Query psy18070
Match_columns 169
No_of_seqs 192 out of 1639
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 21:52:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 1.3E-30 4.3E-35 232.6 17.8 139 1-156 188-344 (539)
2 3stj_A Protease DEGQ; serine p 100.0 1.1E-30 3.9E-35 221.7 16.4 140 1-156 175-321 (345)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 5.9E-30 2E-34 224.1 14.7 141 1-156 193-340 (451)
4 1lcy_A HTRA2 serine protease; 100.0 3E-29 1E-33 210.9 16.8 149 1-156 161-311 (325)
5 4a8c_A Periplasmic PH-dependen 100.0 1.7E-29 5.9E-34 220.1 14.1 140 1-156 175-321 (436)
6 1te0_A Protease DEGS; two doma 100.0 7.9E-29 2.7E-33 207.5 13.0 140 1-156 153-302 (318)
7 1ky9_A Protease DO, DEGP, HTRA 100.0 4.4E-29 1.5E-33 218.4 10.0 140 1-156 198-344 (448)
8 3num_A Serine protease HTRA1; 99.9 2.1E-28 7.2E-33 206.0 7.3 149 1-156 160-309 (332)
9 3qo6_A Protease DO-like 1, chl 99.9 2.7E-27 9.1E-32 200.6 10.3 135 1-156 168-320 (348)
10 1y8t_A Hypothetical protein RV 99.9 4.7E-26 1.6E-30 190.8 16.6 129 1-155 157-299 (324)
11 2l97_A HTRA, putative serine p 99.7 9.5E-19 3.3E-23 129.8 4.3 108 34-156 2-114 (134)
12 1l1j_A Heat shock protease HTR 99.7 1.1E-17 3.8E-22 135.2 6.1 65 1-69 171-239 (239)
13 3sti_A Protease DEGQ; serine p 99.6 6E-16 2.1E-20 125.5 6.0 62 1-66 175-241 (245)
14 3lgi_A Protease DEGS; stress-s 99.5 1E-14 3.5E-19 117.0 7.1 62 1-66 164-233 (237)
15 2pzd_A Serine protease HTRA2; 99.5 7.7E-14 2.6E-18 99.7 9.7 89 61-156 2-90 (113)
16 2p3w_A Probable serine proteas 99.5 1.8E-13 6.3E-18 97.6 9.0 89 61-156 2-90 (112)
17 3k6y_A Serine protease, possib 99.3 1.9E-12 6.4E-17 103.4 6.0 56 1-56 171-228 (237)
18 2fcf_A Multiple PDZ domain pro 99.1 1.2E-10 4.1E-15 81.4 6.5 82 63-156 14-98 (103)
19 2iwq_A Multiple PDZ domain pro 99.1 3.3E-10 1.1E-14 82.4 7.3 82 63-156 34-118 (123)
20 2rcz_A Tight junction protein 99.0 1.3E-10 4.4E-15 77.3 2.9 77 68-156 1-80 (81)
21 2vz5_A TAX1-binding protein 3; 99.0 3.9E-10 1.3E-14 83.7 4.8 84 61-156 34-123 (139)
22 2eeh_A PDZ domain-containing p 99.0 1.4E-09 4.6E-14 75.8 7.0 73 63-156 20-93 (100)
23 1uit_A Human discs large 5 pro 99.0 1.9E-10 6.4E-15 82.5 2.1 89 52-156 6-100 (117)
24 2as9_A Serine protease; trypsi 99.0 8.4E-10 2.9E-14 86.4 6.1 56 1-56 146-205 (210)
25 3sfj_A TAX1-binding protein 3; 98.9 1.4E-09 4.8E-14 76.0 5.6 83 63-156 17-104 (104)
26 2eaq_A LIM domain only protein 98.9 1.5E-09 5E-14 74.0 5.3 70 63-156 15-88 (90)
27 2w4f_A Protein LAP4; structura 98.9 8E-09 2.7E-13 71.1 7.9 79 63-156 12-92 (97)
28 3cyy_A Tight junction protein 98.8 2E-09 7E-14 73.3 3.5 57 94-156 23-82 (92)
29 2he4_A Na(+)/H(+) exchange reg 98.8 1.4E-08 4.7E-13 69.2 7.7 57 94-156 28-86 (90)
30 2vwr_A Ligand of NUMB protein 98.8 9.7E-09 3.3E-13 70.6 6.6 70 65-156 16-88 (95)
31 1wh1_A KIAA1095 protein; PDZ d 98.8 6.9E-09 2.4E-13 75.1 6.1 76 64-158 31-108 (124)
32 2e7k_A Maguk P55 subfamily mem 98.8 1.1E-08 3.7E-13 70.3 6.6 71 63-157 16-88 (91)
33 1g9o_A NHE-RF; PDZ domain, com 98.8 2.6E-08 8.9E-13 67.8 8.1 56 94-155 27-84 (91)
34 1m5z_A GRIP, AMPA receptor int 98.8 1.7E-08 5.7E-13 68.8 7.0 57 94-156 32-90 (91)
35 2i4s_A General secretion pathw 98.8 7.5E-09 2.5E-13 72.9 5.2 90 42-156 4-95 (105)
36 1x5q_A LAP4 protein; PDZ domai 98.8 1.7E-08 6E-13 71.2 6.8 78 64-156 25-104 (110)
37 2ego_A General receptor for ph 98.8 1.1E-08 3.6E-13 70.7 5.5 77 65-155 16-94 (96)
38 1nf3_C PAR-6B; semi-CRIB motif 98.8 1.6E-09 5.5E-14 79.0 1.4 80 65-156 42-124 (128)
39 2pkt_A PDZ and LIM domain prot 98.8 1.6E-08 5.5E-13 69.0 6.2 57 94-156 27-85 (91)
40 2pa1_A PDZ and LIM domain prot 98.7 1.8E-08 6.1E-13 68.2 6.3 57 94-156 26-84 (87)
41 3r68_A Na(+)/H(+) exchange reg 98.7 1.7E-08 5.7E-13 69.2 5.7 57 94-156 29-87 (95)
42 2v90_A PDZ domain-containing p 98.7 1.9E-08 6.5E-13 69.2 6.1 57 94-156 30-88 (96)
43 2qkv_A Inactivation-NO-after-p 98.7 2.9E-08 1E-12 68.6 7.0 57 94-156 31-90 (96)
44 2ejy_A 55 kDa erythrocyte memb 98.7 2.1E-08 7.3E-13 70.1 6.3 57 94-156 36-95 (97)
45 3i4w_A Disks large homolog 4; 98.7 3.1E-08 1.1E-12 69.0 7.1 57 94-156 35-94 (104)
46 2qg1_A Multiple PDZ domain pro 98.7 2.5E-08 8.7E-13 68.0 6.3 57 94-156 29-88 (92)
47 3tsv_A Tight junction protein 98.7 4.7E-08 1.6E-12 71.0 8.1 57 94-156 51-111 (124)
48 2q3g_A PDZ and LIM domain prot 98.7 2.9E-08 9.9E-13 67.4 6.5 57 94-156 27-85 (89)
49 2uzc_A Human pdlim5, PDZ and L 98.7 2.8E-08 9.5E-13 67.3 6.0 57 94-156 27-85 (88)
50 1rgw_A ZAsp protein; PDZ, cyph 98.7 1.7E-08 5.9E-13 67.8 4.9 57 94-156 25-83 (85)
51 1mfg_A ERB-B2 interacting prot 98.7 5.2E-08 1.8E-12 66.9 7.4 57 93-156 34-92 (95)
52 1wi2_A Riken cDNA 2700099C19; 98.7 3E-08 1E-12 69.5 6.2 70 65-156 27-98 (104)
53 1w9e_A Syntenin 1; cell adhesi 98.7 2.9E-08 9.8E-13 74.9 6.5 70 63-156 14-86 (166)
54 2dls_A PDZ-rhogef, RHO guanine 98.7 5.5E-08 1.9E-12 66.8 6.8 57 94-156 29-86 (93)
55 2q9v_A Membrane-associated gua 98.7 3.5E-08 1.2E-12 67.0 5.7 57 94-156 27-88 (90)
56 1ihj_A INAD; intermolecular di 98.7 2.7E-08 9.2E-13 68.6 5.2 57 94-156 37-96 (98)
57 2jxo_A Ezrin-radixin-moesin-bi 98.7 3.6E-08 1.2E-12 68.1 5.8 56 94-155 33-91 (98)
58 3khf_A Microtubule-associated 98.7 2.7E-08 9.1E-13 68.9 5.1 57 94-156 34-92 (99)
59 1uez_A KIAA1526 protein; PDZ d 98.7 3E-08 1E-12 68.9 5.4 72 64-156 20-92 (101)
60 1kwa_A Hcask/LIN-2 protein; PD 98.7 4.9E-08 1.7E-12 66.5 6.3 69 65-156 13-84 (88)
61 2vsp_A PDZ domain-containing p 98.7 2.1E-08 7.1E-13 68.5 4.5 57 94-156 27-85 (91)
62 2fe5_A Presynaptic protein SAP 98.7 5.1E-08 1.7E-12 66.6 6.4 58 93-156 32-92 (94)
63 1vb7_A PDZ and LIM domain 2; P 98.7 1.7E-08 6E-13 69.3 4.0 57 94-156 30-88 (94)
64 2jil_A GRIP1 protein, glutamat 98.7 3.7E-08 1.2E-12 67.8 5.7 57 94-156 32-91 (97)
65 2f5y_A Regulator of G-protein 98.7 4.5E-08 1.5E-12 66.8 6.1 59 94-158 24-84 (91)
66 2d90_A PDZ domain containing p 98.7 4E-08 1.4E-12 68.4 5.9 57 94-156 30-88 (102)
67 2gzv_A PRKCA-binding protein; 98.6 7E-08 2.4E-12 69.0 7.2 71 64-155 35-108 (114)
68 3kzd_A TIAM-1, T-lymphoma inva 98.6 4.1E-08 1.4E-12 68.6 5.8 50 65-134 20-69 (94)
69 2i04_A Membrane-associated gua 98.6 9.1E-08 3.1E-12 64.2 7.3 56 94-155 25-85 (85)
70 2i1n_A Discs, large homolog 3; 98.6 5.4E-08 1.9E-12 67.6 6.3 59 93-157 33-94 (102)
71 1wif_A RSGI RUH-020, riken cDN 98.6 1.3E-08 4.6E-13 74.6 3.2 67 94-166 49-120 (126)
72 1n7e_A AMPA receptor interacti 98.6 8.8E-08 3E-12 66.0 7.2 57 94-156 30-89 (97)
73 2kv8_A RGS12, regulator of G-p 98.6 2.7E-08 9.2E-13 66.7 4.3 57 94-156 23-81 (83)
74 2awx_A Synapse associated prot 98.6 6.5E-08 2.2E-12 67.7 6.4 58 94-157 33-93 (105)
75 1d5g_A Human phosphatase HPTP1 98.6 7.9E-08 2.7E-12 66.0 6.6 57 94-156 33-92 (96)
76 1q3o_A Shank1; PDZ, GKAP, pept 98.6 6.9E-08 2.4E-12 68.0 6.5 57 94-156 45-103 (109)
77 2yt7_A Amyloid beta A4 precurs 98.6 1.1E-07 3.9E-12 66.2 7.5 73 65-156 21-98 (101)
78 1tp5_A Presynaptic density pro 98.6 8.3E-08 2.8E-12 68.6 6.9 69 66-156 26-97 (119)
79 2byg_A Channel associated prot 98.6 8.5E-08 2.9E-12 68.8 6.9 58 93-156 53-113 (117)
80 3b76_A E3 ubiquitin-protein li 98.6 9.3E-08 3.2E-12 68.9 7.1 58 93-156 52-112 (118)
81 4amh_A Disks large homolog 1; 98.6 7.5E-08 2.6E-12 67.8 6.4 57 94-156 32-91 (106)
82 2opg_A Multiple PDZ domain pro 98.6 8.1E-08 2.8E-12 66.2 6.5 57 94-156 30-89 (98)
83 2eeg_A PDZ and LIM domain prot 98.6 4.1E-08 1.4E-12 67.5 4.9 57 94-156 32-90 (94)
84 1wha_A KIAA0147 protein, scrib 98.6 6.8E-08 2.3E-12 67.6 6.0 57 94-156 38-97 (105)
85 3i18_A LMO2051 protein; alpha- 98.6 1.7E-07 5.7E-12 65.3 8.0 57 93-156 6-64 (100)
86 3e17_A Tight junction protein 98.6 1.5E-08 5.1E-13 69.2 2.5 57 94-156 21-80 (88)
87 2edz_A PDZ domain-containing p 98.6 4.7E-08 1.6E-12 69.5 5.2 57 94-156 38-96 (114)
88 2la8_A Inactivation-NO-after-p 98.6 6E-08 2E-12 68.6 5.7 57 94-156 25-84 (106)
89 1uf1_A KIAA1526 protein; PDZ d 98.6 8.6E-08 2.9E-12 69.5 6.6 57 94-156 46-103 (128)
90 3ngh_A PDZ domain-containing p 98.6 3.6E-08 1.2E-12 69.0 4.5 57 94-156 26-84 (106)
91 1um1_A KIAA1849 protein, RSGI 98.6 8.1E-08 2.8E-12 67.7 6.3 58 93-156 35-95 (110)
92 3o46_A Maguk P55 subfamily mem 98.6 8.1E-08 2.8E-12 65.7 6.1 58 94-157 28-88 (93)
93 2fne_A Multiple PDZ domain pro 98.6 4.2E-08 1.4E-12 70.5 4.8 57 94-156 53-112 (117)
94 3axa_A Afadin, nectin-3, prote 98.6 8.1E-08 2.8E-12 67.3 6.1 58 93-156 37-97 (106)
95 2dkr_A LIN-7 homolog B; LIN-7B 98.6 7.6E-08 2.6E-12 65.6 5.7 57 94-156 30-89 (93)
96 2jik_A Synaptojanin-2 binding 98.6 1.1E-07 3.9E-12 65.9 6.7 58 93-156 36-96 (101)
97 1va8_A Maguk P55 subfamily mem 98.6 1.2E-07 4E-12 67.5 6.6 57 94-156 48-107 (113)
98 1qav_A Alpha-1 syntrophin (res 98.6 1.2E-07 4E-12 64.5 6.3 56 94-155 30-88 (90)
99 1ueq_A Membrane associated gua 98.6 1.9E-07 6.7E-12 67.3 7.7 58 94-157 44-106 (123)
100 2dlu_A INAD-like protein; PDZ 98.6 9.6E-08 3.3E-12 67.4 5.9 57 94-156 38-97 (111)
101 1q7x_A PDZ2B domain of PTP-BAS 98.6 7E-08 2.4E-12 67.8 5.1 58 94-157 42-102 (108)
102 2vsv_A Rhophilin-2; scaffold p 98.6 1.4E-07 4.7E-12 67.3 6.6 58 94-157 44-104 (109)
103 1uhp_A Hypothetical protein KI 98.6 1.2E-07 4E-12 66.6 6.2 59 93-157 40-101 (107)
104 2jre_A C60-1 PDZ domain peptid 98.6 7.1E-08 2.4E-12 67.7 5.0 76 65-156 25-103 (108)
105 1wf8_A Neurabin-I; PDZ domain, 98.6 8.7E-08 3E-12 67.3 5.4 59 93-157 39-100 (107)
106 2kjp_A Uncharacterized protein 98.5 3.5E-08 1.2E-12 68.1 3.1 55 95-156 2-58 (91)
107 3rle_A Golgi reassembly-stacki 98.5 5.1E-08 1.8E-12 76.5 4.4 74 64-156 94-169 (209)
108 1x5n_A Harmonin; PDZ domain, u 98.5 1.6E-07 5.6E-12 66.5 6.5 71 65-156 27-98 (114)
109 2o2t_A Multiple PDZ domain pro 98.5 4.9E-08 1.7E-12 69.6 3.7 57 94-156 49-109 (117)
110 1uju_A Scribble; PDZ domain, c 98.5 2.3E-08 8E-13 70.7 2.0 61 93-159 43-106 (111)
111 1n7t_A 99-MER peptide of densi 98.5 9.3E-08 3.2E-12 66.6 5.1 57 93-156 42-100 (103)
112 2r4h_A Membrane-associated gua 98.5 1.7E-07 5.8E-12 66.5 6.5 57 94-156 49-108 (112)
113 2ehr_A INAD-like protein; PDZ 98.5 1.9E-07 6.7E-12 66.5 6.8 57 94-156 50-109 (117)
114 1v5l_A PDZ and LIM domain 3; a 98.5 5.2E-08 1.8E-12 68.1 3.5 57 94-156 29-87 (103)
115 2kl1_A YLBL protein; structure 98.5 1.2E-07 4.2E-12 65.4 5.3 57 93-156 4-62 (94)
116 1uep_A Membrane associated gua 98.5 1.1E-07 3.9E-12 66.3 5.2 58 94-157 34-96 (103)
117 2h5c_A Alpha-lytic protease; s 98.5 5.7E-08 2E-12 76.1 4.0 31 1-31 131-161 (198)
118 2edp_A Fragment, shroom family 98.5 7.8E-08 2.7E-12 66.9 4.3 57 94-156 35-93 (100)
119 2eno_A Synaptojanin-2-binding 98.5 1.7E-07 5.9E-12 67.1 6.2 60 93-158 46-108 (120)
120 2g5m_B Neurabin-2; spinophilin 98.5 8.6E-08 3E-12 67.9 4.5 60 93-158 34-96 (113)
121 3l4f_D SH3 and multiple ankyri 98.5 2.2E-07 7.4E-12 68.2 6.7 58 94-157 65-124 (132)
122 3qe1_A Sorting nexin-27, G pro 98.5 1.5E-07 5.2E-12 65.9 5.6 57 94-156 43-101 (107)
123 2d8i_A T-cell lymphoma invasio 98.5 5E-08 1.7E-12 70.1 3.1 70 66-156 30-100 (114)
124 2iwn_A Multiple PDZ domain pro 98.5 2.5E-07 8.4E-12 63.2 6.4 76 64-156 14-92 (97)
125 4e34_A Golgi-associated PDZ an 98.5 2E-07 6.8E-12 62.8 5.7 55 94-154 28-85 (87)
126 1wf7_A Enigma homologue protei 98.5 5.4E-08 1.8E-12 67.9 3.0 58 94-157 29-88 (103)
127 2koj_A Partitioning defective 98.5 3.2E-07 1.1E-11 64.6 7.0 74 65-156 22-100 (111)
128 2h2b_A Tight junction protein 98.5 5.7E-07 2E-11 62.9 8.3 57 93-156 38-96 (107)
129 2z17_A Pleckstrin homology SEC 98.5 3E-08 1E-12 69.4 1.5 73 66-152 28-102 (104)
130 2daz_A INAD-like protein; PDZ 98.5 1.4E-07 4.7E-12 68.1 5.0 57 94-156 51-110 (124)
131 3hpk_A Protein interacting wit 98.5 4.4E-07 1.5E-11 65.4 7.6 56 94-155 45-103 (125)
132 1whd_A RGS3, regulator of G-pr 98.5 6.9E-08 2.4E-12 67.2 3.2 57 94-156 36-94 (100)
133 2kom_A Partitioning defective 98.5 3E-07 1E-11 66.2 6.5 57 94-156 58-119 (121)
134 3cbz_A Dishevelled-2; PDZ doma 98.5 1.4E-07 4.9E-12 66.6 4.7 59 94-158 33-97 (108)
135 2djt_A Unnamed protein product 98.5 1.2E-07 4.3E-12 66.0 4.3 57 94-156 38-97 (104)
136 2dm8_A INAD-like protein; PDZ 98.5 1.2E-07 4.1E-12 67.3 4.2 58 94-157 43-103 (116)
137 3nfk_A Tyrosine-protein phosph 98.5 3.5E-08 1.2E-12 69.2 1.4 56 94-155 43-106 (107)
138 1ujd_A KIAA0559 protein; PDZ d 98.5 2.3E-07 7.9E-12 66.3 5.6 57 94-156 49-108 (117)
139 2lob_A Golgi-associated PDZ an 97.8 2E-08 7E-13 71.8 0.0 35 94-134 53-88 (112)
140 2yub_A LIMK-2, LIM domain kina 98.5 1.5E-07 5.2E-12 67.9 4.6 59 93-157 43-105 (118)
141 2dc2_A GOPC, golgi associated 98.5 2.2E-07 7.6E-12 65.0 5.3 58 94-157 35-95 (103)
142 2db5_A INAD-like protein; PDZ 98.5 1.4E-07 4.7E-12 68.4 4.3 58 94-157 54-115 (128)
143 2dmz_A INAD-like protein; PDZ 98.5 2.1E-07 7E-12 67.5 5.3 77 65-157 27-106 (129)
144 1qau_A Neuronal nitric oxide s 98.4 5.3E-07 1.8E-11 63.6 7.2 70 65-156 13-86 (112)
145 2kjd_A Sodium/hydrogen exchang 98.4 4E-07 1.4E-11 65.6 6.7 57 94-156 33-92 (128)
146 2iwo_A Multiple PDZ domain pro 98.4 2.4E-07 8.3E-12 66.8 5.2 57 94-156 53-112 (120)
147 1y7n_A Amyloid beta A4 precurs 98.4 2.5E-07 8.5E-12 63.5 5.0 55 94-155 32-88 (90)
148 3r0h_A INAD, inactivation-NO-a 98.4 5.7E-07 2E-11 69.5 7.5 57 94-156 136-195 (206)
149 3gsl_A Disks large homolog 4; 98.4 4.1E-07 1.4E-11 69.2 6.6 58 93-156 129-189 (196)
150 2i6v_A General secretion pathw 98.4 2.5E-07 8.7E-12 62.7 4.8 57 94-156 19-77 (87)
151 3qik_A Phosphatidylinositol 3, 98.4 2.8E-07 9.4E-12 65.2 5.0 54 94-153 39-97 (101)
152 1v62_A KIAA1719 protein; struc 98.4 2E-07 6.9E-12 66.7 4.4 58 94-157 42-102 (117)
153 3bpu_A Membrane-associated gua 98.4 8.2E-07 2.8E-11 59.9 7.2 55 94-156 27-85 (88)
154 1wfg_A Regulating synaptic mem 98.4 5.2E-07 1.8E-11 65.9 6.4 57 94-156 65-126 (131)
155 2qt5_A Glutamate receptor-inte 98.4 2.2E-07 7.6E-12 71.8 4.7 57 94-156 33-92 (200)
156 3id1_A Regulator of sigma E pr 98.4 2.9E-07 1E-11 63.7 4.7 55 96-156 4-60 (95)
157 2eei_A PDZ domain-containing p 98.4 1.2E-07 4E-12 66.3 2.4 57 94-156 32-90 (106)
158 1uew_A Membrane associated gua 98.4 3.4E-07 1.2E-11 65.0 4.7 57 94-156 43-102 (114)
159 2ea3_A Chymotrypsin; celloulom 98.4 3.9E-07 1.3E-11 70.8 5.4 48 1-49 125-176 (189)
160 1v5q_A GRIP1 homolog, glutamat 98.4 5.6E-07 1.9E-11 64.7 5.6 57 94-156 45-106 (122)
161 2kpk_A Membrane-associated gua 98.3 6.8E-07 2.3E-11 65.0 5.7 58 94-157 43-105 (129)
162 1wfv_A Membrane associated gua 98.3 1.5E-07 5E-12 65.3 2.0 57 94-156 36-95 (103)
163 3egg_C Spinophilin; PP1, serin 98.3 7.5E-07 2.6E-11 68.2 6.0 58 93-156 110-170 (170)
164 2qbw_A PDZ-fibronectin fusion 98.3 1.3E-06 4.4E-11 67.0 7.2 56 93-155 23-80 (195)
165 3gsl_A Disks large homolog 4; 98.3 1.1E-06 3.9E-11 66.7 6.9 58 93-156 34-94 (196)
166 2yuy_A RHO GTPase activating p 98.3 1.1E-07 3.7E-12 68.9 1.0 57 94-156 61-119 (126)
167 4fgm_A Aminopeptidase N family 98.3 1.1E-06 3.9E-11 79.1 7.8 57 94-156 496-553 (597)
168 1x6d_A Interleukin-16; PDZ dom 98.3 3.5E-07 1.2E-11 65.4 3.6 57 94-156 42-102 (119)
169 1um7_A Synapse-associated prot 98.3 3.4E-07 1.1E-11 64.5 3.5 57 94-156 39-98 (113)
170 1i16_A Interleukin 16, LCF; cy 98.3 1.5E-06 5.1E-11 63.3 7.0 57 94-156 57-117 (130)
171 3fan_A Non-structural protein; 98.3 2.6E-07 8.8E-12 73.0 3.0 37 1-37 112-151 (213)
172 2d92_A INAD-like protein; PDZ 98.3 6.1E-07 2.1E-11 63.1 4.7 58 93-156 43-104 (108)
173 2cs5_A Tyrosine-protein phosph 98.3 3.4E-07 1.1E-11 65.4 3.2 59 94-158 41-107 (119)
174 2csj_A TJP2 protein; PDZ domai 98.3 9.7E-07 3.3E-11 62.9 5.4 57 93-156 45-103 (117)
175 3r0h_A INAD, inactivation-NO-a 98.3 1E-06 3.5E-11 68.0 6.0 57 94-156 45-107 (206)
176 2edv_A FERM and PDZ domain-con 98.3 4.5E-07 1.5E-11 62.6 3.5 57 94-157 31-89 (96)
177 1p1d_A PDZ45, glutamate recept 98.3 8.3E-07 2.9E-11 68.5 5.1 57 94-156 135-194 (196)
178 1r6j_A Syntenin 1; PDZ, membra 98.3 2.1E-06 7.3E-11 58.3 6.3 56 95-157 25-82 (82)
179 3k1r_A Harmonin; protein-prote 98.2 1.5E-06 5.1E-11 67.1 6.2 58 94-158 110-169 (192)
180 2zpm_A Regulator of sigma E pr 98.2 8.6E-07 3E-11 60.1 4.2 56 95-156 5-61 (91)
181 3pv2_A DEGQ; trypsin fold, PDZ 98.2 3.9E-07 1.3E-11 79.4 3.0 57 94-156 386-442 (451)
182 3rle_A Golgi reassembly-stacki 98.2 1.2E-06 4.1E-11 68.6 5.6 60 91-156 13-75 (209)
183 1wg6_A Hypothetical protein (r 98.2 6.7E-07 2.3E-11 64.9 3.7 58 94-157 55-122 (127)
184 2hga_A Conserved protein MTH13 98.2 3E-06 1E-10 61.6 7.0 57 93-157 24-82 (125)
185 1vae_A Rhophilin 2, rhophilin, 98.2 5.7E-07 1.9E-11 64.1 2.9 57 94-156 36-95 (111)
186 1b8q_A Protein (neuronal nitri 98.2 7.3E-07 2.5E-11 64.3 3.1 70 65-156 20-93 (127)
187 3tsz_A Tight junction protein 98.2 3.3E-06 1.1E-10 72.4 7.5 57 94-156 31-91 (391)
188 1ujv_A Membrane associated gua 98.2 9E-06 3.1E-10 56.0 8.1 55 94-156 32-90 (96)
189 1wi4_A Synip, syntaxin binding 98.1 2.8E-06 9.5E-11 60.0 5.2 57 94-156 41-104 (109)
190 4a8c_A Periplasmic PH-dependen 98.1 4.3E-06 1.5E-10 72.4 6.9 57 94-156 363-419 (436)
191 2qt5_A Glutamate receptor-inte 98.1 5E-06 1.7E-10 64.0 6.6 58 94-157 135-195 (200)
192 1p1d_A PDZ45, glutamate recept 98.1 3.8E-06 1.3E-10 64.7 5.1 58 94-157 36-98 (196)
193 2w7s_A Serine protease SPLA; h 98.0 3.2E-06 1.1E-10 64.9 4.1 33 1-33 142-174 (200)
194 3shw_A Tight junction protein 98.0 7.4E-06 2.5E-10 71.9 6.9 57 94-156 23-83 (468)
195 1hpg_A Glutamic acid specific 98.0 3.7E-06 1.3E-10 64.9 3.8 30 1-31 131-160 (187)
196 1qtf_A Exfoliative toxin B; se 98.0 1.3E-06 4.4E-11 69.7 1.1 40 2-44 175-214 (246)
197 1v6b_A Harmonin isoform A1; st 98.0 5.6E-06 1.9E-10 59.2 4.1 56 95-156 44-106 (118)
198 4fln_A Protease DO-like 2, chl 98.0 2.2E-05 7.6E-10 70.0 8.5 87 65-157 374-473 (539)
199 1wcz_A Glutamyl endopeptidase; 97.9 1.3E-05 4.4E-10 64.9 5.8 52 1-53 157-210 (268)
200 2krg_A Na(+)/H(+) exchange reg 97.9 2.8E-06 9.7E-11 67.4 1.7 56 94-155 33-91 (216)
201 1z87_A Alpha-1-syntrophin; pro 97.9 7.2E-06 2.5E-10 67.0 4.0 57 94-156 103-162 (263)
202 2o8l_A V8 protease, taphylococ 97.9 1.4E-05 4.8E-10 64.9 5.7 52 1-53 157-210 (274)
203 1agj_A Epidermolytic toxin A; 97.9 1E-05 3.6E-10 63.9 4.7 33 1-33 183-215 (242)
204 1fc6_A Photosystem II D1 prote 97.9 3.3E-05 1.1E-09 65.7 8.0 57 94-156 99-158 (388)
205 2vid_A Serine protease SPLB; h 97.8 1E-05 3.6E-10 61.8 3.2 32 1-32 145-176 (204)
206 1ufx_A KIAA1526 protein; PDZ d 97.8 1.3E-05 4.6E-10 56.0 3.1 35 94-134 32-67 (103)
207 1ky9_A Protease DO, DEGP, HTRA 97.8 3.5E-06 1.2E-10 73.4 0.0 57 94-156 383-439 (448)
208 3k50_A Putative S41 protease; 97.8 2.8E-05 9.7E-10 66.9 5.6 55 95-156 91-145 (403)
209 2xkx_A Disks large homolog 4; 97.8 4.1E-05 1.4E-09 70.1 6.9 57 94-156 331-390 (721)
210 2sga_A Proteinase A; hydrolase 97.7 2.7E-05 9.2E-10 59.1 3.8 31 1-32 125-155 (181)
211 3soe_A Membrane-associated gua 97.6 0.00016 5.3E-09 51.9 7.2 56 94-157 34-93 (113)
212 1mbm_A NSP4 proteinase, chymot 97.6 3.2E-05 1.1E-09 60.2 3.3 33 2-38 106-138 (198)
213 2xkx_A Disks large homolog 4; 97.5 0.00013 4.5E-09 66.8 6.7 58 93-156 183-243 (721)
214 3gge_A PDZ domain-containing p 97.5 0.00042 1.4E-08 48.2 7.7 56 94-155 28-88 (95)
215 2oua_A Serine protease, protei 97.5 6.2E-05 2.1E-09 58.1 3.5 31 1-32 131-161 (188)
216 3suz_A Amyloid beta A4 precurs 97.4 9.3E-05 3.2E-09 63.2 3.6 57 94-156 232-293 (388)
217 2qa9_E Streptogrisin-B; chymot 97.4 0.00013 4.3E-09 55.5 3.8 30 2-32 130-159 (185)
218 1w9e_A Syntenin 1; cell adhesi 97.3 0.00043 1.5E-08 51.7 5.7 34 95-135 109-142 (166)
219 2pfe_A Protease A, alkaline se 97.2 0.0002 7E-09 55.2 3.8 50 1-52 128-179 (186)
220 3suz_A Amyloid beta A4 precurs 97.0 9.2E-05 3.1E-09 63.2 0.0 56 95-156 316-373 (388)
221 1k32_A Tricorn protease; prote 96.9 0.0021 7.3E-08 60.0 7.9 56 94-156 748-814 (1045)
222 1p3c_A Glutamyl-endopeptidase; 95.2 0.012 4.1E-07 45.1 3.2 38 6-43 164-201 (215)
223 1pq7_A Trypsin; ultra-high res 94.1 0.036 1.2E-06 42.6 3.6 26 6-31 173-198 (224)
224 1vcp_A Semliki forest virus ca 94.1 0.062 2.1E-06 38.9 4.4 35 8-42 96-130 (149)
225 2fp7_B Serine protease NS3; fl 94.1 0.019 6.7E-07 43.5 1.8 25 7-31 114-138 (172)
226 1svp_A Sindbis virus capsid pr 93.9 0.067 2.3E-06 39.3 4.4 35 8-42 105-139 (161)
227 3e90_B NS3 protease; trypsin-l 93.9 0.03 1E-06 43.3 2.6 23 7-29 133-155 (198)
228 1ep5_B Capsid protein C, coat 93.9 0.054 1.8E-06 39.7 3.7 36 7-42 102-137 (157)
229 2fom_B Polyprotein; flavivirus 93.8 0.023 8E-07 43.6 1.8 25 7-31 129-153 (185)
230 2ggv_B NS3, non-structural pro 93.8 0.024 8.2E-07 43.4 1.8 25 7-31 128-152 (185)
231 3u1j_B Serine protease NS3; se 93.7 0.034 1.2E-06 42.8 2.6 23 7-29 138-160 (191)
232 4agk_A Capsid protein, coat pr 93.7 0.08 2.7E-06 38.8 4.4 37 6-42 102-138 (158)
233 3h7t_A Group 3 allergen smipp- 93.6 0.14 4.8E-06 39.1 6.0 50 6-56 179-231 (235)
234 2yew_A Capsid protein, coat pr 93.4 0.082 2.8E-06 41.9 4.4 35 8-42 200-234 (253)
235 3lkw_A Fusion protein of nonst 93.3 0.044 1.5E-06 43.4 2.6 22 8-29 180-201 (236)
236 4e7n_A Snake-venom thrombin-li 92.6 0.21 7.2E-06 38.2 5.7 48 7-55 178-230 (238)
237 3s69_A Thrombin-like enzyme de 92.6 0.22 7.6E-06 38.0 5.9 48 7-55 174-226 (234)
238 1kxf_A Sindbis virus capsid pr 92.6 0.098 3.3E-06 41.7 3.7 35 8-42 210-244 (264)
239 3mmg_A Nuclear inclusion prote 92.5 0.18 6.2E-06 40.4 5.2 49 3-51 141-193 (241)
240 3cp7_A Alkaline serine proteas 92.3 0.12 4E-06 40.0 3.9 28 6-33 162-192 (218)
241 3s9c_A Vipera russelli protein 92.3 0.26 8.8E-06 37.7 5.9 49 7-56 174-227 (234)
242 1arb_A Achromobacter protease 92.0 0.097 3.3E-06 42.3 3.2 25 8-32 189-213 (268)
243 2aiq_A Protein C activator; sn 91.9 0.36 1.2E-05 37.1 6.3 49 6-55 170-223 (231)
244 1fxy_A Coagulation factor XA-t 91.6 0.32 1.1E-05 37.3 5.7 45 7-52 175-223 (228)
245 2zch_P Prostate-specific antig 91.3 0.47 1.6E-05 36.5 6.3 46 7-53 183-233 (237)
246 1a7s_A Heparin binding protein 91.2 0.49 1.7E-05 36.1 6.3 49 6-55 168-219 (225)
247 2pka_B Kallikrein A; serine pr 91.1 0.36 1.2E-05 34.9 5.3 44 7-51 98-146 (152)
248 1sgf_A 7S NGF, nerve growth fa 91.0 0.33 1.1E-05 37.5 5.2 45 8-53 187-236 (240)
249 1azz_A Collagenase; complex (s 91.0 0.15 5.2E-06 39.2 3.3 46 7-53 172-222 (226)
250 1fuj_A PR3, myeloblastin; hydr 90.9 0.17 5.6E-06 38.6 3.4 25 6-31 169-193 (221)
251 1ton_A Tonin; hydrolase(serine 90.9 0.42 1.4E-05 36.7 5.7 46 7-53 181-231 (235)
252 1hj8_A Trypsin I; hydrolase, r 90.8 0.17 5.9E-06 38.8 3.3 25 7-32 170-194 (222)
253 1ao5_A Glandular kallikrein-13 90.6 0.5 1.7E-05 36.3 5.9 45 7-52 183-232 (237)
254 1npm_A Neuropsin; serine prote 90.5 0.19 6.4E-06 38.6 3.4 25 6-31 173-197 (225)
255 2qxi_A Kallikrein-7; S1 pocket 90.4 0.43 1.5E-05 36.5 5.3 45 7-52 170-219 (224)
256 1yph_E Chymotrypsin A, chain C 90.4 0.57 1.9E-05 31.4 5.4 26 7-32 41-69 (97)
257 3mfj_A Cationic trypsin; serin 90.3 0.2 6.7E-06 38.5 3.3 25 7-32 171-195 (223)
258 2psx_A Kallikrein-5; zinc inhi 90.1 0.41 1.4E-05 36.7 5.0 45 7-52 173-222 (227)
259 1orf_A Granzyme A; hydrolase-h 89.9 0.55 1.9E-05 36.0 5.6 25 7-32 178-202 (234)
260 1mza_A Pro-granzyme K; apoptos 89.7 0.56 1.9E-05 36.1 5.5 25 7-32 184-208 (240)
261 1spj_A Kallikrein 1; serine pr 89.7 0.63 2.1E-05 35.7 5.8 45 7-52 184-233 (238)
262 1iau_A Granzyme B; hydrolase-h 89.6 0.22 7.5E-06 38.2 3.1 24 7-31 177-200 (227)
263 4i8h_A Cationic trypsin, beta- 89.6 0.22 7.6E-06 37.8 3.1 26 6-32 170-195 (223)
264 2z7f_E Leukocyte elastase; ser 89.4 0.26 8.9E-06 37.5 3.4 25 6-31 166-190 (218)
265 1eq9_A Chymotrypsin; FIRE ANT, 89.4 0.22 7.5E-06 38.1 2.9 25 7-32 172-196 (222)
266 2bdg_A Kallikrein-4; serine pr 89.1 0.26 8.7E-06 37.8 3.1 25 7-32 171-195 (223)
267 1lo6_A Kallikrein 6, HK6; seri 89.0 0.29 9.9E-06 37.5 3.4 24 7-31 170-193 (223)
268 1gvz_A Kallikrein-1E2; antigen 88.6 0.17 5.8E-06 39.0 1.8 45 7-52 183-232 (237)
269 1euf_A Duodenase; serine prote 88.2 0.81 2.8E-05 35.0 5.5 41 10-51 179-221 (227)
270 4ag1_A Chymase; hydrolase-de n 88.0 0.33 1.1E-05 36.9 3.1 26 7-33 176-201 (226)
271 2qy0_B Complement C1R subcompo 87.8 1.1 3.6E-05 34.4 5.9 46 7-52 185-237 (242)
272 1si5_H Scatter factor, hepatoc 87.7 0.89 3.1E-05 35.0 5.5 49 7-55 173-228 (240)
273 2xw9_A Complement factor D; im 87.4 0.3 1E-05 37.3 2.5 24 7-31 177-200 (228)
274 3h7o_A Group 3 allergen smipp- 86.8 0.3 1E-05 37.1 2.2 25 7-32 177-201 (228)
275 1aut_C Activated protein C; se 86.3 1 3.5E-05 34.9 5.1 49 7-55 185-240 (250)
276 3rm2_H Thrombin heavy chain; s 85.7 1.3 4.6E-05 33.9 5.5 46 7-52 199-253 (259)
277 3gov_B MAsp-1; complement, ser 85.6 1.3 4.4E-05 33.8 5.3 46 7-52 192-246 (251)
278 3ncl_A Suppressor of tumorigen 85.0 0.73 2.5E-05 35.2 3.6 26 7-32 185-214 (241)
279 2any_A Kininogenin, plasma kal 84.6 1.6 5.3E-05 33.5 5.4 47 7-53 182-235 (241)
280 2oq5_A Transmembrane protease, 84.1 0.59 2E-05 35.8 2.7 26 7-32 176-205 (232)
281 3beu_A Trypsin, SGT; beta shee 84.0 0.76 2.6E-05 34.8 3.3 26 7-32 167-196 (224)
282 1m9u_A Earthworm fibrinolytic 84.0 0.59 2E-05 35.9 2.7 25 7-31 185-211 (241)
283 2asu_B Hepatocyte growth facto 83.7 1.1 3.6E-05 34.4 4.1 46 7-52 172-224 (234)
284 3gyl_B Prostasin; ENAC, zymoge 83.6 1.5 5.2E-05 33.8 5.0 46 7-52 188-240 (261)
285 1bru_P Elastase, PPE; serine p 83.6 0.63 2.2E-05 35.9 2.7 26 7-32 182-211 (241)
286 2jkh_A Activated factor XA hea 83.5 1.5 5.2E-05 33.6 4.9 48 7-54 179-233 (241)
287 2zgc_A Granzyme M; serine prot 82.4 0.76 2.6E-05 35.5 2.7 47 7-54 176-229 (240)
288 2f9n_A Alpha I tryptase; serin 81.9 2.2 7.4E-05 32.8 5.2 46 8-53 189-241 (245)
289 1ym0_A Fibrinotic enzyme compo 81.8 0.93 3.2E-05 34.6 3.0 27 6-32 181-211 (238)
290 1fon_A Procarboxypeptidase A-S 81.7 0.81 2.8E-05 35.2 2.6 26 7-32 181-210 (240)
291 2f91_A Hepatopancreas trypsin; 81.6 1.2 4.2E-05 34.1 3.6 25 7-31 183-210 (237)
292 2r0l_A Hepatocyte growth facto 81.6 2.3 7.8E-05 32.6 5.2 48 7-54 185-239 (248)
293 1gvk_B Elastase 1, peptide inh 81.0 0.89 3E-05 35.0 2.7 25 7-31 182-209 (240)
294 2jde_A Urokinase-type plasmino 80.7 2.3 7.9E-05 33.2 5.1 46 7-52 215-267 (276)
295 1elt_A Elastase; serine protei 80.4 0.97 3.3E-05 34.6 2.7 25 7-31 181-208 (236)
296 2bz6_H Blood coagulation facto 79.8 1.9 6.4E-05 33.3 4.2 50 7-56 186-242 (254)
297 1yc0_A Hepatocyte growth facto 79.4 2.3 7.7E-05 33.6 4.6 48 7-54 220-274 (283)
298 2hlc_A Collagenase; serine pro 79.2 3 0.0001 31.6 5.2 45 7-51 174-224 (230)
299 2bdy_A Thrombin; thrombin, com 79.1 3.1 0.00011 32.9 5.4 46 7-52 229-283 (289)
300 1z8g_A Serine protease hepsin; 78.9 2.5 8.6E-05 35.0 5.0 47 7-53 302-359 (372)
301 1fiw_A Beta-acrosin heavy chai 78.6 3 0.0001 33.2 5.1 46 7-52 193-247 (290)
302 4dgj_A Enteropeptidase catalyt 78.1 1.2 4.2E-05 33.8 2.6 25 7-31 181-208 (235)
303 3tvj_B Mannan-binding lectin s 78.1 1.3 4.6E-05 33.6 2.8 26 6-31 182-212 (242)
304 3mhw_U Urokinase-type plasmino 77.9 1.3 4.3E-05 33.9 2.6 25 7-31 192-219 (247)
305 1pyt_D TC, PCPA-TC, chymotryps 77.8 1.3 4.4E-05 34.3 2.6 26 7-32 194-222 (251)
306 1rtf_B (TC)-T-PA, two chain ti 76.8 1.2 4E-05 34.4 2.2 26 7-32 197-225 (252)
307 1ddj_A Plasminogen; catalytic 76.8 1.3 4.4E-05 34.3 2.4 26 7-32 191-219 (247)
308 3bg8_A Coagulation factor XIA 76.7 1.5 5E-05 33.6 2.7 26 7-32 182-210 (238)
309 1t8o_A Chymotrypsin A; chymotr 76.5 1.4 4.9E-05 34.0 2.6 26 7-32 189-217 (245)
310 2vnt_A Urokinase-type plasmino 75.8 3.8 0.00013 31.7 5.0 45 8-52 216-267 (276)
311 4f4o_C Haptoglobin; globin fol 73.8 2.1 7.2E-05 35.4 3.0 24 9-32 292-320 (347)
312 2wph_S Coagulation factor IXA 73.2 1.7 5.7E-05 33.2 2.2 26 7-32 179-207 (235)
313 1gpz_A Complement C1R componen 73.2 3.9 0.00013 33.8 4.6 45 7-51 342-393 (399)
314 2olg_A Pro-phenoloxidase activ 73.2 1.7 6E-05 34.0 2.3 24 8-31 223-250 (278)
315 1lvm_A Catalytic domain of the 72.3 7.2 0.00025 30.8 5.7 48 6-53 152-202 (229)
316 2ijd_1 Picornain 3C, RNA-direc 71.8 4.8 0.00016 36.2 5.1 39 2-42 136-174 (644)
317 3hrz_D Complement factor B; se 71.4 3.8 0.00013 36.6 4.4 49 7-55 668-733 (741)
318 1elv_A Complement C1S componen 70.6 8.4 0.00029 31.0 6.0 46 8-53 272-324 (333)
319 3nxp_A Prethrombin-1; alloster 68.4 4.5 0.00015 34.1 4.0 43 7-49 364-415 (424)
320 1md8_A C1R complement serine p 67.5 2.6 8.9E-05 34.3 2.3 26 7-32 274-304 (329)
321 3f1s_B Vitamin K-dependent pro 66.2 7.7 0.00026 30.5 4.8 45 9-53 225-275 (283)
322 1v84_A Galactosylgalactosylxyl 64.5 5.2 0.00018 32.1 3.4 33 14-46 147-185 (253)
323 2b9l_A Prophenoloxidase activa 64.0 6.3 0.00021 33.1 4.0 45 7-51 326-380 (394)
324 2xrc_A Human complement factor 61.2 8.4 0.00029 33.9 4.5 44 8-51 502-553 (565)
325 2odp_A Complement C2; C3/C5 co 60.6 3.4 0.00011 35.2 1.7 26 7-32 430-458 (509)
326 1rrk_A Complement factor B; BB 59.5 4 0.00014 34.5 2.0 26 7-32 426-454 (497)
327 3k6e_A CBS domain protein; str 59.0 5.6 0.00019 28.4 2.5 16 15-30 118-133 (156)
328 1zjk_A Mannan-binding lectin s 58.8 4.8 0.00017 33.4 2.4 25 7-31 344-373 (403)
329 4esy_A CBS domain containing m 58.7 6.4 0.00022 28.1 2.8 22 10-31 47-68 (170)
330 3lfr_A Putative metal ION tran 57.0 6.4 0.00022 27.0 2.5 20 12-31 100-119 (136)
331 3h5c_B Vitamin K-dependent pro 55.5 5.2 0.00018 32.0 2.0 23 8-30 265-290 (317)
332 2f83_A Coagulation factor XI; 54.5 5.9 0.0002 35.3 2.3 25 8-32 570-597 (625)
333 3cu0_A Galactosylgalactosylxyl 53.2 8.5 0.00029 31.3 2.8 31 15-46 174-210 (281)
334 3kpb_A Uncharacterized protein 52.4 8.9 0.0003 25.3 2.5 20 11-30 92-111 (122)
335 2d0j_A Galactosylgalactosylxyl 51.5 9.2 0.00032 30.5 2.8 30 15-45 142-177 (246)
336 2ef7_A Hypothetical protein ST 49.8 10 0.00034 25.5 2.5 20 11-30 97-116 (133)
337 3kxr_A Magnesium transporter, 49.5 9.6 0.00033 28.6 2.5 20 11-30 146-165 (205)
338 2o8m_A Protease; NS3, NS4A, vi 49.3 25 0.00085 27.1 4.8 39 9-48 146-189 (200)
339 3ctu_A CBS domain protein; str 49.3 10 0.00035 26.4 2.5 16 15-30 118-133 (156)
340 2hrv_A 2A cysteine proteinase; 48.2 25 0.00084 25.7 4.4 33 6-39 99-131 (142)
341 2rih_A Conserved protein with 48.0 11 0.00038 25.7 2.5 20 12-31 101-120 (141)
342 3sl7_A CBS domain-containing p 47.6 11 0.00038 26.6 2.5 21 10-30 127-147 (180)
343 3k6e_A CBS domain protein; str 46.5 14 0.00048 26.3 2.9 24 8-31 44-67 (156)
344 2emq_A Hypothetical conserved 45.2 13 0.00043 25.8 2.5 16 15-30 115-130 (157)
345 2xxl_A GRAM-positive specific 45.0 22 0.00075 29.8 4.3 44 8-51 313-370 (408)
346 1yav_A Hypothetical protein BS 43.6 14 0.00048 25.8 2.5 16 15-30 118-133 (159)
347 4dur_A Plasminogen, serine pro 43.5 8 0.00027 35.7 1.4 25 8-32 736-763 (791)
348 3fio_A A cystathionine beta-sy 41.0 16 0.00056 21.6 2.2 20 10-30 21-40 (70)
349 3k2v_A Putative D-arabinose 5- 39.8 18 0.0006 25.0 2.5 20 11-30 60-79 (149)
350 3lqn_A CBS domain protein; csg 39.0 21 0.00073 24.4 2.8 20 11-30 47-66 (150)
351 2uv4_A 5'-AMP-activated protei 38.0 23 0.00078 24.5 2.9 21 11-31 51-71 (152)
352 3ctu_A CBS domain protein; str 37.4 22 0.00075 24.6 2.7 22 9-30 45-66 (156)
353 1yav_A Hypothetical protein BS 36.8 24 0.00082 24.5 2.8 21 11-31 46-66 (159)
354 4fry_A Putative signal-transdu 36.4 19 0.00065 24.9 2.2 17 13-30 110-126 (157)
