BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18073
(639 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NVS5|DCA13_XENTR DDB1- and CUL4-associated factor 13 OS=Xenopus tropicalis GN=dcaf13
PE=2 SV=1
Length = 445
Score = 291 bits (746), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 128/224 (57%), Positives = 170/224 (75%), Gaps = 1/224 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RETK + R+PRN DP+LHPFE PREY RALNATKLERVFAKPF+A+LD
Sbjct: 4 KVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR +C G+
Sbjct: 64 GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K WS E + + P+ TI+ K+V + I H IFATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWSMESPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+R+ P+R+++W VDS+ ++FNPI+ HIL+SC +DRSI+LYD R
Sbjct: 184 QRSAPMRSYAWGVDSISSIKFNPIETHILSSCGTDRSIVLYDKR 227
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 96/140 (68%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ VL RNPD+Y+RETK + R+PRN DP+LHPFE PRE
Sbjct: 2 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPRE--------------------- 40
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
Y RALNATKLERVFAKPF+A+LDGH+DG++C+AKHP LST++SGA DGEVK+WNLT
Sbjct: 41 --YTRALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTK 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
+ C +T QAHDG VR R
Sbjct: 99 RECSRTIQAHDGFVRGLCVR 118
>sp|Q24574|UBPE_DROME Ubiquitin carboxyl-terminal hydrolase 64E OS=Drosophila
melanogaster GN=Ubp64E PE=1 SV=2
Length = 1556
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 148/169 (87%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + AVETTDLTRSFGW+S++AWQQHDIQELCRV+FDALE +FK +K QA+LI+NL
Sbjct: 451 TSPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTK----QANLISNL 506
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
Y+GKM DYVKCLEC TEK+REDTFLDIPLPVRPFGSS AYG I EA+RAFV+PETLDG N
Sbjct: 507 YEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNN 566
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QY C+KC KKCDAHKGL F FPY+LTLHL RFDFDY TMHRIKLND+V
Sbjct: 567 QYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRV 615
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 98/111 (88%), Gaps = 5/111 (4%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD 60
MTCYLNSL+QALFMTPEFRNA+Y+W+++ND E +I YQLQKLF+NLQTS + AVETTD
Sbjct: 403 MTCYLNSLLQALFMTPEFRNALYRWEFDND-NEAKNIPYQLQKLFLNLQTSPKAAVETTD 461
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
LTRSFGW+S++AWQQHDIQELCRV+FDALE +FK +K QA+LI+NLY+
Sbjct: 462 LTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTK----QANLISNLYE 508
>sp|Q7ZYQ6|DCA13_XENLA DDB1- and CUL4-associated factor 13 OS=Xenopus laevis GN=dcaf13
PE=2 SV=1
Length = 445
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 126/224 (56%), Positives = 170/224 (75%), Gaps = 1/224 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RETK + R+PRN DP+LHPFE REY RALNATKLERVFAKPF+A+LD
Sbjct: 4 KVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR +C G+
Sbjct: 64 GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W+ E + + P+ TI+ K+V + I H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+R+ P+R+++W VDS+ V+FNP++ HIL+SC +DRSI+LYD R
Sbjct: 184 QRSAPMRSYAWGVDSISSVRFNPVETHILSSCGTDRSIVLYDKR 227
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 120/214 (56%), Gaps = 33/214 (15%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ VL RNPD+Y+RETK + R+PRN DP+LHPFE REY R
Sbjct: 2 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTR------------------ 43
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
ALNATKLERVFAKPF+A+LDGH+DG++C+AKHP LST++SGA DGEVK+WNLT
Sbjct: 44 -----ALNATKLERVFAKPFIASLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTK 98
Query: 453 QSCVQTYQAHDGHVRDTSTR------PAVETTDLTRSFGWESSDAWQQHDIQE--LCRVL 504
+ C +T QAHDG VR R V + + ES ++ + L + +
Sbjct: 99 RECSRTIQAHDGFVRGLCVRFCGTSFFTVGDDKTVKQWAMESPGYGEKVEPMRTILGKTV 158
Query: 505 FDALETQFKGS--KTTGDQADLINNLYQGKMRDY 536
F ++ K + T G Q D+ + MR Y
Sbjct: 159 FTGIDHHVKDAVFATCGQQVDIWDEQRSAPMRSY 192
>sp|Q9NV06|DCA13_HUMAN DDB1- and CUL4-associated factor 13 OS=Homo sapiens GN=DCAF13 PE=1
SV=2
Length = 445
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREY+RALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP KL+T++SGA DGEV++WNLT ++C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + D PLHTI+ K+V + I H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R PI + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 101/140 (72%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PRE
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPRE--------------------- 40
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
Y+RALNATKLERVFAKPF+A+LDGH+DG++CLAKHP KL+T++SGA DGEV++WNLT
Sbjct: 41 --YIRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQ 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
++C++T QAH+G VR TR
Sbjct: 99 RNCIRTIQAHEGFVRGICTR 118
>sp|Q5R4T8|DCA13_PONAB DDB1- and CUL4-associated factor 13 OS=Pongo abelii GN=DCAF13 PE=2
SV=1
Length = 445
Score = 285 bits (728), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 172/231 (74%), Gaps = 2/231 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L+T++SGA DGEV++WNLT ++C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + D PLHTI+ K+V + I H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R P+ + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 100/140 (71%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PRE
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPRE--------------------- 40
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
YVRALNATKLERVFAKPF+A+LDGH+DG++CLAKHP L+T++SGA DGEV++WNLT
Sbjct: 41 --YVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQ 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
++C++T QAH+G VR TR
Sbjct: 99 RNCIRTIQAHEGFVRGICTR 118
>sp|Q6PAC3|DCA13_MOUSE DDB1- and CUL4-associated factor 13 OS=Mus musculus GN=Dcaf13 PE=2
SV=2
Length = 445
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 171/231 (74%), Gaps = 2/231 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK I R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L++++SGA DGEVK+WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + + PL+T++ K+V + I H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R P+ + +W DS+ V+FNP++ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 99/140 (70%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ +LSRNPD Y+RETK I R+PRN DP+LHPFE PRE
Sbjct: 2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPRE--------------------- 40
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
YVRALNATKLERVFAKPF+A+LDGH+DG++CLAKHP L++++SGA DGEVK+WNLT
Sbjct: 41 --YVRALNATKLERVFAKPFLASLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTK 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
+ C++T QAH+G VR TR
Sbjct: 99 RKCIRTIQAHEGFVRGMCTR 118
>sp|Q5ZLK1|DCA13_CHICK DDB1- and CUL4-associated factor 13 OS=Gallus gallus GN=DCAF13 PE=2
SV=1
Length = 445
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 168/226 (74%), Gaps = 1/226 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VLSRNPD+Y+RETK + R+PRN DP+LHPFE REYVRALNATKLERVFAKPF+++LD
Sbjct: 4 KVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLSSLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEV++WNLT + C++ QAH+G VR +C G+
Sbjct: 64 GHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W E + P+HTI+ K+V + I H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMESPGYGEEEEPIHTILGKTVYTGIDHHWKDAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT 335
+R P+ + +W DS+ V+FNPI+ ++L SCASDR+I+LYD R +
Sbjct: 184 QRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQS 229
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 97/140 (69%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
R VLSRNPD+Y+RETK + R+PRN DP+LHPFE REYV
Sbjct: 2 RVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYV------------------- 42
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
RALNATKLERVFAKPF+++LDGH+DG++C+AKHP LST++SGA DGEV++WNLT
Sbjct: 43 ----RALNATKLERVFAKPFLSSLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTK 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
+ C++ QAH+G VR R
Sbjct: 99 RQCIRALQAHEGFVRGMCAR 118
>sp|Q803X4|DCA13_DANRE DDB1- and CUL4-associated factor 13 OS=Danio rerio GN=dcaf13 PE=2
SV=1
Length = 445
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 166/237 (70%), Gaps = 1/237 (0%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RET I R+PRN DP+LHPFE PREY RALNATKLERVFAKPFVA+LD
Sbjct: 4 KVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ISC+ KH LST+ISGA DGEVKVWNL + C +T QAH+G VR +C G+
Sbjct: 64 GHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEH 289
F +VG D TIK W+ E P++TI+ K+V + I H ++ F TCG +W+
Sbjct: 124 FFTVGDDKTIKQWNMEAPGYGVREEPINTILGKAVFTGIDHHQREGTFVTCGQTVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346
+R+ P+ +FSW VDS V++NP++ +LASCASDRSI+LYDTR + R LR
Sbjct: 184 QRSSPVLSFSWGVDSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLRKVIMQLR 240
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 92/140 (65%), Gaps = 23/140 (16%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392
+ VL RNPD+Y+RET I R+PRN DP+LHPFE PRE
