BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18072
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41374|IF2A_DROME Eukaryotic translation initiation factor 2 subunit 1
OS=Drosophila melanogaster GN=eIF-2alpha PE=2 SV=1
Length = 341
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 75/79 (94%)
Query: 1 MPLSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK 60
M L+ RFY E+YPE+EDVVMV V+SIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK
Sbjct: 1 MALTSRFYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK 60
Query: 61 LIRVGKTEPVVVIRVDKEK 79
LIRVGKTEPVVVIRVDKEK
Sbjct: 61 LIRVGKTEPVVVIRVDKEK 79
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T +K DGLKAL+ AI+ I+AK + G F+V MAPK+VTA DEA+LAR++ERAEA
Sbjct: 234 VMTTSTTKKTDGLKALEVAIEHIRAKTSEYDGEFKVIMAPKLVTAIDEADLARRLERAEA 293
Query: 140 ENAEV 144
ENA+V
Sbjct: 294 ENAQV 298
>sp|P05198|IF2A_HUMAN Eukaryotic translation initiation factor 2 subunit 1 OS=Homo
sapiens GN=EIF2S1 PE=1 SV=3
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEK 79
KLIR+G+ E VVVIRVDKEK
Sbjct: 61 KLIRIGRNECVVVIRVDKEK 80
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQMER E
Sbjct: 236 VMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|Q5ZLX2|IF2A_CHICK Eukaryotic translation initiation factor 2 subunit 1 OS=Gallus
gallus GN=EIF2S1 PE=2 SV=2
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPALSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEK 79
KLIR+G+ E VVVIRVDKEK
Sbjct: 61 KLIRIGRNECVVVIRVDKEK 80
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|P68101|IF2A_RAT Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus
norvegicus GN=Eif2s1 PE=1 SV=2
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEK 79
KLIR+G+ E VVVIRVDKEK
Sbjct: 61 KLIRIGRNECVVVIRVDKEK 80
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|Q6ZWX6|IF2A_MOUSE Eukaryotic translation initiation factor 2 subunit 1 OS=Mus
musculus GN=Eif2s1 PE=1 SV=3
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEK 79
KLIR+G+ E VVVIRVDKEK
Sbjct: 61 KLIRIGRNECVVVIRVDKEK 80
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|P68102|IF2A_BOVIN Eukaryotic translation initiation factor 2 subunit 1 OS=Bos
taurus GN=EIF2S1 PE=2 SV=2
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 1/80 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEK 79
KLIR+G+ E VVVIRVDKEK
Sbjct: 61 KLIRIGRNECVVVIRVDKEK 80
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|Q5R493|IF2A_PONAB Eukaryotic translation initiation factor 2 subunit 1 OS=Pongo
abelii GN=EIF2S1 PE=2 SV=1
Length = 315
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 78/95 (82%), Gaps = 6/95 (6%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEKVMT-----TVTPEKA 89
KLIR+G+ E VVVIRVDKEK V+PE+A
Sbjct: 61 KLIRIGRNERVVVIRVDKEKGYIDLSKRRVSPEEA 95
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK KIE+ GVF VQM PKVVT +DE ELARQMER E
Sbjct: 236 VMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLER 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|Q6GL89|IF2A_XENTR Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus
tropicalis GN=eif2s1 PE=2 SV=1
Length = 315
