||+|+....++... 
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            6799999999999999999654  467899999965432222 2222      67999999999999999988876533 


Q ss_pred             -------CEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecc
Q psy18060        191 -------NEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFG  262 (549)
Q Consensus       191 -------~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFG  262 (549)
                             +..+|+|||++| +|.++.    .+++.    ...+++.+|..||+.|++||||||+||+++.+| ++|+|||
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg  179 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS  179 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence                   357899999997 787763    23332    456999999999999999999999999999999 9999999


Q ss_pred             cceecccCcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHH
Q psy18060        263 FARSMAVGTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIH  311 (549)
Q Consensus       263 la~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLl  311 (549)
                      ..+........            ..+.....|+.++|+||||+++..+.
T Consensus       180 ~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        180 GKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence            87644221110            11344556788999999999987654


No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86  E-value=2.8e-21  Score=184.94  Aligned_cols=141  Identities=20%  Similarity=0.152  Sum_probs=111.1

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh----------------------H--HHHHHHHHHHHHHhcCCCC
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG----------------------K--ELSSLKQECEIQKHLAHPN  179 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~----------------------~--~~~~~~~Ei~il~~l~hpn  179 (549)
                      .+.||+|++|.||+|.+. +|+.||||++.......                      .  .......|...+.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 89999999997653110                      0  0123467899999999998


Q ss_pred             eeEEEEEEeeCCEEEEEEecCCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcEE
Q psy18060        180 IIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       180 Iv~l~~~~~~~~~~~iV~E~~~gs-L~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      +..........  .++||||++|. +.........+++..+..++.|++.+|.+||+ +||+||||||+|||++ ++.++
T Consensus        81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~  157 (190)
T cd05145          81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPY  157 (190)
T ss_pred             CCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEE
Confidence            75433332222  48999999864 43332344678889999999999999999999 9999999999999998 88999


Q ss_pred             Eeecccceecc
Q psy18060        258 LCDFGFARSMA  268 (549)
Q Consensus       258 L~DFGla~~~~  268 (549)
                      |+|||+|+...
T Consensus       158 liDFG~a~~~~  168 (190)
T cd05145         158 IIDVSQAVELD  168 (190)
T ss_pred             EEEcccceecC
Confidence            99999997664


No 420
>KOG4158|consensus
Probab=99.84  E-value=9.3e-21  Score=191.18  Aligned_cols=248  Identities=28%  Similarity=0.368  Sum_probs=175.7

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCc-----------------------------------eEEEEEEecCCC-
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKK-----------------------------------TVALKIISKSGR-  157 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~-----------------------------------~vAvK~i~~~~~-  157 (549)
                      +.-.+++|++...||+|....||.+.....|.                                   +.|||.+-.-.. 
T Consensus       152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~  231 (598)
T KOG4158|consen  152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD  231 (598)
T ss_pred             cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence            33457889999999999999999887543211                                   135665533221 


Q ss_pred             --ChHHHHHHHHHHH------HH--------Hh--------cCCCCeeEEEEEEee------------------------
Q psy18060        158 --SGKELSSLKQECE------IQ--------KH--------LAHPNIIKFIASHET------------------------  189 (549)
Q Consensus       158 --~~~~~~~~~~Ei~------il--------~~--------l~hpnIv~l~~~~~~------------------------  189 (549)
                        +...++.+-+|.-      .+        +.        -+|||||++...|.+                        
T Consensus       232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g  311 (598)
T KOG4158|consen  232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSG  311 (598)
T ss_pred             CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccc
Confidence              1222233333311      11        11        269999998765432                        


Q ss_pred             ---CCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEe--cCC--cEEEeecc
Q psy18060        190 ---LNEFVLITEFAHMSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLN--KDG--VAMLCDFG  262 (549)
Q Consensus       190 ---~~~~~iV~E~~~gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~--~~g--~vKL~DFG  262 (549)
                         ...+|+||.-...+|+.++..+ ..+....+-++.|+++|+.|||++||.|||+|..|||+.  +++  .+.|+|||
T Consensus       312 ~g~~~tlylvMkrY~~tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFG  390 (598)
T KOG4158|consen  312 AGEPKTLYLVMKRYRQTLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFG  390 (598)
T ss_pred             cCCCceEEEehhcchhhHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccc
Confidence               2358999998889999999865 466677788999999999999999999999999999994  343  57899999


Q ss_pred             cceecccCc------ccccccCCCCcccccccccCCC-----C-CcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHH
Q psy18060        263 FARSMAVGT------HMLTSIKGTPLYMAPELIAERP-----Y-DHTADLWSLGCIAYEIHMGHPPFKTVSILHL--IRL  328 (549)
Q Consensus       263 la~~~~~~~------~~~~~~~GT~~Y~APE~l~~~~-----y-~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~--~~~  328 (549)
                      ++-......      ...-..-|...-||||+....+     . -.|+|.|+.|.+.||+++...||........  ...
T Consensus       391 CcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y  470 (598)
T KOG4158|consen  391 CCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY  470 (598)
T ss_pred             eeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh
Confidence            863322110      0112335788899999986432     1 2579999999999999999999976432211  111


Q ss_pred             HhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        329 LKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       329 i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                      ...+-+.+|+.+++.+++++..+|++||.+|++.
T Consensus       471 qe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  471 QESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP  504 (598)
T ss_pred             hhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence            2233456788999999999999999999999996


No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83  E-value=1.1e-19  Score=174.09  Aligned_cols=186  Identities=14%  Similarity=0.070  Sum_probs=138.1

Q ss_pred             eEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH--HHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEEEEe
Q psy18060        122 QKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK--ELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       122 ~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      .+...|++|+||+|+.+..  .+..++.+.+.-......  ....+.+|+++|+++. |+++++++++    +..+++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3567899999999997754  467777666654332111  1225789999999995 5889999886    34689999


Q ss_pred             cCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccc-cCCcEEEecCCcEEEeecccceecccCccc---
Q psy18060        199 FAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDL-KPQNVLLNKDGVAMLCDFGFARSMAVGTHM---  273 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDI-KP~NILl~~~g~vKL~DFGla~~~~~~~~~---  273 (549)
                      |+.| +|...+..      . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|.........   
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            9887 57543321      1 2357889999999999999999999 799999999999999999999855433210   


Q ss_pred             ----------ccccCCCCcccccccccCC-CCC-cchhhHHHHHHHHHHHhCCCCCCCC
Q psy18060        274 ----------LTSIKGTPLYMAPELIAER-PYD-HTADLWSLGCIAYEIHMGHPPFKTV  320 (549)
Q Consensus       274 ----------~~~~~GT~~Y~APE~l~~~-~y~-~ksDIwSlGvil~eLltG~~Pf~~~  320 (549)
                                ......++.|++|+...-- ..+ ...+.++.|+-+|.++|+..|..+.
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                      0112368888999865321 223 5678899999999999999987654


No 422
>KOG0195|consensus
Probab=99.82  E-value=7.9e-21  Score=183.29  Aligned_cols=238  Identities=19%  Similarity=0.374  Sum_probs=191.5

Q ss_pred             cceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        119 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       119 ~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ....++.+|.+...|..|+|++.  |..+++|++.....+....+.+..|.-.++.+.||||+.+++.+...-++.++..
T Consensus       190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq  267 (448)
T KOG0195|consen  190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ  267 (448)
T ss_pred             hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence            33456667888999999999987  5566778876655555555678888889999999999999999999999999999


Q ss_pred             cCC-CCHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC-Cc-cccccCCcEEEecCCcEEE--eecccceecccCc
Q psy18060        199 FAH-MSLSNLLEQRKK--LSETICVQILSNLISALYYLHSNR-VL-HRDLKPQNVLLNKDGVAML--CDFGFARSMAVGT  271 (549)
Q Consensus       199 ~~~-gsL~~~l~~~~~--l~e~~~~~i~~qIl~aL~yLH~~g-Ii-HrDIKP~NILl~~~g~vKL--~DFGla~~~~~~~  271 (549)
                      |++ |+|.++|.....  .+..++.+++.+++.|+.|||+.. ++ ---|....+++|++-+.+|  +|--++-      
T Consensus       268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf------  341 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------  341 (448)
T ss_pred             eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee------
Confidence            998 799999987644  577889999999999999999973 33 4568888999999876654  3322221      


Q ss_pred             ccccccCCCCcccccccccCCCCC---cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHH
Q psy18060        272 HMLTSIKGTPLYMAPELIAERPYD---HTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQ--DVTFPSQVSETYKD  346 (549)
Q Consensus       272 ~~~~~~~GT~~Y~APE~l~~~~y~---~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~d  346 (549)
                       ......-.|.||+||.+...+-+   .++|+|||++++|||.|...||...++.+.--+|...  +..+|+.++.....
T Consensus       342 -qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~k  420 (448)
T KOG0195|consen  342 -QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNK  420 (448)
T ss_pred             -eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHH
Confidence             11222346889999999765533   5799999999999999999999999988877665433  46789999999999


Q ss_pred             HHHHhchhCcCCCCCHHHH
Q psy18060        347 LVKGLLEKDASQRLSWPEL  365 (549)
Q Consensus       347 lI~~~L~~dP~~Rps~~el  365 (549)
                      +++-|+..||.+||.+..+
T Consensus       421 lm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  421 LMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             HHHHHhcCCCCcCCCccee
Confidence            9999999999999998665


No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.82  E-value=1.6e-19  Score=175.07  Aligned_cols=133  Identities=26%  Similarity=0.414  Sum_probs=106.3

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-----CCCCeeEEEEEEeeCC---EEE-
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-----AHPNIIKFIASHETLN---EFV-  194 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~l~~~~~~~~---~~~-  194 (549)
                      .+.||+|+||.||.  +..++.. +||++.....  .....+.+|+.+++.+     .||||+++++++++..   .++ 
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            46899999999995  6666555 6998865332  2345789999999999     6799999999998874   333 


Q ss_pred             EEEecCC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCCccccccCCcEEEecC----CcEEEeecccc
Q psy18060        195 LITEFAH---MSLSNLLEQRKKLSETICVQILSNLISAL-YYLHSNRVLHRDLKPQNVLLNKD----GVAMLCDFGFA  264 (549)
Q Consensus       195 iV~E~~~---gsL~~~l~~~~~l~e~~~~~i~~qIl~aL-~yLH~~gIiHrDIKP~NILl~~~----g~vKL~DFGla  264 (549)
                      +||||++   ++|.+++++ ..+++.  ..++.|++.++ +|||+++|+||||||+|||++..    +.++|+||+.+
T Consensus        82 ~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            7899955   599999976 457766  35688888888 99999999999999999999743    37999995544


No 424
>KOG1166|consensus
Probab=99.79  E-value=4.9e-19  Score=200.38  Aligned_cols=193  Identities=26%  Similarity=0.382  Sum_probs=157.3

Q ss_pred             cccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC---CCCeeEEEEEEeeCCEE
Q psy18060        117 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA---HPNIIKFIASHETLNEF  193 (549)
Q Consensus       117 ~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~---hpnIv~l~~~~~~~~~~  193 (549)
                      ..+.|.+-+.||+|+||.||+|.+.+ |+.||+|+-+......--+     -.+++.+|+   -|.|..+...+.-.+.-
T Consensus       696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence            34679999999999999999999988 9999999976654321111     123333443   23455555555556667


Q ss_pred             EEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEec-------CCcEEEeecccce
Q psy18060        194 VLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNK-------DGVAMLCDFGFAR  265 (549)
Q Consensus       194 ~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~-------~g~vKL~DFGla~  265 (549)
                      ++|+||.+ |+|.+++...+.++|..+..++.|++..++.||..+|||+||||.|.||..       .-.++|+|||.|-
T Consensus       770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            89999988 899999998899999999999999999999999999999999999999953       2369999999997


Q ss_pred             eccc--CcccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCC
Q psy18060        266 SMAV--GTHMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHP  315 (549)
Q Consensus       266 ~~~~--~~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~  315 (549)
                      .+..  +....+..++|-.+-.+|+..|.+++..+|.|.|+.+++.||+|++
T Consensus       850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            6642  2234567789999999999999999999999999999999999975


No 425
>smart00090 RIO RIO-like kinase.
Probab=99.79  E-value=5.7e-19  Score=174.76  Aligned_cols=143  Identities=20%  Similarity=0.168  Sum_probs=112.8

Q ss_pred             eeEEEEEecCCcEEEEEEE-EcCCCceEEEEEEecCCCCh--------------------H--HHHHHHHHHHHHHhcCC
Q psy18060        121 YQKICLIGEGSFGKVFKAI-HLDLKKTVALKIISKSGRSG--------------------K--ELSSLKQECEIQKHLAH  177 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~--------------------~--~~~~~~~Ei~il~~l~h  177 (549)
                      |.+.+.||+|++|.||+|. +..+|+.||+|++.......                    .  ....+..|+.++..+.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6788899999999999998 77789999999987542110                    0  11245689999999975