Sbjct: 2 KVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPRE--------------------- 40
Query: 393 REYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452
Y RALNATKLERVFAKPFVA+LDGH+D ISC+ KH LST+ISGA DGEVKVWNL
Sbjct: 41 --YTRALNATKLERVFAKPFVASLDGHRDVISCITKHAKSLSTVISGACDGEVKVWNLPK 98
Query: 453 QSCVQTYQAHDGHVRDTSTR 472
+ C +T QAH+G VR +R
Sbjct: 99 RECTRTVQAHEGFVRGICSR 118
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/169 (69%), Positives = 145/169 (85%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 231 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 286
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYVKCLECG E R DTFLDIPL +RPFGS+ A+G + EA++AF++PETLDG N
Sbjct: 287 YQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPETLDGPN 346
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C +KCDA KGLKF FPYLLTL L RFDFDY++MHRIKLND++
Sbjct: 347 QYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRM 395
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 96/114 (84%), Gaps = 9/114 (7%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE---TSITYQLQKLFVNLQTSTRPAVE 57
MTCYLNSL+Q LFMTPEFRNA+YKW++E +EE +SI YQLQ+LFV LQTS + A+E
Sbjct: 181 MTCYLNSLLQTLFMTPEFRNALYKWEFEE--SEEDPVSSIPYQLQRLFVLLQTSKKRAIE 238
Query: 58 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 239 TTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 288
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 262 bits (669), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 116/169 (68%), Positives = 144/169 (85%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 230 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 285
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYVKCLECG E R DTFLDIPL +RP+GS+ A+G + EA+ AF++PETLDG N
Sbjct: 286 YQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPN 345
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C +KCDA KGLKF FPYLLTL L RFDFDY++MHRIKLND++
Sbjct: 346 QYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRM 394
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 96/114 (84%), Gaps = 9/114 (7%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE---TSITYQLQKLFVNLQTSTRPAVE 57
MTCYLNSL+Q LFMTPEFRNA+YKW++E +EE +SI YQLQ+LFV LQTS + A+E
Sbjct: 180 MTCYLNSLLQTLFMTPEFRNALYKWEFEE--SEEDPVSSIPYQLQRLFVLLQTSKKRAIE 237
Query: 58 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 238 TTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 287
>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47
PE=1 SV=3
Length = 1375
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/169 (67%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 245 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 300
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 96/114 (84%), Gaps = 9/114 (7%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE---TSITYQLQKLFVNLQTSTRPAVE 57
MTCYLNSL+Q LFMTPEFRNA+YKW++E +EE TSI YQLQ+LFV LQTS + A+E
Sbjct: 195 MTCYLNSLLQTLFMTPEFRNALYKWEFEE--SEEDPVTSIPYQLQRLFVLLQTSKKRAIE 252
Query: 58 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 253 TTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 302
>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus GN=Usp47
PE=1 SV=2
Length = 1376
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/169 (67%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 245 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 300
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 97/114 (85%), Gaps = 9/114 (7%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE---TSITYQLQKLFVNLQTSTRPAVE 57
MTCYLNSL+Q LFMTPEFRNA+YKW++E+ +EE TSI YQLQ+LFV LQTS + A+E
Sbjct: 195 MTCYLNSLLQTLFMTPEFRNALYKWEFED--SEEDPVTSIPYQLQRLFVLLQTSKKRAIE 252
Query: 58 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 253 TTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 302
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 256 bits (654), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 113/169 (66%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 244 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 299
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GS+ A+ + EA+ AF++PE LDG N
Sbjct: 300 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN 359
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 360 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 408
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 96/114 (84%), Gaps = 9/114 (7%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE---TSITYQLQKLFVNLQTSTRPAVE 57
MTCYLNSL+Q LFMTPEFRNA+YKW++E +EE TSI YQLQ+LFV LQTS + A+E
Sbjct: 194 MTCYLNSLLQTLFMTPEFRNALYKWEFEE--SEEDPVTSIPYQLQRLFVLLQTSKKRAIE 251
Query: 58 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 252 TTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 301
>sp|Q7KWL3|DCA13_DICDI DDB1- and CUL4-associated factor 13 OS=Dictyostelium discoideum
GN=wdsof1 PE=3 SV=1
Length = 445
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 153/227 (67%), Gaps = 6/227 (2%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+V+SR+ +E +E + + ++ RN+DP+LHPFE PREYVRALNATKL+RVFAKPF+ +L
Sbjct: 4 KVISRSEEEETKEKASDVRKLHRNLDPNLHPFERPREYVRALNATKLDRVFAKPFIGSLS 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH DGI + +HPT L+ + SG+ DG +K+WNLTS + T QAH+G VR + F PDG
Sbjct: 64 GHTDGIFTMTRHPTLLNNVASGSCDGVIKLWNLTSLTERTTVQAHNGFVRGLVFTPDGKH 123
Query: 231 FLSVGIDNTIKTWSSELSE---SDHIVPLHTIISKSVISSISHQRKSKIFATCG-DQCQL 286
+S G D TIK W +L E + ++ ++ K+ +SI HQ S FAT G ++
Sbjct: 124 MVSCGEDKTIKMWKLDLPEYTFNQEVISIYN--GKNAFTSIDHQLNSTTFATSGPTSVEI 181
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+H+R+ PI+ W ++ V+FNPI+ H+LASC +DR IILYD R
Sbjct: 182 WKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDIILYDIR 228
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 83/132 (62%), Gaps = 23/132 (17%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395
V+SR+ +E +E + + ++ RN+DP+LHPFE PRE Y
Sbjct: 5 VISRSEEEETKEKASDVRKLHRNLDPNLHPFERPRE-----------------------Y 41
Query: 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC 455
VRALNATKL+RVFAKPF+ +L GH DGI + +HPT L+ + SG+ DG +K+WNLTS +
Sbjct: 42 VRALNATKLDRVFAKPFIGSLSGHTDGIFTMTRHPTLLNNVASGSCDGVIKLWNLTSLTE 101
Query: 456 VQTYQAHDGHVR 467
T QAH+G VR
Sbjct: 102 RTTVQAHNGFVR 113
>sp|P33750|DCA13_YEAST Protein SOF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SOF1 PE=1 SV=1
Length = 489
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 139/247 (56%), Gaps = 24/247 (9%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+ + R+ D+Y+ T ++PRN++P LHPFE REY +ALNATKLER+FAKPFV L
Sbjct: 4 KTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLG 63
Query: 171 -GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL---- 225
GH+DG+ +AK+ L+ + +G+ DG +K WN++++ +++AH G V +C
Sbjct: 64 YGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRF 123
Query: 226 ----PD-GSQ--FLSVGIDNTIKTWSSEL--------SESDHIVP----LHTIISKSVIS 266
PD SQ LS D T+K WS + S++D + + T +S
Sbjct: 124 HDKKPDLKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDSVTNEEGLIRTFDGESAFQ 183
Query: 267 SISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRS 326
I R++ FAT G + LW+ R +P+ SW D++ ++FN + ILAS SD S
Sbjct: 184 GIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNETDILASTGSDNS 243
Query: 327 IILYDTR 333
I+LYD R
Sbjct: 244 IVLYDLR 250
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 22/131 (16%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395
+ R+ D+Y+ T ++PRN++P LHPFE REY +ALNATKLER+FAKPFVG Y
Sbjct: 5 TIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLGY 64
Query: 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC 455
GH+DG+ +AK+ L+ + +G+ DG +K WN++++
Sbjct: 65 ----------------------GHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREE 102
Query: 456 VQTYQAHDGHV 466
+++AH G V
Sbjct: 103 FVSFKAHYGLV 113
>sp|O74340|DCA13_SCHPO Protein sof1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sof1 PE=3 SV=1
Length = 436
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 7/206 (3%)
Query: 131 IPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTI 189
+ RN+DPSLHPFE REY RALNATK++R+FA PF+ L GH+DG+ LA+ L
Sbjct: 21 VKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARDTKTLIDC 80
Query: 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
SG+ DG VK+W+ + + T +AH+G VR + F G LS D + L++
Sbjct: 81 ASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQG-DVLSCASDRYVYM----LNK 135
Query: 250 SDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQ 309
D V + + S + I + +FAT G+ +W++ R+ P+ F W D+L V+
Sbjct: 136 QDGKVK-RSYLGDSSLLDIDTSKGGDLFATSGENVSIWDYSRDTPVTKFEWGADTLPVVK 194
Query: 310 FNPIDKHILASCASDRSIILYDTRAT 335
FN + +LAS DRSI++YD R +
Sbjct: 195 FNYTETSVLASAGMDRSIVIYDLRTS 220
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 73/136 (53%), Gaps = 31/136 (22%)
Query: 332 TRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391
TR T L+R D+ + RN+DPSLHPFE REY RALNATK++R+FA PF+G
Sbjct: 7 TRGTSLTRLNDQ---------DPVKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLG 57
Query: 392 PREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT 451
+L R GH+DG+ LA+ L SG+ DG VK+W+ +
Sbjct: 58 -----------QLGR-----------GHQDGVYSLARDTKTLIDCASGSGDGAVKLWDAS 95