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/97 (71%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEV+DVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPALSCRFYQHKFPEVDDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEKVMTTVTPEKADGLKALQ 96
KLIR+G+ E VVVIRVDK+K ++ + +AL+
Sbjct: 61 KLIRIGRNECVVVIRVDKDKGYIDLSKRRVSPEEALK 97
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK +IE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMSVIKERIEEKRGVFNVQMEPKVVTDTDETELARQLERLEK 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD +E
Sbjct: 296 ENAEVDGDDDAEE 308
>sp|Q7ZTK4|IF2A_XENLA Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus
laevis GN=eif2s1 PE=2 SV=1
Length = 315
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 91/134 (67%), Gaps = 22/134 (16%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP L+CRFY K+PEV+DVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLNCRFYQHKFPEVDDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGKTEPVVVIRVDKEKVMT-----TVTPEKA--------------DGLKALQEAID 100
KLIR+G+ E VVVIRVDK+K V+PE+A L+ + E +D
Sbjct: 61 KLIRIGRNECVVVIRVDKDKGYIDLSKRRVSPEEALKCEDKFTKSKTVYSILRHVAEVLD 120
Query: 101 TIKAKIEQLGGVFQ 114
K EQL +FQ
Sbjct: 121 YTKD--EQLDSLFQ 132
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 53/73 (72%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VMTT T E+ +GL L +A+ IK +IE+ GVF VQM PKVVT +DE ELARQ+ER E
Sbjct: 236 VMTTTTLERTEGLSVLNQAMSVIKERIEEKRGVFNVQMEPKVVTDTDETELARQLERLEK 295
Query: 140 ENAEVAADDDEDE 152
ENAEV DDD DE
Sbjct: 296 ENAEVDGDDDADE 308
>sp|P20459|IF2A_YEAST Eukaryotic translation initiation factor 2 subunit alpha
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SUI2 PE=1 SV=1
Length = 304
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/75 (78%), Positives = 65/75 (86%)
Query: 5 CRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRV 64
CRFY KYPE++D+VMV V IAEMGAYV LLEY+NIEGMILLSELSRRRIRSI KLIRV
Sbjct: 6 CRFYENKYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRV 65
Query: 65 GKTEPVVVIRVDKEK 79
GK + VV+RVDKEK
Sbjct: 66 GKNDVAVVLRVDKEK 80
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
V+TT +K G++ L+ AI+ I I + GGV + M PK VTA+++AEL +E E
Sbjct: 229 VLTTQALDKQKGIEQLESAIEKITEVITKYGGVCNITMPPKAVTATEDAELQALLESKEL 288
Query: 140 EN 141
+N
Sbjct: 289 DN 290
>sp|P20460|IF2A_PIG Eukaryotic translation initiation factor 2 subunit 1 (Fragment)
OS=Sus scrofa GN=EIF2S1 PE=1 SV=2
Length = 70
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Query: 1 MP-LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSIN 59
MP LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEGMILLSELSRRRIRSIN
Sbjct: 1 MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSIN 60
Query: 60 KLIRVGK 66
KLIR+G+
Sbjct: 61 KLIRIGR 67
>sp|P56286|IF2A_SCHPO Eukaryotic translation initiation factor 2 subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif211 PE=1 SV=1
Length = 306
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 4 SCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIR 63
SCR Y ++PEV+++V+V V I EMGAYV LLEY+NIEGM+LLSELSRRRIRS+ K IR
Sbjct: 5 SCRMYENRFPEVDELVVVNVRQIQEMGAYVKLLEYDNIEGMVLLSELSRRRIRSVQKHIR 64