Q ss_pred             C--CeeEEEEEEeeCCEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-CccccccCCcEEEecC
Q psy18060        178 P--NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNR-VLHRDLKPQNVLLNKD  253 (549)
Q Consensus       178 p--nIv~l~~~~~~~~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IiHrDIKP~NILl~~~  253 (549)
                      .  .+++.++.   . ..++||||++| +|.........+.+..+..++.||+.+|.+||+.| |+||||||+||+++ +
T Consensus       110 ~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~  184 (237)
T smart00090      110 AGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D  184 (237)
T ss_pred             cCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C
Confidence            3  34455543   2 34899999997 56655544556777778899999999999999999 99999999999999 8


Q ss_pred             CcEEEeecccceecc
Q psy18060        254 GVAMLCDFGFARSMA  268 (549)
Q Consensus       254 g~vKL~DFGla~~~~  268 (549)
                      +.++|+|||.|....
T Consensus       185 ~~i~LiDFg~a~~~~  199 (237)
T smart00090      185 GKVVIIDVSQSVELD  199 (237)
T ss_pred             CCEEEEEChhhhccC
Confidence            899999999986543


No 426
>KOG0590|consensus
Probab=99.78  E-value=1.3e-20  Score=208.72  Aligned_cols=256  Identities=28%  Similarity=0.394  Sum_probs=207.6

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEc-CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcC-CCCeeEEEEEEeeCCEEEE
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHL-DLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVL  195 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~i  195 (549)
                      ...|.+.+.||+|+|+.|-.+... .+...+|.|.+...............|..+...+. |+|++.+++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            556888899999999999877663 44556777877665444444556667888888886 9999999999999999999


Q ss_pred             EEecCCC-CHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCCccccccCCcEEEecCC-cEEEeecccceeccc-
Q psy18060        196 ITEFAHM-SLSNLL-EQRK-KLSETICVQILSNLISALYYLH-SNRVLHRDLKPQNVLLNKDG-VAMLCDFGFARSMAV-  269 (549)
Q Consensus       196 V~E~~~g-sL~~~l-~~~~-~l~e~~~~~i~~qIl~aL~yLH-~~gIiHrDIKP~NILl~~~g-~vKL~DFGla~~~~~-  269 (549)
                      .+++..| ++..-+ .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .++++|||+|..... 
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            9999774 788887 5554 6788888999999999999999 99999999999999999999 999999999987654 


Q ss_pred             C--cccccccCC-CCcccccccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHhcC---CCCCCccC
Q psy18060        270 G--THMLTSIKG-TPLYMAPELIAERP-YDHTADLWSLGCIAYEIHMGHPPFKTVSILHLI--RLLKTQ---DVTFPSQV  340 (549)
Q Consensus       270 ~--~~~~~~~~G-T~~Y~APE~l~~~~-y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~--~~i~~~---~~~~p~~~  340 (549)
                      .  .......+| ++.|+|||...+.. .....|+||+|+++.-+++|..||.........  ..+...   .......+
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI  258 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence            2  223345678 99999999998854 467799999999999999999999765433221  111111   23344678


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcCcccCc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHHPLVKD  373 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~  373 (549)
                      +....+++.+++..+|..|.+.+++..+||+..
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ChhhhhcccccccCCchhccccccccccccccc
Confidence            899999999999999999999999999999987


No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78  E-value=3.5e-18  Score=165.40  Aligned_cols=135  Identities=19%  Similarity=0.254  Sum_probs=111.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH------HHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK------ELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~------~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      +.||+|++|.||+|..  .+..+++|..........      ....+.+|+.++..+.|++|+....++...+..+++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            5799999999999987  577899998654322111      12457789999999999988776666666677899999


Q ss_pred             cCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        199 FAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       199 ~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      |++| +|.+++.....    ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||.++.
T Consensus        80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9986 89988875432    7788999999999999999999999999999999 78999999998865


No 428
>KOG0601|consensus
Probab=99.78  E-value=2.1e-19  Score=191.47  Aligned_cols=357  Identities=21%  Similarity=0.193  Sum_probs=255.4

Q ss_pred             Ceeeeeeecc--cCceEEEEEEE--CCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcC-CCCcccccccccccccee
Q psy18060         10 KYQKICLIGE--GSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFV   84 (549)
Q Consensus        10 ~y~~~~~IG~--G~fG~V~~~~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~   84 (549)
                      .|.....+|.  |.+|.||.+..  ..++..+|+|+=+...........-.+|......++ |+|.++.+..|+.....+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            3566788999  99999999998  889999999994332221122223346776666776 999999999999988888


Q ss_pred             hhhhhhhcccccCCCCcc------------------------ccCCC-----ccccc------c-ccccccceeEEEEEe
Q psy18060         85 LITEFAHMSLSKLGEPWF------------------------HNHCQ-----PVKME------K-SNGALEKYQKICLIG  128 (549)
Q Consensus        85 lv~ey~~~sLsklg~p~~------------------------~~~~~-----~~~~~------~-~~~~~~~y~~~~~iG  128 (549)
                      +-.|++..++...-..+.                        +.|.+     ....+      . ......+|..+..||
T Consensus       195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~  274 (524)
T KOG0601|consen  195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKIS  274 (524)
T ss_pred             eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEcc
Confidence            888877655433211110                        01111     01111      1 122346788999999


Q ss_pred             cCCcEEEEEEEEc-CCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEEEEEEecCC-CCHH
Q psy18060        129 EGSFGKVFKAIHL-DLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEFVLITEFAH-MSLS  205 (549)
Q Consensus       129 ~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~  205 (549)
                      .|.|+.|+.+..+ .++..|++|...+..........-..|+.+...+ .|.+++..+..+......||-.|||. +++.
T Consensus       275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~  354 (524)
T KOG0601|consen  275 DGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSS  354 (524)
T ss_pred             CCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchh
Confidence            9999999988755 6788999998876544333333334566666555 68899998888877788889999997 4544


Q ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceecccCcccccccCCCCccc
Q psy18060        206 NLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSMAVGTHMLTSIKGTPLYM  284 (549)
Q Consensus       206 ~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~  284 (549)
                      ..+.-...+.+...+.+..|++.|+.++|+..++|+|+||+||++..+ +..+++|||.++.+...   .....++-+++
T Consensus       355 l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~---~~~~~~~~r~~  431 (524)
T KOG0601|consen  355 LRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS---SGVFHHIDRLY  431 (524)
T ss_pred             hhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee---ccccccccccc
Confidence            444434467888899999999999999999999999999999999886 78889999998754321   12222333444


Q ss_pred             --ccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCH
Q psy18060        285 --APELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSW  362 (549)
Q Consensus       285 --APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~  362 (549)
                        +|+......+..++|++|||..+.+.++|...-.....   ...|..+.....+..+..++.+.+.++.+++..||.+
T Consensus       432 p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~  508 (524)
T KOG0601|consen  432 PIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSA  508 (524)
T ss_pred             ccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccCCCchHHhhhhhhhhhcCCccccchhh
Confidence              55556677889999999999999999998743222221   1223445555556666899999999999999999999


Q ss_pred             HHHhcCcccC
Q psy18060        363 PELLHHPLVK  372 (549)
Q Consensus       363 ~elL~Hpw~~  372 (549)
                      .++..|+=|.
T Consensus       509 ~~l~~~~~~~  518 (524)
T KOG0601|consen  509 VELSLHSEFY  518 (524)
T ss_pred             hhhcccchhh
Confidence            9988886553


No 429
>KOG0576|consensus
Probab=99.76  E-value=9.2e-21  Score=201.41  Aligned_cols=349  Identities=19%  Similarity=0.260  Sum_probs=243.4

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehh
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI   86 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv   86 (549)
                      .-++|+.+..+|+|+||.||||+++.+++..|+|.++....  .....+.+||-+++..+|||||.|++.+.....+++.
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            34689999999999999999999999999999999976532  2345677899999999999999999999999999999


Q ss_pred             hhhhh-cccccC--------------------------------------------------------------------
Q psy18060         87 TEFAH-MSLSKL--------------------------------------------------------------------   97 (549)
Q Consensus        87 ~ey~~-~sLskl--------------------------------------------------------------------   97 (549)
                      ||||. +||..+                                                                    
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk  170 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK  170 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhh
Confidence            99994 233221                                                                    


Q ss_pred             ---CCCccc--------------cCCCc--------------------------cccc-------cccccccceeEEEEE
Q psy18060         98 ---GEPWFH--------------NHCQP--------------------------VKME-------KSNGALEKYQKICLI  127 (549)
Q Consensus        98 ---g~p~~~--------------~~~~~--------------------------~~~~-------~~~~~~~~y~~~~~i  127 (549)
                         |.|++-              ..|+-                          +-|.       .-.....-+......
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~f  250 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNF  250 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHH
Confidence               111110              00000                          0000       000111122333447


Q ss_pred             ecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCC-eeEEEEEEeeCCEEEEEEecCCCC--H
Q psy18060        128 GEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN-IIKFIASHETLNEFVLITEFAHMS--L  204 (549)
Q Consensus       128 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn-Iv~l~~~~~~~~~~~iV~E~~~gs--L  204 (549)
                      ++|++++++|.+...+...+ .+.+...       -...-++++|.+++||| .+..++.++.++...++|+++.+.  .
T Consensus       251 vK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~  322 (829)
T KOG0576|consen  251 VKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSS  322 (829)
T ss_pred             HHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccc
Confidence            78888888888777655544 6666443       23456788999999999 777778888888899999999743  1


Q ss_pred             HHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCcc
Q psy18060        205 SNLL-EQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLY  283 (549)
Q Consensus       205 ~~~l-~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y  283 (549)
                      .... ...-.+.+.+...+.+.-..+|++||+..=+|||    ||+.++ +.++.+|||.+..+.... ..++..+|+.+
T Consensus       323 ~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~t~~~~~~~  396 (829)
T KOG0576|consen  323 ALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPRTAIGTPEP  396 (829)
T ss_pred             cccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-ccccCCCCCCC
Confidence            1111 0111244455566677778899999998778999    777755 679999999987765443 45667899999


Q ss_pred             cccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-----ccCCHHHH-HHHHHhchhCcC
Q psy18060        284 MAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTVSILHLIRLLKTQDVTFP-----SQVSETYK-DLVKGLLEKDAS  357 (549)
Q Consensus       284 ~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~~~~~~~~~i~~~~~~~p-----~~~s~~~~-dlI~~~L~~dP~  357 (549)
                      +|||+.....+....|.|++|+-..++.-|-+|-...  ......+..++ .-|     ..+++... ++...|+...|.
T Consensus       397 ~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p-~s~~L~~~~aw~~~~~~~~~~~~~~g~P~  473 (829)
T KOG0576|consen  397 LAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGNGP-NSPMLTDKSAWSPVFHRDFPAPCLNGLPP  473 (829)
T ss_pred             CCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCCCC-CccccchhhhcCcccccCCcccccCCCCC
Confidence            9999999999999999999999888888887775441  11111111111 000     11222222 488889999999


Q ss_pred             CCCCHHHHhcCcccCcc
Q psy18060        358 QRLSWPELLHHPLVKDN  374 (549)
Q Consensus       358 ~Rps~~elL~Hpw~~~~  374 (549)
                      .|+....++.|.+|...
T Consensus       474 ~pkv~mgacfsKvfngC  490 (829)
T KOG0576|consen  474 TPKVHMGACFSKVFNGC  490 (829)
T ss_pred             CCcchhhHHHHHHhccC
Confidence            99999999998888653


No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.74  E-value=1.9e-17  Score=158.88  Aligned_cols=132  Identities=16%  Similarity=0.262  Sum_probs=103.7

Q ss_pred             EEecCCcEEEEEEEEcCCCceEEEEEEecCCC-Ch-----HHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEec
Q psy18060        126 LIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SG-----KELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEF  199 (549)
Q Consensus       126 ~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~  199 (549)
                      .||+|+||.||+|..  ++..+++|....... ..     .....+.+|+++++.+.|+++......+...+..+++|||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            379999999999984  478899998654321 11     1235677899999999888755444344455567899999


Q ss_pred             CCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        200 AHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       200 ~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                      ++| +|.+++.....       .++.|++.+|.+||+.|++|||++|.||+++ ++.++++|||+++..
T Consensus        79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            985 78888765321       7899999999999999999999999999999 889999999998653


No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73  E-value=2.2e-17  Score=158.85  Aligned_cols=138  Identities=20%  Similarity=0.165  Sum_probs=107.1

Q ss_pred             eeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChH--------------------HHHHHHHHHHHHHhcCCC--
Q psy18060        121 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK--------------------ELSSLKQECEIQKHLAHP--  178 (549)
Q Consensus       121 y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--------------------~~~~~~~Ei~il~~l~hp--  178 (549)
                      |.+.+.||+|+||.||++... +|+.+|||++........                    .......|..++..+.++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            677889999999999999875 699999999765331100                    112356788889888777  


Q ss_pred             CeeEEEEEEeeCCEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEE
Q psy18060        179 NIIKFIASHETLNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAM  257 (549)
Q Consensus       179 nIv~l~~~~~~~~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vK  257 (549)
                      .++..++.    ...+++|||++| +|......      .....++.+++.++.++|+.||+||||||+||+++.++.++
T Consensus        96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~  165 (198)
T cd05144          96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY  165 (198)
T ss_pred             CCCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence            44555542    345899999986 66654321      34567889999999999999999999999999999999999