Query: 452 SQSCVQTYQAHDGHVR 467
+ T +AH+G VR
Sbjct: 96 ERCERWTSKAHEGIVR 111
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 101/167 (60%), Gaps = 11/167 (6%)
Query: 472 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQG 531
R V TT+LTRSFGW S D++ QHDIQE RVL D LE + KG++ + +N+++ G
Sbjct: 287 REPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEV----ENALNDIFVG 342
Query: 532 KMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYF 591
KM+ YVKC++ E SR + F DI L V+ + + ++ R ++ ETL G N+Y+
Sbjct: 343 KMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDT------LEDSFRDAIQVETLTGDNKYY 396
Query: 592 CDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ G + DAHKG+ F P +L L L RFD+D +K+ND+ E
Sbjct: 397 AEGHGLQ-DAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHE 442
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q+LF T FR VYK +ND + + S+ Y LQ++F NL+ P V TT+L
Sbjct: 238 TCYMNSLLQSLFFTNIFRKTVYKIPTDNDDSRD-SVAYALQRVFYNLEKQREP-VSTTEL 295
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLI 106
TRSFGW S D++ QHDIQE RVL D LE + KG++ D+
Sbjct: 296 TRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEVENALNDIF 340
>sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster
GN=Usp7 PE=1 SV=1
Length = 1129
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 12/167 (7%)
Query: 472 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQG 531
RP V T LT+SFGWE+ D++ QHD+QE RVL D LE++ KG+ G I L++G
Sbjct: 299 RP-VGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEG----TIPGLFEG 353
Query: 532 KMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYF 591
KM Y+KC +R +TF DI L ++ +I E+ + +V PETL+G N+Y
Sbjct: 354 KMSSYIKCKNVDYNSTRYETFYDIQLNIK------DKKNIYESFQDYVAPETLEGDNKYD 407
Query: 592 CDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + +A KG+ FT FP +L LHLMRF +D T IK ND+ E
Sbjct: 408 AGVHGLQ-EASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFE 453
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q L+ T R +VY+ E D + + S+ LQ++F LQ RP V T L
Sbjct: 249 TCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSK-SVGLSLQRVFHELQFGDRP-VGTKKL 306
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGWE+ D++ QHD+QE RVL D LE++ KG+ G
Sbjct: 307 TKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEG 345
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 11/164 (6%)
Query: 475 VETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMR 534
++T +LTRSFGW++++++ QHD+QEL R+L D LE KG+ G +N ++ GKM+
Sbjct: 265 LDTLELTRSFGWDTAESFTQHDVQELNRILMDRLENNMKGTPVEGK----LNEIFVGKMK 320
Query: 535 DYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDK 594
Y+KC+ E +R + F D+ L V+ F ++ E+ ++ E ++G NQY
Sbjct: 321 SYIKCINVDYESARVEDFWDLQLNVKNF------KNLQESFDNYIEMELMNGENQYAAQD 374
Query: 595 CGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + DA KG+ F FP +L L L RF++D++ +K+NDK E
Sbjct: 375 YGLQ-DAQKGVIFESFPPVLHLQLKRFEYDFNYDQMVKVNDKYE 417
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCYLNSL+Q+ F T FR VY+ E++ + S+ LQ+ F LQ S P ++T +L
Sbjct: 213 TCYLNSLLQSYFFTKYFRKLVYEIPTEHE-SPNNSVPLALQRAFYQLQVSDIP-LDTLEL 270
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
TRSFGW++++++ QHD+QEL R+L D LE KG+ G
Sbjct: 271 TRSFGWDTAESFTQHDVQELNRILMDRLENNMKGTPVEG 309
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 89/150 (59%), Gaps = 11/150 (7%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AVET LTR+FGW+ DA+ QHD+QE CRVL D LET+ KG+ + I NL++G M
Sbjct: 249 AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTS----EEKSIPNLFRGNM 304
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ Y+KCL+ E SR ++F D+ L V + + A A+ PETLD N+Y
Sbjct: 305 KSYIKCLDVDYESSRTESFYDVQLNV------LGMDSLERAFDAYTTPETLDDDNKYDAG 358
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
G + A KG+KF E P +L + LMRF +
Sbjct: 359 DHGLQ-RAEKGVKFVELPPVLHVQLMRFQY 387
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++Q+ + T FR AVY + + E++I +Q++F LQ S+ AVET L
Sbjct: 198 TCYMNSILQSFYFTTGFRRAVYNMEVGTE-PNESNIVLAMQRVFYELQMSSE-AVETNSL 255
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGS 96
TR+FGW+ DA+ QHD+QE CRVL D LET+ KG+
Sbjct: 256 TRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGT 290
>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp5 PE=3 SV=3
Length = 1108
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 11/164 (6%)
Query: 475 VETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMR 534
V TT+LT+SFGW+S D++ QHD+QE RVL D LE + +K + + NL+ GKM+
Sbjct: 273 VSTTELTKSFGWDSLDSFMQHDVQEFNRVLQDNLERSMRDTKV----ENALTNLFVGKMK 328
Query: 535 DYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDK 594
Y+ C+ E +R + + DI L V+ ++ ++ R++++ ETL+G N YF D
Sbjct: 329 SYIACVNVNFESARSEDYWDIQLNVK------GMKNLEDSFRSYIQVETLEGDNCYFADT 382
Query: 595 CGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + +A KG+ F FP +L L L RF++D+ IK+ND+ E
Sbjct: 383 YGFQ-EAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYE 425
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q+L++ FR VY+ ++ ++ SI Y LQ+ F NLQ P V TT+L
Sbjct: 221 TCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKD-SIAYALQRCFYNLQFMNEP-VSTTEL 278
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLI 106
T+SFGW+S D++ QHD+QE RVL D LE + +K +L
Sbjct: 279 TKSFGWDSLDSFMQHDVQEFNRVLQDNLERSMRDTKVENALTNLF 323
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 12/169 (7%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG----TIPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK------GKKNIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG 319
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 12/169 (7%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 270 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG----TIPKLF 324
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ +I E+ +V E LDG N+
Sbjct: 325 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK------GKKNIFESFVDYVAVEQLDGDNK 378
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 379 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 426
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 222 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 279
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G
Sbjct: 280 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG 318
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 11/150 (7%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AVET LTR+FGW+ DA+ QHD+QE CRVL D LET+ KG+ + I NL++G M
Sbjct: 252 AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTS----EEKSIPNLFRGNM 307
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ Y+KCL+ E SR ++F D+ L V + + A A+ E LD N+Y
Sbjct: 308 KSYIKCLDVDYESSRTESFYDVQLNV------LGMDSLERAFEAYTTSEILDDENKYDAG 361
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
G + A KG+KF E P +L + LMRF +
Sbjct: 362 DHGLQ-RAEKGVKFVELPPILHVQLMRFQY 390
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++Q+ + T FR AVY + E++I +Q++F LQ ++ AVET L
Sbjct: 201 TCYMNSILQSFYFTTGFRRAVYNMDVGTE-PNESNIVLAMQRVFYELQMASE-AVETNSL 258
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGS 96
TR+FGW+ DA+ QHD+QE CRVL D LET+ KG+
Sbjct: 259 TRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGT 293
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 12/169 (7%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG----TIPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C + R + + DI L ++ +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKDVDYRSDRREDYYDIQLSIK------GKKNIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG 319
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 96/169 (56%), Gaps = 12/169 (7%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 270 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG----TIPKLF 324
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ +I E+ +V E LDG N+
Sbjct: 325 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK------GKKNIFESFIDYVAVEQLDGDNK 378
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 379 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 426
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 222 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 279
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G
Sbjct: 280 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEG 318
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 11/165 (6%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
+V T +LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G I L++G
Sbjct: 259 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG----TIQQLFEGHH 314
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+Y++C+ + +R+++F D+ L V+ D+ + +V E L+G N+Y +
Sbjct: 315 MNYIECINVDFKSTRKESFYDLQLDVK------GCKDVYASFDKYVEVERLEGDNKYHAE 368
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + DA KG+ F +FP +L L L RF++D+ +K+ND+ E
Sbjct: 369 GHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 412
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q L+ P FR AVY + A SI LQ LF LQ + +V T +L
Sbjct: 207 TCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT-SVATKEL 265
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGW++ D++ QHD+QEL RVL + LE + KG+ G
Sbjct: 266 TKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG 304
