BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18065
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNLY 59
A C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+LY
Sbjct: 91 ASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLY 150
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--ANPST 117
P L+ A D+++F W V +VY++ GL +LQEL+K P + IR A+
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKD 210
Query: 118 YRNVLREIRQKEIFNLIIDTS 138
+ +L+E+++ + F++I D S
Sbjct: 211 AKPLLKEMKRGKEFHVIFDCS 231
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNLY 59
A C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+LY
Sbjct: 91 ASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLY 150
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--ANPST 117
P L+ A D+++F W V +VY++ GL +LQEL+K P + IR A+
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKD 210
Query: 118 YRNVLREIRQKEIFNLIIDTS 138
+ +L+E+++ + F++I D S
Sbjct: 211 AKPLLKEMKRGKEFHVIFDCS 231
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNLY 59
A C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+LY
Sbjct: 91 ASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLY 150
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--ANPST 117
P L+ A D+++F W V +VY++ GL +LQEL+K P + IR A+
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKD 210
Query: 118 YRNVLREIRQKEIFNLIIDTS 138
+ +L+E+++ + F++I D S
Sbjct: 211 AKPLLKEMKRGKEFHVIFDCS 231
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNLY 59
A C QL GV A+FGPS + VQSIC AL VPH+++R ++ N F V+LY
Sbjct: 91 ASKKACDQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQVSDNKDSFYVSLY 150
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--ANPST 117
P L+ A D+++F W V +VY++ GL +LQEL+K P + IR A+
Sbjct: 151 PDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNLRLKIRQLPADTKD 210
Query: 118 YRNVLREIRQKEIFNLIIDTS 138
+ +L+E+++ + F++I D S
Sbjct: 211 AKPLLKEMKRGKEFHVIFDCS 231
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDL-ELNSKE-FSVNLY 59
A C QL GV ALFGPS + VQSIC AL+VPH+++R ++S++ F +NLY
Sbjct: 92 ASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYINLY 151
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHANPST-- 117
P ++ A D++ + NW V +VYE+ GL +LQEL+K P ++ IR P+
Sbjct: 152 PDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPPANKD 211
Query: 118 YRNVLREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ +L+E+++ + F +I D S ++ + +
Sbjct: 212 AKPLLKEMKKSKEFYVIFDCSHETAAEILKQI 243
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSV 56
A C QL GV A+FGPS VQSIC AL+VPH++ R LD N F V
Sbjct: 94 ATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYV 150
Query: 57 NLYPSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--AN 114
NLYP L+ A D++++L W +VY++ GL +LQEL+ P + IR +
Sbjct: 151 NLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPVD 210
Query: 115 PSTYRNVLREIRQKEIFNLIIDTSTTHISQFFR 147
R +L+E+++ F +I D S T +Q +
Sbjct: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILK 243
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDL-ELNSKE-FSVNLY 59
A C QL GV ALFGPS + VQSIC AL+VPH+++R +++K+ F +NLY
Sbjct: 92 ASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLY 151
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHANPSTYR 119
P ++ A D++ + NW V +VYE+ GL +LQEL+K P ++ IR PS +
Sbjct: 152 PDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQL-PSGNK 210
Query: 120 N---VLREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ +L+E+++ + F +I D S ++ + +
Sbjct: 211 DAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 243
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 6/153 (3%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDL-ELNSKE-FSVNLY 59