355 2o16_A Acetoin utilization pro 35.8 25 0.00086 24.6 2.8 20 11-30 35-54 (160)
356 2yvy_A MGTE, Mg2+ transporter 35.7 20 0.0007 27.9 2.5 20 11-30 229-248 (278)
357 2yzi_A Hypothetical protein PH 35.2 27 0.00091 23.4 2.8 20 11-30 37-56 (138)
358 3l2b_A Probable manganase-depe 34.8 22 0.00075 26.8 2.5 21 11-31 37-57 (245)
359 2p9m_A Hypothetical protein MJ 34.4 28 0.00097 23.2 2.8 20 11-30 38-57 (138)
360 2oux_A Magnesium transporter; 33.8 23 0.00077 27.9 2.5 18 13-30 233-250 (286)
361 4gqw_A CBS domain-containing p 33.7 29 0.001 23.4 2.8 22 10-31 36-57 (152)
362 1pvm_A Conserved hypothetical 33.6 24 0.00082 25.3 2.5 21 11-31 105-125 (184)
363 2nyc_A Nuclear protein SNF4; b 33.1 31 0.001 23.1 2.8 21 11-31 41-61 (144)
364 1koe_A Endostatin; angiogenesi 32.9 16 0.00055 27.6 1.3 22 5-26 52-74 (172)
365 1gyt_A Cytosol aminopeptidase; 32.7 32 0.0011 30.1 3.4 29 100-135 321-351 (503)
366 1hmj_A RPB5, protein (subunit 32.6 17 0.00059 23.9 1.3 18 103-126 39-57 (78)
367 3sl7_A CBS domain-containing p 32.0 31 0.0011 24.1 2.8 21 11-31 36-56 (180)
368 4dah_A Sporulation kinase D; a 32.0 67 0.0023 23.3 4.8 31 15-53 130-160 (217)
369 3nqr_A Magnesium and cobalt ef 32.0 32 0.0011 22.8 2.8 21 11-31 35-56 (127)
370 1lam_A Leucine aminopeptidase; 31.7 34 0.0012 29.9 3.4 28 101-135 302-331 (484)
371 2whx_A Serine protease/ntpase/ 31.6 25 0.00085 31.2 2.6 24 8-31 130-153 (618)
372 3fv6_A YQZB protein; CBS domai 31.1 33 0.0011 23.9 2.8 20 11-30 46-65 (159)
373 3fhm_A Uncharacterized protein 30.9 33 0.0011 24.0 2.8 20 11-30 57-76 (165)
374 1pbj_A Hypothetical protein; s 30.5 33 0.0011 22.4 2.6 19 11-30 31-49 (125)
375 1vr9_A CBS domain protein/ACT 30.1 30 0.001 25.8 2.5 20 11-30 102-121 (213)
376 3lv9_A Putative transporter; C 30.0 36 0.0012 23.2 2.8 21 10-30 54-75 (148)
377 1y5h_A Hypothetical protein RV 30.0 29 0.001 23.0 2.3 21 11-31 38-58 (133)
378 2j9l_A Chloride channel protei 29.9 36 0.0012 24.0 2.8 21 10-30 46-68 (185)
379 3pei_A Cytosol aminopeptidase; 29.6 39 0.0013 29.5 3.4 30 99-135 301-332 (486)
380 3h8g_F Cytosol aminopeptidase; 29.0 40 0.0014 29.5 3.4 29 100-135 318-348 (497)
381 3ij3_A Cytosol aminopeptidase; 28.8 42 0.0014 29.3 3.4 30 99-135 300-331 (482)
382 3jru_B Probable cytosol aminop 28.2 43 0.0015 29.3 3.4 28 101-135 314-343 (490)
383 3jtf_A Magnesium and cobalt ef 28.1 41 0.0014 22.4 2.8 22 10-31 36-58 (129)
384 3kzw_A Cytosol aminopeptidase; 27.7 45 0.0015 29.4 3.5 28 101-135 335-364 (515)
385 1eik_A RNA polymerase subunit 27.6 17 0.00058 23.8 0.6 20 101-126 39-59 (77)
386 3ghd_A A cystathionine beta-sy 27.4 37 0.0013 20.9 2.2 18 12-30 23-40 (70)
387 2hc9_A Leucine aminopeptidase 27.3 46 0.0016 29.1 3.5 29 100-135 303-333 (491)
388 3i8n_A Uncharacterized protein 26.8 35 0.0012 22.7 2.2 22 9-30 36-58 (130)
389 2wv9_A Flavivirin protease NS2 26.0 44 0.0015 30.1 3.2 28 5-32 181-208 (673)
390 4efd_A Aminopeptidase; structu 25.9 56 0.0019 28.8 3.7 29 100-135 341-371 (522)
391 2rc3_A CBS domain; in SITU pro 25.9 43 0.0015 22.3 2.5 19 11-30 39-57 (135)
392 3lhh_A CBS domain protein; str 25.3 53 0.0018 23.2 3.1 22 9-30 72-94 (172)
393 2qrd_G Protein C1556.08C; AMPK 24.2 42 0.0014 26.3 2.5 19 11-29 287-305 (334)
394 3kr4_A M17 leucyl aminopeptida 23.6 59 0.002 28.7 3.5 28 101-135 346-375 (528)
395 3t4n_C Nuclear protein SNF4; C 22.6 47 0.0016 25.8 2.5 21 11-31 220-240 (323)
396 2pfi_A Chloride channel protei 22.2 61 0.0021 22.1 2.8 22 10-31 42-65 (164)
397 2zy9_A Mg2+ transporter MGTE; 21.0 51 0.0017 28.1 2.5 18 13-30 251-268 (473)
398 1vr9_A CBS domain protein/ACT 20.9 64 0.0022 23.8 2.9 47 10-56 42-102 (213)
399 3ocm_A Putative membrane prote 20.6 64 0.0022 23.0 2.7 21 10-30 67-88 (173)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.97 E-value=1.3e-30 Score=232.62 Aligned_cols=139 Identities=26% Similarity=0.290 Sum_probs=119.3
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc----CCeEEEEehhhHHHHHHhhhhcCCcccee-ecceecEEEEEC-
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT----AGISFAIPIDYAIEFLTNYKRKDIDRTIT-HKKYIGITMLTL- 74 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~g~~~~~~-~~~~lGi~~~~l- 74 (169)
+|||||+||||||||||||.+|+||||+++..+ +|+|||||++.+++++++|+++| ++ .++|||++++++
T Consensus 188 ~IQtDAaInpGnSGGPLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G----~~~~r~~LGv~~~~~~ 263 (539)
T 4fln_A 188 GIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNG----KYTGYPCLGVLLQKLE 263 (539)
T ss_dssp EEEESSCCCTTTTTSEEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTT----SCCCCCBCCEEEEECC
T ss_pred EEEEEeEecCCCccchhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcC----eEEeeeecceEEEecC
Confidence 489999999999999999999999999998763 68999999999999999999988 55 499999999997
Q ss_pred CHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhh------------hhhhh
Q psy18070 75 NEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSK------------LVVWS 142 (169)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~------------~~~~~ 142 (169)
++++++.++++ ...|++|.+|.++|||+ ++ ||+||||+++++..+.+..+ ..+..
T Consensus 264 ~~~~~~~~~l~------~~~Gv~V~~V~~~spA~------~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~ 330 (539)
T 4fln_A 264 NPALRECLKVP------TNEGVLVRRVEPTSDAS------KV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQ 330 (539)
T ss_dssp CHHHHHHHTCS------SSBCEEEEEECTTSGGG------GT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHT
T ss_pred CHHHHHhcCCC------CcCceeeecccCCChHH------hC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHc
Confidence 88999999985 23799999999999999 76 99999999999888765433 23333
Q ss_pred cCCCCeeEEEEEEe
Q psy18070 143 INHPSITCHILLRL 156 (169)
Q Consensus 143 ~~~~~~~~~~i~r~ 156 (169)
......+.+.++|.
T Consensus 331 ~~~Gd~v~l~v~R~ 344 (539)
T 4fln_A 331 KFAGDIAEIGIIRA 344 (539)
T ss_dssp SCTTCEEEEEEEET
T ss_pred CCCCCEEEEEEEEC
Confidence 34455679999995
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.97 E-value=1.1e-30 Score=221.66 Aligned_cols=140 Identities=25% Similarity=0.298 Sum_probs=124.5
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLN 75 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~ 75 (169)
++|||+++|||||||||+|.+|+||||+++..+ .+++||||++.+++++++|++++ .+.++|||+++++++
T Consensus 175 ~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g----~v~~~~lGv~~~~~~ 250 (345)
T 3stj_A 175 FIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG----EIKRGLLGIKGTEMS 250 (345)
T ss_dssp EEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHS----SCCCEECCEEEEECC
T ss_pred EEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcc----cccccccceeeEeec
Confidence 489999999999999999999999999998864 47999999999999999999999 889999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhh--cCCCCeeEEEE
Q psy18070 76 EKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWS--INHPSITCHIL 153 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~--~~~~~~~~~~i 153 (169)
+++++.++++. ..|++|.+|.++|||+ +|||++||+|+++|+.++.+..++.... .+....+.+.+
T Consensus 251 ~~~a~~~gl~~------~~G~~V~~V~~~spA~------~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (345)
T 3stj_A 251 ADIAKAFNLDV------QRGAFVSEVLPGSGSA------KAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (345)
T ss_dssp HHHHHHTTCSC------CSSEEEEEECTTSHHH------HHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEE
T ss_pred HHHHHhcCCCC------CceEEEEEeccCChHH------HcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999852 4799999999999999 9999999999999998887766555433 33456779999
Q ss_pred EEe
Q psy18070 154 LRL 156 (169)
Q Consensus 154 ~r~ 156 (169)
+|+
T Consensus 319 ~R~ 321 (345)
T 3stj_A 319 LRN 321 (345)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.97 E-value=5.9e-30 Score=224.12 Aligned_cols=141 Identities=28% Similarity=0.334 Sum_probs=123.9
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLN 75 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~ 75 (169)
+||||+++|||||||||+|.+|+||||+++..+ .+++||||++.+++++++|++++ ++.++|||+++++++
T Consensus 193 ~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g----~v~r~~lGv~~~~~~ 268 (451)
T 3pv2_A 193 FIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFG----SIHRGLMGIFVQHLT 268 (451)
T ss_dssp CEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHS----SCCCCBCCEEEEECC
T ss_pred EEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcC----CcccccccceEEecc
Confidence 689999999999999999999999999998764 57999999999999999999999 899999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhh--hcCCCCeeEEEE
Q psy18070 76 EKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVW--SINHPSITCHIL 153 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~--~~~~~~~~~~~i 153 (169)
+++++.++++ ....|++|.+|.++|||+ ++||++||+|+++|+.++.+..++... .......+.+.+
T Consensus 269 ~~~a~~~gl~-----~~~~G~~V~~V~~~spA~------~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V 337 (451)
T 3pv2_A 269 PELAQAMGYP-----EDFQGALVSQVNPNSPAE------LAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIV 337 (451)
T ss_dssp HHHHHHTTSC-----TTCCCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEE
T ss_pred HHHHHhcCCC-----cCCceEEEEecCCCChHH------HcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 9999999985 333799999999999999 999999999999998887766555433 334456778999
Q ss_pred EEe
Q psy18070 154 LRL 156 (169)
Q Consensus 154 ~r~ 156 (169)
+|.
T Consensus 338 ~R~ 340 (451)
T 3pv2_A 338 ERD 340 (451)
T ss_dssp EET
T ss_pred EEC
Confidence 985
No 4
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=99.96 E-value=3e-29 Score=210.90 Aligned_cols=149 Identities=40% Similarity=0.545 Sum_probs=120.2
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeeccCCeEEEEehhhHHHHHHhhhhcCC--ccceeecceecEEEEECCHHH
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPIDYAIEFLTNYKRKDI--DRTITHKKYIGITMLTLNEKL 78 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~~~i~~~l~~l~~~g~--~~~~~~~~~lGi~~~~l~~~~ 78 (169)
+||+|++++||||||||+|.+|+||||+++...++++||||++.++++++++++.+. +.+.+.++|+|+.+.++++++
T Consensus 161 ~i~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~~~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~ 240 (325)
T 1lcy_A 161 YIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSI 240 (325)
T ss_dssp CEEESSCCSTTTTTSEEEETTSCEEEEEEEEEETTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHH
T ss_pred EEEEcCCCCCCCccccEECCCCEEEEEEeEeecCCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHH
Confidence 689999999999999999999999999999888899999999999999999876421 112678899999999999999
Q ss_pred HHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 79 IEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 79 ~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
+++++++....|+...|++|.+|.++|||+ ++||++||+|+++++.++.+..++..... ....+.+.+.|+
T Consensus 241 ~~~~~l~~~~~~~~~~gv~V~~V~~~spA~------~aGl~~GDvI~~ing~~v~~~~~l~~~l~-~~~~v~l~v~R~ 311 (325)
T 1lcy_A 241 LAELQLREPSFPDVQHGVLIHKVILGSPAH------RAGLRPGDVILAIGEQMVQNAEDVYEAVR-TQSQLAVQIRRG 311 (325)
T ss_dssp HHHHTTSCTTSCCCSSCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECCSHHHHHHHHT-TCSSEEEEEEET
T ss_pred HHhhCccccccccCCCCeEEEEeCcCChHH------HCCCCCCCEEEEECCEEcCCHHHHHHHHh-CCCeEEEEEEEC
Confidence 999998654444556899999999999999 99999999999999998877666554433 346678888885
No 5
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.96 E-value=1.7e-29 Score=220.10 Aligned_cols=140 Identities=24% Similarity=0.304 Sum_probs=123.4
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLN 75 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~ 75 (169)
+||||+++|||||||||+|.+|+||||+++..+ .+++||||++.+++++++|+++| ++.++|||+++++++
T Consensus 175 ~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g----~v~r~~lGv~~~~~~ 250 (436)
T 4a8c_A 175 FIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG----EIKRGLLGIKGTEMS 250 (436)
T ss_pred EEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhcc----ccccccCceEecccC
Confidence 589999999999999999999999999998865 47999999999999999999999 899999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhh--hcCCCCeeEEEE
Q psy18070 76 EKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVW--SINHPSITCHIL 153 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~--~~~~~~~~~~~i 153 (169)
+++++.++++. ..|++|.+|.++|||+ ++||++||+|+++|+..+.+..++... .......+.+.+
T Consensus 251 ~~~a~~~gl~~------~~G~~V~~V~~~spA~------~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (436)
T 4a8c_A 251 ADIAKAFNLDV------QRGAFVSEVLPGSGSA------KAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (436)
T ss_pred HHHHHHhCCCC------CcceEEEEECCCChHH------HCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 99999999852 4799999999999999 999999999999998887766554433 233456778888
Q ss_pred EEe
Q psy18070 154 LRL 156 (169)
Q Consensus 154 ~r~ 156 (169)
+|.
T Consensus 319 ~R~ 321 (436)
T 4a8c_A 319 LRN 321 (436)
T ss_pred EEC
Confidence 885
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.96 E-value=7.9e-29 Score=207.46 Aligned_cols=140 Identities=26% Similarity=0.342 Sum_probs=121.8
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--------CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEE
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--------AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITML 72 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--------~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~ 72 (169)
++|+|++++||||||||+|.+|+||||++.... .+++||||++.+++++++|++++ ++.++|||+.++
T Consensus 153 ~i~~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g----~~~~~~lGi~~~ 228 (318)
T 1te0_A 153 FLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG----RVIRGYIGIGGR 228 (318)
T ss_dssp SEEESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHS----SCCCEECCEEEE
T ss_pred EEEECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcC----CcccccceeEee
Confidence 689999999999999999999999999998753 47899999999999999999998 788999999999
Q ss_pred ECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc--CCCCeeE
Q psy18070 73 TLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI--NHPSITC 150 (169)
Q Consensus 73 ~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~--~~~~~~~ 150 (169)
++++++++.++++ ...|++|.+|.++|||+ ++||++||+|+++|+.++.+..++..... .....+.
T Consensus 229 ~~~~~~~~~~g~~------~~~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~ 296 (318)
T 1te0_A 229 EIAPLHAQGGGID------QLQGIVVNEVSPDGPAA------NAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIP 296 (318)
T ss_dssp ECSCCCSSSSCSS------SCCCEEEEEECTTSTTT------TTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEE
T ss_pred ecchhHHHhccCC------CCCcEEEEEeCCCChHH------HCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEE
Confidence 9998888887763 33799999999999999 99999999999999988877655543333 3455779
Q ss_pred EEEEEe
Q psy18070 151 HILLRL 156 (169)
Q Consensus 151 ~~i~r~ 156 (169)
+.++|.
T Consensus 297 l~v~R~ 302 (318)
T 1te0_A 297 VVVMRD 302 (318)
T ss_dssp EEEESS
T ss_pred EEEEEC
Confidence 999885
No 7
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.96 E-value=4.4e-29 Score=218.41 Aligned_cols=140 Identities=29% Similarity=0.330 Sum_probs=122.5
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLN 75 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~ 75 (169)
+|||||++|||||||||+|.+|+||||+++..+ .+++||||++.+++++++|+++| ++.++|||+++++++
T Consensus 198 ~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g----~v~~~~LGv~~~~~~ 273 (448)
T 1ky9_A 198 FIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYG----QVKRGELGIMGTELN 273 (448)
T ss_dssp CEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHHHHHHHHHHS----SCCBCCCCCSCCCTT
T ss_pred EEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchhhHHHHhhhc----ccceecccccccccc
Confidence 689999999999999999999999999998764 47999999999999999999999 889999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc--CCCCeeEEEE
Q psy18070 76 EKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI--NHPSITCHIL 153 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~--~~~~~~~~~i 153 (169)
+++++.++++ ...|++|.+|.++|||+ ++||++||+|+++++..+.+..++..... +....+.+.+
T Consensus 274 ~~~a~~lgl~------~~~G~~V~~V~~gspA~------~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v 341 (448)
T 1ky9_A 274 SELAKAMKVD------AQRGAFVSQVLPNSSAA------KAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGL 341 (448)
T ss_dssp SHHHHTSCCT------TCCSEECCCCTTCSSST------TTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEE
T ss_pred HHHHHHhCCC------CCCceEEEEeccCCHHH------HcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 9999999884 23799999999999999 99999999999998888776655543333 3345668888
Q ss_pred EEe
Q psy18070 154 LRL 156 (169)
Q Consensus 154 ~r~ 156 (169)
+|.
T Consensus 342 ~R~ 344 (448)
T 1ky9_A 342 LRD 344 (448)
T ss_dssp ESS
T ss_pred EEC
Confidence 885
No 8
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=99.95 E-value=2.1e-28 Score=205.99 Aligned_cols=149 Identities=37% Similarity=0.545 Sum_probs=51.2
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeeccCCeEEEEehhhHHHHHHhhhhcCC-ccceeecceecEEEEECCHHHH
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPIDYAIEFLTNYKRKDI-DRTITHKKYIGITMLTLNEKLI 79 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~~~i~~~l~~l~~~g~-~~~~~~~~~lGi~~~~l~~~~~ 79 (169)
++|+|++++||||||||+|.+|+||||++....++++||||++.++++++++.+... +.+.+.++|||+.+.+++++.+
T Consensus 160 ~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~ 239 (332)
T 3num_A 160 YIQTDAIINYGNAGGPLVNLDGEVIGINTLKVTAGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKA 239 (332)
T ss_dssp CEEESSCCCTTTTTSEEEETTSCEEEEEEEEEETTEEEEEEHHHHHHHHHHHCC--------------------------
T ss_pred EEEEECCcCCCCcHHHhhCCCCcEEEEEeeEecccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHh
Confidence 589999999999999999999999999999988999999999999999999863210 0124678999999999998888
Q ss_pred HHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 80 EQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 80 ~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
++++......+....|++|.+|.++|||+ ++||++||+|+++++.++.+..++... +.....+.+.+.|.
T Consensus 240 ~~~~~~~~~~~~~~~g~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~-l~~~~~v~l~v~R~ 309 (332)
T 3num_A 240 KELKDRHRDFPDVISGAYIIEVIPDTPAE------AGGLKENDVIISINGQSVVSANDVSDV-IKRESTLNMVVRRG 309 (332)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred hhhhhhccccCCCCCceEEEEeccCCChH------HcCCCCCCEEEEECCEECCCHHHHHHH-HhCCCeEEEEEEEC
Confidence 87765433334455799999999999999 999999999999888877554444332 23345567888875
No 9
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.94 E-value=2.7e-27 Score=200.63 Aligned_cols=135 Identities=26% Similarity=0.312 Sum_probs=113.4
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLN 75 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~ 75 (169)
++|+|++++||||||||+|.+|+||||+++... ++++||||++.++++++++++++ ++.++|||+++.+..
T Consensus 168 ~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g----~~~~~~lGi~~~~~~ 243 (348)
T 3qo6_A 168 VIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFG----KVTRPILGIKFAPDQ 243 (348)
T ss_dssp EEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHS----SCCCEECCCEECCTT
T ss_pred EEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCC----ceeeeecCcEEccch
Confidence 489999999999999999999999999998863 57999999999999999999999 889999999997532
Q ss_pred HHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCC-----------CcEEEecCceeecchhhhhhhh--
Q psy18070 76 EKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKP-----------TSSRLLGECLAQYTTSKLVVWS-- 142 (169)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~-----------GDvI~~~~~v~~~~~~~~~~~~-- 142 (169)
..++++. .|++|.+|.++|||+ +|||++ ||+|+++|+.++.+..++....
T Consensus 244 --~~~~~~~---------~Gv~V~~V~~~spA~------~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~ 306 (348)
T 3qo6_A 244 --SVEQLGV---------SGVLVLDAPPSGPAG------KAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQ 306 (348)
T ss_dssp --TTTTTTC---------SSEEEEECCSSSHHH------HHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTT
T ss_pred --hhhhcCC---------ceEEEEEecCCChHH------HcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHh
Confidence 2233332 699999999999999 999999 9999998888777665554433
Q ss_pred cCCCCeeEEEEEEe
Q psy18070 143 INHPSITCHILLRL 156 (169)
Q Consensus 143 ~~~~~~~~~~i~r~ 156 (169)
.+....+.+.++|.
T Consensus 307 ~~~g~~v~l~v~R~ 320 (348)
T 3qo6_A 307 CKVGDEVTVEVLRG 320 (348)
T ss_dssp CCTTCEEEEEEECS
T ss_pred CCCcCEEEEEEEEC
Confidence 23345679999985
No 10
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.94 E-value=4.7e-26 Score=190.78 Aligned_cols=129 Identities=23% Similarity=0.270 Sum_probs=110.7
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc------------CCeEEEEehhhHHHHHHhhhhcCCccceeecceec
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT------------AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIG 68 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~------------~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lG 68 (169)
+||+|+++++|||||||+|.+|+||||+++... ++++||||++.+++++++|+++| ++.++|||
T Consensus 157 ~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g----~~~~~~lG 232 (324)
T 1y8t_A 157 AIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG----KASHASLG 232 (324)
T ss_dssp EEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHS----CCCCEECC
T ss_pred EEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcC----Cccccccc
Confidence 589999999999999999999999999998653 36899999999999999999998 78899999
Q ss_pred EEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc--CCC
Q psy18070 69 ITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI--NHP 146 (169)
Q Consensus 69 i~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~--~~~ 146 (169)
+.+...+ ...|++|.+|.++|||+ ++|||+||+|+++++.++.+..++..... ...
T Consensus 233 i~~~~~~----------------~~~g~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g 290 (324)
T 1y8t_A 233 VQVTNDK----------------DTLGAKIVEVVAGGAAA------NAGVPKGVVVTKVDDRPINSADALVAAVRSKAPG 290 (324)
T ss_dssp EEEESCS----------------SSSSEEEEEECTTSTTT------TTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTT
T ss_pred eEeeecc----------------CCCceEEEEECCCChHH------HcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCC
Confidence 9997531 13799999999999999 99999999999999988877655543332 335
Q ss_pred CeeEEEEEE
Q psy18070 147 SITCHILLR 155 (169)
Q Consensus 147 ~~~~~~i~r 155 (169)
..+.+.++|
T Consensus 291 ~~v~l~v~R 299 (324)
T 1y8t_A 291 ATVALTFQD 299 (324)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEEEEE
Confidence 567899988
No 11
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.74 E-value=9.5e-19 Score=129.83 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=89.7
Q ss_pred CCeEEEEehhhHHHHHHhhhhcCCccceeecceecEEEEECCH---HHHHHhhcccCCCCCCCCcEEEEEEccCCccccc
Q psy18070 34 AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLNE---KLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFI 110 (169)
Q Consensus 34 ~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~~---~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~ 110 (169)
+|+|||||++.+++++++|+++| ++.++|||+.++++++ ++++.++++. ....|++|.+|.++|||+
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G----~v~r~~LGv~~~~~~~~~~~~~~~lgl~~----~~~~g~~V~~V~~~spA~-- 71 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNG----KVTRPALGIQMVNLSNVSTSDIRRLNIPS----NVTSGVIVRSVQSNMPAN-- 71 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCC----CSSCCCCCCEEEESSSSCHHHHHHHSSCS----SSCSCEEEEECSTTSGGG--
T ss_pred CcEEEEeEHHHHHHHHHHHHHcC----CEeeeEeeEEEEECCchhHHHHHHcCCCc----CCCCCEEEEEECCCCchH--
Confidence 68999999999999999999999 8899999999999875 7888888741 134799999999999998
Q ss_pred ccccccCCCCCcEEEecCceeecchhhhhhh--hcCCCCeeEEEEEEe
Q psy18070 111 KFRTSAGIKPTSSRLLGECLAQYTTSKLVVW--SINHPSITCHILLRL 156 (169)
Q Consensus 111 ~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~--~~~~~~~~~~~i~r~ 156 (169)
+||++||+|+++|+.++.+..++... ..+....+.+.+.|+
T Consensus 72 -----aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 72 -----GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp -----TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEET
T ss_pred -----HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 89999999999999888776554433 222355678889885
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.70 E-value=1.1e-17 Score=135.15 Aligned_cols=65 Identities=42% Similarity=0.726 Sum_probs=50.9
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc----CCeEEEEehhhHHHHHHhhhhcCCccceeecceecE
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKYIGI 69 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~lGi 69 (169)
+||||++++||||||||+|.+|+||||+++... .+++||||++.+++++++|+++| ++.|+|||+
T Consensus 171 ~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g----~v~r~~lGv 239 (239)
T 1l1j_A 171 LIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQK----KVEKAYLGV 239 (239)
T ss_dssp EEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC---------------
T ss_pred EEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCC----CCccceeCc
Confidence 589999999999999999999999999998764 47999999999999999999999 889999996
No 13
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.60 E-value=6e-16 Score=125.54 Aligned_cols=62 Identities=35% Similarity=0.513 Sum_probs=54.0
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcCCccceeecce
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKY 66 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~ 66 (169)
++|+|++++||||||||+|.+|+||||+++..+ .+++||||++.+++++++|+++| +..++|
T Consensus 175 ~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g----~~~~~~ 241 (245)
T 3sti_A 175 FIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFG----EILEHH 241 (245)
T ss_dssp CEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHH----HHC---
T ss_pred EEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcC----CCCCcc
Confidence 589999999999999999999999999998764 57999999999999999999998 555554
No 14
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.53 E-value=1e-14 Score=116.98 Aligned_cols=62 Identities=35% Similarity=0.581 Sum_probs=54.3
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--------CCeEEEEehhhHHHHHHhhhhcCCccceeecce
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--------AGISFAIPIDYAIEFLTNYKRKDIDRTITHKKY 66 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--------~~~~faiP~~~i~~~l~~l~~~g~~~~~~~~~~ 66 (169)
++|+|++++||||||||+|.+|+||||+++.+. ++++||||++.+++++++|+++| +..++|
T Consensus 164 ~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g----~~~~~~ 233 (237)
T 3lgi_A 164 FLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG----RVIRHH 233 (237)
T ss_dssp CEEECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHS----SCCC--
T ss_pred EEEEcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcC----CCCCch
Confidence 589999999999999999999999999998653 46899999999999999999999 555544
No 15
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.51 E-value=7.7e-14 Score=99.68 Aligned_cols=89 Identities=27% Similarity=0.320 Sum_probs=70.0
Q ss_pred eeecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhh
Q psy18070 61 ITHKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVV 140 (169)
Q Consensus 61 ~~~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~ 140 (169)
++.|+|||+++.+++++++++++++...++....|++|.+|.++|||+ ++||++||+|+++|+.++.+..++..
T Consensus 2 ~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~ 75 (113)
T 2pzd_A 2 SHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAH------RAGLRPGDVILAIGEQMVQNAEDVYE 75 (113)
T ss_dssp ---CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHH------HHTCCTTCEEEEETTEECCSHHHHHH
T ss_pred cccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCHHHHHH
Confidence 678999999999999999999998543334456899999999999999 99999999999999988876655443
Q ss_pred hhcCCCCeeEEEEEEe
Q psy18070 141 WSINHPSITCHILLRL 156 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r~ 156 (169)
.... ...+.+.+.|+
T Consensus 76 ~l~~-~~~v~l~v~R~ 90 (113)
T 2pzd_A 76 AVRT-QSQLAVQIRRG 90 (113)
T ss_dssp HHHH-CSSEEEEEEET
T ss_pred HHhC-CCeEEEEEEEC
Confidence 3222 45668888874
No 16
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.47 E-value=1.8e-13 Score=97.62 Aligned_cols=89 Identities=21% Similarity=0.196 Sum_probs=71.4
Q ss_pred eeecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhh
Q psy18070 61 ITHKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVV 140 (169)
Q Consensus 61 ~~~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~ 140 (169)
++.++|+|+++++++++++++++++....+....|++|.+|.++|||+ ++||++||+|+++|+.++.+..++..
T Consensus 2 ~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~ 75 (112)
T 2p3w_A 2 SHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQ------RGGIQDGDIIVKVNGRPLVDSSELQE 75 (112)
T ss_dssp CCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECCSHHHHHH
T ss_pred CcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHH------HCCCCCCCEEEEECCEECCCHHHHHH
Confidence 678999999999999999999998643334445899999999999999 99999999999999988877655543
Q ss_pred hhcCCCCeeEEEEEEe
Q psy18070 141 WSINHPSITCHILLRL 156 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r~ 156 (169)
.. .....+.+.+.|.
T Consensus 76 ~l-~~g~~v~l~v~R~ 90 (112)
T 2p3w_A 76 AV-LTESPLLLEVRRG 90 (112)
T ss_dssp HH-HHCSSEEEEEEET
T ss_pred HH-hCCCeEEEEEEEC
Confidence 33 3345667888874
No 17
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.31 E-value=1.9e-12 Score=103.41 Aligned_cols=56 Identities=25% Similarity=0.388 Sum_probs=50.8
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--~~~~faiP~~~i~~~l~~l~~~g 56 (169)
++|+|+.+++|||||||+|.+|+||||+++... ++++||||++.++++++++....
T Consensus 171 ~~~~~~~~~~GdSGGPLv~~~G~vvGI~s~~~~~~~~~~~aip~~~v~~~l~~~~~~~ 228 (237)
T 3k6y_A 171 VYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQ 228 (237)
T ss_dssp EEEEESCCCTTCTTCEEECTTSCEEEEEEEECSSSTTEEEEEEHHHHHGGGGGTTCCS
T ss_pred EEEecCccCCCccHHHEECCCCEEEEEEEeeccCCCcEEEEEEHHHHHHHHHHccCCC
Confidence 478999999999999999999999999998764 57999999999999999996555
No 18
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=1.2e-10 Score=81.38 Aligned_cols=82 Identities=16% Similarity=0.169 Sum_probs=54.4
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLV 139 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~ 139 (169)
.++++|+++...++...+.++. ....|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..++.