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 97/165 (58%), Gaps = 11/165 (6%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
+V T +LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G I L++G
Sbjct: 258 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG----TIQKLFEGHH 313
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+Y++C+ + +R+++F D+ L V+ D+ + +V E L+G N+Y +
Sbjct: 314 MNYIECINVDYKSTRKESFYDLQLDVK------GCKDVYASFDKYVEVERLEGDNKYHAE 367
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ DA KG+ F +FP +L L L RF++D+ +K+ND+ E
Sbjct: 368 GHDLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 411
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q L+ P FR AVY + A SI LQ LF LQ + +V T +L
Sbjct: 206 TCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT-SVATKEL 264
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T+SFGW++ D++ QHD+QEL RVL + LE + KG+ G
Sbjct: 265 TKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG 303
>sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40
PE=2 SV=3
Length = 1235
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A T DLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLI LY G +
Sbjct: 111 AASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIYRLYHGTI 166
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC R++ FLD+ + V+ + D + M +V E D N Y C
Sbjct: 167 VNQIVCKECKNVSERQEDFLDLTVAVK---NVSGLEDALWNM--YVEEEVFDCDNLYHCG 221
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 222 TCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYK 260
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYE---------NDIAEETSITYQLQKLFVNLQTST 52
TCYLNSL+Q L TPEFR A++ E A+ I QLQ+LF L
Sbjct: 49 TCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLFAQLLLLD 108
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A T DLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLI LY
Sbjct: 109 QEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIYRLY 162
>sp|Q8BWR4|UBP40_MOUSE Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus GN=Usp40
PE=1 SV=2
Length = 1235
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A T DLT SFGW + + +QHD+QEL R+LF ALET G T+G DLI+ LY G +
Sbjct: 111 AASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLYHGTI 166
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC R++ FLD+ + V+ G E +V E D N Y C
Sbjct: 167 VNQIVCKECKNISERQEDFLDLTVAVKNVS-----GLEDELCNMYVEEEIFDYDNLYHCG 221
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 222 TCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYK 260
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETS---------ITYQLQKLFVNLQTST 52
TCYL+SL+Q L TPEFR A++ E + E I QLQ+LF L
Sbjct: 49 TCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLD 108
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A T DLT SFGW + + +QHD+QEL R+LF ALET G T+G DLI+ LY
Sbjct: 109 QEAASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLY 162
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 16/316 (5%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH + +A P + + SG+ D +K+W+ S +C QT + H G V+ V F PD
Sbjct: 878 TLEGHGGSVWSVAFSPDR-ERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPD 936
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ-CQL 286
G + S D+TIK W + + H SV+S ++ + GD+ ++
Sbjct: 937 GQRVASGSDDHTIKIWDAASGTCTQTLEGH---GSSVLSVAFSPDGQRVASGSGDKTIKI 993
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346
W+ + + S+ V F+P D +AS + D++I ++DT + ++ + +
Sbjct: 994 WDTASGTCTQTLEGHGGSVWSVAFSP-DGQRVASGSDDKTIKIWDTASGTCTQTLEGHGG 1052
Query: 347 ETKTSI-----HRIPRNIDP-SLHPFEGPREYVRALNATKLERVFAKPFV--GPREYVRA 398
++ + R+ D ++ ++ + V++ F G R +
Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGS 1112
Query: 399 LNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ 457
++ T K+ + L+GH + +A P + SG+ DG +K+W+ S +C Q
Sbjct: 1113 IDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDG-QRVASGSIDGTIKIWDAASGTCTQ 1171
Query: 458 TYQAHDGHVRDTSTRP 473
T + H G V+ + P
Sbjct: 1172 TLEGHGGWVQSVAFSP 1187
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 44/309 (14%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH + +A P + SG+ D +K+W+ S +C QT + H G V V F PD
Sbjct: 962 TLEGHGSSVLSVAFSPDG-QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPD 1020
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ--CQ 285
G + S D TIK W + + H +SV+ S QR A+ D +
Sbjct: 1021 GQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR----VASGSDDHTIK 1076
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYL 345
+W+ + + DS+ V F+P D +AS + D +I ++D + ++
Sbjct: 1077 IWDAVSGTCTQTLEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQT----- 1130
Query: 346 RETKTSIHRIPRNIDPSLHPFEGPREYVRALN-ATKLERVFAKPFVGPREYVRALNATKL 404
EG +V ++ + +RV + G + A + T
Sbjct: 1131 --------------------LEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCT 1170
Query: 405 ERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464
+ L+GH + +A P + SG+ D +K+W+ S +C QT + H G
Sbjct: 1171 Q---------TLEGHGGWVQSVAFSPDG-QRVASGSSDKTIKIWDTASGTCTQTLEGHGG 1220
Query: 465 HVRDTSTRP 473
V+ + P
Sbjct: 1221 WVQSVAFSP 1229
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH D + +A P + SG+ DG +K+W+ S +C QT + H G V V F PD
Sbjct: 1088 TLEGHGDSVWSVAFSPDG-QRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPD 1146
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLW 287
G + S ID TIK W + + H +SV S QR + + ++W
Sbjct: 1147 GQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVAS--GSSDKTIKIW 1204
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
+ + + + V F+P D +AS +SD +I ++DT
Sbjct: 1205 DTASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIWDT 1248
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 134/327 (40%), Gaps = 38/327 (11%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH + +A + SG+ D +K+W+ S + QT + H G V V F PD
Sbjct: 836 TLEGHGSSVLSVA-FSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPD 894
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ--CQ 285
+ S D TIK W + + H +SV S QR A+ D +
Sbjct: 895 RERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR----VASGSDDHTIK 950
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSR------ 339
+W+ + + S+ V F+P D +AS + D++I ++DT + ++
Sbjct: 951 IWDAASGTCTQTLEGHGSSVLSVAFSP-DGQRVASGSGDKTIKIWDTASGTCTQTLEGHG 1009
Query: 340 --------NPDEYLRETKTSIHRIPRNIDPS----LHPFEGPREYVRALNATKLERVFAK 387
+PD R S + + D + EG +V+++ VF+
Sbjct: 1010 GSVWSVAFSPDGQ-RVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSV-------VFSP 1061
Query: 388 PFVGPREYVRALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVK 446
G R + + T K+ + L+GH D + +A P + SG+ DG +K
Sbjct: 1062 D--GQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDG-QRVASGSIDGTIK 1118
Query: 447 VWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+W+ S +C QT + H G V + P
Sbjct: 1119 IWDAASGTCTQTLEGHGGWVHSVAFSP 1145
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 43/274 (15%)
Query: 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTII 260
WN +C QT + H V V F DG + S D TIK W + + H
Sbjct: 830 WN----ACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGH--- 882
Query: 261 SKSVISSISHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILA 319
SV S + ++ + D+ ++W+ + + + V F+P D +A
Sbjct: 883 GGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVA 941
Query: 320 SCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNAT 379
S + D +I ++D + ++ L +S+ + + D G R + + T
Sbjct: 942 SGSDDHTIKIWDAASGTCTQT----LEGHGSSVLSVAFSPD-------GQRVASGSGDKT 990
Query: 380 KLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISG 439
K+ + L+GH + +A P + SG
Sbjct: 991 ----------------------IKIWDTASGTCTQTLEGHGGSVWSVAFSPDG-QRVASG 1027
Query: 440 AYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+ D +K+W+ S +C QT + H G V+ P
Sbjct: 1028 SDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSP 1061
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 147/321 (45%), Gaps = 22/321 (6%)
Query: 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 214
KL V + L GH+ + +A HP T+ S + D +K+W++ +C+QT
Sbjct: 708 VKLWSVRDGVCIKTLTGHEHEVFSVAFHPDG-ETLASASGDKTIKLWDIQDGTCLQTLTG 766
Query: 215 HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS 274
H VR V F PDG+ S D+TIK W + + HT +SV S Q
Sbjct: 767 HTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQ--- 823
Query: 275 KIFATCGDQ-CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+ + GD+ ++W + E ++ + + +S++ + ++P D IL S + DR+I L+D +
Sbjct: 824 TLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP-DSKILVSGSGDRTIKLWDCQ 882
Query: 334 ATVLSRNPDEYLRETKTSIHRIPR-------NIDPSLHPFEGPREYVRALNATKLERVFA 386
+ + + E S+ P ++D S+ + + L A +A
Sbjct: 883 THICIKTLHGHTNEV-CSVAFSPDGQTLACVSLDQSVRLWNC--RTGQCLKAWYGNTDWA 939
Query: 387 KP--FVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTIISGAY 441
P F R+ + + + K +++ ++++L+GH D I +A P T+ S +
Sbjct: 940 LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDS-QTLASAST 998
Query: 442 DGEVKVWNLTSQSCVQTYQAH 462
D V++WN+++ C Q H
Sbjct: 999 DSSVRLWNISTGQCFQILLEH 1019
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 142/324 (43%), Gaps = 34/324 (10%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH D + C+A P +T+ S A D +K+W+++ C++T ++H G VR V F DG
