Query psy18073
Match_columns 639
No_of_seqs 833 out of 4999
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 21:57:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18073.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18073hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.4E-40 4.9E-45 342.8 25.1 283 121-493 104-408 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 9.7E-40 3.3E-44 322.5 29.6 275 165-478 5-285 (304)
3 3ow8_A WD repeat-containing pr 100.0 2.8E-39 9.5E-44 321.3 26.2 281 122-493 29-318 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 1.2E-37 4.1E-42 312.7 32.5 286 165-492 47-339 (340)
5 4gqb_B Methylosome protein 50; 100.0 4.5E-38 1.5E-42 314.9 26.8 301 155-495 16-330 (344)
6 1vyh_C Platelet-activating fac 100.0 1.4E-37 4.7E-42 320.5 27.7 245 165-494 100-367 (410)
7 4g56_B MGC81050 protein; prote 100.0 4.4E-37 1.5E-41 310.4 28.3 301 155-495 28-342 (357)
8 2pbi_B Guanine nucleotide-bind 100.0 2.5E-36 8.7E-41 304.5 32.6 287 165-492 56-353 (354)
9 1erj_A Transcriptional repress 100.0 7.4E-37 2.5E-41 313.4 26.8 291 123-494 62-387 (393)
10 3ow8_A WD repeat-containing pr 100.0 1.4E-36 4.8E-41 301.8 27.9 248 163-494 22-277 (321)
11 4gqb_B Methylosome protein 50; 100.0 7.9E-37 2.7E-41 305.9 26.2 224 153-455 103-334 (344)
12 4ery_A WD repeat-containing pr 100.0 5.2E-36 1.8E-40 297.3 31.5 288 165-494 15-310 (312)
13 1nr0_A Actin interacting prote 100.0 4.2E-36 1.4E-40 325.9 30.5 335 154-496 130-567 (611)
14 3frx_A Guanine nucleotide-bind 100.0 4.3E-36 1.5E-40 298.4 27.5 237 164-482 8-256 (319)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-36 6.7E-41 304.5 24.7 304 123-499 13-338 (345)
16 3frx_A Guanine nucleotide-bind 100.0 3.5E-36 1.2E-40 299.0 25.0 292 121-453 13-318 (319)
17 3iz6_a 40S ribosomal protein R 100.0 3.9E-36 1.3E-40 306.6 25.5 295 158-493 51-372 (380)
18 2pm7_B Protein transport prote 100.0 2.2E-35 7.5E-40 290.2 28.0 250 167-494 3-283 (297)
19 1got_B GT-beta; complex (GTP-b 100.0 1.8E-35 6.3E-40 296.8 25.2 281 120-449 50-340 (340)
20 2hes_X YDR267CP; beta-propelle 100.0 3E-35 1E-39 293.9 25.6 269 153-495 34-327 (330)
21 1nr0_A Actin interacting prote 100.0 5.6E-35 1.9E-39 317.1 27.9 262 153-494 39-353 (611)
22 2xzm_R RACK1; ribosome, transl 100.0 3.1E-35 1.1E-39 295.6 24.0 282 121-493 17-337 (343)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-35 1.5E-39 294.6 24.7 250 164-494 6-281 (345)
24 4g56_B MGC81050 protein; prote 100.0 1.3E-34 4.6E-39 292.2 24.7 221 153-453 115-344 (357)
25 2hes_X YDR267CP; beta-propelle 100.0 3.1E-34 1.1E-38 286.5 27.0 250 163-494 4-278 (330)
26 2xzm_R RACK1; ribosome, transl 100.0 8.1E-34 2.8E-38 285.3 28.9 242 164-493 12-282 (343)
27 2pbi_B Guanine nucleotide-bind 100.0 3.5E-34 1.2E-38 288.9 25.6 283 119-449 58-354 (354)
28 3bg1_A Protein SEC13 homolog; 100.0 9.5E-35 3.3E-39 288.3 19.8 248 167-493 7-290 (316)
29 2ymu_A WD-40 repeat protein; u 100.0 8.7E-34 3E-38 306.6 28.9 288 153-492 284-576 (577)
30 3iz6_a 40S ribosomal protein R 100.0 8.2E-35 2.8E-39 296.8 16.7 297 120-454 61-377 (380)
31 4ery_A WD repeat-containing pr 100.0 3.2E-33 1.1E-37 277.1 27.1 287 121-451 19-311 (312)
32 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-34 2.3E-38 299.0 21.5 179 153-338 183-390 (524)
33 2ymu_A WD-40 repeat protein; u 100.0 3.7E-33 1.3E-37 301.7 27.8 289 153-493 243-536 (577)
34 3mmy_A MRNA export factor; mRN 100.0 7.9E-33 2.7E-37 280.8 27.6 291 158-489 24-341 (368)
35 2pm7_B Protein transport prote 100.0 3.5E-33 1.2E-37 274.4 23.9 250 122-451 6-284 (297)
36 3dwl_C Actin-related protein 2 100.0 2.5E-34 8.5E-39 293.4 16.0 261 169-494 7-279 (377)
37 1gxr_A ESG1, transducin-like e 100.0 7.8E-33 2.7E-37 277.3 25.5 273 168-482 46-325 (337)
38 4e54_B DNA damage-binding prot 100.0 6.6E-33 2.3E-37 288.2 25.6 242 164-481 110-362 (435)
39 3jrp_A Fusion protein of prote 100.0 4.4E-33 1.5E-37 284.0 23.6 253 164-494 2-285 (379)
40 3ei3_B DNA damage-binding prot 100.0 4E-32 1.4E-36 277.6 29.7 298 151-495 51-381 (383)
41 1erj_A Transcriptional repress 100.0 1.7E-32 5.8E-37 281.0 27.0 244 171-493 62-338 (393)
42 3dm0_A Maltose-binding peripla 100.0 3.7E-33 1.2E-37 308.0 23.3 284 120-493 377-690 (694)
43 1r5m_A SIR4-interacting protei 100.0 6.8E-33 2.3E-37 287.2 23.0 313 126-482 46-413 (425)
44 2ynn_A Coatomer subunit beta'; 100.0 1.4E-32 4.6E-37 271.2 24.0 284 121-452 9-302 (304)
45 2pm9_A Protein WEB1, protein t 100.0 1.4E-32 4.7E-37 284.3 25.1 260 154-494 46-335 (416)
46 3zwl_B Eukaryotic translation 100.0 1.7E-32 5.9E-37 278.4 24.9 287 121-496 28-346 (369)
47 4gga_A P55CDC, cell division c 100.0 5.4E-32 1.9E-36 280.0 29.0 283 152-474 124-417 (420)
48 3bg1_A Protein SEC13 homolog; 100.0 1.8E-33 6.1E-38 279.1 16.9 251 121-451 9-292 (316)
49 4a11_B DNA excision repair pro 100.0 7.9E-32 2.7E-36 277.6 29.5 282 147-498 17-367 (408)
50 3dm0_A Maltose-binding peripla 100.0 3.7E-32 1.3E-36 299.9 27.7 245 166-494 375-630 (694)
51 2pm9_A Protein WEB1, protein t 100.0 4.5E-33 1.5E-37 288.0 19.0 283 124-494 66-412 (416)
52 3vl1_A 26S proteasome regulato 100.0 2.7E-32 9.2E-37 282.6 24.8 246 153-476 119-398 (420)
53 1sq9_A Antiviral protein SKI8; 100.0 9.5E-33 3.3E-37 283.7 21.1 283 121-476 12-367 (397)
54 4aow_A Guanine nucleotide-bind 100.0 9.8E-32 3.4E-36 269.8 27.9 236 163-479 28-272 (340)
55 3dwl_C Actin-related protein 2 100.0 4.2E-33 1.4E-37 284.2 17.4 243 125-451 11-280 (377)
56 3i2n_A WD repeat-containing pr 100.0 6.3E-32 2.2E-36 273.1 25.4 291 167-496 12-353 (357)
57 3zwl_B Eukaryotic translation 100.0 1.9E-31 6.4E-36 270.8 28.8 234 166-483 25-279 (369)
58 1k8k_C P40, ARP2/3 complex 41 100.0 9.3E-33 3.2E-37 281.0 19.1 285 124-496 7-361 (372)
59 3k26_A Polycomb protein EED; W 100.0 1.4E-32 4.8E-37 278.8 20.4 292 123-493 16-363 (366)
60 4aez_A CDC20, WD repeat-contai 100.0 1.3E-31 4.4E-36 275.5 27.7 262 153-500 113-384 (401)
61 3gre_A Serine/threonine-protei 100.0 5.4E-32 1.8E-36 281.9 25.1 301 157-474 47-418 (437)
62 2aq5_A Coronin-1A; WD40 repeat 100.0 6.8E-32 2.3E-36 277.8 25.3 246 153-479 57-329 (402)
63 3mkq_A Coatomer beta'-subunit; 100.0 6.2E-32 2.1E-36 304.5 26.9 278 165-478 5-285 (814)
64 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-31 4.3E-36 269.6 26.2 252 167-495 5-336 (351)
65 3f3f_A Nucleoporin SEH1; struc 100.0 1.3E-31 4.4E-36 269.5 24.8 304 119-460 5-345 (351)
66 1k8k_C P40, ARP2/3 complex 41 100.0 8.4E-32 2.9E-36 273.9 23.6 263 169-496 4-274 (372)
67 3odt_A Protein DOA1; ubiquitin 100.0 6.5E-31 2.2E-35 260.4 28.7 285 163-495 8-295 (313)
68 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-32 1.5E-36 285.1 20.5 261 153-451 235-516 (524)
69 3vl1_A 26S proteasome regulato 100.0 2.3E-31 7.9E-36 275.6 24.1 258 153-496 78-365 (420)
70 4aow_A Guanine nucleotide-bind 100.0 3.2E-31 1.1E-35 266.0 24.3 283 120-494 33-335 (340)
71 3dw8_B Serine/threonine-protei 100.0 8.5E-32 2.9E-36 281.2 20.0 288 124-483 27-436 (447)
72 4h5i_A Guanine nucleotide-exch 100.0 5.2E-32 1.8E-36 273.9 17.5 285 174-494 15-341 (365)
73 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-30 4.1E-35 307.5 31.5 294 166-493 608-910 (1249)
74 2oaj_A Protein SNI1; WD40 repe 100.0 6.7E-32 2.3E-36 303.5 19.3 203 123-338 15-246 (902)
75 2j04_A TAU60, YPL007P, hypothe 100.0 3E-31 1E-35 271.1 22.2 255 143-484 49-351 (588)
76 3v7d_B Cell division control p 100.0 1.1E-30 3.8E-35 274.2 27.2 256 153-495 142-420 (464)
77 4e54_B DNA damage-binding prot 100.0 1.7E-31 5.7E-36 277.6 20.4 301 124-497 118-431 (435)
78 1yfq_A Cell cycle arrest prote 100.0 3.6E-31 1.2E-35 266.0 21.9 277 167-486 5-315 (342)
79 2xyi_A Probable histone-bindin 100.0 6.6E-31 2.2E-35 272.6 23.7 252 167-494 122-408 (430)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-30 6.5E-35 270.8 27.0 281 153-485 139-429 (445)
81 1sq9_A Antiviral protein SKI8; 100.0 5.7E-31 2E-35 270.4 22.4 246 165-494 8-320 (397)
82 3jro_A Fusion protein of prote 100.0 3.4E-31 1.2E-35 293.8 21.9 242 166-482 2-273 (753)
83 3dw8_B Serine/threonine-protei 100.0 1.1E-30 3.9E-35 272.7 23.1 260 171-496 26-373 (447)
84 3jrp_A Fusion protein of prote 100.0 1.5E-30 5.1E-35 265.2 23.4 257 120-457 6-292 (379)
85 4h5i_A Guanine nucleotide-exch 100.0 2.9E-30 9.9E-35 261.1 23.8 201 171-452 131-343 (365)
86 3sfz_A APAF-1, apoptotic pepti 100.0 2.7E-30 9.3E-35 304.4 26.6 346 123-494 613-1032(1249)
87 3ei3_B DNA damage-binding prot 100.0 6.7E-30 2.3E-34 261.1 25.8 293 122-452 70-382 (383)
88 1r5m_A SIR4-interacting protei 100.0 4.7E-30 1.6E-34 265.8 24.8 290 156-494 28-359 (425)
89 4ggc_A P55CDC, cell division c 100.0 1.7E-29 5.8E-34 250.9 27.7 256 153-495 45-314 (318)
90 3i2n_A WD repeat-containing pr 100.0 1.6E-30 5.6E-35 262.7 19.6 308 123-455 16-356 (357)
91 3k26_A Polycomb protein EED; W 100.0 7.4E-30 2.5E-34 258.7 24.4 270 168-495 13-317 (366)
92 1p22_A F-BOX/WD-repeat protein 100.0 8.2E-30 2.8E-34 265.0 25.3 250 153-496 153-414 (435)
93 4gq1_A NUP37; propeller, trans 100.0 1E-30 3.5E-35 267.5 17.3 255 170-485 86-381 (393)
94 1pgu_A Actin interacting prote 100.0 1.5E-30 5E-35 283.6 17.4 328 153-493 183-611 (615)
95 4a11_B DNA excision repair pro 100.0 5E-29 1.7E-33 256.6 27.9 301 120-461 38-374 (408)
96 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-29 3.6E-34 285.7 24.0 238 169-473 13-281 (902)
97 3mkq_A Coatomer beta'-subunit; 100.0 5E-30 1.7E-34 288.9 21.4 340 123-482 53-487 (814)
98 2w18_A PALB2, fancn, partner a 100.0 1.7E-29 5.7E-34 242.4 21.5 216 154-450 64-355 (356)
99 3v7d_B Cell division control p 100.0 4.2E-29 1.4E-33 262.2 25.4 239 164-495 112-380 (464)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4E-29 1.4E-33 261.0 25.0 252 169-475 98-366 (450)
101 4gga_A P55CDC, cell division c 100.0 1.9E-28 6.5E-33 253.4 29.2 279 175-494 107-393 (420)
102 1pgu_A Actin interacting prote 100.0 3.2E-29 1.1E-33 272.9 24.4 300 124-474 17-349 (615)
103 4aez_A CDC20, WD repeat-contai 100.0 7E-29 2.4E-33 255.0 24.8 239 169-493 87-333 (401)
104 1gxr_A ESG1, transducin-like e 100.0 1.7E-28 5.9E-33 245.6 26.5 274 123-450 49-335 (337)
105 3jro_A Fusion protein of prote 100.0 5.5E-29 1.9E-33 276.1 24.3 255 120-454 4-287 (753)
106 2j04_A TAU60, YPL007P, hypothe 100.0 7.3E-30 2.5E-34 260.9 15.1 253 123-482 13-286 (588)
107 3vu4_A KMHSV2; beta-propeller 100.0 8.6E-29 2.9E-33 249.5 22.7 260 157-496 3-271 (355)
108 3lrv_A PRE-mRNA-splicing facto 100.0 8.3E-29 2.8E-33 248.7 21.0 233 153-473 58-309 (343)
109 2xyi_A Probable histone-bindin 100.0 3.3E-28 1.1E-32 252.3 25.4 237 154-453 152-411 (430)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-28 9.2E-33 250.9 24.1 244 175-496 36-299 (402)
111 3gre_A Serine/threonine-protei 100.0 9.5E-29 3.2E-33 257.3 20.8 209 122-342 60-300 (437)
112 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.8E-28 1.3E-32 253.6 25.4 240 173-494 4-337 (450)
113 4gq1_A NUP37; propeller, trans 100.0 2E-28 6.9E-33 250.5 18.7 220 153-450 111-387 (393)
114 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-28 5.2E-33 246.8 16.9 234 176-493 39-289 (343)
115 3odt_A Protein DOA1; ubiquitin 100.0 7.2E-28 2.5E-32 238.4 21.3 283 121-459 14-303 (313)
116 3mmy_A MRNA export factor; mRN 100.0 9.5E-28 3.3E-32 243.3 20.7 251 120-455 34-349 (368)
117 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-27 1.4E-31 244.6 25.7 228 169-493 129-362 (435)
118 3vu4_A KMHSV2; beta-propeller 100.0 4.5E-27 1.5E-31 236.9 24.4 263 122-483 16-325 (355)
119 4ggc_A P55CDC, cell division c 100.0 7.9E-27 2.7E-31 231.6 25.6 244 124-454 66-317 (318)
120 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-27 2.2E-31 244.0 25.9 244 153-494 98-346 (445)
121 1l0q_A Surface layer protein; 99.9 7E-26 2.4E-30 231.9 27.9 255 153-495 12-274 (391)
122 3bws_A Protein LP49; two-domai 99.9 4.1E-26 1.4E-30 237.1 25.2 243 154-481 145-418 (433)
123 2y6e_A Ubiquitin carboxyl-term 99.9 2.5E-27 8.5E-32 238.7 15.0 148 490-639 94-279 (367)
124 1vjv_A Ubiquitin carboxyl-term 99.9 2E-27 6.9E-32 243.4 14.6 106 523-639 144-251 (415)
125 2gfo_A Ubiquitin carboxyl-term 99.9 8.1E-27 2.8E-31 236.1 15.2 144 490-639 148-316 (396)
126 2w18_A PALB2, fancn, partner a 99.9 1.3E-25 4.4E-30 215.6 22.3 237 175-493 41-354 (356)
127 1nb8_A Ubiquitin carboxyl-term 99.9 4.1E-26 1.4E-30 227.6 15.0 146 483-639 75-220 (353)
128 1yfq_A Cell cycle arrest prote 99.9 9.8E-26 3.3E-30 226.2 17.4 240 123-450 9-322 (342)
129 1l0q_A Surface layer protein; 99.9 5.7E-24 2E-28 217.7 29.6 239 153-478 54-304 (391)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-24 5.9E-29 222.6 24.9 234 153-475 159-409 (415)
131 3i3t_A Ubiquitin carboxyl-term 99.9 8.1E-26 2.8E-30 227.7 12.4 148 490-639 87-274 (355)
132 3bws_A Protein LP49; two-domai 99.9 2E-24 6.8E-29 224.4 21.6 233 164-482 114-363 (433)
133 3nhe_A Ubiquitin carboxyl-term 99.9 3.3E-25 1.1E-29 222.5 14.2 146 490-639 94-264 (348)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.1E-24 7.3E-29 221.9 19.3 242 154-483 94-373 (415)
135 2f1z_A Ubiquitin carboxyl-term 99.9 5.2E-25 1.8E-29 231.3 14.2 147 482-639 243-389 (522)
136 2ojh_A Uncharacterized protein 99.9 1.3E-23 4.4E-28 205.7 21.4 247 153-483 22-291 (297)
137 1nir_A Nitrite reductase; hemo 99.9 1.6E-22 5.3E-27 214.4 25.7 302 153-482 159-497 (543)
138 1nir_A Nitrite reductase; hemo 99.9 1.7E-21 5.9E-26 206.4 26.7 263 180-483 144-440 (543)
139 3mhs_A Ubiquitin carboxyl-term 99.9 3.6E-23 1.2E-27 215.7 12.9 142 490-639 236-387 (476)
140 3ihp_A Ubiquitin carboxyl-term 99.9 3E-23 1E-27 226.5 12.0 139 490-639 448-612 (854)
141 2ayn_A Ubiquitin carboxyl-term 99.9 6.2E-23 2.1E-27 209.9 13.2 140 490-639 103-259 (404)
142 3u4y_A Uncharacterized protein 99.9 9.5E-21 3.2E-25 188.9 24.6 248 153-482 20-291 (331)
143 1xfd_A DIP, dipeptidyl aminope 99.9 3.2E-21 1.1E-25 214.0 20.4 319 129-483 20-429 (723)
144 2ecf_A Dipeptidyl peptidase IV 99.9 7.3E-21 2.5E-25 211.7 21.7 257 173-481 36-354 (741)
145 3vgz_A Uncharacterized protein 99.9 4E-20 1.4E-24 186.0 24.1 246 154-484 70-334 (353)
146 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-21 1E-25 214.1 16.9 259 175-481 18-323 (723)
147 2z3z_A Dipeptidyl aminopeptida 99.8 4.9E-20 1.7E-24 203.8 23.3 292 157-483 47-420 (706)
148 1ri6_A Putative isomerase YBHE 99.8 9.7E-20 3.3E-24 182.3 23.4 252 153-482 15-295 (343)
149 2ecf_A Dipeptidyl peptidase IV 99.8 1E-20 3.5E-25 210.5 17.6 266 128-483 111-444 (741)
150 1pby_B Quinohemoprotein amine 99.8 1.1E-19 3.8E-24 181.4 22.7 266 154-464 12-322 (337)
151 3hfq_A Uncharacterized protein 99.8 1.3E-19 4.4E-24 182.0 22.0 241 170-482 36-304 (347)
152 3o4h_A Acylamino-acid-releasin 99.8 1.7E-20 5.8E-25 202.4 15.0 215 173-477 21-259 (582)
153 2oit_A Nucleoporin 214KDA; NH2 99.8 2.2E-20 7.4E-25 192.6 14.8 200 196-480 23-257 (434)
154 1k32_A Tricorn protease; prote 99.8 3.9E-20 1.3E-24 213.0 17.4 316 123-483 50-440 (1045)
155 3u4y_A Uncharacterized protein 99.8 1.6E-18 5.6E-23 172.6 26.9 224 179-481 3-238 (331)
156 1z68_A Fibroblast activation p 99.8 4.7E-20 1.6E-24 204.3 17.1 253 178-481 20-329 (719)
157 1jmx_B Amine dehydrogenase; ox 99.8 8.2E-19 2.8E-23 176.1 23.0 146 153-301 21-185 (349)
158 1k32_A Tricorn protease; prote 99.8 1.2E-19 4.3E-24 208.8 18.0 240 154-483 225-491 (1045)
159 1pby_B Quinohemoprotein amine 99.8 1.6E-18 5.6E-23 172.9 23.8 267 187-481 2-297 (337)
160 2ojh_A Uncharacterized protein 99.8 8.9E-19 3E-23 171.1 20.3 211 190-483 16-236 (297)
161 2oit_A Nucleoporin 214KDA; NH2 99.8 2.4E-19 8.3E-24 184.7 16.9 158 173-333 36-222 (434)
162 3vgz_A Uncharacterized protein 99.8 2.2E-18 7.5E-23 173.3 23.2 234 172-481 39-289 (353)
163 1ri6_A Putative isomerase YBHE 99.8 2.3E-18 7.9E-23 172.3 19.4 177 153-333 60-261 (343)
164 3hfq_A Uncharacterized protein 99.8 9.2E-18 3.2E-22 168.4 22.1 230 153-457 63-324 (347)
165 3scy_A Hypothetical bacterial 99.8 4E-17 1.4E-21 164.8 25.7 235 172-482 48-324 (361)
166 4a5s_A Dipeptidyl peptidase 4 99.8 4.9E-18 1.7E-22 188.1 20.2 275 155-479 5-334 (740)
167 1jmx_B Amine dehydrogenase; ox 99.8 3.1E-17 1.1E-21 164.5 21.7 277 178-481 4-312 (349)
168 1z68_A Fibroblast activation p 99.8 1.9E-18 6.6E-23 191.4 13.3 253 153-483 36-375 (719)
169 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.6E-17 8.7E-22 166.3 19.5 241 172-482 38-328 (365)
170 3pe7_A Oligogalacturonate lyas 99.8 5.3E-17 1.8E-21 165.5 21.6 289 159-483 16-370 (388)
171 2z3z_A Dipeptidyl aminopeptida 99.7 2.8E-17 9.6E-22 181.6 19.3 179 153-335 141-392 (706)
172 3o4h_A Acylamino-acid-releasin 99.7 2.1E-17 7.2E-22 178.2 15.3 230 154-481 45-299 (582)
173 2oiz_A Aromatic amine dehydrog 99.7 2.7E-16 9.4E-21 157.9 20.6 241 154-477 32-361 (361)
174 3fvz_A Peptidyl-glycine alpha- 99.7 1.6E-15 5.5E-20 150.6 25.4 226 173-478 23-306 (329)
175 3e5z_A Putative gluconolactona 99.7 7.6E-16 2.6E-20 150.6 22.3 238 165-483 19-276 (296)
176 3scy_A Hypothetical bacterial 99.7 1.1E-15 3.7E-20 154.1 22.1 240 154-472 76-360 (361)
177 2dg1_A DRP35, lactonase; beta 99.7 1.5E-14 5.2E-19 143.9 26.8 248 162-484 33-300 (333)
178 2xdw_A Prolyl endopeptidase; a 99.7 3.2E-15 1.1E-19 164.9 22.8 234 171-483 122-399 (710)
179 3azo_A Aminopeptidase; POP fam 99.7 6.9E-16 2.4E-20 169.1 17.4 250 155-482 49-353 (662)
180 1q7f_A NHL, brain tumor CG1071 99.7 3.2E-14 1.1E-18 138.2 25.3 224 170-479 26-266 (286)
181 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.8E-15 6E-20 152.8 16.2 174 154-333 61-290 (365)
182 4a5s_A Dipeptidyl peptidase 4 99.6 1E-15 3.5E-20 169.6 14.5 180 153-336 36-296 (740)
183 3azo_A Aminopeptidase; POP fam 99.6 4.5E-15 1.6E-19 162.6 18.1 247 167-493 17-320 (662)
184 3c5m_A Oligogalacturonate lyas 99.6 2.7E-15 9.3E-20 153.2 14.5 236 159-480 16-299 (396)
185 3c5m_A Oligogalacturonate lyas 99.6 1.9E-15 6.6E-20 154.3 13.1 242 155-483 62-370 (396)
186 2gop_A Trilobed protease; beta 99.6 3.1E-14 1E-18 142.6 19.3 217 155-473 45-311 (347)
187 3fvz_A Peptidyl-glycine alpha- 99.6 3.4E-13 1.2E-17 133.7 24.5 223 153-452 69-322 (329)
188 2bkl_A Prolyl endopeptidase; m 99.6 3.8E-14 1.3E-18 155.8 19.2 233 170-483 117-382 (695)
189 1q7f_A NHL, brain tumor CG1071 99.6 5.8E-13 2E-17 129.2 24.4 169 154-333 52-237 (286)
190 3no2_A Uncharacterized protein 99.6 3E-13 1E-17 129.9 20.9 208 187-480 6-229 (276)
191 2oiz_A Aromatic amine dehydrog 99.5 1.2E-12 4.1E-17 131.3 24.6 275 194-494 29-332 (361)
192 3pe7_A Oligogalacturonate lyas 99.5 4.6E-13 1.6E-17 136.2 20.6 175 155-337 62-276 (388)
193 3dsm_A Uncharacterized protein 99.5 2.9E-12 1E-16 126.8 24.9 224 153-461 64-310 (328)
194 3g4e_A Regucalcin; six bladed 99.5 1.6E-12 5.5E-17 126.8 22.5 232 172-482 11-260 (297)
195 1rwi_B Serine/threonine-protei 99.5 1.2E-12 4E-17 125.9 20.8 220 175-477 25-247 (270)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.6E-12 8.9E-17 126.4 22.1 234 171-481 15-285 (314)
197 1yr2_A Prolyl oligopeptidase; 99.5 7.2E-13 2.5E-17 146.7 18.1 231 171-483 160-426 (741)
198 2xdw_A Prolyl endopeptidase; a 99.5 3.4E-12 1.2E-16 140.6 23.1 200 128-336 127-370 (710)
199 1rwi_B Serine/threonine-protei 99.5 4.4E-12 1.5E-16 121.8 20.6 201 172-456 65-268 (270)
200 2gop_A Trilobed protease; beta 99.4 2.4E-12 8.3E-17 128.7 18.1 133 174-324 15-190 (347)
201 1qks_A Cytochrome CD1 nitrite 99.4 2.8E-11 9.5E-16 127.7 26.6 254 153-481 177-457 (567)
202 2dg1_A DRP35, lactonase; beta 99.4 2.3E-12 8E-17 128.0 17.4 218 174-478 6-247 (333)
203 3dsm_A Uncharacterized protein 99.4 1.1E-11 3.7E-16 122.7 21.9 220 174-481 44-284 (328)
204 1qks_A Cytochrome CD1 nitrite 99.4 4.5E-11 1.5E-15 126.1 26.4 216 183-480 165-405 (567)
205 3e5z_A Putative gluconolactona 99.4 8.4E-12 2.9E-16 121.7 19.0 168 154-333 51-245 (296)
206 3no2_A Uncharacterized protein 99.4 8.5E-12 2.9E-16 119.7 18.4 178 153-338 15-199 (276)
207 3dr2_A Exported gluconolactona 99.4 2.4E-11 8.4E-16 118.9 21.6 237 163-483 34-296 (305)
208 2ghs_A AGR_C_1268P; regucalcin 99.4 4.6E-11 1.6E-15 118.0 22.2 230 175-482 50-290 (326)
209 2bkl_A Prolyl endopeptidase; m 99.4 2.2E-11 7.4E-16 133.8 21.6 194 128-333 123-348 (695)
210 2z2n_A Virginiamycin B lyase; 99.3 4.7E-10 1.6E-14 109.2 27.2 224 169-478 10-239 (299)
211 3iuj_A Prolyl endopeptidase; h 99.3 1.5E-11 5.1E-16 134.8 18.2 231 171-483 126-390 (693)
212 3hrp_A Uncharacterized protein 99.3 1.7E-10 5.8E-15 117.4 24.0 236 174-478 131-394 (409)
213 2z2n_A Virginiamycin B lyase; 99.3 4.3E-10 1.5E-14 109.5 25.1 219 172-479 55-281 (299)
214 1xip_A Nucleoporin NUP159; bet 99.3 1.9E-11 6.5E-16 121.4 15.0 144 175-336 39-193 (388)
215 1nb8_A Ubiquitin carboxyl-term 99.3 8.6E-12 2.9E-16 124.0 11.7 95 1-97 14-108 (353)
216 1xip_A Nucleoporin NUP159; bet 99.3 1.7E-11 5.8E-16 121.7 13.5 174 218-480 39-230 (388)
217 2y6e_A Ubiquitin carboxyl-term 99.3 6.6E-12 2.2E-16 126.0 9.6 96 1-96 16-119 (367)
218 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 6.9E-10 2.3E-14 108.9 22.6 196 171-452 68-299 (314)
219 2qe8_A Uncharacterized protein 99.2 1.5E-10 5E-15 115.3 16.7 237 174-480 17-307 (343)
220 2mad_H Methylamine dehydrogena 99.2 3E-09 1E-13 106.6 25.3 252 154-483 48-337 (373)
221 2f1z_A Ubiquitin carboxyl-term 99.2 3.7E-11 1.3E-15 126.1 11.2 107 1-109 183-289 (522)
222 3sjl_D Methylamine dehydrogena 99.2 1.9E-09 6.7E-14 106.4 22.5 152 179-337 38-212 (386)
223 2qc5_A Streptogramin B lactona 99.2 7.9E-09 2.7E-13 100.4 26.2 221 172-478 60-286 (300)
224 3nhe_A Ubiquitin carboxyl-term 99.2 4.7E-11 1.6E-15 119.2 9.6 96 1-96 17-119 (348)
225 2qc5_A Streptogramin B lactona 99.2 9.3E-09 3.2E-13 99.9 25.8 221 171-477 17-243 (300)
226 2hz6_A Endoplasmic reticulum t 99.2 1.7E-11 5.8E-16 123.2 5.7 141 187-338 10-153 (369)
227 2gfo_A Ubiquitin carboxyl-term 99.2 2.6E-11 8.9E-16 122.4 6.8 96 1-96 70-173 (396)
228 3i3t_A Ubiquitin carboxyl-term 99.1 4.4E-11 1.5E-15 119.8 7.7 96 1-96 11-112 (355)
229 2ayn_A Ubiquitin carboxyl-term 99.1 2.8E-11 9.7E-16 123.3 6.3 95 1-96 22-128 (404)
230 3g4e_A Regucalcin; six bladed 99.1 6.2E-09 2.1E-13 101.2 22.2 159 172-338 52-233 (297)
231 1yr2_A Prolyl oligopeptidase; 99.1 1.3E-09 4.6E-14 120.4 19.6 195 128-333 165-392 (741)
232 3c75_H MADH, methylamine dehyd 99.1 1.4E-08 4.9E-13 102.2 21.2 149 183-337 82-251 (426)
233 3hrp_A Uncharacterized protein 99.0 6.8E-09 2.3E-13 105.6 19.1 176 154-336 153-356 (409)
234 3c75_H MADH, methylamine dehyd 99.0 3.8E-09 1.3E-13 106.3 16.1 98 153-253 99-215 (426)
235 1mda_H Methylamine dehydrogena 99.0 1.5E-09 5.2E-14 107.5 12.8 90 155-247 48-158 (368)
236 2ece_A 462AA long hypothetical 99.0 6.7E-08 2.3E-12 96.0 23.4 152 180-334 88-289 (462)
237 3ihp_A Ubiquitin carboxyl-term 99.0 7.1E-10 2.4E-14 121.5 10.2 96 1-96 352-473 (854)
238 3iuj_A Prolyl endopeptidase; h 98.9 2.3E-08 7.8E-13 109.5 17.7 195 127-335 130-360 (693)
239 2ghs_A AGR_C_1268P; regucalcin 98.9 2.5E-07 8.7E-12 91.0 23.2 149 173-332 89-258 (326)
240 2vhf_A Ubiquitin carboxyl-term 98.9 8.1E-10 2.8E-14 104.9 4.3 89 1-92 17-114 (374)
241 2qe8_A Uncharacterized protein 98.9 1.9E-08 6.4E-13 100.0 14.0 163 171-335 64-279 (343)
242 2mad_H Methylamine dehydrogena 98.8 5.5E-07 1.9E-11 90.1 22.8 150 180-338 27-199 (373)
243 1mda_H Methylamine dehydrogena 98.8 5.8E-08 2E-12 96.1 15.3 139 187-334 33-194 (368)
244 3mhs_A Ubiquitin carboxyl-term 98.8 5.2E-09 1.8E-13 108.7 7.6 94 1-94 149-259 (476)
245 1npe_A Nidogen, entactin; glyc 98.8 2.4E-06 8.4E-11 81.2 25.4 218 174-475 36-262 (267)
246 1fwx_A Nitrous oxide reductase 98.8 2.8E-07 9.6E-12 95.0 19.1 233 183-487 99-411 (595)
247 2iwa_A Glutamine cyclotransfer 98.8 1.5E-06 5.1E-11 81.1 22.1 216 164-453 10-238 (266)
248 1yiq_A Quinohemoprotein alcoho 98.8 6.6E-08 2.3E-12 105.1 15.0 254 195-481 182-535 (689)
249 3nol_A Glutamine cyclotransfer 98.7 2.1E-06 7.3E-11 79.0 20.3 164 165-341 33-208 (262)
250 1kb0_A Quinohemoprotein alcoho 98.7 9.8E-08 3.4E-12 103.5 13.4 251 195-480 189-536 (677)
251 1fwx_A Nitrous oxide reductase 98.6 6.7E-07 2.3E-11 92.2 16.9 169 158-334 117-361 (595)
252 3hxj_A Pyrrolo-quinoline quino 98.6 1.8E-06 6.1E-11 85.0 19.0 202 187-478 108-309 (330)
253 3nok_A Glutaminyl cyclase; bet 98.6 2.3E-06 7.9E-11 78.7 16.8 153 175-341 56-217 (268)
254 3mbr_X Glutamine cyclotransfer 98.5 1.6E-05 5.6E-10 72.5 21.7 163 166-341 12-186 (243)
255 2hz6_A Endoplasmic reticulum t 98.5 3.9E-09 1.3E-13 105.9 -3.0 171 154-339 20-197 (369)
256 2p4o_A Hypothetical protein; p 98.5 1.4E-05 4.7E-10 77.7 22.3 234 165-483 24-277 (306)
257 2iwa_A Glutamine cyclotransfer 98.5 2.3E-06 7.7E-11 79.9 15.2 202 207-488 10-229 (266)
258 3nol_A Glutamine cyclotransfer 98.5 4.1E-06 1.4E-10 77.1 16.6 195 208-487 33-247 (262)
259 3dr2_A Exported gluconolactona 98.5 1.5E-06 5.2E-11 84.5 14.6 144 175-325 132-298 (305)
260 3hxj_A Pyrrolo-quinoline quino 98.4 1.8E-06 6E-11 85.0 13.3 158 161-336 47-205 (330)
261 1kb0_A Quinohemoprotein alcoho 98.4 3.1E-06 1.1E-10 91.7 15.5 152 187-340 129-352 (677)
262 2xe4_A Oligopeptidase B; hydro 98.4 1.7E-05 5.7E-10 87.4 20.8 157 171-333 170-353 (751)
263 3nok_A Glutaminyl cyclase; bet 98.4 1.7E-05 5.8E-10 73.0 17.1 193 207-481 44-252 (268)
264 3qqz_A Putative uncharacterize 98.3 0.00015 5E-09 67.2 22.6 166 168-334 21-204 (255)
265 2fp8_A Strictosidine synthase; 98.3 7.9E-05 2.7E-09 72.9 21.3 155 174-334 19-216 (322)
266 1yiq_A Quinohemoprotein alcoho 98.3 9.1E-06 3.1E-10 88.3 15.7 160 177-339 238-510 (689)
267 3v65_B Low-density lipoprotein 98.3 0.00023 7.8E-09 71.4 24.8 156 174-333 116-276 (386)
268 3sjl_D Methylamine dehydrogena 98.3 1.7E-05 5.8E-10 78.3 15.5 292 154-474 60-384 (386)
269 3v64_C Agrin; beta propeller, 98.2 0.0005 1.7E-08 67.9 25.8 157 174-334 73-234 (349)
270 3q7m_A Lipoprotein YFGL, BAMB; 98.2 6.1E-05 2.1E-09 75.5 19.5 145 187-338 144-300 (376)
271 3mbr_X Glutamine cyclotransfer 98.1 7E-05 2.4E-09 68.3 15.7 196 207-487 10-226 (243)
272 2ece_A 462AA long hypothetical 98.1 4.7E-05 1.6E-09 75.8 15.4 166 154-322 165-399 (462)
273 1npe_A Nidogen, entactin; glyc 98.1 0.00065 2.2E-08 64.2 22.9 140 188-333 3-154 (267)
274 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00027 9.2E-09 70.7 21.1 144 187-339 54-212 (376)
275 1kv9_A Type II quinohemoprotei 98.0 9.7E-05 3.3E-09 80.0 17.2 105 195-299 177-341 (668)
276 1ijq_A LDL receptor, low-densi 98.0 0.0023 7.8E-08 62.1 25.2 157 173-334 29-195 (316)
277 3p5b_L Low density lipoprotein 98.0 0.0033 1.1E-07 63.2 26.6 159 172-334 110-277 (400)
278 1k3i_A Galactose oxidase precu 97.9 0.00023 8E-09 77.0 17.4 113 178-294 190-326 (656)
279 3v64_C Agrin; beta propeller, 97.9 0.0044 1.5E-07 61.0 25.0 153 173-333 33-190 (349)
280 3sov_A LRP-6, low-density lipo 97.9 0.0036 1.2E-07 60.6 23.9 156 174-333 35-196 (318)
281 1kv9_A Type II quinohemoprotei 97.9 0.00013 4.5E-09 78.9 14.2 108 187-299 67-195 (668)
282 2ad6_A Methanol dehydrogenase 97.8 0.00025 8.7E-09 75.0 15.9 53 434-487 476-529 (571)
283 4a2l_A BT_4663, two-component 97.8 0.0023 8E-08 71.0 24.3 158 173-335 356-527 (795)
284 3tc9_A Hypothetical hydrolase; 97.8 0.0053 1.8E-07 62.3 24.7 152 175-333 138-300 (430)
285 2fp8_A Strictosidine synthase; 97.8 0.0032 1.1E-07 61.3 21.8 140 174-323 80-248 (322)
286 1flg_A Protein (quinoprotein e 97.8 0.00049 1.7E-08 72.9 16.7 48 434-481 498-546 (582)
287 3v65_B Low-density lipoprotein 97.8 0.0038 1.3E-07 62.5 22.2 151 175-333 78-233 (386)
288 1w6s_A Methanol dehydrogenase 97.7 0.00092 3.2E-08 70.7 16.4 47 434-480 485-532 (599)
289 3m0c_C LDL receptor, low-densi 97.6 0.011 3.7E-07 64.7 25.1 158 173-334 423-589 (791)
290 4hw6_A Hypothetical protein, I 97.6 0.014 4.9E-07 59.1 24.7 151 175-333 140-303 (433)
291 1n7d_A LDL receptor, low-densi 97.6 0.00017 5.8E-09 78.3 10.4 155 174-334 406-571 (699)
292 3qqz_A Putative uncharacterize 97.6 0.0046 1.6E-07 57.2 18.5 196 211-477 21-237 (255)
293 4a2l_A BT_4663, two-component 97.6 0.011 3.8E-07 65.5 24.8 157 173-336 309-482 (795)
294 3v9f_A Two-component system se 97.6 0.0067 2.3E-07 67.1 22.9 155 174-335 363-525 (781)
295 2p9w_A MAL S 1 allergenic prot 97.6 0.0018 6.3E-08 61.6 15.3 158 175-334 14-215 (334)
296 2xe4_A Oligopeptidase B; hydro 97.5 0.0026 9E-08 69.8 18.9 111 218-335 175-305 (751)
297 2ad6_A Methanol dehydrogenase 97.5 0.0043 1.5E-07 65.6 19.5 150 187-340 116-341 (571)
298 1ijq_A LDL receptor, low-densi 97.5 0.029 1E-06 54.2 23.9 136 196-333 10-151 (316)
299 2p4o_A Hypothetical protein; p 97.5 0.024 8.3E-07 54.5 23.3 120 207-334 23-147 (306)
300 3p5b_L Low density lipoprotein 97.5 0.035 1.2E-06 55.6 24.6 137 195-333 91-233 (400)
301 3v9f_A Two-component system se 97.4 0.026 9E-07 62.3 24.3 158 173-336 257-438 (781)
302 2ism_A Putative oxidoreductase 97.3 0.05 1.7E-06 53.4 23.3 104 174-281 31-153 (352)
303 4a0p_A LRP6, LRP-6, low-densit 97.3 0.067 2.3E-06 57.0 25.8 156 174-334 37-197 (628)
304 2vhf_A Ubiquitin carboxyl-term 97.3 1.4E-05 4.7E-10 76.2 -2.8 27 607-639 163-189 (374)
305 3m0c_C LDL receptor, low-densi 97.3 0.04 1.4E-06 60.2 23.7 137 195-333 403-545 (791)
306 2xbg_A YCF48-like protein; pho 97.3 0.073 2.5E-06 51.6 23.3 145 173-327 121-272 (327)
307 1w6s_A Methanol dehydrogenase 97.3 0.0047 1.6E-07 65.3 15.6 113 187-300 63-200 (599)
308 3kya_A Putative phosphatase; s 97.3 0.12 4.1E-06 52.7 25.2 158 175-333 140-340 (496)
309 3s94_A LRP-6, low-density lipo 97.2 0.064 2.2E-06 57.1 23.6 158 173-334 39-202 (619)
310 3amr_A 3-phytase; beta-propell 97.1 0.083 2.8E-06 50.8 21.3 141 187-332 41-208 (355)
311 2xzh_A Clathrin heavy chain 1; 97.1 0.2 7E-06 47.3 23.0 220 179-468 72-306 (365)
312 3s94_A LRP-6, low-density lipo 97.0 0.37 1.3E-05 51.2 26.9 159 174-338 84-247 (619)
313 3tc9_A Hypothetical hydrolase; 96.9 0.017 5.9E-07 58.5 15.4 111 218-335 138-258 (430)
314 1bpo_A Protein (clathrin); cla 96.9 0.32 1.1E-05 47.9 23.0 151 178-334 70-235 (494)
315 3sov_A LRP-6, low-density lipo 96.9 0.096 3.3E-06 50.5 19.9 159 175-339 80-243 (318)
316 3a9g_A Putative uncharacterize 96.9 0.14 4.6E-06 50.3 21.2 105 174-281 29-153 (354)
317 3sre_A PON1, serum paraoxonase 96.9 0.057 2E-06 52.6 18.1 155 175-333 51-251 (355)
318 1tl2_A L10, protein (tachylect 96.8 0.024 8.1E-07 50.3 13.5 147 175-332 42-206 (236)
319 1k3i_A Galactose oxidase precu 96.8 0.018 6.1E-07 62.2 15.4 93 155-248 221-324 (656)
320 1flg_A Protein (quinoprotein e 96.8 0.027 9.3E-07 59.5 16.3 144 196-342 291-524 (582)
321 2xbg_A YCF48-like protein; pho 96.7 0.052 1.8E-06 52.7 16.5 155 171-332 160-320 (327)
322 1n7d_A LDL receptor, low-densi 96.6 0.0082 2.8E-07 65.0 11.1 133 195-332 385-526 (699)
323 3das_A Putative oxidoreductase 96.6 0.55 1.9E-05 45.4 22.5 109 172-281 30-158 (347)
324 4hw6_A Hypothetical protein, I 96.5 0.18 6.1E-06 51.0 19.3 156 175-333 229-432 (433)
325 4a0p_A LRP6, LRP-6, low-densit 96.5 0.82 2.8E-05 48.6 25.2 156 174-333 340-507 (628)
326 2g8s_A Glucose/sorbosone dehyd 96.4 0.52 1.8E-05 46.1 21.4 104 174-281 18-148 (353)
327 2p9w_A MAL S 1 allergenic prot 96.3 0.068 2.3E-06 50.9 14.1 119 213-333 9-167 (334)
328 3pbp_A Nucleoporin NUP82; beta 96.3 0.13 4.3E-06 50.7 15.8 102 227-334 31-158 (452)
329 3amr_A 3-phytase; beta-propell 95.9 0.26 9.1E-06 47.3 15.7 175 155-333 52-262 (355)
330 2ism_A Putative oxidoreductase 95.6 1.6 5.4E-05 42.5 21.0 108 173-282 74-222 (352)
331 1tl2_A L10, protein (tachylect 95.4 1.3 4.4E-05 39.3 16.8 135 187-328 5-157 (236)
332 3sre_A PON1, serum paraoxonase 95.0 1.4 4.9E-05 42.7 18.2 32 421-452 221-252 (355)
333 3kya_A Putative phosphatase; s 95.0 1.3 4.5E-05 45.0 18.3 161 176-338 249-479 (496)
334 2vpj_A Kelch-like protein 12; 94.8 1 3.5E-05 42.7 16.6 142 184-335 62-232 (301)
335 3pbp_A Nucleoporin NUP82; beta 94.7 3.7 0.00013 40.5 19.8 143 183-330 30-208 (452)
336 1cru_A Protein (soluble quinop 94.6 4.1 0.00014 41.1 21.1 107 174-281 27-162 (454)
337 1xi4_A Clathrin heavy chain; a 94.6 0.86 2.9E-05 52.1 16.7 149 180-334 72-235 (1630)
338 3ii7_A Kelch-like protein 7; p 94.3 1.1 3.8E-05 42.5 15.6 141 184-334 55-225 (306)
339 3ei3_A DNA damage-binding prot 93.5 4 0.00014 46.7 20.1 130 197-331 808-952 (1158)
340 2vpj_A Kelch-like protein 12; 93.4 2.4 8.1E-05 40.0 15.9 142 187-334 16-184 (301)
341 2xn4_A Kelch-like protein 2; s 93.3 2.6 9E-05 39.7 16.0 141 184-334 61-229 (302)
342 3a9g_A Putative uncharacterize 92.7 7.7 0.00026 37.6 21.9 108 173-282 72-217 (354)
343 3ott_A Two-component system se 92.1 7.7 0.00026 42.2 19.7 155 173-335 62-221 (758)
344 1cru_A Protein (soluble quinop 92.0 8 0.00027 39.0 18.1 104 217-324 27-164 (454)
345 1zgk_A Kelch-like ECH-associat 91.6 4.3 0.00015 38.4 15.2 139 187-334 26-193 (308)
346 2be1_A Serine/threonine-protei 91.6 0.71 2.4E-05 44.4 9.3 113 187-300 11-139 (339)
347 2xzh_A Clathrin heavy chain 1; 91.1 11 0.00036 35.8 19.9 129 195-333 48-188 (365)
348 1zgk_A Kelch-like ECH-associat 90.7 4.5 0.00015 38.3 14.2 142 184-335 70-241 (308)
349 3ei3_A DNA damage-binding prot 89.5 9.4 0.00032 43.7 17.5 147 179-334 837-999 (1158)
350 1bpo_A Protein (clathrin); cla 88.8 20 0.00067 35.5 19.4 130 195-334 47-188 (494)
351 4asc_A Kelch repeat and BTB do 88.7 16 0.00055 34.4 18.3 141 187-336 6-176 (315)
352 3ii7_A Kelch-like protein 7; p 88.3 4.2 0.00014 38.4 12.0 143 184-336 101-274 (306)
353 2xn4_A Kelch-like protein 2; s 88.3 3.4 0.00012 38.9 11.3 143 184-336 108-278 (302)
354 2woz_A Kelch repeat and BTB do 87.2 15 0.00053 34.6 15.3 142 183-334 55-231 (318)
355 2g8s_A Glucose/sorbosone dehyd 87.0 23 0.00077 34.2 20.1 108 173-281 65-216 (353)
356 4hvt_A Ritya.17583.B, post-pro 86.7 37 0.0013 36.4 20.1 61 420-482 349-414 (711)
357 2con_A RUH-035 protein, NIN on 85.8 0.53 1.8E-05 33.7 2.8 38 586-624 27-66 (79)
358 3qhy_B Beta-lactamase inhibito 82.8 30 0.001 32.1 15.4 144 175-334 25-168 (282)
359 2wg3_C Hedgehog-interacting pr 82.1 12 0.00041 37.8 12.1 108 174-282 14-158 (463)
360 4asc_A Kelch repeat and BTB do 81.2 6.7 0.00023 37.2 9.7 143 184-336 98-279 (315)
361 2uvk_A YJHT; unknown function, 80.7 14 0.00048 35.5 12.0 53 283-338 286-346 (357)
362 2woz_A Kelch repeat and BTB do 80.3 10 0.00034 35.9 10.6 142 184-335 109-288 (318)
363 3qhy_B Beta-lactamase inhibito 79.5 39 0.0013 31.3 17.4 144 175-334 64-207 (282)
364 4gq2_M Nucleoporin NUP120; bet 79.1 29 0.00098 38.8 15.0 34 218-251 237-270 (950)
365 2uvk_A YJHT; unknown function, 76.8 25 0.00087 33.7 12.5 63 184-249 19-97 (357)
366 3sbq_A Nitrous-oxide reductase 76.4 11 0.00037 38.6 9.3 66 422-488 379-459 (638)
367 2wg3_C Hedgehog-interacting pr 74.3 44 0.0015 33.6 13.6 106 217-325 14-160 (463)
368 2zwa_A Leucine carboxyl methyl 73.6 24 0.00084 37.8 12.2 149 184-336 451-637 (695)
369 3ott_A Two-component system se 72.8 1.1E+02 0.0037 33.0 18.0 149 175-334 473-626 (758)
370 2be1_A Serine/threonine-protei 72.2 69 0.0024 30.5 14.2 108 187-296 112-236 (339)
371 3s25_A Hypothetical 7-bladed b 71.5 59 0.002 30.4 13.0 135 179-333 58-215 (302)
372 1sqj_A OXG-RCBH, oligoxylogluc 69.8 61 0.0021 35.3 14.4 62 173-235 14-83 (789)
373 4gq2_M Nucleoporin NUP120; bet 68.4 16 0.00056 40.7 9.7 38 174-212 236-273 (950)
374 3b7f_A Glycosyl hydrolase, BNR 68.3 90 0.0031 30.3 20.8 68 174-242 115-203 (394)
375 1xi4_A Clathrin heavy chain; a 67.6 51 0.0017 38.2 13.0 181 155-338 127-335 (1630)
376 3das_A Putative oxidoreductase 66.6 92 0.0032 29.8 23.6 108 172-281 78-220 (347)
377 3q6k_A 43.2 kDa salivary prote 66.2 99 0.0034 30.0 15.7 159 175-334 88-306 (381)
378 2zwa_A Leucine carboxyl methyl 63.9 59 0.002 34.8 12.7 150 183-336 396-579 (695)
379 3sbq_A Nitrous-oxide reductase 57.3 36 0.0012 34.9 8.6 71 262-334 322-408 (638)
380 2i5o_A DNA polymerase ETA; zin 54.0 6.5 0.00022 23.7 1.7 17 583-599 3-19 (39)
381 3zwu_A Alkaline phosphatase PH 49.4 61 0.0021 33.7 9.3 59 175-234 477-548 (592)
382 4fhn_B Nucleoporin NUP120; pro 48.4 10 0.00036 43.4 3.7 38 422-460 239-276 (1139)
383 4a9v_A PHOX; hydrolase, beta-p 47.9 82 0.0028 32.4 9.6 61 174-235 476-549 (592)
384 3f7f_A Nucleoporin NUP120; nuc 44.2 33 0.0011 36.4 6.2 38 174-214 222-259 (729)
385 3f7f_A Nucleoporin NUP120; nuc 42.8 20 0.00069 38.0 4.4 38 421-461 222-259 (729)
386 2cn3_A Xyloglucanase, beta-1,4 41.0 3.6E+02 0.012 28.8 14.6 59 175-234 24-91 (737)
387 4fhn_B Nucleoporin NUP120; pro 39.6 19 0.00063 41.4 3.9 38 175-213 239-276 (1139)
388 3u50_C Telomerase-associated p 39.2 13 0.00043 31.4 1.8 13 586-598 56-68 (172)
389 1fv5_A First zinc finger of U- 36.7 11 0.00037 22.1 0.8 15 584-598 3-17 (36)
390 3b7f_A Glycosyl hydrolase, BNR 34.0 3.2E+02 0.011 26.2 20.4 50 187-238 23-77 (394)
391 1df6_A Cycloviolacin O1; cycli 31.5 5.8 0.0002 21.9 -0.9 7 2-8 21-27 (30)
392 2elm_A Zinc finger protein 406 29.9 26 0.0009 19.9 1.8 13 586-598 6-18 (37)
393 1srk_A Zinc finger protein ZFP 28.4 27 0.00091 19.3 1.6 13 586-598 4-16 (35)
394 4a9v_A PHOX; hydrolase, beta-p 28.1 2.3E+02 0.0077 29.2 9.1 57 264-321 477-548 (592)
395 3cc2_Z 50S ribosomal protein L 27.3 20 0.00069 27.6 1.0 28 586-613 57-84 (116)
396 1vq8_Z 50S ribosomal protein L 27.2 21 0.0007 25.9 1.0 27 587-613 25-51 (83)
397 1ffk_W Ribosomal protein L37AE 26.5 26 0.00088 24.6 1.4 30 584-613 22-51 (73)
398 2kvh_A Zinc finger and BTB dom 26.4 29 0.001 17.6 1.4 11 588-598 2-12 (27)
399 1p7a_A BF3, BKLF, kruppel-like 26.2 23 0.0008 19.9 1.0 13 586-598 8-20 (37)
400 3zwu_A Alkaline phosphatase PH 25.9 1.8E+02 0.0062 30.1 8.2 55 265-320 478-547 (592)
401 2elx_A Zinc finger protein 406 25.9 32 0.0011 18.9 1.6 13 586-598 4-16 (35)
402 2elt_A Zinc finger protein 406 24.4 33 0.0011 19.0 1.5 13 586-598 6-18 (36)
403 2kvf_A Zinc finger and BTB dom 24.3 32 0.0011 17.5 1.3 11 588-598 2-12 (28)
404 1qmy_A Protease, leader protea 23.7 12 0.0004 29.7 -0.8 26 1-29 21-46 (167)
405 2elp_A Zinc finger protein 406 22.7 38 0.0013 18.9 1.6 13 586-598 6-18 (37)
406 2els_A Zinc finger protein 406 22.5 38 0.0013 18.8 1.5 13 586-598 6-18 (36)
407 2elv_A Zinc finger protein 406 22.5 39 0.0013 18.7 1.5 13 586-598 6-18 (36)
408 1loi_A Cyclic 3',5'-AMP specif 22.1 11 0.00039 19.0 -0.8 9 590-598 6-14 (26)
409 2czr_A TBP-interacting protein 21.6 34 0.0012 28.4 1.4 24 577-600 137-165 (226)
410 2elq_A Zinc finger protein 406 21.6 41 0.0014 18.6 1.5 13 586-598 6-18 (36)
411 1l1o_C Replication protein A 7 21.6 45 0.0016 28.4 2.3 14 586-599 59-72 (181)
412 2elr_A Zinc finger protein 406 21.2 35 0.0012 18.9 1.1 13 586-598 6-18 (36)
413 2kvg_A Zinc finger and BTB dom 21.2 28 0.00096 17.8 0.6 10 589-598 3-12 (27)
414 2m0d_A Zinc finger and BTB dom 21.1 38 0.0013 17.4 1.2 11 588-598 2-12 (30)
415 1njq_A Superman protein; zinc- 20.8 41 0.0014 19.2 1.4 13 586-598 3-15 (39)
416 3a0f_A Xyloglucanase; beta-pro 20.5 8E+02 0.027 26.2 19.3 55 171-226 18-84 (763)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-40 Score=342.80 Aligned_cols=283 Identities=19% Similarity=0.337 Sum_probs=245.6
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+..+...|..+.+.++.......+.+ ..+++||+.+++++.++.+|.+.|++++|+|+| .+|++|+.||+|+|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~D------g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~i 176 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASED------ATIKVWDYETGDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKL 176 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESS------SCEEEEETTTCCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCE
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 44566777777766665544433333 358999999999999999999999999999999 89999999999999
Q ss_pred EeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEc
Q psy18073 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATC 280 (639)
Q Consensus 201 Wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 280 (639)
||+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||++++.... ....+...+.++.++|++.++++|
T Consensus 177 wd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~----~~~~h~~~v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 177 WDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK----TFTGHREWVRMVRPNQDGTLIASC 252 (410)
T ss_dssp EETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE----EEECCSSCEEEEEECTTSSEEEEE
T ss_pred EeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE----EEeCCCccEEEEEECCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999876531 222355689999999999999998
Q ss_pred CC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCC-------------------CcEEEEEeCCCcEEEEECCCccccC
Q psy18073 281 GD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPID-------------------KHILASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 281 ~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~-------------------~~~l~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
+. .|++||+.++++...+.+|...|.+++|+|+. +.+|++|+.||+|++||++++.++
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~- 331 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL- 331 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE-
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE-
Confidence 84 99999999999999999999999999999932 568999999999999999876543
Q ss_pred CccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc
Q psy18073 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH 419 (639)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 419 (639)
..+.+|
T Consensus 332 --------------------------------------------------------------------------~~~~~h 337 (410)
T 1vyh_C 332 --------------------------------------------------------------------------MTLVGH 337 (410)
T ss_dssp --------------------------------------------------------------------------EEEECC
T ss_pred --------------------------------------------------------------------------EEEECC
Confidence 456789
Q ss_pred ccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccccccccccCc-cccc
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQ 493 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~ 493 (639)
.+.|++++|+|+| .+|+||+.||+|++||+.+++++.++.+|...|++++|+|++..++. .++|+. +.|.