A C QL GV ALFGPS + VQSIC AL+VPH+++R +++K+ F +NLY
Sbjct: 92 ASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLY 151
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHANPSTYR 119
P ++ A D++ + NW V +VYE+ GL +LQEL+K P ++ IR PS +
Sbjct: 152 PDYAAISRAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQL-PSGNK 210
Query: 120 N---VLREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ +L+E+++ + F +I D S ++ + +
Sbjct: 211 DAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 243
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSV 56
A C QL GV A+FGPS VQSIC AL+VPH++ R LD N F V
Sbjct: 94 ATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYV 150
Query: 57 NLYPSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--AN 114
NLYP L+ A D++++L W +VY++ GL +LQEL+ P + IR +
Sbjct: 151 NLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPID 210
Query: 115 PSTYRNVLREIRQKEIFNLIIDTSTTHISQFFR 147
R +L+E+++ F +I D S T +Q +
Sbjct: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILK 243
>sp|Q60934|GRIK1_MOUSE Glutamate receptor ionotropic, kainate 1 OS=Mus musculus GN=Grik1
PE=2 SV=2
Length = 836
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLEL--NSKEFSVNLY 59
A C QL GV ALFGPS + VQSIC AL+VPH+++R N F +NLY
Sbjct: 92 ASRRACDQLALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNRDLFYINLY 151
Query: 60 PSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHANPSTYR 119
P ++ A D++ + NW V +VYE+ GL +LQEL+K P ++ IR PS +
Sbjct: 152 PDYAAISRAVLDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQL-PSGNK 210
Query: 120 N---VLREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ +L+E+++ + F +I D S ++ + +
Sbjct: 211 DAKPLLKEMKKGKEFYVIFDCSHETAAEILKQI 243
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSV 56
A C QL GV A+FGPS VQSIC AL+VPH++ R LD N F V
Sbjct: 94 ATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYV 150
Query: 57 NLYPSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--AN 114
NLYP L+ A D+++ L W +VY++ GL +LQEL+ P + IR +
Sbjct: 151 NLYPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPID 210
Query: 115 PSTYRNVLREIRQKEIFNLIIDTSTTHISQFFR 147
R +L+E+++ F +I D S T +Q +
Sbjct: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILK 243
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 2 AEATMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESR-----LDLELNSKEFSV 56
A C QL GV A+FGPS VQSIC AL+VPH++ R LD N F V
Sbjct: 94 ATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLD---NKDTFYV 150
Query: 57 NLYPSQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRH--AN 114
NLYP L+ A D+++ L W +VY++ GL +LQEL+ P + IR +
Sbjct: 151 NLYPDYASLSHAILDLVQSLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPID 210
Query: 115 PSTYRNVLREIRQKEIFNLIIDTSTTHISQFFR 147
R +L+E+++ F +I D S T +Q +
Sbjct: 211 SDDSRPLLKEMKRGREFRIIFDCSHTMAAQILK 243
>sp|P26591|GLRK_LYMST Glutamate receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 917
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
+C L G A+FG S+A +QS + +VP + + + NS S +Y +
Sbjct: 79 LCHHLSRGDLAIFGVSNASSLATIQSYTDTFNVPFVTISM-AQNNSHNGSYQIYMRPMYI 137
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK 99
NA DVI W KVA Y+ D GL +LQ+L +
Sbjct: 138 NA-LVDVIVHYRWEKVAFYYDSDEGLVRLQQLFQ 170
>sp|Q16478|GRIK5_HUMAN Glutamate receptor ionotropic, kainate 5 OS=Homo sapiens GN=GRIK5
PE=2 SV=2
Length = 980
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPH-VQSICEALDVPHMESRLD--LELNSKEF-SVNLYP 60
TMC+ L GV ++ GPS + V IC ++PH++ + L F SV+LYP
Sbjct: 81 TMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYP 140
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S + ++ A +++ N+ +++ + L +L+ELV+ + TL M +P+
Sbjct: 141 SNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPT 200