Sbjct: 764 LTGHTDWVRCVAFSPDG-NTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADG 822
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFAT-CGDQ-CQL 286
S D TIK W+ E HT + + SI++ SKI + GD+ +L
Sbjct: 823 QTLASGSGDRTIKIWNYHTGECLKTYIGHT----NSVYSIAYSPDSKILVSGSGDRTIKL 878
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR------------- 333
W+ + + I+ + + + V F+P D LA + D+S+ L++ R
Sbjct: 879 WDCQTHICIKTLHGHTNEVCSVAFSP-DGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTD 937
Query: 334 -ATVLSRNPDEYLRETKT---SIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPF 389
A ++ +PD + + + ++ + EG +++ + + + A
Sbjct: 938 WALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASA- 996
Query: 390 VGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449
VR N + + F L+ H D + + HP I +G+ D VK+WN
Sbjct: 997 -STDSSVRLWNIST-----GQCFQILLE-HTDWVYAVVFHPQG-KIIATGSADCTVKLWN 1048
Query: 450 LTSQSCVQTYQAHDGHVRDTSTRP 473
+++ C++T H + + P
Sbjct: 1049 ISTGQCLKTLSEHSDKILGMAWSP 1072
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 160/428 (37%), Gaps = 72/428 (16%)
Query: 68 ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTS 127
++ D ++ I + + L + L T+F G ++ N L +LSR + +ET +
Sbjct: 535 QAKDYVRESQISLILQPLINQLITEF------GSLENISNCLVHILSRLRGKSPQETGYA 588
Query: 128 IHRIPR-----NIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKH 182
+ +D S + F G + L L V D +SC
Sbjct: 589 GGNVLNLLHHAQVDLSGYDFSGLTVWQAYLQGVNLHDV---------DFANSDLSCCVFT 639
Query: 183 PTKLSTIISGAY------------DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
T L I+S A+ D V+VW + S + + H VR V F PDG
Sbjct: 640 ET-LGNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEI 698
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ-CQLWEH 289
S G D +K WS + H V S H + + GD+ +LW+
Sbjct: 699 LASCGADENVKLWSVRDGVCIKTLTGH---EHEVFSVAFHPDGETLASASGDKTIKLWDI 755
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETK 349
+ ++ + + D + V F+P D + LAS A+D +I L+D + + LR K
Sbjct: 756 QDGTCLQTLTGHTDWVRCVAFSP-DGNTLASSAADHTIKLWDV-------SQGKCLRTLK 807
Query: 350 TSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA 409
+ +VR++ + + A G R K+
Sbjct: 808 SHTG------------------WVRSVAFSADGQTLASG-SGDR-------TIKIWNYHT 841
Query: 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDT 469
+ GH + + +A P ++SG+ D +K+W+ + C++T H V
Sbjct: 842 GECLKTYIGHTNSVYSIAYSPDS-KILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSV 900
Query: 470 STRPAVET 477
+ P +T
Sbjct: 901 AFSPDGQT 908
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231
H D + + HP I +G+ D VK+WN+++ C++T H + + + PDG
Sbjct: 1019 HTDWVYAVVFHPQG-KIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLL 1077
Query: 232 LSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-DQ-CQLWEH 289
S D +++ W I+ H S V S+I +I ATC DQ ++W+
Sbjct: 1078 ASASADQSVRLWDCCTGRCVGILRGH---SNRVYSAI-FSPNGEIIATCSTDQTVKIWDW 1133
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
++ + ++ + + + + + F+P D ILAS + D+++ ++D
Sbjct: 1134 QQGKCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDV 1175
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 123/305 (40%), Gaps = 54/305 (17%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
++++L+GH D I +A P T+ S + D V++WN+++ C Q H V V F
Sbjct: 970 YISSLEGHTDFIYGIAFSPDS-QTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVF 1028
Query: 225 LPDGSQFLSVGIDNTIKTWS-------SELSE-SDHIVPLHTIISKSVISSISHQRKSKI 276
P G + D T+K W+ LSE SD I+ + +++S S + ++
Sbjct: 1029 HPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRL 1088
Query: 277 FATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATV 336
+ C +C + + + ++ F+P + I+A+C++D+++ ++D +
Sbjct: 1089 WDCCTGRC----------VGILRGHSNRVYSAIFSP-NGEIIATCSTDQTVKIWDWQQ-- 1135
Query: 337 LSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV 396
L G +V + + ++ A +
Sbjct: 1136 -----------------------GKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRI 1172
Query: 397 RALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456
+N K + GH +S +A P + SG+ D V++WN+ + C+
Sbjct: 1173 WDVNTGKCHHICI--------GHTHLVSSVAFSPDG-EVVASGSQDQTVRIWNVKTGECL 1223
Query: 457 QTYQA 461
Q +A
Sbjct: 1224 QILRA 1228
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+ L GH + + +A P + S ++D V++W++ + C H V V F
Sbjct: 1139 LKTLTGHTNWVFDIAFSPDG-KILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFS 1197
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIF 277
PDG S D T++ W+ + E I+ + I+ ++ K+ IF
Sbjct: 1198 PDGEVVASGSQDQTVRIWNVKTGECLQILRAKRLYEGMNITGVTGLTKATIF 1249
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 146/323 (45%), Gaps = 32/323 (9%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L G+ + L P + T+ +G+ D V++W+++S+ C+ T Q H V V F PDG
Sbjct: 1112 LQGYTSWVRFLVFSPNGV-TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDG 1170
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ-CQLW 287
+ S D T++ W S+ +I+ HT SV + + S + + DQ +LW
Sbjct: 1171 ATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSV---VFNPDGSTLASGSSDQTVRLW 1227
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT------------ 335
E ++ + F + ++ V FNP D +LAS +SD+++ L+D ++
Sbjct: 1228 EINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNW 1286
Query: 336 --VLSRNPDEYLRETKT---SIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
++ NPD + + + ++ + LH F+G +V ++ + + A
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASG-- 1344
Query: 391 GPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 450
+ VR + + E ++ GH + + + P + + SG+ D V++W++
Sbjct: 1345 SDDQTVRLWSISSGECLY------TFLGHTNWVGSVIFSPDG-AILASGSGDQTVRLWSI 1397
Query: 451 TSQSCVQTYQAHDGHVRDTSTRP 473
+S C+ T Q H+ V P
Sbjct: 1398 SSGKCLYTLQGHNNWVGSIVFSP 1420
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 42/304 (13%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH ++ + +P ST+ SG+ D V++W + S C+ T+Q H V V F PDG
Sbjct: 1196 LQGHTSWVNSVVFNPDG-STLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDG 1254
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFAT-CGDQ-CQL 286
S S D T++ W S+ H HT + ++S++ + A+ GDQ +L
Sbjct: 1255 SMLASGSSDKTVRLWDISSSKCLHTFQGHT----NWVNSVAFNPDGSMLASGSGDQTVRL 1310
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346
WE ++ + F + + V F+P D +LAS + D+++ L+ +
Sbjct: 1311 WEISSSKCLHTFQGHTSWVSSVTFSP-DGTMLASGSDDQTVRLWSISS------------ 1357
Query: 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLER 406
L+ F G +V ++ + + A +L
Sbjct: 1358 -------------GECLYTFLGHTNWVGSVIFSPDGAILASG--------SGDQTVRLWS 1396
Query: 407 VFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
+ + + L GH + + + P + + SG+ D V++WN++S C+ T H V
Sbjct: 1397 ISSGKCLYTLQGHNNWVGSIVFSPDG-TLLASGSDDQTVRLWNISSGECLYTLHGHINSV 1455
Query: 467 RDTS 470
R +
Sbjct: 1456 RSVA 1459
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 29/302 (9%)
Query: 189 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248
+ SG+ D V++W+++S C++T++ H VR V F P+ S D T++ W
Sbjct: 921 LASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSG 980
Query: 249 ESDHIVPLHTIISKSVISSISHQRKSKIFAT-CGDQ-CQLWEHERNEPIRAFSWNVDSLH 306
E +I HT + S++ + AT GDQ +LW+ ++ F + +
Sbjct: 981 ECLYIFQGHT----GWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVR 1036
Query: 307 HVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPF 366
V F+ D +LAS + D+++ L+D + S N L+ + + + + D ++
Sbjct: 1037 SVVFSS-DGAMLASGSDDQTVRLWD----ISSGNCLYTLQGHTSCVRSVVFSPDGAMLAS 1091
Query: 367 EGPREYVRALNATKLERVFAKPFVGPREYVRAL---------------NATKLERVFAKP 411
G + VR + + ++ G +VR L +L + +K
Sbjct: 1092 GGDDQIVRLWDISSGNCLYT--LQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK 1149
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
+ L GH + ++ +A P +T+ SG+ D V++W+++S C+ Q H V
Sbjct: 1150 CLYTLQGHTNWVNAVAFSPDG-ATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVF 1208
Query: 472 RP 473
P
Sbjct: 1209 NP 1210
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 31/305 (10%)
Query: 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246
+ + SG+ D V++W+++S +C+ T Q H VR V F PDG+ S G D ++ W +
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW--D 1102
Query: 247 LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLH 306
+S + + L S S + + +LW+ + + + + ++
Sbjct: 1103 ISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVN 1162
Query: 307 HVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTS-IHRIPRNIDPSLHP 365
V F+P D LAS + D+++ L+D +S + Y+ + TS ++ + N D S
Sbjct: 1163 AVAFSP-DGATLASGSGDQTVRLWD-----ISSSKCLYILQGHTSWVNSVVFNPDGSTLA 1216
Query: 366 FEGPREYVR--ALNATKLERVFAKPFVGPREYVRAL---------------NATKLERVF 408
+ VR +N++K F G +V ++ +L +
Sbjct: 1217 SGSSDQTVRLWEINSSKC----LCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDIS 1272
Query: 409 AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD 468
+ + GH + ++ +A +P S + SG+ D V++W ++S C+ T+Q H V
Sbjct: 1273 SSKCLHTFQGHTNWVNSVAFNPDG-SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSS 1331
Query: 469 TSTRP 473
+ P
Sbjct: 1332 VTFSP 1336
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 31/269 (11%)
Query: 217 GHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKI 276
G V V F PDG F + ++ W + + H S ++S+ + K+
Sbjct: 865 GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGH----NSWVNSVGFSQDGKM 920
Query: 277 FATCGDQ--CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334