Query: 64 VGKTEPVVVIRVDKEK 79
VG+ E VVV+RVDKEK
Sbjct: 65 VGRNEVVVVLRVDKEK 80
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
V+ T +K+ GLK L+EAI I+ I G V+M PK V+ +DE ELA M++ E
Sbjct: 230 VLLTNALDKSLGLKKLEEAIGAIEKSITASNGTCTVKMKPKAVSETDELELADLMKKFEK 289
Query: 140 ENAEVAADDDEDE 152
ENAE++ D+++D+
Sbjct: 290 ENAEISGDEEDDQ 302
>sp|Q869N9|IF2A_DICDI Eukaryotic translation initiation factor 2 subunit 1
OS=Dictyostelium discoideum GN=eif2s1 PE=1 SV=1
Length = 341
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 65/75 (86%)
Query: 5 CRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRV 64
CR Y +KYPE ++VMV + SI +MG YV LLEYNNIEGMILLSE+SRRRIRSINKL+RV
Sbjct: 7 CRMYEKKYPEENELVMVRIESIGDMGVYVSLLEYNNIEGMILLSEISRRRIRSINKLVRV 66
Query: 65 GKTEPVVVIRVDKEK 79
GKTE VVV+RVDK+K
Sbjct: 67 GKTEAVVVVRVDKDK 81
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 80 VMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVVTASDEAELARQMERAEA 139
VM EK GL + + +D + +I + G ++ AP++V A D+ EL ME+ E
Sbjct: 248 VMVGTFDEKEKGLSMVGQCVDVLSEEITKKNGNLTIKAAPRIVGAVDDQELRDLMEQLEV 307
Query: 140 EN 141
EN
Sbjct: 308 EN 309
>sp|P83268|IF2A_RABIT Eukaryotic translation initiation factor 2 subunit 1 (Fragment)
OS=Oryctolagus cuniculus GN=EIF2S1 PE=1 SV=1
Length = 52
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/50 (86%), Positives = 44/50 (88%)
Query: 3 LSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSR 52
LSCRFY K+PEVEDVVMV V SIAEMGAYV LLEYNNIEG ILLSELSR
Sbjct: 3 LSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGRILLSELSR 52
>sp|Q57581|IF2A_METJA Translation initiation factor 2 subunit alpha OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=eif2a PE=3 SV=1
Length = 266
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 12 YPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVV 71
+PE D+V+ TV + GA+V LLEY EGMI +SE++ +++I ++VG+
Sbjct: 8 FPEEGDIVIGTVKDVKPYGAFVELLEYPGKEGMIHISEVTSGWVKNIRDHVKVGQRVVAK 67
Query: 72 VIRVDKEK-----VMTTVTPE----KADGLKALQEAIDTIKAKIEQLGGVFQVQMAPKVV 122
V+RVD+ K + VT + K K Q A ++ E+LG +
Sbjct: 68 VLRVDERKGHIDLSLKRVTEQQKRAKVQEWKRFQRASKMLERAAEKLGKSLEEAWEEVGY 127
Query: 123 TASDE-AELARQMERAEAENAEVAADDDEDEEDFDN 157
DE EL E E EV DD E E++ N
Sbjct: 128 LLEDEFGELYNAFETMVIEGKEV-LDDLEISEEWKN 162
>sp|A2BN93|IF2A_HYPBU Translation initiation factor 2 subunit alpha OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=eif2a PE=3
SV=1
Length = 267
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
P+V ++V+ TV + + GAY+ L EY +E + SE++ R +RSI+ +++ G+ V V
Sbjct: 9 PDVGELVVATVKEVYDYGAYLTLDEYGGLEAYLPWSEVASRWVRSIHDVVKPGQKIVVKV 68
Query: 73 IRVDKEKVMTTVT 85
IRV+K K V+
Sbjct: 69 IRVNKRKKQVDVS 81
>sp|Q973G0|IF2A_SULTO Translation initiation factor 2 subunit alpha OS=Sulfolobus
tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 /
7) GN=eif2a PE=3 SV=1
Length = 263
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
P ++++ TV I + G+YV L EY N++ + SE+S R +++I +I+ G+ V V
Sbjct: 9 PTEGEILIATVKQIFDYGSYVTLDEYGNLQAFLPWSEISSRWVKNIRDVIKEGRKIVVKV 68
Query: 73 IRVDKEKVMTTVTPEKA 89
IRVDK K V+ +K
Sbjct: 69 IRVDKRKGTIDVSLKKV 85
>sp|B6YT35|IF2A_THEON Translation initiation factor 2 subunit alpha OS=Thermococcus