Q ss_pred             Eeecccceeccc
Q psy18060        258 LCDFGFARSMAV  269 (549)
Q Consensus       258 L~DFGla~~~~~  269 (549)
                      |+|||++.....
T Consensus       166 liDfg~~~~~~~  177 (198)
T cd05144         166 IIDWPQMVSTDH  177 (198)
T ss_pred             EEECCccccCCC
Confidence            999999865543


No 432
>KOG1023|consensus
Probab=99.72  E-value=2.6e-17  Score=175.29  Aligned_cols=196  Identities=27%  Similarity=0.370  Sum_probs=155.9

Q ss_pred             HHhcCCCCeeEEEEEEeeCCEEEEEEecCC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCC-ccccccCCcE
Q psy18060        172 QKHLAHPNIIKFIASHETLNEFVLITEFAH-MSLSNLLEQ-RKKLSETICVQILSNLISALYYLHSNRV-LHRDLKPQNV  248 (549)
Q Consensus       172 l~~l~hpnIv~l~~~~~~~~~~~iV~E~~~-gsL~~~l~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gI-iHrDIKP~NI  248 (549)
                      |+.+.|.|+.+|++.+.+....++|.+||. |+|.+.+.. ...+++.....++++|+.||+|||+..| .|+.+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            356889999999999999999999999998 899999987 4568888889999999999999999866 9999999999


Q ss_pred             EEecCCcEEEeecccceeccc--CcccccccCCCCcccccccccCCC-------CCcchhhHHHHHHHHHHHhCCCCCCC
Q psy18060        249 LLNKDGVAMLCDFGFARSMAV--GTHMLTSIKGTPLYMAPELIAERP-------YDHTADLWSLGCIAYEIHMGHPPFKT  319 (549)
Q Consensus       249 Ll~~~g~vKL~DFGla~~~~~--~~~~~~~~~GT~~Y~APE~l~~~~-------y~~ksDIwSlGvil~eLltG~~Pf~~  319 (549)
                      +++..-.+||+|||+......  .........-...|.|||.+....       -+.+.||||+|++++|+++...||..
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            999999999999999866532  111111122345599999997632       46679999999999999999999975


Q ss_pred             C----CHHHHHHHHhc-CCC-CCCc-----cCCHHHHHHHHHhchhCcCCCCCHHHHhc
Q psy18060        320 V----SILHLIRLLKT-QDV-TFPS-----QVSETYKDLVKGLLEKDASQRLSWPELLH  367 (549)
Q Consensus       320 ~----~~~~~~~~i~~-~~~-~~p~-----~~s~~~~dlI~~~L~~dP~~Rps~~elL~  367 (549)
                      .    .+.+++..+.. +.. ..|.     ..++++..++..||..+|..||+++++-.
T Consensus       161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             ccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            2    33456666655 322 1221     34567889999999999999999988743


No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71  E-value=1.3e-16  Score=176.36  Aligned_cols=141  Identities=18%  Similarity=0.250  Sum_probs=111.3

Q ss_pred             ccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCC-CCh-----HHHHHHHHHHHHHHhcCCCCeeEEEEEEee
Q psy18060        116 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSG-----KELSSLKQECEIQKHLAHPNIIKFIASHET  189 (549)
Q Consensus       116 ~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~-----~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~  189 (549)
                      .....|...+.||+|+||.||++....  ..+++|...... ...     .....+.+|+++++.++|++++....++..
T Consensus       330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~  407 (535)
T PRK09605        330 EVKRRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD  407 (535)
T ss_pred             ccccccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence            334556678999999999999998754  344555432211 111     123567899999999999999887777666


Q ss_pred             CCEEEEEEecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceec
Q psy18060        190 LNEFVLITEFAHM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSM  267 (549)
Q Consensus       190 ~~~~~iV~E~~~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~  267 (549)
                      ....++||||++| +|.+++.        ....++.|++.+|.+||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            6678899999985 8988875        356789999999999999999999999999999 6789999999998653


No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68  E-value=2.2e-16  Score=149.83  Aligned_cols=137  Identities=23%  Similarity=0.244  Sum_probs=98.7

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHH----------------------HHHHHHHHHhcCCC--C
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSS----------------------LKQECEIQKHLAHP--N  179 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~----------------------~~~Ei~il~~l~hp--n  179 (549)
                      .+.||+|+||.||+|.+. +++.||||++............                      ...|...+..+.+.  .
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999877 7899999998754322111111                      13566666666443  2


Q ss_pred             eeEEEEEEeeCCEEEEEEecCCC-CHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCCccccccCCcEEEecCCcE
Q psy18060        180 IIKFIASHETLNEFVLITEFAHM-SLS-NLLEQRKKLSETICVQILSNLISALYYLHS-NRVLHRDLKPQNVLLNKDGVA  256 (549)
Q Consensus       180 Iv~l~~~~~~~~~~~iV~E~~~g-sL~-~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~-~gIiHrDIKP~NILl~~~g~v  256 (549)
                      +++.++..    ..+++|||++| ++. ..+.... .. ..+..++.+++.++.++|. .||+||||||+||+++ ++.+
T Consensus        81 ~~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~  153 (187)
T cd05119          81 VPKPIDLN----RHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV  153 (187)
T ss_pred             CCceEecC----CCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence            45555432    35899999986 221 2222111 11 6678899999999999999 9999999999999999 8999


Q ss_pred             EEeecccceecc
Q psy18060        257 MLCDFGFARSMA  268 (549)
Q Consensus       257 KL~DFGla~~~~  268 (549)
                      +|+|||.+....
T Consensus       154 ~liDfg~a~~~~  165 (187)
T cd05119         154 YIIDVPQAVEID  165 (187)
T ss_pred             EEEECccccccc
Confidence            999999986554


No 435
>KOG0601|consensus
Probab=99.66  E-value=7e-17  Score=172.21  Aligned_cols=254  Identities=23%  Similarity=0.285  Sum_probs=197.7

Q ss_pred             cceeEEEEEec--CCcEEEEEEEE--cCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhc-CCCCeeEEEEEEeeCCEE
Q psy18060        119 EKYQKICLIGE--GSFGKVFKAIH--LDLKKTVALKIISKSGRSGKELSSLKQECEIQKHL-AHPNIIKFIASHETLNEF  193 (549)
Q Consensus       119 ~~y~~~~~iG~--G~fg~Vy~~~~--~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~~  193 (549)
                      +.+.+...+|.  |.+|.||.+..  ..++..+|+|.-......+.....-.+|..-..++ .|+|.++.+..++..+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            45777888999  99999999988  88899999998544332222222234455555555 599999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHhCCCccccccCCcEEEecC-CcEEEeecccceec
Q psy18060        194 VLITEFAHMSLSNLLEQRKK-LSETICVQILSNLIS----ALYYLHSNRVLHRDLKPQNVLLNKD-GVAMLCDFGFARSM  267 (549)
Q Consensus       194 ~iV~E~~~gsL~~~l~~~~~-l~e~~~~~i~~qIl~----aL~yLH~~gIiHrDIKP~NILl~~~-g~vKL~DFGla~~~  267 (549)
                      ++.+|+|+.+|..+...... +++..++..+.+...    ||.++|+.+++|-|+||.||++..+ ...+++|||+...+
T Consensus       194 fiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i  273 (524)
T KOG0601|consen  194 FIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI  273 (524)
T ss_pred             eeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEc
Confidence            99999999999888877655 889999999999999    9999999999999999999999999 78999999999887


Q ss_pred             ccCccccc-----ccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhcCCCCCCccC
Q psy18060        268 AVGTHMLT-----SIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV--SILHLIRLLKTQDVTFPSQV  340 (549)
Q Consensus       268 ~~~~~~~~-----~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~--~~~~~~~~i~~~~~~~p~~~  340 (549)
                      ..+.....     ...|...|++||.+.+. ++.+.|++|+|.+..+..+|..+....  +....++... -+.++-...
T Consensus       274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-ip~e~~~~~  351 (524)
T KOG0601|consen  274 SDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-IPLEFCEGG  351 (524)
T ss_pred             cCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-CchhhhcCc
Confidence            76542222     22578889999988764 789999999999999999887766544  2222211111 011122334


Q ss_pred             CHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        341 SETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       341 s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      +..+...+..|++.+|..|++++.++.|+++...
T Consensus       352 s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  352 SSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             chhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence            5666679999999999999999999999999854


No 436
>KOG0606|consensus
Probab=99.65  E-value=4.1e-17  Score=181.84  Aligned_cols=270  Identities=24%  Similarity=0.357  Sum_probs=217.3

Q ss_pred             ccccccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCE
Q psy18060        114 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE  192 (549)
Q Consensus       114 ~~~~~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  192 (549)
                      .....+.+.+.+-+-+|+++.+..+.-..+|...++|+...... -....+....+-.++-...+|.++.....+.....
T Consensus       799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP  878 (1205)
T KOG0606|consen  799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP  878 (1205)
T ss_pred             ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence            44677888999999999999999988888887777766543211 11112233344444444567888877766667788


Q ss_pred             EEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccceecccC-
Q psy18060        193 FVLITEFAH-MSLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG-  270 (549)
Q Consensus       193 ~~iV~E~~~-gsL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~-  270 (549)
                      .+++++|.+ ++|...+...+..++.-++..+..+.++++|||+..+.|||++|.|+++..+|..+++|||.....+.- 
T Consensus       879 ~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~  958 (1205)
T KOG0606|consen  879 LPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP  958 (1205)
T ss_pred             cchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence            999999997 589999888888888888999999999999999999999999999999999999999999844321100 


Q ss_pred             ---------c---------------------ccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q psy18060        271 ---------T---------------------HMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMGHPPFKTV  320 (549)
Q Consensus       271 ---------~---------------------~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG~~Pf~~~  320 (549)
                               .                     .......||+.|.+||.+.+......+|+|++|++++|.++|.+||...
T Consensus       959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen  959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence                     0                     0012346899999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHhchhCcCCCCCHH---HHhcCcccCcccchhhhhcc
Q psy18060        321 SILHLIRLLKTQDVTFPS---QVSETYKDLVKGLLEKDASQRLSWP---ELLHHPLVKDNLSSEIESQN  383 (549)
Q Consensus       321 ~~~~~~~~i~~~~~~~p~---~~s~~~~dlI~~~L~~dP~~Rps~~---elL~Hpw~~~~~~~~~~~~~  383 (549)
                      .+.+..+.|.......|.   ..+.++++++.+.|..+|.+|.++.   ++-.||||++..+..+..+.
T Consensus      1039 tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred             chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcccccccc
Confidence            999999999888777664   5789999999999999999999987   99999999988776555443


No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.63  E-value=3.4e-15  Score=148.02  Aligned_cols=135  Identities=22%  Similarity=0.257  Sum_probs=103.5

Q ss_pred             EEEe-cCCcEEEEEEEEcCCCceEEEEEEecCCC-----------ChHHHHHHHHHHHHHHhcCCCCe--eEEEEEEeeC
Q psy18060        125 CLIG-EGSFGKVFKAIHLDLKKTVALKIISKSGR-----------SGKELSSLKQECEIQKHLAHPNI--IKFIASHETL  190 (549)
Q Consensus       125 ~~iG-~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-----------~~~~~~~~~~Ei~il~~l~hpnI--v~l~~~~~~~  190 (549)
                      ..|| .||.|+||.+...  +..+++|.......           +......+.+|+.++..+.|++|  +..++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            4677 7888888888664  77899998854321           11223567889999999998875  6666654332


Q ss_pred             -C---EEEEEEecCCC--CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeecccc
Q psy18060        191 -N---EFVLITEFAHM--SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFA  264 (549)
Q Consensus       191 -~---~~~iV~E~~~g--sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla  264 (549)
                       .   ..++|||+++|  +|.+++.. ..+++..    +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~  189 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG  189 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence             2   23599999985  78888765 4566543    568999999999999999999999999999999999999987


Q ss_pred             ee
Q psy18060        265 RS  266 (549)
Q Consensus       265 ~~  266 (549)
                      +.
T Consensus       190 ~~  191 (239)
T PRK01723        190 EL  191 (239)
T ss_pred             cc
Confidence            54


No 438
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.62  E-value=1.7e-15  Score=136.56  Aligned_cols=131  Identities=26%  Similarity=0.286  Sum_probs=109.5

Q ss_pred             EEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCC--CCeeEEEEEEeeCCEEEEEEecC
Q psy18060        123 KICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAH--PNIIKFIASHETLNEFVLITEFA  200 (549)
Q Consensus       123 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h--pnIv~l~~~~~~~~~~~iV~E~~  200 (549)
                      +++.||+|+++.||++....  ..+++|.......    ...+.+|+.+++.+.+  +++++++.+....+..+++||++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            45789999999999998753  7899999865432    3567889999999976  58999999888778899999999


Q ss_pred             CC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        201 HM-SLSNLLEQRKKLSETICVQILSNLISALYYLHSN---RVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       201 ~g-sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      .| .+..+       +......++.+++.+|.+||..   +++||||+|+||+++..+.+++.|||.++.
T Consensus        76 ~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          76 EGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             CCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            86 34432       5566677899999999999985   799999999999999989999999998864