T Consensus 14 ~~~~lG~~~~~~~~~~~~~~~~------~~~~g~~V~~V~~~spA~------~aG~l~~GD~I~~ing~~v~~~~~~~~~ 81 (103)
T 2fcf_A 14 PSKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAG------KNGTLKPGDRIVEVDGMDLRDASHEQAV 81 (103)
T ss_dssp C-CCCCEEEECCCC-------------------EEEEEECSSSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCceeEEEEccCCCCcccccC------CCCCCEEEEEeCCCCcHH------HcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4578999998877655554433 223699999999999999 999 99999999999998876 44444
Q ss_pred hhhcCCCCeeEEEEEEe
Q psy18070 140 VWSINHPSITCHILLRL 156 (169)
Q Consensus 140 ~~~~~~~~~~~~~i~r~ 156 (169)
......+..+.+.+.|.
T Consensus 82 ~~l~~~~~~v~l~v~r~ 98 (103)
T 2fcf_A 82 EAIRKAGNPVVFMVQSI 98 (103)
T ss_dssp HHHHTCCSSEEEEEECC
T ss_pred HHHHhCCCcEEEEEEEC
Confidence 33334455667777663
No 19
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.06 E-value=3.3e-10 Score=82.40 Aligned_cols=82 Identities=16% Similarity=0.169 Sum_probs=56.3
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLV 139 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~ 139 (169)
.++++|+++...++...+.++. ....|++|.+|.++|||+ ++| |++||+|+++|+.++.+ ..+..
T Consensus 34 ~~~~lGi~v~~~~~~~~~~~~~------~~~~gv~V~~V~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 101 (123)
T 2iwq_A 34 PSKSLGISIVGGRGMGSRLSNG------EVMRGIFIKHVLEDSPAG------KNGTLKPGDRIVEVDGMDLRDASHEQAV 101 (123)
T ss_dssp TTSCCSEEEEECC---------------CCCCSEEEEEECSSSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCCccEEEEeccCcccccccc------CCCCCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4578999999887766554433 234699999999999999 999 99999999999998866 44444
Q ss_pred hhhcCCCCeeEEEEEEe
Q psy18070 140 VWSINHPSITCHILLRL 156 (169)
Q Consensus 140 ~~~~~~~~~~~~~i~r~ 156 (169)
......+..+.+.+.|.
T Consensus 102 ~~l~~~~~~v~l~v~r~ 118 (123)
T 2iwq_A 102 EAIRKAGNPVVFMVQSI 118 (123)
T ss_dssp HHHHHCCSSEEEEEECC
T ss_pred HHHHcCCCeEEEEEEEC
Confidence 33333345667777663
No 20
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.01 E-value=1.3e-10 Score=77.32 Aligned_cols=77 Identities=10% Similarity=0.006 Sum_probs=57.1
Q ss_pred cEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcC
Q psy18070 68 GITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSIN 144 (169)
Q Consensus 68 Gi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~ 144 (169)
|+++..++++..+.+++.. ..|++|.+|.++|||+ ++| |++||+|+++|+.++. +..+.......
T Consensus 1 G~~~~~~~~~~~~~~g~~~------~~gv~V~~v~~~s~A~------~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLVKSRKNEEYGLRL------ASHIFVKEISQDSLAA------RDGNIQEGDVVLKINGTVTENMSLTDAKTLIER 68 (81)
T ss_dssp CEEEEEECCSTTCCCCEEE------EEEEEEEEECTTSHHH------HHSSCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CeEEEEEECCCCCCCCEEE------eCCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHC
Confidence 6677777777777776631 1689999999999999 999 9999999999998877 55555433333
Q ss_pred CCCeeEEEEEEe
Q psy18070 145 HPSITCHILLRL 156 (169)
Q Consensus 145 ~~~~~~~~i~r~ 156 (169)
....+.+.+.|.
T Consensus 69 ~~~~v~l~v~R~ 80 (81)
T 2rcz_A 69 SKGKLKMVVQRD 80 (81)
T ss_dssp STTEEEEEEEC-
T ss_pred CCCeEEEEEEeC
Confidence 444667777663
No 21
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.98 E-value=3.9e-10 Score=83.74 Aligned_cols=84 Identities=12% Similarity=0.106 Sum_probs=59.3
Q ss_pred eeecceecEEEEEC---CHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--h
Q psy18070 61 ITHKKYIGITMLTL---NEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--T 135 (169)
Q Consensus 61 ~~~~~~lGi~~~~l---~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~ 135 (169)
...++++|+++... ++.. +.++.. +...|++|.+|.++|||+ ++||++||+|+++|+..+.+ .
T Consensus 34 ~~~~~~lG~~i~~g~~~~~~~-~~~~~~-----~~~~gv~V~~V~~~spA~------~aGL~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 34 QGENLILGFSIGGGIDQDPSQ-NPFSED-----KTDKGIYVTRVSEGGPAE------IAGLQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp ETTEEECSEEEEECTTSCGGG-CSSCSS-----TTCCCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCH
T ss_pred CCCcccccEEEEccccCChhh-hhhccc-----CCCCCEEEEEECCCCHHH------HCCCCCCCEEEEECCEEcCCCCH
Confidence 66788999998652 2221 122211 234799999999999999 99999999999999998874 3
Q ss_pred hhhhhhhcCC-CCeeEEEEEEe
Q psy18070 136 SKLVVWSINH-PSITCHILLRL 156 (169)
Q Consensus 136 ~~~~~~~~~~-~~~~~~~i~r~ 156 (169)
.++....... ...+.+.+.|.
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~ 123 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQ 123 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEEEEEC
Confidence 3333332233 35678888885
No 22
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=1.4e-09 Score=75.82 Aligned_cols=73 Identities=18% Similarity=0.095 Sum_probs=55.9
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch-hhhhhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT-SKLVVW 141 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~-~~~~~~ 141 (169)
..+++|+++...++ ...|++|.+|.++|||+ ++||++||+|+++|+.++.+. .+..+.
T Consensus 20 ~~~~lG~~~~~~~~---------------~~~gv~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~ 78 (100)
T 2eeh_A 20 PAGRLGFSVRGGSE---------------HGLGIFVSKVEEGSSAE------RAGLCVGDKITEVNGLSLESTTMGSAVK 78 (100)
T ss_dssp SSSSCSEEEECCTT---------------TTCCEEEEEECTTSHHH------HHTCCSSCEEEEETTEECSSCCHHHHHH
T ss_pred CCCCccEEEEcccc---------------CCCCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 44789999987531 12699999999999999 999999999999999887664 233333
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.++....+.+.+.|.
T Consensus 79 ~~~~~~~v~l~v~R~ 93 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRM 93 (100)
T ss_dssp HHHSCSSEEEEEEEC
T ss_pred hhcCCCEEEEEEEEC
Confidence 344466778888875
No 23
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=1.9e-10 Score=82.46 Aligned_cols=89 Identities=11% Similarity=0.007 Sum_probs=62.4
Q ss_pred hhhcCCccceeeccee----cEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEec
Q psy18070 52 YKRKDIDRTITHKKYI----GITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLG 127 (169)
Q Consensus 52 l~~~g~~~~~~~~~~l----Gi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~ 127 (169)
+++++ ++.++|+ |+.+...+. .+++.-. .....|++|.+|.++|||+ ++||++||+|+++
T Consensus 6 ~~~~g----~v~r~~l~~~~~v~l~~~~~----~lG~~~~--~~~~~gv~V~~V~~~spA~------~aGL~~GD~Il~v 69 (117)
T 1uit_A 6 SGGER----RKDRPYVEEPRHVKVQKGSE----PLGISIV--SGEKGGIYVSKVTVGSIAH------QAGLEYGDQLLEF 69 (117)
T ss_dssp CCCCC----CSCCCCSCCCEEEEEECSSC----CCCEEEE--ECTTSCEEEEEECTTSHHH------HHTCCTTCEECEE
T ss_pred ccccC----ccccccCCCCEEEEEEeCCC----CccEEEE--ccCCCCEEEEEECCCCHHH------HcCCCCCCEEEEE
Confidence 44556 7899999 999876542 2232110 0123699999999999999 9999999999999
Q ss_pred Cceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 128 ECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 128 ~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
|+..+.+. .+...........+.+.+.|.
T Consensus 70 ng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~ 100 (117)
T 1uit_A 70 NGINLRSATEQQARLIIGQQCDTITILAQYN 100 (117)
T ss_dssp TTEETTTCCHHHHHHHTTSCCSEEEEEECCC
T ss_pred CCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 99887654 333333334455668888775
No 24
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=98.95 E-value=8.4e-10 Score=86.41 Aligned_cols=56 Identities=20% Similarity=0.217 Sum_probs=49.5
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc----CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT----AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~g 56 (169)
++++|+.+.+|+|||||+|.+|+||||++.... ++.+|++|++.++++++...++-
T Consensus 146 ~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~~~ 205 (210)
T 2as9_A 146 ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQH 205 (210)
T ss_dssp EEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCCCS
T ss_pred eEEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhhhh
Confidence 478999999999999999999999999998764 46789999999999999877654
No 25
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.92 E-value=1.4e-09 Score=75.98 Aligned_cols=83 Identities=11% Similarity=0.124 Sum_probs=55.4
Q ss_pred ecceecEEEE-ECCHHHHH-HhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchh--hh
Q psy18070 63 HKKYIGITML-TLNEKLIE-QLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTS--KL 138 (169)
Q Consensus 63 ~~~~lGi~~~-~l~~~~~~-~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~--~~ 138 (169)
.++++|+++. ..+.+..+ .+.. .....|++|.+|.++|||+ ++||++||+|+++|+..+.+.. +.
T Consensus 17 ~~~~lG~~i~g~~~~~~~~~~~~~-----~~~~~gv~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 17 ENLILGFSIGGGIDQDPSQNPFSE-----DKTDKGIYVTRVSEGGPAE------IAGLQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp TEEECSEEEEECTTSCGGGCSSCS-----STTCCSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCCcccEEEECccccCcccccccc-----CCCCCCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHH
Confidence 4568999998 33221111 1110 1234799999999999999 9999999999999998875532 33
Q ss_pred hhhhcC-CCCeeEEEEEEe
Q psy18070 139 VVWSIN-HPSITCHILLRL 156 (169)
Q Consensus 139 ~~~~~~-~~~~~~~~i~r~ 156 (169)
...... ....+.+.+.|+
T Consensus 86 ~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEEcC
Confidence 322222 345668888774
No 26
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=73.97 Aligned_cols=70 Identities=11% Similarity=-0.014 Sum_probs=51.6
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceee--cchhhhhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQ--YTTSKLVV 140 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~--~~~~~~~~ 140 (169)
.++++|+++..- ..|++|.+|.++|||+ ++||++||+|+++|+.++ .+..++..
T Consensus 15 ~~~~lG~~~~~~------------------~~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~ 70 (90)
T 2eaq_A 15 KSLDFGFTIKWD------------------IPGIFVASVEAGSPAE------FSQLQVDDEIIAINNTKFSYNDSKEWEE 70 (90)
T ss_dssp CSSCCSEEEEEE------------------TTEEEEEEECTTSHHH------HTTCCTTCEEEEETTEECCTTCHHHHHH
T ss_pred CCCcccEEEEec------------------CCCEEEEEECCCChHH------HcCCCCCCEEEEECCEEccCCCHHHHHH
Confidence 345789888631 1599999999999999 999999999999999888 44444332
Q ss_pred hhc--CCCCeeEEEEEEe
Q psy18070 141 WSI--NHPSITCHILLRL 156 (169)
Q Consensus 141 ~~~--~~~~~~~~~i~r~ 156 (169)
... .....+.+.+.|.
T Consensus 71 ~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 71 AMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp HHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCEEEEEEEeC
Confidence 222 2345667777774
No 27
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.87 E-value=8e-09 Score=71.10 Aligned_cols=79 Identities=18% Similarity=0.073 Sum_probs=56.2
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhh--hhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSK--LVV 140 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~--~~~ 140 (169)
...++|+++..-... ........|++|.+|.++|||+ ++||++||+|+++|+.++.+..+ ...
T Consensus 12 ~~~glG~~i~~g~~~---------~~~~~~~~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~ 76 (97)
T 2w4f_A 12 QTGGLGISIAGGKGS---------TPYKGDDEGIFISRVSEEGPAA------RAGVRVGDKLLEVNGVALQGAEHHEAVE 76 (97)
T ss_dssp BTTBSSEEEEECTTS---------CCSBTTBCSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCceeEEEECCccC---------CcccCCCCCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCcCHHHHHH
Confidence 357899998753211 0000234799999999999999 99999999999999988776433 333
Q ss_pred hhcCCCCeeEEEEEEe
Q psy18070 141 WSINHPSITCHILLRL 156 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r~ 156 (169)
........+.+.+.|.
T Consensus 77 ~~~~~g~~v~l~v~R~ 92 (97)
T 2w4f_A 77 ALRGAGTAVQMRVWRE 92 (97)
T ss_dssp HHHTSCSEEEEEEECC
T ss_pred HHhCCCCeEEEEEEeC
Confidence 3334566778888874
No 28
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.82 E-value=2e-09 Score=73.34 Aligned_cols=57 Identities=11% Similarity=-0.020 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 23 ~gv~V~~v~~~s~A~------~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 82 (92)
T 3cyy_A 23 SHIFVKEISQDSLAA------RDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 82 (92)
T ss_dssp EEEEEEEECTTCHHH------HSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC-
T ss_pred CCEEEEEECCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeC
Confidence 589999999999999 999 9999999999998877 55555433333445667888774
No 29
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.82 E-value=1.4e-08 Score=69.16 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=45.2
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 28 ~gv~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 86 (90)
T 2he4_A 28 PGQYIRSVDPGSPAA------RSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGP 86 (90)
T ss_dssp SSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECC
T ss_pred CCEEEEEECCCChHH------HCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcc
Confidence 699999999999999 999999999999999887765 444433333456667777764
No 30
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.81 E-value=9.7e-09 Score=70.59 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=52.4
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~ 141 (169)
..+|+++.... ...|++|.+|.++|||+ ++| |++||+|+++|+.++.+. .+....
T Consensus 16 ~~lG~~~~~~~----------------~~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 73 (95)
T 2vwr_A 16 EQLGIKLVRRT----------------DEPGVFILDLLEGGLAA------QDGRLSSNDRVLAINGHDLKYGTPELAAQI 73 (95)
T ss_dssp CCCCEEEEECS----------------SSCSEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CcccEEEEecc----------------CCCCEEEEEeCCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34788887542 12699999999999999 999 999999999999887553 333333
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.......+.+.+.|.
T Consensus 74 ~~~~g~~v~l~v~R~ 88 (95)
T 2vwr_A 74 IQASGERVNLTIARP 88 (95)
T ss_dssp HHHCCSEEEEEEEEE
T ss_pred HHcCCCEEEEEEEcC
Confidence 333456678888875
No 31
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=6.9e-09 Score=75.13 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=57.2
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecchhhhhhhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTTSKLVVWS 142 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~~~~~~~~ 142 (169)
..++|+++..+++. ....|++|.+|.++|||+ ++| |++||+|+++++..+.+..++....
T Consensus 31 ~~~lG~~~~~~~~~-------------~~~~gv~V~~V~~~spA~------~aG~l~~GD~I~~ing~~v~~~~~~~~~l 91 (124)
T 1wh1_A 31 QDKLGLTVCYRTDD-------------EDDIGIYISEIDPNSIAA------KDGRIREGDRIIQINGIEVQNREEAVALL 91 (124)
T ss_dssp TCCCCEEEECCCCC-------------SSCCCEEEEEECSSSHHH------HTCCCCTTCEEEEESSCBCCSHHHHHHHH
T ss_pred CCcccEEEEecCCC-------------CCCCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 45799999877543 112699999999999999 999 9999999999988877655544333
Q ss_pred cCC-CCeeEEEEEEeeE
Q psy18070 143 INH-PSITCHILLRLYL 158 (169)
Q Consensus 143 ~~~-~~~~~~~i~r~~~ 158 (169)
... ...+.+.+.|.-.
T Consensus 92 ~~~~g~~v~l~v~R~g~ 108 (124)
T 1wh1_A 92 TSEENKNFSLLIARPEL 108 (124)
T ss_dssp TCSSCCSCCEEEEECSS
T ss_pred HhCCCCEEEEEEEECCE
Confidence 333 4566888888643
No 32
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=1.1e-08 Score=70.27 Aligned_cols=71 Identities=11% Similarity=-0.024 Sum_probs=54.1
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee-cchhhhhh
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ-YTTSKLVV 140 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~-~~~~~~~~ 140 (169)
...++|+++..- ..|++|.+|.++|||+ ++| |++||+|+++|+..+ .+..++..
T Consensus 16 ~~~~lG~~i~~~------------------~~~v~V~~V~~~spA~------~ag~L~~GD~I~~ing~~v~~~~~~~~~ 71 (91)
T 2e7k_A 16 AGEHLGVTFRVE------------------GGELVIARILHGGMVA------QQGLLHVGDIIKEVNGQPVGSDPRALQE 71 (91)
T ss_dssp TTCCCCEEEEES------------------SSSEEEEEECSSSHHH------HHCCCCTTCEEEEETTEECTTCHHHHHH
T ss_pred CCCcEeEEEEec------------------CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCHHHHHH
Confidence 346899999861 1699999999999999 976 999999999999988 55555444
Q ss_pred hhcCCCCeeEEEEEEee
Q psy18070 141 WSINHPSITCHILLRLY 157 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r~~ 157 (169)
........+.+.+.|.+
T Consensus 72 ~l~~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 72 LLRNASGSVILKILSGP 88 (91)
T ss_dssp HHHTCCSSBCEEEECCS
T ss_pred HHHcCCCeEEEEEEECC
Confidence 43344556677777653
No 33
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.78 E-value=2.6e-08 Score=67.81 Aligned_cols=56 Identities=16% Similarity=0.030 Sum_probs=42.5
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r 155 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+ ..+........++...+.+.|
T Consensus 27 ~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAE------KAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVD 84 (91)
T ss_dssp SSEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEc
Confidence 699999999999999 99999999999999998876 344443333444555444444
No 34
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.78 E-value=1.7e-08 Score=68.80 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=44.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 32 ~gv~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGD------LGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 699999999999999 999999999999999887764 233233333455667777764
No 35
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.77 E-value=7.5e-09 Score=72.93 Aligned_cols=90 Identities=12% Similarity=-0.008 Sum_probs=67.4
Q ss_pred hhhHHHHHHhhhhcCCccceeecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCC
Q psy18070 42 IDYAIEFLTNYKRKDIDRTITHKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPT 121 (169)
Q Consensus 42 ~~~i~~~l~~l~~~g~~~~~~~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~G 121 (169)
.+.++++.+++.+.+ ...+.++|+.....+ ....|+.|..+.|+|||+ ++||++|
T Consensus 4 ~~~~~~~~~~l~~~~----~~~~~~~g~~~~~~~---------------~~~~G~~V~~~~pas~A~------~aGl~~G 58 (105)
T 2i4s_A 4 EDKVDAIREAIARNP----QEIFQYVRLSQVKRD---------------DKVLGYRVSPGKDPVLFE------SIGLQDG 58 (105)
T ss_dssp HHHHHHHHHHHHHSG----GGHHHHEEEEEEEET---------------TEEEEEEEEECSCTHHHH------HHTCCTT
T ss_pred hHHHHHHHHHHHHCH----HHHHhhceeEEEecC---------------CcEEEEEEecCCCCCHHH------HcCCCCC
Confidence 467888999999998 788899999865321 111488888888888889 9999999
Q ss_pred cEEEecCceeecchhhhh--hhhcCCCCeeEEEEEEe
Q psy18070 122 SSRLLGECLAQYTTSKLV--VWSINHPSITCHILLRL 156 (169)
Q Consensus 122 DvI~~~~~v~~~~~~~~~--~~~~~~~~~~~~~i~r~ 156 (169)
|+|+++|+.++.+..++. +........+.+.+.|+
T Consensus 59 DvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 59 DMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERD 95 (105)
T ss_dssp CEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEET
T ss_pred CEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEEC
Confidence 999999988776654443 33334556778888885
No 36
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=1.7e-08 Score=71.19 Aligned_cols=78 Identities=18% Similarity=0.066 Sum_probs=56.1
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVW 141 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~ 141 (169)
...+|+++..-... ........|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..+....
T Consensus 25 ~~glG~~i~~g~~~---------~~~~~~~~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS---------TPYKGDDEGIFISRVSEEGPAA------RAGVRVGDKLLEVNGVALQGAEHHEAVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS---------CCSSTTCCSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCeeeEEEEccccC---------CccccCCCCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 46789988643210 0001234799999999999999 99999999999999998877 4444444
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.......+.+.+.|.
T Consensus 90 ~~~~g~~v~l~v~R~ 104 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRE 104 (110)
T ss_dssp HHSCCSEEEEEEEEC
T ss_pred hhCCCCeEEEEEEEC
Confidence 344566778888885
No 37
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.76 E-value=1.1e-08 Score=70.69 Aligned_cols=77 Identities=18% Similarity=0.098 Sum_probs=50.6
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWS 142 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~ 142 (169)
.-+|+++........... ....|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+.....
T Consensus 16 ~~~Gf~l~~~g~~~~~~~--------~~~~~~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 16 QTFGFEIQTYGLHHREEQ--------RVEMVTFVARVHESSPAQ------LAGLTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCCSEEEEEEEC---------------CCEEEEEEEECTTCHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCccEEEEeccccccCCC--------CCCCCeEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 357888875321111111 223699999999999999 999999999999999988762 3333332
Q ss_pred cCCCCeeEEEEEE
Q psy18070 143 INHPSITCHILLR 155 (169)
Q Consensus 143 ~~~~~~~~~~i~r 155 (169)
...+..+.+.+++
T Consensus 82 ~~~~~~v~l~v~~ 94 (96)
T 2ego_A 82 KASGNVLRLETLY 94 (96)
T ss_dssp HHTTTEEEEEEEC
T ss_pred HhCCCeEEEEEEE
Confidence 2334566776654
No 38
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.76 E-value=1.6e-09 Score=78.99 Aligned_cols=80 Identities=13% Similarity=0.061 Sum_probs=57.9
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee--cchhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ--YTTSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~--~~~~~~~~~ 141 (169)
..+|+++...++..++.+++. ...|++|.+|.++|||+ ++| |++||+|+++|+..+ .+..+....
T Consensus 42 ~~lG~~i~~~~~~~~~~~g~~------~~~gv~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 109 (128)
T 1nf3_C 42 KPLGFYIRDGSSVRVTPHGLE------KVPGIFISRLVPGGLAQ------STGLLAVNDEVLEVNGIEVSGKSLDQVTDM 109 (128)
T ss_dssp SCCCEEEEEEEEEEEETTEEE------EEEEEEEEEECTTCHHH------HHTCCCTTCEEEEETTEESTTCCHHHHHHH
T ss_pred CCccEEEEccccccccccccC------CCCCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 458999987665444444432 12589999999999999 999 999999999999988 444444433
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.......+.+.+.|.
T Consensus 110 l~~~~~~v~l~v~r~ 124 (128)
T 1nf3_C 110 MIANSRNLIITVRPA 124 (128)
T ss_dssp HHHTTTSEEEEEECC
T ss_pred HHcCCCeEEEEEEEC
Confidence 334445678887774
No 39
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.75 E-value=1.6e-08 Score=68.95 Aligned_cols=57 Identities=12% Similarity=-0.124 Sum_probs=45.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchh--hhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTS--KLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~--~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+.. +...........+.+.+.|.
T Consensus 27 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 85 (91)
T 2pkt_A 27 QPLAISRVTPGSKAA------LANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARS 85 (91)
T ss_dssp EEEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEE
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 589999999999999 9999999999999998877654 44433333556678888875
No 40
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.75 E-value=1.8e-08 Score=68.17 Aligned_cols=57 Identities=14% Similarity=0.036 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+ ..++.......+..+.+.+.|.
T Consensus 26 ~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 84 (87)
T 2pa1_A 26 TPIMVTKVAERGKAK------DADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRI 84 (87)
T ss_dssp EEEEEEEECSSSHHH------HTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEec
Confidence 599999999999999 99999999999999998876 3444333333346778888875
No 41
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.73 E-value=1.7e-08 Score=69.21 Aligned_cols=57 Identities=19% Similarity=0.115 Sum_probs=45.4
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+. .+........+..+.+.++|+
T Consensus 29 ~~~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~ 87 (95)
T 3r68_A 29 KGQIIKDIEPGSPAE------AAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDK 87 (95)
T ss_dssp CSEEEECCCTTSHHH------HHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECC
Confidence 499999999999999 999999999999999887766 555444444566666666664
No 42
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.73 E-value=1.9e-08 Score=69.22 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=45.5
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 30 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 88 (96)
T 2v90_A 30 PGQFLWEVDPGLPAK------KAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDP 88 (96)
T ss_dssp EEEEEEEECTTSHHH------HTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECC
T ss_pred CCeEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECC
Confidence 699999999999999 99999999999999998877 3444433333456778888774
No 43
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.73 E-value=2.9e-08 Score=68.59 Aligned_cols=57 Identities=7% Similarity=-0.203 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 31 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPE------IDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHH------HHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeC
Confidence 689999999999999 999 99999999999998865 2333333334455678888775
No 44
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.72 E-value=2.1e-08 Score=70.14 Aligned_cols=57 Identities=7% Similarity=-0.030 Sum_probs=42.3
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+.++.+ ..++..........+.+.+.+.
T Consensus 36 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIH------RQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHH------HHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 599999999999999 999 99999999999888764 3333322222345556666543
No 45
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.72 E-value=3.1e-08 Score=68.96 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|+
T Consensus 35 ~gv~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 35 EGIFISFILAGGPAD------LSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 94 (104)
T ss_dssp CCEEEEEECTTSHHH------HHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 599999999999999 999 9999999999998874 44444444444455667777774
No 46
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.72 E-value=2.5e-08 Score=67.99 Aligned_cols=57 Identities=11% Similarity=0.042 Sum_probs=44.1
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 29 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 88 (92)
T 2qg1_A 29 TGVFVSDIVKGGIAD------ADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRI 88 (92)
T ss_dssp CSCEEEEECTTSHHH------HHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcc
Confidence 699999999999999 999 999999999999887653 233222223455678888775
No 47
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.71 E-value=4.7e-08 Score=71.00 Aligned_cols=57 Identities=14% Similarity=0.172 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+. .+...... .....+.+.+.|.
T Consensus 51 ~gv~V~~V~~gspA~------~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAA------KEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp SCEEEEEECTTCHHH------HTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 699999999999999 999999999999999887765 44433222 4556678888775
No 48
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.71 E-value=2.9e-08 Score=67.37 Aligned_cols=57 Identities=14% Similarity=-0.141 Sum_probs=44.3
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+ ..+...........+.+.+.|.
T Consensus 27 ~~v~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (89)
T 2q3g_A 27 VPLSISRLTPGGKAA------QAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRA 85 (89)
T ss_dssp EEEEEEEECTTSHHH------HTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeC
Confidence 589999999999999 99999999999999998774 2343333333455667888775
No 49
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.70 E-value=2.8e-08 Score=67.25 Aligned_cols=57 Identities=11% Similarity=-0.116 Sum_probs=44.5
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+. .+...........+.+.+.|.
T Consensus 27 ~~~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (88)
T 2uzc_A 27 MPLTISSLKDGGKAA------QANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRE 85 (88)
T ss_dssp EEEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCeEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 589999999999999 999999999999999887665 343333333455667777764
No 50
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.69 E-value=1.7e-08 Score=67.78 Aligned_cols=57 Identities=11% Similarity=-0.101 Sum_probs=43.8
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+. .+...........+.+.+.|.
T Consensus 25 ~~v~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 83 (85)
T 1rgw_A 25 MPLTISRITPGSKAA------QSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 83 (85)
T ss_dssp SCCBEEEECTTSHHH------HSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESC
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeC
Confidence 589999999999999 999999999999999887765 343333333344567777664
No 51
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.69 E-value=5.2e-08 Score=66.88 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=44.8
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ + ||++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 34 ~~gv~V~~V~~~spA~------~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPAS------K-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE 92 (95)
T ss_dssp CCCEEEEEECTTSTTT------T-TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCchh------h-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeC
Confidence 4699999999999999 9 999999999999988865 3343333334456678888875
No 52
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.69 E-value=3e-08 Score=69.47 Aligned_cols=70 Identities=17% Similarity=0.121 Sum_probs=51.6
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWS 142 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~ 142 (169)
.++|+++..-. ....|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..+....
T Consensus 27 ~~lG~~~~~~~---------------~~~~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~- 84 (104)
T 1wi2_A 27 AQLGFNIRGGK---------------ASQLGIFISKVIPDSDAH------RAGLQEGDQVLAVNDVDFQDIEHSKAVEI- 84 (104)
T ss_dssp CCCSEEEECCS---------------SSCCCCEEEEECTTSHHH------HHTCCTTCEEEEETTEECSSCCHHHHHHH-
T ss_pred CCccEEEEccc---------------CCCCCEEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHH-
Confidence 67899987521 122699999999999999 99999999999999988876 3333322
Q ss_pred cCCCCeeEEEEEEe
Q psy18070 143 INHPSITCHILLRL 156 (169)
Q Consensus 143 ~~~~~~~~~~i~r~ 156 (169)
++....+.+.+.|.
T Consensus 85 l~~~~~v~l~v~r~ 98 (104)
T 1wi2_A 85 LKTAREISMRVRFF 98 (104)
T ss_dssp HHHSSSEEEEEECC
T ss_pred HhCCCEEEEEEEEC
Confidence 22245667777664
No 53
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.69 E-value=2.9e-08 Score=74.95 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=53.7
Q ss_pred ecceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhh-hhh-
Q psy18070 63 HKKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSK-LVV- 140 (169)
Q Consensus 63 ~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~-~~~- 140 (169)
.++|+|+++...+ .|++|.+|.++|||+ +|||++||+|+++|+.++.+..+ ...
T Consensus 14 ~~~~lG~~~~~~~------------------~g~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~ 69 (166)
T 1w9e_A 14 QDGKIGLRLKSID------------------NGIFVQLVQANSPAS------LVGLRFGDQVLQINGENCAGWSSDKAHK 69 (166)
T ss_dssp TTSCCSEEEEEET------------------TEEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCcEeEEEEeCC------------------CCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 5689999998642 699999999999999 99999999999999988776544 332
Q ss_pred -hhcCCCCeeEEEEEEe
Q psy18070 141 -WSINHPSITCHILLRL 156 (169)
Q Consensus 141 -~~~~~~~~~~~~i~r~ 156 (169)
........+.+.+.|.
T Consensus 70 ~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 70 VLKQAFGEKITMTIRDR 86 (166)
T ss_dssp HHHHCCSSEEEEEEECC
T ss_pred HHhcCCCCEEEEEEEcC
Confidence 2222344667777443
No 54
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.66 E-value=5.5e-08 Score=66.76 Aligned_cols=57 Identities=23% Similarity=0.106 Sum_probs=45.5
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhh-hhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSK-LVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~-~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+... ..+..++....+.+.+.|.
T Consensus 29 ~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~g~~v~l~v~R~ 86 (93)
T 2dls_A 29 RIVLVQSVRPGGAAM------KAGVKEGDRIIKVNGTMVTNSSHLEVVKLIKSGAYVALTLLGS 86 (93)
T ss_dssp SSCEEEEECSSSTTT------TTTCCSSCEEEEETTEECSSSCHHHHHHHHTSSSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHhhcCCCEEEEEEEEC
Confidence 589999999999999 99999999999999988766422 2333445566778888875
No 55
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.66 E-value=3.5e-08 Score=66.98 Aligned_cols=57 Identities=7% Similarity=0.001 Sum_probs=43.1
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCC--CCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINH--PSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~--~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++| |++||+|+++|+..+. +..+........ ...+.+.+.|.
T Consensus 27 ~~~~V~~V~~~spA~------~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 27 EPIYIGHIVPLGAAD------TDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp SCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 579999999999999 999 9999999999999883 344433322222 23678887775
No 56
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.66 E-value=2.7e-08 Score=68.62 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=45.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+.++.+. .+...........+.+.+.|.
T Consensus 37 ~g~~V~~V~~~spA~------~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAH------LCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTF 96 (98)
T ss_dssp EEEEEEEECTTSHHH------HHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeC
Confidence 699999999999999 999 999999999999987764 444333333456778888874
No 57
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.66 E-value=3.6e-08 Score=68.07 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=42.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCC-eeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPS-ITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~-~~~~~i~r 155 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..++.......++ .+.+.+.|
T Consensus 33 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R 91 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAE------ASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR 91 (98)
T ss_dssp SCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCH
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC
Confidence 599999999999999 99999999999999998876 4444433333333 33455554
No 58
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.66 E-value=2.7e-08 Score=68.87 Aligned_cols=57 Identities=16% Similarity=0.100 Sum_probs=45.4
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 34 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 92 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQ------EAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTAL 92 (99)
T ss_dssp EEEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECS
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEEC
Confidence 488999999999999 9999999999999999887 44554444344556778888773
No 59
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=3e-08 Score=68.90 Aligned_cols=72 Identities=13% Similarity=0.023 Sum_probs=52.8
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhh-hhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLV-VWS 142 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~-~~~ 142 (169)
...+|+++....+ ...|++|.+|.++|||+ ++||++||+|+++|+..+.+..+.. +..
T Consensus 20 ~~~lG~~~~~~~~---------------~~~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 78 (101)
T 1uez_A 20 HEGLGFSIRGGSE---------------HGVGIYVSLVEPGSLAE------KEGLRVGDQILRVNDKSLARVTHAEAVKA 78 (101)
T ss_dssp TTCSSEEEEECTT---------------TTCCEEEEEECTTSHHH------HHTCCSSCCEEEETTEECSSCCHHHHHHH
T ss_pred CCcccEEEeCCCC---------------CCCCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCcCHHHHHHh
Confidence 3468999876432 12699999999999999 9999999999999988876654433 333
Q ss_pred cCCCCeeEEEEEEe
Q psy18070 143 INHPSITCHILLRL 156 (169)
Q Consensus 143 ~~~~~~~~~~i~r~ 156 (169)
.+....+.+.+.|.
T Consensus 79 ~~~~~~v~l~v~R~ 92 (101)
T 1uez_A 79 LKGSKKLVLSVYSA 92 (101)
T ss_dssp SSSSSSCCEEECCC
T ss_pred hcCCCeEEEEEEEC
Confidence 34445567777764
No 60
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=4.9e-08 Score=66.54 Aligned_cols=69 Identities=10% Similarity=-0.013 Sum_probs=50.7
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceeec--chhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQY--TTSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~~--~~~~~~~~ 141 (169)
..+|+++..- ...+++|.+|.++|||+ + +||++||.|+++|+..+. +..+....
T Consensus 13 ~~lG~~i~~~-----------------~~~~~~I~~V~~gspA~------~~agL~~GD~I~~Ing~~v~~~~~~~~~~~ 69 (88)
T 1kwa_A 13 EPMGITLKMN-----------------ELNHCIVARIMHGGMIH------RQGTLHVGDEIREINGISVANQTVEQLQKM 69 (88)
T ss_dssp SCCCEEEECS-----------------CGGGEEEEEECTTSHHH------HHTCCCTTCEEEEETTEEGGGSCHHHHHHH
T ss_pred CceeEEEEeC-----------------CCCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4589998741 12589999999999999 9 899999999999999876 44444433
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
....++.+.+.+.|.
T Consensus 70 l~~~~~~v~l~v~r~ 84 (88)
T 1kwa_A 70 LREMRGSITFKIVPS 84 (88)
T ss_dssp HHHCCEEEEEEEECC
T ss_pred HhcCCCcEEEEEECC
Confidence 333344667777664
No 61
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.66 E-value=2.1e-08 Score=68.46 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=43.8
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 27 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 85 (91)
T 2vsp_A 27 PGSFIKEVQKGGPAD------LAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGK 85 (91)
T ss_dssp SCCBC-CCCTTSHHH------HTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC-
T ss_pred CCeEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 689999999999999 9999999999999999886 44444433333356678877774
No 62
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.65 E-value=5.1e-08 Score=66.63 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=44.5
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 32 ~~gv~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQ------KDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP 92 (94)
T ss_dssp BCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 3699999999999999 999 999999999999887663 343333333445667777663
No 63
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.65 E-value=1.7e-08 Score=69.33 Aligned_cols=57 Identities=12% Similarity=-0.020 Sum_probs=45.7
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+. .+........+..+.+.+.|.
T Consensus 30 ~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 88 (94)
T 1vb7_A 30 TPIIVTKVTERGKAE------AADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRS 88 (94)
T ss_dssp EEEECCCBCTTSSHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECC
T ss_pred CCeEEEEECCCCHHH------HCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC
Confidence 599999999999999 999999999999999988765 444433333346678888875
No 64
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.65 E-value=3.7e-08 Score=67.82 Aligned_cols=57 Identities=18% Similarity=0.090 Sum_probs=45.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 32 ~~~~V~~V~~~spA~------~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 91 (97)
T 2jil_A 32 RPVVITSVRPGGPAD------REGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYD 91 (97)
T ss_dssp EEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 699999999999999 999 99999999999988876 4444433333556778888875
No 65
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=4.5e-08 Score=66.84 Aligned_cols=59 Identities=19% Similarity=0.066 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEeeE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLYL 158 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~~ 158 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..+...........+.+.+.|.--
T Consensus 24 ~~~~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAE------RAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVP 84 (91)
T ss_dssp SSCEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 579999999999999 99999999999999988775 233333333334567888888643
No 66
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.65 E-value=4e-08 Score=68.42 Aligned_cols=57 Identities=19% Similarity=0.115 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.++|+
T Consensus 30 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 88 (102)
T 2d90_A 30 KGQIIKDIEPGSPAE------AAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDK 88 (102)
T ss_dssp SSEEEECCCTTSTTT------TTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECST
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEEC
Confidence 699999999999999 999999999999998887663 233322223356678888764
No 67
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.64 E-value=7e-08 Score=69.03 Aligned_cols=71 Identities=14% Similarity=0.032 Sum_probs=50.1
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee--cchhhhhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ--YTTSKLVV 140 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~--~~~~~~~~ 140 (169)
.+.+|+++..-. ....|++|.+|.++|||+ ++| |++||+|+++|+.++ .+..+...
T Consensus 35 ~~~lG~~l~~~~---------------~~~~~~~V~~V~~gspA~------~aG~L~~GD~I~~Ing~~v~~~~~~~~~~ 93 (114)
T 2gzv_A 35 QNLIGISIGGGA---------------QYCPCLYIVQVFDNTPAA------LDGTVAAGDEITGVNGRSIKGKTKVEVAK 93 (114)
T ss_dssp TSCCSEEEEECC---------------C--CCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCcEeEEEEeCC---------------CCCCCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 456999987532 112589999999999999 999 999999999999988 54444443
Q ss_pred hhcCCCCeeEEEEEE
Q psy18070 141 WSINHPSITCHILLR 155 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r 155 (169)
.....+..+.+.+.+
T Consensus 94 ~l~~~~~~v~l~v~~ 108 (114)
T 2gzv_A 94 MIQEVKGEVTIHYNK 108 (114)
T ss_dssp HHHHCCSEEEEEEEC
T ss_pred HHHcCCCeEEEEEEe
Confidence 333334445555543
No 68
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.64 E-value=4.1e-08 Score=68.57 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=41.9
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT 134 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~ 134 (169)
..+|+++..++++ ...|++|.+|.++|||+ ++||++||+|+++|+.++.+
T Consensus 20 ~~~Gf~v~~~~~~--------------~~~g~~V~~V~~~spA~------~aGL~~GD~Il~vng~~v~~ 69 (94)
T 3kzd_A 20 DTYGFSLSSVEED--------------GIRRLYVNSVKETGLAS------KKGLKAGDEILEINNRAADA 69 (94)
T ss_dssp -CCSEEEEEECSS--------------SSCEEEEEEECTTSHHH------HTTCCTTCEEEEETTEEGGG
T ss_pred CCcCEEEEecCCC--------------CcCCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCC
Confidence 4689999876531 22699999999999999 99999999999999988765
No 69
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.64 E-value=9.1e-08 Score=64.25 Aligned_cols=56 Identities=13% Similarity=-0.002 Sum_probs=41.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCC--CCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINH--PSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~--~~~~~~~i~r 155 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+.++.+ ..+........ ...+.+.+.|
T Consensus 25 ~~~~V~~v~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAA------LDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 589999999999999 999 99999999999998863 23333222222 4455666654
No 70
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.64 E-value=5.4e-08 Score=67.63 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=46.1
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.-
T Consensus 33 ~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAA------MDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQ 94 (102)
T ss_dssp CCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 3699999999999999 999 99999999999988765 33333333334567788888864
No 71
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.64 E-value=1.3e-08 Score=74.58 Aligned_cols=67 Identities=13% Similarity=0.061 Sum_probs=51.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhc--CCCCeeEEEEEEeeEEeeccccc
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSI--NHPSITCHILLRLYLLVCSELTK 166 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~--~~~~~~~~~i~r~~~~v~~~~~~ 166 (169)
.+++|.+|.++|||+ ++| |++||+|+++|+..+. +..++..... .....+.+.+.|.|+.+..++.+
T Consensus 49 ~~v~V~~V~~gspA~------~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~~~~i~~~~~~ 120 (126)
T 1wif_A 49 PYLQISHLINKGAAA------SDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRGFLEIPQEWQD 120 (126)
T ss_dssp TEEEECCCCTTSSGG------GCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESSSSCCCTTTCC
T ss_pred CcEEEEEECCCCHHH------HcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEECCCccCceecc
Confidence 579999999999999 999 9999999999988874 3333333222 23557799999998877766554
No 72
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.63 E-value=8.8e-08 Score=66.03 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=43.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 30 ~~~~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 89 (97)
T 1n7e_A 30 DPIIISSLTKGGLAE------RTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQ 89 (97)
T ss_dssp SCCEEEEECTTSHHH------HHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 689999999999999 999 99999999999998854 2333322223455667887774
No 73
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.63 E-value=2.7e-08 Score=66.69 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 23 ~~~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPAD------FVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTT------TTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 589999999999999 999999999999999887665 444433333345567777764
No 74
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.63 E-value=6.5e-08 Score=67.72 Aligned_cols=58 Identities=9% Similarity=0.066 Sum_probs=46.0
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|..