Query: 117 TYRNVLREIRQKEIFNLIIDTSTT 140
+L+EIR ++ +IID + +
Sbjct: 201 P---LLKEIRDDKVSTIIIDANAS 221
>sp|Q63273|GRIK5_RAT Glutamate receptor ionotropic, kainate 5 OS=Rattus norvegicus
GN=Grik5 PE=1 SV=1
Length = 979
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPH-VQSICEALDVPHMESRLD--LELNSKEF-SVNLYP 60
TMC+ L GV ++ GPS + V IC ++PH++ + L F SV+LYP
Sbjct: 81 TMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYP 140
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S + ++ A +++ N+ +++ + L +L+ELV+ + TL M +P+
Sbjct: 141 SNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPT 200
Query: 117 TYRNVLREIRQKEIFNLIIDTSTT 140
+L+EIR ++ +IID + +
Sbjct: 201 P---LLKEIRDDKVSTIIIDANAS 221
>sp|Q61626|GRIK5_MOUSE Glutamate receptor ionotropic, kainate 5 OS=Mus musculus GN=Grik5
PE=2 SV=2
Length = 979
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPH-VQSICEALDVPHMESRLD--LELNSKEF-SVNLYP 60
TMC+ L GV ++ GPS + V IC ++PH++ + L F SV+LYP
Sbjct: 81 TMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYP 140
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S + ++ A +++ N+ +++ + L +L+ELV+ + TL M +P+
Sbjct: 141 SNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPT 200
Query: 117 TYRNVLREIRQKEIFNLIIDTSTT 140
+L+EIR ++ +IID + +
Sbjct: 201 P---LLKEIRDDKVSTIIIDANAS 221
>sp|P23819|GRIA2_MOUSE Glutamate receptor 2 OS=Mus musculus GN=Gria2 PE=1 SV=3
Length = 883
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C L V + + + F + + P L
Sbjct: 77 FCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-GTHPFVIQMRPD---L 132
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHAN----PSTY 118
A +I + W K A +Y+ D GL LQ ++ + K T + + + N TY
Sbjct: 133 KGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETY 192
Query: 119 RNVLREIRQKEIFNLIID 136
R++ +++ K+ +I+D
Sbjct: 193 RSLFQDLELKKERRVILD 210
>sp|P19491|GRIA2_RAT Glutamate receptor 2 OS=Rattus norvegicus GN=Gria2 PE=1 SV=2
Length = 883
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 11/138 (7%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C L V + + + F + + P L
Sbjct: 77 FCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-GTHPFVIQMRPD---L 132
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHAN----PSTY 118
A +I + W K A +Y+ D GL LQ ++ + K T + + + N TY
Sbjct: 133 KGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETY 192
Query: 119 RNVLREIRQKEIFNLIID 136
R++ +++ K+ +I+D
Sbjct: 193 RSLFQDLELKKERRVILD 210
>sp|Q5R4M0|GRIA2_PONAB Glutamate receptor 2 OS=Pongo abelii GN=GRIA2 PE=2 SV=1
Length = 883
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C L V + + + F + + P L
Sbjct: 77 FCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-GTHPFVIQMRPD---L 132
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHAN----PSTY 118
A +I + W K A +Y+ D GL LQ ++ + K T + + + N Y
Sbjct: 133 KGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMY 192
Query: 119 RNVLREIRQKEIFNLIID 136
R++ +++ K+ +I+D
Sbjct: 193 RSLFQDLELKKERRVILD 210
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2 PE=1 SV=3
Length = 883
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C L V + + + F + + P L
Sbjct: 77 FCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-GTHPFVIQMRPD---L 132
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHAN----PSTY 118
A +I + W K A +Y+ D GL LQ ++ + K T + + + N Y
Sbjct: 133 KGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMY 192
Query: 119 RNVLREIRQKEIFNLIID 136
R++ +++ K+ +I+D
Sbjct: 193 RSLFQDLELKKERRVILD 210
>sp|Q38PU7|GRIA2_MACFA Glutamate receptor 2 OS=Macaca fascicularis GN=GRIA2 PE=2 SV=1
Length = 883
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C L V + + + F + + P L
Sbjct: 77 FCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTD-GTHPFVIQMRPD---L 132