T Consensus 338 ~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s---gs~D~~i~vW~ 408 (410)
T 1vyh_C 338 DNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVT---GSVDQTVKVWE 408 (410)
T ss_dssp SSCEEEEEECSSS-SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEE---EETTSEEEEEC
T ss_pred CCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEE---EeCCCcEEEEe
Confidence 9999999999999 99999999999999999999999999999999999999999976653 445543 6664
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.7e-40 Score=322.47 Aligned_cols=275 Identities=22% Similarity=0.325 Sum_probs=222.1
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
..++|.+|.+.|++++|+|++ .+|++|+.||+|++||+.++..+..+.+|..+|.+++|+|++++|++|+.|++|++||
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 457789999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCC-ceeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERN-EPIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~-~~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
+.+++.. .....+...|.+++|+|++.++++|+. .|++||++++ .....+.+|...|.+++|+|.++.+|++|
T Consensus 84 ~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 84 YNTGEKV----VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp TTTCCEE----EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred CCCCcEE----EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 9987653 222345678999999999999999985 9999999987 45677899999999999999778899999
Q ss_pred eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecc
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
+.||+|++||++++.....+...... .+. .+.+.|. +....+...+.
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~---~v~------~~~~~~~------------------------~~~~~l~s~s~ 206 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQER---GVN------YVDYYPL------------------------PDKPYMITASD 206 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTT---CEE------EEEECCS------------------------TTCCEEEEEET
T ss_pred eCCCeEEEEECCCCCccceeccCCcC---cEE------EEEEEEc------------------------CCCCEEEEEcC
Confidence 99999999999876543222110000 000 0111111 01111222222
Q ss_pred ccccccc---cccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccc
Q psy18073 402 TKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 402 ~~~~~~~---~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~ 478 (639)
...++.| ...++..+.+|...|.+++|+|++ .+|+|||.||+|++||+.+++++.++..|...+++++|+|++...
T Consensus 207 D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCce
Confidence 2222222 345568889999999999999999 899999999999999999999999999999999999999998643
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=321.34 Aligned_cols=281 Identities=17% Similarity=0.284 Sum_probs=237.5
Q ss_pred hcccCccccccCCCCCC----CCCCCCchhHHHhhhhhhhhhhhccc--cccccccccccEEEEEECCCCCeeEEEeeCC
Q psy18073 122 RETKTSIHRIPRNIDPS----LHPFEGPREYVRALNATKLERVFAKP--FVANLDGHKDGISCLAKHPTKLSTIISGAYD 195 (639)
Q Consensus 122 ~~~~~~i~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~d 195 (639)
.++...|..+.+.++.. .....+.+ ..+++|++..+. +...+.||...|.+++|+|++ .++++|+.|
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D------~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D 101 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLD------DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTL-PIAASSSLD 101 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSS-SEEEEEETT
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCC------CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCC-CEEEEEeCC
Confidence 46777788777665421 22222222 458899886654 345789999999999999999 899999999
Q ss_pred CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCC
Q psy18073 196 GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSK 275 (639)
Q Consensus 196 g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 275 (639)
++|++||+.+++.+..+..|...+.+++|+|++++|++++.||.|++||++++... .....+...+.+++|+|++.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~----~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE----YSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE----EEEECSSSCEEEEEECTTSS
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee----EEecCCCceEEEEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999976543 22223456899999999999
Q ss_pred EEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccc
Q psy18073 276 IFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIH 353 (639)
Q Consensus 276 ~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 353 (639)
++++++. .|++||+++++.+..+.+|..+|.+++|+| ++++|++|+.||+|++||++++...
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~--------------- 241 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLA--------------- 241 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEE---------------
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCccee---------------
Confidence 9999884 999999999999999999999999999999 8999999999999999999765432
Q ss_pred cccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCc
Q psy18073 354 RIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKL 433 (639)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 433 (639)
..+.+|...|.+++|+|++
T Consensus 242 ------------------------------------------------------------~~~~~h~~~v~~~~~sp~~- 260 (321)
T 3ow8_A 242 ------------------------------------------------------------GTLSGHASWVLNVAFCPDD- 260 (321)
T ss_dssp ------------------------------------------------------------EEECCCSSCEEEEEECTTS-
T ss_pred ------------------------------------------------------------EEEcCCCCceEEEEECCCC-
Confidence 4567899999999999999
Q ss_pred ceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccccccccccCc-cccc
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQ 493 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~ 493 (639)
.+|+||+.||+|++||+.+++++.++.+|.+.|.+++|+|+|..++. .+.+.. +.|.
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s---~~~d~~i~vwd 318 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS---VGDDQEIHIYD 318 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE---EETTCCEEEEE
T ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEE---EeCCCeEEEEe
Confidence 99999999999999999999999999999999999999999977654 334433 6664
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-37 Score=312.74 Aligned_cols=286 Identities=18% Similarity=0.288 Sum_probs=223.9
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
...+|.||.+.|++++|+|++ .+|++|+.||+|+|||+.+++.+..+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 457789999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
+.+.............+...+.++.|++++.+++++.+ .|++||+++++.+..+.+|.+.|.+++|+| ++.++++|+.
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sg~~ 204 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGAC 204 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEET
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC-CCCEEEEEeC
Confidence 98754322222233345678999999998886555554 999999999999999999999999999999 8899999999
Q ss_pred CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccc
Q psy18073 324 DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATK 403 (639)
Q Consensus 324 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (639)
||+|++||++++.....+... ... ...+.++|.+ ..+...+.+.
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h----~~~------v~~v~~~p~~--------------------------~~l~s~s~d~ 248 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGH----ESD------INAICFFPNG--------------------------NAFATGSDDA 248 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCC----SSC------EEEEEECTTS--------------------------SEEEEEETTS
T ss_pred CCcEEEEECCCCeeEEEEcCC----cCC------EEEEEEcCCC--------------------------CEEEEEcCCC
Confidence 999999999987665432211 000 0112223322 2222222222
Q ss_pred cccccc---ccccccc--cCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccc
Q psy18073 404 LERVFA---KPFVANL--DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 404 ~~~~~~---~~~~~~~--~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~ 478 (639)
.++.|+ ...+..+ ..+...|++++|+|+| .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|||..+
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l 327 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAV 327 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEE
Confidence 222222 1222222 2344589999999999 999999999999999999999999999999999999999999776
Q ss_pred cccccccccCc-ccc
Q psy18073 479 DLTRSFGWESS-DAW 492 (639)
Q Consensus 479 ~~~~~~~~~~~-~~~ 492 (639)
+.+ ++|+. +.|
T Consensus 328 ~s~---s~D~~i~iW 339 (340)
T 1got_B 328 ATG---SWDSFLKIW 339 (340)
T ss_dssp EEE---ETTSCEEEE
T ss_pred EEE---cCCccEEec
Confidence 543 45543 666
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=314.95 Aligned_cols=301 Identities=13% Similarity=0.186 Sum_probs=216.1
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC-----------CceEEEEeccCCceEEEE
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-----------QSCVQTYQAHDGHVRDVC 223 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~-----------~~~~~~~~~h~~~V~~v~ 223 (639)
.+.|++.+.. ...|...|.+++|+||| .+|++++ |+++++||... .........|...|.+++
T Consensus 16 ~r~w~~~~~~----~~~~~~~v~~~~fs~dG-~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNA----PACMERQLEAARYRSDG-ALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT 89 (344)
T ss_dssp -------CCS----CSSCCSEEEEEEECTTS-CEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred ccccCCCCCC----cccccCCEEEEEECCCC-CEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence 3456654333 23577889999999999 8888887 77888887321 111112234677899999
Q ss_pred EcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecC
Q psy18073 224 FLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWN 301 (639)
Q Consensus 224 ~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h 301 (639)
|+|++ .|++|+.||+|+|||+.+++...........|...|.+++|+|++.+|++|+. .|++||+++++++..+.+|
T Consensus 90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 168 (344)
T 4gqb_B 90 WVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH 168 (344)
T ss_dssp EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc
Confidence 99985 78899999999999999887765444445567789999999999999999984 8999999999999999999
Q ss_pred CccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccc
Q psy18073 302 VDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKL 381 (639)
Q Consensus 302 ~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 381 (639)
.+.|.+++|+|++..+|++|+.||+|++||+++++....+........ ...+.++|.+.
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~--------~~~~~~~p~~~------------- 227 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYL--------PTSLAWHPQQS------------- 227 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCC--------EEEEEECSSCT-------------
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecc--------ceeeeecCCCC-------------
Confidence 999999999996667899999999999999999876654322111100 00112222211
Q ss_pred ceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeee
Q psy18073 382 ERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 461 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~ 461 (639)
.+ ..++..+.. ...++......+..+.+|.+.|++++|+|++..+|||||.||+|+|||+.+++++ .+.+
T Consensus 228 -~~---l~sg~~dg~-----v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~ 297 (344)
T 4gqb_B 228 -EV---FVFGDENGT-----VSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQA 297 (344)
T ss_dssp -TE---EEEEETTSE-----EEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECC
T ss_pred -cc---eEEeccCCc-----EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcC
Confidence 01 111111111 1112223455668899999999999999998568999999999999999998765 5679
Q ss_pred eccccccccccCCcccccccccccccCc-cccccC
Q psy18073 462 HDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQH 495 (639)
Q Consensus 462 h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~~ 495 (639)
|.+.|++|+|+|++..+. ++.|+|.. ..|...
T Consensus 298 H~~~V~~v~~sp~~~~ll--as~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHSLL--TTVGWDHQVVHHVVP 330 (344)
T ss_dssp CSSCEEEEEECSSSTTEE--EEEETTSCEEEEECC
T ss_pred CCCCEEEEEEeCCCCeEE--EEEcCCCeEEEEECC
Confidence 999999999999997643 34567765 777643
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-37 Score=320.49 Aligned_cols=245 Identities=22% Similarity=0.387 Sum_probs=217.2
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
....+.||.++|++++|+|++ .+|++|+.||+|+|||+.+++....+.+|.+.|.+++|+|++++|++|+.||+|++||
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred ceEeecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 356788999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
+.+++....+ ..+...|.+++|+|++..+++++. .|++||++++.++..+.+|...|.++.|+| ++.+|++|+
T Consensus 179 ~~~~~~~~~~----~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s 253 (410)
T 1vyh_C 179 FQGFECIRTM----HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCS 253 (410)
T ss_dssp TTSSCEEECC----CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred CCCCceeEEE----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEc
Confidence 9876543222 134568999999999999999884 999999999999999999999999999999 899999999
Q ss_pred CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccc
Q psy18073 323 SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNAT 402 (639)
Q Consensus 323 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (639)
.||+|++||++++...
T Consensus 254 ~D~~v~vwd~~~~~~~---------------------------------------------------------------- 269 (410)
T 1vyh_C 254 NDQTVRVWVVATKECK---------------------------------------------------------------- 269 (410)
T ss_dssp TTSCEEEEETTTCCEE----------------------------------------------------------------
T ss_pred CCCeEEEEECCCCcee----------------------------------------------------------------
Confidence 9999999999875432
Q ss_pred cccccccccccccccCcccceeEEeeCCC--------------------CcceEEeccCCceEEEecCCccccceeeeee
Q psy18073 403 KLERVFAKPFVANLDGHKDGISCLAKHPT--------------------KLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462 (639)
Q Consensus 403 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--------------------~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h 462 (639)
..+.+|...|.+++|+|+ | .+|++|+.||+|++||+++++++.++.+|
T Consensus 270 -----------~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 270 -----------AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp -----------EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C-CEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred -----------eEecCCCceEEEEEEcCcccccchhhhccccccccCCCC-CEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 445678888899999886 4 68999999999999999999999999999
Q ss_pred ccccccccccCCcccccccccccccC-cccccc
Q psy18073 463 DGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 463 ~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
.+.|++++|+|+|..++.+ +.|+ .+.|..
T Consensus 338 ~~~v~~v~~~~~g~~l~s~---s~D~~i~vwd~ 367 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSC---ADDKTLRVWDY 367 (410)
T ss_dssp SSCEEEEEECSSSSCEEEE---ETTTEEEEECC
T ss_pred CCcEEEEEEcCCCCEEEEE---eCCCeEEEEEC
Confidence 9999999999999876543 4444 378853
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.4e-37 Score=310.38 Aligned_cols=301 Identities=14% Similarity=0.171 Sum_probs=213.8
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeC------CCcEEEEeCCCCce----EEEEeccCCceEEEEE
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAY------DGEVKVWNLTSQSC----VQTYQAHDGHVRDVCF 224 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~------dg~i~vWd~~~~~~----~~~~~~h~~~V~~v~~ 224 (639)
.+.|++... ...+|...|++++||||| .+||||+. |+.|++|+..++.. .....+|...|.+++|
T Consensus 28 ~~~w~~p~~----~p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 102 (357)
T 4g56_B 28 GSAWGRPVT----APACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAW 102 (357)
T ss_dssp ----------------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEE
T ss_pred ccccCCCCC----CcccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEE
Confidence 455665432 235799999999999999 99999997 78899999877653 2334578999999999
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCC
Q psy18073 225 LPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNV 302 (639)
Q Consensus 225 sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~ 302 (639)
+|+++ +++++.||+|+|||+.+++...........+...|.+++|+|++.++++++. .|++||+++++.+..+.+|.
T Consensus 103 s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 103 VSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS 181 (357)
T ss_dssp ETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred cCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 99975 5567889999999999877665555555567789999999999999999884 89999999999999999999
Q ss_pred ccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccc
Q psy18073 303 DSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLE 382 (639)
Q Consensus 303 ~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 382 (639)
..|.+++|+|++..++++++.||+|++||++++++........... ....+.|+|.+.
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~--------~v~~v~~sp~~~-------------- 239 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT--------IPTSVTWHPEKD-------------- 239 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS--------CEEEEEECTTST--------------
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc--------cccchhhhhccc--------------
Confidence 9999999999556789999999999999999887654332111000 001122233221
Q ss_pred eeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeee
Q psy18073 383 RVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462 (639)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h 462 (639)
.+ ..++..+. ....++......+..+.+|...|++++|+|++..+|||||.||+|+|||+++++++..+ +|
T Consensus 240 ~~---la~g~~d~-----~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H 310 (357)
T 4g56_B 240 DT---FACGDETG-----NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SH 310 (357)
T ss_dssp TE---EEEEESSS-----CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CC
T ss_pred ce---EEEeeccc-----ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CC
Confidence 01 11111111 01122233445667889999999999999998678999999999999999999988776 89
Q ss_pred ccccccccccC-CcccccccccccccCc-cccccC
Q psy18073 463 DGHVRDTSTRP-AVETTDLTRSFGWESS-DAWQQH 495 (639)
Q Consensus 463 ~~~v~~v~~sp-dg~~~~~~~~~~~~~~-~~~~~~ 495 (639)
.+.|++|+|+| |+..++ +.++|.. +.|...
T Consensus 311 ~~~V~~vafsP~d~~~l~---s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFT---TVGWDHKVLHHHLP 342 (357)
T ss_dssp SSCEEEEEECSSSTTEEE---EEETTSCEEEEECC
T ss_pred CCCEEEEEEeCCCCCEEE---EEcCCCeEEEEECC
Confidence 99999999999 665543 3456664 888643
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-36 Score=304.53 Aligned_cols=287 Identities=17% Similarity=0.281 Sum_probs=224.2
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
..++|.||.+.|++++|+|++ .+||||+.||+|+|||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 457789999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCc--ccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCC-CCcEEE
Q psy18073 245 SELSESDH--IVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPI-DKHILA 319 (639)
Q Consensus 245 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~-~~~~l~ 319 (639)
+....... ........+...|.+++|+|++..+++++. +|++||+++++++..+.+|...|.+++|+|. ++++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 97643221 111223346678999999999999888874 9999999999999999999999999999884 468999
Q ss_pred EEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeee
Q psy18073 320 SCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRAL 399 (639)
Q Consensus 320 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (639)
+|+.||+|++||+++++++..+... ... ...+.++|.+ ..+...
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h----~~~------v~~v~~~p~~--------------------------~~l~s~ 258 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETH----ESD------VNSVRYYPSG--------------------------DAFASG 258 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCC----SSC------EEEEEECTTS--------------------------SEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCC----CCC------eEEEEEeCCC--------------------------CEEEEE
Confidence 9999999999999988765433211 000 0112222222 222222
Q ss_pred cccccccccc---cccccccc--CcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCC
Q psy18073 400 NATKLERVFA---KPFVANLD--GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 400 ~~~~~~~~~~---~~~~~~~~--~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
+.+..++.|+ ...+..+. .+...+.+++|+|+| .+|++|+.||+|++||+.+++.+..+.+|.+.|++++|+||
T Consensus 259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCC
Confidence 2222222222 11222232 334578999999999 99999999999999999999999999999999999999999
Q ss_pred cccccccccccccCc-ccc
Q psy18073 475 VETTDLTRSFGWESS-DAW 492 (639)
Q Consensus 475 g~~~~~~~~~~~~~~-~~~ 492 (639)
|..++.+ ++|+. +.|
T Consensus 338 g~~l~sg---s~D~~v~vW 353 (354)
T 2pbi_B 338 GTAFCSG---SWDHTLRVW 353 (354)
T ss_dssp SSCEEEE---ETTSEEEEE
T ss_pred CCEEEEE---cCCCCEEec
Confidence 9876543 44543 555
No 9
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-37 Score=313.39 Aligned_cols=291 Identities=18% Similarity=0.280 Sum_probs=234.2
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccc------------------cEEEEEECCC
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKD------------------GISCLAKHPT 184 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~------------------~V~~l~~sp~ 184 (639)
.+...|..+.+.++......... ..+++|++.+++.+..+.+|.. .|++++|+|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~-------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCN-------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECB-------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEEECCCCCEEEEEcC-------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 35667777777777766554321 3678999998888888776643 4999999999
Q ss_pred CCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCe
Q psy18073 185 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSV 264 (639)
Q Consensus 185 ~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 264 (639)
| ++|++|+.||+|+|||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++. .........
T Consensus 135 g-~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~-----~~~~~~~~~ 208 (393)
T 1erj_A 135 G-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-----SLTLSIEDG 208 (393)
T ss_dssp S-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----EEEEECSSC
T ss_pred C-CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee-----EEEEEcCCC
Confidence 9 9999999999999999999999999999999999999999999999999999999999997654 344456678
Q ss_pred eEEeeecC-CCCEEEEcCC--eeEEEeCCCCceeeee-------ecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 265 ISSISHQR-KSKIFATCGD--QCQLWEHERNEPIRAF-------SWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 265 v~~~~~~~-~~~~l~~~~~--~i~vwd~~~~~~~~~~-------~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
+.+++++| ++.++++++. .|++||+++++.+..+ .+|...|.+++|+| ++++|++|+.||+|++||+++
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCC
Confidence 99999999 8999999884 9999999999887776 57999999999999 899999999999999999986
Q ss_pred ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccc
Q psy18073 335 TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVA 414 (639)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (639)
.......... ....+..
T Consensus 288 ~~~~~~~~~~---------------------------------------------------------------~~~~~~~ 304 (393)
T 1erj_A 288 ANNKSDSKTP---------------------------------------------------------------NSGTCEV 304 (393)
T ss_dssp ----------------------------------------------------------------------------CEEE
T ss_pred CCCcccccCC---------------------------------------------------------------CCCcceE
Confidence 5432110000 0011124
Q ss_pred cccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccC------CcccccccccccccC
Q psy18073 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP------AVETTDLTRSFGWES 488 (639)
Q Consensus 415 ~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~sp------dg~~~~~~~~~~~~~ 488 (639)
.+.+|.+.|.+++|+|++ .+|+|||.||.|++||+.+++++..+.+|.+.|.+++|+| ++..++ +.+.|+
T Consensus 305 ~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~---sgs~Dg 380 (393)
T 1erj_A 305 TYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA---TGSGDC 380 (393)
T ss_dssp EEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE---EEETTS
T ss_pred EEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE---EECCCC
Confidence 567899999999999999 9999999999999999999999999999999999999886 454443 344554
Q ss_pred c-ccccc
Q psy18073 489 S-DAWQQ 494 (639)
Q Consensus 489 ~-~~~~~ 494 (639)
. +.|.-
T Consensus 381 ~i~iW~~ 387 (393)
T 1erj_A 381 KARIWKY 387 (393)
T ss_dssp EEEEEEE
T ss_pred cEEECcc
Confidence 3 77753
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=301.85 Aligned_cols=248 Identities=19% Similarity=0.253 Sum_probs=213.3
Q ss_pred cccccccccccccEEEEEECCCC---CeeEEEeeCCCcEEEEeCCCCce--EEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy18073 163 KPFVANLDGHKDGISCLAKHPTK---LSTIISGAYDGEVKVWNLTSQSC--VQTYQAHDGHVRDVCFLPDGSQFLSVGID 237 (639)
Q Consensus 163 ~~~~~~l~~H~~~V~~l~~sp~~---~~~l~sgs~dg~i~vWd~~~~~~--~~~~~~h~~~V~~v~~sp~~~~l~s~s~D 237 (639)
+.+.+.+++|.+.|++++|+|++ ..+|+||+.|++|+|||+.+++. ...+.+|...|.+++|+|++.++++++.|
T Consensus 22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 33456678999999999999853 16899999999999999987754 45688999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCC
Q psy18073 238 NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDK 315 (639)
Q Consensus 238 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~ 315 (639)
++|++||+.+++.. .....+...+.+++|+|++.++++++. .|++||+++++....+..|...|.+++|+| ++
T Consensus 102 ~~i~lWd~~~~~~~----~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg 176 (321)
T 3ow8_A 102 AHIRLWDLENGKQI----KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DG 176 (321)
T ss_dssp SEEEEEETTTTEEE----EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TS
T ss_pred CcEEEEECCCCCEE----EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CC
Confidence 99999999986543 112234557889999999999999985 999999999999999999999999999999 89
Q ss_pred cEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccc
Q psy18073 316 HILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395 (639)
Q Consensus 316 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 395 (639)
++|++|+.||.|++||+++++.+
T Consensus 177 ~~lasg~~dg~i~iwd~~~~~~~--------------------------------------------------------- 199 (321)
T 3ow8_A 177 KYLASGAIDGIINIFDIATGKLL--------------------------------------------------------- 199 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEE---------------------------------------------------------
T ss_pred CEEEEEcCCCeEEEEECCCCcEE---------------------------------------------------------
Confidence 99999999999999999876543
Q ss_pred eeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCc
Q psy18073 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAV 475 (639)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg 475 (639)
..+.+|..+|.+++|+|++ .+|++|+.||+|++||+++++.+.++.+|...|.+++|+|+|
T Consensus 200 ------------------~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 200 ------------------HTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp ------------------EEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred ------------------EEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC
Confidence 5567899999999999999 999999999999999999999999999999999999999999
Q ss_pred ccccccccccccC-cccccc
Q psy18073 476 ETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 476 ~~~~~~~~~~~~~-~~~~~~ 494 (639)
..++.+ +.+. .+.|..
T Consensus 261 ~~l~s~---s~D~~v~iwd~ 277 (321)
T 3ow8_A 261 THFVSS---SSDKSVKVWDV 277 (321)
T ss_dssp SEEEEE---ETTSCEEEEET
T ss_pred CEEEEE---eCCCcEEEEeC
Confidence 876543 3444 377853
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=305.91 Aligned_cols=224 Identities=21% Similarity=0.272 Sum_probs=188.5
Q ss_pred hhhhhhhhhccccccc----cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCC
Q psy18073 153 NATKLERVFAKPFVAN----LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~----l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~ 228 (639)
+.+++||+.+++.+.. +.+|.+.|++++|+|+| ++|++|+.||+|++||+.+++++..+.+|.+.|++++|+|++
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 4589999988876644 44899999999999999 999999999999999999999999999999999999999987
Q ss_pred -CEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCC-CCEEEEcCC--eeEEEeCCCCceeeeeecCCcc
Q psy18073 229 -SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRK-SKIFATCGD--QCQLWEHERNEPIRAFSWNVDS 304 (639)
Q Consensus 229 -~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~ 304 (639)
.+|++|+.|++|++||+++++....+.. ..+...+.+++|+|+ +.++++|+. .|++||+++++++..+.+|.+.
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~ 259 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKPASQIGC--SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC 259 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSCEEECC------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC
T ss_pred CCceeeeccccccccccccccceeeeeec--ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC
Confidence 5789999999999999998765432211 223456889999985 567887763 8999999999999999999999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccccee
Q psy18073 305 LHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERV 384 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 384 (639)
|++++|+|++.++|++|+.||+|+|||++++++
T Consensus 260 v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~----------------------------------------------- 292 (344)
T 4gqb_B 260 VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL----------------------------------------------- 292 (344)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-----------------------------------------------
T ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-----------------------------------------------
Confidence 999999995557899999999999999876543
Q ss_pred eeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccc
Q psy18073 385 FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC 455 (639)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~ 455 (639)
..+.+|.+.|++|+|+|++..+|+|||.||+|++|++.+...
T Consensus 293 -----------------------------~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 293 -----------------------------FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp -----------------------------EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred -----------------------------EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 234689999999999999956788999999999999987543
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.2e-36 Score=297.27 Aligned_cols=288 Identities=18% Similarity=0.266 Sum_probs=224.0
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
...++.||.+.|++++|+|++ ++|++|+.||.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 456788999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
+++++.. .....+...|.+++|+|++.++++++. .|++||+++++.+..+..|..+|.+++|+| ++.+|++|+
T Consensus 94 ~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 168 (312)
T 4ery_A 94 VSSGKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSS 168 (312)
T ss_dssp TTTCCEE----EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred CCCCcEE----EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCCEEEEEe
Confidence 9986643 122235678999999999999999884 999999999999999999999999999999 889999999
Q ss_pred CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccc
Q psy18073 323 SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNAT 402 (639)
Q Consensus 323 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (639)
.||.|++||+++++.+..+...... ....+.++|.+. .+......
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--------------------------~l~~~~~d 213 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNP---------PVSFVKFSPNGK--------------------------YILAATLD 213 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCC---------CEEEEEECTTSS--------------------------EEEEEETT
T ss_pred CCCcEEEEECCCCceeeEEeccCCC---------ceEEEEECCCCC--------------------------EEEEEcCC
Confidence 9999999999987655332111000 000112222222 22211111
Q ss_pred cccc---cccccccccccCcccceeEE--eeC-CCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcc
Q psy18073 403 KLER---VFAKPFVANLDGHKDGISCL--AKH-PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVE 476 (639)
Q Consensus 403 ~~~~---~~~~~~~~~~~~h~~~v~~v--~~s-p~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~ 476 (639)
..++ ......+..+.+|...+.++ .++ +++ .+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++.
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 1222 22334456777887654433 344 556 8999999999999999999999999999999999999999998
Q ss_pred cccccccccccCcccccc
Q psy18073 477 TTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~ 494 (639)
.++.+...+....+.|..
T Consensus 293 ~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 293 IIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEEEEECTTTCCEEEEEC
T ss_pred ceEEEEccCCccEEEecC
Confidence 776543212223377753
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.2e-36 Score=325.89 Aligned_cols=335 Identities=15% Similarity=0.171 Sum_probs=240.8
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEE
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLS 233 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s 233 (639)
.+++|+ .+..+.++.+|.+.|++++|+|+++..|++|+.|++|++||..+++++.++.+|.+.|.+++|+|+|++|++
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las 207 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 207 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEE
Confidence 466777 466788899999999999999998447999999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEEeCCCCCCCcccc---eEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceee------------
Q psy18073 234 VGIDNTIKTWSSELSESDHIVP---LHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIR------------ 296 (639)
Q Consensus 234 ~s~Dg~i~iwd~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~------------ 296 (639)
|+.|++|++||+.+++....+. .....+...|.+++|+|++.++++++. +|++||+++++.+.
T Consensus 208 ~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~ 287 (611)
T 1nr0_A 208 TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ 287 (611)
T ss_dssp EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCE
T ss_pred EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcccee
Confidence 9999999999998765432111 000136679999999999999999884 99999998876543
Q ss_pred -------------------------------eeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccc
Q psy18073 297 -------------------------------AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYL 345 (639)
Q Consensus 297 -------------------------------~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 345 (639)
.+.+|...|.+++|+| ++++|++++.||+|++||+.++.....+....
T Consensus 288 ~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h 366 (611)
T 1nr0_A 288 LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVH 366 (611)
T ss_dssp EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSC
T ss_pred EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCC
Confidence 3457999999999999 89999999999999999999876644331110
Q ss_pred cccccccccccC-----------------------------------CCCCCCCCCCCc-----hhhhhhccc------c
Q psy18073 346 RETKTSIHRIPR-----------------------------------NIDPSLHPFEGP-----REYVRALNA------T 379 (639)
Q Consensus 346 ~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~-----~~~v~~~~~------~ 379 (639)
......+...+. ...+.++|++.. ...+..+.. .
T Consensus 367 ~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~ 446 (611)
T 1nr0_A 367 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVP 446 (611)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEE
T ss_pred cceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeee
Confidence 000000000000 000111111100 000000000 0
Q ss_pred ccceeeeeeeecCccceeeecccccccccccc-----ccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCc-c
Q psy18073 380 KLERVFAKPFVGPREYVRALNATKLERVFAKP-----FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-Q 453 (639)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~-~ 453 (639)
....+..+.++.++..+...+....++.|+.. .+.. .+|...|++|+|+|+| ++||+++.|++|++||+.+ +
T Consensus 447 ~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg-~~las~s~d~~v~~w~~~~~~ 524 (611)
T 1nr0_A 447 ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG-AFLVATDQSRKVIPYSVANNF 524 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS-SEEEEEETTSCEEEEEGGGTT
T ss_pred cCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCC-CEEEEEcCCCCEEEEEcCCCC
Confidence 11223445566666666555555555555421 1233 6899999999999999 9999999999999999988 6
Q ss_pred cccee--eeeeccccccccccCCcccccccccccccCc-cccccCC
Q psy18073 454 SCVQT--YQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQHD 496 (639)
Q Consensus 454 ~~~~~--l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~~d 496 (639)
+++.. +.+|.+.|++++|+|||+.++.+ +.|.. +.|....
T Consensus 525 ~~~~~~~~~~H~~~V~~v~fspdg~~lasg---s~D~~v~lW~~~~ 567 (611)
T 1nr0_A 525 ELAHTNSWTFHTAKVACVSWSPDNVRLATG---SLDNSVIVWNMNK 567 (611)
T ss_dssp EESCCCCCCCCSSCEEEEEECTTSSEEEEE---ETTSCEEEEETTC
T ss_pred ceeeeeeeeecccceeEEEECCCCCEEEEE---ECCCcEEEEECCC
Confidence 66654 44599999999999999877653 44544 8886543
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.3e-36 Score=298.44 Aligned_cols=237 Identities=22% Similarity=0.361 Sum_probs=205.9
Q ss_pred ccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC-----CceEEEEeccCCceEEEEEcCCCCEEEEEecCC
Q psy18073 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-----QSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDN 238 (639)
Q Consensus 164 ~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg 238 (639)
.+..+|.||.++|++++|+|+++++|+||+.|++|++||+.+ +.++..+.+|...|.+++|+|++++|++|+.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 355789999999999999997658999999999999999864 345778899999999999999999999999999
Q ss_pred eEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCC---
Q psy18073 239 TIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPI--- 313 (639)
Q Consensus 239 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~--- 313 (639)
+|++||+.+++.. .....+...|.+++++|++.++++++. .|++||++ ++++..+.+|...|.++.|+|.
T Consensus 88 ~v~~wd~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 88 TLRLWDVATGETY----QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEEEEETTTTEEE----EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC---
T ss_pred EEEEEECCCCCee----EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC
Confidence 9999999987643 222345678999999999999999985 99999996 5678889999999999999993
Q ss_pred --CCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeec
Q psy18073 314 --DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391 (639)
Q Consensus 314 --~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 391 (639)
++..+++++.|++|++||+++++..
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~----------------------------------------------------- 189 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIE----------------------------------------------------- 189 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEE-----------------------------------------------------
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhh-----------------------------------------------------
Confidence 2448999999999999999764332
Q ss_pred CccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccc
Q psy18073 392 PREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471 (639)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~ 471 (639)
..+.+|...|++++|+|+| .+|+||+.||+|++||+.+++++.++..+ ..|.+++|
T Consensus 190 ----------------------~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 245 (319)
T 3frx_A 190 ----------------------ADFIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF 245 (319)
T ss_dssp ----------------------EEECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE
T ss_pred ----------------------eeecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE
Confidence 4567899999999999999 99999999999999999999999999654 68999999
Q ss_pred cCCcccccccc
Q psy18073 472 RPAVETTDLTR 482 (639)
Q Consensus 472 spdg~~~~~~~ 482 (639)
+|++..++.+.
T Consensus 246 sp~~~~la~~~ 256 (319)
T 3frx_A 246 SPNRYWLAAAT 256 (319)
T ss_dssp CSSSSEEEEEE
T ss_pred cCCCCEEEEEc
Confidence 99998876553
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=304.45 Aligned_cols=304 Identities=15% Similarity=0.273 Sum_probs=229.1
Q ss_pred cccC-ccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccc---cccccccccEEEEEECCCCCeeEEEeeCCCcE
Q psy18073 123 ETKT-SIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV---ANLDGHKDGISCLAKHPTKLSTIISGAYDGEV 198 (639)
Q Consensus 123 ~~~~-~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i 198 (639)
.+.. .+..+.++++..++...+.+. .+++|++.++... ....+|.+.|++++|+|+| ++|++|+.|++|
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v 85 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG-NYLASASFDATT 85 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC-CEEEEEECCCcE
Confidence 3443 677777787777666555443 4788988766532 2247899999999999999 999999999999
Q ss_pred EEEeCCCC--ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCC
Q psy18073 199 KVWNLTSQ--SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSK 275 (639)
Q Consensus 199 ~vWd~~~~--~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 275 (639)
+|||+.++ +++..+.+|.+.|.+++|+|++++|++|+.|++|++||+.++..... ...+ .+...|.+++|+|++.
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~--~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC--VSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE--EEEECCCCSCEEEEEECSSSS
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE--EEEecCcCCCeEEEEECCCCC
Confidence 99998876 46788999999999999999999999999999999999987543211 1222 3456899999999999
Q ss_pred EEEEcCC--eeEEEeCCCCc--eeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccc
Q psy18073 276 IFATCGD--QCQLWEHERNE--PIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTS 351 (639)
Q Consensus 276 ~l~~~~~--~i~vwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 351 (639)
++++++. .|++||.++++ +...+.+|...|.+++|+| ++++|++|+.||+|++||...........
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~--------- 233 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVA--------- 233 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCC---------
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccce---------
Confidence 9999884 99999998875 4578899999999999999 89999999999999999975432111000
Q ss_pred cccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccC-cccceeEEeeCC
Q psy18073 352 IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG-HKDGISCLAKHP 430 (639)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp 430 (639)
.. +.. ....++..+.+ |...|.+++|+|
T Consensus 234 -----------~~--------------------------~~~--------------~~~~~~~~~~~~h~~~v~~v~~~~ 262 (345)
T 3fm0_A 234 -----------CS--------------------------GSD--------------PSWKCICTLSGFHSRTIYDIAWCQ 262 (345)
T ss_dssp -----------CC-------------------------------------------CEEEEEEEECSSCSSCEEEEEECT
T ss_pred -----------ee--------------------------ccC--------------CccceeEEecCCCCCcEEEEEEec
Confidence 00 000 00011133444 889999999999
Q ss_pred CCcceEEeccCCceEEEecCCccccc---------eeeeeeccccccccccCCcccccccccccccCc-cccccCChHH
Q psy18073 431 TKLSTIISGAYDGEVKVWNLTSQSCV---------QTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQHDIQE 499 (639)
Q Consensus 431 ~~~~~l~sgs~Dg~v~iWd~~~~~~~---------~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~~d~~e 499 (639)
++ ..|++++.|+.|++|+...+... ..+.+|...|++|+|+|++..+ .++.+.|+. +.|.....+.
T Consensus 263 ~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~--laS~s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 263 LT-GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGL--LASCSDDGEVAFWKYQRPEG 338 (345)
T ss_dssp TT-CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTE--EEEEETTSCEEEEEECC---
T ss_pred CC-CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceE--EEEcCCCCcEEEEEecCCCC
Confidence 99 89999999999999998765321 1235789999999999998522 223455554 8887655443
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-36 Score=299.03 Aligned_cols=292 Identities=15% Similarity=0.199 Sum_probs=214.0
Q ss_pred hhcccCccccccCCCCC-CCCCCCCchhHHHhhhhhhhhhhhc-----cccccccccccccEEEEEECCCCCeeEEEeeC
Q psy18073 121 LRETKTSIHRIPRNIDP-SLHPFEGPREYVRALNATKLERVFA-----KPFVANLDGHKDGISCLAKHPTKLSTIISGAY 194 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~ 194 (639)
+..|...|..+.+.++. ......+.+ ..+++|++.. +..+.++.+|...|.+++|+|+| .+|++|+.
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~ 85 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRD------KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG-AYALSASW 85 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETT------SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEET
T ss_pred EccccceEEEEEccCCCccEEEEecCC------ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC-CEEEEEeC
Confidence 45677777777666543 222222322 3578888754 34577899999999999999999 99999999
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCC-
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRK- 273 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 273 (639)
|++|+|||+.+++.+..+.+|.+.|.+++|+|++.+|++|+.|++|++||++.. .. .....+...+.++.++|.
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~----~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CL----ATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EE----EEECCCSSCEEEEEECCC-
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eE----EEEeccCCcEEEEEEccCC
Confidence 999999999999999999999999999999999999999999999999999742 21 222345568999999985
Q ss_pred -----CCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccc
Q psy18073 274 -----SKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346 (639)
Q Consensus 274 -----~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 346 (639)
+..+++++. .|++||+++++....+.+|...|.+++|+| ++++|++|+.||+|++||+++++.+..+....
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~- 238 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD- 238 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECCS-
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-
Confidence 447777774 999999999999999999999999999999 89999999999999999999887664432111
Q ss_pred ccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEE
Q psy18073 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCL 426 (639)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 426 (639)
....+.++|++. .++... .....+......................|...+.++
T Consensus 239 ----------~v~~~~~sp~~~---------------~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 292 (319)
T 3frx_A 239 ----------EVFSLAFSPNRY---------------WLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSL 292 (319)
T ss_dssp ----------CEEEEEECSSSS---------------EEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEE
T ss_pred ----------cEEEEEEcCCCC---------------EEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEE
Confidence 011233444332 111110 011111111111111111111112234567789999
Q ss_pred eeCCCCcceEEeccCCceEEEecCCcc
Q psy18073 427 AKHPTKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 427 ~~sp~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
+|+|+| ++|++|+.||+|+|||+.++
T Consensus 293 ~~spdg-~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 293 AWSADG-QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EECTTS-SEEEEEETTSCEEEEEEEEC
T ss_pred EECCCC-CEEEEeecCceEEEEEEeec
Confidence 999999 99999999999999998764
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.9e-36 Score=306.60 Aligned_cols=295 Identities=18% Similarity=0.246 Sum_probs=221.5
Q ss_pred hhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy18073 158 ERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID 237 (639)
Q Consensus 158 ~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D 237 (639)
|+.....+.++|.||.+.|++++|+|++ .+|+||+.||+|+|||+.+++....+.+|...|.+++|+|++++|++|+.|
T Consensus 51 ~~~~~~~~~~~l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 51 FNPTDLVCCRTLQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CCCCCCEEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred cccceeEEeecccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 4444456778899999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCC---cccceEEEecCCeeEEeeecCCC-CEEEEcCC--eeEEEeCCCCceeeee-----ecCCccEE
Q psy18073 238 NTIKTWSSELSESD---HIVPLHTIISKSVISSISHQRKS-KIFATCGD--QCQLWEHERNEPIRAF-----SWNVDSLH 306 (639)
Q Consensus 238 g~i~iwd~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~--~i~vwd~~~~~~~~~~-----~~h~~~v~ 306 (639)
+.|++||+.+.... .........+.+.+.++.|+|++ ..+++|+. .|++||+++++.+..+ .+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 99999999753211 00111122355688899999964 55777764 9999999999988877 67999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCc-cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceee
Q psy18073 307 HVQFNPIDKHILASCASDRSIILYDTRAT-VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF 385 (639)
Q Consensus 307 ~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 385 (639)
+++|+|.++++|++|+.||+|++||++.. ..+..+.. ... ....+.|+|++.
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~----h~~------~v~~v~~~p~~~----------------- 262 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG----HEG------DINSVKFFPDGQ----------------- 262 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC----CSS------CCCEEEECTTSS-----------------
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC----cCC------CeEEEEEecCCC-----------------
Confidence 99998868899999999999999999743 33221110 110 011123333322
Q ss_pred eeeeecCccceeeecccccccccc---ccccccccC-------cccceeEEeeCCCCcceEEeccCCceEEEecCCcccc
Q psy18073 386 AKPFVGPREYVRALNATKLERVFA---KPFVANLDG-------HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC 455 (639)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~ 455 (639)
.+...+.+..++.|+ +..+..+.. +...|++++|+|+| .+|++|+.||.|++||+.+++.
T Consensus 263 ---------~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 263 ---------RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ---------EEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE
T ss_pred ---------eEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce
Confidence 222222222222222 222222322 33458999999999 9999999999999999999998
Q ss_pred ceee----eeeccccccccccCCcccccccccccccCc-cccc
Q psy18073 456 VQTY----QAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQ 493 (639)
Q Consensus 456 ~~~l----~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~ 493 (639)
+..+ .+|.+.|++++|+|||..++. .++|.. +.|.
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s---gs~D~~i~iW~ 372 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALCT---GSWDKNLKIWA 372 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEEE---ECTTSCEEEEE
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEEE---eeCCCCEEEEe
Confidence 8877 689999999999999987653 456654 7775
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.2e-35 Score=290.19 Aligned_cols=250 Identities=13% Similarity=0.214 Sum_probs=202.1
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC--CceEEEEeccCCceEEEEEcC--CCCEEEEEecCCeEEE
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS--QSCVQTYQAHDGHVRDVCFLP--DGSQFLSVGIDNTIKT 242 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~--~~~~~~~~~h~~~V~~v~~sp--~~~~l~s~s~Dg~i~i 242 (639)
..+.+|.+.|++++|+|+| ++||||+.|++|+|||+.+ ++++.++.+|.++|.+++|+| ++++|+||+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4578999999999999999 9999999999999999974 467889999999999999986 4899999999999999
Q ss_pred EeCCCCCCCcccceEEE-ecCCeeEEeeecCC--CCEEEEcCC--eeEEEeCCCCc--eeeeeecCCccEEEEEEcCCC-
Q psy18073 243 WSSELSESDHIVPLHTI-ISKSVISSISHQRK--SKIFATCGD--QCQLWEHERNE--PIRAFSWNVDSLHHVQFNPID- 314 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~--~i~vwd~~~~~--~~~~~~~h~~~v~~v~~sp~~- 314 (639)
||++++.... .... .+...|.+++|+|+ +.++++++. .|++||++++. ....+.+|...|.+++|+|+.
T Consensus 82 Wd~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 82 WKEENGRWSQ---IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEBSSSCBCC---CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEcCCCceEE---EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 9998754211 2222 35678999999997 788888874 99999998764 246778999999999999942
Q ss_pred -----------CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccce
Q psy18073 315 -----------KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 383 (639)
Q Consensus 315 -----------~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 383 (639)
+++|++|+.||+|++||++++....
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~-------------------------------------------- 194 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-------------------------------------------- 194 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEE--------------------------------------------
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceE--------------------------------------------
Confidence 5799999999999999987643110
Q ss_pred eeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCC--cceEEeccCCceEEEecCCcccc---cee
Q psy18073 384 VFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTK--LSTIISGAYDGEVKVWNLTSQSC---VQT 458 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~~l~sgs~Dg~v~iWd~~~~~~---~~~ 458 (639)
.....+.+|.+.|.+++|+|++ ..+|||||.||+|+|||++++.. ...
T Consensus 195 ---------------------------~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~ 247 (297)
T 2pm7_B 195 ---------------------------VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL 247 (297)
T ss_dssp ---------------------------EEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE
T ss_pred ---------------------------EEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee
Confidence 0115578999999999999984 38999999999999999987531 122
Q ss_pred e--eeeccccccccccCCcccccccccccccC-cccccc
Q psy18073 459 Y--QAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 459 l--~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
+ .+|...|.+++|+|+|+.++.+. .+. .+.|..
T Consensus 248 ~~~~~~~~~v~~~~~s~~g~~las~~---~D~~v~lw~~ 283 (297)
T 2pm7_B 248 LKEEKFPDVLWRASWSLSGNVLALSG---GDNKVTLWKE 283 (297)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEE---TTSCEEEEEE
T ss_pred eecccCCCcEEEEEECCCCCEEEEEc---CCCcEEEEEE
Confidence 3 46788999999999998876543 333 377753
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-35 Score=296.80 Aligned_cols=281 Identities=18% Similarity=0.233 Sum_probs=220.8
Q ss_pred hhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEE
Q psy18073 120 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVK 199 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~ 199 (639)
.+..+...|..+.+.++.......+.+ ..+++|+..+++.+..+.+|...|.+++|+|+| .+|++|+.|+.|+
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~D------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~ 122 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQD------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICS 122 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEE
Confidence 456677888888877776655544443 358899999999999999999999999999999 9999999999999
Q ss_pred EEeCCCC----ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCC
Q psy18073 200 VWNLTSQ----SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKS 274 (639)
Q Consensus 200 vWd~~~~----~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 274 (639)
+||+.++ .....+.+|.+.|.++.|++++. +++++.|++|++||+.++... ..+ .+...|.+++|+|++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~-----~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT-----TTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE-----EEECCCSSCEEEEEECTTS
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE-----EEEcCCCCceEEEEECCCC
Confidence 9999875 45667889999999999998775 899999999999999986543 233 355789999999999
Q ss_pred CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccccccccc
Q psy18073 275 KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSI 352 (639)
Q Consensus 275 ~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 352 (639)
.++++|+. .|++||++++.++..+.+|...|.+++|+| ++++|++|+.||+|++||+++++.+..+.... ..
T Consensus 197 ~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~--~~--- 270 (340)
T 1got_B 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDN--II--- 270 (340)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTT--CC---
T ss_pred CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCC--cc---
Confidence 99999884 999999999999999999999999999999 89999999999999999999876543221100 00
Q ss_pred ccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccc---ccccccccccCcccceeEEeeC
Q psy18073 353 HRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERV---FAKPFVANLDGHKDGISCLAKH 429 (639)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~v~~s 429 (639)
.....+.++|.+. .+........++. .....+..+.+|.+.|.+++|+
T Consensus 271 ---~~v~~~~~s~~g~--------------------------~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s 321 (340)
T 1got_B 271 ---CGITSVSFSKSGR--------------------------LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321 (340)
T ss_dssp ---SCEEEEEECTTSS--------------------------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred ---cceEEEEECCCCC--------------------------EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEc
Confidence 0001122233222 2222222222222 2344557789999999999999
Q ss_pred CCCcceEEeccCCceEEEec
Q psy18073 430 PTKLSTIISGAYDGEVKVWN 449 (639)
Q Consensus 430 p~~~~~l~sgs~Dg~v~iWd 449 (639)
|+| .+|||||.||+|+|||
T Consensus 322 ~dg-~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 322 DDG-MAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTS-SCEEEEETTSCEEEEC
T ss_pred CCC-CEEEEEcCCccEEecC
Confidence 999 9999999999999997
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=293.87 Aligned_cols=269 Identities=16% Similarity=0.236 Sum_probs=201.3
Q ss_pred hhhhhhhhhcc--cccccc-cc-ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC-------CceEEEEeccCCceEE
Q psy18073 153 NATKLERVFAK--PFVANL-DG-HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-------QSCVQTYQAHDGHVRD 221 (639)
Q Consensus 153 ~~~~~~~~~~~--~~~~~l-~~-H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~-------~~~~~~~~~h~~~V~~ 221 (639)
..+++|++..+ ..+..+ .+ |.+.|++++|+|++ .+|++|+.|++|+|||+.. .+++..+.+|.+.|.+
T Consensus 34 ~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~ 112 (330)
T 2hes_X 34 RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKG 112 (330)
T ss_dssp SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEE
T ss_pred CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEE
Confidence 35788988764 345555 44 99999999999999 8999999999999999843 4567788999999999
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCC--ceee
Q psy18073 222 VCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFATCGD--QCQLWEHERN--EPIR 296 (639)
Q Consensus 222 v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~--~~~~ 296 (639)
++|+|++++|++|+.|++|++||+....... .....+ .+...|.+++|+|++.+|++++. .|++||..++ +++.
T Consensus 113 v~~sp~g~~las~s~D~~v~iwd~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 113 VAWSNDGYYLATCSRDKSVWIWETDESGEEY-ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA 191 (330)
T ss_dssp EEECTTSCEEEEEETTSCEEEEECCTTCCCC-EEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCEEEEEeccCCCCCe-EEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE
Confidence 9999999999999999999999996432211 112222 35568999999999999999984 9999999876 6788
Q ss_pred eeecCCccEEEEEEcCCC-CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 297 AFSWNVDSLHHVQFNPID-KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 297 ~~~~h~~~v~~v~~sp~~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
.+.+|.+.|.+++|+|++ +.+|++|+.|++|++||++.+......
T Consensus 192 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~---------------------------------- 237 (330)
T 2hes_X 192 VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ---------------------------------- 237 (330)
T ss_dssp EECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE----------------------------------
T ss_pred EccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc----------------------------------
Confidence 999999999999999932 678999999999999998754221000
Q ss_pred ccccccceeeeeeeecCccceeeeccccccccccccccccccC-cccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG-HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
.......+.+ |...|.+++|++++ +|++|+.||+|++||..+++
T Consensus 238 ---------------------------------~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 238 ---------------------------------EWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp ---------------------------------EEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTE
T ss_pred ---------------------------------eeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCc
Confidence 0000133344 89999999999765 89999999999999998774
Q ss_pred --ccee-eeeecc-ccccccccC--CcccccccccccccCc-cccccC
Q psy18073 455 --CVQT-YQAHDG-HVRDTSTRP--AVETTDLTRSFGWESS-DAWQQH 495 (639)
Q Consensus 455 --~~~~-l~~h~~-~v~~v~~sp--dg~~~~~~~~~~~~~~-~~~~~~ 495 (639)
.+.. +.+|.. .|.+++|+| ++..++.+ +.|+. +.|...
T Consensus 283 ~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~---s~Dg~v~~W~~~ 327 (330)
T 2hes_X 283 WKVFAKRALCHGVYEINVVKWLELNGKTILATG---GDDGIVNFWSLE 327 (330)
T ss_dssp EEEEEEESCTTTTSCEEEEEEC-----CCEEEE---ETTSEEEEEEC-
T ss_pred eEEEeccccccccceEEEEEEecCCCceEEEEe---cCCCcEEEEEec
Confidence 3333 357876 899999999 56655443 34443 777543
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.6e-35 Score=317.10 Aligned_cols=262 Identities=17% Similarity=0.256 Sum_probs=215.1
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC--ceEEEEeccCCceEEEEEcCCCCE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ--SCVQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~--~~~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
+.+++|++.++....++.+|.+.|++++|+|+| ++||||+.||+|+|||+.++ .....+.+|.++|.+++|+|++++
T Consensus 39 ~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~ 117 (611)
T 1nr0_A 39 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117 (611)
T ss_dssp TEEEEEETTCSSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred CEEEEecCCCcccCeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCE
Confidence 468899998888899999999999999999999 99999999999999999754 345678899999999999999999
Q ss_pred EEEEecC----CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCC-EEEEcCC--eeEEEeCCCCceeeeeecCCc
Q psy18073 231 FLSVGID----NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSK-IFATCGD--QCQLWEHERNEPIRAFSWNVD 303 (639)
Q Consensus 231 l~s~s~D----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~--~i~vwd~~~~~~~~~~~~h~~ 303 (639)
|++++.+ +.|++||.. .....+ ..+...|.+++|+|++. .+++++. .|++||..+++++..+.+|.+
T Consensus 118 l~~~~~~~~~~~~v~~wd~~--~~~~~l----~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~ 191 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDTG--TSNGNL----TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK 191 (611)
T ss_dssp EEEEECCSSCSEEEEETTTC--CBCBCC----CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS
T ss_pred EEEEECCCCceeEEEEeeCC--CCccee----cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC
Confidence 9999875 478999854 322221 23557899999999986 5787774 999999999999999999999
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccce
Q psy18073 304 SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 383 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 383 (639)
.|.+++|+| ++++|++|+.||+|++||+.+++....+..
T Consensus 192 ~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~---------------------------------------- 230 (611)
T 1nr0_A 192 FVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFED---------------------------------------- 230 (611)
T ss_dssp CEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBC----------------------------------------
T ss_pred ceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeecc----------------------------------------
Confidence 999999999 899999999999999999987655421100
Q ss_pred eeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccce------
Q psy18073 384 VFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ------ 457 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~------ 457 (639)
. .....+|.+.|.+++|+|+| .+|+|||.|++|++||+.+++++.
T Consensus 231 ---------------------------~-~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 231 ---------------------------D-SLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp ---------------------------T-TSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred ---------------------------c-cccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 0 01123799999999999999 999999999999999998776543
Q ss_pred -------------------------------------eeeeeccccccccccCCcccccccccccccCc-ccccc
Q psy18073 458 -------------------------------------TYQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQ 494 (639)
Q Consensus 458 -------------------------------------~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~ 494 (639)
.+.+|...|++++|+|||+.++.+. .+.. +.|..