T Consensus 33 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 93 (105)
T 2awx_A 33 NSIYVTKIIEGGAAH------KDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPT 93 (105)
T ss_dssp CCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 699999999999999 999 99999999999988854 34433333344567788888854
No 75
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.62 E-value=7.9e-08 Score=65.99 Aligned_cols=57 Identities=18% Similarity=0.088 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 33 ~g~~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 92 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAE------SDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKG 92 (96)
T ss_dssp SCCEEEEECTTSHHH------HTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCEEEEEeCCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 699999999999999 999 99999999999988773 3444433333455667777764
No 76
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.62 E-value=6.9e-08 Score=68.05 Aligned_cols=57 Identities=9% Similarity=-0.074 Sum_probs=44.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 45 ~gv~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAW------RAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEEC
Confidence 599999999999999 999999999999999887665 444433333345567776664
No 77
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.62 E-value=1.1e-07 Score=66.16 Aligned_cols=73 Identities=7% Similarity=-0.000 Sum_probs=51.3
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceee--cchhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQ--YTTSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~--~~~~~~~~~ 141 (169)
.+||+++..-.. + ....|++|.+|.++|||+ + +||++||+|+++|+..+ .+..+....
T Consensus 21 ~~lG~~i~~~~~------~-------~~~~~~~V~~V~~~spA~------~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~ 81 (101)
T 2yt7_A 21 EGLGVALVESGW------G-------SLLPTAVIANLLHGGPAE------RSGALSIGDRLTAINGTSLVGLPLAACQAA 81 (101)
T ss_dssp CCCCEEEEECCC------S-------SSSCCEEEEEECTTSTTG------GGSSCCTTCEEEEESSCBCTTSCHHHHHHH
T ss_pred CccCEEEEeCCC------C-------CCccCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 579999974210 0 112489999999999999 9 67999999999998887 444444433
Q ss_pred hcC--CCCeeEEEEEEe
Q psy18070 142 SIN--HPSITCHILLRL 156 (169)
Q Consensus 142 ~~~--~~~~~~~~i~r~ 156 (169)
... ....+.+.+.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 222 455667777763
No 78
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.62 E-value=8.3e-08 Score=68.57 Aligned_cols=69 Identities=13% Similarity=0.125 Sum_probs=51.9
Q ss_pred eecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhh
Q psy18070 66 YIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWS 142 (169)
Q Consensus 66 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~ 142 (169)
.+|+++..... ..|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+.....
T Consensus 26 glG~~l~~~~~----------------~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 83 (119)
T 1tp5_A 26 GLGFNIVGGED----------------GEGIFISFILAGGPAD------LSGELRKGDQILSVNGVDLRNASHEQAAIAL 83 (119)
T ss_dssp CCCEEEEECGG----------------GCCEEEEEECTTSHHH------HHSCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEecCCC----------------CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 38888875431 1699999999999999 999 999999999999887654 3333333
Q ss_pred cCCCCeeEEEEEEe
Q psy18070 143 INHPSITCHILLRL 156 (169)
Q Consensus 143 ~~~~~~~~~~i~r~ 156 (169)
......+.+.+.|+
T Consensus 84 ~~~~~~v~l~v~r~ 97 (119)
T 1tp5_A 84 KNAGQTVTIIAQYK 97 (119)
T ss_dssp HTSCSEEEEEEEEC
T ss_pred HcCCCeEEEEEEEC
Confidence 34455668888774
No 79
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=8.5e-08 Score=68.81 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=45.7
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 53 ~~gv~V~~V~~gspA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 113 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQ------KDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKP 113 (117)
T ss_dssp BCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 3699999999999999 999 9999999999998877 44444433334456678888775
No 80
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.61 E-value=9.3e-08 Score=68.95 Aligned_cols=58 Identities=16% Similarity=0.026 Sum_probs=47.0
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 52 ~~gv~V~~V~~gspA~------~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~ 112 (118)
T 3b76_A 52 DLPIYVISVEPGGVIS------RDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEV 112 (118)
T ss_dssp CCCEEEEEECTTSHHH------HHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 3699999999999999 999 9999999999999877 55555544445566678887774
No 81
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.61 E-value=7.5e-08 Score=67.81 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=45.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+........+..+.+.+.|.
T Consensus 32 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 91 (106)
T 4amh_A 32 NSIYVTKIIEGGAAH------KDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKP 91 (106)
T ss_dssp CCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 599999999999999 999 99999999999988754 3444444444566778888884
No 82
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.61 E-value=8.1e-08 Score=66.18 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=44.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+........+..+.+.+.|.
T Consensus 30 ~gv~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 89 (98)
T 2opg_A 30 GAIIIHEVYEEGAAC------KDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHH------hCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 599999999999999 999 999999999999887653 333333333446668888774
No 83
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=4.1e-08 Score=67.45 Aligned_cols=57 Identities=12% Similarity=-0.179 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++||++||+|+++|+.++.+. .+...........+.+.+.|.
T Consensus 32 ~~v~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (94)
T 2eeg_A 32 APLTISRVHAGSKAA------LAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSSG 90 (94)
T ss_dssp SCCEECCCCSSSHHH------HTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 689999999999999 999999999999999887763 333333333445567777764
No 84
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=6.8e-08 Score=67.63 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=45.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 38 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 97 (105)
T 1wha_A 38 AGIFVSRIAEGGAAH------RAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLERE 97 (105)
T ss_dssp CSCEEEECCTTSSHH------HHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEEC
T ss_pred CCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 699999999999999 999 99999999999888765 3444433333456678888875
No 85
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.60 E-value=1.7e-07 Score=65.35 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=44.8
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhh--cCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWS--INHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~--~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ + ||++||+|+++++.++.+..++.... ......+.+.+.|.
T Consensus 6 ~~Gv~V~~V~~~spA~------~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~ 64 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAA------D-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHG 64 (100)
T ss_dssp CCCEEEEEECTTSGGG------G-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred CCCEEEEEeCCCCchH------H-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 3799999999999999 7 99999999999888877655444333 23455678888885
No 86
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.60 E-value=1.5e-08 Score=69.15 Aligned_cols=57 Identities=9% Similarity=-0.022 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee--cchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ--YTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~--~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+ .+..+........++.+.+.+.+.
T Consensus 21 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLAT------KDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCC
Confidence 589999999999999 999 999999999999887 444444444344555666666553
No 87
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.60 E-value=4.7e-08 Score=69.50 Aligned_cols=57 Identities=19% Similarity=0.101 Sum_probs=44.7
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 38 ~g~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 96 (114)
T 2edz_A 38 DGHLIRVIEEGSPAE------KAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDG 96 (114)
T ss_dssp CSCEEECCCTTCTTG------GGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEEEECH
T ss_pred CCeEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEEC
Confidence 699999999999999 999999999999998887663 333322223356778888874
No 88
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.60 E-value=6e-08 Score=68.59 Aligned_cols=57 Identities=7% Similarity=-0.200 Sum_probs=44.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+.........+.+.+.+.|.
T Consensus 25 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPE------IDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHH------HHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeC
Confidence 699999999999999 999 99999999999888765 3333333334445678888874
No 89
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=8.6e-08 Score=69.50 Aligned_cols=57 Identities=16% Similarity=0.014 Sum_probs=46.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchh-hhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTS-KLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~-~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+.. +.++..++....+.+.+.|.
T Consensus 46 ~gv~V~~V~~~spA~------~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~v~l~v~R~ 103 (128)
T 1uf1_A 46 LGIYITGVDPGSEAE------GSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDV 103 (128)
T ss_dssp CCCEEEEECTTCHHH------HHTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCeEEEEEEEC
Confidence 599999999999999 9999999999999998877642 33444455556778888885
No 90
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.60 E-value=3.6e-08 Score=68.99 Aligned_cols=57 Identities=19% Similarity=0.095 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchh--hhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTS--KLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~--~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+.. +...........+.+.+.|.
T Consensus 26 ~g~~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAE------KAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDG 84 (106)
T ss_dssp CSCEEECCCTTSHHH------HTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECH
T ss_pred CCEEEEEeCCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEEC
Confidence 689999999999999 9999999999999998876653 33333334456778888774
No 91
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=8.1e-08 Score=67.69 Aligned_cols=58 Identities=14% Similarity=0.055 Sum_probs=45.7
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+...........+.+.+.|.
T Consensus 35 ~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 95 (110)
T 1um1_A 35 APGLYIQTLLPGSPAA------ADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKS 95 (110)
T ss_dssp CSSEEEEEECTTSHHH------HHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 3699999999999999 999 99999999999887753 4444444444456678888875
No 92
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.60 E-value=8.1e-08 Score=65.72 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=45.3
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee--cchhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ--YTTSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~--~~~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.+++|.+|.++|||+ ++| |++||+|+++|+..+ .+..+........++.+.+.++|.+
T Consensus 28 ~~~~V~~v~~gspA~------~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 28 GAIIVARIMRGGAAD------RSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp CCEEEEEECTTSHHH------HHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 689999999999999 999 999999999999988 5545544444344556677777654
No 93
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=4.2e-08 Score=70.51 Aligned_cols=57 Identities=12% Similarity=0.047 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+........+..+.+.+.|.
T Consensus 53 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 112 (117)
T 2fne_A 53 LPIYVKTVFAKGAAS------EDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSS 112 (117)
T ss_dssp EEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 589999999999999 999 9999999999998887 44444433333445578888775
No 94
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.59 E-value=8.1e-08 Score=67.26 Aligned_cols=58 Identities=10% Similarity=0.061 Sum_probs=45.7
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|+
T Consensus 37 ~~gv~V~~V~~~spA~------~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 97 (106)
T 3axa_A 37 KLGIYVKSVVKGGAAD------VDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQ 97 (106)
T ss_dssp SEEEEEEEEBTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 3699999999999999 999 99999999999988764 3444333334556678888875
No 95
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=7.6e-08 Score=65.62 Aligned_cols=57 Identities=16% Similarity=0.007 Sum_probs=42.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|+
T Consensus 30 ~~~~V~~V~~~spA~------~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 89 (93)
T 2dkr_A 30 SPIYISRVIPGGVAD------RHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSG 89 (93)
T ss_dssp CCCEEEEECTTSHHH------HHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 699999999999999 996 999999999999887742 333322222344567777663
No 96
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.59 E-value=1.1e-07 Score=65.85 Aligned_cols=58 Identities=14% Similarity=0.009 Sum_probs=44.6
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 36 ~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (101)
T 2jik_A 36 DSGIYVSRIKENGAAA------LDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHR 96 (101)
T ss_dssp BCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 3699999999999999 999 999999999999887653 333333333455667777774
No 97
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.58 E-value=1.2e-07 Score=67.51 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=43.7
Q ss_pred CcEEEEEEccCCcccccccccccCC-CCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGI-KPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL-~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++|| ++||+|+++|+..+.. ..+...........+.+.+.|.
T Consensus 48 ~gv~V~~V~~~spA~------~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 107 (113)
T 1va8_A 48 DSVIISRIVKGGAAE------KSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPS 107 (113)
T ss_dssp SSEEEEEECTTSHHH------HHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 699999999999999 9999 9999999999998873 3333333323445667777664
No 98
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.57 E-value=1.2e-07 Score=64.46 Aligned_cols=56 Identities=9% Similarity=-0.100 Sum_probs=43.1
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r 155 (169)
.|++|.+|.++|||+ ++ ||++||+|+++|+..+.+. .+...........+.+.+.|
T Consensus 30 ~g~~V~~V~~~spA~------~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAAD------QTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHH------HTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 589999999999999 99 9999999999999988653 33333333344566777766
No 99
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=1.9e-07 Score=67.28 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=45.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcC--CCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSIN--HPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~--~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+....... ....+.+.+.|..
T Consensus 44 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAA------QDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp CCCEEEEECTTSHHH------HTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESC
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 689999999999999 999 99999999999988763 3333333223 3567788888865
No 100
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=9.6e-08 Score=67.41 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=43.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 38 ~g~~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 97 (111)
T 2dlu_A 38 SGVVVRTIVPGGLAD------RDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARD 97 (111)
T ss_dssp SSBEEEEECTTSSHH------HHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEES
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 699999999999999 999 99999999999888763 2333322222345668888775
No 101
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=7e-08 Score=67.81 Aligned_cols=58 Identities=19% Similarity=0.098 Sum_probs=45.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.-
T Consensus 42 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAE------SDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp CCCBEEEECTTSTHH------HHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCC
T ss_pred CCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 699999999999999 999 9999999999998876 334444333334567788888753
No 102
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.56 E-value=1.4e-07 Score=67.31 Aligned_cols=58 Identities=12% Similarity=-0.059 Sum_probs=43.6
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCC-eeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPS-ITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~-~~~~~i~r~~ 157 (169)
.+++|.+|.++|||+ +|||++||+|+++|+.++. +..+........++ .+.+.+.|..
T Consensus 44 ~~v~V~~V~~gspA~------~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 44 APVQVHFLDPYCSAS------VAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp SSCEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 579999999999999 9999999999999998877 33444433333333 3677777643
No 103
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=1.2e-07 Score=66.63 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEee
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
..|++|.+|.++|||+ ++ ||++||+|+++|+..+... .+...........+.+.++|+-
T Consensus 40 ~~gv~V~~V~~~spA~------~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAA------KEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHH------HTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 4699999999999999 99 9999999999999888543 3333333334566788888753
No 104
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.55 E-value=7.1e-08 Score=67.69 Aligned_cols=76 Identities=18% Similarity=0.196 Sum_probs=52.6
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~ 141 (169)
..+|+++....... ......|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+....
T Consensus 25 ~~lG~~~~~~~~~~----------~~~~~~gv~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 88 (108)
T 2jre_A 25 SSLGISISGMRDQS----------TTGEATGIYVKSLIPGSAAA------LDGRIEPNDKILRVDDVNVQGMAQSDVVEV 88 (108)
T ss_dssp SCCSEEEECCCCCS----------CSSCCCCCEEEEECTTSHHH------HHSSCCSSEEEEEETTEECTTSCHHHHHHH
T ss_pred CCcCEEEEcccCCC----------CCCCCCCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45888887432110 00133699999999999999 999 99999999999998866 2333322
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.......+.+.+.|.
T Consensus 89 l~~~g~~v~l~v~R~ 103 (108)
T 2jre_A 89 LRNAGNPVRLLLIRR 103 (108)
T ss_dssp HHHHCSEEEEEEEEC
T ss_pred HHcCCCeEEEEEEeC
Confidence 222345667887775
No 105
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=8.7e-08 Score=67.29 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=46.2
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.-
T Consensus 39 ~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQ------RDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREK 100 (107)
T ss_dssp EEEEEEEEECTTCHHH------HHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCC
Confidence 3699999999999999 999 99999999999988764 34433333334567788888753
No 106
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.55 E-value=3.5e-08 Score=68.10 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=43.9
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcC--CCCeeEEEEEEe
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSIN--HPSITCHILLRL 156 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~--~~~~~~~~i~r~ 156 (169)
|++|.+|.++|||+ + ||++||+|+++|+.++.+..++...... ....+.+.+.|.
T Consensus 2 Gv~V~~V~~~spA~------~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAK------G-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCS------S-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESS
T ss_pred ceEEEEECCCChHH------H-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 88999999999999 8 9999999999998887766555544333 245678888885
No 107
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.54 E-value=5.1e-08 Score=76.53 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=54.0
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCC-CcEEEecCce-eecchhhhhhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKP-TSSRLLGECL-AQYTTSKLVVW 141 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~-GDvI~~~~~v-~~~~~~~~~~~ 141 (169)
..++|+++..++++.++. .|++|.+|.++|||+ +|||++ ||+|+++++. ....++...+.
T Consensus 94 ~~~lGi~~~~~~~~~~~~------------~Gv~V~~V~~~spA~------~aGl~~~GD~I~~ing~v~~~~~l~~~l~ 155 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANE------------NVWHVLEVESNSPAA------LAGLRPHSDYIIGADTVMNESEDLFSLIE 155 (209)
T ss_dssp SSSSCEEEEEEECTTGGG------------SCEEEEEECTTSHHH------HHTCCTTTEEEEEESSCCCSSSCHHHHHH
T ss_pred cCccceEEeecChhHccc------------cceEEEEeCCCChHH------HCCCCCCCCEEEECCCEeCCHHHHHHHHH
Confidence 357899998877654321 699999999999999 999999 9999997765 23333433343
Q ss_pred hcCCCCeeEEEEEEe
Q psy18070 142 SINHPSITCHILLRL 156 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~ 156 (169)
.. ....+.+.++|+
T Consensus 156 ~~-~g~~v~l~v~r~ 169 (209)
T 3rle_A 156 TH-EAKPLKLYVYNT 169 (209)
T ss_dssp HT-TTSCEEEEEEET
T ss_pred hC-CCCeEEEEEEEC
Confidence 33 455678888884
No 108
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.54 E-value=1.6e-07 Score=66.51 Aligned_cols=71 Identities=10% Similarity=0.016 Sum_probs=50.5
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhh-hhhhc
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKL-VVWSI 143 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~-~~~~~ 143 (169)
.-+|+++.... +...|++|..|.++|||+ ++||++||+|+++|+..+.+.... ....+
T Consensus 27 ~~lG~~l~~~~---------------~~~~gv~V~~V~~~s~A~------~aGL~~GD~Il~vng~~v~~~~~~~~~~~~ 85 (114)
T 1x5n_A 27 RGLGCSISSGP---------------IQKPGIFISHVKPGSLSA------EVGLEIGDQIVEVNGVDFSNLDHKEAVNVL 85 (114)
T ss_dssp CCCCEEEEECC---------------SSSCSEEEEEECTTSTTT------TTTCCTTCEEEEETTEETTSCCTTHHHHHH
T ss_pred CceeEEEeecC---------------CCCCCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34789887653 123699999999999999 999999999999998877554321 22222
Q ss_pred CCCCeeEEEEEEe
Q psy18070 144 NHPSITCHILLRL 156 (169)
Q Consensus 144 ~~~~~~~~~i~r~ 156 (169)
.....+.+.++|.
T Consensus 86 ~~~~~v~l~v~r~ 98 (114)
T 1x5n_A 86 KSSRSLTISIVAA 98 (114)
T ss_dssp HHCSSEEEEECSS
T ss_pred hcCCeEEEEEEcC
Confidence 2234567777765
No 109
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.53 E-value=4.9e-08 Score=69.59 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=45.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec---chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY---TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~---~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 49 ~gv~V~~V~~~spA~------~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~ 109 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAH------RDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARG 109 (117)
T ss_dssp EEEEECCCCTTSHHH------HHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESS
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 699999999999999 999 9999999999999886 44444433333556778888875
No 110
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=2.3e-08 Score=70.71 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=47.8
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEeeEE
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLYLL 159 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~~~ 159 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.+-.
T Consensus 43 ~~gv~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 43 DEGIFISKVSPTGAAG------RDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp CCCCEEEEECTTSHHH------HHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCCCC
T ss_pred CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 4699999999999999 999 99999999999988773 4444444334455668888887754
No 111
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.53 E-value=9.3e-08 Score=66.62 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=44.6
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ + ||++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 42 ~~gv~V~~V~~~spA~------~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPAS------K-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVRE 100 (103)
T ss_dssp CCSEECCCBSSSSTTS------S-SCCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCCEEEEEECCCCchH------H-CCCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEec
Confidence 4699999999999999 9 999999999999988765 3343333334456678888775
No 112
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.53 E-value=1.7e-07 Score=66.54 Aligned_cols=57 Identities=16% Similarity=0.073 Sum_probs=44.3
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++++..+.+. .+...........+.+.+.|.
T Consensus 49 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAE------RSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRG 108 (112)
T ss_dssp CCEEEEEECTTSHHH------HTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 699999999999999 999 999999999999887553 333333333455668888775
No 113
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.53 E-value=1.9e-07 Score=66.49 Aligned_cols=57 Identities=23% Similarity=0.182 Sum_probs=43.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 50 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~ 109 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAG------KTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSL 109 (117)
T ss_dssp CSEEEEEECSSSTTT------SSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCB
T ss_pred CCEEEEEeCCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 699999999999999 999 99999999999888754 3333333333455667777664
No 114
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.52 E-value=5.2e-08 Score=68.10 Aligned_cols=57 Identities=16% Similarity=0.073 Sum_probs=45.6
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++||++||+|+++|+.++.+ ..++..........+.+.+.|.
T Consensus 29 ~~~~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 87 (103)
T 1v5l_A 29 QPLVITRITPGSKAA------AANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA 87 (103)
T ss_dssp EEEECSCBCTTSTTG------GGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCC
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 489999999999999 99999999999999998877 4444443333356678888774
No 115
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.52 E-value=1.2e-07 Score=65.41 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=44.9
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhh--hcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVW--SINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~--~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ + ||++||+|+++|+.++.+..++... .......+.+.+.|.
T Consensus 4 ~~Gv~V~~V~~~spA~------~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAA------G-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRD 62 (94)
T ss_dssp CCCEECCCCCTTSTTB------T-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEET
T ss_pred CCcEEEEEECCCChHH------h-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 3799999999999999 8 9999999999988877665444433 223456778999885
No 116
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=1.1e-07 Score=66.31 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=44.5
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCC--CCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINH--PSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~--~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+........ ...+.+.+.|.-
T Consensus 34 ~~~~V~~V~~~spA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 34 QPILIGAVIAMGSAD------RDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp SCCBEEEECTTSTTG------GGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEEeCCCChHH------hCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCC
Confidence 689999999999999 999 99999999999998854 33333222222 467788888864
No 117
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=98.52 E-value=5.7e-08 Score=76.06 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=29.4
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeee
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
++|||++++||||||||+|.+|++|||++..
T Consensus 131 ~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~ 161 (198)
T 2h5c_A 131 LTQGNACMGRGDSGGSWITSAGQAQGVMSGG 161 (198)
T ss_dssp EEEECSCCBTTCTTCEEECTTCBEEEEEEEE
T ss_pred eEEecccCCCCcceeEEEeeCCEEEEEEEee
Confidence 4899999999999999999999999999986
No 118
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=7.8e-08 Score=66.89 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=44.2
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecchhhhhhhhc-CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTTSKLVVWSI-NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++ ||++||+|+++|+.++.+..+.....+ .....+.+.+.|.
T Consensus 35 ~~v~V~~V~~~spA~------~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~v~l~v~R~ 93 (100)
T 2edp_A 35 EPLTVSKIEDGGKAA------LSQKMRTGDELVNINGTPLYGSRQEALILIKGSFRILKLIVRRR 93 (100)
T ss_dssp EEEEECCCCTTSHHH------HHTSCCTTCEEEEETTEECCSCSHHHHHHHHTCCSSCEEEEEEC
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCCEEEEECCEEccchHHHHHHHHHhCCCeEEEEEEeC
Confidence 479999999999999 99 999999999999998877423233222 3345668888875
No 119
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=1.7e-07 Score=67.12 Aligned_cols=60 Identities=13% Similarity=-0.013 Sum_probs=46.0
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecchh--hhhhhhcCCCCeeEEEEEEeeE
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTTS--KLVVWSINHPSITCHILLRLYL 158 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~~--~~~~~~~~~~~~~~~~i~r~~~ 158 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+.. +...........+.+.+.|...
T Consensus 46 ~~gv~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAA------LDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHH------HSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4699999999999999 999 9999999999998876642 3333322235567888888654
No 120
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.51 E-value=8.6e-08 Score=67.86 Aligned_cols=60 Identities=13% Similarity=-0.016 Sum_probs=46.8
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEeeE
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLYL 158 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~~ 158 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.--
T Consensus 34 ~~g~~V~~V~~~s~A~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAH------RDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERP 96 (113)
T ss_dssp CEEEEEEECCTTSHHH------HHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCC
T ss_pred CCCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Confidence 3699999999999999 999 99999999999988764 344333333345677888888643
No 121
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.51 E-value=2.2e-07 Score=68.16 Aligned_cols=58 Identities=9% Similarity=-0.086 Sum_probs=44.3
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.. ..+...........+.+.+.|.-
T Consensus 65 ~gv~V~~V~~gspA~------~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 65 ALQYLESVDEGGVAW------RAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp CSEEEEEECTTSGGG------GGTCCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 589999999999999 99999999999999887764 33333333334556677777654
No 122
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.50 E-value=1.5e-07 Score=65.87 Aligned_cols=57 Identities=14% Similarity=-0.010 Sum_probs=44.3
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.+++|..|.++|||+ ++||++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 43 p~~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 101 (107)
T 3qe1_A 43 PLQHVSAVLPGGAAD------RAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSV 101 (107)
T ss_dssp CCEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECS
T ss_pred CceEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcC
Confidence 467899999999999 9999999999999999887 44444443334456677777774
No 123
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=5e-08 Score=70.12 Aligned_cols=70 Identities=13% Similarity=0.063 Sum_probs=50.3
Q ss_pred eecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch-hhhhhhhcC
Q psy18070 66 YIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT-SKLVVWSIN 144 (169)
Q Consensus 66 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~-~~~~~~~~~ 144 (169)
.+|+++..+++. + ..|++|..|.++|||+ ++||++||+|+++|+.++.+. .+.....+.
T Consensus 30 ~~G~~v~~~~~~-----~---------~~gv~V~~V~~~spA~------~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (114)
T 2d8i_A 30 TYGFSLSSVEED-----G---------IRRLYVNSVKETGLAS------KKGLKAGDEILEINNRAADALNSSMLKDFLS 89 (114)
T ss_dssp CCCCEEEEEEET-----T---------EEEEEEEECCTTSSHH------HHTCCTTCCEEEESSCBGGGCCHHHHHHHHT
T ss_pred ccCEEEEecCcC-----C---------cCCEEEEEeCCCCHHH------HcCCCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 369988765432 1 1589999999999999 999999999999998887663 222333333
Q ss_pred CCCeeEEEEEEe
Q psy18070 145 HPSITCHILLRL 156 (169)
Q Consensus 145 ~~~~~~~~i~r~ 156 (169)
. ..+.+.+.|.
T Consensus 90 ~-~~v~l~v~R~ 100 (114)
T 2d8i_A 90 Q-PSLGLLVRTY 100 (114)
T ss_dssp S-SEEEEEEEEC
T ss_pred C-CcEEEEEEEC
Confidence 3 3667777764
No 124
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.50 E-value=2.5e-07 Score=63.22 Aligned_cols=76 Identities=13% Similarity=0.029 Sum_probs=52.9
Q ss_pred cceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhh
Q psy18070 64 KKYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVV 140 (169)
Q Consensus 64 ~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~ 140 (169)
...+|+++........ ....|++|.+|.++|||+ ++| |++||+|+++++..+.+. .+...
T Consensus 14 ~~~lG~~i~~~~~~~~-----------~~~~~~~V~~v~~~s~A~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 76 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKK-----------LEPSGIFVKSITKSSAVE------HDGRIQIGDQIIAVDGTNLQGFTNQQAVE 76 (97)
T ss_dssp TTBSCEEEECCCCC---------------CCCCEEEEECTTCHHH------HHCCCCTTCEEEEETTEECTTSCHHHHHH
T ss_pred CCCCcEEEEccCCCCC-----------CCCCCEEEEEeCCCChHH------hCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3568999875421100 123699999999999999 999 999999999999887653 33332
Q ss_pred hhcCCCCeeEEEEEEe
Q psy18070 141 WSINHPSITCHILLRL 156 (169)
Q Consensus 141 ~~~~~~~~~~~~i~r~ 156 (169)
........+.+.+.|.
T Consensus 77 ~~~~~~~~v~l~v~r~ 92 (97)
T 2iwn_A 77 VLRHTGQTVLLTLMRR 92 (97)
T ss_dssp HHHTCCSEEEEEEEEE
T ss_pred HHHcCCCeEEEEEEeC
Confidence 2233455667887774
No 125
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.49 E-value=2e-07 Score=62.81 Aligned_cols=55 Identities=15% Similarity=0.065 Sum_probs=40.2
Q ss_pred CcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILL 154 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~ 154 (169)
.|++|.+|.++|||+ + +||++||+|+++|+..+.+. .+........+..+.+.+.
T Consensus 28 ~~~~V~~V~~gspA~------~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 85 (87)
T 4e34_A 28 VPILISEIHPGQPAD------RCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVV 85 (87)
T ss_dssp EEEEEEEECTTSHHH------HHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CCEEEEEECCCCHHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 579999999999999 9 79999999999999887433 3333333333444455543
No 126
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.49 E-value=5.4e-08 Score=67.93 Aligned_cols=58 Identities=10% Similarity=-0.121 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.+++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.-
T Consensus 29 ~~v~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 88 (103)
T 1wf7_A 29 MPLTISSLKDGGKAS------QAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMTLQRAS 88 (103)
T ss_dssp EEEEECCCCTTCHHH------HTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEEECCCS
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 579999999999999 999999999999999887664 4433333334556788888754
No 127
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.49 E-value=3.2e-07 Score=64.63 Aligned_cols=74 Identities=8% Similarity=0.100 Sum_probs=52.5
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~ 141 (169)
..+|+++...... .....|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+....
T Consensus 22 ~glG~~~~~~~~~------------~~~~~g~~V~~V~~~spA~------~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (111)
T 2koj_A 22 EGLGFSITSRDVT------------IGGSAPIYVKNILPRGAAI------QDGRLKAGDRLIEVNGVDLAGKSQEEVVSL 83 (111)
T ss_dssp TBTCEEEEECSCS------------SSSSSCEEEEEECSSSHHH------HHCSSCTTCEEEEETTEECTTSCHHHHHHH
T ss_pred CccCEEEEeccCC------------CCCCcCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4588888754211 0223699999999999999 999 999999999999988542 333322
Q ss_pred hc--CCCCeeEEEEEEe
Q psy18070 142 SI--NHPSITCHILLRL 156 (169)
Q Consensus 142 ~~--~~~~~~~~~i~r~ 156 (169)
.. .....+.+.+.|.
T Consensus 84 l~~~~~g~~v~l~v~R~ 100 (111)
T 2koj_A 84 LRSTKMEGTVSLLVFRQ 100 (111)
T ss_dssp HHHCCCSSEEEEEEEEC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 22 2355678888775
No 128
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.49 E-value=5.7e-07 Score=62.86 Aligned_cols=57 Identities=11% Similarity=0.015 Sum_probs=44.1
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ +||++||+|+++|+.++.+. .+...........+.+.+.|.
T Consensus 38 ~~gv~V~~V~~~spA~-------agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-------GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp CCCEEEEEECTTSTTB-------TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCchh-------hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEEC
Confidence 4699999999999998 79999999999999887664 333333334456678888775
No 129
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.48 E-value=3e-08 Score=69.35 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=49.5
Q ss_pred eecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhc
Q psy18070 66 YIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSI 143 (169)
Q Consensus 66 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~ 143 (169)
-+|+++...+.+.... .....|++|..|.++|||+ ++||++||+|+++|+..+. +..+......
T Consensus 28 ~~G~~l~~~~~~~~~~--------~~~~~~~~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 28 TFGFEIQSYRPQNQNA--------CSSEMFTLICKIQEDSPAH------CAGLQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCSEEEEECCCCCCSS--------SCCSCCEEEEEECTTSHHH------HHTCCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred CccEEEEeeecccCCc--------ccCCCCeEEEEECCCChHH------HcCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 4699988754321110 1234699999999999999 9999999999999998876 4444443332
Q ss_pred CCCCeeEEE
Q psy18070 144 NHPSITCHI 152 (169)
Q Consensus 144 ~~~~~~~~~ 152 (169)
..+..+.+.
T Consensus 94 ~~~~~v~l~ 102 (104)
T 2z17_A 94 SSGNLLTIE 102 (104)
T ss_dssp HTTTEEEEE
T ss_pred hCCCcEEEE
Confidence 334444443
No 130
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.48 E-value=1.4e-07 Score=68.08 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=45.0
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+........+..+.+.+.|.
T Consensus 51 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 110 (124)
T 2daz_A 51 MSIFVVGINPEGPAA------ADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRN 110 (124)
T ss_dssp CCEEEEEECTTSHHH------HHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 599999999999999 999 99999999999888754 4444333334455778888875
No 131
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.48 E-value=4.4e-07 Score=65.42 Aligned_cols=56 Identities=11% Similarity=-0.047 Sum_probs=43.1
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r 155 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+........+..+.+.+.|
T Consensus 45 ~~~~V~~v~~gspA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAA------LDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 689999999999999 999 99999999999998763 333333333344556777776
No 132
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.48 E-value=6.9e-08 Score=67.16 Aligned_cols=57 Identities=19% Similarity=0.082 Sum_probs=43.4
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+ ..+...........+.+.+.|.
T Consensus 36 ~~~~V~~V~~~spA~------~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 94 (100)
T 1whd_A 36 SPVRVQAVDSGGPAE------RAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRV 94 (100)
T ss_dssp SSCBCCBCCTTSHHH------HHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 689999999999999 99999999999999988774 2333322222344577777774
No 133
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.47 E-value=3e-07 Score=66.19 Aligned_cols=57 Identities=9% Similarity=0.098 Sum_probs=43.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+.++.+. .+...... +....+.+.+.|.
T Consensus 58 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 58 APIYVKNILPRGAAI------QDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp CCEEEEEECTTSHHH------HHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 689999999999999 999 999999999999888662 33322222 2245667777764
No 134
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.47 E-value=1.4e-07 Score=66.58 Aligned_cols=59 Identities=15% Similarity=0.089 Sum_probs=45.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcC---CCCeeEEEEEEeeE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSIN---HPSITCHILLRLYL 158 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~---~~~~~~~~i~r~~~ 158 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+....... ++..+.+.+.|..-
T Consensus 33 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVA------ADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCEEEEEECCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 699999999999999 999 99999999999988766 3333322211 24567888888643
No 135
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=1.2e-07 Score=65.99 Aligned_cols=57 Identities=11% Similarity=0.012 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 38 ~~v~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 97 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQ------RCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRP 97 (104)
T ss_dssp CCCEEEEECTTCHHH------HHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 689999999999999 999 999999999999887663 333322222355667887775
No 136
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=67.32 Aligned_cols=58 Identities=12% Similarity=0.063 Sum_probs=45.3
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|.-
T Consensus 43 ~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 103 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAA------RDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDE 103 (116)
T ss_dssp SSEECCCCCSSSHHH------HHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCS
T ss_pred CCEEEEEECCCChHH------hCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 599999999999999 999 99999999999998866 33433333334466788887753
No 137
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.46 E-value=3.5e-08 Score=69.17 Aligned_cols=56 Identities=13% Similarity=0.036 Sum_probs=42.0
Q ss_pred CcEEEEEEccCCcccccccccccC--CCCCcEEEecCceeecch--hhhhhhhcCCC----CeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG--IKPTSSRLLGECLAQYTT--SKLVVWSINHP----SITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG--L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~----~~~~~~i~r 155 (169)
.|++|..|.++|||+ ++| |++||+|+++|+..+.+. .+......... ..+.+.+.|
T Consensus 43 ~~~~V~~V~~~spA~------~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 43 MPVIVSRVAPGTPAD------LCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp EEEEEEEECTTSHHH------HSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred CCeEEEEECCCCchH------HcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 589999999999999 999 999999999999887643 33332222222 266777766
No 138
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=2.3e-07 Score=66.33 Aligned_cols=57 Identities=9% Similarity=-0.023 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 49 ~g~~V~~v~~~s~A~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 108 (117)
T 1ujd_A 49 IGAYIAKILPGGSAE------QTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLD 108 (117)
T ss_dssp EEEEEEEECTTCHHH------HHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESS
T ss_pred cCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEEC
Confidence 589999999999999 999 999999999999988653 333333334455678888775
No 139
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.84 E-value=2e-08 Score=71.77 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=31.9
Q ss_pred CcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceeecc
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQYT 134 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~~~ 134 (169)
.|++|.+|.++|||+ + +||++||+|+++|+.++.+
T Consensus 53 ~gv~V~~V~~~spA~------~~aGL~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 53 VPILISEIHPGQPAD------RCGGLHVGDAILAVNGVNLRD 88 (112)
Confidence 589999999999999 9 9999999999999887743
No 140
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.46 E-value=1.5e-07 Score=67.88 Aligned_cols=59 Identities=14% Similarity=-0.058 Sum_probs=46.0
Q ss_pred CCcEEEEEEcc--CCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEee
Q psy18070 93 THGVLIWRVMY--NSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 93 ~~Gv~V~~V~~--~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
..|++|..|.+ +|||+ ++||++||+|+++|+..+.+. .++..........+.+.+.|.-
T Consensus 43 ~~gv~V~~V~~~~~spA~------~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g 105 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNN------RNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDP 105 (118)
T ss_dssp CCEEEEEECCTTTSCTTH------HHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECS
T ss_pred CCcEEEEEecCCCCChHH------HcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECC
Confidence 37999999999 99999 999999999999998877665 4544333333556688887753
No 141
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.45 E-value=2.2e-07 Score=64.97 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++ ||++||+|+++|+..+.+ ..+........+..+.+.+.|.+
T Consensus 35 ~~~~V~~V~~~s~A~------~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 95 (103)
T 2dc2_A 35 VPILISEIHPGQPAD------RCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVA 95 (103)
T ss_dssp EEEEEEEECTTSHHH------HHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecC
Confidence 589999999999999 94 999999999999998854 34433333344567788888765
No 142
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.45 E-value=1.4e-07 Score=68.40 Aligned_cols=58 Identities=12% Similarity=-0.027 Sum_probs=45.6
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec---chhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY---TTSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~---~~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.-
T Consensus 54 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~ 115 (128)
T 2db5_A 54 VDIFVKDVQPGSVAD------RDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREP 115 (128)
T ss_dssp EEEEEECCCTTSHHH------HTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCC
Confidence 599999999999999 999 9999999999988875 444443333334567788888863
No 143
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.45 E-value=2.1e-07 Score=67.46 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=54.9
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~ 141 (169)
..+|+++........ + ....|++|..|.++|||+ ++| |++||+|+++|+..+.+ ..+....
T Consensus 27 ~~lG~~i~~~~~~~~--~--------~~~~gv~V~~V~~~spA~------~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH--T--------GEASGIYVKSVIPGSAAY------HNGHIQVNDKIVAVDGVNIQGFANHDVVEV 90 (129)
T ss_dssp CCCCEEEEEECCCSS--S--------CCCCEEEEEEECTTSHHH------HHTCCCSSCBEEEETTBCCTTCCHHHHHHH
T ss_pred CCcCEEEEeecCCcc--c--------CCCCCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 458888876432110 0 234799999999999999 999 99999999999888766 4443333
Q ss_pred hcCCCCeeEEEEEEee
Q psy18070 142 SINHPSITCHILLRLY 157 (169)
Q Consensus 142 ~~~~~~~~~~~i~r~~ 157 (169)
.......+.+.+.|.-
T Consensus 91 l~~~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 91 LRNAGQVVHLTLVRRK 106 (129)
T ss_dssp HHHCCSSEEEEEEEES
T ss_pred HHcCCCeEEEEEEeCC
Confidence 2235567788888853
No 144
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.45 E-value=5.3e-07 Score=63.56 Aligned_cols=70 Identities=11% Similarity=-0.003 Sum_probs=52.2
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCC-CCCcEEEecCceeecc--hhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGI-KPTSSRLLGECLAQYT--TSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL-~~GDvI~~~~~v~~~~--~~~~~~~ 141 (169)
..+|+++..-. ...|++|.+|.++|||+ ++|| ++||+|+++|+..+.+ ..+....