onnurineus (strain NA1) GN=eif2a PE=3 SV=1
Length = 275
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 9 AEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTE 68
A++YPE + V+ TV SI GA++ L EY EG + +SE++ +++I ++ G+
Sbjct: 5 AKEYPEEGEFVIATVKSIHPYGAFLKLDEYPGKEGFMHISEVASTWVKNIRDYVKEGQKV 64
Query: 69 PVVVIRVDKEKVMTTVTPEKADG---------LKALQEAIDTIKAKIEQLGGVFQV 115
VIRVD K ++ ++ + K Q+A + +K E+LG F++
Sbjct: 65 VAKVIRVDPNKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFEM 120
>sp|A3DM89|IF2A_STAMF Translation initiation factor 2 subunit alpha OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eif2a
PE=3 SV=1
Length = 267
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
P V + V+ TV I + GAYV L EYN +E + SE++ R +R+I +IR + V V
Sbjct: 9 PNVGEYVIATVKEIFDYGAYVTLDEYNGLEAYLPWSEVASRWVRNIRDVIRENQKIVVKV 68
Query: 73 IRVDKEKVMTTVTPEKA 89
IRV++ + V+ +K
Sbjct: 69 IRVNRRRKTVDVSLKKV 85
>sp|Q8U1R5|IF2A_PYRFU Translation initiation factor 2 subunit alpha OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=eif2a PE=3 SV=1
Length = 275
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 9 AEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTE 68
A +YPE ++V+ TV + GA++ L EY EG + +SE++ +++I +R G+
Sbjct: 5 AREYPEEGELVVATVKRVHNYGAFLDLDEYPGKEGFMHISEVASTWVKNIRDYLREGQKV 64
Query: 69 PVVVIRVDKEK-----VMTTVTPE----KADGLKALQEAIDTIKAKIEQLGGVFQ 114
VIRVD +K + VT + K K Q+A + +K E+LG F+
Sbjct: 65 VAKVIRVDPKKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFE 119
>sp|Q5JE49|IF2A_PYRKO Translation initiation factor 2 subunit alpha OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=eif2a PE=3 SV=1
Length = 275
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 9 AEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTE 68
A++YPE + V+ TV +I GA++ L EY EG + +SE++ +++I ++ G+
Sbjct: 5 AKEYPEEGEFVVATVKNIHPYGAFLTLDEYPGKEGFMHISEVAPTWVKNIRDYLKEGQKI 64
Query: 69 PVVVIRVDKEKVMTTVTPEKADG---------LKALQEAIDTIKAKIEQLGGVFQ 114
VIRVD EK ++ ++ + K Q+A + +K E+LG F+
Sbjct: 65 VAKVIRVDPEKGHIDLSLKRVNQQQRKAKLQEYKRAQKAENLLKMAAEKLGKDFE 119
>sp|C5A4Z9|IF2A_THEGJ Translation initiation factor 2 subunit alpha OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=eif2a PE=3 SV=1
Length = 273
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 1 MPLSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK 60
MP R +YPE + V+ TV +I GA++ L EY EG + +SE++ +++I
Sbjct: 1 MPRKAR----EYPEEGEFVVATVKNIHPYGAFLILDEYPGKEGFMHISEVAPTWVKNIRD 56
Query: 61 LIRVGKTEPVVVIRVDKEK 79
++ G+ V VIRVD EK
Sbjct: 57 YVKEGQKVVVKVIRVDPEK 75
>sp|Q9V0E4|IF2A_PYRAB Translation initiation factor 2 subunit alpha OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=eif2a PE=1 SV=1
Length = 275
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 9 AEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTE 68
A +YPE + V+ TV I GA++ L EY E + +SE++ +R+I ++ G+
Sbjct: 5 AREYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKV 64
Query: 69 PVVVIRVDKEK-----VMTTVTPE----KADGLKALQEAIDTIKAKIEQLGGVFQ 114
VIRVD K + VT + K K Q+A + +K E+LG F+
Sbjct: 65 VAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFE 119