A+ D +LW+ + ++ F + + V F+P + +LAS +SD+++ L+D
Sbjct: 921 LASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP-NSLMLASGSSDQTVRLWD--- 976
Query: 335 TVLSRNPDEYLRETKTS-IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPR 393
+S Y+ + T ++ + N+D S+ + VR + + + + F G
Sbjct: 977 --ISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYI--FQGHT 1032
Query: 394 EYVRAL---------------NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS 438
VR++ +L + + + L GH + + P + + S
Sbjct: 1033 SCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDG-AMLAS 1091
Query: 439 GAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
G D V++W+++S +C+ T Q + VR
Sbjct: 1092 GGDDQIVRLWDISSGNCLYTLQGYTSWVR 1120
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 139 LHPFEGPREYVRALN---------------ATKLERVFAKPFVANLDGHKDGISCLAKHP 183
LH F+G +V ++ +L + + + GH + + + P
Sbjct: 1319 LHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP 1378
Query: 184 TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243
+ + SG+ D V++W+++S C+ T Q H+ V + F PDG+ S D T++ W
Sbjct: 1379 DG-AILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLW 1437
Query: 244 SSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQ--CQLWEHERNEPIRAF 298
+ +S + + LH I+ + S++ I A+ D +LW+ + E I+
Sbjct: 1438 N--ISSGECLYTLHGHINS--VRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTL 1490
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 121/302 (40%), Gaps = 33/302 (10%)
Query: 191 SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES 250
+G G V+ W + + T + H+ V V F DG S D T++ W +
Sbjct: 881 TGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQC 940
Query: 251 DHIVPLHTIISKSVISSISHQRKSKIFAT-CGDQ-CQLWEHERNEPIRAFSWNVDSLHHV 308
HT S + S+ S + A+ DQ +LW+ E + F + ++ V
Sbjct: 941 LKTFKGHT----SRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSV 996
Query: 309 QFNPIDKHILASCASDRSIILYD----------------TRATVLSRNPDEYLRETKTSI 352
FN +D +LA+ + D+++ L+D R+ V S + +
Sbjct: 997 AFN-LDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQT 1055
Query: 353 HRI-PRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKP 411
R+ + L+ +G VR++ + + A G + VR L + +
Sbjct: 1056 VRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASG--GDDQIVR------LWDISSGN 1107
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
+ L G+ + L P + T+ +G+ D V++W+++S+ C+ T Q H V +
Sbjct: 1108 CLYTLQGYTSWVRFLVFSPNGV-TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAF 1166
Query: 472 RP 473
P
Sbjct: 1167 SP 1168
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 37/308 (12%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+ L GH+ I CL TKL ISG+ D +KVW+ S C+ TY H G V +C
Sbjct: 371 IRTLRGHESTIRCLQFDDTKL---ISGSLDRTIKVWSWRSGECISTYTGHQGGV--LCLH 425
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QC 284
D + S DNTIK W+ + +S I+ HT +V + + +F+ D
Sbjct: 426 FDSTTLASGSKDNTIKIWNFQ-DKSTQILRGHTDWVNAVKLDTASR---TVFSASDDLTV 481
Query: 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPID---KHILASCASDRSIILYDTRATVLSRNP 341
++W+ + + I ++ +V + V P + KH + C DRS L S +P
Sbjct: 482 RIWDLDTGKCIHTYAGHVGQVQQVLPLPREFEFKHT-SHCDDDRSDRLSG------SESP 534
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RAL 399
D +P P P + E +F + P Y+ AL
Sbjct: 535 DHRASHDSNHAPDLPTTSAPPTQPM-----------SPLFEALFNEDRPAPPRYMLTAAL 583
Query: 400 NAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT 458
++T +L V + GH +G+ LA +L +SGA D KVW+ + +C +T
Sbjct: 584 DSTLRLWEVHTGRCLRTFFGHIEGVWGLAADTLRL---VSGAQDHMTKVWDPRTGTCERT 640
Query: 459 YQAHDGHV 466
+ H G V
Sbjct: 641 FTGHRGPV 648
Score = 37.4 bits (85), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
L GH D ++ + K T T+ S + D V++W+L + C+ TY H G V+
Sbjct: 453 LRGHTDWVNAV-KLDTASRTVFSASDDLTVRIWDLDTGKCIHTYAGHVGQVQ 503
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W++ + ++T + H+ +R
Sbjct: 336 GHTNGVMCLQFDDNILAT---GSYDATIKIWDIETGKEIRTLRGHESTIR 382
>sp|A2QCU8|SCONB_ASPNC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=sconB PE=3 SV=1
Length = 670
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 129/310 (41%), Gaps = 48/310 (15%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+ L GH+ GI CL TKL ISG+ DG VKVWN + C+ TY H G V + F
Sbjct: 374 IRTLRGHESGIRCLQFDDTKL---ISGSMDGSVKVWNWRTGDCISTYTGHRGGVIGLHF- 429
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC- 284
D + S +D T+K W+ E +S ++ HT ++++ S+ + D C
Sbjct: 430 -DATILASASVDKTVKIWNFE-DKSTCLLRGHT----DWVNAVRVDTASRTVFSASDDCT 483
Query: 285 -QLWEHERNEPIRAFSWNVDSLHHVQFNP----IDKHILASCASDRSIILYDTRATVLSR 339
+LW+ + IR F +V + V P ++H + + S + DT L
Sbjct: 484 VRLWDLDTKSCIRTFHGHVGQVQQVVPLPREFEFEEHDVECENDNLSTVSGDTEPASL-- 541
Query: 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--R 397
+ ++ + PF GP F P Y+
Sbjct: 542 ---------QATLGLESNAVISQSSPF-GPS--------------FESGRTAPPRYIVTS 577
Query: 398 ALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456
AL++T +L + GH +G+ LA + I+SGA D +K+W+ + C
Sbjct: 578 ALDSTIRLWETSTGRCLRTFFGHLEGVWALAADTLR---IVSGAEDRMIKIWDPRTGKCE 634
Query: 457 QTYQAHDGHV 466
+T+ H G V
Sbjct: 635 RTFTGHSGPV 644
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAV 475
L GH D ++ + + T T+ S + D V++W+L ++SC++T+ H G V+
Sbjct: 456 LRGHTDWVNAV-RVDTASRTVFSASDDCTVRLWDLDTKSCIRTFHGHVGQVQ-------- 506
Query: 476 ETTDLTRSFGWESSDAWQQHD 496
+ L R F +E D ++D
Sbjct: 507 QVVPLPREFEFEEHDVECEND 527
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH +G+ LA + I+SGA D +K+W+ + C +T+ H G V C S+
Sbjct: 599 GHLEGVWALAADTLR---IVSGAEDRMIKIWDPRTGKCERTFTGHSGPV--TCIGLGDSR 653
Query: 231 FLSVGIDNTIKTWS 244
F + D ++ +S
Sbjct: 654 FATGSEDCEVRMYS 667
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W+ + ++T + H+ +R
Sbjct: 339 GHTNGVMCLQFEDNILAT---GSYDATIKIWDTDTGQEIRTLRGHESGIR 385
>sp|Q5RE63|UBP18_PONAB Ubl carboxyl-terminal hydrolase 18 OS=Pongo abelii GN=USP18 PE=2
SV=1
Length = 375
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV +L + + QHD +L L++ ++ Q T + + LY
Sbjct: 113 SRQKAVRPLELAYCLQKYNVPLFVQHDAAQLYLKLWNLMKDQI----TDVHLVERLQALY 168
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPV-----RPFGSSVAYGDIIEAMRAFVRPETL 584
+M+D + CL+C E SR + L +PL + +P + V D A+ F +P L
Sbjct: 169 MIRMKDSLICLDCAMESSRNSSMLTLPLSLFDVDSKPLKTLVGQED---ALHCFFQPREL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI 631
++ FC+ CGKK + LK T FP LT+HLMRF S +I
Sbjct: 226 SRKSKCFCENCGKKTHRKQVLKLTHFPQTLTIHLMRFSIRNSQTRKI 272
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETTD 60
TC LNSLIQ M +F + + E+ S+ +Q+ L +Q S + AV +
Sbjct: 63 TCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRSVPFQMLLLLEKMQDSRQKAVRPLE 122
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQF 93
L + + QHD +L L++ ++ Q
Sbjct: 123 LAYCLQKYNVPLFVQHDAAQLYLKLWNLMKDQI 155
>sp|P39967|UBP9_YEAST Ubiquitin carboxyl-terminal hydrolase 9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP9 PE=1 SV=1
Length = 754
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 511 QFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGD 570
+F KT + I +L++G + + +KCL C SR++ FLD P+ V+ + D
Sbjct: 459 RFGPQKTDNSNDNFITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEET----D 514
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
I + ++++ + E L+G N+++C+KC +A + + + P++L+LHL RF +
Sbjct: 515 IQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKSN 574
Query: 631 IKLNDKV 637
IKL +K+
Sbjct: 575 IKLFNKI 581
>sp|D4D8P3|SCONB_TRIVH Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Trichophyton verrucosum (strain HKI 0517) GN=sconB
PE=3 SV=1
Length = 663
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 131/310 (42%), Gaps = 36/310 (11%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+ L GH+ I CL TKL ISG+ D +KVWN S C+ TY H G V +C
Sbjct: 355 IRTLRGHESTIRCLQFDDTKL---ISGSLDRTIKVWNWRSGECISTYTGHQGGV--LCLH 409
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QC 284
D + S DNTIK W+ +S I+ H SV + + +F+ D
Sbjct: 410 FDSTTLASGSKDNTIKIWNFH-DKSTRILRGHADWVNSVKLDTASR---TVFSASDDLTV 465
Query: 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPID---KHILASCASDRSIILYDTRATVLSRNP 341
++W+ + + I +++ +V + V P + KH ++CA DRS L S +P
Sbjct: 466 RIWDLDTGKCIHSYAGHVGQVQQVLPLPREFEFKH-QSNCADDRSDRLSG------SESP 518
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEG--PREYVRALNATKLERVFAKPFVGPREYV--R 397
D H N P P P E + L +P P Y+
Sbjct: 519 DHR------GSHGYGSNNAPDQQPNTSAPPTEPMSPLFEALFTEDQGRP--APPRYMLTA 570
Query: 398 ALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456
AL+ T +L V + GH +G+ LA + +SGA D KVW+ + +C
Sbjct: 571 ALDLTLRLWEVHTGRCLRTFFGHIEGVWGLAADTLRF---VSGAQDHMAKVWDPRTGTCE 627
Query: 457 QTYQAHDGHV 466
+T+ H G V
Sbjct: 628 RTFTGHRGPV 637
Score = 36.6 bits (83), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W++ + ++T + H+ +R
Sbjct: 320 GHTNGVMCLQFDDNILAT---GSYDATIKIWDIETGKEIRTLRGHESTIR 366
>sp|A1C7E4|SCONB_ASPCL Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=sconB PE=3 SV=1
Length = 700
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 130/309 (42%), Gaps = 52/309 (16%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ GI CL TKL ISG+ D +KVWN + C+ TY H G V + F D
Sbjct: 407 LRGHESGIRCLQFDDTKL---ISGSMDRSLKVWNWRTGECISTYTGHRGGVIGLHF--DA 461
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC--QL 286
+ S +D T+K W+ E +S ++ HT ++++ S+ + D C +L