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s---~D~~v~~Wd~ 353 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD---AEGHINSWDI 353 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEET
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe---CCCcEEEEEC
Confidence 3457889999999999998776443 3333 66753
No 22
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-35 Score=295.59 Aligned_cols=282 Identities=18% Similarity=0.257 Sum_probs=216.1
Q ss_pred hhcccCccccccC-----CC-CCCCCCCCCchhHHHhhhhhhhhhhhc-------cccccccccccccEEEEEECCCCCe
Q psy18073 121 LRETKTSIHRIPR-----NI-DPSLHPFEGPREYVRALNATKLERVFA-------KPFVANLDGHKDGISCLAKHPTKLS 187 (639)
Q Consensus 121 ~~~~~~~i~~~~~-----~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~l~~H~~~V~~l~~sp~~~~ 187 (639)
+..+...|..+.+ .. +.......+.+ ..+++|++.. +.....+.+|...|++++|+|++ .
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D------~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~ 89 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRD------KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-C 89 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETT------SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-T
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCC------CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-C
Confidence 4456666766654 22 22222222222 4588898764 34567789999999999999999 8
Q ss_pred eEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEE
Q psy18073 188 TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISS 267 (639)
Q Consensus 188 ~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 267 (639)
+|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++||+........ .....+...+.+
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~v~~ 167 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSS--AEKENHSDWVSC 167 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEEC--CTTTSCSSCEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeee--ecccCCCceeee
Confidence 999999999999999999999999999999999999999999999999999999999973211000 000124567999
Q ss_pred eeecCCC----------CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCc
Q psy18073 268 ISHQRKS----------KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT 335 (639)
Q Consensus 268 ~~~~~~~----------~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~ 335 (639)
++|+|++ .++++++. .|++|| ..++....+.+|...|.+++|+| ++++|++|+.||+|++||++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESSCC
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEECCCC
Confidence 9999987 67887774 999999 45677788999999999999999 8999999999999999998542
Q ss_pred cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccc
Q psy18073 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVAN 415 (639)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (639)
.... ..
T Consensus 246 ~~~~--------------------------------------------------------------------------~~ 251 (343)
T 2xzm_R 246 TYPQ--------------------------------------------------------------------------RE 251 (343)
T ss_dssp SSCS--------------------------------------------------------------------------EE
T ss_pred cccc--------------------------------------------------------------------------ee
Confidence 2110 11
Q ss_pred ccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccce--eee-----------eeccccccccccCCcccccccc
Q psy18073 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ--TYQ-----------AHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 416 ~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~--~l~-----------~h~~~v~~v~~spdg~~~~~~~ 482 (639)
+ .+...|.+++|+|++ .++++| .|+.|++||+.+++... .+. +|...|.+++|+|+|+.++.+.
T Consensus 252 ~-~~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 252 F-DAGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp E-ECSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred e-cCCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 1 234469999999999 777654 68889999998877654 443 6788899999999998876543
Q ss_pred cccccC-ccccc
Q psy18073 483 SFGWES-SDAWQ 493 (639)
Q Consensus 483 ~~~~~~-~~~~~ 493 (639)
.|+ .+.|.
T Consensus 329 ---~Dg~v~~w~ 337 (343)
T 2xzm_R 329 ---TDGVIRTFS 337 (343)
T ss_dssp ---TTSEEEEEE
T ss_pred ---CCceEEEEE
Confidence 333 26664
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=294.57 Aligned_cols=250 Identities=21% Similarity=0.385 Sum_probs=204.6
Q ss_pred ccccccccccc-cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEE--E-EeccCCceEEEEEcCCCCEEEEEecCCe
Q psy18073 164 PFVANLDGHKD-GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ--T-YQAHDGHVRDVCFLPDGSQFLSVGIDNT 239 (639)
Q Consensus 164 ~~~~~l~~H~~-~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~--~-~~~h~~~V~~v~~sp~~~~l~s~s~Dg~ 239 (639)
.++.++.+|.+ .|.+++|+|+| .+||+|+.||+|+|||+.++.... . ..+|.+.|.+++|+|++++|++|+.|++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 46778899998 99999999999 999999999999999998876432 2 3689999999999999999999999999
Q ss_pred EEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCc---eeeeeecCCccEEEEEEcCC
Q psy18073 240 IKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFATCGD--QCQLWEHERNE---PIRAFSWNVDSLHHVQFNPI 313 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~---~~~~~~~h~~~v~~v~~sp~ 313 (639)
|++||+..+... ....+ .+...|.+++|+|++.+|++++. .|++||++++. ++..+.+|...|.+++|+|
T Consensus 85 v~iw~~~~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p- 160 (345)
T 3fm0_A 85 TCIWKKNQDDFE---CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP- 160 (345)
T ss_dssp EEEEEECCC-EE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-
T ss_pred EEEEEccCCCeE---EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-
Confidence 999998865321 12223 35578999999999999999984 99999998764 4667889999999999999
Q ss_pred CCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCc
Q psy18073 314 DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPR 393 (639)
Q Consensus 314 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 393 (639)
++.+|++|+.|++|++||.+++...
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~------------------------------------------------------- 185 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWV------------------------------------------------------- 185 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEE-------------------------------------------------------
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEE-------------------------------------------------------
Confidence 8899999999999999998654221
Q ss_pred cceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcc---------------cccee
Q psy18073 394 EYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ---------------SCVQT 458 (639)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~---------------~~~~~ 458 (639)
....+.+|...|++++|+|+| .+|+|||.||+|++||.... +++.+
T Consensus 186 ------------------~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (345)
T 3fm0_A 186 ------------------CCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICT 246 (345)
T ss_dssp ------------------EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEE
T ss_pred ------------------EEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEE
Confidence 014567899999999999999 99999999999999996322 33445
Q ss_pred eee-eccccccccccCCcccccccccccccCcccccc
Q psy18073 459 YQA-HDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 459 l~~-h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~ 494 (639)
+.+ |...|.+++|+|++..++.+. +....+.|..
T Consensus 247 ~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~i~vw~~ 281 (345)
T 3fm0_A 247 LSGFHSRTIYDIAWCQLTGALATAC--GDDAIRVFQE 281 (345)
T ss_dssp ECSSCSSCEEEEEECTTTCCEEEEE--TTSCEEEEEE
T ss_pred ecCCCCCcEEEEEEecCCCEEEEEe--CCCeEEEEEe
Confidence 554 888999999999998766543 2233477753
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-34 Score=292.16 Aligned_cols=221 Identities=21% Similarity=0.312 Sum_probs=183.4
Q ss_pred hhhhhhhhhccccccc----cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCC
Q psy18073 153 NATKLERVFAKPFVAN----LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~----l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~ 228 (639)
+.+++||+.+++.+.. ..+|.+.|++++|+|+| ++|++|+.||+|++||+.+++++..+.+|.+.|++++|+|++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 4689999988765533 34899999999999999 999999999999999999999999999999999999999987
Q ss_pred C-EEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC-CEEEEcCC--eeEEEeCCCCceeeeeecCCcc
Q psy18073 229 S-QFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS-KIFATCGD--QCQLWEHERNEPIRAFSWNVDS 304 (639)
Q Consensus 229 ~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~ 304 (639)
. ++++++.||+|++||+++++....... ..+...+.+++|+|++ .++++|+. .|++||+++++++..+.+|...
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDF--CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCC--TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred CceeeeeccCCceEEEECCCCceeeeeee--ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 4 789999999999999998765433222 1234678999999974 67777763 8999999999999999999999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccccee
Q psy18073 305 LHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERV 384 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 384 (639)
|.+++|+|+++++||+|+.||+|+|||+++++++
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~---------------------------------------------- 305 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF---------------------------------------------- 305 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE----------------------------------------------
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe----------------------------------------------
Confidence 9999999965678999999999999999876542
Q ss_pred eeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCC-CCcceEEeccCCceEEEecCCcc
Q psy18073 385 FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
...+|.+.|++|+|+| ++ .+|||||.||+|++||+.+.
T Consensus 306 ------------------------------~~~~H~~~V~~vafsP~d~-~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 ------------------------------RDLSHRDFVTGVAWSPLDH-SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ------------------------------EECCCSSCEEEEEECSSST-TEEEEEETTSCEEEEECC--
T ss_pred ------------------------------EECCCCCCEEEEEEeCCCC-CEEEEEcCCCeEEEEECCCC
Confidence 1247999999999999 66 89999999999999999764
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=286.50 Aligned_cols=250 Identities=20% Similarity=0.333 Sum_probs=196.7
Q ss_pred cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC--ceEEEE-ec-cCCceEEEEEcCCCCEEEEEecCC
Q psy18073 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ--SCVQTY-QA-HDGHVRDVCFLPDGSQFLSVGIDN 238 (639)
Q Consensus 163 ~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~--~~~~~~-~~-h~~~V~~v~~sp~~~~l~s~s~Dg 238 (639)
.++++++.+|+++|.+++|+|+ +||+|+.||+|++||+.++ ..+..+ .+ |.+.|.+++|+|++++|++|+.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 4567889999999999999986 8999999999999999875 455566 44 999999999999999999999999
Q ss_pred eEEEEeCCCCCCC--cccceEEE-ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCC----ceeeeeecCCccEEEEE
Q psy18073 239 TIKTWSSELSESD--HIVPLHTI-ISKSVISSISHQRKSKIFATCGD--QCQLWEHERN----EPIRAFSWNVDSLHHVQ 309 (639)
Q Consensus 239 ~i~iwd~~~~~~~--~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~----~~~~~~~~h~~~v~~v~ 309 (639)
+|++||+...... .......+ .+...|.+++|+|++.+|++++. .|++||++.. +++..+.+|...|.+++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 9999999643211 01112222 35568999999999999999984 9999999432 46778899999999999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeee
Q psy18073 310 FNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPF 389 (639)
Q Consensus 310 ~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 389 (639)
|+| ++.+|++|+.||+|++||..++..
T Consensus 161 ~~p-~~~~l~s~s~D~~i~iW~~~~~~~---------------------------------------------------- 187 (330)
T 2hes_X 161 WHP-SEALLASSSYDDTVRIWKDYDDDW---------------------------------------------------- 187 (330)
T ss_dssp ECS-SSSEEEEEETTSCEEEEEEETTEE----------------------------------------------------
T ss_pred ECC-CCCEEEEEcCCCeEEEEECCCCCe----------------------------------------------------
Confidence 999 889999999999999999764310
Q ss_pred ecCccceeeeccccccccccccccccccCcccceeEEeeCCC--CcceEEeccCCceEEEecCCcc--------ccceee
Q psy18073 390 VGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPT--KLSTIISGAYDGEVKVWNLTSQ--------SCVQTY 459 (639)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~~l~sgs~Dg~v~iWd~~~~--------~~~~~l 459 (639)
.++..+.+|.+.|.+++|+|+ + .+|+||+.|++|++||+.++ .++..+
T Consensus 188 ---------------------~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~ 245 (330)
T 2hes_X 188 ---------------------ECVAVLNGHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAIL 245 (330)
T ss_dssp ---------------------EEEEEECCCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred ---------------------eEEEEccCCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEecCCCccccceeEEeeec
Confidence 012567899999999999998 5 68999999999999999776 345555
Q ss_pred ee-eccccccccccCCcccccccccccccCc-ccccc
Q psy18073 460 QA-HDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQ 494 (639)
Q Consensus 460 ~~-h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~ 494 (639)
.+ |...|.+++|+|++ .++ +.+.++. +.|..
T Consensus 246 ~~~h~~~v~~v~~s~~~-~l~---s~~~dg~v~iw~~ 278 (330)
T 2hes_X 246 PDVHKRQVYNVAWGFNG-LIA---SVGADGVLAVYEE 278 (330)
T ss_dssp CSCCSSCEEEEEECTTS-CEE---EEETTSCEEEEEE
T ss_pred ccccccceEEEEEcCCC-EEE---EEeCCCEEEEEEc
Confidence 54 89999999999876 322 3344543 77853
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.1e-34 Score=285.28 Aligned_cols=242 Identities=16% Similarity=0.287 Sum_probs=197.3
Q ss_pred ccccccccccccEEEEEE-----CC-CCCeeEEEeeCCCcEEEEeCCCC-------ceEEEEeccCCceEEEEEcCCCCE
Q psy18073 164 PFVANLDGHKDGISCLAK-----HP-TKLSTIISGAYDGEVKVWNLTSQ-------SCVQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 164 ~~~~~l~~H~~~V~~l~~-----sp-~~~~~l~sgs~dg~i~vWd~~~~-------~~~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
.+..+|.||++.|++++| ++ ++ .+|+||+.|++|+|||+.++ .+...+.+|...|.+++|+|++.+
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 356789999999999999 77 77 89999999999999998743 466788999999999999999999
Q ss_pred EEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeee---ecCCccE
Q psy18073 231 FLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAF---SWNVDSL 305 (639)
Q Consensus 231 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~---~~h~~~v 305 (639)
+++|+.|++|++||+++++.. .....+...|.+++|+|++.++++++. .|++||+... ..... .+|...|
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~----~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTY----KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWV 165 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEE----EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCE
T ss_pred EEEEcCCCcEEEEECCCCcEE----EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCcee
Confidence 999999999999999987643 222345679999999999999999874 9999999843 33333 3788999
Q ss_pred EEEEEcCCCC----------cEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 306 HHVQFNPIDK----------HILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 306 ~~v~~sp~~~----------~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
.+++|+| ++ .+|++++.||+|++||... ..
T Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~-------------------------------------- 205 (343)
T 2xzm_R 166 SCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QI-------------------------------------- 205 (343)
T ss_dssp EEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EE--------------------------------------
T ss_pred eeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCC-ce--------------------------------------
Confidence 9999999 44 7899999999999999421 11
Q ss_pred ccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCc-cc
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-QS 454 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~-~~ 454 (639)
...+.+|...|++++|+|+| .+|+||+.||+|++||+.+ +.
T Consensus 206 -------------------------------------~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 206 -------------------------------------RYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp -------------------------------------EEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESSCCSS
T ss_pred -------------------------------------eEEEcCccccceEEEECCCC-CEEEEEcCCCeEEEEECCCCcc
Confidence 14467899999999999999 9999999999999999954 44
Q ss_pred cceeeeeeccccccccccCCcccccccccccccCccccc
Q psy18073 455 CVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQ 493 (639)
Q Consensus 455 ~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~ 493 (639)
....+ .+...|.+++|+|++..++.+. ....+.|.
T Consensus 248 ~~~~~-~~~~~v~~v~~sp~~~~la~~~---d~~v~iw~ 282 (343)
T 2xzm_R 248 PQREF-DAGSTINQIAFNPKLQWVAVGT---DQGVKIFN 282 (343)
T ss_dssp CSEEE-ECSSCEEEEEECSSSCEEEEEE---SSCEEEEE
T ss_pred cceee-cCCCcEEEEEECCCCCEEEEEC---CCCEEEEE
Confidence 44444 4567899999999997765332 22346775
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.5e-34 Score=288.86 Aligned_cols=283 Identities=17% Similarity=0.189 Sum_probs=219.9
Q ss_pred hhhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcE
Q psy18073 119 EYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEV 198 (639)
Q Consensus 119 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i 198 (639)
..+..+...|..+.+.++.......+.+ ..+++||..+++....+..|...|.+++|+|+| .+|++|+.|+.+
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~D------g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i 130 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQD------GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKC 130 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEE
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCC------CeEEEEECCCCCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCE
Confidence 3466788888888888777655544444 358899999999899999999999999999999 999999999999
Q ss_pred EEEeCCCC------ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeec
Q psy18073 199 KVWNLTSQ------SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQ 271 (639)
Q Consensus 199 ~vWd~~~~------~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~ 271 (639)
++|++... .....+.+|.+.|.+++|+|++..|++++.|++|++||+++++.. ..+ .+...|.+++++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~-----~~~~~h~~~v~~~~~~ 205 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL-----QSFHGHGADVLCLDLA 205 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-----EEEECCSSCEEEEEEC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE-----EEEcCCCCCeEEEEEE
Confidence 99998643 345677889999999999999999999999999999999987653 333 345688899887
Q ss_pred C--CCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccc
Q psy18073 272 R--KSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRE 347 (639)
Q Consensus 272 ~--~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~ 347 (639)
| ++.++++|+. .|++||+++++++..+.+|...|.+++|+| ++.+|++|+.|++|++||++++..+..+.....
T Consensus 206 ~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~- 283 (354)
T 2pbi_B 206 PSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESI- 283 (354)
T ss_dssp CCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC-
T ss_pred eCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc-
Confidence 7 5688888874 999999999999999999999999999999 889999999999999999988654322110000
Q ss_pred cccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccc---ccccccccccCccccee
Q psy18073 348 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERV---FAKPFVANLDGHKDGIS 424 (639)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~ 424 (639)
. .....+.++|.+ ..+........++. ..+..+..+.+|.+.|+
T Consensus 284 -~------~~~~~~~~s~~g--------------------------~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~ 330 (354)
T 2pbi_B 284 -I------FGASSVDFSLSG--------------------------RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVS 330 (354)
T ss_dssp -C------SCEEEEEECTTS--------------------------SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEE
T ss_pred -c------cceeEEEEeCCC--------------------------CEEEEEECCCcEEEEECCCCceEEEEECCCCcEE
Confidence 0 000011222222 22222222222222 23445577889999999
Q ss_pred EEeeCCCCcceEEeccCCceEEEec
Q psy18073 425 CLAKHPTKLSTIISGAYDGEVKVWN 449 (639)
Q Consensus 425 ~v~~sp~~~~~l~sgs~Dg~v~iWd 449 (639)
+++|+|+| .+|+|||.||+|++|+
T Consensus 331 ~l~~spdg-~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDG-TAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTS-SCEEEEETTSEEEEEC
T ss_pred EEEECCCC-CEEEEEcCCCCEEecC
Confidence 99999999 9999999999999996
No 28
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.5e-35 Score=288.30 Aligned_cols=248 Identities=18% Similarity=0.208 Sum_probs=195.6
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc--eEEEEeccCCceEEEEEcC--CCCEEEEEecCCeEEE
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLP--DGSQFLSVGIDNTIKT 242 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp--~~~~l~s~s~Dg~i~i 242 (639)
..+.+|.+.|++++|+|+| ++||||+.|++|+|||+.++. .+..+.+|.+.|.+++|+| ++++|+||+.|++|++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred eecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 3467999999999999999 999999999999999998775 5678899999999999986 4899999999999999
Q ss_pred EeCCCCCCCcccceEEE-ecCCeeEEeeecCC--CCEEEEcCC--eeEEEeCCCCce---eeeeecCCccEEEEEEcCCC
Q psy18073 243 WSSELSESDHIVPLHTI-ISKSVISSISHQRK--SKIFATCGD--QCQLWEHERNEP---IRAFSWNVDSLHHVQFNPID 314 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~--~i~vwd~~~~~~---~~~~~~h~~~v~~v~~sp~~ 314 (639)
||++++.... ...+ .+...|.+++|+|+ +.++++++. .|++||++.+.. ...+.+|...|.+++|+|+.
T Consensus 86 Wd~~~~~~~~---~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 86 WREENGTWEK---SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp ECCSSSCCCE---EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EECCCCcceE---EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 9998754221 2222 35668999999998 788888884 999999987632 45667899999999999941
Q ss_pred ----------------CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccc
Q psy18073 315 ----------------KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNA 378 (639)
Q Consensus 315 ----------------~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 378 (639)
+.+|++|+.|++|++||++.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~---------------------------------------- 202 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW---------------------------------------- 202 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE----------------------------------------
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc----------------------------------------
Confidence 468999999999999998643110
Q ss_pred cccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCC---cceEEeccCCceEEEecCCccc-
Q psy18073 379 TKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTK---LSTIISGAYDGEVKVWNLTSQS- 454 (639)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~---~~~l~sgs~Dg~v~iWd~~~~~- 454 (639)
..+..+.+|.+.|.+++|+|++ ..+|||||.||+|++||+.++.
T Consensus 203 --------------------------------~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 203 --------------------------------KEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS 250 (316)
T ss_dssp --------------------------------EEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred --------------------------------ceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence 0015568899999999999985 2689999999999999987632
Q ss_pred ---cceeeeeeccccccccccCCcccccccccccccC-ccccc
Q psy18073 455 ---CVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 455 ---~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~ 493 (639)
....+..|.+.|.+++|+|+|..++.+. .|. .+.|.
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~---~D~~v~lw~ 290 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSG---GDNKVTLWK 290 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEE---SSSCEEEEE
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEc---CCCeEEEEE
Confidence 2345678899999999999998776543 343 37775
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.7e-34 Score=306.62 Aligned_cols=288 Identities=23% Similarity=0.375 Sum_probs=225.2
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
..+++|+. .++.+..+.+|...|.+++|+|++ .+|++++.||+|++||.. +..+..+.+|...|.+++|+|++++|+
T Consensus 284 ~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~ 360 (577)
T 2ymu_A 284 KTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIA 360 (577)
T ss_dssp SCEEEEET-TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CEEEEEeC-CCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 35788885 466778899999999999999999 899999999999999975 456677889999999999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQF 310 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 310 (639)
+++.||+|++||... +.. .....+...|.+++|+|++.++++++. .|++||. +++.+..+.+|...|.+++|
T Consensus 361 ~~~~dg~v~~~~~~~-~~~----~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~ 434 (577)
T 2ymu_A 361 SASDDKTVKLWNRNG-QLL----QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAF 434 (577)
T ss_dssp EEETTSEEEEEETTC-CEE----EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEE
T ss_pred EEeCCCEEEEEcCCC-CEE----EEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEE
Confidence 999999999999643 221 222335678999999999999998874 8999995 57888999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
+| ++++|++++.|++|++||.. ++.+..+. ... ..+..+.++
T Consensus 435 s~-d~~~l~~~~~d~~v~~w~~~-~~~~~~~~----~~~--------------------------------~~v~~~~~s 476 (577)
T 2ymu_A 435 SP-DDQTIASASDDKTVKLWNRN-GQLLQTLT----GHS--------------------------------SSVRGVAFS 476 (577)
T ss_dssp CT-TSSEEEEEETTSEEEEEETT-SCEEEEEE----CCS--------------------------------SCEEEEEEC
T ss_pred CC-CCCEEEEEcCCCEEEEEECC-CCEEEEEc----CCC--------------------------------CCEEEEEEc
Confidence 99 88999999999999999964 33322111 011 111112222
Q ss_pred cCccceeeeccccccccc--cccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccc
Q psy18073 391 GPREYVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD 468 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~ 468 (639)
.++..+........++.| ++..+..+.+|...|++++|+|+| ++||+|+.||.|++||. +++++.++.+|.+.|++
T Consensus 477 pd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~ 554 (577)
T 2ymu_A 477 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 554 (577)
T ss_dssp TTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCC-CEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEE
Confidence 222222222222222222 345568889999999999999999 99999999999999995 78999999999999999
Q ss_pred ccccCCcccccccccccccCc-ccc
Q psy18073 469 TSTRPAVETTDLTRSFGWESS-DAW 492 (639)
Q Consensus 469 v~~spdg~~~~~~~~~~~~~~-~~~ 492 (639)
++|+|||+.++. .+.|.. +.|
T Consensus 555 ~~fs~dg~~l~s---~~~D~~i~~W 576 (577)
T 2ymu_A 555 VAFSPDGQTIAS---ASSDKTVKLW 576 (577)
T ss_dssp EEECTTSSCEEE---EETTSCEEEE
T ss_pred EEEcCCCCEEEE---EeCCCEEEEe
Confidence 999999987653 344543 666
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.2e-35 Score=296.78 Aligned_cols=297 Identities=16% Similarity=0.269 Sum_probs=220.7
Q ss_pred hhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEE
Q psy18073 120 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVK 199 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~ 199 (639)
.+..|...|..+.+.++.......+.+ ..+++||..+++.+..+.+|...|.+++|+|+| .+|++|+.|+.|+
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v~ 133 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQD------GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSACS 133 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECCCTTCCCCEECTTS-SEEEECCSSSCCE
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCccceEEecCCCCEEEEEECCCC-CEEEEeeCCCcEE
Confidence 356778888888888877665554444 358999999999999999999999999999999 9999999999999
Q ss_pred EEeCCCCc-------eEEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEeCCCCCCCcccceEE-EecCCeeEEeee
Q psy18073 200 VWNLTSQS-------CVQTYQAHDGHVRDVCFLPD-GSQFLSVGIDNTIKTWSSELSESDHIVPLHT-IISKSVISSISH 270 (639)
Q Consensus 200 vWd~~~~~-------~~~~~~~h~~~V~~v~~sp~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~ 270 (639)
+||+.+.. ....+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.++.....+.... ..+...+.++++
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 99986532 34567899999999999996 5679999999999999999876532111100 124568999999
Q ss_pred cC-CCCEEEEcCC--eeEEEeCC-CCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccc
Q psy18073 271 QR-KSKIFATCGD--QCQLWEHE-RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346 (639)
Q Consensus 271 ~~-~~~~l~~~~~--~i~vwd~~-~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 346 (639)
++ ++.++++|+. .|++||++ .++.+..+.+|.+.|.+++|+| ++.+|++|+.||+|++||++++..+..+.....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEeccccc
Confidence 87 7889998884 99999998 5578889999999999999999 899999999999999999999876543321110
Q ss_pred ccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc---ccccccc----cCc
Q psy18073 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA---KPFVANL----DGH 419 (639)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~h 419 (639)
... ...+....+.|+|.+. . .+++.. ...+..|+ ...+..+ .+|
T Consensus 293 ~~~---~~~~~v~~~~~s~~g~---------------~---l~~g~~--------dg~i~vwd~~~~~~~~~~~~~~~~h 343 (380)
T 3iz6_a 293 RND---NELPIVTSVAFSISGR---------------L---LFAGYS--------NGDCYVWDTLLAEMVLNLGTLQNSH 343 (380)
T ss_dssp SSC---CSSCSCSEEEECSSSS---------------E---EEEECT--------TSCEEEEETTTCCEEEEECCSCSSC
T ss_pred ccc---cccCceEEEEECCCCC---------------E---EEEEEC--------CCCEEEEECCCCceEEEEecccCCC
Confidence 000 0000111122333322 2 122222 22222221 2222223 689
Q ss_pred ccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
.+.|++++|+|+| .+|+|||.||+|++|++..++
T Consensus 344 ~~~v~~l~~s~dg-~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 344 EGRISCLGLSSDG-SALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CCCCCEEEECSSS-SEEEEECTTSCEEEEECCSSS
T ss_pred CCceEEEEECCCC-CEEEEeeCCCCEEEEecCCCc
Confidence 9999999999999 999999999999999987654
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.2e-33 Score=277.15 Aligned_cols=287 Identities=19% Similarity=0.335 Sum_probs=219.8
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+..+...|..+.+.++.......+.+ ..+++|+..+++....+.+|...|.+++|+|++ ++|++|+.||.|++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~v 91 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKI 91 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCC------CeEEEEeCCCcccchhhccCCCceEEEEEcCCC-CEEEEECCCCEEEE
Confidence 34566677777777766554443333 357899999999999999999999999999999 99999999999999
Q ss_pred EeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEE
Q psy18073 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFAT 279 (639)
Q Consensus 201 Wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~ 279 (639)
||+.+++++..+.+|...|.+++|+|++++|++|+.||+|++||+++++.. ..+ .+...+.+++|+|++.++++
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL-----KTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE-----EEecCCCCcEEEEEEcCCCCEEEE
Confidence 999999999999999999999999999999999999999999999986543 222 34568999999999999998
Q ss_pred cCC--eeEEEeCCCCceeeeee-cCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccccccccccccc
Q psy18073 280 CGD--QCQLWEHERNEPIRAFS-WNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIP 356 (639)
Q Consensus 280 ~~~--~i~vwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (639)
++. .|++||+++++.+..+. .+...+..++|+| ++++|++++.||.|++||+++++.+..+........ .
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~-- 239 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY----C-- 239 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSS----C--
T ss_pred EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceE----E--
Confidence 874 99999999998887764 4667899999999 889999999999999999998876543321110000 0
Q ss_pred CCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceE
Q psy18073 357 RNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI 436 (639)
Q Consensus 357 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l 436 (639)
....+.+.+ +. ...+++.+..+ ..|.......+..+.+|.+.|.+++|+|++ .++
T Consensus 240 --~~~~~~~~~--------------~~---~l~sg~~dg~i-----~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l 294 (312)
T 4ery_A 240 --IFANFSVTG--------------GK---WIVSGSEDNLV-----YIWNLQTKEIVQKLQGHTDVVISTACHPTE-NII 294 (312)
T ss_dssp --CCEEEECSS--------------SC---EEEECCTTSCE-----EEEETTTCCEEEEECCCSSCEEEEEECSSS-SEE
T ss_pred --EEEEEEeCC--------------Cc---EEEEECCCCEE-----EEEECCCchhhhhhhccCCcEEEEeecCcC-Cce
Confidence 000000000 00 11222222111 112223345567889999999999999999 899
Q ss_pred Eecc--CCceEEEecCC
Q psy18073 437 ISGA--YDGEVKVWNLT 451 (639)
Q Consensus 437 ~sgs--~Dg~v~iWd~~ 451 (639)
++++ .||+|++|+..
T Consensus 295 ~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 295 ASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECTTTCCEEEEECC
T ss_pred EEEEccCCccEEEecCC
Confidence 9886 69999999864
No 32
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-34 Score=298.97 Aligned_cols=179 Identities=10% Similarity=0.061 Sum_probs=149.0
Q ss_pred hhhhhhhhhccccc----cccccccccEEEEEECCC------CCeeEEEeeCCCcEEEEeCCCCce-----------EEE
Q psy18073 153 NATKLERVFAKPFV----ANLDGHKDGISCLAKHPT------KLSTIISGAYDGEVKVWNLTSQSC-----------VQT 211 (639)
Q Consensus 153 ~~~~~~~~~~~~~~----~~l~~H~~~V~~l~~sp~------~~~~l~sgs~dg~i~vWd~~~~~~-----------~~~ 211 (639)
+.+++|++.++++. .++.+|.+.|.+++|+|+ + .+||+|+.||+|+|||+.++.. ...
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~-~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~ 261 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLV-GCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT 261 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSS-CEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCC-ceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence 46899998776642 456788999999999997 4 6999999999999999987642 346
Q ss_pred EeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceE-EEecCCeeEEe--eecCCC-CEEEEcCC--eeE
Q psy18073 212 YQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLH-TIISKSVISSI--SHQRKS-KIFATCGD--QCQ 285 (639)
Q Consensus 212 ~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~~--~~~~~~-~~l~~~~~--~i~ 285 (639)
+.+|.+.|++++|+|++ .|++|+.||+|++||++++... .. ...+...|.++ +++|++ .+|++++. +|+
T Consensus 262 l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~----~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 262 LSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP----SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp ECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC----SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred EEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc----eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 78999999999999864 8999999999999999875432 22 23456789998 678888 88898884 999
Q ss_pred EEeCCCCceeeeeecCCc--cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 286 LWEHERNEPIRAFSWNVD--SLHHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 286 vwd~~~~~~~~~~~~h~~--~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
|||+++++++..+.+|.. .|.+++|+| ++..+++++.|++|++||++++.++
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEECCCCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccc
Confidence 999999998888888864 588999999 7888999999999999999886554
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.7e-33 Score=301.70 Aligned_cols=289 Identities=24% Similarity=0.393 Sum_probs=226.7
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
..+++|+. .++.+..+.+|...|++++|+|++ ..|++++.|+.|++||. +++.+..+.+|.+.|.+++|+|+++.|+
T Consensus 243 ~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 319 (577)
T 2ymu_A 243 KTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIA 319 (577)
T ss_dssp SCEEEECT-TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEE
Confidence 34788885 467788899999999999999999 89999999999999996 5678888999999999999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQF 310 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 310 (639)
+++.|++|++||+..... .....+...+.+++++|++..+++++. .+++||. +++.+..+.+|...|.+++|
T Consensus 320 t~~~d~~i~~w~~~~~~~-----~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~ 393 (577)
T 2ymu_A 320 SASDDKTVKLWNRNGQHL-----QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF 393 (577)
T ss_dssp EEETTSCEEEEETTSCEE-----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEE
T ss_pred EEeCCCeEEEEeCCCCee-----EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEE
Confidence 999999999999875321 122234568999999999999999875 8999995 57888999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
+| ++++|++++.|+.|++||.. ++.+..+. ... ..+..+.+.
T Consensus 394 s~-dg~~l~~~~~d~~v~~~~~~-~~~~~~~~----~~~--------------------------------~~v~~~~~s 435 (577)
T 2ymu_A 394 SP-DGQTIASASDDKTVKLWNRN-GQLLQTLT----GHS--------------------------------SSVWGVAFS 435 (577)
T ss_dssp CT-TSSCEEEEETTSEEEEECTT-CCEEEEEE----CCS--------------------------------SCEEEEEEC
T ss_pred CC-CCCEEEEEeCCCEEEEEeCC-CCEEEEec----CCC--------------------------------CCeEEEEEC
Confidence 99 89999999999999999953 33322211 111 011112222
Q ss_pred cCccceeeeccccccccc--cccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccc
Q psy18073 391 GPREYVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD 468 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~ 468 (639)
.++..+........+..| +...+..+.+|...|++++|+|++ ++||+|+.|++|++||. +++++.++.+|.+.|++
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~ 513 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRG 513 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTS-CEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEE
Confidence 222222222222222222 344557788999999999999999 99999999999999994 78999999999999999
Q ss_pred ccccCCcccccccccccccC-ccccc
Q psy18073 469 TSTRPAVETTDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 469 v~~spdg~~~~~~~~~~~~~-~~~~~ 493 (639)
++|+|||+.++.+. .+. .+.|.
T Consensus 514 l~~s~dg~~l~s~~---~dg~v~lwd 536 (577)
T 2ymu_A 514 VAFSPDGQTIASAS---DDKTVKLWN 536 (577)
T ss_dssp EEECTTSSCEEEEE---TTSEEEEEC
T ss_pred EEEcCCCCEEEEEE---CcCEEEEEe
Confidence 99999998876543 343 37774
No 34
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=280.83 Aligned_cols=291 Identities=15% Similarity=0.261 Sum_probs=216.8
Q ss_pred hhhhccccccccccccccEEEEEECCC---CCeeEEEeeCCCcEEEEeCCC-CceE-EEEeccCCceEEEEEcCCCCEEE
Q psy18073 158 ERVFAKPFVANLDGHKDGISCLAKHPT---KLSTIISGAYDGEVKVWNLTS-QSCV-QTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 158 ~~~~~~~~~~~l~~H~~~V~~l~~sp~---~~~~l~sgs~dg~i~vWd~~~-~~~~-~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
|+..+.+.+..+.+|.+.|++++|+|+ | .+|++|+.||.|+|||+.+ +..+ ..+.+|.+.|++++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPG-NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSS-EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCc-eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 344445567788999999999999999 6 8999999999999999987 5554 77889999999999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeee--cCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISH--QRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHV 308 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v 308 (639)
+++.||.|++||+.++.. .....+...|.+++| +|++.++++++. .|++||+++++++..+..|. .+.++
T Consensus 103 s~~~dg~v~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~ 176 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQA-----IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCA 176 (368)
T ss_dssp EEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEE
T ss_pred EEcCCCcEEEEEcCCCCc-----eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEE
Confidence 999999999999997653 344567789999999 899998888874 99999999999999998775 66677
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCcccc-----CCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccce
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRATVLS-----RNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 383 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 383 (639)
.+.+ ..+++++.|+.+++||++..... ........... +.+.... ...
T Consensus 177 ~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~-----------~~~ 229 (368)
T 3mmy_A 177 DVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVA-------------IFKDKQN-----------KPT 229 (368)
T ss_dssp EEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEE-------------EEECTTS-----------CEE
T ss_pred EecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEE-------------EcccCCC-----------CCC
Confidence 7765 37888889999999999864211 00011111000 0000000 000
Q ss_pred eeeeeeecCccceeeeccccccccccc-cccccccCccc------------ceeEEeeCCCCcceEEeccCCceEEEecC
Q psy18073 384 VFAKPFVGPREYVRALNATKLERVFAK-PFVANLDGHKD------------GISCLAKHPTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~------------~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~ 450 (639)
. +...+.+..+.. ++.+.... ..+..+.+|.. +|++++|+|++ .+|++|+.||.|++||+
T Consensus 230 ~--~~~~~~dg~i~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 230 G--FALGSIEGRVAI----HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDK 302 (368)
T ss_dssp E--EEEEETTSEEEE----EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEET
T ss_pred e--EEEecCCCcEEE----EecCCCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEEC
Confidence 0 111111111100 11111111 22345555655 79999999999 99999999999999999
Q ss_pred CccccceeeeeeccccccccccCCcccccccccccccCc
Q psy18073 451 TSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS 489 (639)
Q Consensus 451 ~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~ 489 (639)
.+++++..+.+|..+|++++|+|||..++.+...+|...
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp TTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred CCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 999999999999999999999999999998887777643
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.5e-33 Score=274.43 Aligned_cols=250 Identities=16% Similarity=0.237 Sum_probs=198.3
Q ss_pred hcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhc--cccccccccccccEEEEEECCC--CCeeEEEeeCCCc
Q psy18073 122 RETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFA--KPFVANLDGHKDGISCLAKHPT--KLSTIISGAYDGE 197 (639)
Q Consensus 122 ~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~l~~H~~~V~~l~~sp~--~~~~l~sgs~dg~ 197 (639)
..+...|..+.+.++.......+.+ ..+++|++.. .+++.++.+|.++|++++|+|+ + .+||||+.||+
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D~~ 78 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGK 78 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTTE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCC------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCCCE
Confidence 3455666666666666555444433 3578898864 4678899999999999999874 6 89999999999
Q ss_pred EEEEeCCCCc--eEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCC
Q psy18073 198 VKVWNLTSQS--CVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRK 273 (639)
Q Consensus 198 i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 273 (639)
|+|||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.|++|++||++++.... ......+...|.+++|+|+
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~--~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC--CEEEECCSSCEEEEEECCC
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee--eeeeecccCccceEeecCC
Confidence 9999998874 56778899999999999997 8999999999999999998754321 1223345678999999997
Q ss_pred -------------CCEEEEcCC--eeEEEeCCCCc----eeeeeecCCccEEEEEEcCCC--CcEEEEEeCCCcEEEEEC
Q psy18073 274 -------------SKIFATCGD--QCQLWEHERNE----PIRAFSWNVDSLHHVQFNPID--KHILASCASDRSIILYDT 332 (639)
Q Consensus 274 -------------~~~l~~~~~--~i~vwd~~~~~----~~~~~~~h~~~v~~v~~sp~~--~~~l~s~s~Dg~i~iwd~ 332 (639)
+.+|++|+. .|++||+++++ ....+.+|.+.|.+++|+|++ +.+|++|+.|++|++||+
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 468888874 99999998876 567889999999999999943 589999999999999998
Q ss_pred CCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccc
Q psy18073 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPF 412 (639)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (639)
++...... ..
T Consensus 237 ~~~~~~~~---------------------------------------------------------------------~~- 246 (297)
T 2pm7_B 237 DNEQGPWK---------------------------------------------------------------------KT- 246 (297)
T ss_dssp SSTTSCCE---------------------------------------------------------------------EE-
T ss_pred CCCCCccc---------------------------------------------------------------------ee-
Confidence 75321000 00
Q ss_pred cccccCcccceeEEeeCCCCcceEEeccCCceEEEecCC
Q psy18073 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT 451 (639)
Q Consensus 413 ~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~ 451 (639)
+....+|...|.+++|+|+| ++||+|+.||+|++|+..
T Consensus 247 ~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 247 LLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEEC
T ss_pred eeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEEC
Confidence 01124678899999999999 999999999999999975
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-34 Score=293.35 Aligned_cols=261 Identities=11% Similarity=0.110 Sum_probs=202.2
Q ss_pred cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC--ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCC
Q psy18073 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ--SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~--~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~ 246 (639)
+..|.++|++++|+|+| ++||+|+.||.|+|||+.++ +.+..+.+|.+.|.+++|+|++++|++++.||+|++||+.
T Consensus 7 ~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34467899999999999 89999999999999999988 7888899999999999999999999999999999999999
Q ss_pred CCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCc---eeeeeec-CCccEEEEEEcCCCCcEEEE
Q psy18073 247 LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNE---PIRAFSW-NVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~---~~~~~~~-h~~~v~~v~~sp~~~~~l~s 320 (639)
++.... .......+...|.+++|+|++.++++++. .|++||+++++ ....+.+ |...|.+++|+| ++++|++
T Consensus 86 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~ 163 (377)
T 3dwl_C 86 PDGTWK-QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-NNVLLAA 163 (377)
T ss_dssp ---CCC-CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-TSSEEEE
T ss_pred CCCcee-eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-CCCEEEE
Confidence 866110 11222345679999999999999998874 89999999887 4777887 999999999999 8899999
Q ss_pred EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeec
Q psy18073 321 CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALN 400 (639)
Q Consensus 321 ~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (639)
++.||+|++||++.......... .+.+
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~--------------------------------- 190 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEA--------------------SVWG--------------------------------- 190 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCS--------------------CSSC---------------------------------
T ss_pred EeCCCEEEEEEEEecccCCCccc--------------------cccc---------------------------------
Confidence 99999999999976543211100 0000
Q ss_pred cccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccc----ceeeeeeccccccccccCCcc
Q psy18073 401 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC----VQTYQAHDGHVRDTSTRPAVE 476 (639)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~----~~~l~~h~~~v~~v~~spdg~ 476 (639)
.+.....++..+ +|.+.|++++|+|++ .+|++|+.||.|++||+.+++. +..+.+|...|.+++|+|+|.
T Consensus 191 ----~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 264 (377)
T 3dwl_C 191 ----SRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA 264 (377)
T ss_dssp ----SCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE
T ss_pred ----cccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC
Confidence 000112223555 899999999999999 9999999999999999999988 889999999999999999998
Q ss_pred cccccccccccCcccccc
Q psy18073 477 TTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~ 494 (639)
.++.+ +.+....|..
T Consensus 265 ~l~~~---~~~~~~~~~~ 279 (377)
T 3dwl_C 265 IVAAG---YNYSPILLQG 279 (377)
T ss_dssp EEEEE---SSSSEEEECC
T ss_pred EEEEE---cCCcEEEEEe
Confidence 76544 2333445543
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.8e-33 Score=277.30 Aligned_cols=273 Identities=16% Similarity=0.195 Sum_probs=209.6
Q ss_pred ccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc---eEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy18073 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDNTIKT 242 (639)
Q Consensus 168 ~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~---~~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg~i~i 242 (639)
...+|.+.|++++|+|++ ++|++++ ||.|++||+.++. .+..+. +|...|.+++|+|++++|++++.||.|++
T Consensus 46 ~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 344799999999999999 8999998 9999999998765 333343 79999999999999999999999999999
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEE
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s 320 (639)
||+.+++... ......+...+.+++|+|++.++++++. .|++||+++++.+..+.+|...|.+++|+| ++++|++
T Consensus 124 ~d~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 200 (337)
T 1gxr_A 124 WDLAAPTPRI--KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWT 200 (337)
T ss_dssp EECCCC--EE--EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred EECCCCCcce--eeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC-CCCEEEE
Confidence 9999765311 1222334568999999999999998874 999999999999999999999999999999 8899999
Q ss_pred EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeec
Q psy18073 321 CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALN 400 (639)
Q Consensus 321 ~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (639)
++.||.|++||+++++.......... ...+.++|.+. .++. .+....+..
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~~~~~-----------v~~~~~s~~~~---------------~l~~--~~~~~~i~~-- 250 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHDFTSQ-----------IFSLGYCPTGE---------------WLAV--GMESSNVEV-- 250 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSC-----------EEEEEECTTSS---------------EEEE--EETTSCEEE--
T ss_pred EecCCcEEEEECCCCceEeeecCCCc-----------eEEEEECCCCC---------------EEEE--EcCCCcEEE--
Confidence 99999999999998876543221100 01122333322 1111 111111111
Q ss_pred cccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccc
Q psy18073 401 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~ 480 (639)
++..... ...+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+... .|...|.+++|+|+++.++.
T Consensus 251 ----~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 251 ----LHVNKPD-KYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVT 323 (337)
T ss_dssp ----EETTSSC-EEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEE
T ss_pred ----EECCCCC-eEEEcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEE
Confidence 1111111 24567899999999999999 99999999999999999999888554 68899999999999987765
Q ss_pred cc
Q psy18073 481 TR 482 (639)
Q Consensus 481 ~~ 482 (639)
+.
T Consensus 324 ~~ 325 (337)
T 1gxr_A 324 GS 325 (337)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.6e-33 Score=288.19 Aligned_cols=242 Identities=15% Similarity=0.229 Sum_probs=195.3
Q ss_pred ccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce--EEEEeccCCceEEEEEcC-CCCEEEEEecCCeE
Q psy18073 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC--VQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTI 240 (639)
Q Consensus 164 ~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~--~~~~~~h~~~V~~v~~sp-~~~~l~s~s~Dg~i 240 (639)
.......+|...|+||+|+|.++.+||+|+.||+|+|||+.++.. ...+.+|.+.|++|+|+| ++++|+|||.||+|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 344556789999999999997658999999999999999987754 344568999999999998 78999999999999
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEE
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l 318 (639)
++||+++...... .........+.+++++|++.++++|+. .|++||++ ++.+..+.+|...|.+++|+|++..+|
T Consensus 190 ~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 190 RLQDFKGNILRVF--ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEEETTSCEEEEE--ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EEeeccCCceeEE--eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE
Confidence 9999985322100 000112235788999999999999985 99999986 566788999999999999999666799
Q ss_pred EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceee
Q psy18073 319 ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRA 398 (639)
Q Consensus 319 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (639)
++|+.||+|++||+++.+....+
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~--------------------------------------------------------- 289 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASF--------------------------------------------------------- 289 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCC---------------------------------------------------------
T ss_pred EEecCcceeeEEecccccccceE---------------------------------------------------------
Confidence 99999999999999876543211
Q ss_pred eccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecc------cccccccc
Q psy18073 399 LNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG------HVRDTSTR 472 (639)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~------~v~~v~~s 472 (639)
....+|...|++++|+|+| .+|+||+.||+|+|||+.++++...+..|.. .+..+.|+
T Consensus 290 ---------------~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (435)
T 4e54_B 290 ---------------LYSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWH 353 (435)
T ss_dssp ---------------SBCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEEC
T ss_pred ---------------EEeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEc
Confidence 2335799999999999999 9999999999999999999999888877643 24456788
Q ss_pred CCccccccc
Q psy18073 473 PAVETTDLT 481 (639)
Q Consensus 473 pdg~~~~~~ 481 (639)
|++..++++
T Consensus 354 ~~~~~~~~~ 362 (435)
T 4e54_B 354 PRYNLIVVG 362 (435)
T ss_dssp SSSSCEEEE
T ss_pred CCCCEEEEE
Confidence 887665544
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-33 Score=284.03 Aligned_cols=253 Identities=13% Similarity=0.232 Sum_probs=206.6
Q ss_pred ccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCC--CCceEEEEeccCCceEEEEEcCC--CCEEEEEecCCe
Q psy18073 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT--SQSCVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNT 239 (639)
Q Consensus 164 ~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~--~~~~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~ 239 (639)
+++..+.+|.+.|++++|+|++ .+||+|+.||.|+|||+. +++.+..+.+|.+.|++++|+|+ +++|++|+.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4567899999999999999999 899999999999999997 56778889999999999999987 999999999999
Q ss_pred EEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCC--CCEEEEcCC--eeEEEeCCCCc--eeeeeecCCccEEEEEEcC
Q psy18073 240 IKTWSSELSESDHIVPLHTI-ISKSVISSISHQRK--SKIFATCGD--QCQLWEHERNE--PIRAFSWNVDSLHHVQFNP 312 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~--~i~vwd~~~~~--~~~~~~~h~~~v~~v~~sp 312 (639)
|++||+.+++.. ..... .+...|.+++|+|+ +.++++++. .|++||++++. ....+.+|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 81 VLIWKEENGRWS---QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp EEEEEEETTEEE---EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred EEEEEcCCCcee---EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 999999875411 12222 35678999999999 888888874 99999998874 4556788999999999999
Q ss_pred C------------CCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccc
Q psy18073 313 I------------DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATK 380 (639)
Q Consensus 313 ~------------~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 380 (639)
. ++.+|++|+.||.|++||++++....
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------------------------------------- 196 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY----------------------------------------- 196 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEE-----------------------------------------
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcce-----------------------------------------
Confidence 5 58899999999999999997643210
Q ss_pred cceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCC---CcceEEeccCCceEEEecCCccc---
Q psy18073 381 LERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPT---KLSTIISGAYDGEVKVWNLTSQS--- 454 (639)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~---~~~~l~sgs~Dg~v~iWd~~~~~--- 454 (639)
.....+.+|...|.+++|+|+ + .+|++|+.||.|++||+.++.
T Consensus 197 ------------------------------~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~ 245 (379)
T 3jrp_A 197 ------------------------------VLESTLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPW 245 (379)
T ss_dssp ------------------------------EEEEEECCCSSCEEEEEECCCCSSS-EEEEEEETTSCEEEEEESSTTSCC
T ss_pred ------------------------------eeEEEEecccCcEeEEEECCCCCCC-CeEEEEeCCCEEEEEeCCCCCccc
Confidence 012556789999999999999 7 999999999999999999864
Q ss_pred --cceeeeeeccccccccccCCcccccccccccccCcccccc
Q psy18073 455 --CVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 455 --~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~ 494 (639)
.+.....|...|.+++|+|+|+.++.+...| ..+.|..
T Consensus 246 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg--~i~iw~~ 285 (379)
T 3jrp_A 246 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN--KVTLWKE 285 (379)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEESSS--SEEEEEE
T ss_pred eeeeeccccCCCcEEEEEEcCCCCEEEEecCCC--cEEEEeC
Confidence 2223345888999999999998876654322 2366653
No 40
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4e-32 Score=277.64 Aligned_cols=298 Identities=13% Similarity=0.139 Sum_probs=217.7
Q ss_pred hhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe--ccCCceEEEEEcC-C
Q psy18073 151 ALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ--AHDGHVRDVCFLP-D 227 (639)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~--~h~~~V~~v~~sp-~ 227 (639)
......+|+....+....+.+|.+.|++++|+|+++.+|++|+.||.|+|||+.+++....+. +|.+.|.+++|+| +
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 51 CLQEPFIRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE
T ss_pred hhhccccccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC
Confidence 334456777777888889999999999999999986799999999999999999888877775 6999999999999 7
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcccceEEE----ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecC
Q psy18073 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTI----ISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWN 301 (639)
Q Consensus 228 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h 301 (639)
+++|++++.|++|++||+... . .... .+...+.+++|+|++.++++++. .|++||+ +++.+..+.+|
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~-~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h 203 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGS-V-----IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLH 203 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSC-E-----EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECS
T ss_pred CCEEEEEeCCCEEEEEECCCC-c-----eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccC
Confidence 899999999999999999852 2 1222 12357999999999999999985 9999999 57889999999
Q ss_pred CccEEEEEEcCCCCc-EEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCC-CCCchhhhhhcccc
Q psy18073 302 VDSLHHVQFNPIDKH-ILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNAT 379 (639)
Q Consensus 302 ~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~ 379 (639)
...|.+++|+| ++. +|++|+.||+|++||+++++......... .... ....+.|+| ++.
T Consensus 204 ~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~------~v~~~~~s~~~~~----------- 264 (383)
T 3ei3_B 204 KAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK------PVNAAYFNPTDST----------- 264 (383)
T ss_dssp SSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS------CEEEEEECTTTSC-----------
T ss_pred CCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC------ceEEEEEcCCCCC-----------
Confidence 99999999999 566 99999999999999999844322111111 0110 111123333 222
Q ss_pred ccceeeeeeeecCccceeeecccccccccc---ccccccccCc-------c----------cceeEEeeCCCCcceEEec
Q psy18073 380 KLERVFAKPFVGPREYVRALNATKLERVFA---KPFVANLDGH-------K----------DGISCLAKHPTKLSTIISG 439 (639)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~h-------~----------~~v~~v~~sp~~~~~l~sg 439 (639)
.+........++.|+ ......+.+| . +.+..++|+|++ .+ +|
T Consensus 265 ---------------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~ 326 (383)
T 3ei3_B 265 ---------------KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LL 326 (383)
T ss_dssp ---------------EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CT
T ss_pred ---------------EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCc-cc--cc
Confidence 111111111111111 1111222222 2 345557888888 66 99
Q ss_pred cCCceEEEecCCccccceeeee--eccccccccccCCcccccccccccccCccccccC
Q psy18073 440 AYDGEVKVWNLTSQSCVQTYQA--HDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQH 495 (639)
Q Consensus 440 s~Dg~v~iWd~~~~~~~~~l~~--h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~~ 495 (639)
+.||.|++||+.+++++.++.+ |.+.+..++|+|+|..++.+ +....+.|...
T Consensus 327 s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~---sd~~i~iw~~~ 381 (383)
T 3ei3_B 327 NDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG---MGFNILIWNRE 381 (383)
T ss_dssp TCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE---ETTEEEEEECC
T ss_pred CCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe---cCCcEEEEecC
Confidence 9999999999999999999987 45677778999999877655 22334777543
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-32 Score=280.97 Aligned_cols=244 Identities=21% Similarity=0.339 Sum_probs=198.1
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCC------------------ceEEEEEcCCCCEEE
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG------------------HVRDVCFLPDGSQFL 232 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~------------------~V~~v~~sp~~~~l~ 232 (639)
+|.+.|++++|+|+| ++||+|+ |++++||++.+++.+..+..|.. .|++++|+|+|++|+
T Consensus 62 ~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 699999999999999 8999986 68999999999999888866542 499999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQF 310 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 310 (639)
+|+.|++|++||+.+++.. .....+...|.+++|+|++..+++++. .|++||++++++...+. +...+.+++|
T Consensus 140 s~~~d~~i~iwd~~~~~~~----~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~ 214 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIV----MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAV 214 (393)
T ss_dssp EEETTSCEEEEETTTTEEE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEE
T ss_pred EEcCCCeEEEEECCCCcEE----EEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEE
Confidence 9999999999999876542 122235668999999999999999885 99999999999887776 5578999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
+|.++++|++|+.||+|++||++++..+..+..
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~----------------------------------------------- 247 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS----------------------------------------------- 247 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------------------------------------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc-----------------------------------------------
Confidence 997889999999999999999988654421100
Q ss_pred cCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCc------------ccccee
Q psy18073 391 GPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS------------QSCVQT 458 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~------------~~~~~~ 458 (639)
......+|...|.+++|+|+| .+|++|+.||+|++||+.+ +.+..+
T Consensus 248 ---------------------~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~ 305 (393)
T 1erj_A 248 ---------------------ENESGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 305 (393)
T ss_dssp --------------------------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC---------------CEEEE
T ss_pred ---------------------cccCCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEE
Confidence 002236799999999999999 9999999999999999975 345667
Q ss_pred eeeeccccccccccCCcccccccccccccC-ccccc
Q psy18073 459 YQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 459 l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~ 493 (639)
+.+|...|.+++|+|++..++.+ +.+. ...|.
T Consensus 306 ~~~h~~~v~~~~~~~~~~~l~sg---s~D~~v~iwd 338 (393)
T 1erj_A 306 YIGHKDFVLSVATTQNDEYILSG---SKDRGVLFWD 338 (393)
T ss_dssp EECCSSCEEEEEECGGGCEEEEE---ETTSEEEEEE
T ss_pred EecccCcEEEEEECCCCCEEEEE---eCCCeEEEEE
Confidence 88999999999999999776543 3443 36775
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.7e-33 Score=307.97 Aligned_cols=284 Identities=17% Similarity=0.239 Sum_probs=223.1
Q ss_pred hhhcccCccccccCCCCCCC-CCCCCchhHHHhhhhhhhhhhhcc-----ccccccccccccEEEEEECCCCCeeEEEee
Q psy18073 120 YLRETKTSIHRIPRNIDPSL-HPFEGPREYVRALNATKLERVFAK-----PFVANLDGHKDGISCLAKHPTKLSTIISGA 193 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs 193 (639)
.+..|...|..+.+.++... ....+.+ ..+++|++... ...+.+.+|...|.+++|+|+| ++|+||+
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D------~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs 449 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRD------KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG-QFALSGS 449 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETT------SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS-SEEEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCC------CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC-CEEEEEe
Confidence 35567778888776655432 2222223 35788887643 3456789999999999999999 9999999
Q ss_pred CCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCC
Q psy18073 194 YDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRK 273 (639)
Q Consensus 194 ~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 273 (639)
.||+|+|||+.+++.+..+.+|.+.|.+++|+|++++|+||+.|++|++||+...... ........+...|.+++|+|+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY-TISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSTTSCSSCEEEEEECSC
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce-eeccCCCCCCCcEEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999998642111 000001124567999999998
Q ss_pred C--CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccc
Q psy18073 274 S--KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETK 349 (639)
Q Consensus 274 ~--~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 349 (639)
+ ..+++++. .|++||+++++....+.+|.+.|.+++|+| ++++|++|+.||+|++||+++++.+.