No 439
>KOG0595|consensus
Probab=99.60  E-value=8.8e-16  Score=156.37  Aligned_cols=93  Identities=31%  Similarity=0.412  Sum_probs=84.9

Q ss_pred             cccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         5 ~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      .....+|...+.||+|+||+||+|+++.++..||||.|.++....+..+.+..||++|++++|||||.++++.++.+.+|
T Consensus         6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            35677899999999999999999999999999999999988777777788999999999999999999999999999999


Q ss_pred             hhhhhhh-cccccC
Q psy18060         85 LITEFAH-MSLSKL   97 (549)
Q Consensus        85 lv~ey~~-~sLskl   97 (549)
                      +|||||. ++|+.+
T Consensus        86 lVMEyC~gGDLs~y   99 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDY   99 (429)
T ss_pred             EEEEeCCCCCHHHH
Confidence            9999997 677643


No 440
>KOG0600|consensus
Probab=99.53  E-value=2.9e-15  Score=155.90  Aligned_cols=93  Identities=32%  Similarity=0.433  Sum_probs=83.2

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccc--ccee
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL--NEFV   84 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~~   84 (549)
                      ..+.|+.++.||+|+||.||+|++..||+.||+|++..............|||.||++|+|||||+|.+...+.  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            35679999999999999999999999999999999998776666667889999999999999999999988766  6899


Q ss_pred             hhhhhhhcccccCCC
Q psy18060         85 LITEFAHMSLSKLGE   99 (549)
Q Consensus        85 lv~ey~~~sLsklg~   99 (549)
                      +|+||+..+|+.+..
T Consensus       195 lVFeYMdhDL~GLl~  209 (560)
T KOG0600|consen  195 LVFEYMDHDLSGLLS  209 (560)
T ss_pred             EEEecccchhhhhhc
Confidence            999999999887754


No 441
>KOG0659|consensus
Probab=99.52  E-value=8.8e-15  Score=141.62  Aligned_cols=90  Identities=29%  Similarity=0.475  Sum_probs=80.6

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      +.+|..++.||+|+||.||+|++..||+.||||+|+........-....|||++|+.++|||||.+.++|.+...+.+|+
T Consensus         1 ~~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    1 MDRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             CchhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            35799999999999999999999999999999999877654444467889999999999999999999999999999999


Q ss_pred             hhhhcccccC
Q psy18060         88 EFAHMSLSKL   97 (549)
Q Consensus        88 ey~~~sLskl   97 (549)
                      ||+..+|...
T Consensus        81 Efm~tdLe~v   90 (318)
T KOG0659|consen   81 EFMPTDLEVV   90 (318)
T ss_pred             EeccccHHHH
Confidence            9998877554


No 442
>KOG0593|consensus
Probab=99.51  E-value=7.3e-15  Score=144.43  Aligned_cols=86  Identities=28%  Similarity=0.429  Sum_probs=76.6

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      |++|+.+-++|+|+||+||||+++.||+.||||+.--+..+....+-.+|||++|++|+|||+|++.++|.....+++|+
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            68899999999999999999999999999999998654444444455789999999999999999999999999999999


Q ss_pred             hhhhcc
Q psy18060         88 EFAHMS   93 (549)
Q Consensus        88 ey~~~s   93 (549)
                      |||..+
T Consensus        81 E~~dhT   86 (396)
T KOG0593|consen   81 EYCDHT   86 (396)
T ss_pred             eecchH
Confidence            999654


No 443
>KOG0597|consensus
Probab=99.51  E-value=8.7e-15  Score=153.75  Aligned_cols=90  Identities=42%  Similarity=0.661  Sum_probs=85.8

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      |++|-+.+.||+|+||+||||+.+.|++.||||.|.|.....+++..+.+|++|+++|+|||||.++++|++...+++|.
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            57899999999999999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             hhhhcccccC
Q psy18060         88 EFAHMSLSKL   97 (549)
Q Consensus        88 ey~~~sLskl   97 (549)
                      ||+.|+|..+
T Consensus        81 e~a~g~L~~i   90 (808)
T KOG0597|consen   81 EYAVGDLFTI   90 (808)
T ss_pred             hhhhhhHHHH
Confidence            9999988654


No 444
>KOG0591|consensus
Probab=99.50  E-value=2.7e-15  Score=146.13  Aligned_cols=92  Identities=36%  Similarity=0.449  Sum_probs=82.6

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccc-ccccccc-e
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIA-SHETLNE-F   83 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~~-~   83 (549)
                      ..+.+|+++++||+|+||.||+|++..+|+.||.|.|.....+.++++.+..||.+|++|+|||||++++ .|.+.+. +
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            4567799999999999999999999999999999999876678888889999999999999999999998 7777766 9


Q ss_pred             ehhhhhh-hcccccC
Q psy18060         84 VLITEFA-HMSLSKL   97 (549)
Q Consensus        84 ~lv~ey~-~~sLskl   97 (549)
                      +++||+| +++|+..
T Consensus        96 nivmE~c~~GDLsqm  110 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQM  110 (375)
T ss_pred             HHHHHhhcccCHHHH
Confidence            9999999 5777664


No 445
>KOG0598|consensus
Probab=99.49  E-value=1.7e-14  Score=145.68  Aligned_cols=87  Identities=31%  Similarity=0.484  Sum_probs=80.4

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      ...++|+++++||+|+||+||.++.+.|++.||+|+|+|+.. ..++.+....|..||.+++||+||+++.+|++...+|
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLy  101 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLY  101 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEE
Confidence            457899999999999999999999999999999999998874 4457788999999999999999999999999999999


Q ss_pred             hhhhhhhc
Q psy18060         85 LITEFAHM   92 (549)
Q Consensus        85 lv~ey~~~   92 (549)
                      +|+||..+
T Consensus       102 lVld~~~G  109 (357)
T KOG0598|consen  102 LVLDYLNG  109 (357)
T ss_pred             EEEeccCC
Confidence            99999864


No 446
>KOG0605|consensus
Probab=99.46  E-value=4.3e-14  Score=148.35  Aligned_cols=87  Identities=25%  Similarity=0.386  Sum_probs=80.6

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      ...++|+++++||+||||.||+|+-+.||+.||+|+++|+.+ ...+++.++.|..||...++|+||+||.+|++...+|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            357899999999999999999999999999999999998874 4567789999999999999999999999999999999


Q ss_pred             hhhhhhhc
Q psy18060         85 LITEFAHM   92 (549)
Q Consensus        85 lv~ey~~~   92 (549)
                      +||||.+|
T Consensus       218 LiMEylPG  225 (550)
T KOG0605|consen  218 LIMEYLPG  225 (550)
T ss_pred             EEEEecCC
Confidence            99999964


No 447
>KOG0575|consensus
Probab=99.43  E-value=1.4e-13  Score=146.63  Aligned_cols=88  Identities=31%  Similarity=0.529  Sum_probs=79.0

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ..|+..+.||+|||+.||.+++..+|+.||+|+|+++.. .....+.+.+||+|+++|+|||||+++++|++.+++|+|.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            459999999999999999999999999999999998763 4456788999999999999999999999999999999999


Q ss_pred             hhhh-ccccc
Q psy18060         88 EFAH-MSLSK   96 (549)
Q Consensus        88 ey~~-~sLsk   96 (549)
                      |+|+ ++|..
T Consensus        98 ELC~~~sL~e  107 (592)
T KOG0575|consen   98 ELCHRGSLME  107 (592)
T ss_pred             EecCCccHHH
Confidence            9995 44433


No 448
>KOG0615|consensus
Probab=99.42  E-value=1.9e-13  Score=139.49  Aligned_cols=84  Identities=31%  Similarity=0.433  Sum_probs=73.2

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChh-----hhhhHHHHHHHHHhcCCCCccccccccccccce
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-----ELSSLKQECEIQKHLAHPNIIKFIASHETLNEF   83 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~   83 (549)
                      +.|.+.+.||+|+||.|.+|..+.||+.||||+|++......     -...+.+|++||++|+|||||++++.|+.....
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            457889999999999999999999999999999988764321     123467999999999999999999999999999


Q ss_pred             ehhhhhhhc
Q psy18060         84 VLITEFAHM   92 (549)
Q Consensus        84 ~lv~ey~~~   92 (549)
                      |+||||+.+
T Consensus       252 YmVlE~v~G  260 (475)
T KOG0615|consen  252 YMVLEYVEG  260 (475)
T ss_pred             EEEEEEecC
Confidence            999999853


No 449
>KOG1243|consensus
Probab=99.41  E-value=3.7e-12  Score=137.65  Aligned_cols=169  Identities=21%  Similarity=0.298  Sum_probs=128.5

Q ss_pred             EEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEecCCCCHHHHHHhcCCCCH
Q psy18060        137 KAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFAHMSLSNLLEQRKKLSE  216 (549)
Q Consensus       137 ~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E~~~gsL~~~l~~~~~l~e  216 (549)
                      .|..+.++..+.|...+....  .......+-++-++.++||||+++++.++..+.+|||+|-+. .|..++++.+   .
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~-Pl~~~lk~l~---~  103 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR-PLETVLKELG---K  103 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc-cHHHHHHHhH---H
Confidence            466677788888888865433  334567788899999999999999999999999999999874 4556665533   6


Q ss_pred             HHHHHHHHHHHHHHHHHH-hCCCccccccCCcEEEecCCcEEEeecccceecccCcccccccCCCCcccccccccCCCCC
Q psy18060        217 TICVQILSNLISALYYLH-SNRVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD  295 (549)
Q Consensus       217 ~~~~~i~~qIl~aL~yLH-~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~  295 (549)
                      .....-+.||+.||.+|| ..+++|++|.-.-|+++..|.+||++|-++..............---.|..|+.+....  
T Consensus       104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--  181 (690)
T KOG1243|consen  104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--  181 (690)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--
Confidence            677788999999999998 56899999999999999999999999998754432211111111122356666543322  


Q ss_pred             cchhhHHHHHHHHHHHhC
Q psy18060        296 HTADLWSLGCIAYEIHMG  313 (549)
Q Consensus       296 ~ksDIwSlGvil~eLltG  313 (549)
                      -..|.|-|||++++++.|
T Consensus       182 ~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cchhhhhHHHHHHHHhCc
Confidence            457999999999999998


No 450
>KOG0661|consensus
Probab=99.41  E-value=3.4e-14  Score=147.07  Aligned_cols=91  Identities=29%  Similarity=0.393  Sum_probs=82.5

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcC-CCCcccccccccccc-ce
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLA-HPNIIKFIASHETLN-EF   83 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~-~~   83 (549)
                      ..+++|.+++.||.|+||.||+|+.+.+|+.||||+++++..+.++... +||++.|++|+ |||||++++++.+.. .+
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            5678999999999999999999999999999999999888777666555 48999999999 999999999998877 99


Q ss_pred             ehhhhhhhcccccC
Q psy18060         84 VLITEFAHMSLSKL   97 (549)
Q Consensus        84 ~lv~ey~~~sLskl   97 (549)
                      ++||||+.++|..+
T Consensus        86 ~fVfE~Md~NLYqL   99 (538)
T KOG0661|consen   86 YFVFEFMDCNLYQL   99 (538)
T ss_pred             eeeHHhhhhhHHHH
Confidence            99999999998765


No 451
>KOG0662|consensus
Probab=99.41  E-value=9.2e-14  Score=127.40  Aligned_cols=90  Identities=32%  Similarity=0.459  Sum_probs=82.6

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      +.+|...+.||+|+||+||+|+++.|++.||+|.++....++......+|||.+|+.|+|.|||+++++......+.+|+
T Consensus         1 m~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    1 MQKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             CcchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence            45788999999999999999999999999999999887766666778899999999999999999999999999999999


Q ss_pred             hhhhcccccC
Q psy18060         88 EFAHMSLSKL   97 (549)
Q Consensus        88 ey~~~sLskl   97 (549)
                      +||+.+|.|+
T Consensus        81 e~cdqdlkky   90 (292)
T KOG0662|consen   81 EFCDQDLKKY   90 (292)
T ss_pred             HHhhHHHHHH
Confidence            9999888765


No 452
>KOG0663|consensus
Probab=99.40  E-value=1.1e-13  Score=137.78  Aligned_cols=91  Identities=23%  Similarity=0.375  Sum_probs=78.3

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccc--ccccee
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHE--TLNEFV   84 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~--~~~~~~   84 (549)
                      ..++|+.+..|++|+||.||+|+++.|++.||+|+++.........-..+|||.+|.+++|||||.+..+..  +.+.+|
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence            457899999999999999999999999999999999877644444456789999999999999999988763  456799


Q ss_pred             hhhhhhhcccccC
Q psy18060         85 LITEFAHMSLSKL   97 (549)
Q Consensus        85 lv~ey~~~sLskl   97 (549)
                      +||||+..+|..+
T Consensus       154 ~VMe~~EhDLksl  166 (419)
T KOG0663|consen  154 IVMEYVEHDLKSL  166 (419)
T ss_pred             eeHHHHHhhHHHH
Confidence            9999999888665