>sp|O58655|IF2A_PYRHO Translation initiation factor 2 subunit alpha OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=eif2a PE=1 SV=1
Length = 275
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 1 MPLSCRFYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINK 60
MP R +YPE + V+ TV I GA++ L EY E + +SE++ +R+I
Sbjct: 1 MPRKAR----EYPEEGEFVVATVKRIHNYGAFLELDEYPGKEAFMHISEVASTWVRNIRD 56
Query: 61 LIRVGKTEPVVVIRVDKEK-----VMTTVTPE----KADGLKALQEAIDTIKAKIEQLGG 111
++ G+ VIRVD K + VT + K K Q+A + ++ E+LG
Sbjct: 57 YLKEGQKVVAKVIRVDPRKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLRLAAEKLGK 116
Query: 112 VFQ 114
F+
Sbjct: 117 DFE 119
>sp|A0LHM4|PNP_SYNFM Polyribonucleotide nucleotidyltransferase OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=pnp PE=3 SV=1
Length = 699
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PEV + M ++ + + GA+ +L NIEG+I +S+L RR+R + +++ G V V
Sbjct: 617 PEVGQLYMSRIVRVTDFGAFAEILP--NIEGLIHISQLEHRRVRKVTDVVQEGDEVLVKV 674
Query: 73 IRVDKE 78
I +DK+
Sbjct: 675 IEIDKD 680
>sp|Q8TY86|IF2A_METKA Translation initiation factor 2 subunit alpha OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=eif2a PE=3 SV=1
Length = 267
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PE ++VM TV + + GA+V L EY ++G I +SE++ +++I ++ G+ V
Sbjct: 9 PEEGEIVMATVERVEDHGAFVTLDEYPGVDGYIHISEVASGWVKNIRDYVKEGQKVVAKV 68
Query: 73 IRVDKEKVMTTVT 85
IRV+ ++ ++
Sbjct: 69 IRVNPKRKYANLS 81
>sp|Q2IQ01|PNP_ANADE Polyribonucleotide nucleotidyltransferase OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=pnp PE=3 SV=2
Length = 721
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
EV + M TV IAE GA+V + + +G+I +SELS +R++S++ ++ G+ V VI
Sbjct: 629 EVGRIYMGTVRKIAEFGAFVEI--FPGTDGLIHISELSDKRVKSVSDVLSEGEEVMVKVI 686
Query: 74 RVDK 77
VD+
Sbjct: 687 SVDR 690
>sp|Q97Z79|IF2A_SULSO Translation initiation factor 2 subunit alpha OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322
/ P2) GN=eif2a PE=1 SV=1
Length = 266
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 46/82 (56%)
Query: 7 FYAEKYPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGK 66
+ K P ++++ TV + + G+YV L EY ++ + SE+S + +++I +++ +
Sbjct: 3 YSRSKLPSEGEILIATVKQVFDYGSYVSLDEYGGLQAFLPWSEVSSKWVKNIRDVLKENR 62
Query: 67 TEPVVVIRVDKEKVMTTVTPEK 88
V VIRVD+ K V+ +K
Sbjct: 63 KVIVKVIRVDRRKGTVDVSLKK 84
>sp|Q9YF02|IF2A_AERPE Translation initiation factor 2 subunit alpha OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC
100138 / K1) GN=eif2a PE=3 SV=3
Length = 277
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
P+V ++V+ TV + + GAY+ L EY + + SE++ R +R+I+ +++ + V V
Sbjct: 19 PDVGEIVVGTVQEVHDYGAYLILDEYGGVRAFLPWSEIASRAVRNIHAVLKPRQKVVVKV 78
Query: 73 IRVDKEK 79
IRV K++
Sbjct: 79 IRVYKKR 85
>sp|B4UHG5|PNP_ANASK Polyribonucleotide nucleotidyltransferase OS=Anaeromyxobacter sp.
(strain K) GN=pnp PE=3 SV=1
Length = 721
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
EV + + TV IAE GA+V + + +G+I +SELS +R++S++ ++ G+ V VI
Sbjct: 629 EVGRIYLGTVRKIAEFGAFVEI--FPGTDGLIHISELSDKRVKSVSDVLSEGEEVMVKVI 686
Query: 74 RVDKE 78
VD+
Sbjct: 687 SVDRS 691
>sp|A7H9F8|PNP_ANADF Polyribonucleotide nucleotidyltransferase OS=Anaeromyxobacter sp.