Sbjct: 462 TILASASVDKTVKIWNFE-DKSTCLLRGHT----DWVNAVRVDTNSRTVFSASDDCTIRL 516
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHIL---ASCASDR-SIILYDTRATVLSRNP- 341
W+ + IR F +V + V P + A C +D S+ D+ A P
Sbjct: 517 WDLDTKTCIRTFHGHVGQVQQVIPLPREFEFEDHDAECENDNVSVTSGDSPAASPRGIPG 576
Query: 342 -DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RA 398
D ET++S PF GP F P Y+ A
Sbjct: 577 LDAGTSETQSS-------------PF-GP--------------AFDNGRPAPPRYIVTSA 608
Query: 399 LNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ 457
L++T +L + GH +G+ LA + I+SGA D VK+W+ + C +
Sbjct: 609 LDSTIRLWETSTGRCLRTFFGHLEGVWALAADTLR---IVSGAEDRMVKIWDPRTGKCER 665
Query: 458 TYQAHDGHV 466
T+ H G V
Sbjct: 666 TFTGHSGPV 674
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAV 475
L GH D ++ + + T T+ S + D +++W+L +++C++T+ H G V+
Sbjct: 486 LRGHTDWVNAV-RVDTNSRTVFSASDDCTIRLWDLDTKTCIRTFHGHVGQVQ-------- 536
Query: 476 ETTDLTRSFGWESSDAWQQHD 496
+ L R F +E DA ++D
Sbjct: 537 QVIPLPREFEFEDHDAECEND 557
Score = 36.6 bits (83), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 408 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
+ + V GH +GI CL L+T G+YD +K+W+ + ++T + H+ +R
Sbjct: 359 YGRCSVKVFKGHTNGIMCLQFEDNILAT---GSYDATIKIWDTETGEELRTLRGHESGIR 415
>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila
melanogaster GN=faf PE=1 SV=2
Length = 2778
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 13/215 (6%)
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483
S L P+ STI G +D K +++ VQ AH GH P T +
Sbjct: 1731 SALVSLPSSSSTIEDGLHDVR-KNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHF-KL 1788
Query: 484 FGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECG 543
G E + +Q D E L ++L+ +G K G Q L+N G D C EC
Sbjct: 1789 LG-EPVNLREQQDAVEFFMSLLESLD---EGLKALG-QPQLMNATLGGSFSDQKICQECP 1843
Query: 544 TEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHK 603
S+E+ F + +R S + E++ +V+ E L+GA+ Y CDKC KK K
Sbjct: 1844 HRYSKEEPFSVFSVDIRNHSS------LTESLEQYVKGELLEGADAYHCDKCDKKVVTVK 1897
Query: 604 GLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ + P +L + L RF++DY + IK ND E
Sbjct: 1898 RVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFE 1932
>sp|Q86UV5|UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48
PE=1 SV=1
Length = 1035
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
S R ++ + ++ G D QQ D QE ++ LE K D +++
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQQQ 212
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
+ G+ C +CG E F ++ L ++ + + + + F++ E L+G N
Sbjct: 213 FCGEYAYVTVCNQCGRESKLLSKFYELELNIQ------GHKQLTDCISEFLKEEKLEGDN 266
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
+YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 267 RYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 69/195 (35%), Gaps = 51/195 (26%)
Query: 2 TCYLNSLIQALFMTPEFRNAVY-------KWKYENDIAEET-----SITYQLQKLFVNLQ 49
TCY+N+ +Q F+ E R A+Y + + I EE +I LQ LF LQ
Sbjct: 97 TCYVNTFLQVWFLNLELRQALYLCPSTCSDYMLGDGIQEEKDYEPQTICEHLQYLFALLQ 156
Query: 50 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 109
S R ++ + ++ G D QQ D QE ++ LE K
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQK------------ 201
Query: 110 YQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVA-- 167
NPD RNI F G YV N E F
Sbjct: 202 ------NPD-------------VRNI--VQQQFCGEYAYVTVCNQCGRESKLLSKFYELE 240
Query: 168 -NLDGHKDGISCLAK 181
N+ GHK C+++
Sbjct: 241 LNIQGHKQLTDCISE 255
>sp|D4AM37|SCONB_ARTBC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS
112371) GN=sconB PE=3 SV=1
Length = 663
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 131/310 (42%), Gaps = 36/310 (11%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+ L GH+ I CL TKL ISG+ D +KVWN S C+ TY H G V +C
Sbjct: 355 IRTLRGHESTIRCLQFDDTKL---ISGSLDRTIKVWNWRSGECISTYTGHQGGV--LCLH 409
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QC 284
D + S DNTIK W+ +S I+ H SV + + +F+ D
Sbjct: 410 FDSTTLASGSKDNTIKIWNFH-DKSTRILRGHADWVNSVKLDTASR---TVFSASDDLTV 465
Query: 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPID---KHILASCASDRSIILYDTRATVLSRNP 341
++W+ + + I +++ +V + V P + KH ++CA DRS L S +P
Sbjct: 466 RIWDLDTGKCIHSYAGHVGQVQQVLPLPREFEFKH-QSNCADDRSDRLSG------SESP 518
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEG--PREYVRALNATKLERVFAKPFVGPREYV--R 397
D H N P P P E + L +P P Y+
Sbjct: 519 DHR------GSHGYRSNNAPDQQPNTSAPPTEPMSPLFEALFTEDQGRP--APPRYMLTA 570
Query: 398 ALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456
AL+ T +L V + GH +G+ LA + +SGA D KVW+ + +C
Sbjct: 571 ALDLTLRLWEVHTGRCLRTFFGHIEGVWGLAADTLRF---VSGAQDHMAKVWDPRTGTCE 627
Query: 457 QTYQAHDGHV 466
+T+ H G V
Sbjct: 628 RTFTGHRGPV 637
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W++ + ++T + H+ +R
Sbjct: 320 GHTNGVMCLQFDDNILAT---GSYDATIKIWDIETGKEIRTLRGHESTIR 366
>sp|Q3V0C5|UBP48_MOUSE Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus GN=Usp48
PE=1 SV=2
Length = 1052
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
S R ++ + ++ G D QQ D QE ++ LE K D +++
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNVVQQQ 212
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
+ G+ C +CG E F ++ L ++ + + + + F++ E L+G N
Sbjct: 213 FCGEYAYVTVCNQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDN 266
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
+YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 267 RYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 2 TCYLNSLIQALFMTPEFRNAVY-------KWKYENDI-----AEETSITYQLQKLFVNLQ 49
TCY+N+ +Q F+ E R A+Y + + I E +I LQ LF LQ
Sbjct: 97 TCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIHGGKDYEPQTICEHLQYLFALLQ 156
Query: 50 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKT 98
S R ++ + ++ G D QQ D QE ++ LE K
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKN 202
>sp|Q0CY32|SCONB_ASPTN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=sconB PE=3 SV=1
Length = 673
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 48/308 (15%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L GH+ GI CL TKL ISG+ D +KVWN + C+ TY H G V + F D
Sbjct: 379 TLYGHESGIRCLQFDDTKL---ISGSMDRSLKVWNWRTGECISTYTGHRGGVIGLHF--D 433
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC--Q 285
+ S +D T+K W+ E +S ++ HT ++++ S+ + D C +
Sbjct: 434 ATILASASVDKTVKIWNFE-DKSTCLLRGHT----DWVNAVRVDTTSRTVFSASDDCTVR 488
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNP----IDKHILASCASDRSIILYDTRATVLSRNP 341
LW+ + + IR F +V + V P ++H A C +D + +S +P
Sbjct: 489 LWDLDTKQCIRTFHGHVGQVQQVIPLPREFEFEEHD-AECEND--------NVSTVSDDP 539
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RAL 399
+T + +I+P A ++ F P Y+ AL
Sbjct: 540 GSPAPQTTFGVS----SIEP-------------ASQSSMFGPSFDNGRPAPPRYIVTSAL 582
Query: 400 NAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT 458
++T +L + GH +G+ L + I+SGA D VK+W+ + C +T
Sbjct: 583 DSTIRLWETTTGRCLRTFFGHLEGVWALGADTLR---IVSGAEDRMVKIWDPRTGKCERT 639
Query: 459 YQAHDGHV 466
+ H G V
Sbjct: 640 FTGHSGPV 647
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAV 475
L GH D ++ + + T T+ S + D V++W+L ++ C++T+ H G V+
Sbjct: 459 LRGHTDWVNAV-RVDTTSRTVFSASDDCTVRLWDLDTKQCIRTFHGHVGQVQ-------- 509
Query: 476 ETTDLTRSFGWESSDAWQQHD 496
+ L R F +E DA ++D
Sbjct: 510 QVIPLPREFEFEEHDAECEND 530
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH +G+ L + I+SGA D VK+W+ + C +T+ H G V C S+
Sbjct: 602 GHLEGVWALGADTLR---IVSGAEDRMVKIWDPRTGKCERTFTGHSGPV--TCIGLGDSR 656
Query: 231 FLSVGIDNTIKTWS 244
F + D ++ +S
Sbjct: 657 FATGSEDCEVRMYS 670
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W+ + ++T H+ +R
Sbjct: 342 GHTNGVMCLQFEDNILAT---GSYDATIKIWDTETGEELRTLYGHESGIR 388
>sp|Q5ZM45|UBP48_CHICK Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus GN=USP48
PE=2 SV=1
Length = 1033
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
S R ++ + ++ G D QQ D QE ++ LE K D +++
Sbjct: 155 NSKRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQKQ 210
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
+ G+ C +CG E F ++ L ++ + + + + F++ E L+G N
Sbjct: 211 FCGEYAYVTVCNQCGRESKLVSKFYELELNIQ------GHKQLTDCITEFLKEEKLEGDN 264
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
+YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 265 RYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 310
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET----------SITYQLQKLFVNLQTS 51
TCY+N+ +Q F+ E R A+Y A E+ +I LQ LF LQ S
Sbjct: 97 TCYVNTFLQMWFLNLELRQALYLCSSNEHAAGESIPKDKDYEPQTICEHLQYLFALLQNS 156
Query: 52 TRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKT 98
R ++ + ++ G D QQ D QE ++ LE K
Sbjct: 157 KRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKN 200
>sp|B8M7Q5|SCONB_TALSN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=sconB PE=3 SV=1
Length = 667
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 129/303 (42%), Gaps = 51/303 (16%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH GI CL TKL ISG+ D +KVWN + C+ TY H G + + F +
Sbjct: 385 LTGHTSGIRCLQFDDTKL---ISGSIDRTLKVWNWRTGECISTYTGHLGGIIGLHF--EN 439
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC--QL 286
S S IDNT+K W+ E +S ++ H+ ++++ S+ + D C +L
Sbjct: 440 SVLASGSIDNTVKIWNFE-DKSTFLLRGHS----DWVNAVRVDSASRTVLSASDDCTVKL 494
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346