No 453
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39  E-value=2.3e-12  Score=138.67  Aligned_cols=139  Identities=23%  Similarity=0.309  Sum_probs=95.2

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEEEecCCCCh----------------------------HHH----------HHHH
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG----------------------------KEL----------SSLK  166 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~----------------------------~~~----------~~~~  166 (549)
                      +.||.|++|.||+|..+ +|+.||||+........                            ...          -.+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            67999999999999875 58999999986432100                            000          0133


Q ss_pred             HHHHHHHhc----C-CCCe--eEEEEEEeeCCEEEEEEecCCC-CHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhC
Q psy18060        167 QECEIQKHL----A-HPNI--IKFIASHETLNEFVLITEFAHM-SLSNLLEQR-KKLSETICVQILSNLIS-ALYYLHSN  236 (549)
Q Consensus       167 ~Ei~il~~l----~-hpnI--v~l~~~~~~~~~~~iV~E~~~g-sL~~~l~~~-~~l~e~~~~~i~~qIl~-aL~yLH~~  236 (549)
                      +|++.+.++    . +|+|  ++.+.  ......+|||||++| +|.+..... ....   ...++.+++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence            455555544    2 3433  23332  223346899999986 677765432 1222   2345556655 47889999


Q ss_pred             CCccccccCCcEEEecCCcEEEeecccceeccc
Q psy18060        237 RVLHRDLKPQNVLLNKDGVAMLCDFGFARSMAV  269 (549)
Q Consensus       237 gIiHrDIKP~NILl~~~g~vKL~DFGla~~~~~  269 (549)
                      |++|+|+||.||+++.+|.++++|||++.....
T Consensus       277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            999999999999999999999999999987754


No 454
>KOG1266|consensus
Probab=99.39  E-value=5e-13  Score=132.99  Aligned_cols=200  Identities=20%  Similarity=0.270  Sum_probs=143.5

Q ss_pred             HHHhcCCCCeeEEEEEEeeC-----CEEEEEEecCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC--CC
Q psy18060        171 IQKHLAHPNIIKFIASHETL-----NEFVLITEFAH-MSLSNLLEQ----RKKLSETICVQILSNLISALYYLHSN--RV  238 (549)
Q Consensus       171 il~~l~hpnIv~l~~~~~~~-----~~~~iV~E~~~-gsL~~~l~~----~~~l~e~~~~~i~~qIl~aL~yLH~~--gI  238 (549)
                      -+-++.|.|||+++.++.+.     ....++.||+. |+|..+|++    ...+.....++|+-||+.||.|||+.  .|
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi  199 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence            34456799999998877543     34678899987 789988875    34588888999999999999999987  59


Q ss_pred             ccccccCCcEEEecCCcEEEeecccceecccC-----cccccccCCCCcccccccccCCCCCcchhhHHHHHHHHHHHhC
Q psy18060        239 LHRDLKPQNVLLNKDGVAMLCDFGFARSMAVG-----THMLTSIKGTPLYMAPELIAERPYDHTADLWSLGCIAYEIHMG  313 (549)
Q Consensus       239 iHrDIKP~NILl~~~g~vKL~DFGla~~~~~~-----~~~~~~~~GT~~Y~APE~l~~~~y~~ksDIwSlGvil~eLltG  313 (549)
                      +|+++...-|++..+|.+||+--.... ..+.     ........|-++|.|||.-...+.+.++|||++|....+|..|
T Consensus       200 ihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail  278 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL  278 (458)
T ss_pred             ccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence            999999999999999999985322211 1100     0011123467889999988777888999999999999999887


Q ss_pred             CCCC-CCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHhchhCcCCCCCHHHHhcCcccCcc
Q psy18060        314 HPPF-KTVSILHLIRLLKTQDVTFPSQVSETYKDLVKGLLEKDASQRLSWPELLHHPLVKDN  374 (549)
Q Consensus       314 ~~Pf-~~~~~~~~~~~i~~~~~~~p~~~s~~~~dlI~~~L~~dP~~Rps~~elL~Hpw~~~~  374 (549)
                      ..-- .+.+....-..+....+-+.   ..--++++.+||+..|+.||++.+++.||.+-+.
T Consensus       279 Eiq~tnseS~~~~ee~ia~~i~~le---n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV  337 (458)
T KOG1266|consen  279 EIQSTNSESKVEVEENIANVIIGLE---NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV  337 (458)
T ss_pred             eeccCCCcceeehhhhhhhheeecc---CccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence            6432 22211111112211111111   1223478999999999999999999999988654


No 455
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.38  E-value=5e-13  Score=145.89  Aligned_cols=144  Identities=17%  Similarity=0.223  Sum_probs=96.9

Q ss_pred             ccceeEEEEEecCCcEEEEEEEEcCCCceEEEEEEecCCC---------------------------C-h----HHHHH-
Q psy18060        118 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR---------------------------S-G----KELSS-  164 (549)
Q Consensus       118 ~~~y~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---------------------------~-~----~~~~~-  164 (549)
                      ...|.. +.||+|++|.||+|..+.+|+.||||+..+.-.                           . .    +-... 
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            456776 789999999999999998899999999975310                           0 0    00111 


Q ss_pred             -----HHHHHHHHHhc----CCCCeeEEEEEEee-CCEEEEEEecCCC-CHHHH--HHhcC----CCCHHHHHHHHHHHH
Q psy18060        165 -----LKQECEIQKHL----AHPNIIKFIASHET-LNEFVLITEFAHM-SLSNL--LEQRK----KLSETICVQILSNLI  227 (549)
Q Consensus       165 -----~~~Ei~il~~l----~hpnIv~l~~~~~~-~~~~~iV~E~~~g-sL~~~--l~~~~----~l~e~~~~~i~~qIl  227 (549)
                           +.+|+..+.++    .+.+.+.+-.++.+ ....+|||||+.| .+.+.  +...+    .+.+..+..++.|++
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                 23344444443    24333333333322 3456899999986 67664  33332    244444555555554


Q ss_pred             HHHHHHHhCCCccccccCCcEEEecCC----cEEEeecccceeccc
Q psy18060        228 SALYYLHSNRVLHRDLKPQNVLLNKDG----VAMLCDFGFARSMAV  269 (549)
Q Consensus       228 ~aL~yLH~~gIiHrDIKP~NILl~~~g----~vKL~DFGla~~~~~  269 (549)
                             ..|++|+|+||.||+++.+|    .++++|||++.....
T Consensus       278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                   58999999999999999888    999999999987754


No 456
>KOG0611|consensus
Probab=99.37  E-value=1.4e-13  Score=139.76  Aligned_cols=83  Identities=30%  Similarity=0.512  Sum_probs=77.1

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      .+|++.+.||+|+||+|-+|+....|+.||||-|++... ++.++..++|||+||+.|+|||||.+|++|+..+.+.+||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            469999999999999999999999999999999998774 5557788999999999999999999999999999999999


Q ss_pred             hhhh
Q psy18060         88 EFAH   91 (549)
Q Consensus        88 ey~~   91 (549)
                      ||..
T Consensus       133 EYaS  136 (668)
T KOG0611|consen  133 EYAS  136 (668)
T ss_pred             EecC
Confidence            9974


No 457
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.32  E-value=1.6e-11  Score=117.48  Aligned_cols=139  Identities=17%  Similarity=0.173  Sum_probs=101.1

Q ss_pred             EEEecCCcEEEEEEEEcC------CCceEEEEEEecCCC-----------C---------hHHHHHH----HHHHHHHHh
Q psy18060        125 CLIGEGSFGKVFKAIHLD------LKKTVALKIISKSGR-----------S---------GKELSSL----KQECEIQKH  174 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~------~~~~vAvK~i~~~~~-----------~---------~~~~~~~----~~Ei~il~~  174 (549)
                      ..||.|-=+.||.|....      .+..+|+|+......           .         ......+    ++|.+.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997653      357899998753210           0         1112233    389999998


Q ss_pred             cCC--CCeeEEEEEEeeCCEEEEEEecCCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCCccccccCCcEEE
Q psy18060        175 LAH--PNIIKFIASHETLNEFVLITEFAHMS-LSNLLEQRKKLSETICVQILSNLISALYYL-HSNRVLHRDLKPQNVLL  250 (549)
Q Consensus       175 l~h--pnIv~l~~~~~~~~~~~iV~E~~~gs-L~~~l~~~~~l~e~~~~~i~~qIl~aL~yL-H~~gIiHrDIKP~NILl  250 (549)
                      +..  -+++..+++    ..-+|||||++++ +....-+...+++.++..+..|++.+|..| |+.||||+||+|.|||+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~  158 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW  158 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            843  456667764    3457999999863 322222233566667788899999999999 89999999999999999


Q ss_pred             ecCCcEEEeecccceecc
Q psy18060        251 NKDGVAMLCDFGFARSMA  268 (549)
Q Consensus       251 ~~~g~vKL~DFGla~~~~  268 (549)
                      + +|.+.|+|||.|-...
T Consensus       159 ~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         159 H-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             E-CCcEEEEECCCceeCC
Confidence            6 5789999999886554


No 458
>KOG0580|consensus
Probab=99.31  E-value=3.5e-13  Score=128.88  Aligned_cols=87  Identities=32%  Similarity=0.432  Sum_probs=78.6

Q ss_pred             cccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChh-hhhhHHHHHHHHHhcCCCCccccccccccccce
Q psy18060          5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGK-ELSSLKQECEIQKHLAHPNIIKFIASHETLNEF   83 (549)
Q Consensus         5 ~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~   83 (549)
                      ..++++|++.+.||+|.||.||+|+.+.++-.||+|++.|++.... ..+++.|||+|.+.|+||||+++|+.|.+...+
T Consensus        18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI   97 (281)
T ss_pred             ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence            4578899999999999999999999999999999999988774333 346799999999999999999999999999999


Q ss_pred             ehhhhhhh
Q psy18060         84 VLITEFAH   91 (549)
Q Consensus        84 ~lv~ey~~   91 (549)
                      |+++||..
T Consensus        98 yLilEya~  105 (281)
T KOG0580|consen   98 YLILEYAP  105 (281)
T ss_pred             EEEEEecC
Confidence            99999974


No 459
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.31  E-value=8.5e-12  Score=116.08  Aligned_cols=126  Identities=29%  Similarity=0.300  Sum_probs=93.4

Q ss_pred             EEEEecCCcEEEEEEEEcCCCceEEEEEEecCCCChHHHHHHHHHHHHHHhcCCCCe-eEEEEEEeeCCEEEEEEecCCC
Q psy18060        124 ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNI-IKFIASHETLNEFVLITEFAHM  202 (549)
Q Consensus       124 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnI-v~l~~~~~~~~~~~iV~E~~~g  202 (549)
                      ++.++.|.++.||++...  +..|++|.......   ....+.+|+.+++.+.+.++ ++++....  ...++|||+++|
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G   75 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG   75 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence            467899999999999865  78899998754321   12245788888888865444 45555543  234799999987


Q ss_pred             -CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCC-----ccccccCCcEEEecCCcEEEeecccce
Q psy18060        203 -SLSNLLEQRKKLSETICVQILSNLISALYYLHSNRV-----LHRDLKPQNVLLNKDGVAMLCDFGFAR  265 (549)
Q Consensus       203 -sL~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI-----iHrDIKP~NILl~~~g~vKL~DFGla~  265 (549)
                       ++...        ......++.+++.+|..||+.++     +|+|++|.||+++ ++.++++|||.+.
T Consensus        76 ~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          76 SELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             Cccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence             44432        11123467799999999999985     9999999999998 6789999999875


No 460
>KOG0616|consensus
Probab=99.28  E-value=2e-12  Score=127.12  Aligned_cols=87  Identities=20%  Similarity=0.372  Sum_probs=80.4

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      ..+++|+.+++||.|+||+|.+++++.+|..||+|++++... ..++.+...+|..+|+.+.||++|+++++|.+...+|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            567899999999999999999999999999999999988763 4567788999999999999999999999999999999


Q ss_pred             hhhhhhhc
Q psy18060         85 LITEFAHM   92 (549)
Q Consensus        85 lv~ey~~~   92 (549)
                      +||+|..+
T Consensus       121 mvmeyv~G  128 (355)
T KOG0616|consen  121 MVMEYVPG  128 (355)
T ss_pred             EEEeccCC
Confidence            99999854


No 461
>KOG0581|consensus
Probab=99.26  E-value=4.8e-12  Score=128.11  Aligned_cols=90  Identities=24%  Similarity=0.354  Sum_probs=77.6

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccc-ceeh
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-EFVL   85 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-~~~l   85 (549)
                      .+++.+.+..||+|+.|+||||+|+.|++.||+|.|... .+....+++.||++++++.+||+||.+|++|.... .+++
T Consensus        77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI  155 (364)
T KOG0581|consen   77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI  155 (364)
T ss_pred             CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence            345788899999999999999999999999999999433 34455678999999999999999999999999988 4999