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHAN----PSTY 118
A +I + W K A +Y+ D GL LQ ++ + K T + + + N Y
Sbjct: 133 KGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMY 192
Query: 119 RNVLREIRQKEIFNLIID 136
R++ +++ K+ +I+D
Sbjct: 193 RSLFQDLELKKERRVILD 210
>sp|Q38PU8|GRIA1_MACFA Glutamate receptor 1 OS=Macaca fascicularis GN=GRIA1 PE=2 SV=1
Length = 906
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG + + S C AL V + ++ S +F + L P L
Sbjct: 74 FCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVD-TSNQFVLQLRPE---L 129
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A +I W K +Y+ D GL LQ+++ T T + I YR +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTTEEGYRMLF 189
Query: 123 REIRQKEIFNLIIDTSTTHIS 143
+++ +K+ +++D + ++
Sbjct: 190 QDLEKKKERLVVVDCESERLN 210
>sp|P42261|GRIA1_HUMAN Glutamate receptor 1 OS=Homo sapiens GN=GRIA1 PE=1 SV=2
Length = 906
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG + + S C AL V + ++ S +F + L P L
Sbjct: 74 FCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVD-TSNQFVLQLRPE---L 129
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A +I W K +Y+ D GL LQ+++ T T + I YR +
Sbjct: 130 QDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTTEEGYRMLF 189
Query: 123 REIRQKEIFNLIIDTSTTHIS 143
+++ +K+ +++D + ++
Sbjct: 190 QDLEKKKERLVVVDCESERLN 210
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQ-SICEALDVPHMESRLD--LELNSKEFS-VNLYP 60
TMC+ L GV A+ GPS + + +IC +VPH + + ++ + F+ +NL+P
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVKFQFQRFTTLNLHP 141
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S ++ A ++ F N T ++ + L L++L++ + TL M +P+
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDTLSVRMLDDTRDPT 201
Query: 117 TYRNVLREIRQKEIFNLII--DTSTTH 141
+L+EIR + +II + S +H
Sbjct: 202 P---LLKEIRDDKTATIIIHANASMSH 225
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQ-SICEALDVPHMESRLD--LELNSKEFS-VNLYP 60
TMC+ L GV A+ GPS + + +IC +VPH + + ++ + F+ +NL+P
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVKFQFQRFTTLNLHP 141
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S ++ A ++ F N T ++ + L L++L++ + TL M +P+
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDTLSVRMLDDTRDPT 201
Query: 117 TYRNVLREIRQKEIFNLII--DTSTTH 141
+L+EIR + +II + S +H
Sbjct: 202 P---LLKEIRDDKTATIIIHANASMSH 225
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQ-SICEALDVPHMESRLD--LELNSKEFS-VNLYP 60
TMC+ L GV A+ GPS + + +IC +VPH + + + + F+ +NL+P
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHP 141
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S ++ A ++ F N T ++ + L L++L++ + TL M +P+
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDTLSVRMLDDTRDPT 201
Query: 117 TYRNVLREIRQKEIFNLII--DTSTTH 141
+L+EIR + +II + S +H
Sbjct: 202 P---LLKEIRDDKTATIIIHANASMSH 225
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQ-SICEALDVPHMESRLD--LELNSKEFS-VNLYP 60
TMC+ L GV A+ GPS + + +IC +VPH + + + + F+ +NL+P
Sbjct: 82 TMCQILPKGVVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHP 141
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVK----TPPTLKTEMYIRHANPS 116
S ++ A ++ F N T ++ + L L++L++ + TL M +P+
Sbjct: 142 SNTDISVAVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDTLSVRMLDDTRDPT 201
Query: 117 TYRNVLREIRQKEIFNLII--DTSTTH 141
+L+EIR + +II + S +H
Sbjct: 202 P---LLKEIRDDKTATIIIHANASMSH 225
>sp|P23818|GRIA1_MOUSE Glutamate receptor 1 OS=Mus musculus GN=Gria1 PE=1 SV=1
Length = 907
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG + + S C AL V + ++ S +F + L P L
Sbjct: 74 FCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVD-TSNQFVLQLRPE---L 129