T Consensus 13 ~glG~~~~~~~----------------~~~~~~V~~v~~~spA~------~aGll~~GD~I~~ing~~v~~~~~~~~~~~ 70 (112)
T 1qau_A 13 GGLGFLVKERV----------------SKPPVIISDLIRGGAAE------QSGLIQAGDIILAVNDRPLVDLSYDSALEV 70 (112)
T ss_dssp TBTSEEEEECS----------------SSSCEEEEEECTTSHHH------HHTCCCTTCEEEEETTEECTTSCHHHHHHH
T ss_pred CceeEEEEecC----------------CCCCEEEEEeCCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45898887532 12589999999999999 9998 9999999999988776 4443332
Q ss_pred hc-CCCCeeEEEEEEe
Q psy18070 142 SI-NHPSITCHILLRL 156 (169)
Q Consensus 142 ~~-~~~~~~~~~i~r~ 156 (169)
.. .....+.+.+.|.
T Consensus 71 l~~~~g~~v~l~v~R~ 86 (112)
T 1qau_A 71 LRGIASETHVVLILRG 86 (112)
T ss_dssp HHHSCSSSEEEEEEEC
T ss_pred HHhCCCCcEEEEEEeC
Confidence 22 3345678888885
No 145
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.44 E-value=4e-07 Score=65.64 Aligned_cols=57 Identities=16% Similarity=0.089 Sum_probs=43.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCC-eeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPS-ITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~-~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+ ..++.......++ .+.+.+.|.
T Consensus 33 ~gv~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAE------ASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (128)
T ss_dssp CSEEEEEECTTSHHH------HHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHH
T ss_pred CCEEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeC
Confidence 599999999999999 99999999999999988776 4444433333333 445666663
No 146
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.43 E-value=2.4e-07 Score=66.75 Aligned_cols=57 Identities=7% Similarity=-0.140 Sum_probs=44.6
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++ ||++||+|+++|+..+.. ..+...........+.+.+.|.
T Consensus 53 ~~~~V~~V~~~spA~------~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 112 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAA------QTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAG 112 (120)
T ss_dssp EEEEEEEECTTSHHH------HHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 589999999999999 98 999999999999988765 3333333333455678888875
No 147
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=2.5e-07 Score=63.54 Aligned_cols=55 Identities=15% Similarity=0.062 Sum_probs=40.2
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r 155 (169)
.| +|.+|.++|||+ ++||++||+|+++|+..+. +..+...........+.+.+++
T Consensus 32 ~G-~V~~V~~~spA~------~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 32 NG-IICSLMRGGIAE------RGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp TT-EEEEECTTSHHH------HHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred CC-EEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 36 899999999999 9999999999999999884 3334333322334455665553
No 148
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.42 E-value=5.7e-07 Score=69.47 Aligned_cols=57 Identities=7% Similarity=-0.194 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 136 ~gv~V~~V~~gs~A~------~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~ 195 (206)
T 3r0h_A 136 IGCTIADLIQGQYPE------IDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRP 195 (206)
T ss_dssp SCEEEEEECTTSCHH------HHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred ceEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 689999999999999 999 999999999999988743 443333344456678888774
No 149
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.42 E-value=4.1e-07 Score=69.25 Aligned_cols=58 Identities=9% Similarity=0.062 Sum_probs=46.4
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+.++.+ ..+...........+.+.+.|.
T Consensus 129 ~~gv~V~~V~~gs~A~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 189 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAH------KDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKP 189 (196)
T ss_dssp BCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHH------hcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCC
Confidence 3699999999999999 999 99999999999998866 4554444444556667877774
No 150
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.42 E-value=2.5e-07 Score=62.74 Aligned_cols=57 Identities=12% Similarity=-0.072 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhh--hhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLV--VWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~--~~~~~~~~~~~~~i~r~ 156 (169)
.|+.|..+.|+|||+ ++||++||+|+++|+.++.+..++. +........+.+.+.|+
T Consensus 19 ~G~~V~~~~~~s~A~------~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~ 77 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFE------SIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERD 77 (87)
T ss_dssp EEEEEEECSCHHHHH------HTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEET
T ss_pred EEEEEEeCCCCCHHH------HCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 589999999999999 9999999999999998877665544 22233455678888885
No 151
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.42 E-value=2.8e-07 Score=65.23 Aligned_cols=54 Identities=11% Similarity=-0.024 Sum_probs=39.4
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec----chhhhhhhhc-CCCCeeEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY----TTSKLVVWSI-NHPSITCHIL 153 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~----~~~~~~~~~~-~~~~~~~~~i 153 (169)
.+++|.+|.++|||+ +|||++||+|+++|+.++. ++....+... ++...+.+++
T Consensus 39 ~~~~I~~V~~gSpA~------~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV 97 (101)
T 3qik_A 39 KAVVVKSVQRGSLAE------VAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV 97 (101)
T ss_dssp TEEEEEEECTTSHHH------HHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEECCCCHHH------HcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEE
Confidence 589999999999999 9999999999999998752 2333233322 3455555544
No 152
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=2e-07 Score=66.69 Aligned_cols=58 Identities=12% Similarity=-0.013 Sum_probs=45.6
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceee--cchhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQ--YTTSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~--~~~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+ .+..+...........+.+.+.|..
T Consensus 42 ~~~~V~~V~~~spA~------~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 102 (117)
T 1v62_A 42 SVITIDRIKPASVVD------RSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVP 102 (117)
T ss_dssp CEEEEEECCTTSHHH------HHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBT
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECC
Confidence 359999999999999 999 999999999999988 4444444333345667788888754
No 153
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.41 E-value=8.2e-07 Score=59.91 Aligned_cols=55 Identities=15% Similarity=0.087 Sum_probs=39.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|..| ++|||+ +||++||+|+++|+.++.+. .+...... .....+.+.+.|.
T Consensus 27 ~~~~v~~v-~~spA~-------aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-------RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQ 85 (88)
T ss_dssp SSEEEEEC-CC--CC-------TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEE
T ss_pred CcEEEEEe-cCChhH-------hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeC
Confidence 68999888 899998 79999999999999888764 33332222 2345667887774
No 154
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.40 E-value=5.2e-07 Score=65.94 Aligned_cols=57 Identities=14% Similarity=0.061 Sum_probs=44.0
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhh--hhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLV--VWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~--~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++| |++||+|+++|+..+.+. .+.. +........+.+.+.|.
T Consensus 65 ~gv~V~~V~~gspA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 65 LCAFITKVKKGSLAD------TVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp EEEEEEEECTTSHHH------HTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 599999999999999 999 999999999999988642 3332 22222346678888875
No 155
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.40 E-value=2.2e-07 Score=71.77 Aligned_cols=57 Identities=4% Similarity=-0.200 Sum_probs=46.3
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++ ||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 33 ~~~~V~~v~~~spA~------~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 92 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAA------RSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYE 92 (200)
T ss_dssp SCSEEEEECTTSHHH------HTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCeEEEEECCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEecc
Confidence 689999999999999 99 9999999999999888766 555544444456678888774
No 156
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.40 E-value=2.9e-07 Score=63.69 Aligned_cols=55 Identities=13% Similarity=-0.002 Sum_probs=42.5
Q ss_pred EEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc--CCCCeeEEEEEEe
Q psy18070 96 VLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 96 v~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.+|.+|.++|||+ ++||++||+|+++++..+.+-.++..... .....+.+.+.|.
T Consensus 4 p~V~~V~~~spA~------~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~ 60 (95)
T 3id1_A 4 PVVGEIAANSIAA------EAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPF 60 (95)
T ss_dssp CBEEEECTTSHHH------HTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECT
T ss_pred CEEEeeCCCCHHH------HcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEEC
Confidence 4789999999999 99999999999999888776655443322 2225678888875
No 157
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.2e-07 Score=66.33 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=43.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 32 ~g~~V~~V~~~spA~------~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 90 (106)
T 2eei_A 32 KGVYMTDITPQGVAM------RAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVMFLLVDK 90 (106)
T ss_dssp CSCEECCCCTTSHHH------HHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEEEEECCT
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 699999999999999 999999999999999887642 333322222345667777764
No 158
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=3.4e-07 Score=64.96 Aligned_cols=57 Identities=16% Similarity=0.018 Sum_probs=43.7
Q ss_pred CcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ + +||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 43 ~~~~V~~V~~~spA~------~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 102 (114)
T 1uew_A 43 VPHKIGRIIDGSPAD------RCAKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQ 102 (114)
T ss_dssp CSCEEEEECTTCTTG------GGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCC
T ss_pred cCeEEEEECCCChHH------HhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 378999999999999 9 99999999999999887663 333333223456667887775
No 159
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=98.37 E-value=3.9e-07 Score=70.81 Aligned_cols=48 Identities=23% Similarity=0.405 Sum_probs=40.3
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc----CCeEEEEehhhHHHHH
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT----AGISFAIPIDYAIEFL 49 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~----~~~~faiP~~~i~~~l 49 (169)
++|+++.+++|+|||||++ +|+++||++.... .+.+|++|++.+...+
T Consensus 125 ~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 125 LIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRTGGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred eEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCCCCcEEEEEHHHHHHHC
Confidence 4789999999999999996 8999999997642 3589999988766655
No 160
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=5.6e-07 Score=64.74 Aligned_cols=57 Identities=12% Similarity=-0.036 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhh--hhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLV--VWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~--~~~~~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..++. +........+.+.+.|.
T Consensus 45 ~~~~V~~V~~~spA~------~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 106 (122)
T 1v5q_A 45 SPPLISYIEADSPAE------RCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFD 106 (122)
T ss_dssp SCCEEEEECTTSHHH------HSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEE
T ss_pred CCcEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEEC
Confidence 579999999999999 999 99999999999988865 33333 22222245778888885
No 161
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.34 E-value=6.8e-07 Score=64.97 Aligned_cols=58 Identities=17% Similarity=0.075 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhh--hhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLV--VWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~--~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+.. +........+.+.+.|..
T Consensus 43 ~~v~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAA------LDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECTTSHHH------HHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 589999999999999 999 99999999999998864 22332 222222556788888875
No 162
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=1.5e-07 Score=65.33 Aligned_cols=57 Identities=11% Similarity=0.063 Sum_probs=43.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 36 ~~~~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 95 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAI------RNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRG 95 (103)
T ss_dssp EEEECCCBCTTSHHH------HHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECT
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 589999999999999 999 999999999999887653 333222223345667777774
No 163
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.33 E-value=7.5e-07 Score=68.19 Aligned_cols=58 Identities=16% Similarity=0.027 Sum_probs=45.2
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|..|.++|||+ ++| |++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 110 ~~gi~V~~V~~gspA~------~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAH------RDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 3689999999999999 999 9999999999999873 33444333333556778888773
No 164
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.32 E-value=1.3e-06 Score=66.96 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=44.4
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEE
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLR 155 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r 155 (169)
..|++|.+|.++|||+ + ||++||+|+++|+..+.+. .+...........+.+.+.|
T Consensus 23 ~~g~~V~~v~~~spA~------~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPAS------K-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSEEEEEECTTSTTT------T-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCEEEEEECCCChHH------h-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4799999999999999 9 9999999999999887664 33333333445577888888
No 165
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.32 E-value=1.1e-06 Score=66.72 Aligned_cols=58 Identities=17% Similarity=0.131 Sum_probs=45.8
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.|+|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 34 ~~g~~V~~V~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~ 94 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAA------QDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRR 94 (196)
T ss_dssp CCCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEE
T ss_pred CCCEEEEEECCCChHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 3699999999999999 999 999999999998887643 444444444456678888774
No 166
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=1.1e-07 Score=68.95 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=44.2
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+. +..+...........+.+.+.|.
T Consensus 61 ~gv~V~~V~~~spA~------~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 119 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAF------EAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPK 119 (126)
T ss_dssp CCCCBCCCCSSSHHH------HHTCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEEC
Confidence 689999999999999 9999999999999998876 44444333333456667777664
No 167
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.31 E-value=1.1e-06 Score=79.11 Aligned_cols=57 Identities=16% Similarity=0.152 Sum_probs=44.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec-chhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY-TTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~-~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ +|||++||+|+++|+.++. .+....+...+.+..+.+.+.|+
T Consensus 496 ~gv~V~~V~~~spA~------~AGL~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 496 QGLDVLNVYHDESAY------HAGLSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp TEEEEEEECTTSHHH------HHTCCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEEET
T ss_pred CeEEEEEeCCCChHH------HCCCCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 589999999999999 9999999999999998873 23333333334556778999885
No 168
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.31 E-value=3.5e-07 Score=65.35 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=42.3
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCC-CCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINH-PSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~-~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+........ ...+.+.+.|+
T Consensus 42 ~gv~V~~V~~~spA~------~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 102 (119)
T 1x6d_A 42 KVITVHRVFPNGLAS------QEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK 102 (119)
T ss_dssp SSCEEEEECSSSHHH------HHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 699999999999999 999 99999999999988764 33333332223 33445666664
No 169
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=3.4e-07 Score=64.52 Aligned_cols=57 Identities=9% Similarity=0.043 Sum_probs=44.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|..|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|+
T Consensus 39 ~gv~V~~V~~~s~A~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 98 (113)
T 1um7_A 39 EGIFVSFILAGGPAD------LSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSVTIVAQYR 98 (113)
T ss_dssp CCCBCCCBCSSSHHH------HTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC
Confidence 689999999999999 999 999999999998887664 343333334455667777764
No 170
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.31 E-value=1.5e-06 Score=63.28 Aligned_cols=57 Identities=11% Similarity=-0.036 Sum_probs=43.0
Q ss_pred CcEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecch--hhhhhhhcCC-CCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTT--SKLVVWSINH-PSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~--~~~~~~~~~~-~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++ ||++||+|+++|+..+... .+........ ...+.+.+.|.
T Consensus 57 ~~i~I~~V~~gs~A~------~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~ 117 (130)
T 1i16_A 57 KPLTINRIFKGAASE------QSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRK 117 (130)
T ss_dssp CCCEEEEECSSCCCS------SSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeC
Confidence 589999999999999 99 9999999999998877653 3333222233 34567777775
No 171
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=98.30 E-value=2.6e-07 Score=72.97 Aligned_cols=37 Identities=24% Similarity=0.486 Sum_probs=28.8
Q ss_pred CEeecccc---CCCCccceEEcCCccEEEEEeeeccCCeE
Q psy18070 1 MSLTGIMV---KFGNSGGPLVNLDGEVIGINSMKVTAGIS 37 (169)
Q Consensus 1 ~iq~da~i---n~GnSGGplvn~~G~vvGi~~~~~~~~~~ 37 (169)
+|+.|.++ |||+|||||+|.+|+||||.++.-..+.+
T Consensus 112 ~i~~~~al~~T~pGdSGsPVvn~dG~VIGVHt~s~~~g~g 151 (213)
T 3fan_A 112 VIGNGFAFCFTACGDSGSPVITEAGELVGVHTGSNKQGGG 151 (213)
T ss_dssp EEETTEEEESSCCCSTTCEEEETTSCEEEEEEC-----CC
T ss_pred ccccCCEEEecCCCCCCCccCCCCCcEEEEEeccCCccce
Confidence 46788888 99999999999999999999987765544
No 172
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.30 E-value=6.1e-07 Score=63.15 Aligned_cols=58 Identities=10% Similarity=0.017 Sum_probs=43.3
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcC-CCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSIN-HPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~-~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.. ..+....... ....+.+.+.|.
T Consensus 43 ~~g~~V~~v~~~spA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAE------RSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHH------HHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 3689999999999999 999 99999999999888754 2333332223 234667777764
No 173
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=3.4e-07 Score=65.43 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=43.7
Q ss_pred CcEEEEEEccCCccccccccccc--CCCCCcEEEecCceeecch--hhhhhhhcCC----CCeeEEEEEEeeE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSA--GIKPTSSRLLGECLAQYTT--SKLVVWSINH----PSITCHILLRLYL 158 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~a--GL~~GDvI~~~~~v~~~~~--~~~~~~~~~~----~~~~~~~i~r~~~ 158 (169)
.|++|.+|.++|||+ ++ ||++||+|+++|+..+.+. .+........ ...+.+.+.|.-.
T Consensus 41 ~~v~V~~V~~~spA~------~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPAD------LCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTT------SSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHH------HhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 589999999999999 99 9999999999998877542 3322222222 1367888888644
No 174
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.28 E-value=9.7e-07 Score=62.88 Aligned_cols=57 Identities=14% Similarity=0.062 Sum_probs=43.7
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ +||++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 45 ~~gv~V~~V~~~spA~-------~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 103 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-------GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRP 103 (117)
T ss_dssp CCBCEEEEECTTSSHH-------HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCccc-------ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEEC
Confidence 4689999999999998 89999999999998877653 333333333456778888875
No 175
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.28 E-value=1e-06 Score=68.00 Aligned_cols=57 Identities=12% Similarity=-0.076 Sum_probs=45.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc----hhhhhhhhcCCCCe-eEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT----TSKLVVWSINHPSI-TCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~----~~~~~~~~~~~~~~-~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+........... +.+.++|.
T Consensus 45 ~g~~V~~V~~~spA~------~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 107 (206)
T 3r0h_A 45 TGCVITHVYPEGQVA------ADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRA 107 (206)
T ss_dssp SCEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECC
T ss_pred CCeEEEEECCCChHH------hcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEec
Confidence 599999999999999 998 99999999999998776 44444444444455 78888874
No 176
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=4.5e-07 Score=62.58 Aligned_cols=57 Identities=11% Similarity=-0.074 Sum_probs=43.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ +||++||+|+++|+..+.+ ..+...........+.+.+.|.-
T Consensus 31 ~~~~V~~V~~~spA~-------agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-------GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-------TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-------hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 689999999999997 8999999999999888765 33333332334567788888864
No 177
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.27 E-value=8.3e-07 Score=68.45 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+.++.+ ..++..........+.+.+.|.
T Consensus 135 ~gv~V~~V~~~s~A~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 194 (196)
T 1p1d_A 135 DPLVISDIKKGSVAH------RTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKD 194 (196)
T ss_dssp CCCEEEECCSSSHHH------HTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCEEEEEECCCCcHH------hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeC
Confidence 699999999999999 999 99999999999998776 4444333223366677877774
No 178
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.25 E-value=2.1e-06 Score=58.25 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=40.8
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch-hhhhhhhc-CCCCeeEEEEEEee
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT-SKLVVWSI-NHPSITCHILLRLY 157 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~-~~~~~~~~-~~~~~~~~~i~r~~ 157 (169)
|. |.+|.++|||+ ++||++||.|+++|+..+... .+.++..+ +....+.++++..|
T Consensus 25 g~-I~~v~~gspA~------~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p~~ 82 (82)
T 1r6j_A 25 GK-ITSIVKDSSAA------RNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMPAF 82 (82)
T ss_dssp TE-EEEECTTSHHH------HHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CE-EEEecCCCHHH------HcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEeCC
Confidence 54 78999999999 999999999999999987443 23333333 44556677776543
No 179
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.25 E-value=1.5e-06 Score=67.15 Aligned_cols=58 Identities=12% Similarity=0.104 Sum_probs=46.3
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEeeE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRLYL 158 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~~~ 158 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+.+ ..+... .+.....+.+.+.|.-.
T Consensus 110 ~~~~V~~V~~gspA~------~aGL~~GD~Il~vng~~v~~~~~~~~~~-~l~~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQAD------SVGLQVGDEIVRINGYSISSCTHEEVIN-LIRTEKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHH------HTTCCTTEEEEEETTEECTTCCHHHHHH-HHTSSSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHH-HHcCCCeEEEEEEECCc
Confidence 589999999999999 99999999999999998866 433333 33446777888888643
No 180
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.24 E-value=8.6e-07 Score=60.09 Aligned_cols=56 Identities=16% Similarity=0.033 Sum_probs=42.9
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc-CCCCeeEEEEEEe
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI-NHPSITCHILLRL 156 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~-~~~~~~~~~i~r~ 156 (169)
.++|.+|.++|||+ ++||++||+|+++|+.++.+..++..... .....+.+.+.|+
T Consensus 5 ~~~V~~v~~~spA~------~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~ 61 (91)
T 2zpm_A 5 EPVLENVQPNSAAS------XAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQ 61 (91)
T ss_dssp -CBCSEECTTSHHH------HTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEET
T ss_pred CeEEEEECCCChHH------hcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEEC
Confidence 47889999999999 99999999999999988776655543322 2344667888774
No 181
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.24 E-value=3.9e-07 Score=79.42 Aligned_cols=57 Identities=19% Similarity=0.135 Sum_probs=47.4
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+..++.......+..+.+.+.|.
T Consensus 386 ~Gv~V~~V~~gspA~------~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~~~~~v~l~v~R~ 442 (451)
T 3pv2_A 386 IGVQVVGASENSAGW------RAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRG 442 (451)
T ss_dssp EEEEEEEECTTSHHH------HHTCCTTCEEEEETTEECCSHHHHHHHTTSSCSCEEEEEEET
T ss_pred CceEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCHHHHHHHHhcCCCeEEEEEEEC
Confidence 699999999999999 999999999999999988776665544444566778888885
No 182
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.24 E-value=1.2e-06 Score=68.61 Aligned_cols=60 Identities=18% Similarity=0.086 Sum_probs=46.6
Q ss_pred CCCCcEEEEEEccCCcccccccccccCCCCC-cEEEecCceeecchh--hhhhhhcCCCCeeEEEEEEe
Q psy18070 91 DLTHGVLIWRVMYNSPAYFIKFRTSAGIKPT-SSRLLGECLAQYTTS--KLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 91 ~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~G-DvI~~~~~v~~~~~~--~~~~~~~~~~~~~~~~i~r~ 156 (169)
....|++|.+|.++|||+ +|||++| |+|+++|+.++.+.. ...+........+.+.++|.
T Consensus 13 ~~~~G~~V~~V~~~SpA~------~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 13 GGTEGYHVLRVQENSPGH------RAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp SSSEEEEEEEECTTSHHH------HTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEET
T ss_pred CCCCEEEEEEECCCCHHH------HCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEec
Confidence 345799999999999999 9999999 999999888766543 33344444456778888873
No 183
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.23 E-value=6.7e-07 Score=64.95 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=44.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhc-------CCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSI-------NHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~-------~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+... .+...... .....+.+.++|..
T Consensus 55 ~gi~V~~V~~gspA~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAF------KDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp EEEEEEECCSSSSTH------HHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred CCEEEEEECCCCHHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 589999999999999 999 999999999999887553 23322222 12567788888853
No 184
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.22 E-value=3e-06 Score=61.64 Aligned_cols=57 Identities=14% Similarity=-0.025 Sum_probs=44.2
Q ss_pred CCcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhc--CCCCeeEEEEEEee
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSI--NHPSITCHILLRLY 157 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~--~~~~~~~~~i~r~~ 157 (169)
..|++|.+|.++|||+ ++ |++||+|+++++.++.+..++..... .....+.+.+ |.-
T Consensus 24 ~~gv~V~~V~~~spA~------~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g 82 (125)
T 2hga_A 24 PDGVQIDSVVPGSPAS------KV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQG 82 (125)
T ss_dssp CCCEEEEEECSSSGGG------GT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTE
T ss_pred CCceEEEEECCCChHH------Hh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECC
Confidence 3699999999999999 99 99999999999988877655543332 3345667777 643
No 185
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.22 E-value=5.7e-07 Score=64.09 Aligned_cols=57 Identities=14% Similarity=-0.038 Sum_probs=42.9
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCC-CCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINH-PSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~-~~~~~~~i~r~ 156 (169)
.+++|..|.++|||+ ++||++||+|+++|+..+. +..++....... ...+.+.+.|.
T Consensus 36 ~~v~V~~V~~~spA~------~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 36 TPVQVHFLDPHCSAS------LAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp SSCEECCCCTTSSHH------HHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECE
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEec
Confidence 478999999999999 9999999999999998877 444444332222 33467777664
No 186
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.19 E-value=7.3e-07 Score=64.33 Aligned_cols=70 Identities=11% Similarity=0.012 Sum_probs=52.3
Q ss_pred ceecEEEEECCHHHHHHhhcccCCCCCCCCcEEEEEEccCCcccccccccccCC-CCCcEEEecCceeecc--hhhhhhh
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRHIPYDLTHGVLIWRVMYNSPAYFIKFRTSAGI-KPTSSRLLGECLAQYT--TSKLVVW 141 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL-~~GDvI~~~~~v~~~~--~~~~~~~ 141 (169)
..+|+++.... ...|++|.+|.++|||+ ++|| ++||+|+++|+..+.+ ..++...
T Consensus 20 ~glG~~~~~~~----------------~~~~~~V~~V~~~spA~------~aGll~~GD~I~~ing~~v~~~~~~~~~~~ 77 (127)
T 1b8q_A 20 GGLGFLVKERV----------------SKPPVIISDLIRGGAAE------QSGLIQAGDIILAVNDRPLVDLSYDSALEV 77 (127)
T ss_dssp SCCSCCEEECT----------------TSSCEEECCCSSSSSHH------HHSSCCTTTCCCEETTEECSSSCHHHHHHH
T ss_pred CcEeEEEEecC----------------CCCCEEEEEeCCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45788876532 12589999999999999 9999 9999999999988776 4444433
Q ss_pred hcC-CCCeeEEEEEEe
Q psy18070 142 SIN-HPSITCHILLRL 156 (169)
Q Consensus 142 ~~~-~~~~~~~~i~r~ 156 (169)
... ....+.+.+.|.
T Consensus 78 l~~~~g~~v~l~v~R~ 93 (127)
T 1b8q_A 78 LRGIASETHVVLILRG 93 (127)
T ss_dssp HHSCCSSCEEEEEECC
T ss_pred HHhCCCCeEEEEEEeC
Confidence 333 345678888885
No 187
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.18 E-value=3.3e-06 Score=72.43 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=44.8
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|.+|.+||||+ ++||++||+|+++|+..+.+ ..+...... .....+.+.+.|.
T Consensus 31 ~gi~V~~V~~gspA~------~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAA------KEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp TEEEEEEECTTCHHH------HTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeC
Confidence 699999999999999 99999999999999998865 333333322 3455678888875
No 188
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=9e-06 Score=56.03 Aligned_cols=55 Identities=13% Similarity=-0.069 Sum_probs=40.2
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|.+|.+ +|+ ++||++||+|+++|+..+.+. .+...... +....+.+.+.|.
T Consensus 32 ~Gv~V~~v~~--~a~------~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 90 (96)
T 1ujv_A 32 TGQRVKQILD--IQG------CPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 90 (96)
T ss_dssp TEEEEEEESC--GGG------STTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECC
T ss_pred CCEEEEEEec--ccc------cCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 4899999987 377 899999999999999887653 33322222 2356778888775
No 189
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.14 E-value=2.8e-06 Score=60.05 Aligned_cols=57 Identities=16% Similarity=0.054 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhh-hcCC---CCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVW-SINH---PSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~-~~~~---~~~~~~~i~r~ 156 (169)
.+++|.+|.++|||+ ++| |++||.|+++|+..... ..+.... .... ...+.+.+.|.
T Consensus 41 ~~~~V~~v~~~s~A~------~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCY------KDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRS 104 (109)
T ss_dssp SSEEEEEECTTSHHH------HHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECC
T ss_pred CCEEEEEeCCCChHH------HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeC
Confidence 489999999999999 999 99999999998887654 2222221 1122 34557777664
No 190
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.12 E-value=4.3e-06 Score=72.42 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=47.7
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+.++.+..++......++..+.+.+.|.
T Consensus 363 ~gv~V~~V~~~spA~------~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~~~v~l~v~R~ 419 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAA------QAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRG 419 (436)
T ss_pred CCEEEEEeCCCCHHH------HcCCCCCCEEEEECCEECCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 699999999999999 999999999999999988776665554444566778888885
No 191
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.11 E-value=5e-06 Score=64.05 Aligned_cols=58 Identities=19% Similarity=0.086 Sum_probs=47.1
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeec--chhhhhhhhcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQY--TTSKLVVWSINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+. +..++..........+.+.+.|.=
T Consensus 135 ~g~~V~~v~~~s~A~------~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 135 RPVVITCVRPGGPAD------REGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDV 195 (200)
T ss_dssp EEEEEEEECTTSHHH------HHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred CCEEEEEECCCChHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 699999999999999 999 9999999999999887 655555444445567788888753
No 192
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.07 E-value=3.8e-06 Score=64.72 Aligned_cols=58 Identities=12% Similarity=-0.055 Sum_probs=43.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCC--CCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINH--PSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~--~~~~~~~i~r~~ 157 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..++....... ...+.+.+.|.-
T Consensus 36 ~~~~V~~v~~~spA~------~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 36 SPPLISYIEADSPAE------RCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDV 98 (196)
T ss_dssp CSEEEEECCTTSHHH------HTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECS
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecC
Confidence 689999999999999 999 99999999999888773 23333222222 456688887753
No 193
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=98.04 E-value=3.2e-06 Score=64.94 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=29.1
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT 33 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~ 33 (169)
++++|+.+.+|+|||||+|.+|+||||++....
T Consensus 142 ~~~~~~~~~~GdSGGPl~~~~g~lvGI~s~g~~ 174 (200)
T 2w7s_A 142 FMEFDAYAQPGNSGSPVLNSKHELIGILYAGSG 174 (200)
T ss_dssp EEEECSCCCTTCTTCEEECTTSCEEEEEEEEC-
T ss_pred EEEEcceeCCCCccCeEECcCCEEEEEEecccc
Confidence 468899999999999999999999999997643
No 194
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.04 E-value=7.4e-06 Score=71.93 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=45.1
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhc--CCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~--~~~~~~~~~i~r~ 156 (169)
.|++|.+|.+||||+ ++||++||+|+++|+..+.+ ..+...... .....+.+.+.|+
T Consensus 23 ~Gi~V~~V~~gspA~------~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~ 83 (468)
T 3shw_A 23 VGIFVAGVLEDSPAA------KEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 83 (468)
T ss_dssp TEEEEEEECSSSHHH------HTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 699999999999999 99999999999999998866 333333322 2456778888883
No 195
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=98.00 E-value=3.7e-06 Score=64.87 Aligned_cols=30 Identities=30% Similarity=0.271 Sum_probs=27.2
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeee
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
|+|+|++++||+|||||++. +++|||++..
T Consensus 131 ~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~ 160 (187)
T 1hpg_A 131 MVRTTACSAGGDSGGAHFAG-SVALGIHSGS 160 (187)
T ss_dssp EEEECCCCCTTCTTCEEEET-TEEEEEEEEE
T ss_pred eEEeccccCCCCCCCeEEEC-CEEEEEEEee
Confidence 58999999999999999987 5999998864
No 196
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=97.99 E-value=1.3e-06 Score=69.75 Aligned_cols=40 Identities=40% Similarity=0.483 Sum_probs=33.2
Q ss_pred EeeccccCCCCccceEEcCCccEEEEEeeeccCCeEEEEehhh
Q psy18070 2 SLTGIMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPIDY 44 (169)
Q Consensus 2 iq~da~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~~~ 44 (169)
+++++.+.+|+|||||+|.+|+||||++.... +|++|++.
T Consensus 175 ~~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~---~~~ipi~~ 214 (246)
T 1qtf_A 175 SQYFGYTEVGNSGSGIFNLKGELIGIHSGKGG---QHNLPIGV 214 (246)
T ss_dssp SBEESCCCGGGTTCEEECTTCCEEEEEEEEET---TTTEEEEE
T ss_pred EEEeCCCCCCCchhheECCCCEEEEEEecccc---Cccccchh
Confidence 36788899999999999999999999998753 46777654
No 197
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.97 E-value=5.6e-06 Score=59.21 Aligned_cols=56 Identities=7% Similarity=-0.078 Sum_probs=41.7
Q ss_pred cEEEEEEccCCccccccccccc-CCCCCcEEEecCceeecch--hhh--hhhhc--CCCCeeEEEEEEe
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSA-GIKPTSSRLLGECLAQYTT--SKL--VVWSI--NHPSITCHILLRL 156 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~a-GL~~GDvI~~~~~v~~~~~--~~~--~~~~~--~~~~~~~~~i~r~ 156 (169)
.++|.+|.++|||+ ++ ||++||.|+++|+..+... .+. .+... .....+.+.+.|.
T Consensus 44 ~i~I~~V~~gspA~------~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAE------RHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHH------HHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHH------HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 49999999999999 99 9999999999998887652 122 22222 1255678888874
No 198
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.96 E-value=2.2e-05 Score=70.01 Aligned_cols=87 Identities=15% Similarity=0.042 Sum_probs=63.8
Q ss_pred ceecEEEEECCHHHHHHhhcccC------------CCCCCCCcEEEEEEccCCcccccccccccCCCCCcEEEecCceee
Q psy18070 65 KYIGITMLTLNEKLIEQLRRDRH------------IPYDLTHGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQ 132 (169)
Q Consensus 65 ~~lGi~~~~l~~~~~~~~~~~~~------------~~~~~~~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~ 132 (169)
.+.|+.+.+|+++++++++.+.. .......||+|++|.++++|+ .+|+++||+|+++|+.++
T Consensus 374 ~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~------~~g~~~gdiI~~vNg~~V 447 (539)
T 4fln_A 374 IVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNI------GYEDMNNQQVLKFNGIPI 447 (539)
T ss_dssp CSTTEEEEECCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGT------TCSSCCSEEEEEETTEEC
T ss_pred cccceEEeeCCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhh------hcCCCCCCEEEeECCEEc
Confidence 35899999999988776544321 111334699999999999999 999999999999999999
Q ss_pred cchhhhhhhhcC-CCCeeEEEEEEee
Q psy18070 133 YTTSKLVVWSIN-HPSITCHILLRLY 157 (169)
Q Consensus 133 ~~~~~~~~~~~~-~~~~~~~~i~r~~ 157 (169)
.+..++.....+ +...+.+.+.+.+
T Consensus 448 ~s~~~l~~~l~~~k~~~l~~~~~~~~ 473 (539)
T 4fln_A 448 RNIHHLAHLIDMCKDKYLVFEFEDNY 473 (539)
T ss_dssp CSHHHHHHHHHTCCSSEEEEEETTSC
T ss_pred CCHHHHHHHHHHcCCCeEEEEECCCE
Confidence 888777754433 3444455444433
No 199
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=97.92 E-value=1.3e-05 Score=64.95 Aligned_cols=52 Identities=29% Similarity=0.284 Sum_probs=39.8
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--CCeEEEEehhhHHHHHHhhh
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--~~~~faiP~~~i~~~l~~l~ 53 (169)
++++++...+|+|||||++.+|+||||++.... .+.+++++ ..+...+++.+
T Consensus 157 ~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i 210 (268)
T 1wcz_A 157 AMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNI 210 (268)
T ss_dssp EEEESBCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHC
T ss_pred eEEEecccCCCCccCeEEccCCEEEEEEeCCccCCcceeEEcC-HHHHHHHHHHH
Confidence 468899999999999999989999999998764 23567775 44555555444
No 200
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.91 E-value=2.8e-06 Score=67.38 Aligned_cols=56 Identities=18% Similarity=0.116 Sum_probs=41.6
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeec--chhhhhhhhcCCCCee-EEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQY--TTSKLVVWSINHPSIT-CHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~--~~~~~~~~~~~~~~~~-~~~i~r 155 (169)
.|++|..|.++|||+ ++||++||+|+++|+..+. +..++..........+ .+.+.|
T Consensus 33 ~gv~V~~V~~gSpA~------~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~l~V~R 91 (216)
T 2krg_A 33 PGQFIRSVDPDSPAE------ASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR 91 (216)
T ss_dssp CSCBEEEECTTSHHH------HHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEEEECCH
T ss_pred CCeEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEEE
Confidence 599999999999999 9999999999999998877 4444432222224445 555554
No 201
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.90 E-value=7.2e-06 Score=66.97 Aligned_cols=57 Identities=9% Similarity=-0.086 Sum_probs=44.2
Q ss_pred CcEEEEEEccCCcccccccccc-cCCCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTS-AGIKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~-aGL~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ + +||++||+|+++|++.+.+. .+...........+.+.+.|.
T Consensus 103 ~gi~V~~V~~gspA~------~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~ 162 (263)
T 1z87_A 103 MPILISKIFKGLAAD------QTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM 162 (263)
T ss_dssp EEEEEEECCTTSHHH------HCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECC
T ss_pred CCEEEEEECCCCHHH------HhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeC
Confidence 589999999999999 9 79999999999998887663 333333333455678888874
No 202
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=97.90 E-value=1.4e-05 Score=64.92 Aligned_cols=52 Identities=29% Similarity=0.284 Sum_probs=38.9
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--CCeEEEEehhhHHHHHHhhh
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--~~~~faiP~~~i~~~l~~l~ 53 (169)
++++++.+.+|+|||||++.+|+||||++.... .+.++++. ..+...+++.+
T Consensus 157 ~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~i 210 (274)
T 2o8l_A 157 AMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQNI 210 (274)
T ss_dssp EEEESCCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHHC
T ss_pred eEEeCcccCCCCchhheeccCCeEEEEEeCcccCCCCceEEec-HHHHHHHHHHH
Confidence 468899999999999999999999999998764 23566664 33444454443
No 203
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=97.89 E-value=1e-05 Score=63.93 Aligned_cols=33 Identities=36% Similarity=0.390 Sum_probs=29.7
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT 33 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~ 33 (169)
++|+|+.+.+|+|||||+|.+|+||||++....
T Consensus 183 ~~~~~~~~c~GdSGGPl~~~~g~lvGI~s~g~~ 215 (242)
T 1agj_A 183 GLRYYGFTVPGNSGSGIFNSNGELVGIHSSKVS 215 (242)
T ss_dssp SEEEECCCCGGGTTCEEECTTSEEEEEEEEEEE
T ss_pred eEEEeCCcCCCCCchHhcccCCEEEEEEecccc
Confidence 368899999999999999999999999998764
No 204
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.88 E-value=3.3e-05 Score=65.68 Aligned_cols=57 Identities=14% Similarity=0.003 Sum_probs=43.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhh-hcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVW-SINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~-~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++++.++.+. .+.... .......+.+.+.|.
T Consensus 99 ~~~~V~~v~~~spA~------~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAE------KAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 158 (388)
T ss_dssp SCEEEEEECTTSHHH------HTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEET
T ss_pred CcEEEEEeCCCChHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeC
Confidence 689999999999999 999999999999999887763 222222 223344567777764
No 205
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=97.80 E-value=1e-05 Score=61.79 Aligned_cols=32 Identities=28% Similarity=0.444 Sum_probs=29.0
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeec
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
++++++...+|+|||||+|.+|+||||++...
T Consensus 145 ~~~~~~~~~~GdSGGPl~~~~g~lvGI~s~g~ 176 (204)
T 2vid_A 145 SIVYSAHTESGNSGSPVLNSNNELVGIHFASD 176 (204)
T ss_dssp EEEECCCCCGGGTTCEEECTTSCEEEEEEEEC
T ss_pred eEEEecccCCCCccCcEECCCCeEEEEEecCc
Confidence 46788999999999999999999999999765
No 206
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.77 E-value=1.3e-05 Score=55.96 Aligned_cols=35 Identities=17% Similarity=-0.018 Sum_probs=31.4
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT 134 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~ 134 (169)
.+++|..|.++|||+ ++| |++||.|+++|+.....
T Consensus 32 ~~~~I~~v~~~s~A~------~aG~L~~GD~Il~Vng~~v~~ 67 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAH------NCGQLKVGHVILEVNGLTLRG 67 (103)
T ss_dssp SSCEEEEECTTSHHH------HHCSSCTTCBCCEETTEECTT
T ss_pred CcEEEEEeCCCChHH------HCCCCCCCCEEEEECCEECCC
Confidence 356999999999999 999 99999999999988754
No 207
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.77 E-value=3.5e-06 Score=73.36 Aligned_cols=57 Identities=21% Similarity=0.172 Sum_probs=0.0
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++||++||+|+++|+..+.+..++.......+..+.+.+.|.