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~---------- 597 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLY---------- 597 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEE----------
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEE----------
Confidence 7 56777763 999999999999999999999999999999 89999999999999999998875432
Q ss_pred cccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeC
Q psy18073 350 TSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKH 429 (639)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 429 (639)
.+. +...|.+++|+
T Consensus 598 -----------------------------------------------------------------~~~-~~~~v~~~~~s 611 (694)
T 3dm0_A 598 -----------------------------------------------------------------SLE-ANSVIHALCFS 611 (694)
T ss_dssp -----------------------------------------------------------------CCB-CSSCEEEEEEC
T ss_pred -----------------------------------------------------------------Eec-CCCcEEEEEEc
Confidence 111 33568999999
Q ss_pred CCCcceEEeccCCceEEEecCCccccceeeeeec-------------------cccccccccCCcccccccccccccCc-
Q psy18073 430 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-------------------GHVRDTSTRPAVETTDLTRSFGWESS- 489 (639)
Q Consensus 430 p~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~-------------------~~v~~v~~spdg~~~~~~~~~~~~~~- 489 (639)
|++ .++++++ |+.|++||+++++.+..+..+. ..+++++|||||+.++.+. .|+.
T Consensus 612 p~~-~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs---~Dg~i 686 (694)
T 3dm0_A 612 PNR-YWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY---TDGVI 686 (694)
T ss_dssp SSS-SEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE---TTSEE
T ss_pred CCC-cEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc---CCCeE
Confidence 998 7777665 5669999999998888775331 1367899999998876543 3433
Q ss_pred cccc
Q psy18073 490 DAWQ 493 (639)
Q Consensus 490 ~~~~ 493 (639)
+.|.
T Consensus 687 ~iW~ 690 (694)
T 3dm0_A 687 RVWG 690 (694)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6775
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-33 Score=287.23 Aligned_cols=313 Identities=14% Similarity=0.170 Sum_probs=230.8
Q ss_pred CccccccCCCCCC-CCCCCCchhHHHhhhhhhhhhh----hccc------ccccccc----------ccccEEEEEECCC
Q psy18073 126 TSIHRIPRNIDPS-LHPFEGPREYVRALNATKLERV----FAKP------FVANLDG----------HKDGISCLAKHPT 184 (639)
Q Consensus 126 ~~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~----~~~~------~~~~l~~----------H~~~V~~l~~sp~ 184 (639)
..|..+.+.++.. .....+.+ ..+++|++ .++. ....+.. |.+.|++++|+|+
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN------SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB------TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred CceEEEEECCCCCcEEEEecCC------ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 5666777777665 44443333 35788888 6665 3333333 6889999999999
Q ss_pred CCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEe----
Q psy18073 185 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTII---- 260 (639)
Q Consensus 185 ~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~---- 260 (639)
+ .+|++|+.||.|++|| .+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+......
T Consensus 120 ~-~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 120 G-NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp S-SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred C-CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 9 9999999999999999 678889999999999999999999999999999999999999876543222211100
Q ss_pred -------cCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q psy18073 261 -------SKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332 (639)
Q Consensus 261 -------~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~ 332 (639)
....+.++.++|++.+++.+.+ .|++||+++++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND-TNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEECS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC-CCCEEEEEcCCCEEEEEEC
Confidence 0011889999998776665555 999999999999999999999999999999 8889999999999999999
Q ss_pred CCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccc
Q psy18073 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPF 412 (639)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (639)
++++....+... ...+..+.....+ . +...+....+ ..++......
T Consensus 277 ~~~~~~~~~~~~-------------------------~~~i~~~~~~~~~-~--l~~~~~d~~i------~i~d~~~~~~ 322 (425)
T 1r5m_A 277 GNGNSQNCFYGH-------------------------SQSIVSASWVGDD-K--VISCSMDGSV------RLWSLKQNTL 322 (425)
T ss_dssp SSBSCSEEECCC-------------------------SSCEEEEEEETTT-E--EEEEETTSEE------EEEETTTTEE
T ss_pred CCCccceEecCC-------------------------CccEEEEEECCCC-E--EEEEeCCCcE------EEEECCCCcE
Confidence 987655432210 0111112222111 0 1111111111 1112223445
Q ss_pred cccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc--------------------cceeeeeecc--cccccc
Q psy18073 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS--------------------CVQTYQAHDG--HVRDTS 470 (639)
Q Consensus 413 ~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~--------------------~~~~l~~h~~--~v~~v~ 470 (639)
+..+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++ ++..+.+|.. .|.+++
T Consensus 323 ~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 401 (425)
T 1r5m_A 323 LALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS 401 (425)
T ss_dssp EEEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEE
T ss_pred eEecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEE
Confidence 57778899999999999999 999999999999999999998 8899999976 999999
Q ss_pred ccCCcccccccc
Q psy18073 471 TRPAVETTDLTR 482 (639)
Q Consensus 471 ~spdg~~~~~~~ 482 (639)
|+|++..++.+.
T Consensus 402 ~s~~~~~l~~~~ 413 (425)
T 1r5m_A 402 WNCAGNKISVAY 413 (425)
T ss_dssp ECTTSSEEEEEE
T ss_pred ccCCCceEEEEe
Confidence 999998776553
No 44
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-32 Score=271.24 Aligned_cols=284 Identities=17% Similarity=0.193 Sum_probs=217.1
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+..+...|..+.+.++.......+.+ ..+++||+.++..+..+.+|..+|.+++|+|++ ++|++|+.|++|++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYS------GRVELWNYETQVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRV 81 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCC------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEE
Confidence 44566777788777777655544433 358999999999999999999999999999999 99999999999999
Q ss_pred EeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecC-CCCEEE
Q psy18073 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQR-KSKIFA 278 (639)
Q Consensus 201 Wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~ 278 (639)
||+.+++++..+.+|.+.|.+++|+|++++|++|+.||+|++||++++... ...+ .+...|.+++|+| ++..++
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL----EQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE----EEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch----hhhhcccCCcEEEEEECCCCCCEEE
Confidence 999999999999999999999999999999999999999999999865332 2222 3556899999999 678888
Q ss_pred EcCC--eeEEEeCCCCceeeeee-cCCccEEEEEEcCC-CCcEEEEEeCCCcEEEEECCCccccCCcccccccccccccc
Q psy18073 279 TCGD--QCQLWEHERNEPIRAFS-WNVDSLHHVQFNPI-DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHR 354 (639)
Q Consensus 279 ~~~~--~i~vwd~~~~~~~~~~~-~h~~~v~~v~~sp~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 354 (639)
+|+. .|++||++++.+...+. +|...|..+.|+|. ++.+|++|+.||+|++||+++++++..+....
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~--------- 228 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM--------- 228 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS---------
T ss_pred EEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC---------
Confidence 8874 99999999888766665 46688999999873 56799999999999999999887664432111
Q ss_pred ccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccc---cccccccccCcccceeEEeeCCC
Q psy18073 355 IPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPT 431 (639)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~v~~sp~ 431 (639)
..+....+......+...+.+..++.| ...++..+.+|...+.+++|+|+
T Consensus 229 ---------------------------~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 229 ---------------------------SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (304)
T ss_dssp ---------------------------SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTT
T ss_pred ---------------------------CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCC
Confidence 011112222222222222233333333 34556788899999999999998
Q ss_pred Ccc-eEEeccCCceEEEecCCc
Q psy18073 432 KLS-TIISGAYDGEVKVWNLTS 452 (639)
Q Consensus 432 ~~~-~l~sgs~Dg~v~iWd~~~ 452 (639)
+.. ++|+|+.|| +.+|++..
T Consensus 282 ~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 282 GRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp CGGGCEEEEETTE-EEEEECC-
T ss_pred CCceEEEEecCCc-eEEEEecc
Confidence 833 588887666 66777653
No 45
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=284.31 Aligned_cols=260 Identities=17% Similarity=0.311 Sum_probs=217.7
Q ss_pred hhhhhhhhccc---cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC----CceEEEEeccCCceEEEEEcC
Q psy18073 154 ATKLERVFAKP---FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS----QSCVQTYQAHDGHVRDVCFLP 226 (639)
Q Consensus 154 ~~~~~~~~~~~---~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~----~~~~~~~~~h~~~V~~v~~sp 226 (639)
.+++|++.++. .+..+ +|...|++++|+|++ .+|++|+.||.|++||+.+ .+.+..+.+|.+.|.+++|+|
T Consensus 46 ~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 123 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNA 123 (416)
T ss_dssp CCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECS
T ss_pred eEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCC-CeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcC
Confidence 58899988765 44444 599999999999999 8999999999999999987 458888999999999999999
Q ss_pred C-CCEEEEEecCCeEEEEeCCCCC------CCcccceEEEecCCeeEEeeecCC-CCEEEEcCC--eeEEEeCCCCceee
Q psy18073 227 D-GSQFLSVGIDNTIKTWSSELSE------SDHIVPLHTIISKSVISSISHQRK-SKIFATCGD--QCQLWEHERNEPIR 296 (639)
Q Consensus 227 ~-~~~l~s~s~Dg~i~iwd~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~--~i~vwd~~~~~~~~ 296 (639)
+ +++|++++.||+|++||+.++. ..... .....+...+.+++|+|+ +.++++++. .|++||+++++.+.
T Consensus 124 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 124 KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 8 8999999999999999999865 21111 111235568999999999 788888774 89999999999999
Q ss_pred eeecC------CccEEEEEEcCCCCcEEEEEeCCC---cEEEEECCCccccCCccccccccccccccccCCCCCCCCCCC
Q psy18073 297 AFSWN------VDSLHHVQFNPIDKHILASCASDR---SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFE 367 (639)
Q Consensus 297 ~~~~h------~~~v~~v~~sp~~~~~l~s~s~Dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (639)
.+..| ...|.+++|+|++..++++++.|+ .|++||++++...
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~----------------------------- 253 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP----------------------------- 253 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-----------------------------
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-----------------------------
Confidence 88877 789999999995557999999999 9999999875321
Q ss_pred CchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccccc-CcccceeEEeeCC-CCcceEEeccCCceE
Q psy18073 368 GPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLD-GHKDGISCLAKHP-TKLSTIISGAYDGEV 445 (639)
Q Consensus 368 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp-~~~~~l~sgs~Dg~v 445 (639)
+..+. +|...|.+++|+| ++ .+|++|+.||.|
T Consensus 254 ---------------------------------------------~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v 287 (416)
T 2pm9_A 254 ---------------------------------------------LQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTV 287 (416)
T ss_dssp ---------------------------------------------SBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEE
T ss_pred ---------------------------------------------cEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCE
Confidence 14455 7999999999999 77 999999999999
Q ss_pred EEecCCccccceeeeeeccccccccccCCc-ccccccccccccC-cccccc
Q psy18073 446 KVWNLTSQSCVQTYQAHDGHVRDTSTRPAV-ETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 446 ~iWd~~~~~~~~~l~~h~~~v~~v~~spdg-~~~~~~~~~~~~~-~~~~~~ 494 (639)
++||+.+++++..+.+|.+.|.+++|+|++ ..++.+ +.+. .+.|..
T Consensus 288 ~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~---~~d~~i~iw~~ 335 (416)
T 2pm9_A 288 LLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACA---SFDNKIEVQTL 335 (416)
T ss_dssp EEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEEC---CSSSEEEEEES
T ss_pred EEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEE---ecCCcEEEEEc
Confidence 999999999999999999999999999998 444433 3343 367753
No 46
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-32 Score=278.40 Aligned_cols=287 Identities=17% Similarity=0.245 Sum_probs=239.7
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+..+...|..+.+.++.......+.+ ..+++|++.+++.+..+.+|.+.|.+++|+|++ ++|++++.||.|++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKD------SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIKL 100 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESS------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCC------CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEEE
Confidence 44566777777777766655443333 358899999999999999999999999999999 89999999999999
Q ss_pred EeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCCCCcccc------eEE-EecCC--eeE
Q psy18073 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID-----NTIKTWSSELSESDHIVP------LHT-IISKS--VIS 266 (639)
Q Consensus 201 Wd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D-----g~i~iwd~~~~~~~~~~~------~~~-~~~~~--~v~ 266 (639)
||+.+++.+..+. |...|.+++|+|+++++++++.+ |.|++||+.......... ... ..+.. .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999999888 88999999999999999999999 999999998765432211 111 12222 899
Q ss_pred EeeecCCCCEEEEcCC--eeEEEeCCC-CceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccc
Q psy18073 267 SISHQRKSKIFATCGD--QCQLWEHER-NEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDE 343 (639)
Q Consensus 267 ~~~~~~~~~~l~~~~~--~i~vwd~~~-~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 343 (639)
+++|+|++..+++++. .|++||+++ ++.+..+..|...|.+++|+| ++.+|++++.||.|++||+++++..
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~----- 253 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVL----- 253 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE-----
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEEECCCCcee-----
Confidence 9999999999998874 899999998 788999999999999999999 8999999999999999999876543
Q ss_pred cccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccce
Q psy18073 344 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423 (639)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 423 (639)
..+. +...+
T Consensus 254 ----------------------------------------------------------------------~~~~-~~~~~ 262 (369)
T 3zwl_B 254 ----------------------------------------------------------------------KKYE-TDCPL 262 (369)
T ss_dssp ----------------------------------------------------------------------EEEE-CSSCE
T ss_pred ----------------------------------------------------------------------eeec-CCCCc
Confidence 1122 56788
Q ss_pred eEEeeCCCCcceEEeccCCc--------------eEEEecCCccccceeeeeeccccccccccCCcccccccccccccC-
Q psy18073 424 SCLAKHPTKLSTIISGAYDG--------------EVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES- 488 (639)
Q Consensus 424 ~~v~~sp~~~~~l~sgs~Dg--------------~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~- 488 (639)
.+++|+|++ .++++++.++ .|++||+.+++.+..+.+|.+.|.+++|+|+|+.++.+. .++
T Consensus 263 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~---~dg~ 338 (369)
T 3zwl_B 263 NTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG---EDGF 338 (369)
T ss_dssp EEEEECSSS-SEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSE
T ss_pred eeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc---CCCe
Confidence 999999999 9999999888 899999999999999999999999999999998766543 343
Q ss_pred ccccccCC
Q psy18073 489 SDAWQQHD 496 (639)
Q Consensus 489 ~~~~~~~d 496 (639)
.+.|.-..
T Consensus 339 v~iw~~~~ 346 (369)
T 3zwl_B 339 IRLHHFEK 346 (369)
T ss_dssp EEEEEECH
T ss_pred EEEEECcc
Confidence 37776443
No 47
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.4e-32 Score=280.02 Aligned_cols=283 Identities=17% Similarity=0.227 Sum_probs=206.5
Q ss_pred hhhhhhhhhhccccccccc--cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCC
Q psy18073 152 LNATKLERVFAKPFVANLD--GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229 (639)
Q Consensus 152 ~~~~~~~~~~~~~~~~~l~--~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~ 229 (639)
-+.+++||..++++++.+. +|...|++|+|+|+| .+||+|+.||+|+|||+.+++++..+.+|...|.+++|+ +.
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~ 200 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY 200 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence 3579999999998877654 678899999999999 999999999999999999999999999999999998884 67
Q ss_pred EEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCc----eeeeeecCC
Q psy18073 230 QFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFATCGD--QCQLWEHERNE----PIRAFSWNV 302 (639)
Q Consensus 230 ~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~----~~~~~~~h~ 302 (639)
.|++|+.|+.+++||....... ...+ .+...+..+.++|++.++++++. .+++||..+++ .+.....|.
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~----~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~ 276 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHH----VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ 276 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCE----EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS
T ss_pred EEEEEeCCCceeEeeeccccee----eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccC
Confidence 9999999999999999865432 3333 45568999999999999999885 99999998875 456778899
Q ss_pred ccEEEEEEcCCCCcEEEEE--eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccc
Q psy18073 303 DSLHHVQFNPIDKHILASC--ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATK 380 (639)
Q Consensus 303 ~~v~~v~~sp~~~~~l~s~--s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 380 (639)
+.|.+++|+|.++.+++++ +.|++|++||++++.+...+....... ...+.+.+.
T Consensus 277 ~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~-----------~~~~~~~~~------------ 333 (420)
T 4gga_A 277 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVC-----------SILWSPHYK------------ 333 (420)
T ss_dssp SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEE-----------EEEEETTTT------------
T ss_pred CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccccee-----------eeeecCCCC------------
Confidence 9999999999778888764 579999999999987764433211110 011222221
Q ss_pred cceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeee
Q psy18073 381 LERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 460 (639)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~ 460 (639)
.+. ...+..+. ....|+......+.++.||.+.|++++|+|+| .+|||||.||+|+|||+.+..+....+
T Consensus 334 ---~lv-~~sg~~d~-----~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg-~~l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 334 ---ELI-SGHGFAQN-----QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG-ATVASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp ---EEE-EEECTTTC-----CEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SCEEEEETTTEEEEECCSCSSCC----
T ss_pred ---eEE-EEEecCCC-----EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEecCCeEEEEECCCCCccchhh
Confidence 100 01111111 11122333456678899999999999999999 999999999999999998887777776
Q ss_pred eeccccccccccCC
Q psy18073 461 AHDGHVRDTSTRPA 474 (639)
Q Consensus 461 ~h~~~v~~v~~spd 474 (639)
.+...+....+...
T Consensus 404 ~~~~~~~~~s~~~~ 417 (420)
T 4gga_A 404 REKASAAKSSLIHQ 417 (420)
T ss_dssp --------------
T ss_pred hccCCccccccCCC
Confidence 66655555444433
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-33 Score=279.13 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=192.8
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc--cccccccccccEEEEEECCC--CCeeEEEeeCCC
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP--FVANLDGHKDGISCLAKHPT--KLSTIISGAYDG 196 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~l~~H~~~V~~l~~sp~--~~~~l~sgs~dg 196 (639)
+..+...|..+.+.++.......+.+ ..+++|++.++. ++.++.+|.++|++++|+|+ + .+|+||+.|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSD------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCSYDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETT------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEETTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEECCC
Confidence 44566667667666665544443333 358899987653 56889999999999999863 6 8999999999
Q ss_pred cEEEEeCCCC--ceEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecC
Q psy18073 197 EVKVWNLTSQ--SCVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQR 272 (639)
Q Consensus 197 ~i~vWd~~~~--~~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 272 (639)
+|++||+.++ ..+..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++........ .....+...+.+++|+|
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~-~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK-KINNAHTIGCNAVSWAP 160 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC-CBTTSSSSCBCCCEECC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee-eeeccccCCcceEEEcc
Confidence 9999999887 467778899999999999997 789999999999999999865321000 01112345788899998
Q ss_pred C-----------------CCEEEEcCC--eeEEEeCCCC---ceeeeeecCCccEEEEEEcCCC---CcEEEEEeCCCcE
Q psy18073 273 K-----------------SKIFATCGD--QCQLWEHERN---EPIRAFSWNVDSLHHVQFNPID---KHILASCASDRSI 327 (639)
Q Consensus 273 ~-----------------~~~l~~~~~--~i~vwd~~~~---~~~~~~~~h~~~v~~v~~sp~~---~~~l~s~s~Dg~i 327 (639)
+ +.++++++. .|++||++.+ +++..+.+|.+.|.+++|+|++ +.+|++|+.||+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 7 467888874 9999999765 4677889999999999999942 3799999999999
Q ss_pred EEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccc
Q psy18073 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERV 407 (639)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (639)
++||+.+......
T Consensus 241 ~iw~~~~~~~~~~------------------------------------------------------------------- 253 (316)
T 3bg1_A 241 FIWTCDDASSNTW------------------------------------------------------------------- 253 (316)
T ss_dssp EEEECSSTTCCCC-------------------------------------------------------------------
T ss_pred EEEEccCccccch-------------------------------------------------------------------
Confidence 9999875311000
Q ss_pred ccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCC
Q psy18073 408 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT 451 (639)
Q Consensus 408 ~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~ 451 (639)
....+.+|.+.|.+++|+|++ .+||+|+.||+|++|+..
T Consensus 254 ----~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 254 ----SPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ----BCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEEC
T ss_pred ----hhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEEC
Confidence 002235688899999999999 999999999999999975
No 49
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-32 Score=277.64 Aligned_cols=282 Identities=18% Similarity=0.217 Sum_probs=214.0
Q ss_pred hHHHhhhhhhhhhhhccccccccccccccEEEEEECC-CCCeeEEEeeCCCcEEEEeCCCCceEEEEe------------
Q psy18073 147 EYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQ------------ 213 (639)
Q Consensus 147 ~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~------------ 213 (639)
........+++|++..++....+.+|.+.|++++|+| ++ .+|++|+.||.|++||+.++.....+.
T Consensus 17 ~~~~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 95 (408)
T 4a11_B 17 RLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHP 95 (408)
T ss_dssp HHHHHHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCT
T ss_pred ceeeccCcceeeccccCcceeeeeccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccceEecccccccccccc
Confidence 3344556789999999999999999999999999999 88 999999999999999999876544442
Q ss_pred -ccCCceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC---CEEEEcCC--eeEE
Q psy18073 214 -AHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS---KIFATCGD--QCQL 286 (639)
Q Consensus 214 -~h~~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~--~i~v 286 (639)
+|.+.|.+++|+| ++.+|++++.||.|++||+.+++. .........+.++.+++.+ .++++++. .|++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT-----ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc-----ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 5999999999999 788999999999999999997654 4445566788889888844 47887774 9999
Q ss_pred EeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccC-CccccccccccccccccCCCCCCCCC
Q psy18073 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSR-NPDEYLRETKTSIHRIPRNIDPSLHP 365 (639)
Q Consensus 287 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (639)
||+++++.+..+.+|.+.|.+++|+|++..+|++|+.||.|++||++++.... .+......
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------------------ 232 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGK------------------ 232 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC------------------
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccc------------------
Confidence 99999999999999999999999999444479999999999999998765221 11000000
Q ss_pred CCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceE
Q psy18073 366 FEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEV 445 (639)
Q Consensus 366 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v 445 (639)
..........+|...|.+++|+|++ .+|++|+.||.|
T Consensus 233 ------------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i 269 (408)
T 4a11_B 233 ------------------------------------------KSQAVESANTAHNGKVNGLCFTSDG-LHLLTVGTDNRM 269 (408)
T ss_dssp ------------------------------------------SCCCTTTSSCSCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred ------------------------------------------cceeeccccccccCceeEEEEcCCC-CEEEEecCCCeE
Confidence 0000113334566666666666666 666666666666
Q ss_pred EEecCC-----------------------------------------------ccccceeeeeeccccccccccCCcccc
Q psy18073 446 KVWNLT-----------------------------------------------SQSCVQTYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 446 ~iWd~~-----------------------------------------------~~~~~~~l~~h~~~v~~v~~spdg~~~ 478 (639)
++||+. +++++..+.+|.+.|.+++|+|++..+
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQEL 349 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEE
Confidence 666654 445666778899999999999999876
Q ss_pred cccccccccC-ccccccCChH
Q psy18073 479 DLTRSFGWES-SDAWQQHDIQ 498 (639)
Q Consensus 479 ~~~~~~~~~~-~~~~~~~d~~ 498 (639)
+.+ +.++ ...|.....+
T Consensus 350 ~s~---~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 350 YSG---SRDCNILAWVPSLYE 367 (408)
T ss_dssp EEE---ETTSCEEEEEECC--
T ss_pred EEE---CCCCeEEEEeCCCCC
Confidence 644 3444 3788755444
No 50
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.7e-32 Score=299.94 Aligned_cols=245 Identities=19% Similarity=0.302 Sum_probs=204.2
Q ss_pred ccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC-----CceEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy18073 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-----QSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTI 240 (639)
Q Consensus 166 ~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i 240 (639)
...+++|++.|++++|+|++..+|+||+.||+|+|||+.+ +.....+.+|...|.+++|+|++++|+||+.||+|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 3568899999999999998757999999999999999875 34567789999999999999999999999999999
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeee---ecCCccEEEEEEcCCC-
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAF---SWNVDSLHHVQFNPID- 314 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~---~~h~~~v~~v~~sp~~- 314 (639)
++||+.++... .....+...|.+++|+|++..+++++. .|++||.......... .+|...|.+++|+|++
T Consensus 455 ~vwd~~~~~~~----~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 455 RLWDLAAGVST----RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp EEEETTTTEEE----EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred EEEECCCCcce----eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 99999876543 222346678999999999999999884 9999998755433322 4688999999999943
Q ss_pred CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcc
Q psy18073 315 KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPRE 394 (639)
Q Consensus 315 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 394 (639)
...|++|+.||+|++||+++++..
T Consensus 531 ~~~l~s~s~d~~v~vwd~~~~~~~-------------------------------------------------------- 554 (694)
T 3dm0_A 531 QPTIVSASWDKTVKVWNLSNCKLR-------------------------------------------------------- 554 (694)
T ss_dssp SCEEEEEETTSCEEEEETTTCCEE--------------------------------------------------------
T ss_pred cceEEEEeCCCeEEEEECCCCcEE--------------------------------------------------------
Confidence 268999999999999999765432
Q ss_pred ceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCC
Q psy18073 395 YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
..+.+|.+.|++++|+|++ .+|+||+.||+|++||+.+++++..+.. ...|.+++|+|+
T Consensus 555 -------------------~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~ 613 (694)
T 3dm0_A 555 -------------------STLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPN 613 (694)
T ss_dssp -------------------EEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSS
T ss_pred -------------------EEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCC
Confidence 4567899999999999999 9999999999999999999999988854 468999999999
Q ss_pred cccccccccccccCcccccc
Q psy18073 475 VETTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 475 g~~~~~~~~~~~~~~~~~~~ 494 (639)
+..++.+.. ...+.|..
T Consensus 614 ~~~l~~~~~---~~i~iwd~ 630 (694)
T 3dm0_A 614 RYWLCAATE---HGIKIWDL 630 (694)
T ss_dssp SSEEEEEET---TEEEEEET
T ss_pred CcEEEEEcC---CCEEEEEC
Confidence 976654432 22466653
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-33 Score=287.99 Aligned_cols=283 Identities=12% Similarity=0.177 Sum_probs=225.5
Q ss_pred ccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhc----cccccccccccccEEEEEECCCCCeeEEEeeCCCcEE
Q psy18073 124 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFA----KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVK 199 (639)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~ 199 (639)
+...+..+.+.++.......+.+ ..+++|++.. .+.+..+.+|.+.|++++|+|++..+|++|+.||.|+
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDN------GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESS------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred cCCceEEEEECCCCCeEEEEccC------CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 34556666666655544433332 3578899877 4578889999999999999999338999999999999
Q ss_pred EEeCCCCc------eEEE---EeccCCceEEEEEcCC-CCEEEEEecCCeEEEEeCCCCCCCcccceEEEec-------C
Q psy18073 200 VWNLTSQS------CVQT---YQAHDGHVRDVCFLPD-GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIIS-------K 262 (639)
Q Consensus 200 vWd~~~~~------~~~~---~~~h~~~V~~v~~sp~-~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~-------~ 262 (639)
+||+.+++ .... +.+|...|.+++|+|+ +.+|++++.||.|++||+++++.. ..... .
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEV-----IHLSYTSPNSGIK 214 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEE-----EEECCCCCSSCCC
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcc-----eEEeccccccccC
Confidence 99998876 3332 3679999999999998 789999999999999999986543 22222 5
Q ss_pred CeeEEeeecCCC-CEEEEcC--C---eeEEEeCCCC-ceeeeee-cCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 263 SVISSISHQRKS-KIFATCG--D---QCQLWEHERN-EPIRAFS-WNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 263 ~~v~~~~~~~~~-~~l~~~~--~---~i~vwd~~~~-~~~~~~~-~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
..+.+++|+|++ .++++++ + .|++||++++ .++..+. +|...|.+++|+|.++.+|++++.||+|++||+++
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 689999999997 5777766 2 8999999987 6788888 99999999999997788999999999999999987
Q ss_pred ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccc
Q psy18073 335 TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVA 414 (639)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (639)
++.+ .
T Consensus 295 ~~~~---------------------------------------------------------------------------~ 299 (416)
T 2pm9_A 295 AEQL---------------------------------------------------------------------------S 299 (416)
T ss_dssp CCEE---------------------------------------------------------------------------E
T ss_pred Cccc---------------------------------------------------------------------------e
Confidence 6443 4
Q ss_pred cccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeee---------------------------------
Q psy18073 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA--------------------------------- 461 (639)
Q Consensus 415 ~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~--------------------------------- 461 (639)
.+.+|...|.+++|+|+++.+|++++.||.|++||+.++........
T Consensus 300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 56689999999999999867999999999999999988765543322
Q ss_pred --eccccccccccCCcccccccccccccCcccccc
Q psy18073 462 --HDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 462 --h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~ 494 (639)
|..++..++|+|||+.++.+...+ ..+.|..
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~--~v~~w~~ 412 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGK--GVSITNP 412 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSS--CBCCBCC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCC--eEEEEEe
Confidence 667888999999999887664222 2367753
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-32 Score=282.56 Aligned_cols=246 Identities=16% Similarity=0.169 Sum_probs=205.3
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
+.+++|++.+++.+..+.+|.+.|++++|+|++ .+|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++++|+
T Consensus 119 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp SCEEEECTTSCEEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred CCEEEEeCCCcceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 458999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceE--------EE------------ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCC
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLH--------TI------------ISKSVISSISHQRKSKIFATCGD--QCQLWEHE 290 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~--------~~------------~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~ 290 (639)
+++.||+|++||+++++....+..+ .. .+...+.+++|+|++.++++++. .|++||++
T Consensus 198 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 9999999999999976543222110 00 01246677888999999999884 89999999
Q ss_pred CCceeeeee-cCCccEEEEEEcCCCCc-EEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCC
Q psy18073 291 RNEPIRAFS-WNVDSLHHVQFNPIDKH-ILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEG 368 (639)
Q Consensus 291 ~~~~~~~~~-~h~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (639)
+++.+..+. +|...|.+++|+| ++. +|++|+.||.|++||++++...
T Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~~~~~~------------------------------ 326 (420)
T 3vl1_A 278 SKEQTIQLPSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLRSPECP------------------------------ 326 (420)
T ss_dssp TCCEEEEECCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCTTSC------------------------------
T ss_pred CCceeEEcccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcCCCcCc------------------------------
Confidence 998777764 5889999999999 565 9999999999999999875431
Q ss_pred chhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccC-cccceeEEeeCCCCcceEEeccCCceEEE
Q psy18073 369 PREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG-HKDGISCLAKHPTKLSTIISGAYDGEVKV 447 (639)
Q Consensus 369 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~sgs~Dg~v~i 447 (639)
+..+.+ |...|.++.+. ++ .+|++|+.||.|++
T Consensus 327 --------------------------------------------~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 327 --------------------------------------------VGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKL 360 (420)
T ss_dssp --------------------------------------------SEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEE
T ss_pred --------------------------------------------hhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEE
Confidence 023333 66788888554 67 89999999999999
Q ss_pred ecCCcc---------ccceeeeeeccccccccccCCcc
Q psy18073 448 WNLTSQ---------SCVQTYQAHDGHVRDTSTRPAVE 476 (639)
Q Consensus 448 Wd~~~~---------~~~~~l~~h~~~v~~v~~spdg~ 476 (639)
||+... .....+.+|.+.|.+++|+|+++
T Consensus 361 w~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 361 DIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp EEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred EeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 998873 22334567889999999999998
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.5e-33 Score=283.66 Aligned_cols=283 Identities=14% Similarity=0.149 Sum_probs=224.5
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc------cccccccccccEEEEEECCC----C--Cee
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP------FVANLDGHKDGISCLAKHPT----K--LST 188 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~l~~H~~~V~~l~~sp~----~--~~~ 188 (639)
+..+...|..+.+.+ ......+.+ +.+++|++.+++ .+..+.+|...|++++|+|+ + ..+
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCC------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 445666777776644 222222222 458899998877 78889999999999999998 4 158
Q ss_pred EEEeeCCCcEEEEeCCCCce-----EEEEecc-----CCceEEEEEc----CCCCE-EEEEecCCeEEEEeCCC------
Q psy18073 189 IISGAYDGEVKVWNLTSQSC-----VQTYQAH-----DGHVRDVCFL----PDGSQ-FLSVGIDNTIKTWSSEL------ 247 (639)
Q Consensus 189 l~sgs~dg~i~vWd~~~~~~-----~~~~~~h-----~~~V~~v~~s----p~~~~-l~s~s~Dg~i~iwd~~~------ 247 (639)
|++|+.||.|++||+.+++. +..+.+| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999998887 8888888 5999999999 99999 99999999999999997
Q ss_pred CCCCcccceEEEe--------cCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeec---C---CccEEEEEEc
Q psy18073 248 SESDHIVPLHTII--------SKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSW---N---VDSLHHVQFN 311 (639)
Q Consensus 248 ~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~---h---~~~v~~v~~s 311 (639)
+......+...+. +...+.+++|+|++ ++++++. .|++||+++++.+..+.. | ...|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 5554322222332 46789999999999 8888874 999999999999999999 9 9999999999
Q ss_pred CCCCcEEEEEeCC---CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeee
Q psy18073 312 PIDKHILASCASD---RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP 388 (639)
Q Consensus 312 p~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 388 (639)
| ++.+|++++.| |.|++||+++++.+..+.......
T Consensus 243 ~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~---------------------------------------- 281 (397)
T 1sq9_A 243 P-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS---------------------------------------- 281 (397)
T ss_dssp S-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------------------------------------------
T ss_pred C-CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc----------------------------------------
Confidence 9 89999999999 999999998875542211000000
Q ss_pred eecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeee------ee
Q psy18073 389 FVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ------AH 462 (639)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~------~h 462 (639)
........|...|.+++|+|++ .+|++|+.||.|++||+.+++++..+. +|
T Consensus 282 ----------------------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1sq9_A 282 ----------------------QASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI 338 (397)
T ss_dssp --------------------------CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSS
T ss_pred ----------------------cccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCceeEEEecccCcccc
Confidence 0001112388999999999999 999999999999999999999999999 88
Q ss_pred ---------------ccccccccccCCcc
Q psy18073 463 ---------------DGHVRDTSTRPAVE 476 (639)
Q Consensus 463 ---------------~~~v~~v~~spdg~ 476 (639)
...|.+++|+|+|.
T Consensus 339 ~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 339 EEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp GGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred hhhhhccccccccccCCceeEEEeccccc
Confidence 99999999999984
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-32 Score=269.76 Aligned_cols=236 Identities=19% Similarity=0.295 Sum_probs=201.0
Q ss_pred cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC-----ceEEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy18073 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ-----SCVQTYQAHDGHVRDVCFLPDGSQFLSVGID 237 (639)
Q Consensus 163 ~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~-----~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D 237 (639)
..+..+|+||++.|++|+|+|+++++|||||.||+|+|||+.++ .+...+.+|.+.|.+++|+|++++|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 44667899999999999999985489999999999999998764 3567789999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCce-eeeeecCCccEEEEEEcCCC
Q psy18073 238 NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEP-IRAFSWNVDSLHHVQFNPID 314 (639)
Q Consensus 238 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~-~~~~~~h~~~v~~v~~sp~~ 314 (639)
+.|++|+....... .........+....+++++..+++++. .+++||...... .....+|...+..++|+++.
T Consensus 108 ~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 108 GTLRLWDLTTGTTT----RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp SEEEEEETTTTEEE----EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred ccceEEeeccccee----eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 99999999875432 333344567888899999999998874 999999977654 44567899999999999843
Q ss_pred -CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCc
Q psy18073 315 -KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPR 393 (639)
Q Consensus 315 -~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 393 (639)
..++++++.|++|++||+++++..
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~------------------------------------------------------- 208 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLK------------------------------------------------------- 208 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEE-------------------------------------------------------
T ss_pred CCcEEEEEcCCCEEEEEECCCCcee-------------------------------------------------------
Confidence 357899999999999999876543
Q ss_pred cceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccC
Q psy18073 394 EYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473 (639)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~sp 473 (639)
..+.+|.+.|++++|+|++ .+|++|+.||.|++||+++++++..+..+ ..|..++|+|
T Consensus 209 --------------------~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~ 266 (340)
T 4aow_A 209 --------------------TNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSP 266 (340)
T ss_dssp --------------------EEECCCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECS
T ss_pred --------------------eEecCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCC
Confidence 4567899999999999999 99999999999999999999999988654 6899999999
Q ss_pred Cccccc
Q psy18073 474 AVETTD 479 (639)
Q Consensus 474 dg~~~~ 479 (639)
++..++
T Consensus 267 ~~~~~~ 272 (340)
T 4aow_A 267 NRYWLC 272 (340)
T ss_dssp SSSEEE
T ss_pred CCceee
Confidence 986543
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-33 Score=284.21 Aligned_cols=243 Identities=12% Similarity=0.089 Sum_probs=191.7
Q ss_pred cCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhcc--ccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEe
Q psy18073 125 KTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK--PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 202 (639)
Q Consensus 125 ~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd 202 (639)
...|..+.+.++.......+.+ +.+++|++.++ +.+..+.+|.+.|++++|+|++ ++|++|+.||+|++||
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYE 83 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSS------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC-
T ss_pred CCcEEEEEECCCCCEEEEecCC------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEE
Confidence 3466677777766655555444 35889999887 7889999999999999999999 9999999999999999
Q ss_pred CCCCc---eEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEe--cCCeeEEeeecCCCCEE
Q psy18073 203 LTSQS---CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTII--SKSVISSISHQRKSKIF 277 (639)
Q Consensus 203 ~~~~~---~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l 277 (639)
+.+++ ....+.+|...|.+++|+|++++|++++.|++|++||++++..... ...+. +...|.+++|+|++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV--SKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC--CEEECSSCCSCEEEEEECTTSSEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee--eeEeecccCCCeEEEEEcCCCCEE
Confidence 99877 6777889999999999999999999999999999999997653111 22222 56799999999999999
Q ss_pred EEcCC--eeEEEeCC------------------CCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccc
Q psy18073 278 ATCGD--QCQLWEHE------------------RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337 (639)
Q Consensus 278 ~~~~~--~i~vwd~~------------------~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~ 337 (639)
++++. .|++||++ .++++..+ +|.+.|.+++|+| ++++|++++.||+|++||+++++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCC
Confidence 99884 89999985 35566667 8999999999999 889999999999999999987654
Q ss_pred cCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccccc
Q psy18073 338 SRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLD 417 (639)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (639)
.. ..+..+.
T Consensus 240 ~~-----------------------------------------------------------------------~~~~~~~ 248 (377)
T 3dwl_C 240 PP-----------------------------------------------------------------------RALITVK 248 (377)
T ss_dssp CE-----------------------------------------------------------------------EECCCEE
T ss_pred cc-----------------------------------------------------------------------eeeEeec
Confidence 10 0015567
Q ss_pred CcccceeEEeeCCCCcceEEeccCCceEEEecCC
Q psy18073 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT 451 (639)
Q Consensus 418 ~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~ 451 (639)
+|...|.+++|+|++ .+|++|+.|+.+ +|+..
T Consensus 249 ~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 249 LSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CSSSCEEEEEEEETT-EEEEEESSSSEE-EECCC
T ss_pred CCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeC
Confidence 899999999999999 999999988877 55543
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-32 Score=273.09 Aligned_cols=291 Identities=11% Similarity=0.129 Sum_probs=208.9
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeC---CCcEEEEeCCCCceEEEE-eccCCceEEEEEcCC---CCEEEEEecCCe
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAY---DGEVKVWNLTSQSCVQTY-QAHDGHVRDVCFLPD---GSQFLSVGIDNT 239 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~---dg~i~vWd~~~~~~~~~~-~~h~~~V~~v~~sp~---~~~l~s~s~Dg~ 239 (639)
+.+.+|.+.|++++|+|++..++++|+. ||.|+|||+.+++..... .+|...|.+++|+|+ +++|++|+.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 4567899999999999999566677776 999999999998865543 379999999999998 699999999999
Q ss_pred EEEEeCCCCC-CCcccceEEEecCCeeEEe------eecCCCCEEEEcCC--eeEEEeCCCCc-eeeeeecCCc----cE
Q psy18073 240 IKTWSSELSE-SDHIVPLHTIISKSVISSI------SHQRKSKIFATCGD--QCQLWEHERNE-PIRAFSWNVD----SL 305 (639)
Q Consensus 240 i~iwd~~~~~-~~~~~~~~~~~~~~~v~~~------~~~~~~~~l~~~~~--~i~vwd~~~~~-~~~~~~~h~~----~v 305 (639)
|++||+.+++ .. .....+...|.++ +|+|++..+++++. .|++||+++++ ++..+..|.+ .|
T Consensus 92 i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 92 LHIWNLEAPEMPV----YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp EEEECTTSCSSCS----EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred EEEEeCCCCCccE----EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 9999999876 32 1222355688888 56889999999884 99999999987 7888876655 89
Q ss_pred EEEE----EcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccc
Q psy18073 306 HHVQ----FNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKL 381 (639)
Q Consensus 306 ~~v~----~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 381 (639)
.+++ |+| ++.+|++++.||.|++||+++++....... .. ....+.++|.+. .
T Consensus 168 ~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~------~v~~~~~~~~~~------------~ 223 (357)
T 3i2n_A 168 WTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNI-----KN------GVCSLEFDRKDI------------S 223 (357)
T ss_dssp EEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEEC-----SS------CEEEEEESCSSS------------S
T ss_pred EEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCC-----CC------ceEEEEcCCCCC------------C
Confidence 9998 678 889999999999999999998765322110 00 011123333100 1
Q ss_pred ceeeeeeeecCccceeeecccccccccccccccc-----ccCcccceeEEeeCCCCcc-eEEeccCCceEEEecCCcc--
Q psy18073 382 ERVFAKPFVGPREYVRALNATKLERVFAKPFVAN-----LDGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQ-- 453 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~h~~~v~~v~~sp~~~~-~l~sgs~Dg~v~iWd~~~~-- 453 (639)
+.. .+++..+.... .++......... +.+|...|++++|+|++ . +|++|+.||.|++||++++
T Consensus 224 ~~~---l~~~~~dg~i~-----i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 224 MNK---LVATSLEGKFH-----VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN-RELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp CCE---EEEEESTTEEE-----EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEEEEEEEECCSC
T ss_pred CCE---EEEECCCCeEE-----EEeCcCCCcccceeeeccCCCcCCEEEEEECCCC-CcEEEEEeCCCcEEEeecCCCcc
Confidence 111 11111111100 011111222233 34899999999999999 6 8999999999999999854
Q ss_pred -----------------ccceeeeeeccccccccccCCcccccccccccccC-ccccccCC
Q psy18073 454 -----------------SCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQHD 496 (639)
Q Consensus 454 -----------------~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~~d 496 (639)
+++..+.+|.+.|++++|+|+|+.++++ .+.++ .+.|.-..
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s--~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 295 RSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC--SSFDQTVRVLIVTK 353 (357)
T ss_dssp C--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE--EETTSEEEEEEECC
T ss_pred cccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE--ecCCCcEEEEECCC
Confidence 4667788999999999999999877643 23343 37776544
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-31 Score=270.77 Aligned_cols=234 Identities=17% Similarity=0.228 Sum_probs=207.0
Q ss_pred ccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeC
Q psy18073 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245 (639)
Q Consensus 166 ~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~ 245 (639)
...+.+|.+.|++++|+|++ .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.||+|++||+
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 35588999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCc-----------eeeeeecCCc--cE
Q psy18073 246 ELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNE-----------PIRAFSWNVD--SL 305 (639)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~-----------~~~~~~~h~~--~v 305 (639)
.+++. .....+...+.+++|+|++.++++++ +.|.+||+..+. .+..+..|.+ .+
T Consensus 104 ~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 104 SNGQC-----VATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp TTCCE-----EEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred CCCcE-----EEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 98665 44455778999999999999998876 489999998764 4455566666 99
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCc-cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccccee
Q psy18073 306 HHVQFNPIDKHILASCASDRSIILYDTRAT-VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERV 384 (639)
Q Consensus 306 ~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 384 (639)
.+++|+| ++++|++++.||.|++||++++ ..
T Consensus 179 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~----------------------------------------------- 210 (369)
T 3zwl_B 179 TVAGWST-KGKYIIAGHKDGKISKYDVSNNYEY----------------------------------------------- 210 (369)
T ss_dssp EEEEECG-GGCEEEEEETTSEEEEEETTTTTEE-----------------------------------------------
T ss_pred eEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEe-----------------------------------------------
Confidence 9999999 8899999999999999999762 22
Q ss_pred eeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecc
Q psy18073 385 FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464 (639)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~ 464 (639)
+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+..+. +..
T Consensus 211 ----------------------------~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~ 260 (369)
T 3zwl_B 211 ----------------------------VDSIDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVDVSTLQVLKKYE-TDC 260 (369)
T ss_dssp ----------------------------EEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEE-CSS
T ss_pred ----------------------------EEEEecCCCceeEEEECCCC-CEEEEecCCceEEEEECCCCceeeeec-CCC
Confidence 14566799999999999999 999999999999999999999999886 778
Q ss_pred ccccccccCCccccccccc
Q psy18073 465 HVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 465 ~v~~v~~spdg~~~~~~~~ 483 (639)
.+..++|+|++..++++..
T Consensus 261 ~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 261 PLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp CEEEEEECSSSSEEEEEEC
T ss_pred CceeEEecCCCceEEEeec
Confidence 9999999999988776643
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.3e-33 Score=280.98 Aligned_cols=285 Identities=15% Similarity=0.155 Sum_probs=226.4
Q ss_pred ccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc--cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEE
Q psy18073 124 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP--FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 201 (639)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vW 201 (639)
+...|..+.+.++.......+.+ +.+++|++.+++ .+..+.+|...|++++|+|++ .+|++|+.||.|++|
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEE
Confidence 34556666666665544443332 458899988877 889999999999999999999 899999999999999
Q ss_pred eCCCCceEEEE--eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEE
Q psy18073 202 NLTSQSCVQTY--QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFAT 279 (639)
Q Consensus 202 d~~~~~~~~~~--~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 279 (639)
|+.+++....+ ..|...|.+++|+|++++|++++.||.|++||++..............+...+.+++|+|++.++++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 99888755443 6799999999999999999999999999999998765321111111234578999999999999999
Q ss_pred cCC--eeEEEeC------------------CCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccC
Q psy18073 280 CGD--QCQLWEH------------------ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 280 ~~~--~i~vwd~------------------~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
++. .|++||+ ..++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+++++.+
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~- 237 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKKMAV- 237 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGTTEE-
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCCcee-
Confidence 874 9999995 46788889999999999999999 8899999999999999999876443
Q ss_pred CccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc
Q psy18073 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH 419 (639)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 419 (639)
..+.+|
T Consensus 238 --------------------------------------------------------------------------~~~~~~ 243 (372)
T 1k8k_C 238 --------------------------------------------------------------------------ATLASE 243 (372)
T ss_dssp --------------------------------------------------------------------------EEEECS
T ss_pred --------------------------------------------------------------------------EEEccC
Confidence 445678
Q ss_pred ccceeEEeeCCCCcceEEeccCCceEEEecCCc--cc--------------------------------cc------eee
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS--QS--------------------------------CV------QTY 459 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~--~~--------------------------------~~------~~l 459 (639)
..+|.+++|+|++ .++++| .||.|++|++.+ ++ .. ..+
T Consensus 244 ~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 244 TLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp SCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 8899999999999 888888 899999999987 42 10 333
Q ss_pred -eeecccccccccc-CCc---ccccccccccccCc-cccccCC
Q psy18073 460 -QAHDGHVRDTSTR-PAV---ETTDLTRSFGWESS-DAWQQHD 496 (639)
Q Consensus 460 -~~h~~~v~~v~~s-pdg---~~~~~~~~~~~~~~-~~~~~~d 496 (639)
.+|.++|++++|+ ++| ..++ +.+.|+. +.|....
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~---s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFC---TTGMDGGMSIWDVRS 361 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEE---EEETTSEEEEEEHHH
T ss_pred cccccCCcceeEEecCCCcceeeEE---EecCCCceEEEEecC
Confidence 4899999999966 665 4544 3455554 8886433
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-32 Score=278.82 Aligned_cols=292 Identities=14% Similarity=0.208 Sum_probs=228.4
Q ss_pred cccCccccccCCCC---CCCCCCCCchhHHHhhhhhhhhhhhcccccccccc-----ccccEEEEEECCC----CCeeEE
Q psy18073 123 ETKTSIHRIPRNID---PSLHPFEGPREYVRALNATKLERVFAKPFVANLDG-----HKDGISCLAKHPT----KLSTII 190 (639)
Q Consensus 123 ~~~~~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~-----H~~~V~~l~~sp~----~~~~l~ 190 (639)
.+...|..+.+.++ .....+.+ ..-+.+++|++.++..+..+.+ |.+.|++++|+|+ | .+|+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~-----~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~ 89 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFAT-----VGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSH-PLLA 89 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEE-----EETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCC-EEEE
T ss_pred CCCCceEEEEEecccCCCCceEEEE-----CCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCC-CEEE
Confidence 45667777766653 11111111 1113588999988887777765 4577999999999 6 7999
Q ss_pred EeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcccceEEE----ecCCee
Q psy18073 191 SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI----ISKSVI 265 (639)
Q Consensus 191 sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----~~~~~v 265 (639)
+|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++++|++++.||+|++||+++++. .... .+...|
T Consensus 90 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~v 164 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-----VAIFGGVEGHRDEV 164 (366)
T ss_dssp EEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-----EEEECSTTSCSSCE
T ss_pred EecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-----EEEecccccccCce
Confidence 999999999999999999999999999999999999 999999999999999999987654 2332 356799
Q ss_pred EEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeec----------------------------CCccEEEEEEcCCCC
Q psy18073 266 SSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSW----------------------------NVDSLHHVQFNPIDK 315 (639)
Q Consensus 266 ~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~----------------------------h~~~v~~v~~sp~~~ 315 (639)
.+++|+|++.++++++. .|++||+++++.+..+.. |...|.+++|+ +
T Consensus 165 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~ 241 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---G 241 (366)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---T
T ss_pred eEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---C
Confidence 99999999999999874 999999998876554443 99999999998 4
Q ss_pred cEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccc
Q psy18073 316 HILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395 (639)
Q Consensus 316 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 395 (639)
++|++++.||.|++||++++........
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~---------------------------------------------------- 269 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIK---------------------------------------------------- 269 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCC----------------------------------------------------
T ss_pred CEEEEEecCCEEEEEeCCCccccccccc----------------------------------------------------
Confidence 5999999999999999987644211000
Q ss_pred eeeeccccccccccccccccccCcccceeEEeeCCC--CcceEEeccCCceEEEecCCccccce----eeeee--ccccc
Q psy18073 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPT--KLSTIISGAYDGEVKVWNLTSQSCVQ----TYQAH--DGHVR 467 (639)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~~l~sgs~Dg~v~iWd~~~~~~~~----~l~~h--~~~v~ 467 (639)
........+..+.+|...|++++|+|+ + .+|++|+.||.|++||+.++++.. .+.+| .+.|+
T Consensus 270 ---------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~ 339 (366)
T 3k26_A 270 ---------PSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIR 339 (366)
T ss_dssp ---------TTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEE
T ss_pred ---------cCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceE
Confidence 000001123667889999999999999 8 999999999999999999987655 67777 78999
Q ss_pred cccccCCcccccccccccccC-ccccc
Q psy18073 468 DTSTRPAVETTDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 468 ~v~~spdg~~~~~~~~~~~~~-~~~~~ 493 (639)
+++|+|+|+.++.+. .++ ...|.
T Consensus 340 ~~~~s~~~~~l~s~~---~dg~i~iwd 363 (366)
T 3k26_A 340 QTSFSRDSSILIAVC---DDASIWRWD 363 (366)
T ss_dssp EEEECTTSSEEEEEE---TTSEEEEEE
T ss_pred EEEeCCCCCeEEEEe---CCCEEEEEE
Confidence 999999998776543 333 26664
No 60
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-31 Score=275.45 Aligned_cols=262 Identities=15% Similarity=0.218 Sum_probs=218.7
Q ss_pred hhhhhhhhhcccccccccc-ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE
Q psy18073 153 NATKLERVFAKPFVANLDG-HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~-H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l 231 (639)
+.+++|+..+++....+.. |...|++++|+|++ .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++| +++.|
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 189 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL 189 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence 4589999999888877766 89999999999999 89999999999999999999999999999999999999 56799
Q ss_pred EEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEE
Q psy18073 232 LSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQ 309 (639)
Q Consensus 232 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~ 309 (639)
++++.||.|++||++..... ......+...|.+++|+|++.++++++. .|++||+++++++..+.+|...|.+++
T Consensus 190 ~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 190 SSGSRSGAIHHHDVRIANHQ---IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp EEEETTSEEEEEETTSSSCE---EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE
T ss_pred EEEcCCCCEEEEecccCcce---eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE
Confidence 99999999999999854432 1222345679999999999999999884 999999999999999999999999999
Q ss_pred EcCCCCcEEEEEe--CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeee
Q psy18073 310 FNPIDKHILASCA--SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK 387 (639)
Q Consensus 310 ~sp~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 387 (639)
|+|++..++++|+ .||.|++||+++++.+
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~------------------------------------------------- 297 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARV------------------------------------------------- 297 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEE-------------------------------------------------
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEE-------------------------------------------------
Confidence 9997678888876 8999999999876543
Q ss_pred eeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe--ccCCceEEEecCCccccce--eeeeec
Q psy18073 388 PFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS--GAYDGEVKVWNLTSQSCVQ--TYQAHD 463 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s--gs~Dg~v~iWd~~~~~~~~--~l~~h~ 463 (639)
..+ .|...|.+++|+|++ .++++ |+.||.|++||+.+++... .+.+|.
T Consensus 298 --------------------------~~~-~~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~ 349 (401)
T 4aez_A 298 --------------------------NTV-DAGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD 349 (401)
T ss_dssp --------------------------EEE-ECSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS
T ss_pred --------------------------EEE-eCCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCC
Confidence 112 245679999999999 88888 6699999999999866554 467999
Q ss_pred cccccccccCCcccccccccccccC-ccccccCChHHH
Q psy18073 464 GHVRDTSTRPAVETTDLTRSFGWES-SDAWQQHDIQEL 500 (639)
Q Consensus 464 ~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~~d~~e~ 500 (639)
+.|.+++|+|+|..++.+ +.++ .+.|.-.+....