Q ss_pred             hhhhhh-cccccC
Q psy18060         86 ITEFAH-MSLSKL   97 (549)
Q Consensus        86 v~ey~~-~sLskl   97 (549)
                      +|||+. +||.++
T Consensus       156 ~mEYMDgGSLd~~  168 (364)
T KOG0581|consen  156 CMEYMDGGSLDDI  168 (364)
T ss_pred             ehhhcCCCCHHHH
Confidence            999984 566544


No 462
>KOG0594|consensus
Probab=99.25  E-value=2.3e-12  Score=129.91  Aligned_cols=90  Identities=32%  Similarity=0.406  Sum_probs=80.9

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCC-cccccccccccc-----
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPN-IIKFIASHETLN-----   81 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn-IV~l~~~~~~~~-----   81 (549)
                      ++.|+.++.||+|+||+||+|+.+.+|+.||+|+|......+.......|||.+|+.|+|+| ||.+++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            66799999999999999999999999999999999877654455677899999999999999 999999998777     


Q ss_pred             -ceehhhhhhhcccccC
Q psy18060         82 -EFVLITEFAHMSLSKL   97 (549)
Q Consensus        82 -~~~lv~ey~~~sLskl   97 (549)
                       .+++|++|..++|.++
T Consensus        90 ~~l~lvfe~~d~DL~~y  106 (323)
T KOG0594|consen   90 GKLYLVFEFLDRDLKKY  106 (323)
T ss_pred             ceEEEEEEeecccHHHH
Confidence             8999999999888765


No 463
>KOG0694|consensus
Probab=99.24  E-value=1e-11  Score=134.05  Aligned_cols=88  Identities=24%  Similarity=0.395  Sum_probs=79.8

Q ss_pred             cccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcC-CCCccccccccccccc
Q psy18060          5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLA-HPNIIKFIASHETLNE   82 (549)
Q Consensus         5 ~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~   82 (549)
                      ...+++|.++++||+|+||+|++|..+.+++.||||.++|... ...+++....|.+|+...+ ||++++++.+|++.+.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            3467899999999999999999999999999999999998774 5567888999999998776 9999999999999999


Q ss_pred             eehhhhhhhc
Q psy18060         83 FVLITEFAHM   92 (549)
Q Consensus        83 ~~lv~ey~~~   92 (549)
                      +++||||..+
T Consensus       444 l~fvmey~~G  453 (694)
T KOG0694|consen  444 LFFVMEYVAG  453 (694)
T ss_pred             EEEEEEecCC
Confidence            9999999854


No 464
>KOG0660|consensus
Probab=99.24  E-value=5.3e-12  Score=127.32  Aligned_cols=91  Identities=25%  Similarity=0.344  Sum_probs=80.1

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccc-----cc
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHET-----LN   81 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~   81 (549)
                      ....|..++.||+|+||.|++|.++.||+.||||+|.....+....++..||+++|+.++|+|||.+++.+..     .+
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            3456777899999999999999999999999999998777667777899999999999999999999998854     56


Q ss_pred             ceehhhhhhhcccccC
Q psy18060         82 EFVLITEFAHMSLSKL   97 (549)
Q Consensus        82 ~~~lv~ey~~~sLskl   97 (549)
                      .+|+|++++..+|.++
T Consensus       100 DvYiV~elMetDL~~i  115 (359)
T KOG0660|consen  100 DVYLVFELMETDLHQI  115 (359)
T ss_pred             eeEEehhHHhhHHHHH
Confidence            7999999998887765


No 465
>KOG0585|consensus
Probab=99.22  E-value=8.6e-12  Score=129.39  Aligned_cols=86  Identities=30%  Similarity=0.447  Sum_probs=74.5

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCCh------------hhhhhHHHHHHHHHhcCCCCcccc
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSG------------KELSSLKQECEIQKHLAHPNIIKF   73 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~------------~~~~~~~~Ei~il~~l~HpnIV~l   73 (549)
                      ..+++|++++.||+|.||+|.+|++..+++.||||+++|.....            ...+++.+||.||++|+|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            45789999999999999999999999999999999998764211            134689999999999999999999


Q ss_pred             ccccccc--cceehhhhhhh
Q psy18060         74 IASHETL--NEFVLITEFAH   91 (549)
Q Consensus        74 ~~~~~~~--~~~~lv~ey~~   91 (549)
                      +++..+.  +.+|+|+|||.
T Consensus       174 iEvLDDP~s~~~YlVley~s  193 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCS  193 (576)
T ss_pred             EEeecCcccCceEEEEEecc
Confidence            9998654  57999999985


No 466
>KOG0032|consensus
Probab=99.20  E-value=1.6e-11  Score=129.40  Aligned_cols=84  Identities=29%  Similarity=0.449  Sum_probs=76.2

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCC-hhhhhhHHHHHHHHHhcC-CCCccccccccccccceeh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS-GKELSSLKQECEIQKHLA-HPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~l   85 (549)
                      .+.|++.+.||+|+||.||+|+++.||+.||+|.|++.... ....+.+.+|+.||++|. |||||.++++|++...+++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            45799999999999999999999999999999999887643 234568999999999999 9999999999999999999


Q ss_pred             hhhhhh
Q psy18060         86 ITEFAH   91 (549)
Q Consensus        86 v~ey~~   91 (549)
                      |||++.
T Consensus       114 vmEL~~  119 (382)
T KOG0032|consen  114 VMELCE  119 (382)
T ss_pred             EEEecC
Confidence            999986


No 467
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.20  E-value=2.9e-11  Score=122.61  Aligned_cols=90  Identities=29%  Similarity=0.383  Sum_probs=77.3

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceeh
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~l   85 (549)
                      +.+++|++++.||+|+||.||+|.++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++.+....++
T Consensus         2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            3578899999999999999999999999999999999754322 223467789999999999999999999999999999


Q ss_pred             hhhhhhccccc
Q psy18060         86 ITEFAHMSLSK   96 (549)
Q Consensus        86 v~ey~~~sLsk   96 (549)
                      +|||+.++|..
T Consensus        81 v~e~~~~~l~~   91 (288)
T cd07871          81 VFEYLDSDLKQ   91 (288)
T ss_pred             EEeCCCcCHHH
Confidence            99998776543


No 468
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.19  E-value=2.7e-11  Score=128.25  Aligned_cols=87  Identities=20%  Similarity=0.334  Sum_probs=76.0

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      +.|++++.||+|+||+||+|+++.+++.||||++.+... .......+.+|+++++.++|||||++++++.+...++++|
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            368999999999999999999999999999999976543 3344567899999999999999999999999999999999


Q ss_pred             hhhhc-ccc
Q psy18060         88 EFAHM-SLS   95 (549)
Q Consensus        88 ey~~~-sLs   95 (549)
                      ||+.+ +|.
T Consensus        81 E~~~gg~L~   89 (381)
T cd05626          81 DYIPGGDMM   89 (381)
T ss_pred             ecCCCCcHH
Confidence            99853 443


No 469
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.18  E-value=3.4e-11  Score=121.55  Aligned_cols=85  Identities=22%  Similarity=0.420  Sum_probs=75.2

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE   88 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~e   88 (549)
                      ++|++.+.||+|+||.||+|+++.+++.||||++..........+.+.+|+++++.++||||+++++++.....+++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            47999999999999999999999999999999997654433345678899999999999999999999999999999999


Q ss_pred             hhhcc
Q psy18060         89 FAHMS   93 (549)
Q Consensus        89 y~~~s   93 (549)
                      |+..+
T Consensus        81 ~~~~~   85 (287)
T cd07848          81 YVEKN   85 (287)
T ss_pred             cCCCC
Confidence            98654


No 470
>KOG0586|consensus
Probab=99.18  E-value=2.7e-11  Score=129.45  Aligned_cols=312  Identities=23%  Similarity=0.289  Sum_probs=184.7

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceeh
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~l   85 (549)
                      .....|.+.+.||+|.||+|.+|++..||..||||.|++...+..-++.+.||+++|..|+|||||+++.+.++...+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            44567999999999999999999999999999999999988776666779999999999999999999999999999999


Q ss_pred             hhhhhhc-cccc-----------CCCCccc----------cCC-CccccccccccccceeEEEEEecCCcEEEEEEEEc-
Q psy18060         86 ITEFAHM-SLSK-----------LGEPWFH----------NHC-QPVKMEKSNGALEKYQKICLIGEGSFGKVFKAIHL-  141 (549)
Q Consensus        86 v~ey~~~-sLsk-----------lg~p~~~----------~~~-~~~~~~~~~~~~~~y~~~~~iG~G~fg~Vy~~~~~-  141 (549)
                      ||||+.+ .+..           .....+.          ..+ ....+.. .+.+=.....-.|+.++|++++.--.. 
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~-eNilL~~~mnikIaDfgfS~~~~~~~~l  211 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKA-ENILLDENMNIKIADFGFSTFFDYGLML  211 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccch-hhcccccccceeeeccccceeecccccc
Confidence            9999732 1111           1111111          000 0001111 111122233367999999999863211 


Q ss_pred             ---CCCceEEEEEEecCCC-ChHHHH--------------HHHHHHHHHHhcCCCCeeEEEEEE----eeCCE---EEEE
Q psy18060        142 ---DLKKTVALKIISKSGR-SGKELS--------------SLKQECEIQKHLAHPNIIKFIASH----ETLNE---FVLI  196 (549)
Q Consensus       142 ---~~~~~vAvK~i~~~~~-~~~~~~--------------~~~~Ei~il~~l~hpnIv~l~~~~----~~~~~---~~iV  196 (549)
                         ..-.+||.+.+..... ...+.+              .+..+-+.++.++++.++.-+...    .+.+.   -+||
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lv  291 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLV  291 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhc
Confidence               1134677776643321 111111              112233344555566555444321    00000   0112


Q ss_pred             EecCC-CCHHHHHHhcC---CCCHHHHHHHHHH---HHHHHHHHHhCCCccccccCCcEEEecCC---------------
Q psy18060        197 TEFAH-MSLSNLLEQRK---KLSETICVQILSN---LISALYYLHSNRVLHRDLKPQNVLLNKDG---------------  254 (549)
Q Consensus       197 ~E~~~-gsL~~~l~~~~---~l~e~~~~~i~~q---Il~aL~yLH~~gIiHrDIKP~NILl~~~g---------------  254 (549)
                      .+-.. +++.+..+.+-   .+.+.........   +...-.+.|-..+.|++++-+++|..+..               
T Consensus       292 l~Pskr~~~dqim~~~W~n~~~~~~~l~p~~e~~~~~~~~~r~~~m~~~G~~~~~i~~sL~~~k~d~i~a~y~ll~~~~~  371 (596)
T KOG0586|consen  292 LNPSKRGPCDQIMKDRWRNDLLEARLLAPLIERSTPFILAKRILHMNSIGHRRLKIEESLAKQKFDDINATYLLLGYRKQ  371 (596)
T ss_pred             cCccccCCHHHhhhhcccchhhhhhhhhcccccCccchhhHHHHHHHhhccchhhHHHHHhhhhHHHHHHHHhhcchhhh
Confidence            11111 23333332211   1111111222222   45556667778889999999988876431               


Q ss_pred             -cEEEeecccceecccCcccccccCCCCcccccccccCCCCC-cchhhHHHHHHHHHHHhC-CCCCCCC
Q psy18060        255 -VAMLCDFGFARSMAVGTHMLTSIKGTPLYMAPELIAERPYD-HTADLWSLGCIAYEIHMG-HPPFKTV  320 (549)
Q Consensus       255 -~vKL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~y~-~ksDIwSlGvil~eLltG-~~Pf~~~  320 (549)
                       ...++|++.. ..... ......++++.+..++.+....+. .-.+-|+.|.+.+..+.. +.|+...
T Consensus       372 ~s~~~~~~~~~-~~~~~-~~~~~~~~s~~~~~~d~~~p~~~~~~~~~~~~~~~~~~s~~~e~~~~a~~~  438 (596)
T KOG0586|consen  372 RSIESADFGLK-TIELN-YMCSARCGSPDYVSVDRLMPVPYDGHLTDTWDGSVILYSLLDEDRLPARDL  438 (596)
T ss_pred             ccchhhhcCCC-ccccc-cccccccCCCCcccccccCCCCcccccccccccCccchhhhhcccCCCCCc
Confidence             3456677652 22211 333444677777788877766554 447899999999998876 6666543


No 471
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.18  E-value=2.9e-11  Score=126.88  Aligned_cols=87  Identities=24%  Similarity=0.374  Sum_probs=75.3

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+|..++||||+++++.+.+...++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            479999999999999999999999999999999976432 2234456889999999999999999999999999999999


Q ss_pred             hhhh-cccc
Q psy18060         88 EFAH-MSLS   95 (549)
Q Consensus        88 ey~~-~sLs   95 (549)
                      ||+. ++|.
T Consensus        81 E~~~~g~L~   89 (364)
T cd05599          81 EYLPGGDMM   89 (364)
T ss_pred             CCCCCcHHH
Confidence            9984 3443


No 472
>KOG0589|consensus
Probab=99.18  E-value=1.2e-11  Score=129.78  Aligned_cols=89  Identities=26%  Similarity=0.424  Sum_probs=81.4