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A +I W +Y+ D GL LQ ++ T T + I YR +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVNILTTTEEGYRMLF 189
Query: 123 REIRQKEIFNLIIDTSTTHIS 143
+++ +K+ +++D + ++
Sbjct: 190 QDLEKKKERLVVVDCESERLN 210
>sp|P19493|GRIA4_RAT Glutamate receptor 4 OS=Rattus norvegicus GN=Gria4 PE=1 SV=1
Length = 902
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C AL + + E S +F + L PS L
Sbjct: 83 FCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTEGES-QFVLQLRPS---L 138
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A ++ W +Y+ D G LQ +++ + + + + N +YR +L
Sbjct: 139 RGALLSLLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLL 198
Query: 123 REIRQKEIFNLIID 136
E+ +++ +ID
Sbjct: 199 EELDRRQEKKFVID 212
>sp|Q9Z2W8|GRIA4_MOUSE Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
Length = 902
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C AL + + E S +F + L PS L
Sbjct: 83 FCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTEGES-QFVLQLRPS---L 138
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A ++ W +Y+ D G LQ +++ + + + + N +YR +L
Sbjct: 139 RGALLSLLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLL 198
Query: 123 REIRQKEIFNLIID 136
E+ +++ +ID
Sbjct: 199 EELDRRQEKKFVID 212
>sp|P48058|GRIA4_HUMAN Glutamate receptor 4 OS=Homo sapiens GN=GRIA4 PE=2 SV=2
Length = 902
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 7/134 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + S C AL + + E S +F + L PS L
Sbjct: 83 FCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTEGES-QFVLQLRPS---L 138
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A ++ W +Y+ D G LQ +++ + + + + N +YR +L
Sbjct: 139 RGALLSLLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLL 198
Query: 123 REIRQKEIFNLIID 136
E+ +++ +ID
Sbjct: 199 EELDRRQEKKFVID 212
>sp|P19490|GRIA1_RAT Glutamate receptor 1 OS=Rattus norvegicus GN=Gria1 PE=1 SV=2
Length = 907
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG + + S C AL V + ++ S +F + L P L
Sbjct: 74 FCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVD-TSNQFVLQLRPE---L 129
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNVL 122
A +I W +Y+ D GL LQ ++ T T + I YR +
Sbjct: 130 QEALISIIDHYKWQTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVNILTTTEEGYRMLF 189
Query: 123 REIRQKEIFNLIIDTSTTHIS 143
+++ +K+ +++D + ++
Sbjct: 190 QDLEKKKERLVVVDCESERLN 210
>sp|Q38PU5|GRIA4_MACFA Glutamate receptor 4 OS=Macaca fascicularis GN=GRIA4 PE=2 SV=1
Length = 902
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKL 64
C Q GV A+FG D + S C AL + + E S +F + L PS
Sbjct: 82 AFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSFPTEGES-QFVLQLRPS--- 137
Query: 65 LNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLK---TEMYIRHANPSTYRNV 121
L A ++ W +Y+ D G LQ +++ + + + + N +YR +
Sbjct: 138 LRGALLSLLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQL 197
Query: 122 LREIRQKEIFNLIID 136
L E+ +++ +ID
Sbjct: 198 LEELDRRQEKKFVID 212
>sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus musculus GN=Grm1 PE=2 SV=2
Length = 1199
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + D+P + S ++L+ K ++ + + PS L A
Sbjct: 156 IAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAM 215
Query: 70 KDVIRFLNWTKVAIVYEEDN----GLFKLQEL 97
D+++ NWT V+ V+ E N G+ +EL
Sbjct: 216 LDIVKRYNWTYVSAVHTEGNYGESGMDAFKEL 247
>sp|Q13255|GRM1_HUMAN Metabotropic glutamate receptor 1 OS=Homo sapiens GN=GRM1 PE=1 SV=3
Length = 1194
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + D+P + S ++L+ K ++ + + PS L A
Sbjct: 156 IAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAM 215
Query: 70 KDVIRFLNWTKVAIVYEEDN----GLFKLQEL 97
D+++ NWT V+ V+ E N G+ +EL
Sbjct: 216 LDIVKRYNWTYVSAVHTEGNYGESGMDAFKEL 247