W+ + + IR F +V + Q P+ K D D+ A+V + LR
Sbjct: 495 WDLDSKQCIRTFQGHVGQVQ--QVIPLPKEFEFEEDHDAG-HEEDSNASV--SGDESPLR 549
Query: 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RALNAT-K 403
+ S P FEG R P Y+ AL++T +
Sbjct: 550 QEPCS---------PGASFFEGDRP-------------------APPRYILTSALDSTIR 581
Query: 404 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
L ++ + GH +G+ L+ + I+SGA D VK+W+ + C +T+ H
Sbjct: 582 LWETYSGRCLRTFFGHLEGVWALSADTLR---IVSGAEDRMVKIWDPRTGKCERTFTGHS 638
Query: 464 GHV 466
G V
Sbjct: 639 GPV 641
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
L GH D ++ + + + T++S + D VK+W+L S+ C++T+Q H G V+ P
Sbjct: 464 LRGHSDWVNAV-RVDSASRTVLSASDDCTVKLWDLDSKQCIRTFQGHVGQVQQVIPLP 520
Score = 39.7 bits (91), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 137 PSLHPFEG----PREYV--RALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI 189
P FEG P Y+ AL++T +L ++ + GH +G+ L+ + I
Sbjct: 555 PGASFFEGDRPAPPRYILTSALDSTIRLWETYSGRCLRTFFGHLEGVWALSADTLR---I 611
Query: 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR-----DVCFL 225
+SGA D VK+W+ + C +T+ H G V D CF+
Sbjct: 612 VSGAEDRMVKIWDPRTGKCERTFTGHSGPVTCVGLGDSCFV 652
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 408 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
+ + V GH +G+ CL L+T G+YD +K+W++ + ++T H +R
Sbjct: 337 YGRCSVKVFKGHTNGVMCLQFEDNILAT---GSYDMTIKIWDMETGEELRTLTGHTSGIR 393
>sp|Q76LT8|UBP48_RAT Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus
GN=Usp48 PE=1 SV=1
Length = 1036
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
S R ++ + ++ G D QQ D QE ++ LE K D +++
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQESSKLFMSLLEDTLSKQKNP-DVRNVVQQQ 212
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
+ G+ C +CG E F ++ L ++ + + + + F++ E L+G N
Sbjct: 213 FCGEYAYVTVCSQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDN 266
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
+YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 267 RYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 2 TCYLNSLIQALFMTPEFRNAVY-------KWKYENDIA-----EETSITYQLQKLFVNLQ 49
+CY+N+ +Q F+ E R A+Y + + I E +I LQ LF LQ
Sbjct: 97 SCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIRGGKDYEPQTICEHLQYLFALLQ 156
Query: 50 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKT 98
S R ++ + ++ G D QQ D QE ++ LE K
Sbjct: 157 NSNRRYIDPSGFVKALGL---DTGQQQDAQESSKLFMSLLEDTLSKQKN 202
>sp|Q01277|SCONB_NEUCR Probable E3 ubiquitin ligase complex SCF subunit scon-2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=scon-2 PE=1 SV=1
Length = 650
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 144/345 (41%), Gaps = 60/345 (17%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH++G++CL L+T G+YD +K+WN+ ++ C++T H +R + F D
Sbjct: 290 LKGHENGVTCLQLDDNILAT---GSYDTTIKIWNIETEECIRTLVGHTAGIRALQF--DD 344
Query: 229 SQFLSVGIDNTIKTWSSELSE--------SDHIVPLHTIISKSVISSISHQRKSKIF--- 277
S+ +S +D+TIK W+ E +D ++ +H +++S S + KIF
Sbjct: 345 SKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVH--FDGHLLASGSSDKTVKIFDFN 402
Query: 278 ----------------------------ATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQ 309
A+ +LW+ + + IR + +V + V
Sbjct: 403 SKETYCLKGHSDWVNSTHVDIKSRTVFSASDDTTIKLWDLDTRQVIRTYEGHVGHVQQVL 462
Query: 310 FNPI----DKHILASCASDR--SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSL 363
P D+ +L + D ++ + + S + + R H N+ PS
Sbjct: 463 ILPPEYEPDEEVLNGASQDNQDAMSVSSGGSGSPSMSHAQIERAGSPGSHSSSHNLLPSS 522
Query: 364 HPFEGPREYVRALNATKLERVFAKPFVGPREYVRA-LNAT-KLERVFAKPFVANLDGHKD 421
P E VR L + ++P PR ++ L++T +L + L GH +
Sbjct: 523 LP--SGDEDVRHLYGSAFVADESRPLP-PRYFMTGGLDSTMRLWDSATGRCLRTLFGHLE 579
Query: 422 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
G+ LA + +ISGA DG VK W S C TY H G V
Sbjct: 580 GVWSLAGDTIR---VISGANDGMVKTWEPRSGKCDATYTGHCGPV 621
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
L GH++G++CL L+T G+YD +K+WN+ ++ C++T H +R
Sbjct: 290 LKGHENGVTCLQLDDNILAT---GSYDTTIKIWNIETEECIRTLVGHTAGIR 338
Score = 39.7 bits (91), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH +G+ LA + +ISGA DG VK W S C TY H G V C
Sbjct: 574 LFGHLEGVWSLAGDTIR---VISGANDGMVKTWEPRSGKCDATYTGHCGPV--TCVGLSD 628
Query: 229 SQFLSVGIDNTIK 241
S S D TI+
Sbjct: 629 SLMASGSEDGTIR 641
Score = 36.6 bits (83), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 416 LDGHKDGISCLAKH-PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
L GH D ++ + H K T+ S + D +K+W+L ++ ++TY+ H GHV+ P
Sbjct: 409 LKGHSDWVN--STHVDIKSRTVFSASDDTTIKLWDLDTRQVIRTYEGHVGHVQQVLILP 465
>sp|Q2UFN8|SCONB_ASPOR Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sconB PE=3 SV=1
Length = 705
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 125/307 (40%), Gaps = 50/307 (16%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ GI CL TKL ISG+ D +KVWN + C+ TY H G V + F D
Sbjct: 414 LRGHQSGIRCLQFDDTKL---ISGSMDRSLKVWNWRTGECISTYTGHRGGVIGLHF--DA 468
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC--QL 286
+ S +D T+K W+ E +S ++ HT ++++ S+ + D C +L
Sbjct: 469 TILASASVDKTVKIWNFE-DKSTFLLRGHT----DWVNAVRVDTTSRTVFSASDDCTVRL 523
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHIL---ASCASDR-SIILYDTRATVLSRNPD 342
W+ + +R F +V + V P + A C +D S DT + L
Sbjct: 524 WDLDTKACLRTFHGHVGQVQQVVPLPREFEFEDHDAECDNDNMSTTSGDTESNSLQATLG 583
Query: 343 EYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RALN 400
T+TS+ GP F P Y+ AL+
Sbjct: 584 LESNATETSVF--------------GPS--------------FDNGRPAPPRYIVTSALD 615
Query: 401 AT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
+T +L + GH +G+ L + I+SGA D VK+W+ + C +T+
Sbjct: 616 STIRLWETTTGRCLRTFFGHLEGVWALGADTLR---IVSGAEDRMVKIWDPRTGKCERTF 672
Query: 460 QAHDGHV 466
H G V
Sbjct: 673 TGHSGPV 679
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAV 475
L GH D ++ + + T T+ S + D V++W+L +++C++T+ H G V+
Sbjct: 493 LRGHTDWVNAV-RVDTTSRTVFSASDDCTVRLWDLDTKACLRTFHGHVGQVQ-------- 543
Query: 476 ETTDLTRSFGWESSDA 491
+ L R F +E DA
Sbjct: 544 QVVPLPREFEFEDHDA 559
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH +G+ L + I+SGA D VK+W+ + C +T+ H G V C S+
Sbjct: 634 GHLEGVWALGADTLR---IVSGAEDRMVKIWDPRTGKCERTFTGHSGPV--TCIGLGDSR 688
Query: 231 FLSVGIDNTIKTWS 244
F + D ++ +S
Sbjct: 689 FATGSEDCEVRMYS 702
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH +G+ CL L+T G+YD +K+W+ + ++T + H +R
Sbjct: 376 GHTNGVMCLQFEDNILAT---GSYDATIKIWDTETGEELRTLRGHQSGIR 422
>sp|Q00659|SCONB_EMENI Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=sconB PE=3 SV=2
Length = 678
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 124/307 (40%), Gaps = 48/307 (15%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ GI CL TKL ISG+ D +KVWN + C+ TY H G V + F D
Sbjct: 385 LRGHESGIRCLQFDDTKL---ISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DA 439
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQC--QL 286
S S +D T+K W+ E +S + HT ++++ S+ + D C +L
Sbjct: 440 SILASGSVDKTVKIWNFE-DKSTFSLRGHT----DWVNAVRVDTSSRTVFSASDDCTVRL 494
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNP----IDKHILASCASDRSIILYDTRATVLSRNPD 342
W+ + IR F +V + V P ++H A C +D D T +P
Sbjct: 495 WDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHD-AECEND------DLSTTSGDADP- 546
Query: 343 EYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYV--RALN 400
PS+ G ++ F P Y+ AL+
Sbjct: 547 ------------------PSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALD 588
Query: 401 AT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
+T +L + GH +G+ L + I+SGA D +K+W+ + C +T+
Sbjct: 589 STIRLWETTTGRCLRTFFGHLEGVWALGADTLR---IVSGAEDRMIKIWDPRTGKCERTF 645
Query: 460 QAHDGHV 466
H G V
Sbjct: 646 TGHSGPV 652
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
+L GH D ++ + + T T+ S + D V++W+L +++C++T+ H G V+ V LP
Sbjct: 463 SLRGHTDWVNAV-RVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPR 521
Query: 228 GSQF 231
+F
Sbjct: 522 EFEF 525
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
+L GH D ++ + + T T+ S + D V++W+L +++C++T+ H G V+
Sbjct: 463 SLRGHTDWVNAV-RVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQ------- 514
Query: 475 VETTDLTRSFGWESSDAWQQHD 496
+ L R F +E DA ++D
Sbjct: 515 -QVVPLPREFEFEEHDAECEND 535
Score = 36.2 bits (82), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH +G+ L + I+SGA D +K+W+ + C +T+ H G V C S+
Sbjct: 607 GHLEGVWALGADTLR---IVSGAEDRMIKIWDPRTGKCERTFTGHSGPV--TCIGLGDSR 661
Query: 231 FLSVGIDNTIKTWS 244
F + D ++ +S
Sbjct: 662 FATGSEDCEVRMYS 675
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 408 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
+ + + GH +G+ CL L+T G+YD +K+W+ + ++T + H+ +R
Sbjct: 337 YGRCSIKTFKGHTNGVMCLQFEDNILAT---GSYDTTIKIWDTETGEELRTLRGHESGIR 393
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,062,386
Number of Sequences: 539616
Number of extensions: 10081350
Number of successful extensions: 36695
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 614
Number of HSP's that attempted gapping in prelim test: 26920
Number of HSP's gapped (non-prelim): 8395
length of query: 639
length of database: 191,569,459
effective HSP length: 124
effective length of query: 515
effective length of database: 124,657,075
effective search space: 64198393625
effective search space used: 64198393625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)