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccc-eeh
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE-FVL   85 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~-~~l   85 (549)
                      .+++|..++.||+|+||.+++++++..++.||+|+|.....+..+++...+|+.+++++.|||||.+.++|+..+. +++
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            4789999999999999999999999999999999999888777777788999999999999999999999998888 999


Q ss_pred             hhhhhhc-ccc
Q psy18060         86 ITEFAHM-SLS   95 (549)
Q Consensus        86 v~ey~~~-sLs   95 (549)
                      +|+|+.| ++.
T Consensus        82 vm~Y~eGg~l~   92 (426)
T KOG0589|consen   82 VMEYCEGGDLA   92 (426)
T ss_pred             EEeecCCCCHH
Confidence            9999964 443


No 473
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.18  E-value=3.9e-11  Score=122.51  Aligned_cols=88  Identities=28%  Similarity=0.387  Sum_probs=76.3

Q ss_pred             cccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehh
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLI   86 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv   86 (549)
                      ..++|++++.||+|+||.||+|+++.+|+.||||++...... .....+.+|+.+++.++||||+++++++.+....++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            467899999999999999999999999999999999754322 2234567899999999999999999999999999999


Q ss_pred             hhhhhcccc
Q psy18060         87 TEFAHMSLS   95 (549)
Q Consensus        87 ~ey~~~sLs   95 (549)
                      |||++++|.
T Consensus        82 ~e~~~~~l~   90 (303)
T cd07869          82 FEYVHTDLC   90 (303)
T ss_pred             EECCCcCHH
Confidence            999987654


No 474
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.17  E-value=3.5e-11  Score=124.73  Aligned_cols=88  Identities=27%  Similarity=0.347  Sum_probs=76.6

Q ss_pred             cccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccce
Q psy18060          5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEF   83 (549)
Q Consensus         5 ~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~   83 (549)
                      .-.+++|++.+.||+|+||.||+|+++.+|+.||||++.+... .....+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   93 (329)
T PTZ00263         14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV   93 (329)
T ss_pred             CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence            3457889999999999999999999999999999999976432 223446788999999999999999999999999999


Q ss_pred             ehhhhhhhc
Q psy18060         84 VLITEFAHM   92 (549)
Q Consensus        84 ~lv~ey~~~   92 (549)
                      +++|||+.+
T Consensus        94 ~lv~e~~~~  102 (329)
T PTZ00263         94 YFLLEFVVG  102 (329)
T ss_pred             EEEEcCCCC
Confidence            999999753


No 475
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.16  E-value=3.7e-11  Score=126.85  Aligned_cols=87  Identities=26%  Similarity=0.373  Sum_probs=75.6

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|.++.+|+.||||++.+... .......+.+|+++++.++|||||++++++.+...+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            479999999999999999999999999999999976432 2334567889999999999999999999999999999999


Q ss_pred             hhhh-cccc
Q psy18060         88 EFAH-MSLS   95 (549)
Q Consensus        88 ey~~-~sLs   95 (549)
                      ||+. ++|.
T Consensus        81 E~~~gg~L~   89 (377)
T cd05629          81 EFLPGGDLM   89 (377)
T ss_pred             eCCCCCcHH
Confidence            9984 4553


No 476
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.15  E-value=4.3e-11  Score=121.69  Aligned_cols=83  Identities=20%  Similarity=0.340  Sum_probs=73.0

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|.++.+|+.||||++.+... .....+.+.+|+++++.++||||+++++.+.+...++++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            479999999999999999999999999999999976432 2234466889999999999999999999999999999999


Q ss_pred             hhhh
Q psy18060         88 EFAH   91 (549)
Q Consensus        88 ey~~   91 (549)
                      ||+.
T Consensus        81 e~~~   84 (291)
T cd05612          81 EYVP   84 (291)
T ss_pred             eCCC
Confidence            9874


No 477
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.14  E-value=4.7e-11  Score=126.32  Aligned_cols=84  Identities=20%  Similarity=0.330  Sum_probs=74.2

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      +.|++++.||+|+||.||+|+++.+++.||||++.+... .......+.+|+.+++.++|||||++++.+.+...+++||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            369999999999999999999999999999999976532 2334567889999999999999999999999999999999


Q ss_pred             hhhhc
Q psy18060         88 EFAHM   92 (549)
Q Consensus        88 ey~~~   92 (549)
                      ||+.+
T Consensus        81 E~~~g   85 (382)
T cd05625          81 DYIPG   85 (382)
T ss_pred             eCCCC
Confidence            99853


No 478
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.14  E-value=4.8e-11  Score=125.88  Aligned_cols=87  Identities=20%  Similarity=0.310  Sum_probs=75.0

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|+++.+|+.||||++.+... .......+.+|+.+|+.++||||+++++.+.+.+.++++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999975432 2223456889999999999999999999999999999999


Q ss_pred             hhhh-cccc
Q psy18060         88 EFAH-MSLS   95 (549)
Q Consensus        88 ey~~-~sLs   95 (549)
                      ||+. ++|.
T Consensus        81 E~~~~g~L~   89 (376)
T cd05598          81 DYIPGGDMM   89 (376)
T ss_pred             eCCCCCcHH
Confidence            9984 4453


No 479
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.13  E-value=6.6e-11  Score=124.36  Aligned_cols=84  Identities=24%  Similarity=0.358  Sum_probs=74.0

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+... .......+.+|+.++..++||||+++++.+.+...+++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            579999999999999999999999999999999976532 2233457889999999999999999999999999999999


Q ss_pred             hhhhc
Q psy18060         88 EFAHM   92 (549)
Q Consensus        88 ey~~~   92 (549)
                      ||+.+
T Consensus        81 E~~~g   85 (363)
T cd05628          81 EFLPG   85 (363)
T ss_pred             cCCCC
Confidence            99853


No 480
>KOG0583|consensus
Probab=99.12  E-value=7.6e-11  Score=124.15  Aligned_cols=87  Identities=33%  Similarity=0.434  Sum_probs=75.6

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCC---hhhhhhHHHHHHHHHhcC-CCCcccccccccccc
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRS---GKELSSLKQECEIQKHLA-HPNIIKFIASHETLN   81 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~---~~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~   81 (549)
                      ....+|.+.+.||+|+||+|++|.+..+|..||||+++++...   ....+.+.||+.+++.++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3456899999999999999999999999999999988775321   123456779999999999 999999999999999


Q ss_pred             ceehhhhhhhc
Q psy18060         82 EFVLITEFAHM   92 (549)
Q Consensus        82 ~~~lv~ey~~~   92 (549)
                      .+|+||||+.+
T Consensus        94 ~~~ivmEy~~g  104 (370)
T KOG0583|consen   94 KIYIVMEYCSG  104 (370)
T ss_pred             eEEEEEEecCC
Confidence            99999999865


No 481
>KOG0201|consensus
Probab=99.12  E-value=5.3e-11  Score=122.69  Aligned_cols=86  Identities=34%  Similarity=0.477  Sum_probs=77.2

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceeh
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~l   85 (549)
                      ..-..|+.++.||+|+||.||+|.+..|++.||||+|+.... ..+++.+.+|+.+|+++++|||.++|+++..+..+++
T Consensus        10 ~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwi   88 (467)
T KOG0201|consen   10 DPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWI   88 (467)
T ss_pred             CcccccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHH
Confidence            344578999999999999999999999999999999987643 3456788999999999999999999999999999999


Q ss_pred             hhhhhhc
Q psy18060         86 ITEFAHM   92 (549)
Q Consensus        86 v~ey~~~   92 (549)
                      +|||+.|
T Consensus        89 iMey~~g   95 (467)
T KOG0201|consen   89 IMEYCGG   95 (467)
T ss_pred             HHHHhcC
Confidence            9999965


No 482
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.12  E-value=8.8e-11  Score=121.44  Aligned_cols=87  Identities=23%  Similarity=0.364  Sum_probs=72.1

Q ss_pred             CeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccc-----ccee
Q psy18060         10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL-----NEFV   84 (549)
Q Consensus        10 ~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~   84 (549)
                      +|++.+.||+|+||.||+|+++.+|+.||||++............+.+|+++++.++||||+++++++...     ..++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            58999999999999999999999999999999975433333445688999999999999999999887432     3479


Q ss_pred             hhhhhhhccccc
Q psy18060         85 LITEFAHMSLSK   96 (549)
Q Consensus        85 lv~ey~~~sLsk   96 (549)
                      ++|||+.++|..
T Consensus        81 lv~e~~~~~L~~   92 (338)
T cd07859          81 VVFELMESDLHQ   92 (338)
T ss_pred             EEEecCCCCHHH
Confidence            999998766543


No 483
>KOG1026|consensus
Probab=99.11  E-value=1.4e-11  Score=136.06  Aligned_cols=90  Identities=24%  Similarity=0.414  Sum_probs=75.8

Q ss_pred             cccCeeeeeeecccCceEEEEEEECC-----CCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccc
Q psy18060          7 ALEKYQKICLIGEGSFGKVFKAIHLD-----LKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN   81 (549)
Q Consensus         7 ~~~~y~~~~~IG~G~fG~V~~~~~~~-----~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~   81 (549)
                      ...+-+..+.||+|+||+||+|+...     +.+.||||.++.. .+....+.|.||+++|+.++|||||+|+|++..++
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~  562 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREGD  562 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence            34567788999999999999998642     3468999999654 34445678999999999999999999999999999


Q ss_pred             ceehhhhhh-hcccccC
Q psy18060         82 EFVLITEFA-HMSLSKL   97 (549)
Q Consensus        82 ~~~lv~ey~-~~sLskl   97 (549)
                      .+++|+||+ |++|.++
T Consensus       563 P~~MvFEYm~~GDL~eF  579 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEF  579 (774)
T ss_pred             eeEEEEEecccccHHHH
Confidence            999999998 7777654


No 484
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.11  E-value=1.3e-10  Score=119.04  Aligned_cols=89  Identities=28%  Similarity=0.383  Sum_probs=76.7

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceeh
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~l   85 (549)
                      ..+++|++++.||+|+||.||+|+++.+++.||||+++..... .....+.+|+++++.++||||+++++++......++
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence            4578999999999999999999999999999999999755432 223457789999999999999999999999999999


Q ss_pred             hhhhhhcccc
Q psy18060         86 ITEFAHMSLS   95 (549)
Q Consensus        86 v~ey~~~sLs   95 (549)
                      +|||+.++|.
T Consensus        82 v~e~~~~~l~   91 (309)
T cd07872          82 VFEYLDKDLK   91 (309)
T ss_pred             EEeCCCCCHH
Confidence            9999876553


No 485
>KOG0582|consensus
Probab=99.10  E-value=1.1e-10  Score=120.53  Aligned_cols=91  Identities=25%  Similarity=0.353  Sum_probs=80.0

Q ss_pred             cccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          5 NGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         5 ~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      ....+.|++.++||.|+-+.||+|+++.+++.||||+|+...-+ .++..+++|+..|+.++|||||+++.+|...+.+|
T Consensus        22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~-~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN-NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh-hhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence            35677899999999999999999999999999999999876533 34778999999999999999999999999999999


Q ss_pred             hhhhhhh-ccccc
Q psy18060         85 LITEFAH-MSLSK   96 (549)
Q Consensus        85 lv~ey~~-~sLsk   96 (549)
                      +||-|+. +|+..
T Consensus       101 vVmpfMa~GS~ld  113 (516)
T KOG0582|consen  101 VVMPFMAGGSLLD  113 (516)
T ss_pred             EeehhhcCCcHHH
Confidence            9999874 45443


No 486
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.10  E-value=1.3e-10  Score=122.43  Aligned_cols=87  Identities=22%  Similarity=0.245  Sum_probs=74.0

Q ss_pred             CeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccc-----cee
Q psy18060         10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-----EFV   84 (549)
Q Consensus        10 ~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~   84 (549)
                      +|++++.||+|+||.||+|.+..+|+.||||++............+.+|+++++.++||||+++++++....     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478999999999999999999999999999999765433334567889999999999999999999987766     789


Q ss_pred             hhhhhhhccccc
Q psy18060         85 LITEFAHMSLSK   96 (549)
Q Consensus        85 lv~ey~~~sLsk   96 (549)
                      ++++|+.++|..
T Consensus        81 lv~e~~~~~l~~   92 (372)
T cd07853          81 VVTELMQSDLHK   92 (372)
T ss_pred             EEeeccccCHHH
Confidence            999998766543


No 487
>KOG4236|consensus
Probab=99.10  E-value=7.9e-11  Score=123.28  Aligned_cols=84  Identities=31%  Similarity=0.465  Sum_probs=74.8

Q ss_pred             eee--eeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhhh
Q psy18060         11 YQK--ICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE   88 (549)
Q Consensus        11 y~~--~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~e   88 (549)
                      |++  -++||+|.||+||-|.++.||+.||||+|+|-....+...+++.|+.||.+++||-||.+-..|++.+.+++|||
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVME  643 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVME  643 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEeh
Confidence            444  468999999999999999999999999999876544444789999999999999999999999999999999999


Q ss_pred             hhhccc
Q psy18060         89 FAHMSL   94 (549)
Q Consensus        89 y~~~sL   94 (549)
                      -.|+++
T Consensus       644 Kl~GDM  649 (888)
T KOG4236|consen  644 KLHGDM  649 (888)
T ss_pred             hhcchH
Confidence            888764