>sp|P23385|GRM1_RAT Metabotropic glutamate receptor 1 OS=Rattus norvegicus GN=Grm1 PE=1
SV=1
Length = 1199
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + D+P + S ++L+ K ++ + + PS L A
Sbjct: 156 IAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAM 215
Query: 70 KDVIRFLNWTKVAIVYEEDN----GLFKLQEL 97
D+++ NWT V+ V+ E N G+ +EL
Sbjct: 216 LDIVKRYNWTYVSAVHTEGNYGESGMDAFKEL 247
>sp|P19492|GRIA3_RAT Glutamate receptor 3 OS=Rattus norvegicus GN=Gria3 PE=1 SV=1
Length = 888
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + + S C AL + + + +F + + P+ L
Sbjct: 84 FCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADV-QFVIQMRPA---L 139
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHA----NPSTYRNV 121
A ++ + W K +Y+ + G LQ +++ ++ R + +R +
Sbjct: 140 KGAILSLLSYYKWEKFVYLYDTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRI 199
Query: 122 LREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ E+ +++ +ID I+ V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQV 227
>sp|Q9Z2W9|GRIA3_MOUSE Glutamate receptor 3 OS=Mus musculus GN=Gria3 PE=1 SV=2
Length = 888
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + + S C AL + + + +F + + P+ L
Sbjct: 84 FCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADV-QFVIQMRPA---L 139
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHA----NPSTYRNV 121
A ++ + W K +Y+ + G LQ +++ ++ R + +R +
Sbjct: 140 KGAILSLLGYYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDIQEFRRI 199
Query: 122 LREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ E+ +++ +ID I+ V
Sbjct: 200 IEEMDRRQEKRYLIDCEVERINTILEQV 227
>sp|Q38PU6|GRIA3_MACFA Glutamate receptor 3 OS=Macaca fascicularis GN=GRIA3 PE=2 SV=1
Length = 894
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLL 65
C Q GV A+FG D + + S C AL + + + +F + + P+ L
Sbjct: 90 FCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADV-QFVIQMRPA---L 145
Query: 66 NAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHA----NPSTYRNV 121
A ++ W K +Y+ + G LQ +++ ++ R + +R +
Sbjct: 146 KGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRI 205
Query: 122 LREIRQKEIFNLIIDTSTTHISQFFRAV 149
+ E+ +++ +ID I+ V
Sbjct: 206 IEEMDRRQEKRYLIDCEVERINTILEQV 233
>sp|P42263|GRIA3_HUMAN Glutamate receptor 3 OS=Homo sapiens GN=GRIA3 PE=1 SV=2
Length = 894
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 59/149 (39%), Gaps = 8/149 (5%)
Query: 5 TMCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKL 64
C Q GV A+FG D + + S C AL + + + +F + + P+
Sbjct: 89 AFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADV-QFVIQMRPA--- 144
Query: 65 LNAAFKDVIRFLNWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHA----NPSTYRN 120
L A ++ W K +Y+ + G LQ +++ ++ R + +R
Sbjct: 145 LKGAILSLLGHYKWEKFVYLYDTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRR 204
Query: 121 VLREIRQKEIFNLIIDTSTTHISQFFRAV 149
++ E+ +++ +ID I+ V
Sbjct: 205 IIEEMDRRQEKRYLIDCEVERINTILEQV 233
>sp|P31424|GRM5_RAT Metabotropic glutamate receptor 5 OS=Rattus norvegicus GN=Grm5 PE=1
SV=2
Length = 1203
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + ++P + S ++L+ K ++ + + PS A
Sbjct: 142 IVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAM 201
Query: 70 KDVIRFLNWTKVAIVYEEDN 89
D+++ NWT V+ V+ E N
Sbjct: 202 VDIVKRYNWTYVSAVHTEGN 221
>sp|P41594|GRM5_HUMAN Metabotropic glutamate receptor 5 OS=Homo sapiens GN=GRM5 PE=1 SV=2
Length = 1212
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + ++P + S ++L+ K ++ + + PS A
Sbjct: 143 IVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAM 202
Query: 70 KDVIRFLNWTKVAIVYEEDN 89
D+++ NWT V+ V+ E N
Sbjct: 203 VDIVKRYNWTYVSAVHTEGN 222
>sp|Q3UVX5|GRM5_MOUSE Metabotropic glutamate receptor 5 OS=Mus musculus GN=Grm5 PE=2 SV=2
Length = 1203