T Consensus 350 ~~v~~~~~s~dg~~l~s~---~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 350 TRVLYSALSPDGRILSTA---ASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SCCCEEEECTTSSEEEEE---CTTSEEEEEECCC----
T ss_pred CCEEEEEECCCCCEEEEE---eCCCcEEEEECCCCccc
Confidence 999999999999876654 3343 378876655443
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-32 Score=281.88 Aligned_cols=301 Identities=14% Similarity=0.198 Sum_probs=205.0
Q ss_pred hhhhhcccccccc-ccccccEEEEEECC-CCCeeEEEeeCCCcEEEEeCCC---Cc---eEEEEeccCCceEEEEEcCCC
Q psy18073 157 LERVFAKPFVANL-DGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTS---QS---CVQTYQAHDGHVRDVCFLPDG 228 (639)
Q Consensus 157 ~~~~~~~~~~~~l-~~H~~~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~---~~---~~~~~~~h~~~V~~v~~sp~~ 228 (639)
.|+ ..++++.++ ++|.+.|++++|+| ++ .+||+|+.||+|+|||+.+ +. ....+ +|.+.|++++|+|++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNF 123 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTS
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCC
Confidence 477 456778888 99999999999999 88 8999999999999999876 33 33334 499999999999999
Q ss_pred CEEEEEecCCeEEEEeCC---CCCCCcccceE---EEe-----cCCeeEEee--ecCCCCEEEEcCC--eeEEEeCCCCc
Q psy18073 229 SQFLSVGIDNTIKTWSSE---LSESDHIVPLH---TII-----SKSVISSIS--HQRKSKIFATCGD--QCQLWEHERNE 293 (639)
Q Consensus 229 ~~l~s~s~Dg~i~iwd~~---~~~~~~~~~~~---~~~-----~~~~v~~~~--~~~~~~~l~~~~~--~i~vwd~~~~~ 293 (639)
++|++|+.||+|++||+. ++........+ ... ....+.++. +++++.++++++. .|++||+++++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 999999999999999995 33322111111 111 234555555 5678999998884 99999999999
Q ss_pred eeeeeec--CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchh
Q psy18073 294 PIRAFSW--NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPRE 371 (639)
Q Consensus 294 ~~~~~~~--h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (639)
++..+.+ |.+.|.+++|+| ++.+|++|+.||+|++||+++++++..+...... .+..+.. ...+++.+.
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~--~~~~s~~~~--- 274 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA---PITHVEV--CQFYGKNSV--- 274 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE---EEEEEEE--CTTTCTTEE---
T ss_pred eeEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC---ceEEEEe--ccccCCCcc---
Confidence 9999998 899999999999 8999999999999999999998776543211111 1111100 001111111
Q ss_pred hhhhccccccceeeee-------eeecCccceeeeccccccccccccccccccC--cccceeEEeeCCCCcceEEeccCC
Q psy18073 372 YVRALNATKLERVFAK-------PFVGPREYVRALNATKLERVFAKPFVANLDG--HKDGISCLAKHPTKLSTIISGAYD 442 (639)
Q Consensus 372 ~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~~l~sgs~D 442 (639)
.+.+........++.. .+.+....+............ ....+.+ |...|++++|+ ++ .+|++|+.|
T Consensus 275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d 349 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL---EELNFCGIRSLNALSTISVS-ND-KILLTDEAT 349 (437)
T ss_dssp EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG---GGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGG
T ss_pred EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc---ccceecccccCCceEEEEEC-Cc-eEEEecCCC
Confidence 1111111111111100 000000000000000000000 0012445 88999999999 77 899999999
Q ss_pred ceEEEecCCccccceeeee-------------------------------------eccccccccccCC
Q psy18073 443 GEVKVWNLTSQSCVQTYQA-------------------------------------HDGHVRDTSTRPA 474 (639)
Q Consensus 443 g~v~iWd~~~~~~~~~l~~-------------------------------------h~~~v~~v~~spd 474 (639)
|.|++||+.+++++..+.+ |...|++++|+++
T Consensus 350 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 350 SSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp TEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEES
T ss_pred CeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeecc
Confidence 9999999999999888876 7889999999988
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.8e-32 Score=277.76 Aligned_cols=246 Identities=20% Similarity=0.265 Sum_probs=206.5
Q ss_pred hhhhhhhhhcc----ccccccccccccEEEEEECC-CCCeeEEEeeCCCcEEEEeCCCC-------ceEEEEeccCCceE
Q psy18073 153 NATKLERVFAK----PFVANLDGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQ-------SCVQTYQAHDGHVR 220 (639)
Q Consensus 153 ~~~~~~~~~~~----~~~~~l~~H~~~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~~-------~~~~~~~~h~~~V~ 220 (639)
+.+.+|++... ..+..+.+|.+.|++++|+| ++ .+|++|+.||+|+|||+.++ +++..+.+|.+.|.
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~ 135 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG 135 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE
Confidence 45788887543 34567889999999999999 77 89999999999999999987 67888999999999
Q ss_pred EEEEcCCC-CEEEEEecCCeEEEEeCCCCCCCcccceEEE---ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCce
Q psy18073 221 DVCFLPDG-SQFLSVGIDNTIKTWSSELSESDHIVPLHTI---ISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEP 294 (639)
Q Consensus 221 ~v~~sp~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~ 294 (639)
+++|+|++ ++|++++.||+|++||+.+++. ...+ .+...|.+++|+|++.++++++. .|++||+++++.
T Consensus 136 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 136 IVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-----VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp EEEECSSBTTEEEEEETTSCEEEEETTTTEE-----EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred EEEECcCCCCEEEEEcCCCEEEEEECCCCCc-----cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 99999998 6999999999999999997654 2333 25678999999999999998874 999999999999
Q ss_pred eeee-ecCCcc-EEEEEEcCCCCcEEEEE---eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCc
Q psy18073 295 IRAF-SWNVDS-LHHVQFNPIDKHILASC---ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGP 369 (639)
Q Consensus 295 ~~~~-~~h~~~-v~~v~~sp~~~~~l~s~---s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (639)
+..+ .+|.+. +.++.|+| ++.+|++| +.|+.|++||++++.....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~----------------------------- 260 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLS----------------------------- 260 (402)
T ss_dssp EEEEECSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSE-----------------------------
T ss_pred eeeeccCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCce-----------------------------
Confidence 9998 788876 89999999 88999999 7999999999987543100
Q ss_pred hhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceE-EeccCCceEEEe
Q psy18073 370 REYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVW 448 (639)
Q Consensus 370 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l-~sgs~Dg~v~iW 448 (639)
.....|...|.+++|+|++ .+| ++|+.||.|++|
T Consensus 261 --------------------------------------------~~~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 261 --------------------------------------------LQELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYF 295 (402)
T ss_dssp --------------------------------------------EEECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEE
T ss_pred --------------------------------------------EEeccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEE
Confidence 1112466779999999999 666 567789999999
Q ss_pred cCCcccc-ceeeeee--ccccccccccCCccccc
Q psy18073 449 NLTSQSC-VQTYQAH--DGHVRDTSTRPAVETTD 479 (639)
Q Consensus 449 d~~~~~~-~~~l~~h--~~~v~~v~~spdg~~~~ 479 (639)
|+.+++. +..+..| .++|.+++|+|++..++
T Consensus 296 d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 296 EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred EecCCCcceEeecccccCCcccceEEecccccce
Confidence 9999885 6666665 48999999999997754
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.2e-32 Score=304.53 Aligned_cols=278 Identities=22% Similarity=0.287 Sum_probs=222.4
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
..+.+.+|.+.|++++|+|+| .+||+|+.||.|+|||+.+++.+..+.+|.++|++++|+|++++|++++.||.|++||
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred cceeeecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 456789999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCC-ceeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERN-EPIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~-~~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
+.+++.. .....+...|.+++|+|++..+++++. .|++||++++ .....+.+|...|.+++|+|.++..|+++
T Consensus 84 ~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 84 YNTGEKV----VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp TTTCCEE----EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCCCcEE----EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 9987653 122235678999999999999998884 9999999987 67788899999999999999667899999
Q ss_pred eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecc
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
+.||+|++||+.++.....+...... ....+.|+|.. .+. ..++++.+...
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~---------~v~~~~~~~~~-------------~~~---~l~~~~~dg~i---- 210 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQER---------GVNYVDYYPLP-------------DKP---YMITASDDLTI---- 210 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTT---------CCCEEEECCST-------------TCC---EEEEECTTSEE----
T ss_pred eCCCeEEEEECCCCcceeEEecCCCC---------CEEEEEEEECC-------------CCC---EEEEEeCCCEE----
Confidence 99999999999876654332211100 01112222210 111 11111111111
Q ss_pred ccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccc
Q psy18073 402 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 402 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~ 478 (639)
..++......+..+.+|...|.+++|+|++ .+|++|+.||.|++||+.+++.+..+..|...+++++|+|+|..+
T Consensus 211 -~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 211 -KIWDYQTKSCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp -EEEETTTTEEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred -EEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 111222344457788999999999999999 899999999999999999999999999999999999999999753
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-31 Score=269.57 Aligned_cols=252 Identities=20% Similarity=0.306 Sum_probs=207.1
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC----ceEEEEeccCCceEEEEEcC--CCCEEEEEecCCeE
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----SCVQTYQAHDGHVRDVCFLP--DGSQFLSVGIDNTI 240 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~----~~~~~~~~h~~~V~~v~~sp--~~~~l~s~s~Dg~i 240 (639)
..+.||.+.|++++|+|++ .+||+|+.||.|+|||+.++ +.+..+.+|.+.|++++|+| ++++|++|+.||+|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 4567999999999999999 89999999999999999876 46777889999999999999 69999999999999
Q ss_pred EEEeCCCCCCCcc----cceEEE-ecCCeeEEeeecCC--CCEEEEcCC--eeEEEeCCCCceeeeee------------
Q psy18073 241 KTWSSELSESDHI----VPLHTI-ISKSVISSISHQRK--SKIFATCGD--QCQLWEHERNEPIRAFS------------ 299 (639)
Q Consensus 241 ~iwd~~~~~~~~~----~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~--~i~vwd~~~~~~~~~~~------------ 299 (639)
++||++++..... ...... .+...|.+++|+|+ +.++++++. .|++||+++++.+..+.
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999987643211 112222 45678999999999 998888874 89999999988665543
Q ss_pred -cCCccEEEEEEcCC--CCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 300 -WNVDSLHHVQFNPI--DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 300 -~h~~~v~~v~~sp~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
+|...+.+++|+|+ ++.++++++.|+.+.+|+...+...
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------------------------- 205 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLH-------------------------------------- 205 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEE--------------------------------------
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCcee--------------------------------------
Confidence 67889999999994 3889999999999988876554321
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCc---ceEEeccCCceEEEecCCcc
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKL---STIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~---~~l~sgs~Dg~v~iWd~~~~ 453 (639)
.+..+.+|...|++++|+|+++ .+|++|+.||.|++||++++
T Consensus 206 -----------------------------------~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 206 -----------------------------------VAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp -----------------------------------EEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred -----------------------------------eeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 0155678999999999999973 68999999999999999875
Q ss_pred ----------------------------------------------ccceeeeeeccccccccccCCccccccccccccc
Q psy18073 454 ----------------------------------------------SCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 454 ----------------------------------------------~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~ 487 (639)
+.+..+.+|.+.|++++|+|+|+.++.+ +.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~---~~d 327 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA---GDD 327 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE---ETT
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe---cCC
Confidence 6777888999999999999999766544 344
Q ss_pred C-ccccccC
Q psy18073 488 S-SDAWQQH 495 (639)
Q Consensus 488 ~-~~~~~~~ 495 (639)
+ .+.|...
T Consensus 328 g~v~iw~~~ 336 (351)
T 3f3f_A 328 GKVRLWKAT 336 (351)
T ss_dssp SCEEEEEEC
T ss_pred CcEEEEecC
Confidence 4 3777644
No 65
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.3e-31 Score=269.51 Aligned_cols=304 Identities=13% Similarity=0.163 Sum_probs=217.0
Q ss_pred hhhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhcc----ccccccccccccEEEEEECC--CCCeeEEEe
Q psy18073 119 EYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK----PFVANLDGHKDGISCLAKHP--TKLSTIISG 192 (639)
Q Consensus 119 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~l~~H~~~V~~l~~sp--~~~~~l~sg 192 (639)
.++..+...|..+.+.++.......+.+ ..+++|++.++ +.+..+.+|...|++++|+| ++ .+|++|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~ 77 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG-RIIASA 77 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCC------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC-CEEEEE
Confidence 3456677788888877776655544333 35888988765 46778899999999999999 57 899999
Q ss_pred eCCCcEEEEeCCCC---------ceEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcccceEEE--
Q psy18073 193 AYDGEVKVWNLTSQ---------SCVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-- 259 (639)
Q Consensus 193 s~dg~i~vWd~~~~---------~~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-- 259 (639)
+.||.|++||+.++ +.+..+.+|.+.|.+++|+|+ +++|++++.||.|++||+++++..........
T Consensus 78 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 78 SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 99999999999887 568888999999999999999 99999999999999999998776544432211
Q ss_pred -------ecCCeeEEeeecCC---CCEEEEcCC--eeEEEeCCCCce--eeeeecCCccEEEEEEcCCCC----cEEEEE
Q psy18073 260 -------ISKSVISSISHQRK---SKIFATCGD--QCQLWEHERNEP--IRAFSWNVDSLHHVQFNPIDK----HILASC 321 (639)
Q Consensus 260 -------~~~~~v~~~~~~~~---~~~l~~~~~--~i~vwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~----~~l~s~ 321 (639)
.+...+.+++|+|+ +..+++++. .+.+|+...++. +..+.+|...|.+++|+| ++ ++|++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~~~~~l~s~ 236 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP-SIGRWYQLIATG 236 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC-CSSCSSEEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC-CCCCcceEEEEE
Confidence 24457899999997 888888885 677777776664 777889999999999999 55 899999
Q ss_pred eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecc
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
+.||.|++||++.+.............. . ....+... ....+... ......
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~------~~~~~~~~------------------~~~~~~~~-~~~~~~ 287 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSN----M------FDNSADVD------------------MDAQGRSD-SNTEEK 287 (351)
T ss_dssp ETTSCEEEEEEEECC-----------------------------------------------------------------
T ss_pred cCCCeEEEEeCCCCcCccccCCccccee----c------cCCCcccc------------------cccccccc-ccccee
Confidence 9999999999987644322111000000 0 00000000 00000000 000001
Q ss_pred ccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeee
Q psy18073 402 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 460 (639)
Q Consensus 402 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~ 460 (639)
...+.......+..+.+|...|++++|+|++ .+|+||+.||.|++||+.+++.+..+.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCcchhhee
Confidence 1112222334557788999999999999999 999999999999999999887665553
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.4e-32 Score=273.89 Aligned_cols=263 Identities=12% Similarity=0.116 Sum_probs=211.1
Q ss_pred cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc--eEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCC
Q psy18073 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~ 246 (639)
+..|.++|++++|+|++ ++|++|+.||.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 44699999999999999 899999999999999999887 888999999999999999999999999999999999997
Q ss_pred CCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCce---ee-eeecCCccEEEEEEcCCCCcEEEE
Q psy18073 247 LSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEP---IR-AFSWNVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~---~~-~~~~h~~~v~~v~~sp~~~~~l~s 320 (639)
+++.... .....+...+.+++|+|++.++++++. .|++||++.++. .. ...+|...|.+++|+| ++++|++
T Consensus 83 ~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 159 (372)
T 1k8k_C 83 GRTWKPT--LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAA 159 (372)
T ss_dssp TTEEEEE--EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEE
T ss_pred CCeeeee--EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEE
Confidence 6542111 111235678999999999999999884 899999998873 23 3367899999999999 8899999
Q ss_pred EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeec
Q psy18073 321 CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALN 400 (639)
Q Consensus 321 ~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (639)
++.||.|++||++..........
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~--------------------------------------------------------- 182 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAP--------------------------------------------------------- 182 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCC---------------------------------------------------------
T ss_pred EcCCCCEEEEEcccccccccccc---------------------------------------------------------
Confidence 99999999999875432211000
Q ss_pred cccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccc
Q psy18073 401 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~ 480 (639)
..+..+......+..+.+|...|.+++|+|++ .+|++|+.||.|++||+++++++..+..|..+|.+++|+|++..++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 261 (372)
T 1k8k_C 183 TPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAA 261 (372)
T ss_dssp BTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE
T ss_pred cccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEE
Confidence 00000011122336677899999999999999 99999999999999999999999999999999999999999986654
Q ss_pred cccccccCccccccCC
Q psy18073 481 TRSFGWESSDAWQQHD 496 (639)
Q Consensus 481 ~~~~~~~~~~~~~~~d 496 (639)
+ .......|...+
T Consensus 262 ~---~d~~i~i~~~~~ 274 (372)
T 1k8k_C 262 G---HDCFPVLFTYDS 274 (372)
T ss_dssp E---TTSSCEEEEEET
T ss_pred E---eCCeEEEEEccC
Confidence 4 222336665433
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=260.39 Aligned_cols=285 Identities=15% Similarity=0.221 Sum_probs=215.7
Q ss_pred cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy18073 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKT 242 (639)
Q Consensus 163 ~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~i 242 (639)
.++++++.+|.+.|++++| |++ .+|++|+.||.|++||+.+++....+..|.+.|.+++|+|++++|++++.||.|++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 3567889999999999999 888 89999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEE
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s 320 (639)
|++......... .....+...+.++++ ++..+++++. .|++|| .++.+..+..|...|.+++|+|.+++++++
T Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 86 VPLFATSGEDPL-YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp EETTCCTTSCC--CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EEeeecCCCCcc-cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 999865432211 122345678999999 4667777764 999999 678889999999999999999877889999
Q ss_pred EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeec
Q psy18073 321 CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALN 400 (639)
Q Consensus 321 ~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (639)
++.||.|++||.... ...+... ....+..+.....+. +...+....+
T Consensus 161 ~~~d~~i~i~d~~~~--~~~~~~~------------------------~~~~i~~~~~~~~~~---~~~~~~dg~i---- 207 (313)
T 3odt_A 161 ASADKTIKLWQNDKV--IKTFSGI------------------------HNDVVRHLAVVDDGH---FISCSNDGLI---- 207 (313)
T ss_dssp EETTSCEEEEETTEE--EEEECSS------------------------CSSCEEEEEEEETTE---EEEEETTSEE----
T ss_pred EECCCCEEEEecCce--EEEEecc------------------------CcccEEEEEEcCCCe---EEEccCCCeE----
Confidence 999999999994332 1111100 011112222222222 1111111111
Q ss_pred cccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccc
Q psy18073 401 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~ 480 (639)
..++......+..+.+|.+.|++++|+|++ .|++|+.||.|++||+.+++++..+..|...|.+++|+|+|..++
T Consensus 208 --~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 282 (313)
T 3odt_A 208 --KLVDMHTGDVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIV- 282 (313)
T ss_dssp --EEEETTTCCEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEE-
T ss_pred --EEEECCchhhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEE-
Confidence 112222345567788999999999999998 488999999999999999999999999999999999999997432
Q ss_pred cccccccC-ccccccC
Q psy18073 481 TRSFGWES-SDAWQQH 495 (639)
Q Consensus 481 ~~~~~~~~-~~~~~~~ 495 (639)
.+.++ .+.|...
T Consensus 283 ---~~~dg~i~iw~~~ 295 (313)
T 3odt_A 283 ---GSSDNLVRIFSQE 295 (313)
T ss_dssp ---EETTSCEEEEESC
T ss_pred ---EeCCCcEEEEeCC
Confidence 22333 3777643
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-32 Score=285.12 Aligned_cols=261 Identities=11% Similarity=0.076 Sum_probs=184.4
Q ss_pred hhhhhhhhhcccc-----------ccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC-ceEEEEeccCCceE
Q psy18073 153 NATKLERVFAKPF-----------VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ-SCVQTYQAHDGHVR 220 (639)
Q Consensus 153 ~~~~~~~~~~~~~-----------~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~-~~~~~~~~h~~~V~ 220 (639)
+.+++|++..+.. ..++.+|...|++++|+|++ .|++|+.||+|++||+.++ .+...+.+|.+.|+
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~ 312 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL 312 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEE
Confidence 4688999876532 24688999999999999864 7999999999999999876 45567899999999
Q ss_pred EE--EEcCCC-CEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCcee
Q psy18073 221 DV--CFLPDG-SQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPI 295 (639)
Q Consensus 221 ~v--~~sp~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~ 295 (639)
+| +|+|++ ++|||||.|++|+|||+++++....+ ........+.+++|+|++..++++++ +|++||++++.++
T Consensus 313 sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~--~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 313 SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT--VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE--EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc--ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 99 578887 89999999999999999875543211 11111124789999999998888775 8999999999998
Q ss_pred eeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 296 RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 296 ~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
..+.+|.+.|++|+|+| ++.+|+||+.||+|++||+..+ ........... ........+.++|.+.
T Consensus 391 ~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~-----~~~~~v~~v~~sp~g~------- 456 (524)
T 2j04_B 391 HPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAARR-LLHGIKNSSAT-----QKSLRLWKWDYSIKDD------- 456 (524)
T ss_dssp EEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCSS-TTTCC-----------CCCCEEEECBCCSSSC-------
T ss_pred eeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechHh-hccccccCccc-----eeeeEEEEeccCCCCC-------
Confidence 99999999999999999 8889999999999999998653 22111000000 0000001233333332
Q ss_pred ccccccceeeeeeeecCccceeeeccccccccc--cccccccccCcccceeEEeeCCCCc--ceEEeccCCceEEEecCC
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPTKL--STIISGAYDGEVKVWNLT 451 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~v~~sp~~~--~~l~sgs~Dg~v~iWd~~ 451 (639)
.+. .........+ .+..+..+.+|...|.+|+|+|+++ .++|+|+.||+||||++.
T Consensus 457 -------------------~~~-~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 457 -------------------KYR-IDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp -------------------EEE-ECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred -------------------eEE-ccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 110 0000111111 2445578899999999999999961 499999999999999975
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=2.3e-31 Score=275.56 Aligned_cols=258 Identities=16% Similarity=0.201 Sum_probs=212.4
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
+.+++|+..+++....+.+| ..+....|+|++ .+|++|+.||.|++||+.+++....+.+|.+.|++++|+|++++|+
T Consensus 78 ~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 155 (420)
T 3vl1_A 78 GHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI 155 (420)
T ss_dssp TEEEEEECCSEETTTTSCSC-CEEEEEEECSSS-CEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE
T ss_pred CcEEEEEecccceeeEEecC-CceEEEEEecCC-CEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE
Confidence 46889999998888888877 556666889999 8999999999999999999999888889999999999999999999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeec---CCccEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSW---NVDSLHH 307 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~---h~~~v~~ 307 (639)
+|+.||+|++||+.+++... ....+...|.+++|+|++.++++++. .|++||+++++.+..+.. |...|.+
T Consensus 156 s~s~d~~i~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~ 231 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKDGSNPR----TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNS 231 (420)
T ss_dssp EEETTSEEEEEETTTCCCCE----EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEE
T ss_pred EEeCCCeEEEEeCCCCcCce----EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccE
Confidence 99999999999999876642 22345679999999999999998884 899999999999988875 3445555
Q ss_pred EE---------------------EcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCC
Q psy18073 308 VQ---------------------FNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPF 366 (639)
Q Consensus 308 v~---------------------~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (639)
++ |+| ++++|++|+.||.|++||+++++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~--------------------------- 283 (420)
T 3vl1_A 232 IALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTI--------------------------- 283 (420)
T ss_dssp EEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEE---------------------------
T ss_pred EEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeE---------------------------
Confidence 54 577 78899999999999999998765331
Q ss_pred CCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcc-eEEeccCCceE
Q psy18073 367 EGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEV 445 (639)
Q Consensus 367 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-~l~sgs~Dg~v 445 (639)
....+|...|.+++|+|++ . +|++|+.||.|
T Consensus 284 -----------------------------------------------~~~~~~~~~v~~~~~~~~~-~~~l~~g~~dg~i 315 (420)
T 3vl1_A 284 -----------------------------------------------QLPSKFTCSCNSLTVDGNN-ANYIYAGYENGML 315 (420)
T ss_dssp -----------------------------------------------EECCTTSSCEEEEEECSSC-TTEEEEEETTSEE
T ss_pred -----------------------------------------------EcccccCCCceeEEEeCCC-CCEEEEEeCCCeE
Confidence 2234688899999999999 6 99999999999
Q ss_pred EEecCCcccc-ceeeee-eccccccccccCCcccccccccccccC-ccccccCC
Q psy18073 446 KVWNLTSQSC-VQTYQA-HDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQHD 496 (639)
Q Consensus 446 ~iWd~~~~~~-~~~l~~-h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~~d 496 (639)
++||+++++. +..+.+ |...|..+.| |++..++. .+.+. .+.|...+
T Consensus 316 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s---~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 316 AQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVS---SGFDTSIKLDIISD 365 (420)
T ss_dssp EEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEE---ETTTEEEEEEEECC
T ss_pred EEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEE---ecCCccEEEEeccC
Confidence 9999999755 778887 5667888755 56654443 34554 37886544
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.98 E-value=3.2e-31 Score=265.97 Aligned_cols=283 Identities=19% Similarity=0.268 Sum_probs=227.0
Q ss_pred hhhcccCccccccCCCCCC-CCCCCCchhHHHhhhhhhhhhhhccc-----cccccccccccEEEEEECCCCCeeEEEee
Q psy18073 120 YLRETKTSIHRIPRNIDPS-LHPFEGPREYVRALNATKLERVFAKP-----FVANLDGHKDGISCLAKHPTKLSTIISGA 193 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~-----~~~~l~~H~~~V~~l~~sp~~~~~l~sgs 193 (639)
.++.|...|..+.+.++.. ++...+.+ ..+++|++...+ +.+++.+|.+.|.+++|+|+| .+|++|+
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D------~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~ 105 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRD------KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG-QFALSGS 105 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETT------SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCC------CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC-CEEEEEc
Confidence 3667888999998887643 33333333 358899876543 567889999999999999999 9999999
Q ss_pred CCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCC
Q psy18073 194 YDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRK 273 (639)
Q Consensus 194 ~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 273 (639)
.||.|++|+............+...+..+.+++++.+|++++.|+.+++||+...... ......+...+..++++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~---~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY---TVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE---EECSSSCSSCEEEEEECSC
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE---EEEeccccCcccceEEccC
Confidence 9999999999999998888889999999999999999999999999999998754321 0111123467888888876
Q ss_pred C--CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccc
Q psy18073 274 S--KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETK 349 (639)
Q Consensus 274 ~--~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 349 (639)
+ .++++++. .|++||+++++.+..+.+|.+.|.+++|+| ++++|++|+.||+|++||+++.+.+
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~----------- 250 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHL----------- 250 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEE-----------
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCcee-----------
Confidence 4 56666653 999999999999999999999999999999 8999999999999999999876543
Q ss_pred cccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeC
Q psy18073 350 TSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKH 429 (639)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 429 (639)
..+. +...|.+++|+
T Consensus 251 ----------------------------------------------------------------~~~~-~~~~v~~~~~~ 265 (340)
T 4aow_A 251 ----------------------------------------------------------------YTLD-GGDIINALCFS 265 (340)
T ss_dssp ----------------------------------------------------------------EEEE-CSSCEEEEEEC
T ss_pred ----------------------------------------------------------------eeec-CCceEEeeecC
Confidence 1222 34578999999
Q ss_pred CCCcceEEeccCCceEEEecCCccccceeee---------eeccccccccccCCcccccccccccccC-cccccc
Q psy18073 430 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ---------AHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 430 p~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~---------~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
|++ .+++++.|+.|++||++++..+..+. +|...|++++|+|||+.++.+ +.|+ .+.|+.
T Consensus 266 ~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg---s~Dg~v~iW~~ 335 (340)
T 4aow_A 266 PNR--YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG---YTDNLVRVWQV 335 (340)
T ss_dssp SSS--SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE---ETTSCEEEEEE
T ss_pred CCC--ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE---eCCCEEEEEeC
Confidence 987 45667789999999999887766553 678899999999999876543 3444 377864
No 71
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=8.5e-32 Score=281.25 Aligned_cols=288 Identities=14% Similarity=0.200 Sum_probs=210.5
Q ss_pred ccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc-----------ccccccccc------------ccEEEEE
Q psy18073 124 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP-----------FVANLDGHK------------DGISCLA 180 (639)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----------~~~~l~~H~------------~~V~~l~ 180 (639)
....|..+.+.++.......+.+ +.+++|++.++. ++..+.+|. +.|++++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKG------GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETT------SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred ccCcEEEEEECCCCCEEEEEcCC------CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 44667777777776666554444 347888887766 578899998 8899999
Q ss_pred ECCCCC-eeEEEeeCCCcEEEEeCCCCceE---------------------------------------EE-EeccCCce
Q psy18073 181 KHPTKL-STIISGAYDGEVKVWNLTSQSCV---------------------------------------QT-YQAHDGHV 219 (639)
Q Consensus 181 ~sp~~~-~~l~sgs~dg~i~vWd~~~~~~~---------------------------------------~~-~~~h~~~V 219 (639)
|+|++. .+|++|+.||+|++||+.++... .. ..+|...|
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 999973 48999999999999998764432 12 36799999
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEeCCCCCCC-ccc---ceEEEecCCeeEEeeecCCC-CEEEEcCC--eeEEEeCCCC
Q psy18073 220 RDVCFLPDGSQFLSVGIDNTIKTWSSELSESD-HIV---PLHTIISKSVISSISHQRKS-KIFATCGD--QCQLWEHERN 292 (639)
Q Consensus 220 ~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~--~i~vwd~~~~ 292 (639)
.+++|+|++++|++| .|++|++||+++.... ... +.....+...|.+++|+|++ .++++++. .|++||++++
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 999999999999998 7999999999843221 000 00011345689999999998 88888874 9999999998
Q ss_pred ce----eeeeecCCc------------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCC-ccccCCccccccccccccccc
Q psy18073 293 EP----IRAFSWNVD------------SLHHVQFNPIDKHILASCASDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRI 355 (639)
Q Consensus 293 ~~----~~~~~~h~~------------~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~ 355 (639)
+. +..+.+|.. .|.+++|+| ++++|++++. |.|++||+++ ++++..+........
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~------ 331 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS------ 331 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT------
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc------
Confidence 87 788888876 999999999 8999999998 9999999986 554432211000000
Q ss_pred cCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccc-cCcccceeEEeeCCCCcc
Q psy18073 356 PRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPTKLS 434 (639)
Q Consensus 356 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~ 434 (639)
.+.... ......+..++|+|++ .
T Consensus 332 -------------------------------------------------------~l~~~~~~~~i~~~~~~~~s~~~-~ 355 (447)
T 3dw8_B 332 -------------------------------------------------------KLCSLYENDCIFDKFECCWNGSD-S 355 (447)
T ss_dssp -------------------------------------------------------THHHHHHTSGGGCCCCEEECTTS-S
T ss_pred -------------------------------------------------------cccccccccccccceEEEECCCC-C
Confidence 000000 0001123459999999 9
Q ss_pred eEEeccCCceEEEecCCccccceeeeee---------------------------------ccccccccccCCccccccc
Q psy18073 435 TIISGAYDGEVKVWNLTSQSCVQTYQAH---------------------------------DGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 435 ~l~sgs~Dg~v~iWd~~~~~~~~~l~~h---------------------------------~~~v~~v~~spdg~~~~~~ 481 (639)
+|++|+.||.|++||+.+++.+. +.+| ...|..++|+|+|..++++
T Consensus 356 ~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~ 434 (447)
T 3dw8_B 356 VVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVA 434 (447)
T ss_dssp EEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEE
T ss_pred EEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEE
Confidence 99999999999999999887653 3222 3468889999999988876
Q ss_pred cc
Q psy18073 482 RS 483 (639)
Q Consensus 482 ~~ 483 (639)
.+
T Consensus 435 ~~ 436 (447)
T 3dw8_B 435 TT 436 (447)
T ss_dssp CS
T ss_pred ec
Confidence 54
No 72
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=5.2e-32 Score=273.92 Aligned_cols=285 Identities=8% Similarity=0.026 Sum_probs=195.0
Q ss_pred ccEEEEEECCCCCeeEEEeeCCC-------cEEEEeCCCCce----------EEEEeccCCceEEEEEcCCCCEEEEEe-
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDG-------EVKVWNLTSQSC----------VQTYQAHDGHVRDVCFLPDGSQFLSVG- 235 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg-------~i~vWd~~~~~~----------~~~~~~h~~~V~~v~~sp~~~~l~s~s- 235 (639)
-||++++|+||| ++||+|+.|. +|++|++..+.. ...+.+|...|.+++++ ++.+++|+
T Consensus 15 ~PV~sv~fs~dg-~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNND-TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETT-EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCEEEEEEeCCC-cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 489999999999 9999998654 599999876431 12456888899988775 55666654
Q ss_pred ----------cCCeEEEEeCCCCCCCcccceEE------EecCCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCcee
Q psy18073 236 ----------IDNTIKTWSSELSESDHIVPLHT------IISKSVISSISHQRKSKIFATCG----DQCQLWEHERNEPI 295 (639)
Q Consensus 236 ----------~Dg~i~iwd~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~ 295 (639)
.|+++++|++........ .... ......+.+++|+|||+++++++ +.|+|||+++++++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLE-FLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEE-EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEE-EeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 577899999876443211 0111 11234588999999999987544 28999999999998
Q ss_pred eeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 296 RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 296 ~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
..+. |.+.|.+++|+| +++++++++.| .+++|+..++....... ...+...+..
T Consensus 171 ~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~-----------------------~~~~~~~v~~ 224 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKT-----------------------DFDKNWSLSK 224 (365)
T ss_dssp EEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEEC-----------------------CCCTTEEEEE
T ss_pred EEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeee-----------------------cCCCCCCEEE
Confidence 8886 778899999999 89999998854 57777776665432110 0011112222
Q ss_pred ccccccceeeeeeeecCccceeeecccccccccc--ccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcc
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVFA--KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
+.+...+..+......+...+.. ..++..... ......+.+|..+|++++|+|+| ++||+|+.||+|+|||+.++
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVL--TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEE--EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTT
T ss_pred EEEcCCCCEEEEEecCCcceeEE--eecccccceecceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCC
Confidence 23333333322222211111100 011111111 11235678899999999999999 99999999999999999999
Q ss_pred ccceee-eeeccccccccccCCcccccccccccccCc-ccccc
Q psy18073 454 SCVQTY-QAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQ 494 (639)
Q Consensus 454 ~~~~~l-~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~ 494 (639)
+++.++ .+|.++|++|+|||||+.++. .+.|.. ++|..
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~~laS---~S~D~tvrvw~i 341 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDSTYVAS---VSAANTIHIIKL 341 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSCEEEE---EETTSEEEEEEC
T ss_pred cEEEEecCcccCCEEEEEECCCCCEEEE---EeCCCeEEEEEc
Confidence 999885 799999999999999987654 445654 88864
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.2e-30 Score=307.48 Aligned_cols=294 Identities=17% Similarity=0.203 Sum_probs=226.3
Q ss_pred ccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeC
Q psy18073 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245 (639)
Q Consensus 166 ~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~ 245 (639)
...+.+|.+.|++++|+|+| ++||+|+.||+|+|||+.+++.+..+.+|.+.|.+++|+|++++|++++.||+|++||+
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 34677999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccceEEEecCCeeEEeeecC--CCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 246 ELSESDHIVPLHTIISKSVISSISHQR--KSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
.+++.. .....+...|.+++|+| ++.++++++. .|++||+++++++..+.+|.+.|.+++|+| ++.+|+++
T Consensus 687 ~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~ 761 (1249)
T 3sfz_A 687 ATGKLV----HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASC 761 (1249)
T ss_dssp TTCCEE----EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEE
T ss_pred CCCceE----EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEE
Confidence 987653 22224567999999999 5567888774 899999999999999999999999999999 88999999
Q ss_pred eCCCcEEEEECCCccccCCcccccccccc---ccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceee
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKT---SIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRA 398 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (639)
+.||+|++||++++.....+......... ..........+.|+|++. .+.. +....+.
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~---------------~l~~---~~~~~v~- 822 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD---------------KIIV---AAKNKVL- 822 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS---------------EEEE---EETTEEE-
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC---------------EEEE---EcCCcEE-
Confidence 99999999999987655433211100000 000000112233444333 2111 1111111
Q ss_pred ecccccccccccccccc-ccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCccc
Q psy18073 399 LNATKLERVFAKPFVAN-LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVET 477 (639)
Q Consensus 399 ~~~~~~~~~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~ 477 (639)
.+.......+.. ..+|...|.+++|+|++ .++++|+.||.|++||+.++..+..+.+|.+.|.+++|+|+|..
T Consensus 823 -----~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 896 (1249)
T 3sfz_A 823 -----LFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSS 896 (1249)
T ss_dssp -----EEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred -----EEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCE
Confidence 111111222222 34899999999999999 99999999999999999999999999999999999999999987
Q ss_pred ccccccccccC-ccccc
Q psy18073 478 TDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 478 ~~~~~~~~~~~-~~~~~ 493 (639)
++.+. .++ .+.|.
T Consensus 897 l~s~s---~dg~v~vw~ 910 (1249)
T 3sfz_A 897 FLTAS---DDQTIRVWE 910 (1249)
T ss_dssp EEEEE---TTSCEEEEE
T ss_pred EEEEe---CCCeEEEEE
Confidence 65443 333 36674
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.7e-32 Score=303.53 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=165.1
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEe
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 202 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd 202 (639)
.+...|..+.+.++..+....+.+ ..+++|+....+.+..+. |..+|.+++|+| | .+|++++.|++|+|||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~D------g~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVT------GEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-G-IYLVVINAKDTVYVLS 85 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETT------SEEEEECSTTCEEEEECS-SCCCEEEEEEET-T-TEEEEEETTCEEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCC------CEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-C-CEEEEEECcCeEEEEE
Confidence 345667777777777665554444 357889887776665554 889999999999 7 7999999999999999
Q ss_pred CCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccce--------EEEecCCeeEEeeecCC-
Q psy18073 203 LTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPL--------HTIISKSVISSISHQRK- 273 (639)
Q Consensus 203 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~- 273 (639)
+.+++++..+. |.+.|++++|+|++++|++|+.||+|++||++++... .... ....+.+.|.+++|+|+
T Consensus 86 ~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 86 LYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp TTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred CCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCC
Confidence 99999998886 7789999999999999999999999999999875431 0000 00124568999999996
Q ss_pred CCEEEEcCC--eeEEEeCCCCceeeeeecC------------------CccEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 274 SKIFATCGD--QCQLWEHERNEPIRAFSWN------------------VDSLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 274 ~~~l~~~~~--~i~vwd~~~~~~~~~~~~h------------------~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
+..+++|+. .| +||+++++++..+.+| ...|.+++|+| ++.+|++|+.||+|++||++
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECC
Confidence 467777764 88 9999999998888766 57899999999 89999999999999999999
Q ss_pred Ccccc
Q psy18073 334 ATVLS 338 (639)
Q Consensus 334 ~~~~~ 338 (639)
+++++
T Consensus 242 ~g~~~ 246 (902)
T 2oaj_A 242 SGHMI 246 (902)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 88764
No 75
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-31 Score=271.10 Aligned_cols=255 Identities=9% Similarity=0.021 Sum_probs=187.4
Q ss_pred CCchhHHHhhh-----hhhhhhhhccccccccc-cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccC
Q psy18073 143 EGPREYVRALN-----ATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 216 (639)
Q Consensus 143 ~~~~~~v~~~~-----~~~~~~~~~~~~~~~l~-~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~ 216 (639)
.+|...|..+. .++.|++.+++....+. +|...|.+++|||+| .+||+++.||.|+|||..+ ++..+. |.
T Consensus 49 ~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l~-~~ 124 (588)
T 2j04_A 49 NCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNLD-SK 124 (588)
T ss_dssp SSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEECC-CS
T ss_pred cCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeecc-CC
Confidence 34555544441 35666666555444444 678999999999999 9999999999999999544 666677 76
Q ss_pred C-----ceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcc--cceEEE-----ecCCeeEEeeecCCCCEEEEcCC-e
Q psy18073 217 G-----HVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHI--VPLHTI-----ISKSVISSISHQRKSKIFATCGD-Q 283 (639)
Q Consensus 217 ~-----~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~--~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~-~ 283 (639)
. .|.+++|||||++||+|+.||+|+|||+.++..... .....+ .+...|.+++|+|+| +++++.+ .
T Consensus 125 ~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~t 203 (588)
T 2j04_A 125 GNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNS 203 (588)
T ss_dssp SCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCC
T ss_pred CccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCe
Confidence 6 499999999999999999999999999997643111 123332 234589999999999 6666655 9
Q ss_pred eEEEeCCCCce---eeee-ecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCC
Q psy18073 284 CQLWEHERNEP---IRAF-SWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNI 359 (639)
Q Consensus 284 i~vwd~~~~~~---~~~~-~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (639)
|++||+..+.. .+++ .+|...|.+++|+ ++.||+++ ||+|++||+.+++...
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~-------------------- 259 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISS-------------------- 259 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEE--------------------
T ss_pred EEEEECCCCccccceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEE--------------------
Confidence 99999988774 3567 4788999999998 37899887 7999999998765420
Q ss_pred CCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEee--CCCCcceEE
Q psy18073 360 DPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAK--HPTKLSTII 437 (639)
Q Consensus 360 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--sp~~~~~l~ 437 (639)
...||.+.|..++| +|++ ..++
T Consensus 260 -------------------------------------------------------~~~gh~~~V~~va~~~s~d~-~~La 283 (588)
T 2j04_A 260 -------------------------------------------------------LKTGSLENFHIIPLNHEKES-TILL 283 (588)
T ss_dssp -------------------------------------------------------EECSCCSCCCEEEETTCSSC-EEEE
T ss_pred -------------------------------------------------------EEcCCCceEEEEEeeeCCCC-CEEE
Confidence 11256777777777 7777 6777
Q ss_pred eccCCceEEEecCC-----------------------ccccceeeeeeccccccccccCCcccccccccc
Q psy18073 438 SGAYDGEVKVWNLT-----------------------SQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSF 484 (639)
Q Consensus 438 sgs~Dg~v~iWd~~-----------------------~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~ 484 (639)
+++.||+ ++|..+ .+..+..+++ ...|.+++|||||+.+|++...
T Consensus 284 ~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 284 MSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp ECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEEE
T ss_pred EEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEec
Confidence 7777777 666542 1223444434 5679999999999988877555
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.1e-30 Score=274.18 Aligned_cols=256 Identities=17% Similarity=0.272 Sum_probs=215.0
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEc--CCCCE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL--PDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~s--p~~~~ 230 (639)
+.+++|++.+++.+.++.+|.+.|.+++|+|++ +|++|+.||+|++||+.+++++..+.+|.+.|.+++|+ +++.+
T Consensus 142 g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~ 219 (464)
T 3v7d_B 142 KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKY 219 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEE
T ss_pred CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCE
Confidence 468999999999999999999999999999986 89999999999999999999999999999999999998 58899
Q ss_pred EEEEecCCeEEEEeCCCCCCCcccc------------------eE-EEecCCeeEEeeecCCCCEEEEcCC--eeEEEeC
Q psy18073 231 FLSVGIDNTIKTWSSELSESDHIVP------------------LH-TIISKSVISSISHQRKSKIFATCGD--QCQLWEH 289 (639)
Q Consensus 231 l~s~s~Dg~i~iwd~~~~~~~~~~~------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~ 289 (639)
+++|+.||+|++||+.+........ .. ...+...+.++ ++++.++++++. .|++||+
T Consensus 220 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~ 297 (464)
T 3v7d_B 220 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDV 297 (464)
T ss_dssp EEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEET
T ss_pred EEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEEC
Confidence 9999999999999998765432110 11 11233455555 677888888874 9999999
Q ss_pred CCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCc
Q psy18073 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGP 369 (639)
Q Consensus 290 ~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (639)
++++++..+.+|...|.+++|+| +++++++|+.||+|++||+++++++
T Consensus 298 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~------------------------------- 345 (464)
T 3v7d_B 298 AQMKCLYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELM------------------------------- 345 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEE-------------------------------
T ss_pred CCCcEEEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEE-------------------------------
Confidence 99999999999999999999999 8899999999999999999876543
Q ss_pred hhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEec
Q psy18073 370 REYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449 (639)
Q Consensus 370 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd 449 (639)
..+.+|...|.+++|+ + .+|++|+.||+|++||
T Consensus 346 --------------------------------------------~~~~~h~~~v~~~~~~--~-~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 346 --------------------------------------------YTLQGHTALVGLLRLS--D-KFLVSAAADGSIRGWD 378 (464)
T ss_dssp --------------------------------------------EEECCCSSCEEEEEEC--S-SEEEEEETTSEEEEEE
T ss_pred --------------------------------------------EEEeCCCCcEEEEEEc--C-CEEEEEeCCCcEEEEE
Confidence 5567899999999998 4 7899999999999999
Q ss_pred CCccccceeeeeeccccccccccCCcccccccccccccCccccccC
Q psy18073 450 LTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQH 495 (639)
Q Consensus 450 ~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~~ 495 (639)
+.++...... .|...+..++|+|++..++.+. ......|.-.
T Consensus 379 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~---dg~i~iwd~~ 420 (464)
T 3v7d_B 379 ANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS---ENQFNIYNLR 420 (464)
T ss_dssp TTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE---TTEEEEEETT
T ss_pred CCCCceeeee-cCCCCccEEEEEeCCCEEEEec---CCeEEEEECC
Confidence 9998776665 4667888899999998766543 2334777643
No 77
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=1.7e-31 Score=277.65 Aligned_cols=301 Identities=9% Similarity=0.015 Sum_probs=213.0
Q ss_pred ccCccccccCCCC-CCCCCCCCchhHHHhhhhhhhhhhhcccc--ccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 124 TKTSIHRIPRNID-PSLHPFEGPREYVRALNATKLERVFAKPF--VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 124 ~~~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+...|..+.+++. +.+...++.+ +.+++||+.+++. ...+.||.+.|++|+|+|.+..+|+||+.||+|+|
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKG------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETT------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCC------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3445677777663 3344333333 3588999876653 45667999999999999843389999999999999
Q ss_pred EeCCCCceEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCC-EE
Q psy18073 201 WNLTSQSCVQTYQA--HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSK-IF 277 (639)
Q Consensus 201 Wd~~~~~~~~~~~~--h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 277 (639)
||+.++........ +...+.+++|+|++++|++|+.||+|++||++.. ....+ ..+...|.+++|+|++. ++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~----~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL----RMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS----BCCSSCEEEEEECTTCSSEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE----ecccceEEeeeecCCCceEE
Confidence 99987654433333 3446889999999999999999999999999753 32222 23467899999999876 66
Q ss_pred EEcCC--eeEEEeCCCCceeee---eecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccccccccc
Q psy18073 278 ATCGD--QCQLWEHERNEPIRA---FSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSI 352 (639)
Q Consensus 278 ~~~~~--~i~vwd~~~~~~~~~---~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 352 (639)
++++. .|++||+++++.... ..+|...|.+++|+| ++.+|++|+.||+|++||++++.....+........
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~--- 342 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF--- 342 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC---
T ss_pred EEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEeccccccc---
Confidence 66653 899999988765443 367999999999999 899999999999999999998765432211000000
Q ss_pred ccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCC
Q psy18073 353 HRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTK 432 (639)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 432 (639)
. .. ..+.........+..+.+++++
T Consensus 343 ---------------~--------------------------~~--------------~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 343 ---------------Q--------------------------HL--------------TPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp ---------------S--------------------------SS--------------CCCBCEECSSSSCEEEECCCCT
T ss_pred ---------------c--------------------------cc--------------eeEEEEEcCCCCEEEEEEcCCC
Confidence 0 00 0001111233445667788888
Q ss_pred cceEEeccCCceEEEecCCccccceeee-eeccccccc-cccCCcccccccccccccCccccccCCh
Q psy18073 433 LSTIISGAYDGEVKVWNLTSQSCVQTYQ-AHDGHVRDT-STRPAVETTDLTRSFGWESSDAWQQHDI 497 (639)
Q Consensus 433 ~~~l~sgs~Dg~v~iWd~~~~~~~~~l~-~h~~~v~~v-~~spdg~~~~~~~~~~~~~~~~~~~~d~ 497 (639)
..++++++.++.|++||..+|+.+..+. +|...|.++ +|+|+|..++.+ +.+..+.|..++.
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg---~d~~i~iW~~~~g 431 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASA---MGYHILIWSQQEA 431 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEE---CSSEEEECCCC--
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEE---cCCcEEEEECCcC
Confidence 3445555667789999999999998875 678889988 699999877643 2234588876654
No 78
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=3.6e-31 Score=265.97 Aligned_cols=277 Identities=12% Similarity=0.093 Sum_probs=205.6
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc---eEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEE
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDGS-QFLSVGIDNTIKT 242 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~---~~~~~~~h~~~V~~v~~sp~~~-~l~s~s~Dg~i~i 242 (639)
....+|.+.|++++|+|++ .+|++|+.||.|+|||+.++. ....+.+|...|.+++|+|+++ +|++|+.||.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 3456899999999999999 899999999999999998877 3455668999999999999999 9999999999999
Q ss_pred EeC-CCCCCCcccceEEEe--cCCeeEEeeecCCCCEEEEcCC--eeEEEeCCC---------CceeeeeecCCccEEEE
Q psy18073 243 WSS-ELSESDHIVPLHTII--SKSVISSISHQRKSKIFATCGD--QCQLWEHER---------NEPIRAFSWNVDSLHHV 308 (639)
Q Consensus 243 wd~-~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~---------~~~~~~~~~h~~~v~~v 308 (639)
||+ .++.. ..... +...|.+++|+| +..+++++. .|++||+++ ++++..+. |...|.++
T Consensus 84 wd~~~~~~~-----~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 156 (342)
T 1yfq_A 84 VDLIGSPSF-----QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTM 156 (342)
T ss_dssp ECSSSSSSE-----EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEE
T ss_pred EEeccCCce-----EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEE
Confidence 999 76532 11122 567899999999 888888874 999999998 77777777 88999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCC-ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccc-cceeee
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATK-LERVFA 386 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~ 386 (639)
+|+| ++ +++++.||.|++||+++ +........ .... ..+..+.... .+..++
T Consensus 157 ~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~---------------------~~i~~i~~~~~~~~~l~ 210 (342)
T 1yfq_A 157 DTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEE--SGLK---------------------YQIRDVALLPKEQEGYA 210 (342)
T ss_dssp EECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEE--CSCS---------------------SCEEEEEECSGGGCEEE
T ss_pred EecC-Cc--EEEEeCCCeEEEEECCccccccceeee--cCCC---------------------CceeEEEECCCCCCEEE
Confidence 9998 54 99999999999999987 443211000 0000 0111112221 111111
Q ss_pred eeeecCccceeeeccccccccc----cccccccccCccc---------ceeEEeeCCCCcceEEeccCCceEEEecCCcc
Q psy18073 387 KPFVGPREYVRALNATKLERVF----AKPFVANLDGHKD---------GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~---------~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
.. +....+.. ++.+.. .......+.+|.. .|.+++|+|++ .+|++|+.||.|++||+.++
T Consensus 211 ~~--~~dg~i~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 211 CS--SIDGRVAV----EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp EE--ETTSEEEE----EECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTT
T ss_pred EE--ecCCcEEE----EEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCccH
Confidence 11 11111111 111111 0133355566654 99999999999 99999999999999999999
Q ss_pred ccceeeeee-ccccccccccCCcccccccccccc
Q psy18073 454 SCVQTYQAH-DGHVRDTSTRPAVETTDLTRSFGW 486 (639)
Q Consensus 454 ~~~~~l~~h-~~~v~~v~~spdg~~~~~~~~~~~ 486 (639)
+++..+.+| .++|.+++ |+|..++.+...|+
T Consensus 284 ~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 284 KKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred hHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 999999998 99999999 99988877665554
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=6.6e-31 Score=272.61 Aligned_cols=252 Identities=19% Similarity=0.321 Sum_probs=206.1
Q ss_pred cccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC----------CceEEEEeccCCceEEEEEcCCCC-EEEEEe
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS----------QSCVQTYQAHDGHVRDVCFLPDGS-QFLSVG 235 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~----------~~~~~~~~~h~~~V~~v~~sp~~~-~l~s~s 235 (639)
..+.+|.+.|++++|+|+++.+||+|+.||.|+|||+.+ ...+..+.+|.+.|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445679999999999998438999999999999999976 677888999999999999999988 999999
Q ss_pred cCCeEEEEeCCCCCCCcc--cceEE-EecCCeeEEeeecC-CCCEEEEcCC--eeEEEeCCCC---ceeeeeecCCccEE
Q psy18073 236 IDNTIKTWSSELSESDHI--VPLHT-IISKSVISSISHQR-KSKIFATCGD--QCQLWEHERN---EPIRAFSWNVDSLH 306 (639)
Q Consensus 236 ~Dg~i~iwd~~~~~~~~~--~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~--~i~vwd~~~~---~~~~~~~~h~~~v~ 306 (639)
.||+|++||+.++..... .+... ..+...|.+++|+| ++.++++++. .|++||++++ +.+..+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987433211 11122 24567899999999 6788888764 9999999987 57788889999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeee
Q psy18073 307 HVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFA 386 (639)
Q Consensus 307 ~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 386 (639)
+++|+|++..++++|+.||+|++||+++....
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~------------------------------------------------ 313 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLK------------------------------------------------ 313 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSC------------------------------------------------
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC------------------------------------------------
Confidence 99999955568999999999999999863211
Q ss_pred eeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCc--------------
Q psy18073 387 KPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-------------- 452 (639)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~-------------- 452 (639)
+..+.+|...|.+++|+|++..+|++|+.||.|+|||+..
T Consensus 314 --------------------------~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 314 --------------------------LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp --------------------------SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred --------------------------eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 1556789999999999999955799999999999999987
Q ss_pred cccceeeeeeccccccccccCCcccccccccccccC-cccccc
Q psy18073 453 QSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 453 ~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
.+.+..+.+|...|.+++|+|++..+.++ .+.++ ...|..
T Consensus 368 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s--~s~dg~i~iw~~ 408 (430)
T 2xyi_A 368 PELLFIHGGHTAKISDFSWNPNEPWIICS--VSEDNIMQVWQM 408 (430)
T ss_dssp TTEEEECCCCSSCEEEEEECSSSTTEEEE--EETTSEEEEEEE
T ss_pred cceEEEcCCCCCCceEEEECCCCCCEEEE--EECCCCEEEeEc
Confidence 35667778999999999999999733332 23444 367753
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=1.9e-30 Score=270.79 Aligned_cols=281 Identities=19% Similarity=0.311 Sum_probs=219.0
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
+.+++|++.+++.+.++.+|.+.|.+++|+ + .+|++|+.||+|++||+.+++.+..+.+|...|.+++|+ ++.++
T Consensus 139 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~ 213 (445)
T 2ovr_B 139 NTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVV 213 (445)
T ss_dssp SCEEEEETTTCCEEEECCCCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEE
T ss_pred CcEEEEECCCCcEEEEEcCCCCCEEEEEec--C-CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEE
Confidence 468999999999999999999999999998 4 689999999999999999999999999999999999995 57899
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQF 310 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 310 (639)
+|+.||+|++||+.+++.. .....+...+.++++ ++..+++++. .|++||+++++++..+.+|...|.+++|
T Consensus 214 s~s~dg~i~~wd~~~~~~~----~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 214 SGSRDATLRVWDIETGQCL----HVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp EEETTSEEEEEESSSCCEE----EEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred EEeCCCEEEEEECCCCcEE----EEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 9999999999999986653 222245678999988 6677777763 9999999999999999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
++.++++|+.||.|++||+++++.+..+..... .+..+... +. ..++
T Consensus 288 ---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------------------~v~~~~~~--~~---~l~~ 334 (445)
T 2ovr_B 288 ---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-------------------------LTSGMELK--DN---ILVS 334 (445)
T ss_dssp ---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS-------------------------CEEEEEEE--TT---EEEE
T ss_pred ---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc-------------------------cEEEEEEe--CC---EEEE
Confidence 467899999999999999998876543321100 00111110 00 1111
Q ss_pred cCccceeeeccccccccccccccccccC---cccceeEEeeCCCCcceEEeccCCceEEEecCCccccceee-----eee
Q psy18073 391 GPREYVRALNATKLERVFAKPFVANLDG---HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY-----QAH 462 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l-----~~h 462 (639)
++.+... ..++......+..+.+ |...|++++|+ + .+|++|+.||.|++||+.+++.+..+ .+|
T Consensus 335 ~~~dg~i-----~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 406 (445)
T 2ovr_B 335 GNADSTV-----KIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--K-NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 406 (445)
T ss_dssp EETTSCE-----EEEETTTCCEEEEECSTTSCSSCEEEEEEC--S-SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGG
T ss_pred EeCCCeE-----EEEECCCCcEEEEEccCCCCCCCEEEEEEC--C-CEEEEEeCCCeEEEEECCCCceeeeeeccccCCC
Confidence 1111110 1111122334455554 88999999996 4 78999999999999999999999988 478
Q ss_pred ccccccccccCCccccccccccc
Q psy18073 463 DGHVRDTSTRPAVETTDLTRSFG 485 (639)
Q Consensus 463 ~~~v~~v~~spdg~~~~~~~~~~ 485 (639)
.+.|++++|+|+|..++.+...|
T Consensus 407 ~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 407 GGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp TCEEEEEEECSSEEEEEEECSSS
T ss_pred CceEEEEEecCCEEEEEEcccCC
Confidence 88999999999998877765544
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=5.7e-31 Score=270.37 Aligned_cols=246 Identities=12% Similarity=0.140 Sum_probs=205.8
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc------eEEEEeccCCceEEEEEcCC----C---CEE
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS------CVQTYQAHDGHVRDVCFLPD----G---SQF 231 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~------~~~~~~~h~~~V~~v~~sp~----~---~~l 231 (639)
....+.+|.+.|++++|+| .+|++|+.||.|++||+.+++ .+..+.+|...|.+++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4567889999999999998 589999999999999999988 78889999999999999999 9 999
Q ss_pred EEEecCCeEEEEeCCCCCCCcccceEEEecC------CeeEEeeec----CCCCE-EEEcCC--eeEEEeCCC------C
Q psy18073 232 LSVGIDNTIKTWSSELSESDHIVPLHTIISK------SVISSISHQ----RKSKI-FATCGD--QCQLWEHER------N 292 (639)
Q Consensus 232 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~------~~v~~~~~~----~~~~~-l~~~~~--~i~vwd~~~------~ 292 (639)
++++.||.|++||+.++.............. ..|.+++|+ |++.. +++++. .|++||+++ +
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998665222223333333 789999999 99998 888864 999999998 7
Q ss_pred ceee-----eeec-------CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCC
Q psy18073 293 EPIR-----AFSW-------NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNID 360 (639)
Q Consensus 293 ~~~~-----~~~~-------h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (639)
+.+. .+.+ |...|.+++|+| ++ +|++++.||.|++||+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~---------------------- 220 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPL---------------------- 220 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEE----------------------
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCcee----------------------
Confidence 7766 7744 889999999999 77 9999999999999999875443
Q ss_pred CCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccC---c---ccceeEEeeCCCCcc
Q psy18073 361 PSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG---H---KDGISCLAKHPTKLS 434 (639)
Q Consensus 361 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~v~~v~~sp~~~~ 434 (639)
..+.+ | ...|.+++|+|++ .