(strain Fw109-5) GN=pnp PE=3 SV=1
Length = 722
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
E+ + TV IAE GA+V L + +G+I +SELS +R++S++ ++ G+ V VI
Sbjct: 629 EIGKTYLGTVRKIAEFGAFVEL--FPGTDGLIHISELSDKRVKSVSDVLSEGEEVLVKVI 686
Query: 74 RVDK 77
VD+
Sbjct: 687 SVDR 690
>sp|B8JFZ1|PNP_ANAD2 Polyribonucleotide nucleotidyltransferase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pnp PE=3
SV=1
Length = 721
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
EV + + TV IAE GA+V + + +G+I +SELS +R++S++ ++ G+ V VI
Sbjct: 629 EVGRIYLGTVRKIAEFGAFVEI--FPGTDGLIHISELSDKRVKSVSDVLSEGEEVMVKVI 686
Query: 74 RVDKE 78
VD+
Sbjct: 687 SVDRS 691
>sp|Q5M6F9|PNP_STRT2 Polyribonucleotide nucleotidyltransferase OS=Streptococcus
thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pnp
PE=3 SV=1
Length = 741
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V +V V V+ I + GA+VHL +N + ++ +SEL+ + + +++VG V +I
Sbjct: 623 KVGEVYTVPVVRIEKFGAFVHL--FNKTDALVHISELAWKHTEHVEDVVKVGDMVTVKII 680
Query: 74 RVDKE 78
++D++
Sbjct: 681 KIDEK 685
>sp|Q5M1W9|PNP_STRT1 Polyribonucleotide nucleotidyltransferase OS=Streptococcus
thermophilus (strain CNRZ 1066) GN=pnp PE=3 SV=1
Length = 741
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V +V V V+ I + GA+VHL +N + ++ +SEL+ + + +++VG V +I
Sbjct: 623 KVGEVYTVPVVRIEKFGAFVHL--FNKTDALVHISELAWKHTEHVEDVVKVGDMVTVKII 680
Query: 74 RVDKE 78
++D++
Sbjct: 681 KIDEK 685
>sp|Q03MV9|PNP_STRTD Polyribonucleotide nucleotidyltransferase OS=Streptococcus
thermophilus (strain ATCC BAA-491 / LMD-9) GN=pnp PE=3
SV=1
Length = 741
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V +V V V+ I + GA+VHL +N + ++ +SEL+ + + +++VG V +I
Sbjct: 623 KVGEVYTVPVVRIEKFGAFVHL--FNKTDALVHISELAWKHTEHVEDVVKVGDMVTVKII 680
Query: 74 RVDKE 78
++D++
Sbjct: 681 KIDEK 685
>sp|Q97BP2|IF2A_THEVO Translation initiation factor 2 subunit alpha OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=eif2a PE=3 SV=1
Length = 254
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PEV D+V+V + + GA L EY +EG I +SE++ ++ I +R G+ V
Sbjct: 7 PEVGDLVVVKITEVKNFGANGILEEYPGVEGYIHISEVATGWVKHIRSYLREGQRVVCKV 66
Query: 73 IRVDKEK 79
I V++E+
Sbjct: 67 INVNQER 73
>sp|Q1DAM1|PNP_MYXXD Polyribonucleotide nucleotidyltransferase OS=Myxococcus xanthus
(strain DK 1622) GN=pnp PE=3 SV=1
Length = 722
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
E+ + TV IAE GA+V L + +G+I +SELS +R++S++ ++ G V V+
Sbjct: 620 EIGKIYTGTVRKIAEFGAFVEL--FPGTDGLIHISELSDKRVKSVSDVLNEGDEVLVKVV 677
Query: 74 RVDK 77
+DK
Sbjct: 678 SIDK 681
>sp|Q3YSC4|PNP_EHRCJ Polyribonucleotide nucleotidyltransferase OS=Ehrlichia canis
(strain Jake) GN=pnp PE=3 SV=1
Length = 796
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PE+ V TV+ I + GA+V+ L G+I +SE+ I ++ +I V V+V