No 488
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.10  E-value=1.1e-10  Score=120.94  Aligned_cols=88  Identities=23%  Similarity=0.312  Sum_probs=75.5

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|++..+|+.||||++++... .......+.+|+.++..++||||+++++.+.+...++++|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999976532 2234467889999999999999999999999999999999


Q ss_pred             hhhh-ccccc
Q psy18060         88 EFAH-MSLSK   96 (549)
Q Consensus        88 ey~~-~sLsk   96 (549)
                      ||+. ++|..
T Consensus        81 e~~~g~~L~~   90 (333)
T cd05600          81 EYVPGGDFRT   90 (333)
T ss_pred             eCCCCCCHHH
Confidence            9984 45543


No 489
>KOG0577|consensus
Probab=99.09  E-value=4.9e-11  Score=126.30  Aligned_cols=90  Identities=30%  Similarity=0.418  Sum_probs=79.1

Q ss_pred             CeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhhh
Q psy18060         10 KYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE   88 (549)
Q Consensus        10 ~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~e   88 (549)
                      .|.=++.||.|+||-||-|++..|.+.||||+++.+.. +.+--+.++.|++.|.+|+|||+|.+.++|-.....|+|||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46778899999999999999999999999999987764 33334678999999999999999999999999999999999


Q ss_pred             hhhcccccCCC
Q psy18060         89 FAHMSLSKLGE   99 (549)
Q Consensus        89 y~~~sLsklg~   99 (549)
                      ||-+|-+++-+
T Consensus       107 YClGSAsDlle  117 (948)
T KOG0577|consen  107 YCLGSASDLLE  117 (948)
T ss_pred             HHhccHHHHHH
Confidence            99988777643


No 490
>KOG0192|consensus
Probab=99.09  E-value=6.8e-11  Score=123.76  Aligned_cols=88  Identities=30%  Similarity=0.478  Sum_probs=73.4

Q ss_pred             ccCeeeeeeecccCceEEEEEEECCCCce-EEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccc-ceeh
Q psy18060          8 LEKYQKICLIGEGSFGKVFKAIHLDLKKT-VALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-EFVL   85 (549)
Q Consensus         8 ~~~y~~~~~IG~G~fG~V~~~~~~~~~~~-vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-~~~l   85 (549)
                      .++....+.||+|+||+||+|.++.  +. ||||++.....+....+.|.+|+.+|++|+|||||.++|++.+.. .+.+
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            4456667779999999999999984  55 999999876554444678999999999999999999999998887 7999


Q ss_pred             hhhhhh-cccccC
Q psy18060         86 ITEFAH-MSLSKL   97 (549)
Q Consensus        86 v~ey~~-~sLskl   97 (549)
                      ||||+. ++|..+
T Consensus       118 VtEy~~~GsL~~~  130 (362)
T KOG0192|consen  118 VTEYMPGGSLSVL  130 (362)
T ss_pred             EEEeCCCCcHHHH
Confidence            999984 566554


No 491
>KOG0690|consensus
Probab=99.09  E-value=3e-11  Score=120.05  Aligned_cols=87  Identities=23%  Similarity=0.364  Sum_probs=79.1

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCC-CChhhhhhHHHHHHHHHhcCCCCcccccccccccccee
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSG-RSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFV   84 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~   84 (549)
                      ..|++|+.+++||+|+||+|-+|+.+.+|+.||||+++|.- ....++...+.|-++|...+||++..+..+|++...++
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence            36889999999999999999999999999999999998765 35566777888999999999999999999999999999


Q ss_pred             hhhhhhhc
Q psy18060         85 LITEFAHM   92 (549)
Q Consensus        85 lv~ey~~~   92 (549)
                      +||||..+
T Consensus       245 FVMeyanG  252 (516)
T KOG0690|consen  245 FVMEYANG  252 (516)
T ss_pred             EEEEEccC
Confidence            99999854


No 492
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.09  E-value=1.7e-10  Score=117.52  Aligned_cols=89  Identities=28%  Similarity=0.381  Sum_probs=77.0

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceeh
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVL   85 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~l   85 (549)
                      ..+++|++++.||+|+||.||+|+++.+++.||+|.+...... .....+.+|+.+++.++||||+++++++......++
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence            4578999999999999999999999999999999999754422 223457789999999999999999999999999999


Q ss_pred             hhhhhhcccc
Q psy18060         86 ITEFAHMSLS   95 (549)
Q Consensus        86 v~ey~~~sLs   95 (549)
                      ++||+.++|.
T Consensus        82 v~e~~~~~l~   91 (301)
T cd07873          82 VFEYLDKDLK   91 (301)
T ss_pred             EEeccccCHH
Confidence            9999876653


No 493
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.09  E-value=1.9e-10  Score=120.60  Aligned_cols=90  Identities=26%  Similarity=0.345  Sum_probs=75.6

Q ss_pred             ccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccc-----
Q psy18060          6 GALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETL-----   80 (549)
Q Consensus         6 ~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----   80 (549)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++.+..........+.+|+.+++.++||||+++++++...     
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            346899999999999999999999999999999999976544444456788999999999999999999987543     


Q ss_pred             -cceehhhhhhhcccc
Q psy18060         81 -NEFVLITEFAHMSLS   95 (549)
Q Consensus        81 -~~~~lv~ey~~~sLs   95 (549)
                       ..++++|||+.+++.
T Consensus        98 ~~~~~lv~e~~~~~l~  113 (359)
T cd07876          98 FQDVYLVMELMDANLC  113 (359)
T ss_pred             cceeEEEEeCCCcCHH
Confidence             347899999876653


No 494
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.08  E-value=9.3e-11  Score=115.98  Aligned_cols=85  Identities=32%  Similarity=0.480  Sum_probs=74.3

Q ss_pred             eeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhhhhh
Q psy18060         11 YQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITEFA   90 (549)
Q Consensus        11 y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~ey~   90 (549)
                      |++++.||+|+||+||+|++..+++.||+|++..............+|+.++++++||||+++++.+.+....+++|+++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            78999999999999999999999999999999876544444444567999999999999999999999999999999998


Q ss_pred             hc-ccc
Q psy18060         91 HM-SLS   95 (549)
Q Consensus        91 ~~-sLs   95 (549)
                      .+ +|.
T Consensus        81 ~~~~L~   86 (260)
T PF00069_consen   81 PGGSLQ   86 (260)
T ss_dssp             TTEBHH
T ss_pred             cccccc
Confidence            76 554


No 495
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.08  E-value=1.4e-10  Score=120.82  Aligned_cols=83  Identities=24%  Similarity=0.446  Sum_probs=73.7

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|++..+|+.||||++.+... .......+.+|++++..++||||+++++.+.+.+.+++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            479999999999999999999999999999999976542 2234567889999999999999999999999999999999


Q ss_pred             hhhh
Q psy18060         88 EFAH   91 (549)
Q Consensus        88 ey~~   91 (549)
                      ||+.
T Consensus        81 e~~~   84 (350)
T cd05573          81 EYMP   84 (350)
T ss_pred             cCCC
Confidence            9984


No 496
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.08  E-value=1.3e-10  Score=122.64  Aligned_cols=92  Identities=22%  Similarity=0.276  Sum_probs=77.4

Q ss_pred             ccccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccc
Q psy18060          4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE   82 (549)
Q Consensus         4 ~~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~   82 (549)
                      ..-..++|++.+.||+|+||.||+|+++.+|+.||||++++... .......+.+|+.+++.++||||+++++++.+...
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            34456789999999999999999999999999999999976432 22233557789999999999999999999999999


Q ss_pred             eehhhhhhh-cccc
Q psy18060         83 FVLITEFAH-MSLS   95 (549)
Q Consensus        83 ~~lv~ey~~-~sLs   95 (549)
                      +++||||+. ++|.
T Consensus       118 ~~lv~Ey~~gg~L~  131 (370)
T cd05596         118 LYMVMEYMPGGDLV  131 (370)
T ss_pred             EEEEEcCCCCCcHH
Confidence            999999984 4443


No 497
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.07  E-value=1.5e-10  Score=120.00  Aligned_cols=87  Identities=18%  Similarity=0.279  Sum_probs=74.8

Q ss_pred             cCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccceehhh
Q psy18060          9 EKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLIT   87 (549)
Q Consensus         9 ~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~lv~   87 (549)
                      ++|++++.||+|+||.||+|+++.+++.||||++.+... .....+.+.+|+.++..++||||+++++++.+...+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            579999999999999999999999999999999976432 2334456888999999999999999999999999999999


Q ss_pred             hhhh-cccc
Q psy18060         88 EFAH-MSLS   95 (549)
Q Consensus        88 ey~~-~sLs   95 (549)
                      ||+. ++|.
T Consensus        81 e~~~g~~L~   89 (331)
T cd05597          81 DYYVGGDLL   89 (331)
T ss_pred             ecCCCCcHH
Confidence            9974 4443


No 498
>KOG1187|consensus
Probab=99.07  E-value=9.4e-11  Score=123.13  Aligned_cols=90  Identities=31%  Similarity=0.464  Sum_probs=74.8

Q ss_pred             ccccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCCChhhhhhHHHHHHHHHhcCCCCcccccccccccc-c
Q psy18060          4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGRSGKELSSLKQECEIQKHLAHPNIIKFIASHETLN-E   82 (549)
Q Consensus         4 ~~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-~   82 (549)
                      +..+.++|..-..||+|+||.||+|.... |..||||++.......  ...|.+|++++++++|||+|+|+|+|.+.+ .
T Consensus        70 l~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~  146 (361)
T KOG1187|consen   70 LRKATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEH  146 (361)
T ss_pred             HHHHHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCce
Confidence            34566889999999999999999998765 4899999887654332  234999999999999999999999999888 4


Q ss_pred             eehhhhhhh-ccccc
Q psy18060         83 FVLITEFAH-MSLSK   96 (549)
Q Consensus        83 ~~lv~ey~~-~sLsk   96 (549)
                      ..+|+||+. +||..
T Consensus       147 ~~LVYEym~nGsL~d  161 (361)
T KOG1187|consen  147 RLLVYEYMPNGSLED  161 (361)
T ss_pred             EEEEEEccCCCCHHH
Confidence            999999985 56644


No 499
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.07  E-value=1.3e-10  Score=122.73  Aligned_cols=92  Identities=21%  Similarity=0.309  Sum_probs=77.6

Q ss_pred             ccccccCeeeeeeecccCceEEEEEEECCCCceEEEEEeccCCC-ChhhhhhHHHHHHHHHhcCCCCccccccccccccc
Q psy18060          4 SNGALEKYQKICLIGEGSFGKVFKAIHLDLKKTVALKIISKSGR-SGKELSSLKQECEIQKHLAHPNIIKFIASHETLNE   82 (549)
Q Consensus         4 ~~~~~~~y~~~~~IG~G~fG~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~   82 (549)
                      .....++|++.+.||+|+||.||+|+++.+++.||+|++.+... .......+.+|+.+++.++||||+++++++.+...
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            34456789999999999999999999999999999999976432 22334567889999999999999999999999999


Q ss_pred             eehhhhhhh-cccc
Q psy18060         83 FVLITEFAH-MSLS   95 (549)
Q Consensus        83 ~~lv~ey~~-~sLs   95 (549)
                      +++||||+. ++|.
T Consensus       118 ~~lv~Ey~~gg~L~  131 (370)
T cd05621         118 LYMVMEYMPGGDLV  131 (370)
T ss_pred             EEEEEcCCCCCcHH
Confidence            999999984 4553


No 500
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07  E-value=1.5e-09  Score=101.27  Aligned_cols=132  Identities=20%  Similarity=0.248  Sum_probs=95.1

Q ss_pred             EEEecCCcEEEEEEEEcCCCceEEEEE-EecCCCChHH-----HHHHHHHHHHHHhcCCCCeeEEEEEEeeCCEEEEEEe
Q psy18060        125 CLIGEGSFGKVFKAIHLDLKKTVALKI-ISKSGRSGKE-----LSSLKQECEIQKHLAHPNIIKFIASHETLNEFVLITE  198 (549)
Q Consensus       125 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~-i~~~~~~~~~-----~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iV~E  198 (549)
                      ..+++|+=+.++.+...  |..+++|. +++.-..+..     ...-.+|++++.++.--.|..-+=++.+.+...|+||
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            35788999999988654  44566664 3332222221     2345689999998865555443333445566679999


Q ss_pred             cCCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccCCcEEEecCCcEEEeeccccee
Q psy18060        199 FAHMS-LSNLLEQRKKLSETICVQILSNLISALYYLHSNRVLHRDLKPQNVLLNKDGVAMLCDFGFARS  266 (549)
Q Consensus       199 ~~~gs-L~~~l~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIiHrDIKP~NILl~~~g~vKL~DFGla~~  266 (549)
                      |.+|. |.+.+...       ...++..+-.-+.-||..||+|+||.++||++..++ +.++|||++..
T Consensus        80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99985 67788765       245677777888899999999999999999997765 99999999864


Done!