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 14 VQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSK---EFSVNLYPSQKLLNAAF 69
+ + GP + + VQ++ + ++P + S ++L+ K ++ + + PS A
Sbjct: 142 IVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAM 201
Query: 70 KDVIRFLNWTKVAIVYEEDN 89
D+++ NWT V+ V+ E N
Sbjct: 202 VDIVKRYNWTYVSAVHTEGN 221
>sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2
Length = 912
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 16 ALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSKEFS--VNLYPSQKLLNAAFKDV 72
A+ GP +++ + + L VP + + LD L++ +F V PS L A ++
Sbjct: 97 AIIGPQTSIMAHVLSHLANELSVPMLSFTALDPSLSALQFPFFVQTAPSDLFLMRAIAEM 156
Query: 73 IRFLNWTKVAIVYEED----NGLFKLQE 96
I + W++V +Y +D NG+ L +
Sbjct: 157 ISYYGWSEVIALYNDDDNSRNGITALGD 184
>sp|Q7XJL2|GLR31_ARATH Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2
Length = 921
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 10 LQNGVQALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSKEFS--VNLYPSQKLLN 66
++ V A+ GP +++ + + L VP + + LD L+ +F V PS L
Sbjct: 91 METDVVAIIGPQTSIMAHVLSHLANELTVPMLSFTALDPTLSPLQFPFFVQTAPSDLFLM 150
Query: 67 AAFKDVIRFLNWTKVAIVYEEDN 89
A ++I + W+ V +Y +D+
Sbjct: 151 RAIAEMITYYGWSDVVALYNDDD 173
>sp|Q03445|GLK1_DROME Glutamate receptor 1 OS=Drosophila melanogaster GN=Glu-RI PE=2 SV=2
Length = 991
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 6 MCRQLQNGVQALFGPSDALLGPHVQSICEALDVPHM-----ESRLDLELNSKEFSVNLYP 60
+C Q GV ++ G + S +P + E L +F++++ P
Sbjct: 94 ICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLAPSSGLLDFAISMRP 153
Query: 61 SQKLLNAAFKDVIRFLNWTKVAIVYEEDNGLFKL----QELVKTPPTLKTEMYIRHAN 114
+ A D I++ W + +Y+ +GL +L QEL T + +M R AN
Sbjct: 154 D---YHQAIIDTIQYYGWQSIIYLYDSHDGLLRLQQIYQELKPGNETFRVQMVKRIAN 208
>sp|Q0DCM5|MAN6_ORYSJ Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica
GN=MAN6 PE=2 SV=2
Length = 440
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 13 GVQALFGPSDALL-----GPHVQSICEALDVPHMESRLDLELNSKEFSVNLYPSQKLLNA 67
G + +GP A G S+C +D SV+ YP L A
Sbjct: 259 GTEGFYGPGIAERLGVNPGEWAASLCSDFIQNSAVEHIDFA------SVHAYPDSWLPRA 312
Query: 68 AFKDVIRFL-NWTKVAIVYEEDNGLFKLQELVKTPPTLKTEMYIRHANPSTYRNVLREIR 126
+ ++ +R+L NW D+ L ++++K P Y++H++ ++ V R+I
Sbjct: 313 SLEEKVRYLSNWV--------DSHLNDSEQILKKPVLFTEVGYLQHSDANSNSTVDRDII 364
Query: 127 QKEIFNLIIDTS 138
+ +++ I D++
Sbjct: 365 LRIVYDKIYDSA 376
>sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1
Length = 903
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 16 ALFGPSDALLGPHVQSICEALDVPHME-SRLDLELNSKEFSVNLYPSQKLL--NAAFKDV 72
A+ GP + V + L +P + S D ++ +F + SQ L AA D+
Sbjct: 97 AIIGPQRSTTARVVAHVATELKIPILSFSATDPTMSPLQFPFFIRTSQNDLFQMAAIADI 156
Query: 73 IRFLNWTKVAIVYEEDN 89
++F W +V +Y +D+
Sbjct: 157 VQFYGWREVVAIYGDDD 173
>sp|A7A283|IRC6_YEAS7 Increased recombination centers protein 6 OS=Saccharomyces
cerevisiae (strain YJM789) GN=IRC6 PE=3 SV=1
Length = 237
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 63 KLLNAAFKDVIRFLNWTKVAIV-----YEEDNGLFKLQELVKTPPTLKTEM 108
++ + AF +VI F+NW + Y E GL ++QE++ T LK E+
Sbjct: 133 EIWSNAFTNVIEFVNWKRSKPTVNHNDYGEKLGLDRIQEIIDTHDWLKCEV 183
>sp|Q11I86|PDXJ_MESSB Pyridoxine 5'-phosphate synthase OS=Mesorhizobium sp. (strain
BNC1) GN=pdxJ PE=3 SV=1
Length = 248
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 37 DVPHMESRLDLELNSKEFSVNLYPSQKLL 65
D+PH+ + +D E +EF++ YPS+ L
Sbjct: 56 DLPHIRALIDDEFPDREFNIEGYPSEDFL 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,466,261
Number of Sequences: 539616
Number of extensions: 1899323
Number of successful extensions: 5100
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5040
Number of HSP's gapped (non-prelim): 72
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)