Sbjct: 623 PEIGKVFEGTVVEIVKFGAFVNFL--GGKRGLIHISEIKNEHISAVGSVISVNDKVKVLV 680
Query: 73 IRVDKEKVMTTV------TPEKADG 91
I +D+E V ++ T E DG
Sbjct: 681 IGIDREHVQLSMRRVDQETGEPIDG 705
>sp|Q6MMS2|PNP_BDEBA Polyribonucleotide nucleotidyltransferase OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=pnp PE=3 SV=1
Length = 697
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 23 VISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVIRVDKE 78
++ IAE GA+V +L N +G++ +SE+S R+R+++ +++ G+ V V+ VD+
Sbjct: 632 IVKIAEFGAFVEILP--NTQGLLHISEISNERVRAVSDVLKEGEIIDVKVLEVDRS 685
>sp|Q5HBH6|PNP_EHRRW Polyribonucleotide nucleotidyltransferase OS=Ehrlichia ruminantium
(strain Welgevonden) GN=pnp PE=3 SV=1
Length = 789
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PE+ V TVI I + GA+V L G+I +SE+ I ++ +I V V+V
Sbjct: 627 PEIGKVFDGTVIEIVKFGAFVSFL--GGKRGLIHISEIKNEHINAVGSVISVNDKVKVLV 684
Query: 73 IRVDKEKVMTTV------TPEKADG 91
I +D+E V ++ T E DG
Sbjct: 685 IGIDREYVQLSMRRVDQETGEPIDG 709
>sp|Q5FHK5|PNP_EHRRG Polyribonucleotide nucleotidyltransferase OS=Ehrlichia ruminantium
(strain Gardel) GN=pnp PE=3 SV=1
Length = 789
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PE+ V TVI I + GA+V L G+I +SE+ I ++ +I V V+V
Sbjct: 627 PEIGKVFDGTVIEIVKFGAFVSFL--GGKRGLIHISEIKNEHINAVGSVISVNDKVKVLV 684
Query: 73 IRVDKEKVMTTV------TPEKADG 91
I +D+E V ++ T E DG
Sbjct: 685 IGIDREYVQLSMRRVDQETGEPIDG 709
>sp|B9MR54|PNP_CALBD Polyribonucleotide nucleotidyltransferase OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=pnp
PE=3 SV=1
Length = 701
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
EV + V A GA+V + Y EG++ +S+L RR++S++++++VG V VI
Sbjct: 619 EVGQFFLGKVTRTASYGAFVEI--YPGKEGLVHISQLDERRLKSVDEVVKVGDLVLVKVI 676
Query: 74 RVDK 77
+DK
Sbjct: 677 GIDK 680
>sp|O29723|IF2A_ARCFU Translation initiation factor 2 subunit alpha OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=eif2a PE=3 SV=1
Length = 267
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 12 YPEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGK 66
YP ++V+ TV + + GA+V L EY EGM+ +SE++ I+ I + ++ G+
Sbjct: 13 YPSKGEIVIGTVKRVLDFGAFVSLDEYEGREGMVHISEVASGWIKDIREHVKKGQ 67
>sp|Q73NW1|PNP_TREDE Polyribonucleotide nucleotidyltransferase OS=Treponema denticola
(strain ATCC 35405 / CIP 103919 / DSM 14222) GN=pnp PE=3
SV=1
Length = 698
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PEV V TV I + GA+V +L EG+ +S+LSR R+ ++ +++ G+ PV +
Sbjct: 619 PEVGMVYDGTVKKIMDFGAFVEILP--GKEGLCHISKLSRSRVEKVSDVLKEGQEIPVKL 676
Query: 73 IRVDK 77
+ +DK
Sbjct: 677 LEIDK 681
>sp|A5CWW8|PNP_VESOH Polyribonucleotide nucleotidyltransferase OS=Vesicomyosocius
okutanii subsp. Calyptogena okutanii (strain HA) GN=pnp
PE=3 SV=1
Length = 695
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 13 PEVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVV 72