T Consensus 221 -----------------------------------------------------~~~~~~~~h~~~~~~i~~i~~~~~~-~ 246 (397)
T 1sq9_A 221 -----------------------------------------------------YNFESQHSMINNSNSIRSVKFSPQG-S 246 (397)
T ss_dssp -----------------------------------------------------EEEECCC---CCCCCEEEEEECSST-T
T ss_pred -----------------------------------------------------EEEeccccccccCCccceEEECCCC-C
Confidence 23344 8 8899999999999 9
Q ss_pred eEEeccCC---ceEEEecCCccccceeeee-------------eccccccccccCCcccccccccccccC-cccccc
Q psy18073 435 TIISGAYD---GEVKVWNLTSQSCVQTYQA-------------HDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 435 ~l~sgs~D---g~v~iWd~~~~~~~~~l~~-------------h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
+|++|+.| |.|++||+.+++.+..+.+ |...|.+++|+|++..++.+. .++ ...|..
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~ 320 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG---WDGKLRFWDV 320 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE---TTSEEEEEET
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe---CCCeEEEEEc
Confidence 99999999 9999999999999999998 999999999999998776543 333 367753
No 82
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.4e-31 Score=293.84 Aligned_cols=242 Identities=14% Similarity=0.213 Sum_probs=199.5
Q ss_pred ccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCC--CCceEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEE
Q psy18073 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT--SQSCVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIK 241 (639)
Q Consensus 166 ~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~--~~~~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~ 241 (639)
+..+.||.++|++++|+|+| .+|++|+.||.|+|||+. ++..+..+.+|.++|++++|+|+ +++|++|+.||+|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 35688999999999999999 899999999999999997 55778889999999999999987 99999999999999
Q ss_pred EEeCCCCCCCcccceEEEecCCeeEEeeecCC--CCEEEEcCC--eeEEEeCCCCc--eeeeeecCCccEEEEEEcCC--
Q psy18073 242 TWSSELSESDHIVPLHTIISKSVISSISHQRK--SKIFATCGD--QCQLWEHERNE--PIRAFSWNVDSLHHVQFNPI-- 313 (639)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~--~i~vwd~~~~~--~~~~~~~h~~~v~~v~~sp~-- 313 (639)
+||+.++... .......+...|.+++|+|+ +..+++++. .|++||++++. ....+.+|...|.+++|+|.
T Consensus 81 vwd~~~~~~~--~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 81 IWKEENGRWS--QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEETTEEE--EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEECCCCccc--ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999875411 11222335679999999999 899998884 99999998873 45567889999999999994
Q ss_pred ----------CCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccce
Q psy18073 314 ----------DKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 383 (639)
Q Consensus 314 ----------~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 383 (639)
++.++++|+.||+|++||++++....
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~-------------------------------------------- 194 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTY-------------------------------------------- 194 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEE--------------------------------------------
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccc--------------------------------------------
Confidence 47899999999999999997653210
Q ss_pred eeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCC---CcceEEeccCCceEEEecCCccc-----c
Q psy18073 384 VFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPT---KLSTIISGAYDGEVKVWNLTSQS-----C 455 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~---~~~~l~sgs~Dg~v~iWd~~~~~-----~ 455 (639)
.....+.+|.+.|++++|+|+ + .+|++|+.||.|++||+.+++ .
T Consensus 195 ---------------------------~~~~~~~~h~~~V~~l~~sp~~~~~-~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 246 (753)
T 3jro_A 195 ---------------------------VLESTLEGHSDWVRDVAWSPTVLLR-SYLASVSQDRTCIIWTQDNEQGPWKKT 246 (753)
T ss_dssp ---------------------------EEEEEECCCSSCEEEEEECCCCSSS-EEEEEEESSSCEEEEEESSSSSCCBCC
T ss_pred ---------------------------eeeeeecCCCCcEEEEEeccCCCCC-CEEEEEecCCEEEEecCCCCCCcceeE
Confidence 012556789999999999999 7 999999999999999999875 3
Q ss_pred ceeeeeeccccccccccCCcccccccc
Q psy18073 456 VQTYQAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 456 ~~~l~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
+....+|.+.|++++|+|+|..++.+.
T Consensus 247 ~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 247 LLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp BSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred EeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 444557889999999999998776553
No 83
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=272.72 Aligned_cols=260 Identities=19% Similarity=0.304 Sum_probs=198.3
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc-----------eEEEEeccC------------CceEEEEEcCC
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-----------CVQTYQAHD------------GHVRDVCFLPD 227 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~-----------~~~~~~~h~------------~~V~~v~~sp~ 227 (639)
.|.+.|++++|+|+| .+||+|+.||.|+|||+.+++ ....+.+|. +.|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 378999999999999 999999999999999998877 578889998 88999999999
Q ss_pred C--CEEEEEecCCeEEEEeCCCCCCC-------------------cccc---------------eEE--EecCCeeEEee
Q psy18073 228 G--SQFLSVGIDNTIKTWSSELSESD-------------------HIVP---------------LHT--IISKSVISSIS 269 (639)
Q Consensus 228 ~--~~l~s~s~Dg~i~iwd~~~~~~~-------------------~~~~---------------~~~--~~~~~~v~~~~ 269 (639)
+ ..|++++.||+|++||+.++... .... ... ..+...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 89999999999999998753210 0000 001 23566899999
Q ss_pred ecCCCCEEEEcCC-eeEEEeCCC-Cceee-------eeecCCccEEEEEEcCCCC-cEEEEEeCCCcEEEEECCCccccC
Q psy18073 270 HQRKSKIFATCGD-QCQLWEHER-NEPIR-------AFSWNVDSLHHVQFNPIDK-HILASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 270 ~~~~~~~l~~~~~-~i~vwd~~~-~~~~~-------~~~~h~~~v~~v~~sp~~~-~~l~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
|+|++.+++++.+ .|++||+++ ++.+. .+.+|...|.+++|+| ++ ++|++|+.||+|++||++++....
T Consensus 185 ~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9999999999865 999999984 44444 3568999999999999 55 999999999999999999876421
Q ss_pred CccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc
Q psy18073 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH 419 (639)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 419 (639)
.......... . ......+.+|
T Consensus 264 ~~~~~~~~~~--------------------------------------------~---------------~~~~~~~~~~ 284 (447)
T 3dw8_B 264 RHSKLFEEPE--------------------------------------------D---------------PSNRSFFSEI 284 (447)
T ss_dssp TTCEEECCC----------------------------------------------------------------CCHHHHH
T ss_pred ceeeEeccCC--------------------------------------------C---------------cccccccccc
Confidence 1000000000 0 0001234557
Q ss_pred ccceeEEeeCCCCcceEEeccCCceEEEecCCc-cccceeeeeeccccc---------------cccccCCccccccccc
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAHDGHVR---------------DTSTRPAVETTDLTRS 483 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~-~~~~~~l~~h~~~v~---------------~v~~spdg~~~~~~~~ 483 (639)
...|.+++|+|+| .+|++|+. |.|++||+++ ++++.++.+|...+. .++|+|+|..++.+
T Consensus 285 ~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~-- 360 (447)
T 3dw8_B 285 ISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG-- 360 (447)
T ss_dssp TTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE--
T ss_pred CceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEe--
Confidence 7799999999999 99999998 9999999997 999999999965333 38999999877443
Q ss_pred ccccCc-cccccCC
Q psy18073 484 FGWESS-DAWQQHD 496 (639)
Q Consensus 484 ~~~~~~-~~~~~~d 496 (639)
+.++. +.|....
T Consensus 361 -s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 361 -SYNNFFRMFDRNT 373 (447)
T ss_dssp -CSTTEEEEEETTT
T ss_pred -ccCCEEEEEEcCC
Confidence 34443 7775443
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-30 Score=265.22 Aligned_cols=257 Identities=16% Similarity=0.206 Sum_probs=209.8
Q ss_pred hhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhh--ccccccccccccccEEEEEECCC--CCeeEEEeeCC
Q psy18073 120 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPT--KLSTIISGAYD 195 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~l~~H~~~V~~l~~sp~--~~~~l~sgs~d 195 (639)
.+..+...|..+.++++.......+.+ ..+++|++. +.+.+..+.+|.+.|++++|+|+ + .+|++|+.|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~d 78 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 78 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECC------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccC
Confidence 345667777777777776655544333 358899987 67788899999999999999987 7 899999999
Q ss_pred CcEEEEeCCCCc--eEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeec
Q psy18073 196 GEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQ 271 (639)
Q Consensus 196 g~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 271 (639)
|.|++||+.+++ .+..+.+|...|.+++|+|+ +.+|++++.||.|++||+.+...... .....+...|.+++|+
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP--IIIDAHAIGVNSASWA 156 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE--EEEECCTTCEEEEEEC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee--EEecCCCCceEEEEEc
Confidence 999999999987 77888899999999999999 99999999999999999997644322 2333456789999999
Q ss_pred C-------------CCCEEEEcCC--eeEEEeCCCCc----eeeeeecCCccEEEEEEcCCC---CcEEEEEeCCCcEEE
Q psy18073 272 R-------------KSKIFATCGD--QCQLWEHERNE----PIRAFSWNVDSLHHVQFNPID---KHILASCASDRSIIL 329 (639)
Q Consensus 272 ~-------------~~~~l~~~~~--~i~vwd~~~~~----~~~~~~~h~~~v~~v~~sp~~---~~~l~s~s~Dg~i~i 329 (639)
| ++.++++++. .|++||++++. .+..+.+|...|.+++|+| + +.+|++++.||.|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEE
Confidence 9 6888888874 99999998765 4567788999999999999 6 899999999999999
Q ss_pred EECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc
Q psy18073 330 YDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA 409 (639)
Q Consensus 330 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (639)
||++++......
T Consensus 236 wd~~~~~~~~~~-------------------------------------------------------------------- 247 (379)
T 3jrp_A 236 WTQDNEQGPWKK-------------------------------------------------------------------- 247 (379)
T ss_dssp EEESSTTSCCEE--------------------------------------------------------------------
T ss_pred EeCCCCCcccee--------------------------------------------------------------------
Confidence 999875321000
Q ss_pred ccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccce
Q psy18073 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ 457 (639)
Q Consensus 410 ~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~ 457 (639)
.+....+|...|++++|+|++ .+|++++.||.|++||+..+....
T Consensus 248 --~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~~~~~ 292 (379)
T 3jrp_A 248 --TLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLEGKWE 292 (379)
T ss_dssp --EESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEETTEEE
T ss_pred --eeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCCCCccc
Confidence 012234588899999999999 999999999999999998654433
No 85
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.9e-30 Score=261.14 Aligned_cols=201 Identities=10% Similarity=0.094 Sum_probs=165.1
Q ss_pred cccccEEEEEECCCCCeeEE--EeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q psy18073 171 GHKDGISCLAKHPTKLSTII--SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~--sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~ 248 (639)
++...+.+++||||| +++| +|+.|++|+|||+.+++++..+. |.+.|.+|+|+|||++|++++.|+ +++|+..++
T Consensus 131 ~~~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~ 207 (365)
T 4h5i_A 131 NADDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTG 207 (365)
T ss_dssp CTTCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTC
T ss_pred CcccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccC
Confidence 455679999999999 7765 45579999999999999998886 788899999999999999998655 666666654
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcCC------eeEEEeCCCCce----eeeeecCCccEEEEEEcCCCCcEE
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCGD------QCQLWEHERNEP----IRAFSWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~i~vwd~~~~~~----~~~~~~h~~~v~~v~~sp~~~~~l 318 (639)
..... .....+...+.+++|+|++..+++++. .+++||+..+.. ...+.+|...|++++|+| ++++|
T Consensus 208 ~~~~~--~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~l 284 (365)
T 4h5i_A 208 SCIAR--KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELA 284 (365)
T ss_dssp CEEEE--ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEE
T ss_pred cceee--eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCce
Confidence 43211 111224558999999999999998762 578898877653 456788999999999999 89999
Q ss_pred EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceee
Q psy18073 319 ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRA 398 (639)
Q Consensus 319 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (639)
|+|+.|++|+|||+++++++.
T Consensus 285 asgs~D~~V~iwd~~~~~~~~----------------------------------------------------------- 305 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSK----------------------------------------------------------- 305 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEE-----------------------------------------------------------
T ss_pred EEEcCCCEEEEEECCCCcEEE-----------------------------------------------------------
Confidence 999999999999998876541
Q ss_pred eccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCc
Q psy18073 399 LNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452 (639)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~ 452 (639)
..+.+|.++|++|+|+||| ++|||||.|++|||||+..
T Consensus 306 ---------------~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 306 ---------------IFKQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ---------------EETTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCT
T ss_pred ---------------EecCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCC
Confidence 2257899999999999999 9999999999999999864
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.7e-30 Score=304.44 Aligned_cols=346 Identities=15% Similarity=0.203 Sum_probs=240.7
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEe
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 202 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd 202 (639)
.+...|..+.++++.......+.+ +.+++|+..+++.+.++.+|.+.|.+++|+|+| .+||+|+.||+|+|||
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d------~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGAD------KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD-SYIATCSADKKVKIWD 685 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred cccccEEEEEECCCCCEEEEEeCC------CeEEEEECCCCCEEEEeccCCCCEEEEEEecCC-CEEEEEeCCCeEEEEE
Confidence 344555555555554443333222 458999999999999999999999999999999 9999999999999999
Q ss_pred CCCCceEEEEeccCCceEEEEEcC--CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEc
Q psy18073 203 LTSQSCVQTYQAHDGHVRDVCFLP--DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATC 280 (639)
Q Consensus 203 ~~~~~~~~~~~~h~~~V~~v~~sp--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 280 (639)
+.+++.+..+.+|.+.|.+++|+| ++.++++|+.||+|++||+.++... .....+...|.+++|+|++..++++
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~----~~~~~h~~~v~~~~~sp~~~~l~s~ 761 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR----NTMFGHTNSVNHCRFSPDDELLASC 761 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE----EEECCCSSCEEEEEECSSTTEEEEE
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh----heecCCCCCEEEEEEecCCCEEEEE
Confidence 999999999999999999999999 5568999999999999999987653 2222456789999999999999988
Q ss_pred CC--eeEEEeCCCCceeeeee-------------------------------------------------------cCCc
Q psy18073 281 GD--QCQLWEHERNEPIRAFS-------------------------------------------------------WNVD 303 (639)
Q Consensus 281 ~~--~i~vwd~~~~~~~~~~~-------------------------------------------------------~h~~ 303 (639)
+. .|++||+.+++....+. +|..
T Consensus 762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 841 (1249)
T 3sfz_A 762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS 841 (1249)
T ss_dssp ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence 74 89999988765433321 6778
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCC------chhhhhhcc
Q psy18073 304 SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEG------PREYVRALN 377 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~ 377 (639)
.|.+++|+| ++.++++++.||.|++||+.++.....+... ...+ ..+.++|++. ..+.+..+.
T Consensus 842 ~v~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h----~~~v------~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 842 TIQYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGH----LSWV------HGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp CCCEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCC----SSCE------EEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCC----ccce------EEEEECCCCCEEEEEeCCCeEEEEE
Confidence 899999999 8889999999999999999887665433211 1111 1123333332 011111111
Q ss_pred cccc--------ceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEec
Q psy18073 378 ATKL--------ERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449 (639)
Q Consensus 378 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd 449 (639)
.... .......+..................+..........+...+.+++|+|++ .++++|+.||.|++||
T Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 911 TKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL-EYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp HHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS-SEEEEEETTSCCEEEE
T ss_pred ccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC-CEEEEEcCCCCEEEEE
Confidence 0000 000000011111111111011111111111111112245679999999999 9999999999999999
Q ss_pred CCccccceeeeeeccccccccccCCcccccccccccccC-cccccc
Q psy18073 450 LTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 450 ~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
+.+++.+..+.+|.+.|.+++|+|+|+.++.+. .++ ...|..
T Consensus 990 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~---~dg~i~vwd~ 1032 (1249)
T 3sfz_A 990 LPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS---EDSVIQVWNW 1032 (1249)
T ss_dssp TTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC---SSSBEEEEET
T ss_pred cCCCceeeecccCCCceEEEEECCCCCEEEEEc---CCCEEEEEEC
Confidence 999999999999999999999999998776543 333 266653
No 87
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=6.7e-30 Score=261.10 Aligned_cols=293 Identities=13% Similarity=0.135 Sum_probs=207.2
Q ss_pred hcccCccccccCCCCC-CCCCCCCchhHHHhhhhhhhhhhhccccccccc--cccccEEEEEECC-CCCeeEEEeeCCCc
Q psy18073 122 RETKTSIHRIPRNIDP-SLHPFEGPREYVRALNATKLERVFAKPFVANLD--GHKDGISCLAKHP-TKLSTIISGAYDGE 197 (639)
Q Consensus 122 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~--~H~~~V~~l~~sp-~~~~~l~sgs~dg~ 197 (639)
..+...|..+.+.++. ......+.+ ..+++|++.++.....+. +|.+.|.+++|+| ++ .+|++|+.||.
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~d~~ 142 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKG------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT-NQLFVSSIRGA 142 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBT------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE-EEEEEEETTTE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCC------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC-CEEEEEeCCCE
Confidence 3445666677666665 333333322 358899998877776665 7999999999999 56 89999999999
Q ss_pred EEEEeCCCCceEEEEecc---CCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCC
Q psy18073 198 VKVWNLTSQSCVQTYQAH---DGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRK 273 (639)
Q Consensus 198 i~vWd~~~~~~~~~~~~h---~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~ 273 (639)
|++||+.+ ..+..+..| ...|.+++|+|++++|++|+.||.|++||++ ++. ...+ .+...|.+++|+|+
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~-----~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE-----IFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCE-----EEEEECSSSCEEEEEECSS
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCE-----EEEeccCCCcEEEEEECCC
Confidence 99999985 556666544 4889999999999999999999999999994 332 2333 35679999999999
Q ss_pred CC-EEEEcCC--eeEEEeCCC----CceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccc
Q psy18073 274 SK-IFATCGD--QCQLWEHER----NEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346 (639)
Q Consensus 274 ~~-~l~~~~~--~i~vwd~~~----~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 346 (639)
+. ++++++. .|++||+++ +..+..+ +|...|.+++|+|.++.+|++++.||.|++||+++++....+.....
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCB
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccc
Confidence 98 8888774 999999998 5566666 79999999999996678999999999999999999877654432211
Q ss_pred ccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccc---cccccccccccccC--ccc
Q psy18073 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKL---ERVFAKPFVANLDG--HKD 421 (639)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--h~~ 421 (639)
... .........|+|.+. .....+..++.. ..+.... ++...+..+..+.+ |..
T Consensus 295 ~~~----~~~~~~~~~~~p~~~---------------~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~ 353 (383)
T 3ei3_B 295 RQF----QHLTPIKATWHPMYD---------------LIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAG 353 (383)
T ss_dssp CCC----TTSCCCCCEECSSSS---------------EEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCS
T ss_pred ccc----ccccceEEeccCCCC---------------ceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCc
Confidence 110 000111123333222 222222222211 1111122 22223445566766 567
Q ss_pred ceeEEeeCCCCcceEEeccCCceEEEecCCc
Q psy18073 422 GISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452 (639)
Q Consensus 422 ~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~ 452 (639)
.+.+++|+|++ .+|++|+ ||.|++||+++
T Consensus 354 ~~~~~~~s~~g-~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 354 IISLNKFSPTG-DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCEEEECTTS-SEEEEEE-TTEEEEEECC-
T ss_pred eEEEEEEecCc-cEEEEec-CCcEEEEecCC
Confidence 78888999999 9999997 99999999864
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-30 Score=265.80 Aligned_cols=290 Identities=11% Similarity=0.136 Sum_probs=209.4
Q ss_pred hhhhhhccccccccccccccEEEEEECCCCCe-eEEEeeCCCcEEEEeC----CCCc------eEEEEec----------
Q psy18073 156 KLERVFAKPFVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNL----TSQS------CVQTYQA---------- 214 (639)
Q Consensus 156 ~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~-~l~sgs~dg~i~vWd~----~~~~------~~~~~~~---------- 214 (639)
.+|++...........|.+.|++++|+|+| . +||+|+.||.|++||+ .+++ ....+..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (425)
T 1r5m_A 28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLD-ESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGK 106 (425)
T ss_dssp ------CCCEECEEEEECSCCSEEEECSSC-TTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-----
T ss_pred ccccchhhhhheeeeeccCceEEEEECCCC-CcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccC
Confidence 345554333333333466999999999999 7 9999999999999999 8888 4555554
Q ss_pred cCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCC
Q psy18073 215 HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFATCGD--QCQLWEHER 291 (639)
Q Consensus 215 h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~ 291 (639)
|.+.|++++|+|++++|++++.||.|++||. ++.. ...+ .+...|.+++|+|++.++++++. .|++||+.+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGAL-----LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE-----EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCe-----eeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 7889999999999999999999999999993 3332 2222 35678999999999999988874 999999999
Q ss_pred CceeeeeecCCcc---------------EEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccccccccccccc
Q psy18073 292 NEPIRAFSWNVDS---------------LHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIP 356 (639)
Q Consensus 292 ~~~~~~~~~h~~~---------------v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (639)
++.+..+..+... +.+++|+| + ..+++++.||.|++||+++++....+... .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~----~------- 247 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGH----H------- 247 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCC----S-------
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccC----C-------
Confidence 9999999888777 99999998 5 46889999999999999987654332210 0
Q ss_pred CCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccc---ccccccccccCcccceeEEeeCCCCc
Q psy18073 357 RNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERV---FAKPFVANLDGHKDGISCLAKHPTKL 433 (639)
Q Consensus 357 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~ 433 (639)
..+..+.+...+..+........+.. .....+..+.+|...|.+++|+|++
T Consensus 248 -------------------------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 301 (425)
T 1r5m_A 248 -------------------------GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD- 301 (425)
T ss_dssp -------------------------SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-
T ss_pred -------------------------CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-
Confidence 01111222222222222222222222 2344457778899999999999988
Q ss_pred ceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccccccccccCcccccc
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQ 494 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~~~~~~~ 494 (639)
++++++.||.|++||+.+++.+..+..|...|.+++|+|+|..++.+...| ....|..
T Consensus 302 -~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~i~~~ 359 (425)
T 1r5m_A 302 -KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDG--QVNVYDL 359 (425)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTS--CEEEEEC
T ss_pred -EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCC--eEEEEEC
Confidence 899999999999999999999999999999999999999998876654322 2367754
No 89
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.7e-29 Score=250.85 Aligned_cols=256 Identities=16% Similarity=0.269 Sum_probs=211.4
Q ss_pred hhhhhhhhhccccccccc--cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCE
Q psy18073 153 NATKLERVFAKPFVANLD--GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~--~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
+.+++||+.++++++.+. +|...|++++|+|++ ++||+|+.||+|++||+.+++++..+.+|...+.++.+ ++..
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~ 121 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI 121 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCE
Confidence 569999999999887664 678889999999999 99999999999999999999999999999998887665 5679
Q ss_pred EEEEecCCeEEEEeCCCCCCCcccceEE-EecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCce----eeeeecCCc
Q psy18073 231 FLSVGIDNTIKTWSSELSESDHIVPLHT-IISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEP----IRAFSWNVD 303 (639)
Q Consensus 231 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~----~~~~~~h~~ 303 (639)
+++++.++.+++|+....... ... ..+...+..+.+++++.++++++. .|++||+++++. ......|.+
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 197 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHH----VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG 197 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCE----EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS
T ss_pred EEEEecCCceEeeecCCCcee----EEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC
Confidence 999999999999998875442 222 345678999999999999999884 999999988763 445567888
Q ss_pred cEEEEEEcCCCCcEE--EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccc
Q psy18073 304 SLHHVQFNPIDKHIL--ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKL 381 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l--~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 381 (639)
.|.+++++|.++.++ ++++.+++|++||.+.....
T Consensus 198 ~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~------------------------------------------- 234 (318)
T 4ggc_A 198 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL------------------------------------------- 234 (318)
T ss_dssp CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEE-------------------------------------------
T ss_pred ceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccc-------------------------------------------
Confidence 999999999666655 46678999999998764332
Q ss_pred ceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe--ccCCceEEEecCCccccceee
Q psy18073 382 ERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS--GAYDGEVKVWNLTSQSCVQTY 459 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s--gs~Dg~v~iWd~~~~~~~~~l 459 (639)
....|...+..+.|+|++ ..+++ |+.||.|++||+.+++++.++
T Consensus 235 ---------------------------------~~~~~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 235 ---------------------------------SAVDAHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp ---------------------------------EEEECSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred ---------------------------------ccccceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 122366678999999998 55544 558999999999999999999
Q ss_pred eeeccccccccccCCcccccccccccccCc-cccccC
Q psy18073 460 QAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQH 495 (639)
Q Consensus 460 ~~h~~~v~~v~~spdg~~~~~~~~~~~~~~-~~~~~~ 495 (639)
.+|.+.|++++|+|||+.++. .+.|+. +.|+-.
T Consensus 281 ~gH~~~V~~l~~spdg~~l~S---~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 281 KGHTSRVLSLTMSPDGATVAS---AAADETLRLWRCF 314 (318)
T ss_dssp CCCSSCEEEEEECTTSSCEEE---EETTTEEEEECCS
T ss_pred cCCCCCEEEEEEcCCCCEEEE---EecCCeEEEEECC
Confidence 999999999999999987653 456654 888643
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=262.68 Aligned_cols=308 Identities=12% Similarity=0.114 Sum_probs=206.5
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhcccccccc-ccccccEEEEEECCC---CCeeEEEeeCCCcE
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPT---KLSTIISGAYDGEV 198 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l-~~H~~~V~~l~~sp~---~~~~l~sgs~dg~i 198 (639)
.+...|..+.+.++.......+... ..-+.+++|++.+++..... .+|.+.|.+++|+|+ + .+|++|+.||.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~--~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~l~~~~~dg~i 92 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFA--RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ-RYLATGDFGGNL 92 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC----CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTT-CCEEEEETTSCE
T ss_pred CCCCceEEEEEcCCCceEEEecCcc--CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCC-ceEEEecCCCeE
Confidence 4566777777776654332222110 01245889999887765443 379999999999999 6 899999999999
Q ss_pred EEEeCCCCc-eEEEEeccCCceEEEEE------cCCCCEEEEEecCCeEEEEeCCCCCC-CcccceEEEecCCeeEEee-
Q psy18073 199 KVWNLTSQS-CVQTYQAHDGHVRDVCF------LPDGSQFLSVGIDNTIKTWSSELSES-DHIVPLHTIISKSVISSIS- 269 (639)
Q Consensus 199 ~vWd~~~~~-~~~~~~~h~~~V~~v~~------sp~~~~l~s~s~Dg~i~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~- 269 (639)
++||+.+++ .+..+.+|.+.|.+++| +|++++|++++.||.|++||+.++.. ......+.......+.+++
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEE
Confidence 999999988 88999999999999955 68999999999999999999998662 2111111111123677777
Q ss_pred ---ecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCC--CCcEEEEEeCCCcEEEEECCCccccCCcc
Q psy18073 270 ---HQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPI--DKHILASCASDRSIILYDTRATVLSRNPD 342 (639)
Q Consensus 270 ---~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 342 (639)
++|++.++++++. .|++||+++++... ...|...|.+++|+|. ++.+|++|+.||.|++||+++++....+.
T Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 173 GNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp ECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEE
T ss_pred EeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccccee
Confidence 7899999999874 99999999988744 4678899999999994 57889999999999999999876654332
Q ss_pred ccccccccccccccCCCCCCCCCCCCchhhhhhccccccce-eeeeeeecCccceeeecccccccc-----------ccc
Q psy18073 343 EYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER-VFAKPFVGPREYVRALNATKLERV-----------FAK 410 (639)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 410 (639)
.... ..+...+..+.....+. .++.....+.-.+........... ...
T Consensus 252 ~~~~--------------------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~ 311 (357)
T 3i2n_A 252 SVSE--------------------KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSV 311 (357)
T ss_dssp EEEE--------------------ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEE
T ss_pred eecc--------------------CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccc
Confidence 1000 00011112222222222 111110000001111100000000 001
Q ss_pred cccccccCcccceeEEeeCCCCcceEE-eccCCceEEEecCCcccc
Q psy18073 411 PFVANLDGHKDGISCLAKHPTKLSTII-SGAYDGEVKVWNLTSQSC 455 (639)
Q Consensus 411 ~~~~~~~~h~~~v~~v~~sp~~~~~l~-sgs~Dg~v~iWd~~~~~~ 455 (639)
..+..+.+|...|++++|+|++ .+|+ ||+.||.|++||+.+.+.
T Consensus 312 ~~~~~~~~~~~~v~~~~~s~~~-~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 312 SLLQNVTLSTQPISSLDWSPDK-RGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEECCSSCEEEEEECSSS-TTEEEEEETTSEEEEEEECC---
T ss_pred ceeeccccCCCCeeEEEEcCCC-CeEEEEecCCCcEEEEECCCccc
Confidence 3457788999999999999999 7777 899999999999987654
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=7.4e-30 Score=258.75 Aligned_cols=270 Identities=11% Similarity=0.157 Sum_probs=207.9
Q ss_pred ccccccccEEEEEECCC---CCeeEEEeeCCCcEEEEeCCCCceEEEEec-----cCCceEEEEEcCC----CCEEEEEe
Q psy18073 168 NLDGHKDGISCLAKHPT---KLSTIISGAYDGEVKVWNLTSQSCVQTYQA-----HDGHVRDVCFLPD----GSQFLSVG 235 (639)
Q Consensus 168 ~l~~H~~~V~~l~~sp~---~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-----h~~~V~~v~~sp~----~~~l~s~s 235 (639)
...+|.++|++++|+|+ +...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +++|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 435677777778999999998888777754 5578999999998 67999999
Q ss_pred cCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecC-CCCEEEEcCC--eeEEEeCCCCceeeee---ecCCccEEEE
Q psy18073 236 IDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQR-KSKIFATCGD--QCQLWEHERNEPIRAF---SWNVDSLHHV 308 (639)
Q Consensus 236 ~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~--~i~vwd~~~~~~~~~~---~~h~~~v~~v 308 (639)
.||.|++||+.+++.. ..+ .+...|.+++|+| ++.++++++. .|++||+++++.+..+ .+|...|.++
T Consensus 93 ~dg~i~v~d~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 SRGIIRIINPITMQCI-----KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp TTCEEEEECTTTCCEE-----EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred CCCEEEEEEchhceEe-----eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 9999999999986543 333 3667999999999 8999999884 9999999999998888 7899999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeee
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP 388 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 388 (639)
+|+| ++.+|++++.||.|++||+++++....+... ..+.|.+. .....
T Consensus 168 ~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------------~~~~~~~~---------------~~~~~ 215 (366)
T 3k26_A 168 DYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKES----------------YDYNPNKT---------------NRPFI 215 (366)
T ss_dssp EECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHH----------------HTCCGGGC---------------SSCCC
T ss_pred EECC-CCCEEEEecCCCCEEEEECCCCcccccccee----------------EEecCCCC---------------ccccc
Confidence 9999 8899999999999999999987655332210 01111110 00000
Q ss_pred eecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccc-------------
Q psy18073 389 FVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC------------- 455 (639)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~------------- 455 (639)
......+......+|...|.+++|+ + .++++|+.||.|++||+.+++.
T Consensus 216 ----------------~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 276 (366)
T 3k26_A 216 ----------------SQKIHFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVT 276 (366)
T ss_dssp ----------------CEEECCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEE
T ss_pred ----------------ceeeccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchh
Confidence 0000011124556799999999999 5 7999999999999999988754
Q ss_pred -ceeeeeeccccccccccCC--cccccccccccccCccccccC
Q psy18073 456 -VQTYQAHDGHVRDTSTRPA--VETTDLTRSFGWESSDAWQQH 495 (639)
Q Consensus 456 -~~~l~~h~~~v~~v~~spd--g~~~~~~~~~~~~~~~~~~~~ 495 (639)
+..+.+|...|++++|+|+ |..++.+...| ....|...
T Consensus 277 ~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg--~i~vwd~~ 317 (366)
T 3k26_A 277 ILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG--KLYVWDLE 317 (366)
T ss_dssp EEEEEECSSCCSSCCCCEECTTSSEEEEECTTS--CEEEEECC
T ss_pred eeccccccCCcEEEEEEcCCCCCcEEEEEecCC--cEEEEECC
Confidence 7788899999999999999 87776553222 23677643
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=8.2e-30 Score=265.01 Aligned_cols=250 Identities=21% Similarity=0.390 Sum_probs=210.1
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
+.+++||..+++.+..+.+|.+.|.+++| ++ .+|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+ +..++
T Consensus 153 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~ 227 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMV 227 (435)
T ss_dssp SCEEEEESSSCCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEE
T ss_pred CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEE
Confidence 45899999999999999999999999999 56 799999999999999999999999999999999999997 45999
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEE
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQF 310 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 310 (639)
+|+.||+|++||+.++..... ......+...|.++++ ++.++++++. .|++||+++++.+..+.+|...|.+++|
T Consensus 228 s~s~dg~i~vwd~~~~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 304 (435)
T 1p22_A 228 TCSKDRSIAVWDMASPTDITL-RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 304 (435)
T ss_dssp EEETTSCEEEEECSSSSCCEE-EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EeeCCCcEEEEeCCCCCCcee-eeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe
Confidence 999999999999997654311 1122235568889988 6777887764 9999999999999999999999999999
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
+ ++++++|+.||+|++||+++++++
T Consensus 305 ~---~~~l~~g~~dg~i~iwd~~~~~~~---------------------------------------------------- 329 (435)
T 1p22_A 305 R---DRLVVSGSSDNTIRLWDIECGACL---------------------------------------------------- 329 (435)
T ss_dssp E---TTEEEEEETTSCEEEEETTTCCEE----------------------------------------------------
T ss_pred C---CCEEEEEeCCCeEEEEECCCCCEE----------------------------------------------------
Confidence 5 469999999999999999876543
Q ss_pred cCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc---------cceeeee
Q psy18073 391 GPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---------CVQTYQA 461 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~---------~~~~l~~ 461 (639)
..+.+|...|.+++| ++ .+|++|+.||.|++||+.+++ ++..+.+
T Consensus 330 -----------------------~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 383 (435)
T 1p22_A 330 -----------------------RVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 383 (435)
T ss_dssp -----------------------EEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC
T ss_pred -----------------------EEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccccccchheeeccC
Confidence 456789999999999 56 899999999999999998877 7888999
Q ss_pred eccccccccccCCcccccccccccccC-ccccccCC
Q psy18073 462 HDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQHD 496 (639)
Q Consensus 462 h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~~d 496 (639)
|.+.|.+++| ++..++. .+.|+ .+.|.-.+
T Consensus 384 h~~~v~~l~~--~~~~l~s---~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 384 HSGRVFRLQF--DEFQIVS---SSHDDTILIWDFLN 414 (435)
T ss_dssp CSSCCCCEEE--CSSCEEE---CCSSSEEEEEC---
T ss_pred CCCCeEEEEe--CCCEEEE---EeCCCEEEEEECCC
Confidence 9999999999 5544433 34444 37886443
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1e-30 Score=267.51 Aligned_cols=255 Identities=11% Similarity=0.012 Sum_probs=176.3
Q ss_pred ccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEE-----EEeccCCceEEEEEcC--------CCCEEEEEec
Q psy18073 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ-----TYQAHDGHVRDVCFLP--------DGSQFLSVGI 236 (639)
Q Consensus 170 ~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~-----~~~~h~~~V~~v~~sp--------~~~~l~s~s~ 236 (639)
.+|...+....+++++ .+||+|+.|++|+|||+.++.... .+.+|.+.|++|+|+| |+++|||||.
T Consensus 86 ~~~~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp C----------CCEEE-EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred cccCCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 3455555566666666 899999999999999998886543 3578999999999998 8899999999
Q ss_pred CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCC-EEEEcCC--eeEEEeCCCCceeee----------------
Q psy18073 237 DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSK-IFATCGD--QCQLWEHERNEPIRA---------------- 297 (639)
Q Consensus 237 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~--~i~vwd~~~~~~~~~---------------- 297 (639)
|++|+|||+.++... .....+...+.+++|+|++. ++++++. .|++||+++++....
T Consensus 165 D~tv~~Wd~~~~~~~----~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 165 DCTLIIWRLTDEGPI----LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp TSEEEEEEEETTEEE----EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred CCeEEEEECCCCcee----eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 999999999876543 45556778999999999874 6777764 999999988764332
Q ss_pred ---------eecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCC
Q psy18073 298 ---------FSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEG 368 (639)
Q Consensus 298 ---------~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (639)
..+|...|.++.|++.++..|++++.|+++++||+..+.....+........ ...+.|.
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~----------~~~~~~~-- 308 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLG----------PKNLLPN-- 308 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------------CCSCS--
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccc----------cEEEccc--
Confidence 2367788999999844899999999999999999988765433221100000 0000000
Q ss_pred chhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEe
Q psy18073 369 PREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448 (639)
Q Consensus 369 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iW 448 (639)
......+...+..+.+.+.+..++++|+.||+|++|
T Consensus 309 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lw 344 (393)
T 4gq1_A 309 --------------------------------------------VQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLI 344 (393)
T ss_dssp --------------------------------------------EEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEE
T ss_pred --------------------------------------------cccccccCcceeEEEccCCCCEEEEEECCCCEEEEE
Confidence 012223333344444444342678899999999999
Q ss_pred cCCccccceeeeeeccccccccccCCccccccccccc
Q psy18073 449 NLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFG 485 (639)
Q Consensus 449 d~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~ 485 (639)
|+.+++++..+.+|..+|++|+|||||+.+|.+...|
T Consensus 345 d~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 345 NTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp ETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred ECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 9999999999999999999999999999998775443
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.5e-30 Score=283.55 Aligned_cols=328 Identities=13% Similarity=0.168 Sum_probs=228.8
Q ss_pred hhhhhhhhhccccccccccccc---cEEEEEECCC-CCeeEEEeeCCCcEEEEeCCCCceEEEE-e---ccCCceEEEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKD---GISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQTY-Q---AHDGHVRDVCF 224 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~---~V~~l~~sp~-~~~~l~sgs~dg~i~vWd~~~~~~~~~~-~---~h~~~V~~v~~ 224 (639)
+.+++|+..+++.+..+.+|.+ .|.+++|+|+ + .+|++|+.||.|++||+.+++.+..+ . +|.+.|.+++|
T Consensus 183 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW 261 (615)
T ss_dssp TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEE
T ss_pred CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEE
Confidence 4688999999999999999999 9999999999 8 89999999999999999999999998 6 89999999999
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCC
Q psy18073 225 LPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNV 302 (639)
Q Consensus 225 sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~ 302 (639)
+ ++++|++++.||.|++||+.+++....+..........+.++.++ ++..+++++. .|++||+.+++++..+.+|.
T Consensus 262 ~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~ 339 (615)
T 1pgu_A 262 L-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHN 339 (615)
T ss_dssp S-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCS
T ss_pred c-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCC
Confidence 9 999999999999999999997654321111111112567777776 7777777764 99999999999999998888
Q ss_pred ccEEEEEEcCCCCcEEEEEeCCCcEEEEECC------------------------------------CccccCCcccccc
Q psy18073 303 DSLHHVQFNPIDKHILASCASDRSIILYDTR------------------------------------ATVLSRNPDEYLR 346 (639)
Q Consensus 303 ~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~------------------------------------~~~~~~~~~~~~~ 346 (639)
+.|.+++| | + +++++.||.|++||++ +++..........
T Consensus 340 ~~v~~~~~-~-~---l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 414 (615)
T 1pgu_A 340 KGITALTV-N-P---LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA 414 (615)
T ss_dssp SCEEEEET-T-T---TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEE
T ss_pred CCEEEEEe-c-C---cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEE
Confidence 88888888 7 4 5555556665555543 2211000000000
Q ss_pred -c-------------------ccccccccc---CCCCCCCC----CCCCc-hhhhhhc-----------cccccceeeee
Q psy18073 347 -E-------------------TKTSIHRIP---RNIDPSLH----PFEGP-REYVRAL-----------NATKLERVFAK 387 (639)
Q Consensus 347 -~-------------------~~~~~~~~~---~~~~~~~~----~~~~~-~~~v~~~-----------~~~~~~~~~~~ 387 (639)
. ....+.... ....+.++ ..+.. ...+..+ .......+..+
T Consensus 415 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~ 494 (615)
T 1pgu_A 415 NNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI 494 (615)
T ss_dssp CSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEE
T ss_pred cCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEE
Confidence 0 000000000 00000000 00000 1111111 11223445556
Q ss_pred eeecCccceeeeccccccccc---cccccccccC-cccceeEEeeCC----------CCcceEEeccCCceEEEecCCcc
Q psy18073 388 PFVGPREYVRALNATKLERVF---AKPFVANLDG-HKDGISCLAKHP----------TKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-h~~~v~~v~~sp----------~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
.++..+..+........++.| ....+..+.+ |...|++++|+| ++ .+||+|+.||.|++||+.++
T Consensus 495 ~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 495 SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE-DLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSC-CEEEEEETTSCEEEEESSCT
T ss_pred EECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCC-CEEEEEcCCCcEEEEECCCC
Confidence 666666666655554444444 3455677777 999999999999 99 99999999999999999998
Q ss_pred -ccceeeeeeccccccccccCCcccccccccccccC-ccccc
Q psy18073 454 -SCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQ 493 (639)
Q Consensus 454 -~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~ 493 (639)
+++..+.+|.+.|++++|+|||. ++. .+.+. .+.|.
T Consensus 574 ~~~~~~~~~h~~~v~~l~~s~~~~-l~s---~~~d~~v~iw~ 611 (615)
T 1pgu_A 574 MKIIKALNAHKDGVNNLLWETPST-LVS---SGADACIKRWN 611 (615)
T ss_dssp TCCEEETTSSTTCEEEEEEEETTE-EEE---EETTSCEEEEE
T ss_pred ceechhhhcCccceEEEEEcCCCC-eEE---ecCCceEEEEe
Confidence 78899999999999999999997 443 33444 36775
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=5e-29 Score=256.63 Aligned_cols=301 Identities=13% Similarity=0.153 Sum_probs=212.4
Q ss_pred hhhcccCccccccCCC-CCCCCCCCCchhHHHhhhhhhhhhhhccccccccc-------------cccccEEEEEECCCC
Q psy18073 120 YLRETKTSIHRIPRNI-DPSLHPFEGPREYVRALNATKLERVFAKPFVANLD-------------GHKDGISCLAKHPTK 185 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~-------------~H~~~V~~l~~sp~~ 185 (639)
.+..+...|..+.+.+ +.......+.+ +.+++|++.++.....+. +|...|.+++|+|++
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSD------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETT------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCC------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 3445667777777776 55554444333 358889988877666554 699999999999944
Q ss_pred CeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcC---CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecC
Q psy18073 186 LSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLP---DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISK 262 (639)
Q Consensus 186 ~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp---~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~ 262 (639)
..+|++|+.||.|++||+.+++.+..+. +...+.++.|+| ++.++++++.||.|++||++++.... ....+.
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~----~~~~~~ 186 (408)
T 4a11_B 112 TGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH----ILQGHR 186 (408)
T ss_dssp TTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE----EECCCC
T ss_pred CcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee----eecCCC
Confidence 3899999999999999999999888876 788899999988 44599999999999999999876542 222356
Q ss_pred CeeEEeeecCCCC-EEEEcCC--eeEEEeCCCCc-eeeee---------------ecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 263 SVISSISHQRKSK-IFATCGD--QCQLWEHERNE-PIRAF---------------SWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 263 ~~v~~~~~~~~~~-~l~~~~~--~i~vwd~~~~~-~~~~~---------------~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
..|.+++|+|++. ++++++. .|++||++++. ++..+ .+|...|.+++|+| ++++|++++.
T Consensus 187 ~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 265 (408)
T 4a11_B 187 QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGT 265 (408)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEET
T ss_pred CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecC
Confidence 7899999999998 4767763 99999998775 44444 57889999999999 8999999999
Q ss_pred CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccc
Q psy18073 324 DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATK 403 (639)
Q Consensus 324 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (639)
||.|++||+++++............. ... ..+... .... .. +.+.+.+..+ .
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~~~~~------~~~--~~~~~~-----------~~~~-~~--~~~~~~~~~i------~ 317 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKVCNNS------KKG--LKFTVS-----------CGCS-SE--FVFVPYGSTI------A 317 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCCCCCC------SSC--CCCEEC-----------CSSS-SC--EEEEEETTEE------E
T ss_pred CCeEEEEECCCCccceeccccccccc------ccc--ceeEEe-----------cCCC-ce--EEEEecCCEE------E
Confidence 99999999998876543221110000 000 000000 0000 00 1111111111 1
Q ss_pred ccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeee
Q psy18073 404 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 461 (639)
Q Consensus 404 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~ 461 (639)
.+.......+..+.+|.+.|++++|+|++ .+|++|+.||.|++||+.+++.+.....
T Consensus 318 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 318 VYTVYSGEQITMLKGHYKTVDCCVFQSNF-QELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEEECC---------
T ss_pred EEECcCCcceeeeccCCCeEEEEEEcCCC-CEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 22223445567889999999999999999 9999999999999999999988776543
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=285.71 Aligned_cols=238 Identities=13% Similarity=0.115 Sum_probs=191.3
Q ss_pred cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q psy18073 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~ 248 (639)
..||.+.|++++|+|++ .+||+|+.||+|+|||..+++....+ .|..+|.+++|+| |++|++++.|++|++||+.++
T Consensus 13 ~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred ccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 35899999999999999 99999999999999999887776655 4888999999999 889999999999999999986
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCcee-----------eeeecCCccEEEEEEcCCCC
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPI-----------RAFSWNVDSLHHVQFNPIDK 315 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~-----------~~~~~h~~~v~~v~~sp~~~ 315 (639)
+. ...+.+...|.+++|+|++.++++|+. .|++||+++++.. ..+.+|.+.|.+++|+|+++
T Consensus 90 ~~-----~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 90 KV-----LTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp SE-----EEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred cE-----EEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 54 344456778999999999999999884 9999999988753 34567999999999999656
Q ss_pred cEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccc
Q psy18073 316 HILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395 (639)
Q Consensus 316 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 395 (639)
..|++|+.||+| +||+++++....+....... .+.+. .
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g---------------~~~~~-------------------------~- 202 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPF---------------APGGD-------------------------F- 202 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTT---------------CCCST-------------------------T-
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCc---------------CCCcc-------------------------c-
Confidence 899999999999 99999877654322110000 00000 0
Q ss_pred eeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccccee--e---ee---------
Q psy18073 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT--Y---QA--------- 461 (639)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~--l---~~--------- 461 (639)
. .....+|...|++++|+|+| .+||||+.||+|++||+++++++.. + .+
T Consensus 203 --------~--------~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~ 265 (902)
T 2oaj_A 203 --------S--------EKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIR 265 (902)
T ss_dssp --------C--------CCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCC
T ss_pred --------c--------cccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCC
Confidence 0 02235688899999999999 9999999999999999999987653 2 12
Q ss_pred ----eccccccccccC
Q psy18073 462 ----HDGHVRDTSTRP 473 (639)
Q Consensus 462 ----h~~~v~~v~~sp 473 (639)
|..+|.+++|+|
T Consensus 266 ~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 266 DSSTNAAKISKVYWMC 281 (902)
T ss_dssp CCSSCCCEEEEEEEEE
T ss_pred CCccccCCeeEEEEEe
Confidence 345799999954
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=5e-30 Score=288.93 Aligned_cols=340 Identities=18% Similarity=0.225 Sum_probs=241.8
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEe
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 202 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd 202 (639)
.+...+..+.+.++.......+.+ +.+++|++.+++.+..+.+|.+.|++++|+|++ .+|++|+.||.|++||
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWN 125 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEE
Confidence 345556666666655544443332 458899999999999999999999999999999 8999999999999999
Q ss_pred CCCC-ceEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEec-CCeeEEeeecC--CCCEE
Q psy18073 203 LTSQ-SCVQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIIS-KSVISSISHQR--KSKIF 277 (639)
Q Consensus 203 ~~~~-~~~~~~~~h~~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l 277 (639)
+.++ .....+.+|...|.+++|+| ++..|++++.||+|++||+.++... .....+ ...+.+++|+| ++.++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN----FTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS----EEEECCCTTCCCEEEECCSTTCCEE
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce----eEEecCCCCCEEEEEEEECCCCCEE
Confidence 9887 77788899999999999999 8899999999999999999876553 222222 36899999999 99999
Q ss_pred EEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccc--------
Q psy18073 278 ATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRE-------- 347 (639)
Q Consensus 278 ~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-------- 347 (639)
++++. .|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+.+++....+......
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 99885 999999999999999999999999999999 8889999999999999999987655433221100
Q ss_pred cccc--ccc----------cc-CCCCCCCCCCCC----------------------------------------chhhhh
Q psy18073 348 TKTS--IHR----------IP-RNIDPSLHPFEG----------------------------------------PREYVR 374 (639)
Q Consensus 348 ~~~~--~~~----------~~-~~~~~~~~~~~~----------------------------------------~~~~v~ 374 (639)
.... +.. .. ......+.|.+. ....+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (814)
T 3mkq_A 281 TGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360 (814)
T ss_dssp TCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCS
T ss_pred CCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCc
Confidence 0000 000 00 000000111100 000111
Q ss_pred hccccccceeee-------------------------eeeecCccceeeeccccccccccccccccccCcccceeEEeeC
Q psy18073 375 ALNATKLERVFA-------------------------KPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKH 429 (639)
Q Consensus 375 ~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 429 (639)
.+..+..++.++ +.+++++..+........+.. ...+.+|...+.+++|+
T Consensus 361 ~~~~spdg~~la~~~~~~~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l-----~~~~~~~~~~v~~~~~s 435 (814)
T 3mkq_A 361 SLAHSPNGRFVTVVGDGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKY-----YKNFKEVTSWSVPMHSA 435 (814)
T ss_dssp EEEECTTSSEEEEEETTEEEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEE-----EETTEECTTCCCCCSSC
T ss_pred eeEECCCCCEEEEecCCEEEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEE-----EECCCCccceEEcCCcC
Confidence 222222222111 111111111111111111111 23567788899999999
Q ss_pred CCCc--ceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccccccc
Q psy18073 430 PTKL--STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 430 p~~~--~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
|+|. .+|++++.||.|++||+.+++.+..+..|.. .++|+|||+.+++..
T Consensus 436 ~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~ 487 (814)
T 3mkq_A 436 IDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVN 487 (814)
T ss_dssp CCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEECTTSSEEEEEE
T ss_pred ccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEE
Confidence 9971 2789999999999999999999999987765 899999999888763
No 98
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.7e-29 Score=242.43 Aligned_cols=216 Identities=13% Similarity=0.114 Sum_probs=163.7
Q ss_pred hhhhhhhhcc---ccccccccccc-------------------------cEEEEEECCC----CCeeEEEeeC-------
Q psy18073 154 ATKLERVFAK---PFVANLDGHKD-------------------------GISCLAKHPT----KLSTIISGAY------- 194 (639)
Q Consensus 154 ~~~~~~~~~~---~~~~~l~~H~~-------------------------~V~~l~~sp~----~~~~l~sgs~------- 194 (639)
.+++|+...+ +.++++.+|+. .|++++|+|+ + ..+++++.
T Consensus 64 ~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~-~~l~s~g~~~~v~~l 142 (356)
T 2w18_A 64 VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEK-QVLLKSGNIKAVLGL 142 (356)
T ss_dssp EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CC-EEEEEEEEEEEEEEE
T ss_pred eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccc-cEEEeCCCeEEEEec
Confidence 4778887776 67778877775 4556666677 6 67776553
Q ss_pred -------------CCcEEEEeC-CCCceEEEEeccCCceEEEEEcC---CCCEEEEEecCCeEEEEeCCCCCCCcccceE
Q psy18073 195 -------------DGEVKVWNL-TSQSCVQTYQAHDGHVRDVCFLP---DGSQFLSVGIDNTIKTWSSELSESDHIVPLH 257 (639)
Q Consensus 195 -------------dg~i~vWd~-~~~~~~~~~~~h~~~V~~v~~sp---~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 257 (639)
|+.|++|++ .+|+.+..+.+|...++.++|+| ++.+|+++|.|++|+|||+.+++....+..+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 889999998 45888888888999999999988 7799999999999999999998764332111
Q ss_pred EEecCCeeEEeeecCCCCEEEE------------cCC--eeEEEeCCCCceeeee-----ecCCccEEEEEEcCCCCcEE
Q psy18073 258 TIISKSVISSISHQRKSKIFAT------------CGD--QCQLWEHERNEPIRAF-----SWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 258 ~~~~~~~v~~~~~~~~~~~l~~------------~~~--~i~vwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~~l 318 (639)
. .....+.+++|+|++.++++ |+. +|++||..+++.+..+ .+|.+.+.+..++ +.++
T Consensus 223 ~-~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~l 298 (356)
T 2w18_A 223 D-SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCA 298 (356)
T ss_dssp C----CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEE
T ss_pred C-cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEE
Confidence 0 01235777899999998743 443 8999999999987765 3676665544443 6789
Q ss_pred EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceee
Q psy18073 319 ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRA 398 (639)
Q Consensus 319 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (639)
|+|+.||+|+|||+.+++++
T Consensus 299 ASgS~DgTIkIWDl~tGk~l------------------------------------------------------------ 318 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCT------------------------------------------------------------ 318 (356)
T ss_dssp EEEETTSCEEEEETTTCSEE------------------------------------------------------------
T ss_pred EEEcCCCcEEEEECCCCcEE------------------------------------------------------------
Confidence 99999999999999987764
Q ss_pred eccccccccccccccccccCccccee-EEeeCCCCcceEEeccCCceEEEecC
Q psy18073 399 LNATKLERVFAKPFVANLDGHKDGIS-CLAKHPTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~~l~sgs~Dg~v~iWd~ 450 (639)
.++.+|.+.+. +++|+||| ++|+|||.|++|||||+
T Consensus 319 ---------------~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 319 ---------------ALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ---------------EEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEE
T ss_pred ---------------EEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecC
Confidence 56778887665 58999999 99999999999999995
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=4.2e-29 Score=262.21 Aligned_cols=239 Identities=20% Similarity=0.346 Sum_probs=200.6
Q ss_pred ccccccccccccE-EEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy18073 164 PFVANLDGHKDGI-SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKT 242 (639)
Q Consensus 164 ~~~~~l~~H~~~V-~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~i 242 (639)
+...++.+|.+.| .++.++ + .+|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .|++|+.||+|++
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~v 187 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRV 187 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEE
T ss_pred cceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEE
Confidence 3457889999885 677774 5 689999999999999999999999999999999999999988 9999999999999
Q ss_pred EeCCCCCCCcccceEEE-ecCCeeEEeeec--CCCCEEEEcCC--eeEEEeCCCCce-----------------------
Q psy18073 243 WSSELSESDHIVPLHTI-ISKSVISSISHQ--RKSKIFATCGD--QCQLWEHERNEP----------------------- 294 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~--~i~vwd~~~~~~----------------------- 294 (639)
||+++++.. ..+ .+...|.+++++ +++.++++++. .|++||++++..