T Consensus 383 ~gv~V~~V~~gspA~------~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~~v~l~v~R~ 439 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAA------QIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRG 439 (448)
T ss_dssp ---------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHH------HcCCCCCCEEEEECCEECCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 689999999999999 999999999999888777655444433333344667777775
No 208
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.76 E-value=2.8e-05 Score=66.93 Aligned_cols=55 Identities=15% Similarity=-0.057 Sum_probs=40.9
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecchhhhhhhhcCCCCeeEEEEEEe
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTTSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.++|..|.++|||+ +|||++||+|+++++..+.... ...........+.+.+.|.
T Consensus 91 ~~~V~~V~~gsPA~------~AGL~~GD~I~~InG~~v~~~~-~~~~l~~~g~~v~l~v~R~ 145 (403)
T 3k50_A 91 NALISYVVPGSPAE------EAGLQRGHWIMMMNGDYITKKV-ESELLQGSTRQLQIGVYKE 145 (403)
T ss_dssp EEEEEEECTTSHHH------HTTCCTTCEEEEETTBCBCTTT-GGGGTSCSCEEEEEEEEEE
T ss_pred eEEEEEeCCCChHH------HcCCCCCCEEEEECCEEccchh-HHHHhhCCCCEEEEEEEeC
Confidence 48899999999999 9999999999999888766542 2222222344557777775
No 209
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.75 E-value=4.1e-05 Score=70.14 Aligned_cols=57 Identities=14% Similarity=0.097 Sum_probs=43.7
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+ ..+...........+.+.+.|+
T Consensus 331 ~gv~V~~V~~gs~A~------~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~ 390 (721)
T 2xkx_A 331 EGIFISFILAGGPAD------LSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 390 (721)
T ss_pred CCeEEEEeCCCChHH------hcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeC
Confidence 699999999999999 999 99999999999998765 2333333333455567777664
No 210
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=97.68 E-value=2.7e-05 Score=59.13 Aligned_cols=31 Identities=29% Similarity=0.405 Sum_probs=27.1
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeec
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
++|+|+..+||+|||||++.+ ++|||++...
T Consensus 125 ~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~ 155 (181)
T 2sga_A 125 MIQTNVCAQPGDSGGSLFAGS-TALGLTSGGS 155 (181)
T ss_dssp EEEESCCCCTTCTTCEEEETT-EEEEEEEEEE
T ss_pred eEecccccCCCCCCCEEEECC-EEEEEEEeeC
Confidence 368899999999999999876 9999998753
No 211
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.65 E-value=0.00016 Score=51.88 Aligned_cols=56 Identities=9% Similarity=-0.062 Sum_probs=41.2
Q ss_pred CcEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch--hhhhhh--hcCCCCeeEEEEEEee
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT--SKLVVW--SINHPSITCHILLRLY 157 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~--~~~~~~--~~~~~~~~~~~i~r~~ 157 (169)
.|..|..|.+ ||. .+||++||+|+++|+..+.+. .+.... ..+....+.+.+.|.-
T Consensus 34 ~g~~V~~I~~--~~~------~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g 93 (113)
T 3soe_A 34 TGQKVKMILD--SQW------CQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGG 93 (113)
T ss_dssp TEEEEEEESC--GGG------STTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESS
T ss_pred CCcEEEEecC--hHH------hCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 4778999876 688 899999999999999887754 233322 2233557799999964
No 212
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=97.61 E-value=3.2e-05 Score=60.24 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=26.6
Q ss_pred EeeccccCCCCccceEEcCCccEEEEEeeeccCCeEE
Q psy18070 2 SLTGIMVKFGNSGGPLVNLDGEVIGINSMKVTAGISF 38 (169)
Q Consensus 2 iq~da~in~GnSGGplvn~~G~vvGi~~~~~~~~~~f 38 (169)
+|++ +||+||||++|.+ +||||+++..+.+-++
T Consensus 106 l~~t---~PGDSGsPVl~~~-~vIGV~T~s~s~gs~~ 138 (198)
T 1mbm_A 106 LAWT---TSGDSGSAVVQGD-AVVGVHTGSNTSGVAY 138 (198)
T ss_dssp ECCC---CGGGTTCEEEETT-EEEEEEEEEEGGGEEE
T ss_pred eEcC---CCCCCCCccccCC-eEEEEEeccCCCCcee
Confidence 5666 9999999999999 9999999854444443
No 213
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.53 E-value=0.00013 Score=66.80 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=44.5
Q ss_pred CCcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhhhhcCCCCeeEEEEEEe
Q psy18070 93 THGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 93 ~~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~~~~~~~~~~~~~i~r~ 156 (169)
..|++|.+|.++|||+ ++| |++||+|+++|+..+.+. .+...........+.+.+.|.
T Consensus 183 ~~gv~V~~V~~gs~A~------~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~ 243 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAH------KDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKP 243 (721)
T ss_pred CCceEEEEeCCCCchh------hcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 3699999999999999 999 999999999998887664 233323223345667888774
No 214
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.52 E-value=0.00042 Score=48.23 Aligned_cols=56 Identities=9% Similarity=-0.121 Sum_probs=39.9
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhh--hhhcCCCCeeEEEEEE
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLV--VWSINHPSITCHILLR 155 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~--~~~~~~~~~~~~~i~r 155 (169)
..++|.+|.++|||+ +.| |++||.|+++|++.+..- .+.. +...+......+.+.+
T Consensus 28 g~~~I~rI~~gg~a~------r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 28 GYAFIKRIKDGGVID------SVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp SCCEEEEECTTSHHH------HCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CcEEEEEEcCCChHH------hcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 458899999999999 876 999999999999987553 2333 2333344455555544
No 215
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=97.49 E-value=6.2e-05 Score=58.13 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=27.5
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeec
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
++|+++.++||+|||||+. +|+++||++...
T Consensus 131 ~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~ 161 (188)
T 2oua_A 131 LTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGS 161 (188)
T ss_dssp EEEESCCCCTTCTTCEEEE-TTEEEEEEEEEE
T ss_pred eEeeeeecCCCCccceEEE-CCEEEEEEeccC
Confidence 4789999999999999994 899999998753
No 216
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.39 E-value=9.3e-05 Score=63.15 Aligned_cols=57 Identities=9% Similarity=0.019 Sum_probs=42.2
Q ss_pred CcEEEEEEccCCcccccccccccC-CCCCcEEEecCceeecch--hhhhh--hhcCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYNSPAYFIKFRTSAG-IKPTSSRLLGECLAQYTT--SKLVV--WSINHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~spA~~~~~~~~aG-L~~GDvI~~~~~v~~~~~--~~~~~--~~~~~~~~~~~~i~r~ 156 (169)
.|++|.+|.++|||+ ++| |++||+|+++|+..+.+- .+... ........+.+.+.|.
T Consensus 232 ~g~~V~~V~~gspA~------~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~ 293 (388)
T 3suz_A 232 PTVILANMMNGGPAA------RSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC 293 (388)
T ss_dssp CCCBCCCCCCSSHHH------HTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEEC
T ss_pred CCEEEEeeCCCCHHH------HcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccc
Confidence 469999999999999 999 999999999999887544 33222 2222334567777774
No 217
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=97.36 E-value=0.00013 Score=55.47 Aligned_cols=30 Identities=33% Similarity=0.454 Sum_probs=26.2
Q ss_pred EeeccccCCCCccceEEcCCccEEEEEeeec
Q psy18070 2 SLTGIMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 2 iq~da~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
+|+++..++|+|||||++.+ +++||++...
T Consensus 130 ~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~ 159 (185)
T 2qa9_E 130 IRTNVCAEPGDSGGPLYSGT-RAIGLTSGGS 159 (185)
T ss_dssp EEESCCCCTTCTTCEEEETT-EEEEEEEEEE
T ss_pred EEecccCCCCCccceEEECC-EEEEEEEecC
Confidence 67888899999999999865 9999998753
No 218
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.26 E-value=0.00043 Score=51.70 Aligned_cols=34 Identities=15% Similarity=0.013 Sum_probs=30.4
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecch
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYTT 135 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~~ 135 (169)
| +|.+|.++|||+ ++||++||+|+++|+..+.+.
T Consensus 109 g-~v~~v~~~s~a~------~aGl~~GD~I~~ing~~v~~~ 142 (166)
T 1w9e_A 109 G-KITSIVKDSSAA------RNGLLTEHNICEINGQNVIGL 142 (166)
T ss_dssp T-EEEEECTTSHHH------HTTCCSSEEEEEETTEECTTC
T ss_pred C-EEEEEccCCHHH------HcCCCCCCEEEEECCEECCCC
Confidence 5 899999999999 999999999999988876553
No 219
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=97.24 E-value=0.0002 Score=55.22 Aligned_cols=50 Identities=18% Similarity=0.254 Sum_probs=34.7
Q ss_pred CEeeccccCCCCccceEEcCCccEEEEEeeecc--CCeEEEEehhhHHHHHHhh
Q psy18070 1 MSLTGIMVKFGNSGGPLVNLDGEVIGINSMKVT--AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 1 ~iq~da~in~GnSGGplvn~~G~vvGi~~~~~~--~~~~faiP~~~i~~~l~~l 52 (169)
++|+++.+++|+|||||+. +|+++||++.... ..-+..+= ..+..+++++
T Consensus 128 ~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c~~~~~~~~-~pi~~~l~~~ 179 (186)
T 2pfe_A 128 LTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDCRSGGITFF-QPINPLLSYF 179 (186)
T ss_dssp EEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEEEEEE-EEHHHHHHHH
T ss_pred eEeccEEecCCCccCeEEE-CCEEEEEEeecCCCCCCCCcEEE-EEHHHHHHHC
Confidence 3688999999999999995 8899999997642 12233332 2355555443
No 220
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.04 E-value=9.2e-05 Score=63.18 Aligned_cols=56 Identities=13% Similarity=-0.011 Sum_probs=0.0
Q ss_pred cEEEEEEccCCcccccccccccCCCCCcEEEecCceeecc--hhhhhhhhcCCCCeeEEEEEEe
Q psy18070 95 GVLIWRVMYNSPAYFIKFRTSAGIKPTSSRLLGECLAQYT--TSKLVVWSINHPSITCHILLRL 156 (169)
Q Consensus 95 Gv~V~~V~~~spA~~~~~~~~aGL~~GDvI~~~~~v~~~~--~~~~~~~~~~~~~~~~~~i~r~ 156 (169)
+.+|.+|.++|||+ ++||++||+|+++|+..+.+ ..+...........+.+.++..
T Consensus 316 ~g~I~~V~~gs~A~------~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p~ 373 (388)
T 3suz_A 316 NGIICSLMRGGIAE------RGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMPA 373 (388)
T ss_dssp ----------------------------------------------------------------
T ss_pred cCEEEEeecCCHHH------HcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEec
Confidence 44899999999999 99999999999999888753 3333323233444556666544
No 221
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.90 E-value=0.0021 Score=59.98 Aligned_cols=56 Identities=9% Similarity=-0.140 Sum_probs=43.3
Q ss_pred CcEEEEEEccC--------CcccccccccccC--CCCCcEEEecCceeecchhhhhhhh-cCCCCeeEEEEEEe
Q psy18070 94 HGVLIWRVMYN--------SPAYFIKFRTSAG--IKPTSSRLLGECLAQYTTSKLVVWS-INHPSITCHILLRL 156 (169)
Q Consensus 94 ~Gv~V~~V~~~--------spA~~~~~~~~aG--L~~GDvI~~~~~v~~~~~~~~~~~~-~~~~~~~~~~i~r~ 156 (169)
.+++|.+|.++ |||+ ++| |+ ||+|+++++.++....+..... ......+.+.+.|.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~------~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~~~g~~v~l~v~r~ 814 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIF------EYGIDPT-GYLIEDIDGETVGAGSNIYRVLSEKAGTSARIRLSGK 814 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGG------GGTCCCT-TCEEEEETTEECBTTBCHHHHHHTTTTSEEEEEEECS
T ss_pred CEEEEEEecCCCcccccCCChHH------HCCCCcC-CCEEEEECCEEccchhhHHHhhcCCCCCEEEEEEECC
Confidence 58999999998 9999 999 99 9999999998877654433332 23455678888873
No 222
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=95.22 E-value=0.012 Score=45.05 Aligned_cols=38 Identities=21% Similarity=0.365 Sum_probs=28.6
Q ss_pred cccCCCCccceEEcCCccEEEEEeeeccCCeEEEEehh
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPID 43 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~~ 43 (169)
....+|+|||||+..+|.++||++....-+-...++++
T Consensus 164 ~~~C~GDSGgPl~~~~g~lvGi~S~g~~c~~~p~v~t~ 201 (215)
T 1p3c_A 164 IDTFSGNSGSAMLDQNQQIVGVHNAGYSNGTINGGPKA 201 (215)
T ss_dssp CCCCTTCTTCEEECTTSCEEEECCEEEGGGTEEEEEBC
T ss_pred cccCCCCCCCeeEccCCeEEEEEecccCCCccCceeEe
Confidence 45789999999998899999998876544434455543
No 223
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=94.14 E-value=0.036 Score=42.59 Aligned_cols=26 Identities=35% Similarity=0.474 Sum_probs=21.9
Q ss_pred cccCCCCccceEEcCCccEEEEEeee
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.....|+|||||+..+|.++||.+..
T Consensus 173 ~~~C~GDSGgPL~~~~g~l~Gi~S~g 198 (224)
T 1pq7_A 173 KDSCQGDSGGPIVDSSNTLIGAVSWG 198 (224)
T ss_dssp CBCCTTCTTCEEECTTCCEEEEEEEC
T ss_pred CCCCcCCCCcceECcCCeEEEEEEeC
Confidence 34568999999998899999998764
No 224
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=94.09 E-value=0.062 Score=38.92 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=29.5
Q ss_pred cCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
-.||+||-|++|-.|+||+|+-....++...|+.+
T Consensus 96 g~~GdSGrpI~Dn~GrVVaIVlGG~~eg~rtaLSV 130 (149)
T 1vcp_A 96 GKPGDSGRPIFDNKGRVVAIVLGGANEGSRTALSV 130 (149)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEEECSSEEEEEE
T ss_pred CCCCCCCCccCcCCCcEEEEEecCCCCCCceeEEE
Confidence 46999999999999999999988877776666653
No 225
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=94.07 E-value=0.019 Score=43.49 Aligned_cols=25 Identities=36% Similarity=0.631 Sum_probs=20.9
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
-..+|.||.|++|.+|+|||+---.
T Consensus 114 D~p~GtSGSPIin~~G~vVGLYGNG 138 (172)
T 2fp7_B 114 DYPTGTSGSPIVDKNGDVIGLYGNG 138 (172)
T ss_dssp CCCGGGTTCEEECTTSCEEEESCCE
T ss_pred CCCCCCCCCceEccCCcEEEEecce
Confidence 3568999999999999999985433
No 226
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=93.94 E-value=0.067 Score=39.28 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=29.7
Q ss_pred cCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
-.||+||-|++|-.|+||+|+-....++...|+.+
T Consensus 105 G~~GDSGRpI~DN~GrVVaivlgg~~eg~rtaLSV 139 (161)
T 1svp_A 105 GGRGDAGRPIMDNSGRVVAIVLGGADEGTRTALSV 139 (161)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEEECSSEEEEEE
T ss_pred CCCCCCCCccCcCCCcEEEEEecCCCCCCceeEEE
Confidence 35899999999999999999988877776666654
No 227
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=93.92 E-value=0.03 Score=43.27 Aligned_cols=23 Identities=39% Similarity=0.751 Sum_probs=20.0
Q ss_pred ccCCCCccceEEcCCccEEEEEe
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINS 29 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~ 29 (169)
-..+|.||.|++|.+|+|||+=-
T Consensus 133 D~p~GTSGSPIin~~G~VVGLYG 155 (198)
T 3e90_B 133 DFPTGTSGSPIVDKNGDVIGLYG 155 (198)
T ss_dssp CCCTTCTTCEEECTTCCEEEECC
T ss_pred CCCCCCCCCceecCCCcEEEEec
Confidence 35689999999999999999843
No 228
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=93.87 E-value=0.054 Score=39.65 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=29.5
Q ss_pred ccCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
.-.||+||-|++|-.|+||+|+-....++...|+.+
T Consensus 102 ~g~~GdSGrpI~Dn~GrVVaIVlGGa~eg~rtaLSV 137 (157)
T 1ep5_B 102 VGAKGDSGRPILDNQGRVVAIVLGGVNEGSRTALSV 137 (157)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCCCCccCcCCCcEEEEEecCCCCCCceeEEE
Confidence 457999999999999999999887777666666553
No 229
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=93.80 E-value=0.023 Score=43.57 Aligned_cols=25 Identities=32% Similarity=0.581 Sum_probs=20.8
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
-..+|.||.|++|.+|+|||+---.
T Consensus 129 D~p~GTSGSPIin~~G~vvGLYGNG 153 (185)
T 2fom_B 129 DFSPGTSGSPIVDKKGKVVGLYGNG 153 (185)
T ss_dssp CSCGGGTTCEEECTTSCEEEETTCE
T ss_pred CCCCCCCCCceEccCCcEEEEecce
Confidence 3568999999999999999984433
No 230
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=93.77 E-value=0.024 Score=43.44 Aligned_cols=25 Identities=36% Similarity=0.647 Sum_probs=21.4
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
-..+|.||.|++|.+|+|||+---.
T Consensus 128 D~p~GTSGSPIin~~G~vvGLYGNG 152 (185)
T 2ggv_B 128 DFPTGTSGSPIVDKNGDVIGLYGNG 152 (185)
T ss_dssp CCCGGGTTCEEECTTSCEEEEEEEE
T ss_pred CCCCCCCCCceEcCCCcEEEEecce
Confidence 3568999999999999999986544
No 231
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=93.74 E-value=0.034 Score=42.80 Aligned_cols=23 Identities=39% Similarity=0.772 Sum_probs=20.0
Q ss_pred ccCCCCccceEEcCCccEEEEEe
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINS 29 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~ 29 (169)
-..+|.||.|++|.+|+|||+=-
T Consensus 138 D~p~GTSGSPIin~~G~VVGLYG 160 (191)
T 3u1j_B 138 DFKPGTSGSPIINREGKVVGLYG 160 (191)
T ss_dssp CCCTTCTTCEEECTTSCEEEECC
T ss_pred CCCCCCCCCceecCCCcEEEEec
Confidence 35689999999999999999843
No 232
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=93.69 E-value=0.08 Score=38.77 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=30.2
Q ss_pred cccCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
..-.||.||-|.+|-.|+||+|+-...++|.-.|+.+
T Consensus 102 g~g~~GdSGrPi~Dn~GrVVaIVlGG~neG~RtaLSV 138 (158)
T 4agk_A 102 GAGGPGDSGRPILDNSGKVVAIVLGGANEGARTALSV 138 (158)
T ss_dssp TSSCTTCTTCEEECTTSCEEEEEEEEEECSSEEEEEE
T ss_pred ccCCCCCCCCccccCCCCEEEEEecCCCcCceeeEEE
Confidence 3457999999999999999999988877776555543
No 233
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=93.55 E-value=0.14 Score=39.06 Aligned_cols=50 Identities=18% Similarity=0.381 Sum_probs=35.5
Q ss_pred cccCCCCccceEEcCCccEEEEEeeecc---CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKVT---AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~~---~~~~faiP~~~i~~~l~~l~~~g 56 (169)
.....|+|||||+. +|+++||.+.... ...+...-+......+++..+..
T Consensus 179 ~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~~~ 231 (235)
T 3h7t_A 179 TYIGYGDAGDPAVQ-NGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIISGK 231 (235)
T ss_dssp BBCCTTCTTCEEEE-TTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHTTC
T ss_pred CccccCCCCCceee-CCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHhCC
Confidence 34567999999996 8899999997653 23456666666666666655443
No 234
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=93.41 E-value=0.082 Score=41.87 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=30.0
Q ss_pred cCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
=.||+||-|++|-.|+||+|+-.+.++|.-.|+.+
T Consensus 200 G~~GDSGRpI~DN~GrVVaIVLGGanEG~RTaLSV 234 (253)
T 2yew_A 200 GKPGDSGRPIFDNTGKVVAIVLGGANEGARTALSV 234 (253)
T ss_dssp CCSSCTTCEEECSSCBEEEEEEEEEECSSEEEEEE
T ss_pred CCCCCCCCccccCCCcEEEEEecCCCcCCceeEEE
Confidence 36899999999999999999988888887777654
No 235
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=93.26 E-value=0.044 Score=43.44 Aligned_cols=22 Identities=36% Similarity=0.836 Sum_probs=19.6
Q ss_pred cCCCCccceEEcCCccEEEEEe
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINS 29 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~ 29 (169)
..+|.||.|++|.+|+|||+=-
T Consensus 180 ~p~GTSGSPIin~~G~VvGLYG 201 (236)
T 3lkw_A 180 FKPGTAGSPIVNREGKIVGLYG 201 (236)
T ss_dssp CCTTCTTCEEECTTSCEEEESC
T ss_pred CCCCCCCCceecCCCcEEEEec
Confidence 5689999999999999999843
No 236
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=92.63 E-value=0.21 Score=38.24 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=33.5
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhc
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~ 55 (169)
....|+|||||+. +++++||.+.... ...+...-+...+..+++..+.
T Consensus 178 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 230 (238)
T 4e7n_A 178 DTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAG 230 (238)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTT
T ss_pred ccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhc
Confidence 3567999999995 7899999997753 2245556666666666655544
No 237
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=92.62 E-value=0.22 Score=37.99 Aligned_cols=48 Identities=21% Similarity=0.223 Sum_probs=34.1
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhc
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~ 55 (169)
....|+|||||+. +++++||.+.... ...+...-+...+..+++..+.
T Consensus 174 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 226 (234)
T 3s69_A 174 DTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAG 226 (234)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred ccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcC
Confidence 4567999999995 7899999997753 1245566666666666665544
No 238
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=92.59 E-value=0.098 Score=41.75 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=29.4
Q ss_pred cCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
=-||+||-|++|-.|+||+|+-.+.++|.-.|+.+
T Consensus 210 G~~GDSGRpI~DN~GrVVaIVLGGaneG~RTaLSV 244 (264)
T 1kxf_A 210 GGRGDSGRPIMDNSGRVVAIVLGGADEGTRTALSV 244 (264)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEE
T ss_pred CCCCCCCCccccCCCcEEEEEecCCCcCCceeEEE
Confidence 35899999999999999999988877776666654
No 239
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=92.48 E-value=0.18 Score=40.41 Aligned_cols=49 Identities=31% Similarity=0.613 Sum_probs=36.1
Q ss_pred eeccccCCCCccceEEcC-CccEEEEEeeecc-CCeEEEEehh--hHHHHHHh
Q psy18070 3 LTGIMVKFGNSGGPLVNL-DGEVIGINSMKVT-AGISFAIPID--YAIEFLTN 51 (169)
Q Consensus 3 q~da~in~GnSGGplvn~-~G~vvGi~~~~~~-~~~~faiP~~--~i~~~l~~ 51 (169)
++-.+..+|+-|+|||+. +|.+||+.+.... ...+|+.|+. ....+|..
T Consensus 141 kHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~~~~N~F~~f~~~f~~~~L~~ 193 (241)
T 3mmg_A 141 QHWITTKDGQAGSPLVSIIDGNILGIHSLTHTTNGSNYFVEFPEKFVATYLDA 193 (241)
T ss_dssp EECBCCCTTCTTCEEEETTTCCEEEEEEEEETTTCCEEEEECCTTHHHHHTTC
T ss_pred EEEcCCCCCcCCCeEEEcCCCcEEEEEecccCCCCcEEEEcCCHHHHHHHhhC
Confidence 466788999999999998 7999999998764 3456666653 33334444
No 240
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=92.34 E-value=0.12 Score=40.04 Aligned_cols=28 Identities=32% Similarity=0.287 Sum_probs=22.1
Q ss_pred cccCCCCccceEEcC---CccEEEEEeeecc
Q psy18070 6 IMVKFGNSGGPLVNL---DGEVIGINSMKVT 33 (169)
Q Consensus 6 a~in~GnSGGplvn~---~G~vvGi~~~~~~ 33 (169)
++...|+|||||+.. .++++||++....
T Consensus 162 Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~g 192 (218)
T 3cp7_A 162 CNMTGGSSGGPWFLGNGTGGAQNSTNSYGYT 192 (218)
T ss_dssp CCCCTTCTTCEEEESSSSSSCEEEECCEEET
T ss_pred CCCCCCCcCCeeEEccCCCeEEEEEEccccC
Confidence 344579999999965 3799999997754
No 241
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=92.30 E-value=0.26 Score=37.69 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~~~g 56 (169)
....|+|||||+. +++++||.+.... ...+...-+...+..+++.++..
T Consensus 174 ~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 174 DTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 3457999999995 7899999987753 12456666666666666665543
No 242
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=91.99 E-value=0.097 Score=42.25 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=22.0
Q ss_pred cCCCCccceEEcCCccEEEEEeeec
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
.-.|+|||||++.+++++||.+...
T Consensus 189 tC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 189 TEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEECS
T ss_pred CccCcccCCcEeeCCEEEEEEeecC
Confidence 5689999999987899999999764
No 243
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=91.93 E-value=0.36 Score=37.11 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=33.7
Q ss_pred cccCCCCccceEEcCCccEEEEEeee-cc----CCeEEEEehhhHHHHHHhhhhc
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMK-VT----AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~-~~----~~~~faiP~~~i~~~l~~l~~~ 55 (169)
.....|+|||||+- +|+++||.+.. .. ...+...-+......+++..+.
T Consensus 170 ~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 170 KDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 34568999999996 68999999987 32 2245556666666666555443
No 244
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=91.58 E-value=0.32 Score=37.28 Aligned_cols=45 Identities=22% Similarity=0.315 Sum_probs=30.3
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+- +|+++||.+.... ...+...-+......+++.
T Consensus 175 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (228)
T 1fxy_A 175 DSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNT 223 (228)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred ccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHH
Confidence 4568999999995 7899999997653 2244455555544444443
No 245
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=91.28 E-value=0.47 Score=36.46 Aligned_cols=46 Identities=26% Similarity=0.319 Sum_probs=31.8
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~ 53 (169)
....|+|||||+- ++.++||.+.... ...+...-+...+..+++..
T Consensus 183 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 233 (237)
T 2zch_P 183 STCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233 (237)
T ss_dssp BCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 4568999999995 7899999997652 22455566665555555443
No 246
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=91.18 E-value=0.49 Score=36.06 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=34.0
Q ss_pred cccCCCCccceEEcCCccEEEEEeeec-c--CCeEEEEehhhHHHHHHhhhhc
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKV-T--AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~-~--~~~~faiP~~~i~~~l~~l~~~ 55 (169)
.....|+|||||+.. |.++||.+... . .+.+...-+...+..+++..+.
T Consensus 168 ~~~C~GDSGgPl~~~-g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~ 219 (225)
T 1a7s_A 168 GGICNGDGGTPLVCE-GLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNN 219 (225)
T ss_dssp CBCCTTCTTCEEEET-TEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHS
T ss_pred CCcccCCCcchheeC-CEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcC
Confidence 356789999999964 89999999873 2 2255666666666666555443
No 247
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=91.15 E-value=0.36 Score=34.89 Aligned_cols=44 Identities=25% Similarity=0.443 Sum_probs=29.4
Q ss_pred ccCCCCccceEEcCCccEEEEEeee-cc----CCeEEEEehhhHHHHHHh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK-VT----AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~-~~----~~~~faiP~~~i~~~l~~ 51 (169)
..-.|.|||||+- +|+++||.+.. .. ...+...-+......+++
T Consensus 98 ~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~ 146 (152)
T 2pka_B 98 DTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDD 146 (152)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHH
T ss_pred cccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 4567999999996 58999999976 32 123555555554444444
No 248
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=91.03 E-value=0.33 Score=37.49 Aligned_cols=45 Identities=24% Similarity=0.247 Sum_probs=30.8
Q ss_pred cCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhh
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~ 53 (169)
...|+|||||+. +|.++||.+.... ...+...-+...+..+++..
T Consensus 187 ~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 236 (240)
T 1sgf_A 187 TCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236 (240)
T ss_dssp ECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHH
T ss_pred CCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHH
Confidence 567999999996 7899999997631 12455555655555555443
No 249
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=90.98 E-value=0.15 Score=39.17 Aligned_cols=46 Identities=24% Similarity=0.376 Sum_probs=32.4
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~ 53 (169)
....|+|||||+ .+|.++||.+.... ...+...-+......+++..
T Consensus 172 ~~C~GDSGgPL~-~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 172 GTCNGDSGGPLN-YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp BCCTTCTTCEEE-ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred ccCCCCCCcceE-ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 356899999999 58999999997752 22456666666555555443
No 250
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=90.91 E-value=0.17 Score=38.59 Aligned_cols=25 Identities=48% Similarity=0.864 Sum_probs=20.7
Q ss_pred cccCCCCccceEEcCCccEEEEEeee
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.....|+|||||+. +|.++||.+..
T Consensus 169 ~~~C~GDSGgPL~~-~~~l~Gi~s~~ 193 (221)
T 1fuj_A 169 AGICFGDSGGPLIC-DGIIQGIDSFV 193 (221)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred CCCCCCCCCCeeEE-CCEEeEEEEEe
Confidence 45678999999996 78999998754
No 251
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=90.86 E-value=0.42 Score=36.67 Aligned_cols=46 Identities=26% Similarity=0.313 Sum_probs=31.4
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l~ 53 (169)
....|+|||||+- +|.++||.+.... ...+...-+...+..+++..
T Consensus 181 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 231 (235)
T 1ton_A 181 DTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231 (235)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 4568999999996 7899999997632 12455555655555555443
No 252
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=90.76 E-value=0.17 Score=38.77 Aligned_cols=25 Identities=40% Similarity=0.595 Sum_probs=21.0
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+. +|+++||.+...
T Consensus 170 ~~C~GDSGgPL~~-~~~l~Gi~S~g~ 194 (222)
T 1hj8_A 170 DSCQGDSGGPVVC-NGELQGVVSWGY 194 (222)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECS
T ss_pred ccCCCCcccceEE-CCEEEEEEeecC
Confidence 4568999999995 789999988654
No 253
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=90.61 E-value=0.5 Score=36.28 Aligned_cols=45 Identities=22% Similarity=0.245 Sum_probs=30.9
Q ss_pred ccCCCCccceEEcCCccEEEEEeee-cc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK-VT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~-~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+- +|.++||.+.. .. ...+...-+.....-+++.
T Consensus 183 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 1ao5_A 183 DTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDT 232 (237)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHH
T ss_pred CCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 4568999999996 78999999977 32 1245556665555555443
No 254
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=90.51 E-value=0.19 Score=38.58 Aligned_cols=25 Identities=48% Similarity=0.648 Sum_probs=20.8
Q ss_pred cccCCCCccceEEcCCccEEEEEeee
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.....|+|||||+. +|.++||.+..
T Consensus 173 ~~~C~GDSGgPL~~-~~~l~GI~S~g 197 (225)
T 1npm_A 173 ADTCQGDSGGPLVC-DGMLQGITSWG 197 (225)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred CeecCCCCCchheE-CCEEEEEEEeC
Confidence 34568999999995 78999998865
No 255
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=90.39 E-value=0.43 Score=36.54 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=30.0
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec-c----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV-T----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~-~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+- +|+++||.+... . ...+...-+......+++.
T Consensus 170 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 219 (224)
T 2qxi_A 170 NACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDT 219 (224)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHH
T ss_pred ccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 4568999999996 789999999762 2 1234455555544444443
No 256
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=90.36 E-value=0.57 Score=31.37 Aligned_cols=26 Identities=38% Similarity=0.576 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~~ 32 (169)
..-.|+|||||+-..+ .++||.+...
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~ 69 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGS 69 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCC
Confidence 3467999999995332 7999998765
No 257
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=90.35 E-value=0.2 Score=38.46 Aligned_cols=25 Identities=40% Similarity=0.554 Sum_probs=20.9
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+. +|+++||.+...
T Consensus 171 ~~C~GDSGgPL~~-~~~l~GI~S~g~ 195 (223)
T 3mfj_A 171 DSCQGDSGGPVVC-SGKLQGIVSWGS 195 (223)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECS
T ss_pred CcCCCCcccceEE-CCEEEEEEEECC
Confidence 4568999999996 789999988653
No 258
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=90.10 E-value=0.41 Score=36.68 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=29.9
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec-c----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV-T----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~-~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+. +|.++||.+... . ...+...-+......+++.
T Consensus 173 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 222 (227)
T 2psx_A 173 DSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQET 222 (227)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHH
T ss_pred ccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHH
Confidence 3468999999995 679999999762 2 2245555555544444443
No 259
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=89.89 E-value=0.55 Score=36.02 Aligned_cols=25 Identities=32% Similarity=0.528 Sum_probs=21.2
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
..-.|+|||||+- +|.++||.+...
T Consensus 178 ~~C~GDSGgPL~~-~~~l~GI~S~g~ 202 (234)
T 1orf_A 178 DSCNGDSGSPLLC-EGVFRGVTSFGL 202 (234)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECC
T ss_pred cCCCCCCCCeEEE-CCEEEEEEEEcC
Confidence 3567999999995 789999999775
No 260
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=89.71 E-value=0.56 Score=36.08 Aligned_cols=25 Identities=32% Similarity=0.360 Sum_probs=21.2
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+- +|.++||++...
T Consensus 184 ~~C~GDSGGPL~~-~~~l~Gi~S~g~ 208 (240)
T 1mza_A 184 DSCKGDAGGPLIC-KGVFHAIVSGGH 208 (240)
T ss_dssp CCCTTCTTCEEEE-TTEEEEEECSSC
T ss_pred ccCCCCCCCeeEE-CCEEEEEEEECC
Confidence 4568999999996 789999998765
No 261
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=89.68 E-value=0.63 Score=35.69 Aligned_cols=45 Identities=27% Similarity=0.426 Sum_probs=30.1
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec-c----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV-T----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~-~----~~~~faiP~~~i~~~l~~l 52 (169)
..-.|+|||||+- +|.++||.+... . ...+...-+.....-+++.
T Consensus 184 ~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 233 (238)
T 1spj_A 184 DTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDT 233 (238)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 4568999999995 789999999773 2 1234455555544444443
No 262
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=89.62 E-value=0.22 Score=38.16 Aligned_cols=24 Identities=42% Similarity=0.499 Sum_probs=20.1
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
..-.|+|||||+- +|.++||.+..
T Consensus 177 ~~C~GDSGgPL~~-~~~l~Gi~S~g 200 (227)
T 1iau_A 177 TSFKGDSGGPLVC-NKVAQGIVSYG 200 (227)
T ss_dssp BCCTTCTTSEEEE-TTEEEEEEEEE
T ss_pred eeeecCCCchheE-eeEEEEEEeEe
Confidence 4557999999996 78999998865
No 263
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=89.58 E-value=0.22 Score=37.83 Aligned_cols=26 Identities=38% Similarity=0.506 Sum_probs=21.1
Q ss_pred cccCCCCccceEEcCCccEEEEEeeec
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
.....|+|||||+. +++++||.+...
T Consensus 170 ~~~C~GDsGgPl~~-~~~l~Gi~S~g~ 195 (223)
T 4i8h_A 170 KDSCQGDSGGPVVC-SGKLQGIVSWGS 195 (223)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEECS
T ss_pred CccCCCCCCCcEEE-CCEEEEEEEcCC
Confidence 34567999999995 779999988654
No 264
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=89.44 E-value=0.26 Score=37.51 Aligned_cols=25 Identities=48% Similarity=0.717 Sum_probs=20.6
Q ss_pred cccCCCCccceEEcCCccEEEEEeee
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.....|+|||||+. +|.++||.+..
T Consensus 166 ~~~C~GDSGgPl~~-~~~l~Gi~S~~ 190 (218)
T 2z7f_E 166 AGVCFGDSGSPLVC-NGLIHGIASFV 190 (218)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred CeeCCCcCCCceEE-ccEEEEEEEeC
Confidence 34678999999995 78999998863
No 265
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=89.38 E-value=0.22 Score=38.09 Aligned_cols=25 Identities=48% Similarity=0.720 Sum_probs=20.7
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+- +|.++||.+...
T Consensus 172 ~~C~GDSGgPL~~-~~~l~GI~S~g~ 196 (222)
T 1eq9_A 172 GACHGDSGGPLVA-NGAQIGIVSFGS 196 (222)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECS
T ss_pred eeeeCCccceEEE-CCEEEEEEEECC
Confidence 4568999999996 789999988653
No 266
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=89.05 E-value=0.26 Score=37.80 Aligned_cols=25 Identities=36% Similarity=0.553 Sum_probs=20.7
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+. +|.++||.+...
T Consensus 171 ~~C~GDsGgPL~~-~~~l~Gi~S~g~ 195 (223)
T 2bdg_A 171 DSCNGDSGGPLIC-NGYLQGLVSFGK 195 (223)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECC
T ss_pred CcCCCCCCchheE-ccEEEEEEEecC
Confidence 4568999999995 689999988653
No 267
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=88.98 E-value=0.29 Score=37.48 Aligned_cols=24 Identities=38% Similarity=0.491 Sum_probs=20.5
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
....|+|||||+. +|+++||.+..
T Consensus 170 ~~C~GDsGgPL~~-~~~l~Gi~S~g 193 (223)
T 1lo6_A 170 DSCQGDSGGPLVC-GDHLRGLVSWG 193 (223)
T ss_dssp BCCTTTTTCEEEE-TTEEEEEEEEC
T ss_pred eeccccCCCcEEe-CCEEEEEEeeC
Confidence 4568999999996 78999998865
No 268
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=88.58 E-value=0.17 Score=39.01 Aligned_cols=45 Identities=22% Similarity=0.309 Sum_probs=30.2
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc-----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT-----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~-----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+- +|.++||.+.... ...+...-+.....-+++.
T Consensus 183 ~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 1gvz_A 183 SICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKET 232 (237)
T ss_dssp EECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHH
T ss_pred ccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 3567999999995 8999999987642 1234555555555544443
No 269
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=88.23 E-value=0.81 Score=34.95 Aligned_cols=41 Identities=29% Similarity=0.421 Sum_probs=27.3
Q ss_pred CCCccceEEcCCccEEEEEeeecc--CCeEEEEehhhHHHHHHh
Q psy18070 10 FGNSGGPLVNLDGEVIGINSMKVT--AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~~~~--~~~~faiP~~~i~~~l~~ 51 (169)
.|+|||||+- +|.++||.+..-. ...+...-+......+.+
T Consensus 179 ~GDsGgPL~~-~~~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI~~ 221 (227)
T 1euf_A 179 SGDSGGPLVC-NGVAQGIVSYGRNDGTTPDVYTRISSFLSWIHS 221 (227)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCTTCCSCEEEEEGGGTHHHHHH
T ss_pred ccCCCCceEE-CCEEEEEEEEeCCCCCCCeEEEEHHHhHHHHHH
Confidence 7999999995 7899999987632 123444555544444443
No 270
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=87.97 E-value=0.33 Score=36.90 Aligned_cols=26 Identities=38% Similarity=0.505 Sum_probs=21.5
Q ss_pred ccCCCCccceEEcCCccEEEEEeeecc
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKVT 33 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~~ 33 (169)
....|+|||||+- ++.++||.+....
T Consensus 176 ~~C~GDsGgPl~~-~~~l~Gi~S~g~~ 201 (226)
T 4ag1_A 176 SAFKGDSGGPLLC-AGVAQGIVSYGRS 201 (226)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEEEECBT
T ss_pred cCccCCCCCceEE-cCEEEEEEEECCC
Confidence 4567999999995 7899999987654
No 271
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=87.77 E-value=1.1 Score=34.37 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=30.2
Q ss_pred ccCCCCccceEEcCCc-----cEEEEEeeecc--CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDG-----EVIGINSMKVT--AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G-----~vvGi~~~~~~--~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-.++ .++||.+.... .+.+...-+......+++.
T Consensus 185 ~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~ 237 (242)
T 2qy0_B 185 DACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKE 237 (242)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHH
T ss_pred ccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHH
Confidence 4568999999996433 49999997653 2345555555555555443
No 272
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=87.74 E-value=0.89 Score=34.95 Aligned_cols=49 Identities=18% Similarity=0.204 Sum_probs=33.2
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeeecc----CCeEEEEehhhHHHHHHhhhhc
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMKVT----AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~ 55 (169)
....|+|||||+-.++ .++||.+.... ...+...-+......+++....