PEV V V+ I E GA+++++ N +G++ +SE+S R+ + IR G V V
Sbjct: 620 PEVNKVYTGKVVKIVEFGAFINIMP--NQDGLLHISEISHERVEKVKDHIREGDKIDVKV 677
Query: 73 IRVDKEKV 80
I +D+ ++
Sbjct: 678 IGLDRGRI 685
>sp|B8G3Z1|PNP_CHLAD Polyribonucleotide nucleotidyltransferase OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=pnp PE=3 SV=1
Length = 755
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V D+ + V+SI GA+V++L + GM+ +SEL +R+ ++ ++ +G V+VI
Sbjct: 627 KVGDIFLGKVVSIKPFGAFVNILPGKD--GMVHVSELDEKRVENVEDVVSLGDEINVMVI 684
Query: 74 RVDKEK---------VMTTVTPE--KADG 91
+D+ V+T TPE KA G
Sbjct: 685 DIDRNTGKISLSRRAVLTGETPEARKAAG 713
>sp|B5YHN2|PNP_THEYD Polyribonucleotide nucleotidyltransferase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=pnp PE=3 SV=1
Length = 710
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
E+ + M V I + GA+V ++ +EG++ +S+++ +RI+ ++++++ G+ PV VI
Sbjct: 626 ELGRIYMGKVTRIVDFGAFVEIMP--GVEGLLHISQIADKRIQKVSEVLKTGEQIPVKVI 683
Query: 74 RVD 76
+D
Sbjct: 684 EID 686
>sp|B9LH03|PNP_CHLSY Polyribonucleotide nucleotidyltransferase OS=Chloroflexus
aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl)
GN=pnp PE=3 SV=1
Length = 755
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V D+ + V+SI GA+V++L + GM+ +SEL +R+ ++ ++ +G V+VI
Sbjct: 627 KVGDIFLGKVVSIKPFGAFVNILPGKD--GMVHVSELDEKRVENVEDVVSLGDEINVMVI 684
Query: 74 RVD---------KEKVMTTVTPE--KADG 91
+D + V+T TPE KA G
Sbjct: 685 DIDRTTGKISLSRRAVLTGETPEERKAAG 713
>sp|A9WEJ7|PNP_CHLAA Polyribonucleotide nucleotidyltransferase OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=pnp PE=3 SV=1
Length = 755
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 14 EVEDVVMVTVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVI 73
+V D+ + V+SI GA+V++L + GM+ +SEL +R+ ++ ++ +G V+VI
Sbjct: 627 KVGDIFLGKVVSIKPFGAFVNILPGKD--GMVHVSELDEKRVENVEDVVSLGDEINVMVI 684
Query: 74 RVD---------KEKVMTTVTPE--KADG 91
+D + V+T TPE KA G
Sbjct: 685 DIDRTTGKISLSRRAVLTGETPEERKAAG 713
>sp|Q7UR95|PNP_RHOBA Polyribonucleotide nucleotidyltransferase OS=Rhodopirellula baltica
(strain SH1) GN=pnp PE=3 SV=2
Length = 753
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 22 TVISIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGKTEPVVVIRVDKE 78
TV SI E GA+V +L + G++ +SE+S I S++++I VG V+VI VD+
Sbjct: 630 TVSSIKEFGAFVEILPGRD--GLVHISEMSGGYISSLDQVIAVGDAMKVLVIDVDEH 684
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.131 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,117,927
Number of Sequences: 539616
Number of extensions: 2416758
Number of successful extensions: 47918
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 1044
Number of HSP's that attempted gapping in prelim test: 26680
Number of HSP's gapped (non-prelim): 12900
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)