T Consensus 188 wd~~~~~~~-----~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 188 WDIKKGCCT-----HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp EETTTTEEE-----EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred EECCCCcEE-----EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 999986543 333 356789999988 57788888874 999999987753
Q ss_pred eeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhh
Q psy18073 295 IRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVR 374 (639)
Q Consensus 295 ~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 374 (639)
+..+.+|...|.++. + +++++++|+.||+|++||+++++.+
T Consensus 263 ~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~~~~------------------------------------ 303 (464)
T 3v7d_B 263 VGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQMKCL------------------------------------ 303 (464)
T ss_dssp EEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTTEEE------------------------------------
T ss_pred EEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCCcEE------------------------------------
Confidence 556788999998874 5 6789999999999999999875543
Q ss_pred hccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 375 ALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
..+.+|...|.+++|+|++ .++++|+.||.|++||+.+++
T Consensus 304 ---------------------------------------~~~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 304 ---------------------------------------YILSGHTDRIYSTIYDHER-KRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ---------------------------------------EEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE
T ss_pred ---------------------------------------EEecCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc
Confidence 4567899999999999999 999999999999999999999
Q ss_pred cceeeeeeccccccccccCCcccccccccccccC-ccccccC
Q psy18073 455 CVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWES-SDAWQQH 495 (639)
Q Consensus 455 ~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~~-~~~~~~~ 495 (639)
++.++.+|...|.+++|++. .++ +.+.++ .+.|...
T Consensus 344 ~~~~~~~h~~~v~~~~~~~~--~l~---s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLSDK--FLV---SAAADGSIRGWDAN 380 (464)
T ss_dssp EEEEECCCSSCEEEEEECSS--EEE---EEETTSEEEEEETT
T ss_pred EEEEEeCCCCcEEEEEEcCC--EEE---EEeCCCcEEEEECC
Confidence 99999999999999999853 232 233444 3777543
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4e-29 Score=260.96 Aligned_cols=252 Identities=10% Similarity=0.013 Sum_probs=193.2
Q ss_pred cccccccEEEEEECCCCCeeE-EEeeCCCcEEEEeCC--CCceEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy18073 169 LDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVWNLT--SQSCVQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l-~sgs~dg~i~vWd~~--~~~~~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iw 243 (639)
..+|.+.|++++|+|+| .+| ++|+.||.|+|||+. +++.+..+. .|...|.+++|+|++++|++|+.||.|++|
T Consensus 98 ~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp --CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 34677789999999999 675 999999999999999 888888886 567899999999999999999999999999
Q ss_pred eCCCCCCCcccceEEEecCCeeEEeeecCC---CCEEEEcCC--eeEEEeCCCCceeee-eecCCccEEEEEEcCCCCcE
Q psy18073 244 SSELSESDHIVPLHTIISKSVISSISHQRK---SKIFATCGD--QCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKHI 317 (639)
Q Consensus 244 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~--~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~ 317 (639)
++.++............+...|.+++|+|+ +.++++++. .|++||+++++.+.. +.+|.+.|.+++|+ ++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~~ 254 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDYL 254 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STTE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCCE
Confidence 998766542011112235678999999999 989998884 999999999998887 56899999999999 7889
Q ss_pred EEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcccee
Q psy18073 318 LASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVR 397 (639)
Q Consensus 318 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 397 (639)
|++|+.|++|++||+++++++..+........ +. ...+.... .+
T Consensus 255 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~-------------------~~-------- 298 (450)
T 2vdu_B 255 LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP--YL-------NDQHLAPP-------------------RF-------- 298 (450)
T ss_dssp EEEEESSSEEEEEETTTCCEEEEEECHHHHGG--GC-------CTTSBC-------------------------------
T ss_pred EEEEeCCCeEEEEECCCCcEeeeecchhhhhh--hh-------hhcccccc-------------------cc--------
Confidence 99999999999999999876544321110000 00 00000000 00
Q ss_pred eeccccccccccccccccccCcccceeEEeeCCCCcceEEecc-CCceEEEecC--Ccc---ccceeeeeeccccccccc
Q psy18073 398 ALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA-YDGEVKVWNL--TSQ---SCVQTYQAHDGHVRDTST 471 (639)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs-~Dg~v~iWd~--~~~---~~~~~l~~h~~~v~~v~~ 471 (639)
....-..+...|.+++|+|++ .+|++++ .|+.|++||+ .++ +.+..+.+| +.|.+++|
T Consensus 299 --------------~~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~ 362 (450)
T 2vdu_B 299 --------------QNENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSA 362 (450)
T ss_dssp --------------------CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEE
T ss_pred --------------cccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEe
Confidence 001111345678999999999 8888888 8999999999 666 677788888 89999999
Q ss_pred cCCc
Q psy18073 472 RPAV 475 (639)
Q Consensus 472 spdg 475 (639)
+|++
T Consensus 363 ~~~~ 366 (450)
T 2vdu_B 363 HNDE 366 (450)
T ss_dssp ETTE
T ss_pred cCCc
Confidence 9965
No 101
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.9e-28 Score=253.39 Aligned_cols=279 Identities=13% Similarity=0.221 Sum_probs=199.3
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
.++.|+||++ ++||+|. |++|+|||+.+|+++..+. +|...|++|+|+|+|++||+|+.||+|++||+.+++...
T Consensus 107 y~~~l~wS~~--n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG--NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTT--SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCC--CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 3678999986 4777765 8999999999999887764 678889999999999999999999999999999876532
Q ss_pred ccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCc-eeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEE
Q psy18073 253 IVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNE-PIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~-~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~i 329 (639)
....+...+.++++ ++.++++|+. .+++||..... .+..+.+|...+..+.++| ++.++++++.||.|++
T Consensus 184 ----~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 184 ----NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNV 256 (420)
T ss_dssp ----EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred ----EEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeeccccceE
Confidence 22234457777766 4678888874 99999998754 6678899999999999999 8999999999999999
Q ss_pred EECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc
Q psy18073 330 YDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA 409 (639)
Q Consensus 330 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (639)
||..+++...............+ ..+.|+|.+. .+.....+..+..+ ..|+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~V------~~~~~~p~~~---------------~~la~~~gs~D~~I-----~iwd~~t 310 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTFTQHQGAV------KAVAWCPWQS---------------NVLATGGGTSDRHI-----RIWNVCS 310 (420)
T ss_dssp EESSCCSSCSCCSEEECCCSSCE------EEEEECTTCT---------------TEEEEEECTTTCEE-----EEEETTT
T ss_pred EeeccccccceeeeeecccCCce------eeeeeCCCcc---------------cEEEEEeecCCCEE-----EEEeCCc
Confidence 99988764432221111111111 1112222222 11111111111111 1122223
Q ss_pred ccccccccCcccceeEEeeCCCCcceEEe--ccCCceEEEecCCccccceeeeeeccccccccccCCccccccccccccc
Q psy18073 410 KPFVANLDGHKDGISCLAKHPTKLSTIIS--GAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 410 ~~~~~~~~~h~~~v~~v~~sp~~~~~l~s--gs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~~~~ 487 (639)
+..+..+.. ...|.++.|+|++ ..+++ |+.||.|+|||+.+++++.++.+|.+.|++++|+|||+.++. .+.|
T Consensus 311 ~~~~~~~~~-~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S---~s~D 385 (420)
T 4gga_A 311 GACLSAVDA-HSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS---AAAD 385 (420)
T ss_dssp TEEEEEEEC-SSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE---EETT
T ss_pred cccceeecc-ccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE---EecC
Confidence 334344444 4568899999999 66655 447999999999999999999999999999999999987653 4556
Q ss_pred Cc-ccccc
Q psy18073 488 SS-DAWQQ 494 (639)
Q Consensus 488 ~~-~~~~~ 494 (639)
.. +.|+-
T Consensus 386 ~tvriWdv 393 (420)
T 4gga_A 386 ETLRLWRC 393 (420)
T ss_dssp TEEEEECC
T ss_pred CeEEEEEC
Confidence 54 88864
No 102
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=3.2e-29 Score=272.90 Aligned_cols=300 Identities=16% Similarity=0.231 Sum_probs=230.0
Q ss_pred ccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhcc----cccccccccccc-EEEEEECC--CCCeeEEEeeCCC
Q psy18073 124 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK----PFVANLDGHKDG-ISCLAKHP--TKLSTIISGAYDG 196 (639)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~l~~H~~~-V~~l~~sp--~~~~~l~sgs~dg 196 (639)
+...+..+.+.++.....+.. -+.+.+|++.++ +.+..+.+|.+. |++++|+| ++ ++||+|+.||
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~-------~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg 88 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPC-------GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESG 88 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEE-------TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTS
T ss_pred ccCceeEEEECCCCCEEEEec-------CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEecCCC
Confidence 345566666666666555443 236889999988 889999999999 99999999 99 9999999999
Q ss_pred cEEEEeCCCC--------ceEEEEeccCCceEEEEEcCCCCEEEEEecC----CeEEEEeCCCCCCCcccceEEEecCCe
Q psy18073 197 EVKVWNLTSQ--------SCVQTYQAHDGHVRDVCFLPDGSQFLSVGID----NTIKTWSSELSESDHIVPLHTIISKSV 264 (639)
Q Consensus 197 ~i~vWd~~~~--------~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D----g~i~iwd~~~~~~~~~~~~~~~~~~~~ 264 (639)
.|+|||+.++ +.+..+.+|...|.+++|+|++++|++++.| +.|++||.. +.. .....+...
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~~~----~~~~~~~~~ 162 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--NSL----GEVSGHSQR 162 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--CEE----EECCSCSSC
T ss_pred EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--Ccc----eeeecCCcc
Confidence 9999999754 6778888999999999999999999999988 799999933 322 111234568
Q ss_pred eEEeeecCCCC-EEEEcCC--eeEEEeCCCCceeeeeecCCc---cEEEEEEcCCC-CcEEEEEeCCCcEEEEECCCccc
Q psy18073 265 ISSISHQRKSK-IFATCGD--QCQLWEHERNEPIRAFSWNVD---SLHHVQFNPID-KHILASCASDRSIILYDTRATVL 337 (639)
Q Consensus 265 v~~~~~~~~~~-~l~~~~~--~i~vwd~~~~~~~~~~~~h~~---~v~~v~~sp~~-~~~l~s~s~Dg~i~iwd~~~~~~ 337 (639)
|.+++|+|++. .+++++. .|++||+.+++.+..+.+|.. .|.+++|+| + +++|++++.||.|++||+++++.
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCE
Confidence 99999999997 6777764 999999999999999999999 999999999 6 99999999999999999998876
Q ss_pred cCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccc---cccccc
Q psy18073 338 SRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVF---AKPFVA 414 (639)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 414 (639)
+..+...... ....+..+.+. .+..+........++.| ....+.
T Consensus 242 ~~~~~~~~~~--------------------------------~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 242 LKYIEDDQEP--------------------------------VQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EEECCBTTBC--------------------------------CCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEecccccc--------------------------------cCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 6443110000 01111222222 22222222222222222 233344
Q ss_pred cccCc----ccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCC
Q psy18073 415 NLDGH----KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 415 ~~~~h----~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
.+..| ...+.++.|+ ++ .++++|+.||.|++||+.+++.+..+.+|.+.|.+++| |+
T Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp EEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT
T ss_pred EEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC
Confidence 55554 4678888886 77 89999999999999999999999999999999999999 88
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=7e-29 Score=255.03 Aligned_cols=239 Identities=17% Similarity=0.229 Sum_probs=195.7
Q ss_pred ccccccc--EEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec-cCCceEEEEEcCCCCEEEEEecCCeEEEEeC
Q psy18073 169 LDGHKDG--ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245 (639)
Q Consensus 169 l~~H~~~--V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~ 245 (639)
..+|... +.+++|++ ..+++++.||.|++||+.+++....+.. |.+.|.+++|+|++++|++|+.||.|++||+
T Consensus 87 ~~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp CTTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 3467665 45567765 3578888999999999999998887766 8999999999999999999999999999999
Q ss_pred CCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCC-CCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 246 ELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHE-RNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~-~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
.+++... ....+...|.+++|+ +..+++++. .|++||++ .+..+..+.+|.+.|.+++|+| ++.+|++|+
T Consensus 164 ~~~~~~~----~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~ 236 (401)
T 4aez_A 164 ESQTKLR----TMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGG 236 (401)
T ss_dssp TTCCEEE----EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred cCCeEEE----EecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEe
Confidence 9866432 122456789999994 567777764 99999998 5667888999999999999999 899999999
Q ss_pred CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccc
Q psy18073 323 SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNAT 402 (639)
Q Consensus 323 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (639)
.||.|++||++++...
T Consensus 237 ~d~~v~iwd~~~~~~~---------------------------------------------------------------- 252 (401)
T 4aez_A 237 NDNVVQIWDARSSIPK---------------------------------------------------------------- 252 (401)
T ss_dssp TTSCEEEEETTCSSEE----------------------------------------------------------------
T ss_pred CCCeEEEccCCCCCcc----------------------------------------------------------------
Confidence 9999999999875432
Q ss_pred cccccccccccccccCcccceeEEeeCCCCcceEEecc--CCceEEEecCCccccceeeeeeccccccccccCCcccccc
Q psy18073 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA--YDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 403 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs--~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~ 480 (639)
..+.+|...|.+++|+|++..++++|+ .||.|++||+.+++++..+. |...|.+++|+|+|..++.
T Consensus 253 -----------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 253 -----------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp -----------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEE
T ss_pred -----------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEE
Confidence 445679999999999998867888865 89999999999999999884 6678999999999988766
Q ss_pred cccccccCccccc
Q psy18073 481 TRSFGWESSDAWQ 493 (639)
Q Consensus 481 ~~~~~~~~~~~~~ 493 (639)
+..........|.
T Consensus 321 ~~g~~dg~i~v~~ 333 (401)
T 4aez_A 321 THGFPDNNLSIWS 333 (401)
T ss_dssp EECTTTCEEEEEE
T ss_pred EeecCCCcEEEEe
Confidence 4322222336665
No 104
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.7e-28 Score=245.59 Aligned_cols=274 Identities=10% Similarity=0.124 Sum_probs=204.2
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccc-----cccccEEEEEECCCCCeeEEEeeCCCc
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD-----GHKDGISCLAKHPTKLSTIISGAYDGE 197 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~-----~H~~~V~~l~~sp~~~~~l~sgs~dg~ 197 (639)
.+...+..+.+.++.......+ + +.+++|++.++.....+. +|...|.+++|+|++ ++|++|+.||.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~ 120 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-K------GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEAST 120 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-B------SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSE
T ss_pred cCCCceEEEEEecCCcEEEEcC-C------CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCc
Confidence 3455666666666655544443 2 468899988765443333 799999999999999 89999999999
Q ss_pred EEEEeCCCCc--eEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCC
Q psy18073 198 VKVWNLTSQS--CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKS 274 (639)
Q Consensus 198 i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 274 (639)
|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++||+++++.. ... .+...+.+++++|++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~-----~~~~~~~~~i~~~~~~~~~ 195 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV-----RQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----EEECCCSSCEEEEEECTTS
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee-----eeeecccCceEEEEECCCC
Confidence 9999999887 66778899999999999999999999999999999999976542 222 246789999999999
Q ss_pred CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccccccccc
Q psy18073 275 KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSI 352 (639)
Q Consensus 275 ~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 352 (639)
..+++++. .|++||+++++.+..+. |...+.+++|+| ++++|++++.||.|++||+++++..... ....
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~~~~-----~~~~-- 266 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKYQLH-----LHES-- 266 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEEEEC-----CCSS--
T ss_pred CEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeEEEc-----CCcc--
Confidence 99998874 99999999999887765 778999999999 8899999999999999999886542110 0000
Q ss_pred ccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc---ccccccccCcccceeEEeeC
Q psy18073 353 HRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA---KPFVANLDGHKDGISCLAKH 429 (639)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s 429 (639)
....+.++|++. .+........+..|+ ...+ ....|...|.+++|+
T Consensus 267 ----~v~~~~~~~~~~--------------------------~l~~~~~dg~i~~~~~~~~~~~-~~~~~~~~v~~~~~s 315 (337)
T 1gxr_A 267 ----CVLSLKFAYCGK--------------------------WFVSTGKDNLLNAWRTPYGASI-FQSKESSSVLSCDIS 315 (337)
T ss_dssp ----CEEEEEECTTSS--------------------------EEEEEETTSEEEEEETTTCCEE-EEEECSSCEEEEEEC
T ss_pred ----ceeEEEECCCCC--------------------------EEEEecCCCcEEEEECCCCeEE-EEecCCCcEEEEEEC
Confidence 001122222222 222111112222221 2221 234588899999999
Q ss_pred CCCcceEEeccCCceEEEecC
Q psy18073 430 PTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 430 p~~~~~l~sgs~Dg~v~iWd~ 450 (639)
|++ .+|++|+.||.|++||+
T Consensus 316 ~~~-~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 316 VDD-KYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTS-CEEEEEETTSCEEEEEE
T ss_pred CCC-CEEEEecCCCeEEEEEE
Confidence 999 99999999999999996
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.5e-29 Score=276.11 Aligned_cols=255 Identities=16% Similarity=0.206 Sum_probs=208.8
Q ss_pred hhhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhh--ccccccccccccccEEEEEECCC--CCeeEEEeeCC
Q psy18073 120 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPT--KLSTIISGAYD 195 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~l~~H~~~V~~l~~sp~--~~~~l~sgs~d 195 (639)
.+..+...|..+.++++.......+.+ +.+++|++. +++.+.++.+|.++|++++|+|+ + .+|++|+.|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~D 76 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 76 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETT------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETT
T ss_pred ecccCcceeEEEEECCCCCeEEEEECC------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCC
Confidence 355677888888888877665554443 358889887 66788899999999999999988 7 899999999
Q ss_pred CcEEEEeCCCCc--eEEEEeccCCceEEEEEcCC--CCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeec
Q psy18073 196 GEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPD--GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQ 271 (639)
Q Consensus 196 g~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~--~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~ 271 (639)
|.|++||+.+++ .+..+.+|.+.|++++|+|+ ++.+++|+.||+|++||++++..... .....+...|.+++|+
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~--~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP--IIIDAHAIGVNSASWA 154 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC--EEEECCSSCEEEEEEC
T ss_pred CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce--eEeecCCCceEEEEec
Confidence 999999999887 77788899999999999999 99999999999999999997644322 2334566799999999
Q ss_pred C-------------CCCEEEEcCC--eeEEEeCCCC----ceeeeeecCCccEEEEEEcCCC--CcEEEEEeCCCcEEEE
Q psy18073 272 R-------------KSKIFATCGD--QCQLWEHERN----EPIRAFSWNVDSLHHVQFNPID--KHILASCASDRSIILY 330 (639)
Q Consensus 272 ~-------------~~~~l~~~~~--~i~vwd~~~~----~~~~~~~~h~~~v~~v~~sp~~--~~~l~s~s~Dg~i~iw 330 (639)
| ++..+++|+. .|++||++++ .....+.+|.+.|.+++|+|++ +.+|++|+.||+|++|
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 9 5888888874 9999999887 4667788999999999999932 8999999999999999
Q ss_pred ECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccc
Q psy18073 331 DTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAK 410 (639)
Q Consensus 331 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (639)
|++++......
T Consensus 235 d~~~~~~~~~~--------------------------------------------------------------------- 245 (753)
T 3jro_A 235 TQDNEQGPWKK--------------------------------------------------------------------- 245 (753)
T ss_dssp EESSSSSCCBC---------------------------------------------------------------------
T ss_pred cCCCCCCccee---------------------------------------------------------------------
Confidence 99875321000
Q ss_pred cccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 411 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 411 ~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
......+|.+.|++++|+|+| .++++|+.||.|++||+.++.
T Consensus 246 -~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 246 -TLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp -CBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSSS
T ss_pred -EEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCCC
Confidence 013345688999999999999 999999999999999998543
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.3e-30 Score=260.87 Aligned_cols=253 Identities=10% Similarity=0.080 Sum_probs=198.6
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEe
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 202 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd 202 (639)
+...++..+.+.+|+.+.+.++.+..|+ + ++..+.++||...|.+++|+|+| .++++.+|+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--------d---~~~~~~l~gh~~~v~~V~FsPdg--------~~~~~~~~~ 73 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--------Q---PKYAKDINCNSKNLFHVKEFPLE--------FENKLDFEL 73 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--------E---ECCCSCCSSBGGGTEEEEEECCC--------CCCTTTTSC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--------c---ccccceecCCCccEEEEEECCCC--------CcceEEEEe
Confidence 4457888889999999988888887765 2 34445668999999999999997 466666666
Q ss_pred CCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCC-----eeEEeeecCCCCEE
Q psy18073 203 LTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKS-----VISSISHQRKSKIF 277 (639)
Q Consensus 203 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l 277 (639)
.... .+..+ .|...|.+++|||||.+||+++.||+|++||... . ...+.+.. .+.+++|||||+++
T Consensus 74 ~~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~-----l~~l~~~~~~~~~sv~svafSPDG~~L 144 (588)
T 2j04_A 74 AQQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M-----LTNLDSKGNLSSRTYHCFEWNPIESSI 144 (588)
T ss_dssp CCSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E-----EEECCCSSCSTTTCEEEEEECSSSSCE
T ss_pred CCCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e-----eeeccCCCccccccEEEEEEcCCCCEE
Confidence 4322 22222 5688999999999999999999999999999543 1 22223222 59999999999999
Q ss_pred EEcCC--eeEEEeCCCCce-------eeee----ecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccc
Q psy18073 278 ATCGD--QCQLWEHERNEP-------IRAF----SWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEY 344 (639)
Q Consensus 278 ~~~~~--~i~vwd~~~~~~-------~~~~----~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 344 (639)
++|+. +|++||+.++.. +.++ .+|.+.|.+++|+| ++ +++++.|++|++||+..+....
T Consensus 145 Asgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~----- 216 (588)
T 2j04_A 145 VVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQP----- 216 (588)
T ss_dssp EEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCC-----
T ss_pred EEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCcccc-----
Confidence 99994 999999998863 5676 66778999999999 66 8888999999999987654210
Q ss_pred ccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccc-cCcccce
Q psy18073 345 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANL-DGHKDGI 423 (639)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v 423 (639)
...++ .+|...|
T Consensus 217 -------------------------------------------------------------------~~~tL~~~h~~~V 229 (588)
T 2j04_A 217 -------------------------------------------------------------------VSRMIQNASRRKI 229 (588)
T ss_dssp -------------------------------------------------------------------CEEEEECCCSSCC
T ss_pred -------------------------------------------------------------------ceeeecccccCcE
Confidence 01334 4788999
Q ss_pred eEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccc--cCCcccccccc
Q psy18073 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST--RPAVETTDLTR 482 (639)
Q Consensus 424 ~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~--spdg~~~~~~~ 482 (639)
.+++|+ | ..||+++ ||+|++||+.+++......+|.+.|.+++| +||+..++++.
T Consensus 230 ~svaFs--g-~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 230 TDLKIV--D-YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CCEEEE--T-TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred EEEEEE--C-CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 999999 6 7899998 699999999988774433389999999999 99997776654
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=8.6e-29 Score=249.52 Aligned_cols=260 Identities=10% Similarity=0.145 Sum_probs=184.5
Q ss_pred hhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE-EEEe
Q psy18073 157 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF-LSVG 235 (639)
Q Consensus 157 ~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-~s~s 235 (639)
+|.+.+.+.+.++.+|.+.|++++|+||| .+||+|+.|| ++|||+.+++.+.... ...+..+++.++++.+ ++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEEC
Confidence 45566677777889999999999999999 8999998775 7899998877665543 2358889999988887 5677
Q ss_pred cCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCC-ceeeeeecCCccEEEEEEcCCC
Q psy18073 236 IDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERN-EPIRAFSWNVDSLHHVQFNPID 314 (639)
Q Consensus 236 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~-~~~~~~~~h~~~v~~v~~sp~~ 314 (639)
.|++|++||+.+++. ...+.....|.++.++++...+ +.++.|++||+.++ +.+..+.. +...+++++
T Consensus 79 ~d~~v~iWd~~~~~~-----~~~~~~~~~v~~v~~~~~~~~~-~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-- 147 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQD-----VSRIKVDAPVKDLFLSREFIVV-SYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-- 147 (355)
T ss_dssp STTEEEEEETTTTEE-----EEEEECSSCEEEEEECSSEEEE-EETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--
T ss_pred CccEEEEEECCCCcE-----EEEEECCCceEEEEEcCCEEEE-EEcCEEEEEECCCCceeeEEecc---CCceEEEEc--
Confidence 889999999998765 4455567799999999876443 34569999999998 77777765 444566776
Q ss_pred CcEEEE--EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecC
Q psy18073 315 KHILAS--CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGP 392 (639)
Q Consensus 315 ~~~l~s--~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 392 (639)
.+++. |+.||.|++||++++..........
T Consensus 148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~----------------------------------------------- 179 (355)
T 3vu4_A 148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV----------------------------------------------- 179 (355)
T ss_dssp -TEEEEEESSCTTCEEEEECCC----------------------------------------------------------
T ss_pred -cEEEEeCCCcCcEEEEEECCCCCccccccccc-----------------------------------------------
Confidence 45555 6899999999998764321100000
Q ss_pred ccceeeecccccccccc-ccccccccCcccceeEEeeCCCCcceEEeccCCce-EEEecCCccccceeee-e-ecccccc
Q psy18073 393 REYVRALNATKLERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE-VKVWNLTSQSCVQTYQ-A-HDGHVRD 468 (639)
Q Consensus 393 ~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~-v~iWd~~~~~~~~~l~-~-h~~~v~~ 468 (639)
.... .+.+..+.+|.+.|++++|+|+| .+|||||.||+ |++||+++++++.++. + |.+.|.+
T Consensus 180 -------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~ 245 (355)
T 3vu4_A 180 -------------QQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVD 245 (355)
T ss_dssp --------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEE
T ss_pred -------------cccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEE
Confidence 0000 01136678999999999999999 99999999998 9999999999999998 5 9999999
Q ss_pred ccccCCcccccccccccccC-ccccccCC
Q psy18073 469 TSTRPAVETTDLTRSFGWES-SDAWQQHD 496 (639)
Q Consensus 469 v~~spdg~~~~~~~~~~~~~-~~~~~~~d 496 (639)
++|+|||..++.+. .+. .+.|....
T Consensus 246 ~~~s~~~~~l~s~s---~d~~v~iw~~~~ 271 (355)
T 3vu4_A 246 MKWSTDGSKLAVVS---DKWTLHVFEIFN 271 (355)
T ss_dssp EEECTTSCEEEEEE---TTCEEEEEESSC
T ss_pred EEECCCCCEEEEEE---CCCEEEEEEccC
Confidence 99999998776543 343 37886543
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.3e-29 Score=248.74 Aligned_cols=233 Identities=11% Similarity=0.088 Sum_probs=182.1
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCC---------CCceEEEEe-ccCCceEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT---------SQSCVQTYQ-AHDGHVRDV 222 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~---------~~~~~~~~~-~h~~~V~~v 222 (639)
..+++|++.+++.+..+. ...|.+++|+|+ +++|+.|++|++|+.. +++.+..+. +|.+.|.++
T Consensus 58 g~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 131 (343)
T 3lrv_A 58 GALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYM 131 (343)
T ss_dssp TEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEE
Confidence 358999999988888776 578889999986 9999999999999665 555455554 677899999
Q ss_pred EEcC--CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCcee-ee
Q psy18073 223 CFLP--DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPI-RA 297 (639)
Q Consensus 223 ~~sp--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~-~~ 297 (639)
+|+| +++++++++.||+|++||+++++... .....+...+.+++|+|++.++++|+. .|++||+++++.+ ..
T Consensus 132 ~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~---~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~ 208 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI---VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR 208 (343)
T ss_dssp ECCC---CCEEEEEETTCCEEEEESSSSCEEE---EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE
T ss_pred EcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE---EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE
Confidence 9999 99999999999999999999765421 111223457999999999999999874 9999999999987 78
Q ss_pred eec-CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 298 FSW-NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 298 ~~~-h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
+.+ |.++|.+++|+| ++.+|++++ |++|++||+++++....+
T Consensus 209 ~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~----------------------------------- 251 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAY----------------------------------- 251 (343)
T ss_dssp CCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSS-----------------------------------
T ss_pred EeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceee-----------------------------------
Confidence 888 999999999999 899999999 559999999987654321
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccce--eEEeeCCCCcceEEeccC-CceEEEecCCcc
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI--SCLAKHPTKLSTIISGAY-DGEVKVWNLTSQ 453 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~~~~~l~sgs~-Dg~v~iWd~~~~ 453 (639)
..+..|...+ .+++|+|+| .+|++|+. |+.|++|++..+
T Consensus 252 -------------------------------------~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 252 -------------------------------------PTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -------------------------------------CCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECTT
T ss_pred -------------------------------------cccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEccc
Confidence 1112233333 469999999 99999888 999999999766
Q ss_pred ccceeeeeeccccccccccC
Q psy18073 454 SCVQTYQAHDGHVRDTSTRP 473 (639)
Q Consensus 454 ~~~~~l~~h~~~v~~v~~sp 473 (639)
...... .++..++|+|
T Consensus 294 ~~~~~~----~~~~~~~~~~ 309 (343)
T 3lrv_A 294 TKNWTK----DEESALCLQS 309 (343)
T ss_dssp TCSEEE----EEEEECCC--
T ss_pred ccceEe----cCceeEecCc
Confidence 544433 5566777777
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=3.3e-28 Score=252.27 Aligned_cols=237 Identities=21% Similarity=0.302 Sum_probs=189.6
Q ss_pred hhhhhhhhc----------cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce-------EEEEeccC
Q psy18073 154 ATKLERVFA----------KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC-------VQTYQAHD 216 (639)
Q Consensus 154 ~~~~~~~~~----------~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~-------~~~~~~h~ 216 (639)
.+++|++.. ...+..+.+|...|++++|+|++..+|++|+.||.|++||+.++.. ...+.+|.
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~ 231 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT 231 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC
Confidence 578898876 5677889999999999999999933999999999999999987422 45677899
Q ss_pred CceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcccceEE-EecCCeeEEeeecCCCC-EEEEcCC--eeEEEeCCC
Q psy18073 217 GHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHT-IISKSVISSISHQRKSK-IFATCGD--QCQLWEHER 291 (639)
Q Consensus 217 ~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~--~i~vwd~~~ 291 (639)
..|.+++|+| ++.+|++++.||.|++||+++...... ... ..+...|.+++|+|++. ++++|+. .|++||+++
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~--~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP--SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC--SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc--eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 9999999999 788999999999999999997642111 222 25667899999999887 5777763 999999998
Q ss_pred -CceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCch
Q psy18073 292 -NEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPR 370 (639)
Q Consensus 292 -~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (639)
+.++..+.+|...|.+++|+|++..+|++++.||.|++||+...........
T Consensus 310 ~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------------------------- 362 (430)
T 2xyi_A 310 LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED--------------------------- 362 (430)
T ss_dssp TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH---------------------------
T ss_pred CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc---------------------------
Confidence 5688999999999999999995557899999999999999976322110000
Q ss_pred hhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecC
Q psy18073 371 EYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 371 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~ 450 (639)
.......++..+.+|...|++++|+|+++.+|++++.||.|+||++
T Consensus 363 ----------------------------------~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 363 ----------------------------------AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp ----------------------------------HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred ----------------------------------cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 0000111235667899999999999999339999999999999998
Q ss_pred Ccc
Q psy18073 451 TSQ 453 (639)
Q Consensus 451 ~~~ 453 (639)
..+
T Consensus 409 ~~~ 411 (430)
T 2xyi_A 409 AEN 411 (430)
T ss_dssp CHH
T ss_pred ccc
Confidence 754
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.7e-28 Score=250.86 Aligned_cols=244 Identities=14% Similarity=0.182 Sum_probs=195.2
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC----ceEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCC
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----SCVQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSE 249 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~----~~~~~~~~h~~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~ 249 (639)
....++++|+...++++|+.||.|+|||+.+. ..+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 34568999988455567899999999998654 23456789999999999999 99999999999999999999864
Q ss_pred CCcc--cceEE-EecCCeeEEeeecCCC-CEEEEcCC--eeEEEeCCCCceeeee--ecCCccEEEEEEcCCCCcEEEEE
Q psy18073 250 SDHI--VPLHT-IISKSVISSISHQRKS-KIFATCGD--QCQLWEHERNEPIRAF--SWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 250 ~~~~--~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~--~i~vwd~~~~~~~~~~--~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
.... .+... ..+...|.+++|+|++ .++++++. .|++||+++++.+..+ .+|.+.|.+++|+| ++.+|+++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 194 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTS 194 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEE
Confidence 3211 11223 3456799999999998 68888774 8999999999999999 88999999999999 88999999
Q ss_pred eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecc
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
+.||.|++||+++++.+
T Consensus 195 ~~d~~i~iwd~~~~~~~--------------------------------------------------------------- 211 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVV--------------------------------------------------------------- 211 (402)
T ss_dssp ETTSEEEEEETTTTEEE---------------------------------------------------------------
T ss_pred ecCCcEEEEeCCCCcee---------------------------------------------------------------
Confidence 99999999999876543
Q ss_pred ccccccccccccccc-cCcccc-eeEEeeCCCCcceEEec---cCCceEEEecCCcccc-ceeee-eeccccccccccCC
Q psy18073 402 TKLERVFAKPFVANL-DGHKDG-ISCLAKHPTKLSTIISG---AYDGEVKVWNLTSQSC-VQTYQ-AHDGHVRDTSTRPA 474 (639)
Q Consensus 402 ~~~~~~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~~l~sg---s~Dg~v~iWd~~~~~~-~~~l~-~h~~~v~~v~~spd 474 (639)
..+ .+|.+. +.+++|+|++ .+|++| +.||.|++||+++++. +.... .|...+..++|+|+
T Consensus 212 ------------~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 212 ------------AEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp ------------EEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred ------------eeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 333 467665 8999999999 999999 8999999999998775 33333 56788999999999
Q ss_pred cccccccccccccCccccccCC
Q psy18073 475 VETTDLTRSFGWESSDAWQQHD 496 (639)
Q Consensus 475 g~~~~~~~~~~~~~~~~~~~~d 496 (639)
++.++++.+ +....+.|....
T Consensus 279 ~~~l~~~g~-~dg~i~i~d~~~ 299 (402)
T 2aq5_A 279 TNIVYLCGK-GDSSIRYFEITS 299 (402)
T ss_dssp TTEEEEEET-TCSCEEEEEECS
T ss_pred CCEEEEEEc-CCCeEEEEEecC
Confidence 988765432 122347776443
No 111
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.5e-29 Score=257.33 Aligned_cols=209 Identities=12% Similarity=0.119 Sum_probs=163.3
Q ss_pred hcccCccccccCCC-CCCCCCCCCchhHHHhhhhhhhhhhhc---cccc-cccc-cccccEEEEEECCCCCeeEEEeeCC
Q psy18073 122 RETKTSIHRIPRNI-DPSLHPFEGPREYVRALNATKLERVFA---KPFV-ANLD-GHKDGISCLAKHPTKLSTIISGAYD 195 (639)
Q Consensus 122 ~~~~~~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~-~~l~-~H~~~V~~l~~sp~~~~~l~sgs~d 195 (639)
..+...|..+.+.+ +.......+.+ ..+++|++.+ +... ..+. +|.+.|++++|+|++ .+|++|+.|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQ------GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF-DAFAVSSKD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETT------SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS-SEEEEEETT
T ss_pred cCCCCceEEEEECCCCCCEEEEecCC------ceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC-CEEEEEeCC
Confidence 44567777777777 65555544433 3578888876 3322 1222 699999999999999 899999999
Q ss_pred CcEEEEeCC---CCceEEEEec------------cCCceEEEE--EcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEE
Q psy18073 196 GEVKVWNLT---SQSCVQTYQA------------HDGHVRDVC--FLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHT 258 (639)
Q Consensus 196 g~i~vWd~~---~~~~~~~~~~------------h~~~V~~v~--~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 258 (639)
|+|++||+. +++.+..+.+ +...+.++. ++|++.+|++|+.||+|++||+++++.. ..
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~ 207 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL-----QI 207 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE-----EE
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee-----EE
Confidence 999999994 5655554432 455666776 5678999999999999999999986653 33
Q ss_pred Ee---cCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeee-cCCccEEEEEEcCC---CCcEEEEEeCCCcEEE
Q psy18073 259 II---SKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFS-WNVDSLHHVQFNPI---DKHILASCASDRSIIL 329 (639)
Q Consensus 259 ~~---~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~-~h~~~v~~v~~sp~---~~~~l~s~s~Dg~i~i 329 (639)
+. +...|.+++|+|++.++++++. .|++||+++++++..+. .|...|.+++|+|. ++.+|++|+.||+|++
T Consensus 208 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 208 IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 33 4679999999999999999885 89999999999999886 78889999976652 6779999999999999
Q ss_pred EECCCccccCCcc
Q psy18073 330 YDTRATVLSRNPD 342 (639)
Q Consensus 330 wd~~~~~~~~~~~ 342 (639)
||+++++.+..+.
T Consensus 288 wd~~~~~~~~~~~ 300 (437)
T 3gre_A 288 WNFVKGHCQYAFI 300 (437)
T ss_dssp EETTTTEEEEEEE
T ss_pred EEcCCCcEEEEEE
Confidence 9999888665443
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-28 Score=253.59 Aligned_cols=240 Identities=10% Similarity=0.100 Sum_probs=194.0
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc---eEEEEec-----------------------------------
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQA----------------------------------- 214 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~---~~~~~~~----------------------------------- 214 (639)
..++.+++|+|+| ++|+++ .++.|++||+.+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~dg-~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSRDG-SLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECSSS-SEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecCCC-CEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 4588999999999 766655 57899999999998 6666553
Q ss_pred -------------------cCCceEEEEEcCCCCEE-EEEecCCeEEEEeCC--CCCCCcccceEEEecCCeeEEeeecC
Q psy18073 215 -------------------HDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSE--LSESDHIVPLHTIISKSVISSISHQR 272 (639)
Q Consensus 215 -------------------h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~--~~~~~~~~~~~~~~~~~~v~~~~~~~ 272 (639)
|.+.|++++|+|++++| ++++.||+|++||+. ++..... +....+...+.+++|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~--~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL--RKRFCFSKRPNAISIAE 159 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEE--EEEEECSSCEEEEEECT
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeee--eecccCCCCceEEEEcC
Confidence 33479999999999996 899999999999998 5554322 12224567899999999
Q ss_pred CCCEEEEcCC--eeEEEeCCCCceee----eeecCCccEEEEEEcCCC---CcEEEEEeCCCcEEEEECCCccccCCccc
Q psy18073 273 KSKIFATCGD--QCQLWEHERNEPIR----AFSWNVDSLHHVQFNPID---KHILASCASDRSIILYDTRATVLSRNPDE 343 (639)
Q Consensus 273 ~~~~l~~~~~--~i~vwd~~~~~~~~----~~~~h~~~v~~v~~sp~~---~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 343 (639)
++.++++++. .+.+|++.+++... .+.+|.+.|.+++|+| + +.+|++|+.|++|++||++++..+.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~---- 234 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVD---- 234 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEE----
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceee----
Confidence 9999999874 89999998887554 7889999999999999 7 8899999999999999998754321
Q ss_pred cccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccce
Q psy18073 344 YLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423 (639)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 423 (639)
..+.+|...|
T Consensus 235 ----------------------------------------------------------------------~~~~~h~~~v 244 (450)
T 2vdu_B 235 ----------------------------------------------------------------------KWLFGHKHFV 244 (450)
T ss_dssp ----------------------------------------------------------------------EECCCCSSCE
T ss_pred ----------------------------------------------------------------------eeecCCCCce
Confidence 1246899999
Q ss_pred eEEeeCCCCcceEEeccCCceEEEecCCccccceeeeee-------------------------ccccccccccCCcccc
Q psy18073 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-------------------------DGHVRDTSTRPAVETT 478 (639)
Q Consensus 424 ~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h-------------------------~~~v~~v~~spdg~~~ 478 (639)
++++|+ ++ .+|++|+.||+|++||+.+++++..+..+ ...|.+++|+|++..+
T Consensus 245 ~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 245 SSICCG-KD-YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEC-ST-TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred EEEEEC-CC-CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 999999 88 99999999999999999999998888643 2468899999999877
Q ss_pred cccccccccCcccccc
Q psy18073 479 DLTRSFGWESSDAWQQ 494 (639)
Q Consensus 479 ~~~~~~~~~~~~~~~~ 494 (639)
+++.. +......|..
T Consensus 323 ~~~~~-~d~~i~iw~~ 337 (450)
T 2vdu_B 323 AFFVE-ATKCIIILEM 337 (450)
T ss_dssp EEEET-TCSEEEEEEE
T ss_pred EEEEC-CCCeEEEEEe
Confidence 65531 2223467765
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=2e-28 Score=250.48 Aligned_cols=220 Identities=14% Similarity=0.077 Sum_probs=159.3
Q ss_pred hhhhhhhhhccc-----cccccccccccEEEEEECC--------CCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCce
Q psy18073 153 NATKLERVFAKP-----FVANLDGHKDGISCLAKHP--------TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 219 (639)
Q Consensus 153 ~~~~~~~~~~~~-----~~~~l~~H~~~V~~l~~sp--------~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V 219 (639)
..+++|+...+. .+..+.||++.|++++|+| |+ ++|||||.|++|+|||+.++.++..+.+|.++|
T Consensus 111 ~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v 189 (393)
T 4gq1_A 111 NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILAGYPLSSPG 189 (393)
T ss_dssp SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEEEEECSSCE
T ss_pred CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeeeecCCCCCc
Confidence 468999987664 4567899999999999998 77 899999999999999999988888888999999
Q ss_pred EEEEEcCCC-CEEEEEecCCeEEEEeCCCCCCCcccce---------------------EEEecCCeeEEeeec-CCCCE
Q psy18073 220 RDVCFLPDG-SQFLSVGIDNTIKTWSSELSESDHIVPL---------------------HTIISKSVISSISHQ-RKSKI 276 (639)
Q Consensus 220 ~~v~~sp~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---------------------~~~~~~~~v~~~~~~-~~~~~ 276 (639)
.+++|+|++ .+|++++.||+|++||++++........ ....+...+.++.|+ +++..
T Consensus 190 ~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~ 269 (393)
T 4gq1_A 190 ISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSG 269 (393)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCE
T ss_pred EEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCE
Confidence 999999987 5899999999999999988654322111 111234567778876 79999
Q ss_pred EEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcC-------------------CCCcEEEEEeCCCcEEEEECCCc
Q psy18073 277 FATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNP-------------------IDKHILASCASDRSIILYDTRAT 335 (639)
Q Consensus 277 l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp-------------------~~~~~l~s~s~Dg~i~iwd~~~~ 335 (639)
+++++. .+++||+..++....+..|...+..+.+.| .++.++++|+.||+|++||+.++
T Consensus 270 l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~ 349 (393)
T 4gq1_A 270 ILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK 349 (393)
T ss_dssp EEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT
T ss_pred EEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC
Confidence 998884 999999998887777776665555444433 24457788899999999999876
Q ss_pred cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccc
Q psy18073 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVAN 415 (639)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (639)
... ..
T Consensus 350 ~~~---------------------------------------------------------------------------~~ 354 (393)
T 4gq1_A 350 DSN---------------------------------------------------------------------------SI 354 (393)
T ss_dssp TCC---------------------------------------------------------------------------EE
T ss_pred cEE---------------------------------------------------------------------------EE
Confidence 543 33
Q ss_pred ccCcccceeEEeeCCCCcceEEeccCCceEEEecC
Q psy18073 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 416 ~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~ 450 (639)
+.+|..+|.+|+|+||| ++||+++.||. .+|.+
T Consensus 355 ~~~~~~~V~svafspdG-~~LA~as~~Gv-~lvrL 387 (393)
T 4gq1_A 355 PIQLGMPIVDFCWHQDG-SHLAIATEGSV-LLTRL 387 (393)
T ss_dssp EEECSSCEEEEEECTTS-SEEEEEESSEE-EEEEE
T ss_pred ecCCCCcEEEEEEcCCC-CEEEEEeCCCe-EEEEE
Confidence 45688899999999999 99999998874 44443
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=246.81 Aligned_cols=234 Identities=11% Similarity=0.040 Sum_probs=180.4
Q ss_pred EEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCC------
Q psy18073 176 ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE------ 249 (639)
Q Consensus 176 V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~------ 249 (639)
.....+.+++ .+|++|+.||+|++||+.+++.+..+. .+.|.++.|+|+ +++++.|++|++|+.....
T Consensus 39 ~~~~~~~~d~-~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 39 ELNKSMYYDK-WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp EECSSSSEEE-EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhhhhhcCCC-CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC
Confidence 3334556677 899999999999999999999888886 567889999988 9999999999999876321
Q ss_pred CCcccceEEEecCCeeEEeeecC--CCCEEEEcCC--eeEEEeCCCCceeeeeec-CCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 250 SDHIVPLHTIISKSVISSISHQR--KSKIFATCGD--QCQLWEHERNEPIRAFSW-NVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~--~i~vwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
...........+...|.+++++| ++.++++++. .|++||+++++.+..... |...|.+++|+| ++.+|++|+.|
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~d 191 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPD 191 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTT
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCC
Confidence 11111223334446899999999 9999998874 999999999998776644 455899999999 89999999999
Q ss_pred CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccc
Q psy18073 325 RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKL 404 (639)
Q Consensus 325 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (639)
|.|++||+++++...
T Consensus 192 g~i~iwd~~~~~~~~----------------------------------------------------------------- 206 (343)
T 3lrv_A 192 GILDVYNLSSPDQAS----------------------------------------------------------------- 206 (343)
T ss_dssp SCEEEEESSCTTSCC-----------------------------------------------------------------
T ss_pred CEEEEEECCCCCCCc-----------------------------------------------------------------
Confidence 999999998765430
Q ss_pred cccccccccccccC-cccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeee---eccccc--cccccCCcccc
Q psy18073 405 ERVFAKPFVANLDG-HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA---HDGHVR--DTSTRPAVETT 478 (639)
Q Consensus 405 ~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~---h~~~v~--~v~~spdg~~~ 478 (639)
..+.+ |.++|++++|+|+| .+|++|+ |+.|++||+++++.+..+.. |...+. +++|+|+|+.+
T Consensus 207 ---------~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 207 ---------SRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp ---------EECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred ---------cEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 23455 99999999999999 9999999 55999999999988776654 555555 49999999887
Q ss_pred cccccccccCccccc
Q psy18073 479 DLTRSFGWESSDAWQ 493 (639)
Q Consensus 479 ~~~~~~~~~~~~~~~ 493 (639)
+.+.. +....+.|.
T Consensus 276 ~~~s~-~d~~i~v~~ 289 (343)
T 3lrv_A 276 IAYSN-ESNSLTIYK 289 (343)
T ss_dssp EEEET-TTTEEEEEE
T ss_pred EEecC-CCCcEEEEE
Confidence 76432 122336664
No 115
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.2e-28 Score=238.42 Aligned_cols=283 Identities=16% Similarity=0.179 Sum_probs=206.3
Q ss_pred hhcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEE
Q psy18073 121 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200 (639)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~v 200 (639)
+..+...|..+.+ ++.......+.+ +.+++|++.+++....+.+|.+.|.+++|+|++ .+|++|+.||.|++
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~d------g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRD------GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMING 85 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETT------SEEEEEEESSSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcC------CcEEEEECCCCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEE
Confidence 3445566666655 444433333322 358899999888899999999999999999999 99999999999999
Q ss_pred EeCCCC---ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecC-CCCE
Q psy18073 201 WNLTSQ---SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQR-KSKI 276 (639)
Q Consensus 201 Wd~~~~---~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 276 (639)
|++... +.+..+.+|...|.+++| +++++++++.||.|++||. +... .....+...+.++.++| ++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~--~~~~----~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE--GSLV----YNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET--TEEE----EEEECCSSCEEEEEEEETTTTE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC--CcEE----EecccCCCceeEEEEccCCCCE
Confidence 998654 567788999999999999 6789999999999999992 2221 22234567899999988 8888
Q ss_pred EEEcCC--eeEEEeCCCCceeeeeec-CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccc
Q psy18073 277 FATCGD--QCQLWEHERNEPIRAFSW-NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIH 353 (639)
Q Consensus 277 l~~~~~--~i~vwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 353 (639)
+++++. .|++|| .++....+.. |...|.+++|+| ++. +++++.||.|++||+++++.+..+... .
T Consensus 158 l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~----~---- 225 (313)
T 3odt_A 158 FLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGH----E---- 225 (313)
T ss_dssp EEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECC----S----
T ss_pred EEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcC----C----
Confidence 888874 999999 5667777777 899999999999 666 999999999999999988765443211 0
Q ss_pred cccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCc
Q psy18073 354 RIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKL 433 (639)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 433 (639)
..+..+.....+. +...+.+..+ ..++......+..+.+|...|.+++|+|++
T Consensus 226 -----------------~~i~~~~~~~~~~---l~~~~~dg~v------~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~- 278 (313)
T 3odt_A 226 -----------------SFVYCIKLLPNGD---IVSCGEDRTV------RIWSKENGSLKQVITLPAISIWSVDCMSNG- 278 (313)
T ss_dssp -----------------SCEEEEEECTTSC---EEEEETTSEE------EEECTTTCCEEEEEECSSSCEEEEEECTTS-
T ss_pred -----------------ceEEEEEEecCCC---EEEEecCCEE------EEEECCCCceeEEEeccCceEEEEEEccCC-
Confidence 1111111111111 1111111111 112223345567788999999999999999
Q ss_pred ceEEeccCCceEEEecCCccccceee
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTY 459 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l 459 (639)
. +++|+.||.|++||+++++.+...
T Consensus 279 ~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 279 D-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp C-EEEEETTSCEEEEESCGGGCCC--
T ss_pred C-EEEEeCCCcEEEEeCCCCceeehh
Confidence 6 667899999999999998877654
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=9.5e-28 Score=243.30 Aligned_cols=251 Identities=16% Similarity=0.159 Sum_probs=193.5
Q ss_pred hhhcccCccccccCCCCC---CCCCCCCchhHHHhhhhhhhhhhhc-cccc-cccccccccEEEEEECCCCCeeEEEeeC
Q psy18073 120 YLRETKTSIHRIPRNIDP---SLHPFEGPREYVRALNATKLERVFA-KPFV-ANLDGHKDGISCLAKHPTKLSTIISGAY 194 (639)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~-~~l~~H~~~V~~l~~sp~~~~~l~sgs~ 194 (639)
.+..+...|..+.+.++. ......+.+ +.+++|++.+ +..+ ..+.+|.+.|++++|+|++ .+|++|+.
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~ 106 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASC 106 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS-SEEEEEET
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC-CEEEEEcC
Confidence 455677778888777763 333333333 3588999886 4444 7889999999999999999 89999999
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEE--cCCCCEEEEEecCCeEEEEeCCCCCCCcccceEE--------------
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCF--LPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHT-------------- 258 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~--sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-------------- 258 (639)
||.|++||+.+++.+. +.+|...|.+++| +|++++|++++.||.|++||+++++....+....
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999999988776 5679999999999 8999999999999999999999876542221100
Q ss_pred ---------------------E--ecCCeeEEeeecCCCCE----EEEcCC--eeEEEeCCCC---ceeeeeecCCc---
Q psy18073 259 ---------------------I--ISKSVISSISHQRKSKI----FATCGD--QCQLWEHERN---EPIRAFSWNVD--- 303 (639)
Q Consensus 259 ---------------------~--~~~~~v~~~~~~~~~~~----l~~~~~--~i~vwd~~~~---~~~~~~~~h~~--- 303 (639)
. .......++.+.++... +++++. .|++||++.. ..+..+.+|..
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence 0 00122334444333322 555553 8999999887 56778888876
Q ss_pred ---------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhh
Q psy18073 304 ---------SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVR 374 (639)
Q Consensus 304 ---------~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 374 (639)
.|.+++|+| ++++|++|+.||.|++||+++++++
T Consensus 266 ~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~------------------------------------ 308 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKL------------------------------------ 308 (368)
T ss_dssp --CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEE------------------------------------
T ss_pred cccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEE------------------------------------
Confidence 799999999 8899999999999999999876543
Q ss_pred hccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 375 ALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
..+.+|..+|++++|+|+| .+|++||.|+..+.|++.+.+
T Consensus 309 ---------------------------------------~~~~~~~~~v~~~~~s~~g-~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 309 ---------------------------------------KTSEQLDQPISACCFNHNG-NIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp ---------------------------------------EECCCCSSCEEEEEECTTS-SCEEEEECCCSTTCGGGCCTT
T ss_pred ---------------------------------------EEecCCCCCceEEEECCCC-CeEEEEecccccccccccCCC
Confidence 4567899999999999999 999999999877777765444
Q ss_pred c
Q psy18073 455 C 455 (639)
Q Consensus 455 ~ 455 (639)
.
T Consensus 349 ~ 349 (368)
T 3mmy_A 349 K 349 (368)
T ss_dssp S
T ss_pred c
Confidence 3
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=4.1e-27 Score=244.65 Aligned_cols=228 Identities=21% Similarity=0.490 Sum_probs=191.3
Q ss_pred cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q psy18073 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~ 248 (639)
..+|...|.+++| ++ .+|++|+.||.|++||+.+++.+..+.+|.+.|.+++| ++++|++|+.||+|++||+.++
T Consensus 129 ~~~~~~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 3467788999988 56 89999999999999999999999999999999999999 7889999999999999999987
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCcee---eeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPI---RAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~---~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
+.... ...+...|.++++++ ..+++++. .|++||+++++.. ..+.+|...|.+++| +++++++|+.
T Consensus 204 ~~~~~----~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~ 274 (435)
T 1p22_A 204 EMLNT----LIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASG 274 (435)
T ss_dssp CEEEE----ECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEET
T ss_pred cEEEE----EcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeC
Confidence 65321 223456899999975 36666663 9999999988765 678899999999999 4579999999
Q ss_pred CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccc
Q psy18073 324 DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATK 403 (639)
Q Consensus 324 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (639)
||+|++||+++++.+
T Consensus 275 dg~i~vwd~~~~~~~----------------------------------------------------------------- 289 (435)
T 1p22_A 275 DRTIKVWNTSTCEFV----------------------------------------------------------------- 289 (435)
T ss_dssp TSEEEEEETTTCCEE-----------------------------------------------------------------
T ss_pred CCeEEEEECCcCcEE-----------------------------------------------------------------
Confidence 999999999876543
Q ss_pred ccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 404 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 404 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
..+.+|...|.+++|+ + .++++|+.||.|++||+++++++.++.+|...|.+++| ++..++.+
T Consensus 290 ----------~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg-- 352 (435)
T 1p22_A 290 ----------RTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG-- 352 (435)
T ss_dssp ----------EEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE--
T ss_pred ----------EEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE--
Confidence 4556899999999994 5 78999999999999999999999999999999999999 55554443
Q ss_pred ccccC-ccccc
Q psy18073 484 FGWES-SDAWQ 493 (639)
Q Consensus 484 ~~~~~-~~~~~ 493 (639)
+.++ .+.|.