T Consensus 173 ~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~ 228 (240)
T 1si5_H 173 GPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILT 228 (240)
T ss_dssp BCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred EeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 4567999999996544 89999987653 2245566666666666655433
No 273
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=87.44 E-value=0.3 Score=37.33 Aligned_cols=24 Identities=33% Similarity=0.509 Sum_probs=19.7
Q ss_pred ccCCCCccceEEcCCccEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
..-.|+|||||+. +|.++||.+..
T Consensus 177 ~~C~GDsGgPL~~-~~~l~Gi~s~g 200 (228)
T 2xw9_A 177 DSCKGDAGGPLVC-GGVLEGVVTSG 200 (228)
T ss_dssp BCCTTCTTCEEEE-TTEEEEEECCS
T ss_pred ccCCCCCcccEEE-CCEEEEEEeec
Confidence 4557999999996 78999998754
No 274
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=86.83 E-value=0.3 Score=37.09 Aligned_cols=25 Identities=20% Similarity=0.492 Sum_probs=20.6
Q ss_pred ccCCCCccceEEcCCccEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
....|+|||||+. +++++||.+...
T Consensus 177 ~~C~GDsGgPl~~-~~~l~Gi~S~g~ 201 (228)
T 3h7o_A 177 SLESGDAGDPTVQ-QDTLVGVAAYFP 201 (228)
T ss_dssp CCCGGGTTCEEEE-TTEEEEEECCCT
T ss_pred cCCCCCCCCccee-cCeEEEEEeecC
Confidence 4567999999996 789999988653
No 275
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=86.30 E-value=1 Score=34.89 Aligned_cols=49 Identities=20% Similarity=0.346 Sum_probs=32.0
Q ss_pred ccCCCCccceEEcC-Ccc--EEEEEeeecc----CCeEEEEehhhHHHHHHhhhhc
Q psy18070 7 MVKFGNSGGPLVNL-DGE--VIGINSMKVT----AGISFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G~--vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~ 55 (169)
....|+|||||+-. +|+ ++||.+.... ...+...-+......+.+..+.
T Consensus 185 ~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 240 (250)
T 1aut_C 185 DACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIRD 240 (250)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred CCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence 45689999999953 464 9999987653 2245556666655555554433
No 276
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=85.75 E-value=1.3 Score=33.91 Aligned_cols=46 Identities=22% Similarity=0.226 Sum_probs=29.7
Q ss_pred ccCCCCccceEEcCC---c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLD---G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~---G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-.+ | .++||.+.... ...+...-+...+..+++.
T Consensus 199 ~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 253 (259)
T 3rm2_H 199 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKV 253 (259)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHH
T ss_pred cccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 567899999999543 2 69999997753 1235555555544444443
No 277
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=85.63 E-value=1.3 Score=33.84 Aligned_cols=46 Identities=24% Similarity=0.317 Sum_probs=30.4
Q ss_pred ccCCCCccceEEcC---Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNL---DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~---~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-. +| .++||.+.... ...+....+...+..+++.
T Consensus 192 ~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 246 (251)
T 3gov_B 192 DACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRV 246 (251)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHH
T ss_pred ccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHH
Confidence 45689999999964 34 69999997753 1245556665555555443
No 278
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=85.04 E-value=0.73 Score=35.19 Aligned_cols=26 Identities=38% Similarity=0.504 Sum_probs=19.6
Q ss_pred ccCCCCccceEE--cCCcc--EEEEEeeec
Q psy18070 7 MVKFGNSGGPLV--NLDGE--VIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplv--n~~G~--vvGi~~~~~ 32 (169)
....|+|||||+ +.+|+ ++||.+...
T Consensus 185 ~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~ 214 (241)
T 3ncl_A 185 DSCQGDSGGPLSSVEADGRIFQAGVVSWGD 214 (241)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECS
T ss_pred ccCCCcCCCCEEEEcCCCcEEEEEEEEECC
Confidence 456899999998 34565 889988653
No 279
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=84.61 E-value=1.6 Score=33.52 Aligned_cols=47 Identities=23% Similarity=0.338 Sum_probs=30.8
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhh
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~ 53 (169)
....|+|||||+-.. | .++||.+.... ...+...-+......+.+..
T Consensus 182 ~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 235 (241)
T 2any_A 182 DACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235 (241)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 456899999999653 4 69999997653 22455555655555555443
No 280
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=84.09 E-value=0.59 Score=35.76 Aligned_cols=26 Identities=42% Similarity=0.498 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcCCc----cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDG----EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G----~vvGi~~~~~ 32 (169)
....|+|||||+..++ .++||.+...
T Consensus 176 ~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~ 205 (232)
T 2oq5_A 176 DACQGDSGGPLVSSDARDIWYLAGIVSWGD 205 (232)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECS
T ss_pred ccCCCCCCCcEEEECCCCCEEEEEEEEeCC
Confidence 4568999999996443 6999988653
No 281
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=84.04 E-value=0.76 Score=34.79 Aligned_cols=26 Identities=35% Similarity=0.458 Sum_probs=20.3
Q ss_pred ccCCCCccceEEcCC--c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD--G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~--G--~vvGi~~~~~ 32 (169)
....|+|||||+-.+ | .++||.+...
T Consensus 167 ~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~ 196 (224)
T 3beu_A 167 DTCQGDSGGPMFRKDNADEWVQVGIVSWGE 196 (224)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEEES
T ss_pred cCCCCcCCCeeEEecCCCCEEEEEEeccCC
Confidence 456899999999654 2 6899998764
No 282
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=83.95 E-value=0.59 Score=35.90 Aligned_cols=25 Identities=44% Similarity=0.642 Sum_probs=20.0
Q ss_pred ccCCCCccceEEcCCc--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDG--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G--~vvGi~~~~ 31 (169)
....|+|||||+-.+| .++||.+..
T Consensus 185 ~~C~GDSGgPL~~~~~~~~l~Gi~S~~ 211 (241)
T 1m9u_A 185 GACNGDSGGPLNCPDGGTRVVGVTSWV 211 (241)
T ss_dssp BCCTTCTTCEEEEESSSEEEEEEEEEC
T ss_pred eeecCcCCccEEEeCCCEEEEEEEEEe
Confidence 4567999999997545 899998863
No 283
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=83.74 E-value=1.1 Score=34.43 Aligned_cols=46 Identities=15% Similarity=0.162 Sum_probs=29.9
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-..+ .++||.+.... ...+...-+......+++.
T Consensus 172 ~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 224 (234)
T 2asu_B 172 GACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKV 224 (234)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred eeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 3567999999996443 89999987653 2245555555555555443
No 284
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=83.63 E-value=1.5 Score=33.76 Aligned_cols=46 Identities=22% Similarity=0.165 Sum_probs=29.4
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-.. | .++||.+.... ...+...-+...+..+++.
T Consensus 188 ~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~ 240 (261)
T 3gyl_B 188 DACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSK 240 (261)
T ss_dssp BCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred ccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHH
Confidence 456899999999654 4 59999987643 2234455555444444443
No 285
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=83.57 E-value=0.63 Score=35.92 Aligned_cols=26 Identities=42% Similarity=0.561 Sum_probs=20.4
Q ss_pred ccCCCCccceEEcC--Cc--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNL--DG--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~--~G--~vvGi~~~~~ 32 (169)
....|+|||||+-. +| .++||.+...
T Consensus 182 ~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~ 211 (241)
T 1bru_P 182 SSCNGDSGGPLNCQGANGQWQVHGIVSFGS 211 (241)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECB
T ss_pred ccCCCCCCCcEEEECCCCCEEEEEEEEEcC
Confidence 35679999999954 46 8999988754
No 286
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=83.53 E-value=1.5 Score=33.58 Aligned_cols=48 Identities=21% Similarity=0.236 Sum_probs=32.4
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhhh
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYKR 54 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~ 54 (169)
....|+|||||+.. +| .++||.+.... ...+...-+......+++..+
T Consensus 179 ~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (241)
T 2jkh_A 179 DACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 233 (241)
T ss_dssp BCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred ccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhc
Confidence 45689999999964 34 59999997653 224556666666666655543
No 287
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=82.38 E-value=0.76 Score=35.53 Aligned_cols=47 Identities=21% Similarity=0.278 Sum_probs=30.6
Q ss_pred ccCCCCccceEEcCCc--cEEEEEeeec-c----CCeEEEEehhhHHHHHHhhhh
Q psy18070 7 MVKFGNSGGPLVNLDG--EVIGINSMKV-T----AGISFAIPIDYAIEFLTNYKR 54 (169)
Q Consensus 7 ~in~GnSGGplvn~~G--~vvGi~~~~~-~----~~~~faiP~~~i~~~l~~l~~ 54 (169)
..-.|+|||||+- ++ .++||.+... . ...+...-+.....-+++...
T Consensus 176 ~~C~GDSGgPL~~-~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 229 (240)
T 2zgc_A 176 APCKGDSGGPLVC-GKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTG 229 (240)
T ss_dssp BCCTTCTTCEEEE-TTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHC
T ss_pred ccCCCCccCeeEE-CCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 4568999999995 45 8999999762 2 123445555555555555443
No 288
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=81.86 E-value=2.2 Score=32.77 Aligned_cols=46 Identities=26% Similarity=0.426 Sum_probs=30.0
Q ss_pred cCCCCccceEEcC-Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhh
Q psy18070 8 VKFGNSGGPLVNL-DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 8 in~GnSGGplvn~-~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~ 53 (169)
...|+|||||+-. +| .++||.+.... ...+...-+......+++..
T Consensus 189 ~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 189 SCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred cCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 4679999999964 46 58999987653 22355555555555554443
No 289
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=81.78 E-value=0.93 Score=34.62 Aligned_cols=27 Identities=41% Similarity=0.577 Sum_probs=21.0
Q ss_pred cccCCCCccceEEcCC--c--cEEEEEeeec
Q psy18070 6 IMVKFGNSGGPLVNLD--G--EVIGINSMKV 32 (169)
Q Consensus 6 a~in~GnSGGplvn~~--G--~vvGi~~~~~ 32 (169)
...-.|+|||||+-.+ | .++||.+...
T Consensus 181 ~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~ 211 (238)
T 1ym0_A 181 RDSCQGDSGGPLSVKDGSGIFSLVGIVSWGI 211 (238)
T ss_dssp CBCCTTTTTCEEEEECTTCCEEEEEEEEECS
T ss_pred CccCCCccCCeeEEECCCCCEEEEEEEeECC
Confidence 4567899999998654 4 6999988754
No 290
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=81.67 E-value=0.81 Score=35.15 Aligned_cols=26 Identities=42% Similarity=0.570 Sum_probs=20.2
Q ss_pred ccCCCCccceEEcC--Cc--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNL--DG--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~--~G--~vvGi~~~~~ 32 (169)
....|+|||||+-. +| .++||.+...
T Consensus 181 ~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~ 210 (240)
T 1fon_A 181 SGCNGDSGGPLNCPAADGSWQVHGVTSFVS 210 (240)
T ss_dssp CSTTSCTTCEEEEECSSSCEEEEEEEEECC
T ss_pred cccCCCCCCeEEeEcCCCCEEEEEEEEEcC
Confidence 34679999999954 56 8999988653
No 291
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=81.59 E-value=1.2 Score=34.09 Aligned_cols=25 Identities=40% Similarity=0.461 Sum_probs=19.6
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~ 31 (169)
....|+|||||+-.++ .++||.+..
T Consensus 183 ~~C~GDSGgPL~~~~~~~~~l~Gi~S~g 210 (237)
T 2f91_A 183 DSCQGDSGGPLAASDTGSTYLAGIVSWG 210 (237)
T ss_dssp BCCTTCTTCEEEECTTSSCEEEEEEEEE
T ss_pred CCCCCcCCCCeEEecCCCEEEEEEEEec
Confidence 4568999999996543 799998865
No 292
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=81.58 E-value=2.3 Score=32.64 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=32.1
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhhh
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYKR 54 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~ 54 (169)
....|+|||||+-. +| .++||.+.... ...+...-+......+++..+
T Consensus 185 ~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 239 (248)
T 2r0l_A 185 DACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 239 (248)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC
T ss_pred cCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 45689999999965 35 59999997653 224555666665555555443
No 293
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=81.04 E-value=0.89 Score=34.97 Aligned_cols=25 Identities=44% Similarity=0.643 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~ 31 (169)
....|+|||||+-. +| .++||.+..
T Consensus 182 ~~C~GDSGgPL~~~~~g~~~l~Gi~S~g 209 (240)
T 1gvk_B 182 SGCQGDSGGPLHCLVNGQYAVHGVTSFV 209 (240)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCCcCceEEEECCcEEEEEEEEEe
Confidence 34689999999853 57 899998865
No 294
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=80.69 E-value=2.3 Score=33.16 Aligned_cols=46 Identities=24% Similarity=0.249 Sum_probs=30.2
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-.. | .++||.+.... ...+...-+.....-+++.
T Consensus 215 ~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 267 (276)
T 2jde_A 215 DSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 267 (276)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHT
T ss_pred cccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 456899999999533 3 49999997753 2245556666555555544
No 295
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=80.37 E-value=0.97 Score=34.60 Aligned_cols=25 Identities=40% Similarity=0.524 Sum_probs=19.7
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~ 31 (169)
....|+|||||+-. +| .++||.+..
T Consensus 181 ~~C~GDSGgPL~~~~~g~~~l~Gi~S~g 208 (236)
T 1elt_A 181 SGCNGDSGGPLNCQVNGSYYVHGVTSFV 208 (236)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred ccCCCCCCCeeEEEECCEEEEEEEEEEe
Confidence 34689999999964 56 799998864
No 296
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=79.82 E-value=1.9 Score=33.32 Aligned_cols=50 Identities=26% Similarity=0.321 Sum_probs=33.3
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~~g 56 (169)
....|+|||||+.. +| .++||.+.... ...+...-+......+++..+..
T Consensus 186 ~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~~ 242 (254)
T 2bz6_H 186 DSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRSE 242 (254)
T ss_dssp BCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTSC
T ss_pred ccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHhcc
Confidence 35679999999964 45 58999997653 22455566666666666655443
No 297
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=79.43 E-value=2.3 Score=33.58 Aligned_cols=48 Identities=23% Similarity=0.277 Sum_probs=31.8
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhhh
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYKR 54 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~~ 54 (169)
....|+|||||+-.+ | .++||.+.... ...+...-+......+++..+
T Consensus 220 ~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 274 (283)
T 1yc0_A 220 DACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 274 (283)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred ccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHhc
Confidence 356899999999653 5 59999997653 224555666655555555443
No 298
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=79.22 E-value=3 Score=31.61 Aligned_cols=45 Identities=22% Similarity=0.308 Sum_probs=28.1
Q ss_pred ccCCCCccceEEcC-CccEEEEEeeec--c---CCeEEEEehhhHHHHHHh
Q psy18070 7 MVKFGNSGGPLVNL-DGEVIGINSMKV--T---AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G~vvGi~~~~~--~---~~~~faiP~~~i~~~l~~ 51 (169)
....|+|||||+-. ++.++||.+... . ...+...-+......+++
T Consensus 174 ~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~ 224 (230)
T 2hlc_A 174 SPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQ 224 (230)
T ss_dssp BCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHH
T ss_pred CcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHH
Confidence 45679999999943 348999998764 1 123434455544444443
No 299
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=79.13 E-value=3.1 Score=32.91 Aligned_cols=46 Identities=22% Similarity=0.239 Sum_probs=29.5
Q ss_pred ccCCCCccceEEcC---Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNL---DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~---~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
..-.|+|||||+-. +| .++||++.... ...+...-+......+++.
T Consensus 229 ~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~ 283 (289)
T 2bdy_A 229 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKV 283 (289)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHH
T ss_pred ccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHH
Confidence 45689999999954 34 58999997653 1245555555555544443
No 300
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=78.95 E-value=2.5 Score=35.03 Aligned_cols=47 Identities=23% Similarity=0.210 Sum_probs=30.1
Q ss_pred ccCCCCccceEEcCC-----c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhhh
Q psy18070 7 MVKFGNSGGPLVNLD-----G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 7 ~in~GnSGGplvn~~-----G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l~ 53 (169)
..-.|+|||||+-.+ | .++||.+.... ...+...-+......+.+.+
T Consensus 302 d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI~~~i 359 (372)
T 1z8g_A 302 DACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAI 359 (372)
T ss_dssp BCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 345799999999543 2 69999997653 22455555555555554443
No 301
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=78.59 E-value=3 Score=33.21 Aligned_cols=46 Identities=26% Similarity=0.306 Sum_probs=28.3
Q ss_pred ccCCCCccceEEcCC---c--cEEEEEeeecc----CCeEEEEehhhHHHHHHhh
Q psy18070 7 MVKFGNSGGPLVNLD---G--EVIGINSMKVT----AGISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 7 ~in~GnSGGplvn~~---G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~l 52 (169)
....|+|||||+-.+ | .++||++.... ...+...-+.....-+++.
T Consensus 193 ~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~ 247 (290)
T 1fiw_A 193 DTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASK 247 (290)
T ss_dssp BCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHH
T ss_pred eeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 456799999999644 2 59999997653 1234444444444444443
No 302
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=78.11 E-value=1.2 Score=33.78 Aligned_cols=25 Identities=32% Similarity=0.504 Sum_probs=19.1
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~ 31 (169)
....|+|||||+-.+ | .++||.+..
T Consensus 181 ~~C~GDsGgPl~~~~~~~~~l~Gi~S~g 208 (235)
T 4dgj_A 181 DSCQGDSGGPLMCQENNRWFLAGVTSFG 208 (235)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred ccCCCCCCCeEEEEECCcEEEEEEEEEc
Confidence 456899999999653 3 399998865
No 303
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=78.08 E-value=1.3 Score=33.56 Aligned_cols=26 Identities=42% Similarity=0.302 Sum_probs=19.4
Q ss_pred cccCCCCccceEEcC---Cc--cEEEEEeee
Q psy18070 6 IMVKFGNSGGPLVNL---DG--EVIGINSMK 31 (169)
Q Consensus 6 a~in~GnSGGplvn~---~G--~vvGi~~~~ 31 (169)
.....|+|||||+-. +| .++||.+..
T Consensus 182 ~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g 212 (242)
T 3tvj_B 182 KDSCRGDSGGALVFLDSETERWFVGGIVSWG 212 (242)
T ss_dssp SBCCTTCTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred CccccCCCCCeEEEEeCCCCcEEEEEEEEeC
Confidence 345689999999953 23 389998875
No 304
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=77.87 E-value=1.3 Score=33.87 Aligned_cols=25 Identities=44% Similarity=0.509 Sum_probs=19.1
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~ 31 (169)
....|+|||||+-.. | .++||.+..
T Consensus 192 ~~C~GDSGgPl~~~~~~~~~l~Gi~S~g 219 (247)
T 3mhw_U 192 DSCQGDSGGPLVCSLQGRMTLTGIVSWG 219 (247)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred ccCCCCCCCeEEEEECCCEEEEEEEEEC
Confidence 456899999999543 3 499998865
No 305
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=77.78 E-value=1.3 Score=34.34 Aligned_cols=26 Identities=46% Similarity=0.617 Sum_probs=20.1
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~ 32 (169)
....|+|||||+-. +| .++||.+...
T Consensus 194 ~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 222 (251)
T 1pyt_D 194 SACNGDSGGPLNCQADGQWDVRGIVSFGS 222 (251)
T ss_dssp CCCCSCTTCEEEEESSSSEEEEEEEEECC
T ss_pred ccCCCCCCCceEEEECCCEEEEEEEEECC
Confidence 35689999999954 45 6999988753
No 306
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=76.83 E-value=1.2 Score=34.35 Aligned_cols=26 Identities=50% Similarity=0.755 Sum_probs=20.0
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~ 32 (169)
....|+|||||+-. +| .++||.+...
T Consensus 197 ~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~ 225 (252)
T 1rtf_B 197 DACQGDSGGPLVCLNDGRMTLVGIISWGL 225 (252)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred ccccCCCcCceEEEeCCcEEEEEEEEEcC
Confidence 45679999999954 35 6999988653
No 307
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=76.78 E-value=1.3 Score=34.26 Aligned_cols=26 Identities=31% Similarity=0.526 Sum_probs=19.6
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~ 32 (169)
....|+|||||+-.+ | .++||.+...
T Consensus 191 ~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 219 (247)
T 1ddj_A 191 DSCQGDAGGPLVCFEKDKYILQGVTSWGL 219 (247)
T ss_dssp CBCCSCTTCEEEEECSSSEEEEEEECGGG
T ss_pred ccccCcCcCcEEEEECCcEEEEEEEEECC
Confidence 356899999999544 3 5999988653
No 308
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=76.69 E-value=1.5 Score=33.65 Aligned_cols=26 Identities=35% Similarity=0.464 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~ 32 (169)
....|+|||||+-.. | .++||.+...
T Consensus 182 ~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 210 (238)
T 3bg8_A 182 DACKGDSGGPLSCKHNEVWHLVGITSWGE 210 (238)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CcCCCCCCcceEEEECCeEEEEEEEEECC
Confidence 356899999999653 4 4999988653
No 309
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=76.52 E-value=1.4 Score=33.98 Aligned_cols=26 Identities=42% Similarity=0.656 Sum_probs=20.0
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~ 32 (169)
..-.|+|||||+-.+ | .++||.+...
T Consensus 189 ~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 217 (245)
T 1t8o_A 189 SSCMGDSGGPLVCKKNGAWTLVGIVSWGS 217 (245)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred ccCcccCcCCEEEEECCEEEEEEEEEeCC
Confidence 356899999999543 3 7999988654
No 310
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=75.83 E-value=3.8 Score=31.75 Aligned_cols=45 Identities=24% Similarity=0.285 Sum_probs=27.4
Q ss_pred cCCCCccceEEcCC-c--cEEEEEeeecc---CC-eEEEEehhhHHHHHHhh
Q psy18070 8 VKFGNSGGPLVNLD-G--EVIGINSMKVT---AG-ISFAIPIDYAIEFLTNY 52 (169)
Q Consensus 8 in~GnSGGplvn~~-G--~vvGi~~~~~~---~~-~~faiP~~~i~~~l~~l 52 (169)
...|+|||||+-.. | .++||.+.... .+ .+...-+.....-+++.
T Consensus 216 ~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~~~ 267 (276)
T 2vnt_A 216 SCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 267 (276)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred CCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHH
Confidence 46799999999432 3 39999987653 12 24344454444444443
No 311
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=73.77 E-value=2.1 Score=35.37 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=17.5
Q ss_pred CCCCccceEEc---CCcc--EEEEEeeec
Q psy18070 9 KFGNSGGPLVN---LDGE--VIGINSMKV 32 (169)
Q Consensus 9 n~GnSGGplvn---~~G~--vvGi~~~~~ 32 (169)
-.|+|||||+- .+|+ ++||++...
T Consensus 292 C~GDSGGPLv~~~~~~~~~~lvGIvS~G~ 320 (347)
T 4f4o_C 292 CYGDAGSAFAVHDKDDDTWYAAGILSFDK 320 (347)
T ss_dssp CTTCTTCEEEEEETTTTEEEEEEEEEECC
T ss_pred CCCCCCcceEEEeCCCCEEEEEEEEEeCC
Confidence 46999999983 2343 899988654
No 312
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=73.22 E-value=1.7 Score=33.15 Aligned_cols=26 Identities=38% Similarity=0.440 Sum_probs=19.7
Q ss_pred ccCCCCccceEEcC-Cc--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNL-DG--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~-~G--~vvGi~~~~~ 32 (169)
....|+|||||+-. +| .++||.+...
T Consensus 179 ~~C~GDsGgPl~~~~~~~~~l~GI~S~g~ 207 (235)
T 2wph_S 179 DSCQGDSGGPHVTEVEGTSFLTGIISWGE 207 (235)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred ccCCCCCCCceEEeECCeEEEEEEEEECC
Confidence 35689999999954 34 5899988654
No 313
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=73.22 E-value=3.9 Score=33.81 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=28.7
Q ss_pred ccCCCCccceEEcC---Cc--cEEEEEeeecc--CCeEEEEehhhHHHHHHh
Q psy18070 7 MVKFGNSGGPLVNL---DG--EVIGINSMKVT--AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 7 ~in~GnSGGplvn~---~G--~vvGi~~~~~~--~~~~faiP~~~i~~~l~~ 51 (169)
..-.|+|||||+-. +| .++||++.... .+.+...-+.....-+.+
T Consensus 342 d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~ 393 (399)
T 1gpz_A 342 DACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKK 393 (399)
T ss_dssp GGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHH
T ss_pred ccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHH
Confidence 35679999999843 23 48999987653 334555555554444444
No 314
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=73.15 E-value=1.7 Score=34.03 Aligned_cols=24 Identities=33% Similarity=0.443 Sum_probs=18.8
Q ss_pred cCCCCccceEEcC--Cc--cEEEEEeee
Q psy18070 8 VKFGNSGGPLVNL--DG--EVIGINSMK 31 (169)
Q Consensus 8 in~GnSGGplvn~--~G--~vvGi~~~~ 31 (169)
...|+|||||+-. +| .++||.+..
T Consensus 223 ~C~GDSGGPL~~~~~~~~~~l~GIvS~g 250 (278)
T 2olg_A 223 SCGGDSGGPLLAERANQQFFLEGLVSFG 250 (278)
T ss_dssp CCCCCTTCEEEEEEGGGEEEEEEEEEEC
T ss_pred eCCCccCcceEEEcCCCcEEEEEEEEEC
Confidence 4689999999964 34 589998865
No 315
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=72.33 E-value=7.2 Score=30.84 Aligned_cols=48 Identities=31% Similarity=0.442 Sum_probs=34.6
Q ss_pred cccCCCCccceEEcCC-ccEEEEEeeecc-CCeEEEEehhh-HHHHHHhhh
Q psy18070 6 IMVKFGNSGGPLVNLD-GEVIGINSMKVT-AGISFAIPIDY-AIEFLTNYK 53 (169)
Q Consensus 6 a~in~GnSGGplvn~~-G~vvGi~~~~~~-~~~~faiP~~~-i~~~l~~l~ 53 (169)
.+..+|.=|.|+|+.. |.+||+-++... ..-+|+.|... ...+|....
T Consensus 152 IsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~~~~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 152 IQTKDGQCGSPLVSTRDGFIVGIHSASNFTNTNNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp BCCCTTCTTCEEEETTTCCEEEEEEEEETTSCSEEEEECCTTHHHHHHCGG
T ss_pred eeCCCCcCCCcEEECCCCcEEEEEcccccCCCeEEEeCCCHHHHHHHhccc
Confidence 4678999999999975 999999998764 34566666543 226665543
No 316
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=71.82 E-value=4.8 Score=36.25 Aligned_cols=39 Identities=23% Similarity=0.407 Sum_probs=31.5
Q ss_pred EeeccccCCCCccceEEcCCccEEEEEeeeccCCeEEEEeh
Q psy18070 2 SLTGIMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFAIPI 42 (169)
Q Consensus 2 iq~da~in~GnSGGplvn~~G~vvGi~~~~~~~~~~faiP~ 42 (169)
+.-+++..+|.-|+||+. +|+||||-+++. ...|||-++
T Consensus 136 ~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~-g~~g~a~~l 174 (644)
T 2ijd_1 136 LMYNFPTRAGQAGGVITC-TGKVIGMHVGGN-GSHGFAAAL 174 (644)
T ss_dssp EEECSCCCTTCTTCEEEE-TTEEEEEEEEEC-SSCEEEEEC
T ss_pred EEEcCCCCCCCCCchhhh-CCcEEEEEEcCC-CCceEEEEc
Confidence 345788899999999995 899999999884 446787775
No 317
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=71.44 E-value=3.8 Score=36.57 Aligned_cols=49 Identities=24% Similarity=0.358 Sum_probs=32.2
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeeec--c--C-----Ce-----EEEEehhhHHHHHHhhhhc
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMKV--T--A-----GI-----SFAIPIDYAIEFLTNYKRK 55 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~~--~--~-----~~-----~faiP~~~i~~~l~~l~~~ 55 (169)
..-.|+|||||+-.+. .++||++... . . .. ++..-+......+++.++.
T Consensus 668 ~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~ 733 (741)
T 3hrz_D 668 NTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD 733 (741)
T ss_dssp CCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred CcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence 3567999999995432 2999999876 1 1 11 5556676666666665544
No 318
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=70.56 E-value=8.4 Score=31.03 Aligned_cols=46 Identities=15% Similarity=0.204 Sum_probs=29.6
Q ss_pred cCCCCccceEEcCC---c---cEEEEEeeecc-CCeEEEEehhhHHHHHHhhh
Q psy18070 8 VKFGNSGGPLVNLD---G---EVIGINSMKVT-AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 8 in~GnSGGplvn~~---G---~vvGi~~~~~~-~~~~faiP~~~i~~~l~~l~ 53 (169)
.-.|+|||||+-.+ | .++||++.... ...+...-+.....-+.+..
T Consensus 272 ~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~~~vyt~V~~y~~WI~~~~ 324 (333)
T 1elv_A 272 SCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTYGLYTRVKNYVDWIMKTM 324 (333)
T ss_dssp CCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTSEEEEEEGGGGHHHHHHHH
T ss_pred cCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCCCCcEEeEHHHHHHHHHHHH
Confidence 46799999999642 3 48999997753 22455555555555554443
No 319
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=68.38 E-value=4.5 Score=34.12 Aligned_cols=43 Identities=23% Similarity=0.257 Sum_probs=26.9
Q ss_pred ccCCCCccceEEcC---Cc--cEEEEEeeecc----CCeEEEEehhhHHHHH
Q psy18070 7 MVKFGNSGGPLVNL---DG--EVIGINSMKVT----AGISFAIPIDYAIEFL 49 (169)
Q Consensus 7 ~in~GnSGGplvn~---~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l 49 (169)
..-.|.|||||+-. +| .++||++.... ...+...-+.....-+
T Consensus 364 d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs~y~~WI 415 (424)
T 3nxp_A 364 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI 415 (424)
T ss_dssp CTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECTTCHHHH
T ss_pred ccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHH
Confidence 45689999999954 34 58999997653 1234445444433333
No 320
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=67.54 E-value=2.6 Score=34.32 Aligned_cols=26 Identities=31% Similarity=0.332 Sum_probs=19.1
Q ss_pred ccCCCCccceEEcCC---c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD---G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~---G--~vvGi~~~~~ 32 (169)
..-.|+|||||+-.+ | .++||++...
T Consensus 274 d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~ 304 (329)
T 1md8_A 274 DACQGDSGGVFAVRDPNTDRWVATGIVSWGI 304 (329)
T ss_dssp BCCTTTTTCEEEEEETTTTEEEEEEEEEECS
T ss_pred cCCCCccccceEEEECCCCcEEEEEEEEECC
Confidence 456899999999532 2 4899988653
No 321
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=66.19 E-value=7.7 Score=30.54 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=27.4
Q ss_pred CCCCccceEEcC-Ccc--EEEEEeeecc---CCeEEEEehhhHHHHHHhhh
Q psy18070 9 KFGNSGGPLVNL-DGE--VIGINSMKVT---AGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 9 n~GnSGGplvn~-~G~--vvGi~~~~~~---~~~~faiP~~~i~~~l~~l~ 53 (169)
..|.|||||+-. +|+ ++||++.... ...+...-+.....-+++..
T Consensus 225 ~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~ 275 (283)
T 3f1s_B 225 MHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIM 275 (283)
T ss_dssp GGBCTTCEEEEECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHH
T ss_pred CCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHh
Confidence 368999999964 455 9999976432 12344455554444444433
No 322
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=64.51 E-value=5.2 Score=32.13 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=25.2
Q ss_pred cceEEcCCccEEEEEeeecc------CCeEEEEehhhHH
Q psy18070 14 GGPLVNLDGEVIGINSMKVT------AGISFAIPIDYAI 46 (169)
Q Consensus 14 GGplvn~~G~vvGi~~~~~~------~~~~faiP~~~i~ 46 (169)
-||++|.+|+|+|+.+.-.+ +-.|||+-+..+.
T Consensus 147 EgPv~~~~gkVvGw~~~w~~~R~fpiDmAGFA~N~~lll 185 (253)
T 1v84_A 147 EAPRVNGAGKVVRWKTVFDPHRPFAIDMAGFAVNLRLIL 185 (253)
T ss_dssp EEEEECTTSCEEEEECSSCTTSTTCCCGGGEEEEHHHHH
T ss_pred ecCeECCCCCEeeeecccCCCCCccceeeeeEEEehhhh
Confidence 37999999999999986432 3358999887543
No 323
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=63.98 E-value=6.3 Score=33.08 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=27.5
Q ss_pred ccCCCCccceEEcC----Cc--cEEEEEeeecc----CCeEEEEehhhHHHHHHh
Q psy18070 7 MVKFGNSGGPLVNL----DG--EVIGINSMKVT----AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 7 ~in~GnSGGplvn~----~G--~vvGi~~~~~~----~~~~faiP~~~i~~~l~~ 51 (169)
..-.|+|||||+-. +| .++||++.... ...+...-+.....-+++
T Consensus 326 d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y~~WI~~ 380 (394)
T 2b9l_A 326 DTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQ 380 (394)
T ss_dssp SCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGGHHHHHH
T ss_pred cCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHH
Confidence 34679999999953 24 68999987653 123444444444444433
No 324
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=61.22 E-value=8.4 Score=33.85 Aligned_cols=44 Identities=23% Similarity=0.315 Sum_probs=22.3
Q ss_pred cCCCCccceEEcC--Ccc--EEEEEeeecc----CCeEEEEehhhHHHHHHh
Q psy18070 8 VKFGNSGGPLVNL--DGE--VIGINSMKVT----AGISFAIPIDYAIEFLTN 51 (169)
Q Consensus 8 in~GnSGGplvn~--~G~--vvGi~~~~~~----~~~~faiP~~~i~~~l~~ 51 (169)
.-.|+|||||+-. +|+ ++||++.... ...+...-+.....-+.+
T Consensus 502 ~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~ 553 (565)
T 2xrc_A 502 ACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISY 553 (565)
T ss_dssp -----CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHH
T ss_pred cCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHH
Confidence 4569999999953 453 8999987653 123444555544444444
No 325
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=60.58 E-value=3.4 Score=35.24 Aligned_cols=26 Identities=23% Similarity=0.201 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcCCc---cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLDG---EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~G---~vvGi~~~~~ 32 (169)
....|+|||||+-..+ .++||++...
T Consensus 430 ~~C~GDSGGPL~~~~~~~~~l~GIvS~G~ 458 (509)
T 2odp_A 430 SPCKGESGGAVFLERRFRFFQVGLVSWGL 458 (509)
T ss_dssp CCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred cccCCCccCceEEEECCeEEEEEEEEEcC
Confidence 3567999999995432 3999999775
No 326
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=59.48 E-value=4 Score=34.55 Aligned_cols=26 Identities=35% Similarity=0.473 Sum_probs=19.8
Q ss_pred ccCCCCccceEEcCC-c--cEEEEEeeec
Q psy18070 7 MVKFGNSGGPLVNLD-G--EVIGINSMKV 32 (169)
Q Consensus 7 ~in~GnSGGplvn~~-G--~vvGi~~~~~ 32 (169)
....|+|||||+-.. | .++||++...
T Consensus 426 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~ 454 (497)
T 1rrk_A 426 NTCRGDSGGPLIVHKRSRFIQVGVISWGV 454 (497)
T ss_dssp CCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred cCCCCCCCCeeEEEeCCEEEEEEEEEecC
Confidence 456799999999543 3 3899999775
No 327
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=59.00 E-value=5.6 Score=28.44 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=14.0
Q ss_pred ceEEcCCccEEEEEee
Q psy18070 15 GPLVNLDGEVIGINSM 30 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~ 30 (169)
-|++|.+|+++||.+.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 5899999999999774
No 328
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=58.77 E-value=4.8 Score=33.38 Aligned_cols=25 Identities=44% Similarity=0.341 Sum_probs=19.1
Q ss_pred ccCCCCccceEEcC---Cc--cEEEEEeee
Q psy18070 7 MVKFGNSGGPLVNL---DG--EVIGINSMK 31 (169)
Q Consensus 7 ~in~GnSGGplvn~---~G--~vvGi~~~~ 31 (169)
..-.|+|||||+-. +| .++||++..
T Consensus 344 ~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g 373 (403)
T 1zjk_A 344 DSCRGDSGGALVFLDSETERWFVGGIVSWG 373 (403)
T ss_dssp TSCSCSTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred CCCcCCCCccEEEEECCCCcEEEEEEEEEC
Confidence 45679999999964 23 489998876
No 329
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=58.74 E-value=6.4 Score=28.14 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=18.6
Q ss_pred CCCccceEEcCCccEEEEEeee
Q psy18070 10 FGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.+-++-|++|.+|+++|+.+..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 4567889999999999998854
No 330
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=57.05 E-value=6.4 Score=27.00 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=16.1
Q ss_pred CccceEEcCCccEEEEEeee
Q psy18070 12 NSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 12 nSGGplvn~~G~vvGi~~~~ 31 (169)
-.--|++|.+|+++|+.+..
T Consensus 100 ~~~~~Vvd~~g~lvGiit~~ 119 (136)
T 3lfr_A 100 NHMAIVIDEYGGVAGLVTIE 119 (136)
T ss_dssp CCEEEEECTTSCEEEEEEHH
T ss_pred CeEEEEEeCCCCEEEEEEHH
Confidence 34568999999999998753
No 331
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=55.51 E-value=5.2 Score=31.96 Aligned_cols=23 Identities=13% Similarity=0.159 Sum_probs=17.4
Q ss_pred cCCCCccceEEcC-Ccc--EEEEEee
Q psy18070 8 VKFGNSGGPLVNL-DGE--VIGINSM 30 (169)
Q Consensus 8 in~GnSGGplvn~-~G~--vvGi~~~ 30 (169)
...|+|||||+-. +|+ ++||++.
T Consensus 265 ~~~gDsGgPl~~~~~~~~~l~Gi~S~ 290 (317)
T 3h5c_B 265 AMHWMDGSVVTREHRGSWFLTGVLGS 290 (317)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECC
T ss_pred CcCCCCCCCEEEecCCEEEEEEEEEE
Confidence 3478999999964 344 8999864
No 332
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=54.46 E-value=5.9 Score=35.32 Aligned_cols=25 Identities=36% Similarity=0.546 Sum_probs=18.0
Q ss_pred cCCCCccceEEcC-Cc--cEEEEEeeec
Q psy18070 8 VKFGNSGGPLVNL-DG--EVIGINSMKV 32 (169)
Q Consensus 8 in~GnSGGplvn~-~G--~vvGi~~~~~ 32 (169)
.-.|+|||||+-. +| .++||++...
T Consensus 570 ~C~GDSGGPLv~~~~~~~~lvGIvS~G~ 597 (625)
T 2f83_A 570 ACKGDSGGPLSCKHNEVWHLVGITSWGE 597 (625)
T ss_dssp --CCCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CCCCCcccceEEEECCeEEEEEEEEeCC
Confidence 4579999999954 35 5899988653
No 333
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=53.18 E-value=8.5 Score=31.33 Aligned_cols=31 Identities=29% Similarity=0.554 Sum_probs=24.1
Q ss_pred ceEEcCCccEEEEEeeecc------CCeEEEEehhhHH
Q psy18070 15 GPLVNLDGEVIGINSMKVT------AGISFAIPIDYAI 46 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~~~~------~~~~faiP~~~i~ 46 (169)
||++| +|+|+|+.+.-.. +-.|||+-+.++-
T Consensus 174 gPvc~-~gkVvGw~t~w~~~R~fpiDMAGFA~N~~lL~ 210 (281)
T 3cu0_A 174 GPQVQ-DGRVVGFHTAWEPSRPFPVDMAGFAVALPLLL 210 (281)
T ss_dssp EEEEE-TTEEEEEECCSSTTCSSCCCGGGEEEEHHHHH
T ss_pred EEEEe-CCEEeeeeccCCCCCCCccccceeEeehhhhh
Confidence 79998 8999999986543 3358999887654
No 334
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=52.36 E-value=8.9 Score=25.29 Aligned_cols=20 Identities=35% Similarity=0.429 Sum_probs=16.1
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+--|++|.+|+++|+.+.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44557999999999999764
No 335
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=51.49 E-value=9.2 Score=30.51 Aligned_cols=30 Identities=27% Similarity=0.428 Sum_probs=23.2
Q ss_pred ceEEcCCccEEEEEeeecc------CCeEEEEehhhH
Q psy18070 15 GPLVNLDGEVIGINSMKVT------AGISFAIPIDYA 45 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~~~~------~~~~faiP~~~i 45 (169)
||+++ +|+|+|+.+.-.. +-.|||+-+..+
T Consensus 142 gPv~~-~gkVvGw~t~w~~~R~fpiDmAGFA~N~~ll 177 (246)
T 2d0j_A 142 RPLVE-NGKVVGWYTGWRADRPFAIDMAGFAVSLQVI 177 (246)
T ss_dssp EEEEE-TTEEEEEECSSCTTSTTCCCGGGEEEEHHHH
T ss_pred cceee-CCEecceecccCCCCcCcccceeeEeehhhh
Confidence 69998 9999999986543 335899987654
No 336
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=49.82 E-value=10 Score=25.51 Aligned_cols=20 Identities=30% Similarity=0.381 Sum_probs=15.8
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+--|++|.+|+++|+.+.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 34456999999999999764
No 337
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=49.50 E-value=9.6 Score=28.64 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=15.9
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-.--|++|.+|+++|+.+.
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEEcCCCeEEEEEEH
Confidence 34456999999999999663
No 338
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=49.34 E-value=25 Score=27.09 Aligned_cols=39 Identities=31% Similarity=0.572 Sum_probs=28.3
Q ss_pred CCCCccceEEcCCccEEEEEeeec-cC----CeEEEEehhhHHHH
Q psy18070 9 KFGNSGGPLVNLDGEVIGINSMKV-TA----GISFAIPIDYAIEF 48 (169)
Q Consensus 9 n~GnSGGplvn~~G~vvGi~~~~~-~~----~~~faiP~~~i~~~ 48 (169)
-.|.||+||+-..|++||+-.+.. .. .+-| +|.+.+..-
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~~ 189 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLETT 189 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eeccccccc
Confidence 357799999999999999866644 22 3556 898765443
No 339
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=49.30 E-value=10 Score=26.37 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=13.6
Q ss_pred ceEEcCCccEEEEEee
Q psy18070 15 GPLVNLDGEVIGINSM 30 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~ 30 (169)
-|++|.+|+++|+.+.
T Consensus 118 lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEET
T ss_pred EEEEcCCCeEEEEEEH
Confidence 5899999999999663
No 340
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=48.23 E-value=25 Score=25.73 Aligned_cols=33 Identities=27% Similarity=0.360 Sum_probs=26.0
Q ss_pred cccCCCCccceEEcCCccEEEEEeeeccCCeEEE
Q psy18070 6 IMVKFGNSGGPLVNLDGEVIGINSMKVTAGISFA 39 (169)
Q Consensus 6 a~in~GnSGGplvn~~G~vvGi~~~~~~~~~~fa 39 (169)
....||.=||.|. ...-||||+++....-.+|+
T Consensus 99 G~~epGDCGG~L~-C~HGviGivTaGG~g~VaF~ 131 (142)
T 2hrv_A 99 GPCEPGDCGGKLL-CKHGVIGIVTAGGDNHVAFI 131 (142)
T ss_dssp CCCCTTCTTCEEE-ETTEEEEEEEEECSSEEEEE
T ss_pred cCCCCCCCCceee-eCCCceEEEecCCCCEEEEE
Confidence 4668999999999 56679999999875435665
No 341
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=48.03 E-value=11 Score=25.71 Aligned_cols=20 Identities=30% Similarity=0.481 Sum_probs=16.1
Q ss_pred CccceEEcCCccEEEEEeee
Q psy18070 12 NSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 12 nSGGplvn~~G~vvGi~~~~ 31 (169)
-+--|++|.+|+++|+.+..
T Consensus 101 ~~~l~Vvd~~g~~~Giit~~ 120 (141)
T 2rih_A 101 IRHVVVVNKNGELVGVLSIR 120 (141)
T ss_dssp CSEEEEECTTSCEEEEEEHH
T ss_pred CeEEEEEcCCCcEEEEEEHH
Confidence 34569999999999998754
No 342
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=47.56 E-value=11 Score=26.63 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=16.6
Q ss_pred CCCccceEEcCCccEEEEEee
Q psy18070 10 FGNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~ 30 (169)
.+-+--|++|.+|+++|+.+.
T Consensus 127 ~~~~~lpVvd~~g~~vGiit~ 147 (180)
T 3sl7_A 127 TKFRRLPVVDADGKLIGILTR 147 (180)
T ss_dssp STTCEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEECCCCeEEEEEEH
Confidence 344567999999999999663
No 343
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=46.45 E-value=14 Score=26.26 Aligned_cols=24 Identities=13% Similarity=0.303 Sum_probs=18.9
Q ss_pred cCCCCccceEEcCCccEEEEEeee
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
...|-|+=|++|.+|+++|+.+..
T Consensus 44 ~~~~~s~~pVvd~~~~lvGiit~~ 67 (156)
T 3k6e_A 44 SQMTYTRVPVVTDEKQFVGTIGLR 67 (156)
T ss_dssp TTSSSSEEEEECC-CBEEEEEEHH
T ss_pred HHcCCcEEEEEcCCCcEEEEEEec
Confidence 346778999999999999998743
No 344
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=45.20 E-value=13 Score=25.77 Aligned_cols=16 Identities=31% Similarity=0.179 Sum_probs=13.7
Q ss_pred ceEEcCCccEEEEEee
Q psy18070 15 GPLVNLDGEVIGINSM 30 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~ 30 (169)
-|++|.+|+++|+.+.
T Consensus 115 l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 115 VCVENDDGYFAGIFTR 130 (157)
T ss_dssp EEEECSSSSEEEEEEH
T ss_pred EEEEcCCCeEEEEEEH
Confidence 5899999999999663
No 345
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=44.96 E-value=22 Score=29.84 Aligned_cols=44 Identities=27% Similarity=0.363 Sum_probs=26.0
Q ss_pred cCCCCccceE------EcC-Cc--cEEEEEeee-cc---CC-eEEEEehhhHHHHHHh
Q psy18070 8 VKFGNSGGPL------VNL-DG--EVIGINSMK-VT---AG-ISFAIPIDYAIEFLTN 51 (169)
Q Consensus 8 in~GnSGGpl------vn~-~G--~vvGi~~~~-~~---~~-~~faiP~~~i~~~l~~ 51 (169)
.-.|+||||| +-. +| .++||++.. .. .+ .+...-+.....-+++
T Consensus 313 ~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~ 370 (408)
T 2xxl_A 313 SCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITD 370 (408)
T ss_dssp GGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHH
T ss_pred cCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 4579999999 432 33 689999987 32 12 3444445444444433
No 346
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=43.57 E-value=14 Score=25.76 Aligned_cols=16 Identities=19% Similarity=-0.043 Sum_probs=13.8
Q ss_pred ceEEcCCccEEEEEee
Q psy18070 15 GPLVNLDGEVIGINSM 30 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~ 30 (169)
=|++|.+|+++|+.+.
T Consensus 118 lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 118 VCVENDEQVFEGIFTR 133 (159)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEEeCCCeEEEEEEH
Confidence 6899999999999764
No 347
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=43.48 E-value=8 Score=35.71 Aligned_cols=25 Identities=36% Similarity=0.586 Sum_probs=18.5
Q ss_pred cCCCCccceEEcCCc---cEEEEEeeec
Q psy18070 8 VKFGNSGGPLVNLDG---EVIGINSMKV 32 (169)
Q Consensus 8 in~GnSGGplvn~~G---~vvGi~~~~~ 32 (169)
.-.|+|||||+-.++ .++||++...
T Consensus 736 aC~GDSGGPLv~~~~~~~~LvGIvS~G~ 763 (791)
T 4dur_A 736 SCQGDSGGPLVCFEKDKYILQGVTSWGL 763 (791)
T ss_dssp BCCSCTTCEEEEEETTEEEEEEECCTTT
T ss_pred CCCCCcccceEEEeCCeEEEEEEEEeCC
Confidence 457999999995433 4899987643
No 348
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=41.01 E-value=16 Score=21.57 Aligned_cols=20 Identities=10% Similarity=0.194 Sum_probs=15.7
Q ss_pred CCCccceEEcCCccEEEEEee
Q psy18070 10 FGNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~ 30 (169)
.+-+.=|++|. |+++|+.+.
T Consensus 21 ~~~~~~pV~d~-~~l~Givt~ 40 (70)
T 3fio_A 21 NKAGSAVVMEG-DEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEET-TEEEEEEEH
T ss_pred cCCCEEEEEEC-CEEEEEEEH
Confidence 34567799986 999999774
No 349
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=39.84 E-value=18 Score=24.98 Aligned_cols=20 Identities=20% Similarity=0.164 Sum_probs=16.5
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 60 ~~~~~~Vvd~~~~~~Givt~ 79 (149)
T 3k2v_A 60 NLGMTAICDDDMNIIGIFTD 79 (149)
T ss_dssp TSSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCcEEEEecH
Confidence 44667999999999999774
No 350
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=39.01 E-value=21 Score=24.40 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=16.8
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 47 ~~~~~pVvd~~~~~~Givt~ 66 (150)
T 3lqn_A 47 GYSAIPVLDPMYKLHGLIST 66 (150)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCCEEEEEEH
Confidence 45677999999999999774
No 351
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=37.97 E-value=23 Score=24.47 Aligned_cols=21 Identities=33% Similarity=0.343 Sum_probs=17.2
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.-|++|.+|+++|+.+..
T Consensus 51 ~~~~~pVvd~~~~~vGivt~~ 71 (152)
T 2uv4_A 51 RVSALPVVDEKGRVVDIYSKF 71 (152)
T ss_dssp CCSEEEEECTTSBEEEEEEHH
T ss_pred CCceEeEECCCCcEEEEEeHH
Confidence 456789999999999997743
No 352
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=37.39 E-value=22 Score=24.57 Aligned_cols=22 Identities=14% Similarity=0.305 Sum_probs=17.0
Q ss_pred CCCCccceEEcCCccEEEEEee
Q psy18070 9 KFGNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 9 n~GnSGGplvn~~G~vvGi~~~ 30 (169)
..+-+.-|++|.+|+++|+.+.
T Consensus 45 ~~~~~~~~Vvd~~~~~~Giit~ 66 (156)
T 3ctu_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TCSSSEEEEECC-CBEEEEEEH
T ss_pred HCCCceEeEECCCCEEEEEEcH
Confidence 3456788999999999999764
No 353
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=36.84 E-value=24 Score=24.49 Aligned_cols=21 Identities=14% Similarity=0.279 Sum_probs=17.2
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.-|++|.+|+++|+.+..
T Consensus 46 ~~~~~pVvd~~~~lvGivt~~ 66 (159)
T 1yav_A 46 GYTAIPVLDPSYRLHGLIGTN 66 (159)
T ss_dssp CCSEEEEECTTCBEEEEEEHH
T ss_pred CCcEEEEECCCCCEEEEeEHH
Confidence 456789999999999997743
No 354
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=36.37 E-value=19 Score=24.94 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=13.8
Q ss_pred ccceEEcCCccEEEEEee
Q psy18070 13 SGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 13 SGGplvn~~G~vvGi~~~ 30 (169)
+-=|++| +|+++|+.+.
T Consensus 110 ~~lpVvd-~g~~~Giit~ 126 (157)
T 4fry_A 110 RHLPVLD-GGKLIGLISI 126 (157)
T ss_dssp SEEEEEE-TTEEEEEEEH
T ss_pred CEEEEEE-CCEEEEEEEH
Confidence 4569999 8999999663
No 355
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=35.75 E-value=25 Score=24.57 Aligned_cols=20 Identities=25% Similarity=0.396 Sum_probs=16.7
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 35 ~~~~~pVvd~~~~lvGivt~ 54 (160)
T 2o16_A 35 DIRHVPIVDANKKLLGIVSQ 54 (160)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCEEEEEcCCCcEEEEEeH
Confidence 45678999999999999774
No 356
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=35.67 E-value=20 Score=27.89 Aligned_cols=20 Identities=25% Similarity=0.486 Sum_probs=16.0
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+--|++|.+|+++|+.+.
T Consensus 229 ~~~~lpVvd~~g~lvGivT~ 248 (278)
T 2yvy_A 229 DFTVLPVVDEEGRLVGIVTV 248 (278)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEEeCCCeEEEEEEH
Confidence 34457999999999999763
No 357
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=35.21 E-value=27 Score=23.43 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=16.6
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 37 ~~~~~~Vvd~~~~~~Givt~ 56 (138)
T 2yzi_A 37 DVGSLVVINDDGNVVGFFTK 56 (138)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEEcCCCcEEEEEeH
Confidence 45677999999999999774
No 358
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=34.77 E-value=22 Score=26.84 Aligned_cols=21 Identities=14% Similarity=0.257 Sum_probs=17.1
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.=|++|.+|+++|+.+..
T Consensus 37 ~~~~lpVvd~~~~l~Giit~~ 57 (245)
T 3l2b_A 37 NLKSIPVADGNNHLLGMLSTS 57 (245)
T ss_dssp TCSEEEEECTTCBEEEEEEHH
T ss_pred CCCEEEEEcCCCEEEEEEEHH
Confidence 445679999999999998753
No 359
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=34.36 E-value=28 Score=23.21 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=16.7
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 38 ~~~~~~Vvd~~~~~~Givt~ 57 (138)
T 2p9m_A 38 KISSLPVIDDENKVIGIVTT 57 (138)
T ss_dssp TCCEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCeEEEEEEH
Confidence 45678999999999999774
No 360
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=33.82 E-value=23 Score=27.93 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=14.9
Q ss_pred ccceEEcCCccEEEEEee
Q psy18070 13 SGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 13 SGGplvn~~G~vvGi~~~ 30 (169)
+--|++|.+|+++|+.+.
T Consensus 233 ~~lpVVd~~g~lvGiIT~ 250 (286)
T 2oux_A 233 LAVPVTDYDDHLLGIVTV 250 (286)
T ss_dssp SEEEEECTTCBEEEEEEH
T ss_pred cEEEEEcCCCeEEEEEEH
Confidence 456999999999999663
No 361
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=33.71 E-value=29 Score=23.42 Aligned_cols=22 Identities=23% Similarity=0.289 Sum_probs=18.2
Q ss_pred CCCccceEEcCCccEEEEEeee
Q psy18070 10 FGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.+-+.-|++|.+|+++|+.+..
T Consensus 36 ~~~~~~~Vvd~~~~~~G~vt~~ 57 (152)
T 4gqw_A 36 NRITGFPVIDEDWKLVGLVSDY 57 (152)
T ss_dssp TTCSEEEEECTTCBEEEEEEHH
T ss_pred cCCceEEEEeCCCeEEEEEEHH
Confidence 3567789999999999998854
No 362
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=33.63 E-value=24 Score=25.32 Aligned_cols=21 Identities=29% Similarity=0.479 Sum_probs=16.9
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+--|++|.+|+++|+.+..
T Consensus 105 ~~~~lpVvd~~g~~~Givt~~ 125 (184)
T 1pvm_A 105 GLERCAVVDDPGRVVGIVTLT 125 (184)
T ss_dssp TCSEEEEECTTCCEEEEEEHH
T ss_pred CCcEEEEEcCCCeEEEEEEHH
Confidence 344569999889999998864
No 363
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=33.09 E-value=31 Score=23.12 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=17.1
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.-|++|.+|+++|+.+..
T Consensus 41 ~~~~~~Vvd~~~~~~Givt~~ 61 (144)
T 2nyc_A 41 RVSSVPIIDENGYLINVYEAY 61 (144)
T ss_dssp TCSEEEEECTTCBEEEEEEHH
T ss_pred CcceeeEEcCCCcEEEEEcHH
Confidence 456679999999999998753
No 364
>1koe_A Endostatin; angiogenesis inhibitor, collagen XVIII, non-collageneous domain, heparin-binding domain; 1.50A {Mus musculus} SCOP: d.169.1.5 PDB: 1dy0_A 1dy1_A 1bnl_A
Probab=32.87 E-value=16 Score=27.58 Aligned_cols=22 Identities=32% Similarity=0.489 Sum_probs=17.3
Q ss_pred ccccCCCC-ccceEEcCCccEEE
Q psy18070 5 GIMVKFGN-SGGPLVNLDGEVIG 26 (169)
Q Consensus 5 da~in~Gn-SGGplvn~~G~vvG 26 (169)
+..+++.. .++|++|+.|+|+-
T Consensus 52 ~~iV~~~DR~~~P~vNlkGevLf 74 (172)
T 1koe_A 52 YSIVRRADRGSVPIVNLKDEVLS 74 (172)
T ss_dssp GGGSCGGGTTTCCEECTTCCEEE
T ss_pred ccccchhhccCCCcEeccCcEEe
Confidence 45566666 37999999999994
No 365
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=32.68 E-value=32 Score=30.12 Aligned_cols=29 Identities=21% Similarity=0.180 Sum_probs=20.8
Q ss_pred EEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 100 RVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 100 ~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
-..+|.|.. .| .||||||++ +.-|++.++
T Consensus 321 ~~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 351 (503)
T 1gyt_A 321 AGCENMPGG------RA-YRPGDVLTTMSGQTVEVLNT 351 (503)
T ss_dssp EEEEECCST------TC-CCTTCEEECTTSCEEECSCT
T ss_pred EeeccCCCC------CC-CCCCCEEEeCCCcEEEecCC
Confidence 334577777 55 899999999 556666555
No 366
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=32.61 E-value=17 Score=23.86 Aligned_cols=18 Identities=17% Similarity=0.218 Sum_probs=13.3
Q ss_pred cCCccccccccccc-CCCCCcEEEe
Q psy18070 103 YNSPAYFIKFRTSA-GIKPTSSRLL 126 (169)
Q Consensus 103 ~~spA~~~~~~~~a-GL~~GDvI~~ 126 (169)
...|++ +. |+++||||--
T Consensus 39 ~~DPva------r~~G~k~GdVvkI 57 (78)
T 1hmj_A 39 EDDPVI------QEIGAKEGDVVRV 57 (78)
T ss_pred CcCHhh------HHhCCCCCCEEEE
Confidence 355777 65 9999999743
No 367
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=32.03 E-value=31 Score=24.14 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=17.7
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-++=|++|.+|+++|+.+..
T Consensus 36 ~~~~~pVvd~~~~~~Givt~~ 56 (180)
T 3sl7_A 36 KVTGLPVIDDNWTLVGVVSDY 56 (180)
T ss_dssp TCSEEEEECTTCBEEEEEEHH
T ss_pred CCCeEEEECCCCeEEEEEEHH
Confidence 456789999999999998854
No 368
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=32.01 E-value=67 Score=23.26 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=22.4
Q ss_pred ceEEcCCccEEEEEeeeccCCeEEEEehhhHHHHHHhhh
Q psy18070 15 GPLVNLDGEVIGINSMKVTAGISFAIPIDYAIEFLTNYK 53 (169)
Q Consensus 15 Gplvn~~G~vvGi~~~~~~~~~~faiP~~~i~~~l~~l~ 53 (169)
-|+.+.+|+++|+.. ..++.+.+.+++..+.
T Consensus 130 ~pi~~~~g~~~Gvl~--------~~i~l~~l~~~~~~~~ 160 (217)
T 4dah_A 130 VPVLDSKRNVTDYLV--------AAIQIDYLKNLINLLS 160 (217)
T ss_dssp EEEECTTSCEEEEEE--------EEEEHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEEE--------EEEcHHHHHHHHHhcC
Confidence 366677888888855 4577888888777663
No 369
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=31.96 E-value=32 Score=22.81 Aligned_cols=21 Identities=29% Similarity=0.360 Sum_probs=17.5
Q ss_pred CCccceEEcCC-ccEEEEEeee
Q psy18070 11 GNSGGPLVNLD-GEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~-G~vvGi~~~~ 31 (169)
+-+.-|++|.+ |+++|+.+..
T Consensus 35 ~~~~~pVvd~~~~~~vGivt~~ 56 (127)
T 3nqr_A 35 AHSRFPVISEDKDHIEGILMAK 56 (127)
T ss_dssp CCSEEEEESSSTTCEEEEEEGG
T ss_pred CCCEEEEEcCCCCcEEEEEEHH
Confidence 45678999988 8999998854
No 370
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=31.70 E-value=34 Score=29.87 Aligned_cols=28 Identities=25% Similarity=0.209 Sum_probs=20.7
Q ss_pred EccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 101 VMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 101 V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
..+|.|.. .| .||||||++ +.-|++.++
T Consensus 302 ~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 331 (484)
T 1lam_A 302 LCENMPSG------KA-NKPGDVVRARNGKTIQVDNT 331 (484)
T ss_dssp EEEECCST------TS-CCTTEEEECTTSCEEEESCT
T ss_pred eeccCCCC------CC-CCCCCEEEeCCCcEEEeecC
Confidence 34577777 55 899999999 556666655
No 371
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=31.62 E-value=25 Score=31.24 Aligned_cols=24 Identities=42% Similarity=0.720 Sum_probs=20.3
Q ss_pred cCCCCccceEEcCCccEEEEEeee
Q psy18070 8 VKFGNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 8 in~GnSGGplvn~~G~vvGi~~~~ 31 (169)
.-+|.||.|+++.+|+++|+....
T Consensus 130 ~~~g~Sgspi~~~~~~~vg~~~~~ 153 (618)
T 2whx_A 130 FKPGTSGSPIINKKGKVIGLYGNG 153 (618)
T ss_dssp CCTTCTTCEEECSSSCEEEECCC-
T ss_pred CCCCCCCCCccCCCCceecccccc
Confidence 457999999999999999997654
No 372
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=31.15 E-value=33 Score=23.85 Aligned_cols=20 Identities=20% Similarity=0.162 Sum_probs=16.7
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 46 ~~~~~~Vvd~~~~~~Givt~ 65 (159)
T 3fv6_A 46 DVGTLFVVDRDAVLVGVLSR 65 (159)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEEcCCCcEEEEEeH
Confidence 45677999999999999773
No 373
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=30.89 E-value=33 Score=23.99 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=16.5
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++|.+|+++|+.+.
T Consensus 57 ~~~~~~Vvd~~~~~~Givt~ 76 (165)
T 3fhm_A 57 KIGAVVVTDADGVVLGIFTE 76 (165)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEEcCCCeEEEEEEH
Confidence 45677999999999999763
No 374
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=30.49 E-value=33 Score=22.38 Aligned_cols=19 Identities=21% Similarity=0.431 Sum_probs=15.6
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++| +|+++|+.+.
T Consensus 31 ~~~~~~Vvd-~~~~~G~it~ 49 (125)
T 1pbj_A 31 AKGSSVVVK-EGVRVGIVTT 49 (125)
T ss_dssp CCCEEEEEE-TTEEEEEEEH
T ss_pred CCCEEEEEe-CCeeEEEEeH
Confidence 456779999 9999999764
No 375
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=30.10 E-value=30 Score=25.76 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=16.3
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.=|++|.+|+++|+.+.
T Consensus 102 ~~~~lpVvd~~g~lvGiit~ 121 (213)
T 1vr9_A 102 QEPYLPVVDEEMRLKGAVSL 121 (213)
T ss_dssp CCSEEEEECTTCBEEEEEEH
T ss_pred CCCEEEEEcCCCEEEEEEEH
Confidence 44567999988999999774
No 376
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=29.99 E-value=36 Score=23.22 Aligned_cols=21 Identities=14% Similarity=0.370 Sum_probs=17.4
Q ss_pred CCCccceEEcCC-ccEEEEEee
Q psy18070 10 FGNSGGPLVNLD-GEVIGINSM 30 (169)
Q Consensus 10 ~GnSGGplvn~~-G~vvGi~~~ 30 (169)
.+-+.-|++|.+ |+++|+.+.
T Consensus 54 ~~~~~~pVvd~~~~~lvGivt~ 75 (148)
T 3lv9_A 54 EGVTRYPVCRKNKDDILGFVHI 75 (148)
T ss_dssp SCCSEEEEESSSTTSEEEEEEH
T ss_pred CCCCEEEEEcCCCCcEEEEEEH
Confidence 456778999988 899999774
No 377
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=29.97 E-value=29 Score=23.04 Aligned_cols=21 Identities=14% Similarity=0.203 Sum_probs=17.0
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.-|++|.+|+++|+.+..
T Consensus 38 ~~~~~~Vvd~~~~~~Givt~~ 58 (133)
T 1y5h_A 38 DIGALPICGDDDRLHGMLTDR 58 (133)
T ss_dssp TCSEEEEECGGGBEEEEEEHH
T ss_pred CCCeEEEECCCCeEEEEEeHH
Confidence 456779999999999998743
No 378
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=29.88 E-value=36 Score=24.00 Aligned_cols=21 Identities=24% Similarity=0.249 Sum_probs=17.1
Q ss_pred CCCccceEE--cCCccEEEEEee
Q psy18070 10 FGNSGGPLV--NLDGEVIGINSM 30 (169)
Q Consensus 10 ~GnSGGplv--n~~G~vvGi~~~ 30 (169)
.+-++-|++ |.+|+++|+.+.
T Consensus 46 ~~~~~~pVv~~d~~~~lvGiit~ 68 (185)
T 2j9l_A 46 TTYSGFPVVVSRESQRLVGFVLR 68 (185)
T ss_dssp CCCSEEEEESCTTTCBEEEEEEH
T ss_pred cCCCceeEEEECCCCeEEEEEEH
Confidence 356788999 889999999763
No 379
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=29.62 E-value=39 Score=29.54 Aligned_cols=30 Identities=13% Similarity=0.050 Sum_probs=17.2
Q ss_pred EEEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 99 WRVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 99 ~~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
.-..+|.|.. .| .||||||++ +.-|++.++
T Consensus 301 i~~~ENm~sg------~A-~rPgDVits~~G~TVEV~NT 332 (486)
T 3pei_A 301 MGLAENAVDA------RS-YRPGDVLKSMKGITVEVSNT 332 (486)
T ss_dssp EEEEEC-------------CCTTEEEECTTCCEEEECCG
T ss_pred EEeeccCCCC------CC-CCCCCEEEeCCCcEEEEecc
Confidence 3344678887 66 999999999 556666555
No 380
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=29.03 E-value=40 Score=29.53 Aligned_cols=29 Identities=21% Similarity=0.224 Sum_probs=20.9
Q ss_pred EEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 100 RVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 100 ~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
-..+|.|.. .+ .||||||++ +.-|++.++
T Consensus 318 ~~~ENm~~g------~A-~rPgDVit~~~G~TVEV~NT 348 (497)
T 3h8g_F 318 ACAENMPSG------GA-TRPGDIVTTMSGQTVEILNT 348 (497)
T ss_dssp EEEEECCST------TS-CCTTEEEECTTSCEEEESCT
T ss_pred EeeccCCCC------CC-CCCCCEEEeCCCcEEEecCC
Confidence 334677777 55 899999999 556666555
No 381
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=28.81 E-value=42 Score=29.31 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=21.0
Q ss_pred EEEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 99 WRVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 99 ~~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
.-..+|.|.. .+ .||||||++ +.-|++.++
T Consensus 300 i~~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 331 (482)
T 3ij3_A 300 IPAVENAIGS------RS-YRPGDVVQTRARKTIEITNT 331 (482)
T ss_dssp EEEEEECCST------TC-CCTTCEEECTTSCEEECSCT
T ss_pred EEeeccCCCC------CC-CCCCCEEEeCCCCEEEEecC
Confidence 3344677777 56 899999999 555555555
No 382
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=28.19 E-value=43 Score=29.27 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=20.2
Q ss_pred EccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 101 VMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 101 V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
..+|.|.. .+ .||||||++ +.-|++.++
T Consensus 314 ~~ENm~sg------~A-~rPgDVit~~~G~TVEV~NT 343 (490)
T 3jru_B 314 AVENAIDG------NA-YRPSDVITSMSGKTIEVGNT 343 (490)
T ss_dssp EEEECCST------TC-CCTTCEEECTTSCEEECSCT
T ss_pred eeccCCCC------CC-CCCCCEEEecCCcEEEecCC
Confidence 34577777 55 899999999 555555555
No 383
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=28.10 E-value=41 Score=22.39 Aligned_cols=22 Identities=32% Similarity=0.327 Sum_probs=18.0
Q ss_pred CCCccceEEcCC-ccEEEEEeee
Q psy18070 10 FGNSGGPLVNLD-GEVIGINSMK 31 (169)
Q Consensus 10 ~GnSGGplvn~~-G~vvGi~~~~ 31 (169)
.+-+.-|++|.+ |+++|+.+..
T Consensus 36 ~~~~~~pVvd~~~~~~~Givt~~ 58 (129)
T 3jtf_A 36 TAHSRFPVYEDDRDNIIGILLAK 58 (129)
T ss_dssp SCCSEEEEESSSTTCEEEEEEGG
T ss_pred cCCCEEEEEcCCCCcEEEEEEHH
Confidence 456778999986 9999998854
No 384
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=27.68 E-value=45 Score=29.38 Aligned_cols=28 Identities=21% Similarity=0.187 Sum_probs=20.0
Q ss_pred EccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 101 VMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 101 V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
..+|.|.. .| .||||||++ +.-|++.++
T Consensus 335 ~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 364 (515)
T 3kzw_A 335 CAENMINE------AS-MKPDDVFTALSGETVEVMNT 364 (515)
T ss_dssp EEEECCCT------TC-CCTTCEEECTTSCEEECSCT
T ss_pred eeccCCCC------CC-CCCCCEEEeCCCCEEEecCC
Confidence 34577777 55 899999999 555565555
No 385
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=27.58 E-value=17 Score=23.81 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=14.8
Q ss_pred EccCCccccccccccc-CCCCCcEEEe
Q psy18070 101 VMYNSPAYFIKFRTSA-GIKPTSSRLL 126 (169)
Q Consensus 101 V~~~spA~~~~~~~~a-GL~~GDvI~~ 126 (169)
+....|++ +. |+++||||--
T Consensus 39 I~~~DPva------r~~G~k~GdVvkI 59 (77)
T 1eik_A 39 IKTTDPVA------KAIGAKRGDIVKI 59 (77)
T ss_dssp CBTTSHHH------HGGGCCTTCEEEE
T ss_pred eeCcCHhh------HHhCCCCCCEEEE
Confidence 44567777 65 9999999743
No 386
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=27.38 E-value=37 Score=20.92 Aligned_cols=18 Identities=11% Similarity=0.375 Sum_probs=13.3
Q ss_pred CccceEEcCCccEEEEEee
Q psy18070 12 NSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 12 nSGGplvn~~G~vvGi~~~ 30 (169)
-++=|++| +|+++||.+.
T Consensus 23 i~~~~V~d-~~~lvGIvT~ 40 (70)
T 3ghd_A 23 AGSAVVME-GDEILGVVTE 40 (70)
T ss_dssp CSEEEEEE-TTEEEEEEEH
T ss_pred CCEEEEEE-CCEEEEEEEH
Confidence 34556775 7999999874
No 387
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=27.31 E-value=46 Score=29.12 Aligned_cols=29 Identities=21% Similarity=0.176 Sum_probs=20.7
Q ss_pred EEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 100 RVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 100 ~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
-..+|.|.. .| .||||||++ +.-|++.++
T Consensus 303 ~~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 333 (491)
T 2hc9_A 303 CIVENNVSP------IA-NKPDDIIKMLSGKTVEINNT 333 (491)
T ss_dssp EEEEECCST------TS-CCTTCEEECTTSCEEECSCT
T ss_pred EeeecCCCC------CC-CCCCCEEEeCCCcEEEEecC
Confidence 334577777 55 899999999 555665555
No 388
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=26.85 E-value=35 Score=22.71 Aligned_cols=22 Identities=14% Similarity=0.036 Sum_probs=18.0
Q ss_pred CCCCccceEEcCC-ccEEEEEee
Q psy18070 9 KFGNSGGPLVNLD-GEVIGINSM 30 (169)
Q Consensus 9 n~GnSGGplvn~~-G~vvGi~~~ 30 (169)
..+-+.-|++|.+ |+++|+.+.
T Consensus 36 ~~~~~~~pVvd~~~~~~~Givt~ 58 (130)
T 3i8n_A 36 DTPFSRPLVYSEQKDNIIGFVHR 58 (130)
T ss_dssp TCSCSCCEEESSSTTCEEEECCH
T ss_pred hCCCCEEEEEeCCCCcEEEEEEH
Confidence 3466788999987 999999774
No 389
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=25.97 E-value=44 Score=30.06 Aligned_cols=28 Identities=39% Similarity=0.706 Sum_probs=23.2
Q ss_pred ccccCCCCccceEEcCCccEEEEEeeec
Q psy18070 5 GIMVKFGNSGGPLVNLDGEVIGINSMKV 32 (169)
Q Consensus 5 da~in~GnSGGplvn~~G~vvGi~~~~~ 32 (169)
+....+|.||+|+++.+|+++|+....+
T Consensus 181 ~l~~~~g~sgspi~~~~g~~~~l~~~Gf 208 (673)
T 2wv9_A 181 SLDYPIGTSGSPIVNSNGEIIGLYGNGV 208 (673)
T ss_dssp CCCCCGGGTTCEEECTTSCEEEEEEEEE
T ss_pred ECCCCCCCCCCCccCCCcceEEeeeccc
Confidence 3445679999999999999999987653
No 390
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=25.92 E-value=56 Score=28.80 Aligned_cols=29 Identities=10% Similarity=0.106 Sum_probs=20.3
Q ss_pred EEccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 100 RVMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 100 ~V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
-..+|.|.. .| .||||||++ +.-|++.++
T Consensus 341 ~~~ENm~sg------~A-~rPgDVits~~GkTVEV~NT 371 (522)
T 4efd_A 341 CLAENAIGP------KS-YRNDDIIVMKSGKTVEVINT 371 (522)
T ss_dssp EEEECCC-C------CS-TTTTEEEECTTSCEEEESCT
T ss_pred EEeccCCCC------CC-CCCCCEEEecCCcEEEeccC
Confidence 334678877 66 999999999 555665555
No 391
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=25.88 E-value=43 Score=22.28 Aligned_cols=19 Identities=16% Similarity=0.232 Sum_probs=15.4
Q ss_pred CCccceEEcCCccEEEEEee
Q psy18070 11 GNSGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~ 30 (169)
+-+.-|++| +|+++|+.+.
T Consensus 39 ~~~~~~Vvd-~~~~~Givt~ 57 (135)
T 2rc3_A 39 NIGALLVMK-DEKLVGILTE 57 (135)
T ss_dssp TCSEEEEEE-TTEEEEEEEH
T ss_pred CCCEEEEEE-CCEEEEEEeh
Confidence 456779999 9999999764
No 392
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=25.27 E-value=53 Score=23.21 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=18.2
Q ss_pred CCCCccceEEcCC-ccEEEEEee
Q psy18070 9 KFGNSGGPLVNLD-GEVIGINSM 30 (169)
Q Consensus 9 n~GnSGGplvn~~-G~vvGi~~~ 30 (169)
..+-+.-|++|.+ |+++|+.+.
T Consensus 72 ~~~~~~~pVvd~~~~~lvGivt~ 94 (172)
T 3lhh_A 72 QSPHSRFPVCRNNVDDMVGIISA 94 (172)
T ss_dssp TCCCSEEEEESSSTTSEEEEEEH
T ss_pred hCCCCEEEEEeCCCCeEEEEEEH
Confidence 3566888999988 999999774
No 393
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=24.19 E-value=42 Score=26.26 Aligned_cols=19 Identities=21% Similarity=0.001 Sum_probs=15.2
Q ss_pred CCccceEEcCCccEEEEEe
Q psy18070 11 GNSGGPLVNLDGEVIGINS 29 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~ 29 (169)
+-..=|++|.+|+++|+.+
T Consensus 287 ~~~~l~Vvd~~g~l~Giit 305 (334)
T 2qrd_G 287 RVHRLFVVDENLKLEGILS 305 (334)
T ss_dssp CCCEEEEECTTCBEEEEEE
T ss_pred CCCEEEEECCCCeEEEEEe
Confidence 3345689999999999976
No 394
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=23.60 E-value=59 Score=28.70 Aligned_cols=28 Identities=18% Similarity=0.137 Sum_probs=20.0
Q ss_pred EccCCcccccccccccCCCCCcEEEe--cCceeecch
Q psy18070 101 VMYNSPAYFIKFRTSAGIKPTSSRLL--GECLAQYTT 135 (169)
Q Consensus 101 V~~~spA~~~~~~~~aGL~~GDvI~~--~~~v~~~~~ 135 (169)
..+|.|.. .| .||||||++ +.-|++.++
T Consensus 346 ~~ENm~sg------~A-~rPgDVit~~~GkTVEV~NT 375 (528)
T 3kr4_A 346 VCENMVSK------NS-YRPGDIITASNGKTIEVGNT 375 (528)
T ss_dssp EEEECCST------TS-CCTTCEEECTTSCEEECSCT
T ss_pred eeccCCCC------CC-CCCCCEEEeCCCcEEEEecC
Confidence 34577777 55 899999999 555555555
No 395
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=22.63 E-value=47 Score=25.82 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=17.0
Q ss_pred CCccceEEcCCccEEEEEeee
Q psy18070 11 GNSGGPLVNLDGEVIGINSMK 31 (169)
Q Consensus 11 GnSGGplvn~~G~vvGi~~~~ 31 (169)
+-+.=|++|.+|+++|+.+..
T Consensus 220 ~~~~~pVvd~~~~~~Giit~~ 240 (323)
T 3t4n_C 220 RVSSVPIIDENGYLINVYEAY 240 (323)
T ss_dssp TCSEEEEECTTCBEEEEEETT
T ss_pred CCCEEEEECCCCeEEEEEeHH
Confidence 445679999999999998753
No 396
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=22.23 E-value=61 Score=22.11 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=17.7
Q ss_pred CCCccceEEcC--CccEEEEEeee
Q psy18070 10 FGNSGGPLVNL--DGEVIGINSMK 31 (169)
Q Consensus 10 ~GnSGGplvn~--~G~vvGi~~~~ 31 (169)
.+-+.-|++|. +|+++|+.+..
T Consensus 42 ~~~~~~pVvd~~~~~~~~Givt~~ 65 (164)
T 2pfi_A 42 TDVTEYPLVESTESQILVGIVQRA 65 (164)
T ss_dssp CCCSEEEEESCTTTCBEEEEEEHH
T ss_pred CCCCceeEEecCCCCEEEEEEEHH
Confidence 45678899996 79999998754
No 397
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=20.96 E-value=51 Score=28.13 Aligned_cols=18 Identities=28% Similarity=0.595 Sum_probs=15.4
Q ss_pred ccceEEcCCccEEEEEee
Q psy18070 13 SGGPLVNLDGEVIGINSM 30 (169)
Q Consensus 13 SGGplvn~~G~vvGi~~~ 30 (169)
.--|++|.+|+++|+.+.
T Consensus 251 ~~lpVVDe~g~lvGiIT~ 268 (473)
T 2zy9_A 251 TVLPVVDEEGRLVGIVTV 268 (473)
T ss_dssp SEEEEECTTSBEEEEEEH
T ss_pred cEEEEEcCCCEEEEEEeh
Confidence 456999999999999874
No 398
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=20.89 E-value=64 Score=23.82 Aligned_cols=47 Identities=11% Similarity=0.063 Sum_probs=32.3
Q ss_pred CCCccceEEcCCccEEEEEeeecc--------------CCeEEEEehhhHHHHHHhhhhcC
Q psy18070 10 FGNSGGPLVNLDGEVIGINSMKVT--------------AGISFAIPIDYAIEFLTNYKRKD 56 (169)
Q Consensus 10 ~GnSGGplvn~~G~vvGi~~~~~~--------------~~~~faiP~~~i~~~l~~l~~~g 56 (169)
.+-++-|++|.+|+++|+.+..-- ...-+.=|-..+.++++.+.+.+
T Consensus 42 ~~~~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~ 102 (213)
T 1vr9_A 42 YQTNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQ 102 (213)
T ss_dssp TTSSEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBCTTCCEETTSBHHHHHHHHHHCC
T ss_pred CCCCEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccCCCEEECCCCcHHHHHHHHHHhC
Confidence 456788999999999999986421 12234444556777777777665
No 399
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=20.64 E-value=64 Score=23.04 Aligned_cols=21 Identities=29% Similarity=0.243 Sum_probs=17.2
Q ss_pred CCCccceEEcCC-ccEEEEEee
Q psy18070 10 FGNSGGPLVNLD-GEVIGINSM 30 (169)
Q Consensus 10 ~GnSGGplvn~~-G~vvGi~~~ 30 (169)
.+-+.-|++|.+ |+++|+.+.
T Consensus 67 ~~~~~~pVvd~~~~~lvGivt~ 88 (173)
T 3ocm_A 67 APHSFFPVCRGSLDEVVGIGRA 88 (173)
T ss_dssp SSCSEEEEESSSTTSEEEEEEH
T ss_pred CCCCEEEEEeCCCCCEEEEEEH
Confidence 456778999987 999999774
Done!