T Consensus 353 -~~dg~i~vwd 362 (435)
T 1p22_A 353 -AYDGKIKVWD 362 (435)
T ss_dssp -ETTSCEEEEE
T ss_pred -eCCCcEEEEE
Confidence 3343 37774
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=4.5e-27 Score=236.92 Aligned_cols=263 Identities=10% Similarity=0.074 Sum_probs=193.0
Q ss_pred hcccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEE
Q psy18073 122 RETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 201 (639)
Q Consensus 122 ~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vW 201 (639)
..+...|..+.++++......+..+ .+++|+..+...+.... ...+..+++.+++..++++|+.|++|+||
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~-------~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLK-------SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSS-------EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCC-------EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEE
Confidence 4566778888888877766554433 24689887766554433 23588889998883344678889999999
Q ss_pred eCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCC-CCCcccceEEEecCCeeEEeeecCCCCEEEEc
Q psy18073 202 NLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS-ESDHIVPLHTIISKSVISSISHQRKSKIFATC 280 (639)
Q Consensus 202 d~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 280 (639)
|+.+++++..+. |...|.+++|+++. ++.+ .|+.|++||+.+. +....+.. ....+++++ .+++.+
T Consensus 87 d~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-------~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 87 DDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-------FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-------EEEEEEEET--TEEEEE
T ss_pred ECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-------CCceEEEEc--cEEEEe
Confidence 999999999887 67799999998764 4443 4889999999986 44332221 233445555 555553
Q ss_pred --C--CeeEEEeCCCCc----------------eeeeeecCCccEEEEEEcCCCCcEEEEEeCCCc-EEEEECCCccccC
Q psy18073 281 --G--DQCQLWEHERNE----------------PIRAFSWNVDSLHHVQFNPIDKHILASCASDRS-IILYDTRATVLSR 339 (639)
Q Consensus 281 --~--~~i~vwd~~~~~----------------~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~-i~iwd~~~~~~~~ 339 (639)
+ +.|++||+.+++ .+..+.+|.+.|.+++|+| ++++|++|+.||+ |++||+++++++
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~- 231 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLV- 231 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEE-
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEE-
Confidence 3 389999999875 2788999999999999999 8999999999999 999999876553
Q ss_pred CccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccccc-C
Q psy18073 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLD-G 418 (639)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 418 (639)
..+. |
T Consensus 232 --------------------------------------------------------------------------~~~~~g 237 (355)
T 3vu4_A 232 --------------------------------------------------------------------------REFRRG 237 (355)
T ss_dssp --------------------------------------------------------------------------EEEECT
T ss_pred --------------------------------------------------------------------------EEEEcC
Confidence 3344 5
Q ss_pred -cccceeEEeeCCCCcceEEeccCCceEEEecCCccccce--eee---------------------eeccccccccccCC
Q psy18073 419 -HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ--TYQ---------------------AHDGHVRDTSTRPA 474 (639)
Q Consensus 419 -h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~--~l~---------------------~h~~~v~~v~~spd 474 (639)
|...|++++|+|+| .+|++|+.||+|++||+..+.... .+. .+......++|+||
T Consensus 238 ~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d 316 (355)
T 3vu4_A 238 LDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE 316 (355)
T ss_dssp TCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS
T ss_pred CCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC
Confidence 99999999999999 999999999999999997653211 110 11123467899999
Q ss_pred ccccccccc
Q psy18073 475 VETTDLTRS 483 (639)
Q Consensus 475 g~~~~~~~~ 483 (639)
|+.+++...
T Consensus 317 ~~~l~~~~~ 325 (355)
T 3vu4_A 317 SSLVVVWPH 325 (355)
T ss_dssp SEEEEEETT
T ss_pred CCEEEEEeC
Confidence 988776643
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=7.9e-27 Score=231.56 Aligned_cols=244 Identities=16% Similarity=0.247 Sum_probs=195.9
Q ss_pred ccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeC
Q psy18073 124 TKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203 (639)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~ 203 (639)
+...|..+.+.++.......+.+ ..+++|++.+++++..+.+|...+.++.+.+ ..+++|+.++.+++|+.
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~ 136 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDV 136 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEET
T ss_pred CCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeec
Confidence 34455666666655544433333 3588999999999999999999998877654 68999999999999998
Q ss_pred CCC-ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEE---EE
Q psy18073 204 TSQ-SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIF---AT 279 (639)
Q Consensus 204 ~~~-~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~ 279 (639)
..+ ..+..+.+|...+..+.|++++++|++++.||+|++||+++++...............+.+++++|++..+ ++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 765 56677899999999999999999999999999999999998776554445555566789999999876533 23
Q ss_pred cCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEE--eCCCcEEEEECCCccccCCccccccccccccccc
Q psy18073 280 CGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASC--ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRI 355 (639)
Q Consensus 280 ~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~--s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 355 (639)
++. .|++||.......... .+...+..+.|+| ++..++++ +.||+|++||+++++++
T Consensus 217 ~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~sg~~d~~i~iwd~~~~~~~----------------- 277 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAKV----------------- 277 (318)
T ss_dssp CTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCEE-----------------
T ss_pred cCCCCEEEEEecccccccccc-cceeeeeeeeecc-cccceEEEEEcCCCEEEEEECCCCcEE-----------------
Confidence 332 8999999988766554 4667899999999 56655554 47999999999876543
Q ss_pred cCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcce
Q psy18073 356 PRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLST 435 (639)
Q Consensus 356 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~ 435 (639)
.++.||.+.|++++|+|+| .+
T Consensus 278 ----------------------------------------------------------~~l~gH~~~V~~l~~spdg-~~ 298 (318)
T 4ggc_A 278 ----------------------------------------------------------AELKGHTSRVLSLTMSPDG-AT 298 (318)
T ss_dssp ----------------------------------------------------------EEECCCSSCEEEEEECTTS-SC
T ss_pred ----------------------------------------------------------EEEcCCCCCEEEEEEcCCC-CE
Confidence 5678999999999999999 99
Q ss_pred EEeccCCceEEEecCCccc
Q psy18073 436 IISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 436 l~sgs~Dg~v~iWd~~~~~ 454 (639)
|||||.||+|+|||+.+..
T Consensus 299 l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 299 VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEETTTEEEEECCSCCC
T ss_pred EEEEecCCeEEEEECCCCC
Confidence 9999999999999987653
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=6.4e-27 Score=244.04 Aligned_cols=244 Identities=22% Similarity=0.376 Sum_probs=198.7
Q ss_pred hhhhhhhhhccccccccccccccE-EEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGI-SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V-~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l 231 (639)
...+-|..........+.+|.+.| .++.+ +| ++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+ ++.+
T Consensus 98 ~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~--~g-~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l 172 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVLKGHDDHVITCLQF--CG-NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNII 172 (445)
T ss_dssp HHHHHHHHSCCCCCEEEECSTTSCEEEEEE--ET-TEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEE
T ss_pred hhhhcccCCCcceeEEecccCCCcEEEEEE--cC-CEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEE
Confidence 334556655555667899999875 65555 57 899999999999999999999999999999999999997 6799
Q ss_pred EEEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEE
Q psy18073 232 LSVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHV 308 (639)
Q Consensus 232 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v 308 (639)
++|+.||+|++||+.+++.. ..+ .+...|.++++++ ..+++++ +.|++||+.+++.+..+.+|...|.++
T Consensus 173 ~s~~~dg~i~vwd~~~~~~~-----~~~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 245 (445)
T 2ovr_B 173 ISGSTDRTLKVWNAETGECI-----HTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV 245 (445)
T ss_dssp EEEETTSCEEEEETTTTEEE-----EEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCcCcEE-----EEECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEE
Confidence 99999999999999986543 222 3556899999864 4566665 399999999999999999999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeee
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP 388 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 388 (639)
+| ++.++++|+.||.|++||+++++.+
T Consensus 246 ~~---~~~~l~~~~~dg~i~iwd~~~~~~~-------------------------------------------------- 272 (445)
T 2ovr_B 246 QY---DGRRVVSGAYDFMVKVWDPETETCL-------------------------------------------------- 272 (445)
T ss_dssp EE---CSSCEEEEETTSCEEEEEGGGTEEE--------------------------------------------------
T ss_pred EE---CCCEEEEEcCCCEEEEEECCCCcEe--------------------------------------------------
Confidence 99 4578999999999999998775433
Q ss_pred eecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccc
Q psy18073 389 FVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD 468 (639)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~ 468 (639)
..+.+|...|.+++| ++ .++++|+.||.|++||+++++++.++.+|...+.+
T Consensus 273 -------------------------~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 324 (445)
T 2ovr_B 273 -------------------------HTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 324 (445)
T ss_dssp -------------------------EEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE
T ss_pred -------------------------EEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE
Confidence 455689999999999 66 88999999999999999999999999999999888
Q ss_pred ccccCCcccccccccccccC-cccccc
Q psy18073 469 TSTRPAVETTDLTRSFGWES-SDAWQQ 494 (639)
Q Consensus 469 v~~spdg~~~~~~~~~~~~~-~~~~~~ 494 (639)
+.++++ .++. .+.++ .+.|..
T Consensus 325 ~~~~~~--~l~~---~~~dg~i~vwd~ 346 (445)
T 2ovr_B 325 MELKDN--ILVS---GNADSTVKIWDI 346 (445)
T ss_dssp EEEETT--EEEE---EETTSCEEEEET
T ss_pred EEEeCC--EEEE---EeCCCeEEEEEC
Confidence 877543 3333 23333 367754
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=7e-26 Score=231.89 Aligned_cols=255 Identities=13% Similarity=0.117 Sum_probs=202.2
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~ 232 (639)
+.+++|++.+++.+..+.+|. .+.+++|+|+|..++++++.|+.|++||+.+++.+..+..|. .|.+++|+|++++|+
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~ 89 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVY 89 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEE
T ss_pred CEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEE
Confidence 358899999999999998775 489999999993344788899999999999999999887665 899999999999886
Q ss_pred E-EecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEE-EEcCC--eeEEEeCCCCceeeeeecCCccEEEE
Q psy18073 233 S-VGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIF-ATCGD--QCQLWEHERNEPIRAFSWNVDSLHHV 308 (639)
Q Consensus 233 s-~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v 308 (639)
. ++.|+.|++||+.+++. .........+.+++|+|++..+ ++++. .|++||+.+++.+..+..| ..+.++
T Consensus 90 ~~~~~~~~v~v~d~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~ 163 (391)
T 1l0q_A 90 VTNMASSTLSVIDTTSNTV-----AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGI 163 (391)
T ss_dssp EEETTTTEEEEEETTTTEE-----EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEE
T ss_pred EEECCCCEEEEEECCCCeE-----EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceE
Confidence 5 45679999999997654 3444556688999999999976 55553 9999999999998888876 456999
Q ss_pred EEcCCCCcEE-EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeee
Q psy18073 309 QFNPIDKHIL-ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK 387 (639)
Q Consensus 309 ~~sp~~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 387 (639)
+|+| +++.+ ++++.|+.|++||+++++...
T Consensus 164 ~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~------------------------------------------------ 194 (391)
T 1l0q_A 164 AVTP-DGTKVYVANFDSMSISVIDTVTNSVID------------------------------------------------ 194 (391)
T ss_dssp EECT-TSSEEEEEETTTTEEEEEETTTTEEEE------------------------------------------------
T ss_pred EECC-CCCEEEEEeCCCCEEEEEECCCCeEEE------------------------------------------------
Confidence 9999 66555 788889999999998764321
Q ss_pred eeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEecc---CCceEEEecCCccccceeeeeecc
Q psy18073 388 PFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA---YDGEVKVWNLTSQSCVQTYQAHDG 464 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs---~Dg~v~iWd~~~~~~~~~l~~h~~ 464 (639)
.+ .|...+.+++|+|++ .+|++++ .|+.|++||+.+++.+..+..|.
T Consensus 195 ---------------------------~~-~~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 244 (391)
T 1l0q_A 195 ---------------------------TV-KVEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP- 244 (391)
T ss_dssp ---------------------------EE-ECSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-
T ss_pred ---------------------------EE-ecCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-
Confidence 11 134568899999999 7777777 68999999999999999887765
Q ss_pred ccccccccCCcccccccccccccCccccccC
Q psy18073 465 HVRDTSTRPAVETTDLTRSFGWESSDAWQQH 495 (639)
Q Consensus 465 ~v~~v~~spdg~~~~~~~~~~~~~~~~~~~~ 495 (639)
.+.+++|+|||+.+.++.+. ......|...
T Consensus 245 ~~~~~~~s~dg~~l~~s~~~-d~~v~v~d~~ 274 (391)
T 1l0q_A 245 DPAGIAVTPDGKKVYVALSF-XNTVSVIDTA 274 (391)
T ss_dssp SEEEEEECTTSSEEEEEETT-TTEEEEEETT
T ss_pred CccEEEEccCCCEEEEEcCC-CCEEEEEECC
Confidence 46889999999876444221 1223666543
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=4.1e-26 Score=237.08 Aligned_cols=243 Identities=11% Similarity=0.103 Sum_probs=200.6
Q ss_pred hhhhhhhhcccccc-----ccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCC
Q psy18073 154 ATKLERVFAKPFVA-----NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228 (639)
Q Consensus 154 ~~~~~~~~~~~~~~-----~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~ 228 (639)
.+++|+..+++.+. .+.+|.+.|.+++|+|++ .++++++.|+.|++||+.+++.+..+..|...+.+++|+|++
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIR 223 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTT
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCC
Confidence 48899998888776 667899999999999999 999999999999999999999999999999999999999999
Q ss_pred CEEEE-EecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---------C-eeEEEeCCCCceeee
Q psy18073 229 SQFLS-VGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---------D-QCQLWEHERNEPIRA 297 (639)
Q Consensus 229 ~~l~s-~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~-~i~vwd~~~~~~~~~ 297 (639)
+.+++ ++.|+.|++||+++++. .........+.+++++|++..+++++ + .|++||+.+++.+..
T Consensus 224 ~~l~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 224 DLVYCSNWISEDISVIDRKTKLE-----IRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEE-----EEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred CEEEEEecCCCcEEEEECCCCcE-----EEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 98854 45899999999987654 33344456799999999998888776 2 899999999887766
Q ss_pred eecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcc
Q psy18073 298 FSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALN 377 (639)
Q Consensus 298 ~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 377 (639)
+ .|...+.+++|+|++..++++++.|+.|++||+.+++...
T Consensus 299 ~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~-------------------------------------- 339 (433)
T 3bws_A 299 I-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK-------------------------------------- 339 (433)
T ss_dssp E-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE--------------------------------------
T ss_pred c-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE--------------------------------------
Confidence 5 4566889999999433567888999999999998765431
Q ss_pred ccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccC---------------C
Q psy18073 378 ATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAY---------------D 442 (639)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~---------------D 442 (639)
.+ .+...+.+++|+|+| .++++++. |
T Consensus 340 -------------------------------------~~-~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~d 380 (433)
T 3bws_A 340 -------------------------------------SI-PVFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVL 380 (433)
T ss_dssp -------------------------------------EE-ECSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSC
T ss_pred -------------------------------------Ee-cCCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccc
Confidence 11 144567889999998 76766655 6
Q ss_pred ceEEEecCCccccceeeeeeccccccccccCCccccccc
Q psy18073 443 GEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 443 g~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~ 481 (639)
|.|++||+.+++.+..+.. ...+.+++|+|||+.++++
T Consensus 381 g~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 381 GKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp CEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEE
T ss_pred eEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEE
Confidence 8999999999999998866 4578999999999887654
No 123
>2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=238.72 Aligned_cols=148 Identities=27% Similarity=0.480 Sum_probs=126.0
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCC---------C----------------cchhhhhhccCeEEeeEEEeCCCCC
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTT---------G----------------DQADLINNLYQGKMRDYVKCLECGT 544 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~---------~----------------~~~~~i~~~f~g~~~~~~~C~~c~~ 544 (639)
..+.|+|++||+.+++|.|++.++..... + ...++|.++|+|++.+.++|..|++
T Consensus 94 ~~~~QqDA~Efl~~LLd~L~~~l~~~~~~~~~~~~~~~g~~~~~~a~~~w~~~~~~~~s~i~~~F~G~l~s~~~C~~C~~ 173 (367)
T 2y6e_A 94 SGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 173 (367)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHHTCSCSSCCCCCCCCCCSCCHHHHHHHHHHHHHHHCCSHHHHHHCEEEEEEEECTTTCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhccCCccccccccCCchhHHHHHHHHHHHHhcCCccccccCcEEeeeEEeCCCCC
Confidence 45789999999999999999988643211 0 1246799999999999999999999
Q ss_pred eeeeeecceeeeeecCCCCC-------------CCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCC
Q psy18073 545 EKSREDTFLDIPLPVRPFGS-------------SVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFP 611 (639)
Q Consensus 545 ~s~~~~~f~~l~l~~~~~~~-------------~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p 611 (639)
.+.++|+|++|+|+||.... .....+|++||+.|+++|.|+|+|+|+|++|+++++|+|+++|.++|
T Consensus 174 ~s~~~e~f~~LsL~ip~~~~~~~~~~~~~~~~~~~~~~sL~~~L~~f~~~E~l~~~~~~~C~~C~~~~~a~K~~~i~~lP 253 (367)
T 2y6e_A 174 VSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLP 253 (367)
T ss_dssp EEEEEEEESSEEEECCC-------------------CEEHHHHHHHHTSCEECCC-CCEEETTTTEEECCEEEEEEEECC
T ss_pred EeeeEccCeeEEeeCCCCcCCcceeeeeccccccCCCCCHHHHHHHhcccccCCCCCCccCCCCCCCceEEEEEEEecCC
Confidence 99999999999999986431 12235899999999999999999999999999999999999999999
Q ss_pred ceeeeeeccceecCCcccccccCCeeeC
Q psy18073 612 YLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 612 ~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
+||+||||||.|+. ..+.|+++.|+|
T Consensus 254 ~vL~i~LkRF~~~~--~~~~K~~~~v~f 279 (367)
T 2y6e_A 254 KILVVHLKRFSYNR--YWRDKLDTVVEF 279 (367)
T ss_dssp SEEEEEEECEEECS--SCEEECCCCEEC
T ss_pred cEEEEEEeCeeecC--ccceecCceEEe
Confidence 99999999999964 356899999987
No 124
>1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9
Probab=99.95 E-value=2e-27 Score=243.44 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=88.6
Q ss_pred hhhhhccCeEEeeEEEeCCCCCee--eeeecceeeeeecCCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceee
Q psy18073 523 DLINNLYQGKMRDYVKCLECGTEK--SREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCD 600 (639)
Q Consensus 523 ~~i~~~f~g~~~~~~~C~~c~~~s--~~~~~f~~l~l~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~ 600 (639)
+++.++|+ ++.+.++|..|++.+ .+.|+|++|+|+|++.. .+|++||+.|++ |.++ |+|++|++++.
T Consensus 144 ~~i~~~F~-~~~~~~~C~~C~~~s~s~~~e~f~~Lsl~i~~~~-----~~l~~~L~~~~~-e~i~----~~c~~c~~~~~ 212 (415)
T 1vjv_A 144 KFSEDFRI-QFKTTIKDTANDNDITVKENESDSKLQCHISGTT-----NFMRNGLLEGLN-EKIE----KRSDLTGANSI 212 (415)
T ss_dssp HHHTTTCE-EEEEEEEETTEEEEEEEECCCEESCEEECCCTTC-----CBHHHHHHHHHE-EC-------------CCCC
T ss_pred chHHHHHH-hheEEEEECCCCCCccccccccceeeeecccccc-----chHHHHHHHHhh-hhhh----hcccccCCccc
Confidence 56889999 999999999999986 59999999999998643 379999999998 4454 79999999999
Q ss_pred eeEEEEeccCCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 601 AHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 601 ~~~~~~~~~~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
|+|+++|.+||+||+||||||.|+..+..+.|+++.|.|
T Consensus 213 a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~V~F 251 (415)
T 1vjv_A 213 YSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVF 251 (415)
T ss_dssp EEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBC
T ss_pred EEEEEEcccCCCeeEEEEEEEEEeCCCCcchhhcCccCC
Confidence 999999999999999999999999887888999999987
No 125
>2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A
Probab=99.94 E-value=8.1e-27 Score=236.08 Aligned_cols=144 Identities=26% Similarity=0.545 Sum_probs=127.8
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCC-------------------------CcchhhhhhccCeEEeeEEEeCCCCC
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTT-------------------------GDQADLINNLYQGKMRDYVKCLECGT 544 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~-------------------------~~~~~~i~~~f~g~~~~~~~C~~c~~ 544 (639)
..+.|+|++||+.+++|.|++.+.+.... ....++|.++|+|++++.++|..|++
T Consensus 148 ~~~~QqDA~EFl~~LLd~L~~el~~~~~~~~~~~~~~~~~~~~~~a~~~w~~~~~~~~s~I~~lF~G~l~s~i~C~~C~~ 227 (396)
T 2gfo_A 148 AGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHK 227 (396)
T ss_dssp SSSSCCCHHHHHHHHHHHHHHHHCCCCC---------TTSCHHHHHHHHHHHHHHHCCSHHHHHHCEEEEEEEEETTTCC
T ss_pred cCCCCCChHHHHHHHHHHHHHHHhhhccccccccccccccchhhHHHHHHHHhhhccCCccchhhCcEEEEEEEeCCCCc
Confidence 45789999999999999999988654211 01246799999999999999999999
Q ss_pred eeeeeecceeeeeecCCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceec
Q psy18073 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFD 624 (639)
Q Consensus 545 ~s~~~~~f~~l~l~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~ 624 (639)
.+.++|+|++|+|+||..+ ..+|++||+.|+++|.|+|+|+|+|++|+.+++|+|+++|.+||+||+||||||.|+
T Consensus 228 ~s~~~e~f~~LsL~ip~~~----~~sL~~~L~~f~~~E~l~~~n~~~C~~C~~~~~a~k~~~i~~lP~vLiihLkRF~~~ 303 (396)
T 2gfo_A 228 KSRTFEAFMYLSLPLASTS----KCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYD 303 (396)
T ss_dssp EEEEEEEESSEEECCSCSS----EEEHHHHHHHHTSCEEECSTTCEEETTTTEEECEEEEEEEEECCSEEEEEECCEEEC
T ss_pred eecccccceeeeecccccc----cCCHHHHHHHhCCcccccCCcccccCCcccccceEEEEEEecCCcEEEEEecceecc
Confidence 9999999999999998642 358999999999999999999999999999999999999999999999999999996
Q ss_pred CCcccccccCCeeeC
Q psy18073 625 YSTMHRIKLNDKVEC 639 (639)
Q Consensus 625 ~~~~~~~k~~~~v~f 639 (639)
.. ...|+++.|.|
T Consensus 304 ~~--~~~K~~~~v~f 316 (396)
T 2gfo_A 304 GR--WKQKLQTSVDF 316 (396)
T ss_dssp SS--SEEECCCEEEC
T ss_pred Cc--cceecCceEec
Confidence 43 56899999987
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.3e-25 Score=215.55 Aligned_cols=237 Identities=9% Similarity=0.101 Sum_probs=163.5
Q ss_pred cEEEEEECCCC-Ce-eEEEeeCCCcEEEEeCCCC---ceEEEEeccCC-------------------------ceEEEEE
Q psy18073 175 GISCLAKHPTK-LS-TIISGAYDGEVKVWNLTSQ---SCVQTYQAHDG-------------------------HVRDVCF 224 (639)
Q Consensus 175 ~V~~l~~sp~~-~~-~l~sgs~dg~i~vWd~~~~---~~~~~~~~h~~-------------------------~V~~v~~ 224 (639)
.|.++-|-..| .. .+++++ ...|++|+..++ ++++++.+|.. .|++++|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 36677775544 22 455555 469999999988 88888887775 4566677
Q ss_pred cCC----CCEEEEEec--------------------CCeEEEEeCCC-CCCCcccceEEEecCCeeEEeeecC---CCCE
Q psy18073 225 LPD----GSQFLSVGI--------------------DNTIKTWSSEL-SESDHIVPLHTIISKSVISSISHQR---KSKI 276 (639)
Q Consensus 225 sp~----~~~l~s~s~--------------------Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~ 276 (639)
+|| ++++++++. |+.|++|++.. ++.. .....+...+..++|++ ++.+
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~----~s~~~~~~~v~~l~fs~~~g~~~~ 195 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGK----ENQFLMPPEETILTFAEVQGMQEA 195 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEE----EEEEECCCSSCEEEEEEEETSTTE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCcee----eeeccCCCceeeEEeeccCCCCce
Confidence 778 778887664 77777777744 2221 12223445666777777 7788
Q ss_pred EEEcCC--eeEEEeCCCCceeeeeecCC---ccEEEEEEcCCCCcEE------------EEEeCCCcEEEEECCCccccC
Q psy18073 277 FATCGD--QCQLWEHERNEPIRAFSWNV---DSLHHVQFNPIDKHIL------------ASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 277 l~~~~~--~i~vwd~~~~~~~~~~~~h~---~~v~~v~~sp~~~~~l------------~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
+++++. +|+|||+.+|++++++.+|. ..+.+++|+| ++.++ +||+.|++|++||..+++.+.
T Consensus 196 LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~ 274 (356)
T 2w18_A 196 LLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVG 274 (356)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEE
Confidence 998874 99999999999999998754 3677889999 77765 678899999999998876542
Q ss_pred CccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc
Q psy18073 340 NPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH 419 (639)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 419 (639)
.+.. ..-.||
T Consensus 275 v~~~----------------------------------------------------------------------~~p~Gh 284 (356)
T 2w18_A 275 VMLY----------------------------------------------------------------------CLPPGQ 284 (356)
T ss_dssp EEEE----------------------------------------------------------------------CCCTTC
T ss_pred EEEe----------------------------------------------------------------------eccCCC
Confidence 1000 001356
Q ss_pred ccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccc-cccccCCcccccccccccccCc-cccc
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR-DTSTRPAVETTDLTRSFGWESS-DAWQ 493 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~-~v~~spdg~~~~~~~~~~~~~~-~~~~ 493 (639)
...+.+..++ + .++|+|+.||+|+|||+.+|++++++.+|...+. .++|||||++++.+ ++|.. ++|+
T Consensus 285 ~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG---S~D~TIklWd 354 (356)
T 2w18_A 285 AGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG---QKDGNIFVYH 354 (356)
T ss_dssp CCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE---CTTSCEEEEE
T ss_pred cceeEccccC--C-CEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE---ECCCcEEEec
Confidence 5555444454 6 7999999999999999999999999999988666 48999999876643 45554 7774
No 127
>1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A
Probab=99.93 E-value=4.1e-26 Score=227.58 Aligned_cols=146 Identities=42% Similarity=0.752 Sum_probs=125.3
Q ss_pred cccccCccccccCChHHHHHHHHHHHHHHhcCCCCCCcchhhhhhccCeEEeeEEEeCCCCCeeeeeecceeeeeecCCC
Q psy18073 483 SFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPF 562 (639)
Q Consensus 483 ~~~~~~~~~~~~~d~~e~~~~~~d~l~~~~~~~~~~~~~~~~i~~~f~g~~~~~~~C~~c~~~s~~~~~f~~l~l~~~~~ 562 (639)
.++|.....+.|+|++||+.++++.|++.+++.. ..++|.++|+|++.+.++|..|++.+.+.|+|++|+|+||+.
T Consensus 75 ~~~~~~~~~~~QqDA~EFl~~LLd~L~~~~~~~~----~~s~i~~~F~g~~~~~i~C~~C~~~s~~~e~f~~LsL~i~~~ 150 (353)
T 1nb8_A 75 SFGWETLDSFMQHDVQELCRVLLDNVENKMKGTC----VEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGK 150 (353)
T ss_dssp HHTCCBTTTTTTSCHHHHHHHHHHHHHHHTTTST----TTTHHHHHHCEEEEEEEEESSSCCEEEEEEEESCEEECCTTC
T ss_pred hcCCCCCCcccchhHHHHHHHHHHHHHHHhcCCC----ccchhhhhceeEEEEEEEeccCCCeeceeeeeEEEEEEECCC
Confidence 3456556778899999999999999999886532 356899999999999999999999999999999999999864
Q ss_pred CCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 563 GSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
.+|.+||+.|+++|.|+|+|+|+|++|+ ++.|+|+++|.+||+||+||||||.|+..+....|+++.|.|
T Consensus 151 ------~~l~~~L~~~~~~E~l~~~~~~~C~~c~-~~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~K~~~~v~f 220 (353)
T 1nb8_A 151 ------KNIFESFVDYVAVEQLDGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEF 220 (353)
T ss_dssp ------SBHHHHHHHHTCCEEECTTTCEECGGGC-EECEEEEEEESCCCSEEEEEECCCC--------CCCCCCCBC
T ss_pred ------cchHHHHHHhhCccccCCCccccCCcCc-cEeeEEEEEhhcCCCceEEEEecEEEecccCceEecCcEEEC
Confidence 3799999999999999999999999997 678999999999999999999999998777778899999987
No 128
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=9.8e-26 Score=226.20 Aligned_cols=240 Identities=14% Similarity=0.112 Sum_probs=190.9
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc---cccccccccccEEEEEECCCCCe-eEEEeeCCCcE
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP---FVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEV 198 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~l~~H~~~V~~l~~sp~~~~-~l~sgs~dg~i 198 (639)
.+...|..+.+.++.......+.+ +.+++|++..+. ....+.+|...|++++|+|++ . +|++|+.||.|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i 81 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEI 81 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCeE
Confidence 344556666555554433333222 457889887766 345566899999999999999 8 99999999999
Q ss_pred EEEeC-CCCceEEEEec--cCCceEEEEEcCCCCEEEEEecCCeEEEEeCCC---------CCCCcccc-----------
Q psy18073 199 KVWNL-TSQSCVQTYQA--HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL---------SESDHIVP----------- 255 (639)
Q Consensus 199 ~vWd~-~~~~~~~~~~~--h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~---------~~~~~~~~----------- 255 (639)
++||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ +.....+.
T Consensus 82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 159 (342)
T 1yfq_A 82 LKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN 159 (342)
T ss_dssp EEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC
T ss_pred EEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec
Confidence 99999 77765 67788 999999999999 99999999999999999876 33221110
Q ss_pred ---------------------------eEEEecCCeeEEeeecC-CCCEEEEcCC--eeEEEeCCCC------ceeeeee
Q psy18073 256 ---------------------------LHTIISKSVISSISHQR-KSKIFATCGD--QCQLWEHERN------EPIRAFS 299 (639)
Q Consensus 256 ---------------------------~~~~~~~~~v~~~~~~~-~~~~l~~~~~--~i~vwd~~~~------~~~~~~~ 299 (639)
.....+...+.+++|+| ++.++++++. .+++||++.+ +....+.
T Consensus 160 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 160 SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred CCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 01112344789999999 9999999885 9999999887 7888888
Q ss_pred cCCc---------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCch
Q psy18073 300 WNVD---------SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPR 370 (639)
Q Consensus 300 ~h~~---------~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (639)
+|.. .|.+++|+| ++++|++|+.||.|++||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~-------------------------------- 286 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKI-------------------------------- 286 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEE--------------------------------
T ss_pred cccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHh--------------------------------
Confidence 8865 999999999 8899999999999999999876543
Q ss_pred hhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc-ccceeEEeeCCCCcceEEeccCCce-EEEe
Q psy18073 371 EYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH-KDGISCLAKHPTKLSTIISGAYDGE-VKVW 448 (639)
Q Consensus 371 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~~l~sgs~Dg~-v~iW 448 (639)
..+.+| ...|.+++ |++ .+|++|+.||+ .+.|
T Consensus 287 -------------------------------------------~~~~~~h~~~v~~~~--~~~-~~l~s~s~Dg~~~~~~ 320 (342)
T 1yfq_A 287 -------------------------------------------KNFAKFNEDSVVKIA--CSD-NILCLATSDDTFKTNA 320 (342)
T ss_dssp -------------------------------------------EECCCCSSSEEEEEE--ECS-SEEEEEEECTHHHHCS
T ss_pred -------------------------------------------hhhhcccCCCceEec--CCC-CeEEEEecCCcccccc
Confidence 445677 99999999 999 99999999999 6666
Q ss_pred cC
Q psy18073 449 NL 450 (639)
Q Consensus 449 d~ 450 (639)
..
T Consensus 321 ~~ 322 (342)
T 1yfq_A 321 AI 322 (342)
T ss_dssp SS
T ss_pred cc
Confidence 63
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=5.7e-24 Score=217.67 Aligned_cols=239 Identities=12% Similarity=0.136 Sum_probs=190.6
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeE-EEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l-~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l 231 (639)
+.+++|+..+++.+..+..|. .|.+++|+|++ ++| ++++.|+.|++||+.+++.+..+..| ..+.+++|+|+++.|
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg-~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDG-KQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKL 130 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTS-SEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEE
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCC-CEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEE
Confidence 468899999999988888665 99999999999 555 56667899999999999998888755 468999999999977
Q ss_pred -EEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEE-EEcCC--eeEEEeCCCCceeeeeecCCccEEE
Q psy18073 232 -LSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIF-ATCGD--QCQLWEHERNEPIRAFSWNVDSLHH 307 (639)
Q Consensus 232 -~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~ 307 (639)
++++.|+.|++||+.+++. .........+..++|+|++..+ ++++. .|++||+++++.+..+. +...+.+
T Consensus 131 ~~~~~~~~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~ 204 (391)
T 1l0q_A 131 YVTNNGDKTVSVINTVTKAV-----INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSG 204 (391)
T ss_dssp EEEETTTTEEEEEETTTTEE-----EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEE
T ss_pred EEEeCCCCEEEEEECCCCcE-----EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccc
Confidence 6888899999999987654 3444445677999999999877 45443 89999999998887776 4568899
Q ss_pred EEEcCCCCcEEEEEe---CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccccee
Q psy18073 308 VQFNPIDKHILASCA---SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERV 384 (639)
Q Consensus 308 v~~sp~~~~~l~s~s---~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 384 (639)
++|+| ++++|++++ .|+.|++||+++++.+
T Consensus 205 ~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~---------------------------------------------- 237 (391)
T 1l0q_A 205 IAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKIT---------------------------------------------- 237 (391)
T ss_dssp EEECT-TSSEEEEEEECSSCCEEEEEETTTTEEE----------------------------------------------
T ss_pred eEECC-CCCEEEEEecCcCCCcEEEEECCCCeEE----------------------------------------------
Confidence 99999 777777777 6899999999876443
Q ss_pred eeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceE-EeccCCceEEEecCCccccceeeeeec
Q psy18073 385 FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVWNLTSQSCVQTYQAHD 463 (639)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l-~sgs~Dg~v~iWd~~~~~~~~~l~~h~ 463 (639)
..+..|. .+.+++|+|+| ++| ++++.|+.|++||+.+++.+..+..|.
T Consensus 238 -----------------------------~~~~~~~-~~~~~~~s~dg-~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 238 -----------------------------ARIPVGP-DPAGIAVTPDG-KKVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp -----------------------------EEEECCS-SEEEEEECTTS-SEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred -----------------------------EEEecCC-CccEEEEccCC-CEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 2223333 46889999999 655 788999999999999999999998776
Q ss_pred cccc---cccccCCcccc
Q psy18073 464 GHVR---DTSTRPAVETT 478 (639)
Q Consensus 464 ~~v~---~v~~spdg~~~ 478 (639)
.+.. .+.+.|++...
T Consensus 287 ~~~~~~~~~~~~~~~~~~ 304 (391)
T 1l0q_A 287 NPYASGQFIGSIPVQPVY 304 (391)
T ss_dssp SEECCSSCEEECSSCCCC
T ss_pred CCCccceeeecccccccc
Confidence 5532 35556665443
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.7e-24 Score=222.59 Aligned_cols=234 Identities=13% Similarity=0.122 Sum_probs=188.2
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCC---cEEEEeCCCCceEEEEeccCCceEEEEEcCCCC
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG---EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg---~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~ 229 (639)
..+++||.. +...+.+.+|...|.+++|||+| +.|++++.|+ .|++||+.+++.. .+..|.+.+.+++|+|||+
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 467889886 45577888999999999999999 8999999885 9999999998875 4677889999999999999
Q ss_pred EEE-EEecCCe--EEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-----eeEEEeCCCCceeeeeecC
Q psy18073 230 QFL-SVGIDNT--IKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-----QCQLWEHERNEPIRAFSWN 301 (639)
Q Consensus 230 ~l~-s~s~Dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----~i~vwd~~~~~~~~~~~~h 301 (639)
.|+ +++.|+. |++||+.+++.. ....+...+.+++|+|||..++.+++ .|.+||+.+++. ..+..|
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~-----~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~ 309 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIR-----QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWE 309 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEE-----ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCS
T ss_pred EEEEEEecCCCceEEEEECCCCCEE-----eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecC
Confidence 888 6666654 999999875431 11223467899999999998876652 688889988764 445567
Q ss_pred CccEEEEEEcCCCCcEEEEEeCC---CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccc
Q psy18073 302 VDSLHHVQFNPIDKHILASCASD---RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNA 378 (639)
Q Consensus 302 ~~~v~~v~~sp~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 378 (639)
...+.+++|+| ++++|++++.+ +.|.+||+.+++..
T Consensus 310 ~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~---------------------------------------- 348 (415)
T 2hqs_A 310 GSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ---------------------------------------- 348 (415)
T ss_dssp SSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE----------------------------------------
T ss_pred CCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE----------------------------------------
Confidence 78899999999 78888887764 58999999875431
Q ss_pred cccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCc---eEEEecCCcccc
Q psy18073 379 TKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG---EVKVWNLTSQSC 455 (639)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg---~v~iWd~~~~~~ 455 (639)
.+..|. .+.+++|+|+| ++|++++.|+ .|++||+. +..
T Consensus 349 ------------------------------------~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l~~~d~~-g~~ 389 (415)
T 2hqs_A 349 ------------------------------------VLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVLNLVSTD-GRF 389 (415)
T ss_dssp ------------------------------------ECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEEEEEETT-SCC
T ss_pred ------------------------------------EecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEEEEEECC-CCc
Confidence 123343 78899999999 8888888877 89999986 667
Q ss_pred ceeeeeeccccccccccCCc
Q psy18073 456 VQTYQAHDGHVRDTSTRPAV 475 (639)
Q Consensus 456 ~~~l~~h~~~v~~v~~spdg 475 (639)
...+.+|.+.|.+++|+|--
T Consensus 390 ~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 390 KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEECCCSSSEEEEEEECCCC
T ss_pred EEEeeCCCCCCcCCcccccc
Confidence 78888999999999999974
No 131
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=99.93 E-value=8.1e-26 Score=227.66 Aligned_cols=148 Identities=26% Similarity=0.486 Sum_probs=125.6
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCCC----------------------------------------cchhhhhhcc
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTTG----------------------------------------DQADLINNLY 529 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~~----------------------------------------~~~~~i~~~f 529 (639)
..+.|+|++||+.++++.|++.++...... ...++|.++|
T Consensus 87 ~~~~QqDA~Efl~~LLd~L~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~~F 166 (355)
T 3i3t_A 87 SGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLF 166 (355)
T ss_dssp CSSCCCBHHHHHHHHHHHHHHHHCCC----------------------------CCHHHHHHHHHHHHHHHCCSHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHHHHhhhccCCCcccccCcccCccccccccccCCCCCHHHHHHHHHHHhhhccCCcccccc
Confidence 567899999999999999999886432110 1235699999
Q ss_pred CeEEeeEEEeCCCCCeeeeeecceeeeeecCCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEecc
Q psy18073 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTE 609 (639)
Q Consensus 530 ~g~~~~~~~C~~c~~~s~~~~~f~~l~l~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~ 609 (639)
+|++.+.++|..|++.+.+.|+|++|+|+||..+......+|++||+.|+++|.|+|+|+|+|++|++++.|+|++.|.+
T Consensus 167 ~g~~~~~~~C~~C~~~s~~~e~f~~lsl~i~~~~~~~~~~sl~~~L~~~~~~e~l~~~n~~~C~~C~~~~~a~k~~~i~~ 246 (355)
T 3i3t_A 167 VGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQR 246 (355)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEESSEEECCCC-------CBHHHHHHHHHCCEEECGGGCCCCSSSCCCCCEEEEEEEEE
T ss_pred cEEEEeeEEeCCCCCCceeeccceeecccCCccccccCccCHHHHHHHhCCccccCCCCCeeCCCCCCccceEEEEEccc
Confidence 99999999999999999999999999999997643334458999999999999999999999999999999999999999
Q ss_pred CCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 610 FPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 610 ~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
+|+||+||||||.++ .....|+++.|+|
T Consensus 247 lP~vL~i~lkRF~~~--~~~~~K~~~~v~f 274 (355)
T 3i3t_A 247 FPRILVLHLNRFSAS--RGSIKKSSVGVDF 274 (355)
T ss_dssp CCSEEEEEECCEECC--SSCCEECCCCCBC
T ss_pred CChheEEEhhheecC--CCCceECCcceeC
Confidence 999999999999985 4467899999887
No 132
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=2e-24 Score=224.35 Aligned_cols=233 Identities=10% Similarity=0.081 Sum_probs=189.3
Q ss_pred ccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEE-----EEeccCCceEEEEEcCCCCEEEEEecCC
Q psy18073 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ-----TYQAHDGHVRDVCFLPDGSQFLSVGIDN 238 (639)
Q Consensus 164 ~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~-----~~~~h~~~V~~v~~sp~~~~l~s~s~Dg 238 (639)
+.+..+..+. .+.+++|+|++ .++++++.|+.|++||+.+++.+. .+.+|.+.|.+++|+|+++++++++.|+
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~ 191 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN 191 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT
T ss_pred eEEEEEcCCC-CceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC
Confidence 4455565544 46699999976 889999999999999999998887 3457899999999999999999999999
Q ss_pred eEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecCCCCEEE-EcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCC
Q psy18073 239 TIKTWSSELSESDHIVPLHTI-ISKSVISSISHQRKSKIFA-TCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPID 314 (639)
Q Consensus 239 ~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~ 314 (639)
.|++||+++++.. ... .+...+.+++|+|++..++ +++ +.|++||+++++.+..+..+ ..+.+++|+| +
T Consensus 192 ~v~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~ 264 (433)
T 3bws_A 192 AVHVFDLKTLAYK-----ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-D 264 (433)
T ss_dssp EEEEEETTTCCEE-----EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT-T
T ss_pred EEEEEECCCceEE-----EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC-C
Confidence 9999999876543 222 3456899999999998774 443 39999999999988888765 4589999999 7
Q ss_pred CcEEEEEe--------CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeee
Q psy18073 315 KHILASCA--------SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFA 386 (639)
Q Consensus 315 ~~~l~s~s--------~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 386 (639)
++.+++++ .||.|++||+++++...
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~----------------------------------------------- 297 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLID----------------------------------------------- 297 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-----------------------------------------------
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEe-----------------------------------------------
Confidence 88888887 58899999998764321
Q ss_pred eeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccc
Q psy18073 387 KPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466 (639)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v 466 (639)
..+|...+.+++|+|++..++++++.|+.|++||+.+++.+..+. +...+
T Consensus 298 -----------------------------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~ 347 (433)
T 3bws_A 298 -----------------------------TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKP 347 (433)
T ss_dssp -----------------------------EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSE
T ss_pred -----------------------------eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCC
Confidence 113555788999999994467888999999999999999888884 67789
Q ss_pred ccccccCCcccccccc
Q psy18073 467 RDTSTRPAVETTDLTR 482 (639)
Q Consensus 467 ~~v~~spdg~~~~~~~ 482 (639)
.+++|+|+|+.++++.
T Consensus 348 ~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 348 NTIALSPDGKYLYVSC 363 (433)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred CeEEEcCCCCEEEEEe
Confidence 9999999998776654
No 133
>3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A
Probab=99.92 E-value=3.3e-25 Score=222.54 Aligned_cols=146 Identities=27% Similarity=0.521 Sum_probs=128.1
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCC-------------------------CcchhhhhhccCeEEeeEEEeCCCCC
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTT-------------------------GDQADLINNLYQGKMRDYVKCLECGT 544 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~-------------------------~~~~~~i~~~f~g~~~~~~~C~~c~~ 544 (639)
..+.|+|++||+..+++.|++.+++.... ....+++.++|+|++.+.++|..|++
T Consensus 94 ~~~~QqDa~Efl~~lLd~L~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~i~~~F~g~~~~~~~C~~C~~ 173 (348)
T 3nhe_A 94 VGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGY 173 (348)
T ss_dssp SSSCCBCHHHHHHHHHHHHHHHHCSCSSCCCCCCCCCTTSCHHHHHHHHHHHHHTTCCCHHHHHHCEEEEEEEEETTTCC
T ss_pred CCCCccCHHHHHHHHHHHHHHHHhhcccCCCCCccccccCCchHHHHHHHHHHHhhcCCccccccceEEEEEEEcCCCCC
Confidence 45679999999999999999988643221 11236799999999999999999999
Q ss_pred eeeeeecceeeeeecCCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceec
Q psy18073 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFD 624 (639)
Q Consensus 545 ~s~~~~~f~~l~l~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~ 624 (639)
.+.++|+|++|+|+||.... ...+|++||+.|+++|.|+|+|+|+|++|++++.|.|++.|.++|++|+||||||.++
T Consensus 174 ~s~~~e~f~~LsL~i~~~~~--~~~sl~~~L~~~~~~e~l~~~~~~~C~~C~~~~~~~k~~~i~~lP~vL~i~lkRf~~~ 251 (348)
T 3nhe_A 174 CSTVFDPFWDLSLPIAKRGY--PEVTLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSES 251 (348)
T ss_dssp EEEEEEEESSEEECCCSSCS--SCEEHHHHHHHHHSCEEECGGGCCEETTTTEECCEEEEEEEEECCSEEEEEECCBCCC
T ss_pred EeeeeccceEEeeeCCCccc--CCCCHHHHHHHhcCceEecCCCceECCCCCCcccEEEEEEeecCCceEEEEEEccccc
Confidence 99999999999999987532 2348999999999999999999999999999999999999999999999999999885
Q ss_pred CCcccccccCCeeeC
Q psy18073 625 YSTMHRIKLNDKVEC 639 (639)
Q Consensus 625 ~~~~~~~k~~~~v~f 639 (639)
+....|+++.|.|
T Consensus 252 --~~~~~K~~~~v~f 264 (348)
T 3nhe_A 252 --RIRTSKLTTFVNF 264 (348)
T ss_dssp --SSCCCBCCCCEEC
T ss_pred --CCceeecCcceec
Confidence 4567899999987
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2.1e-24 Score=221.86 Aligned_cols=242 Identities=9% Similarity=0.011 Sum_probs=189.7
Q ss_pred hhhhhhh--hccccc--cccccccccEEEEEECC--------------CCCeeEEEeeCC------CcEEEEeCCCCceE
Q psy18073 154 ATKLERV--FAKPFV--ANLDGHKDGISCLAKHP--------------TKLSTIISGAYD------GEVKVWNLTSQSCV 209 (639)
Q Consensus 154 ~~~~~~~--~~~~~~--~~l~~H~~~V~~l~~sp--------------~~~~~l~sgs~d------g~i~vWd~~~~~~~ 209 (639)
.+++||+ .+++.+ ..+.+|...+..+++++ .+ ..++.++.+ +.|++||+.. ...
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~-~~l~~~s~~~~~~~~~~i~i~d~~g-~~~ 171 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR-TRIAYVVQTNGGQFPYELRVSDYDG-YNQ 171 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT-CEEEEEEECSSSSCCEEEEEEETTS-CSC
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC-CEEEEEEecCCCCccceEEEEcCCC-CCC
Confidence 5899999 888877 55899999999888875 14 456665554 7999999974 556
Q ss_pred EEEeccCCceEEEEEcCCCCEEEEEecCC---eEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEE-EcC--C-
Q psy18073 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDN---TIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFA-TCG--D- 282 (639)
Q Consensus 210 ~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~- 282 (639)
..+.+|...|.+++|+|||++|++++.|+ .|++||+.+++. .....+...+.+++|+|||+.++ +++ +
T Consensus 172 ~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-----~~l~~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 172 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EEEECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-----EEeecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 77888999999999999999999999885 999999997654 22233456899999999999877 443 2
Q ss_pred -eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC-CC--cEEEEECCCccccCCccccccccccccccccCC
Q psy18073 283 -QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS-DR--SIILYDTRATVLSRNPDEYLRETKTSIHRIPRN 358 (639)
Q Consensus 283 -~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~-Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (639)
.|.+||+.+++. ..+..|...+.+++|+| +++.|++++. ++ .|.+||+.+++.
T Consensus 247 ~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~~--------------------- 303 (415)
T 2hqs_A 247 LNLYVMDLASGQI-RQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAP--------------------- 303 (415)
T ss_dssp CEEEEEETTTCCE-EECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCC---------------------
T ss_pred ceEEEEECCCCCE-EeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCCE---------------------
Confidence 699999998876 56778888999999999 7888887776 45 577778766432
Q ss_pred CCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe
Q psy18073 359 IDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS 438 (639)
Q Consensus 359 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s 438 (639)
..+..|...+.+++|+|+| ++|++
T Consensus 304 -------------------------------------------------------~~l~~~~~~~~~~~~spdG-~~l~~ 327 (415)
T 2hqs_A 304 -------------------------------------------------------QRITWEGSQNQDADVSSDG-KFMVM 327 (415)
T ss_dssp -------------------------------------------------------EECCCSSSEEEEEEECTTS-SEEEE
T ss_pred -------------------------------------------------------EEEecCCCcccCeEECCCC-CEEEE
Confidence 1223455678899999999 88888
Q ss_pred ccCC---ceEEEecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 439 GAYD---GEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 439 gs~D---g~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
++.| +.|++||+.+++.. .+..|. .+.+++|+|||+.++++..
T Consensus 328 ~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred EECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 7764 68999999988764 455554 8899999999998776643
No 135
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.92 E-value=5.2e-25 Score=231.30 Aligned_cols=147 Identities=41% Similarity=0.753 Sum_probs=133.0
Q ss_pred ccccccCccccccCChHHHHHHHHHHHHHHhcCCCCCCcchhhhhhccCeEEeeEEEeCCCCCeeeeeecceeeeeecCC
Q psy18073 482 RSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561 (639)
Q Consensus 482 ~~~~~~~~~~~~~~d~~e~~~~~~d~l~~~~~~~~~~~~~~~~i~~~f~g~~~~~~~C~~c~~~s~~~~~f~~l~l~~~~ 561 (639)
..++|.....+.|+|++||++++++.|++.+++.. ..++|.++|+|++++.++|..|++.+.+.|+|++|+|+||+
T Consensus 243 ~~~~~~~~~~~~QqDa~Efl~~LLd~L~~~l~~~~----~~s~i~~lF~G~~~s~i~C~~C~~~s~~~e~f~~LsL~i~~ 318 (522)
T 2f1z_A 243 KSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTC----VEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKG 318 (522)
T ss_dssp HHTCCCTTTSSTTSCHHHHHHHHHHHHHHHHTTST----TTTHHHHHHCEEEEEEECCSSSCCCCCEEEEESCEEECCTT
T ss_pred hhcCCccCCCcccccHHHHHHHHHHHHHhhccCCc----cccchhhheeEEEEEEEEcCCCCceeeeeeeeEEEEEEeCC
Confidence 34567666788999999999999999999987542 35689999999999999999999999999999999999986
Q ss_pred CCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 562 FGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
. .+|++||+.|+++|.|+|+|+|+|++|+ +++|+|+++|.+||+||+||||||.|+..+....|+++.|+|
T Consensus 319 ~------~~l~~~L~~~~~~E~l~~~n~~~C~~c~-~~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~v~f 389 (522)
T 2f1z_A 319 K------KNIFESFVDYVAVEQLDGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEF 389 (522)
T ss_dssp C------CBHHHHHHHHTCEEEECTTSCBCCGGGC-SBCEEEEEEESCCCSEEEEEECCEEECSSSSCEEECCCCCBC
T ss_pred c------ccchHHHHHhhceeecCCcceeecCcCC-ccceEEEEEeecCCceEEEEEEeEEEcccCCcceEcCcEEeC
Confidence 4 3799999999999999999999999997 568999999999999999999999999877778999999987
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.3e-23 Score=205.70 Aligned_cols=247 Identities=9% Similarity=0.063 Sum_probs=185.7
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC-CceEEEEecc-CCceEEEEEcCCCCE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAH-DGHVRDVCFLPDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~-~~~~~~~~~h-~~~V~~v~~sp~~~~ 230 (639)
..+.+|+..+++.. .+..|...|.+++|+|+| ++|++++ ++.|++||+.+ ++......+| ...|.+++|+|++++
T Consensus 22 ~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 22 SSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp EEEEEEETTTTEEE-EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred eeEEEEeCCCCcee-eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 35778888877765 456699999999999999 8888876 78999999999 8877766666 477899999999999
Q ss_pred EEEEe--cCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEE-EcC--CeeEEEeCCC-CceeeeeecCCcc
Q psy18073 231 FLSVG--IDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFA-TCG--DQCQLWEHER-NEPIRAFSWNVDS 304 (639)
Q Consensus 231 l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~~i~vwd~~~-~~~~~~~~~h~~~ 304 (639)
|++++ .++.++||.+...... ...+.....+..++|+|++..++ +++ +.+++|+++. +.....+..|...
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGT----PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCC----CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSC
T ss_pred EEEEEeCCCCcceEEEEECCCCc----eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCc
Confidence 99999 4455566555322211 22333344588899999999877 443 3788888642 3344566778889
Q ss_pred EEEEEEcCCCCcEEEEEe-CCCcEEEEECCC-ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccc
Q psy18073 305 LHHVQFNPIDKHILASCA-SDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLE 382 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s-~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 382 (639)
+.+++|+| +++.|+.++ .|+.+++|++.. +..
T Consensus 175 ~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~--------------------------------------------- 208 (297)
T 2ojh_A 175 NDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSS--------------------------------------------- 208 (297)
T ss_dssp EEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSC---------------------------------------------
T ss_pred cccceECC-CCCEEEEEecCCCCccEEEECCCCCC---------------------------------------------
Confidence 99999999 777666555 699999998752 111
Q ss_pred eeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCC-----------ceEEEecCC
Q psy18073 383 RVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYD-----------GEVKVWNLT 451 (639)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~D-----------g~v~iWd~~ 451 (639)
+..+..|...+.+++|+|+| ++|++++.| +.|.+||+.
T Consensus 209 ------------------------------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 209 ------------------------------VERITDSAYGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp ------------------------------EEECCCCSEEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred ------------------------------cEEEecCCcccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 13345567788999999999 888888766 579999999
Q ss_pred ccccc--eeeeeeccccccccccCCccccccccc
Q psy18073 452 SQSCV--QTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 452 ~~~~~--~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
+++.. ..+.+|...+..++|+|||+.++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 258 GGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp SCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred CCCceeeeccCCCCcccccceECCCCCEEEEEEe
Confidence 88764 445588889999999999988776643
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.6e-22 Score=214.40 Aligned_cols=302 Identities=13% Similarity=0.103 Sum_probs=210.4
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeC--CCCceEEEEeccCCceEEEEEcC----
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL--TSQSCVQTYQAHDGHVRDVCFLP---- 226 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~--~~~~~~~~~~~h~~~V~~v~~sp---- 226 (639)
+.+.+||..+++++.++..+.. +.+++|+|+| ++|++++.|++|++||+ .+++.+.++.. ...+..++|+|
T Consensus 159 ~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~ 235 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGY 235 (543)
T ss_dssp TEEEEEETTTCCEEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTC
T ss_pred CeEEEEECCCceEEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCC
Confidence 4688999999999999983333 8999999999 99999999999999999 88999988884 55689999999
Q ss_pred CCCEEEEEe-cCCeEEEEeCCCCCCCcccceEEE-------ecCCeeEEeeecCCCCEEEEcC---CeeEEEeCCCCcee
Q psy18073 227 DGSQFLSVG-IDNTIKTWSSELSESDHIVPLHTI-------ISKSVISSISHQRKSKIFATCG---DQCQLWEHERNEPI 295 (639)
Q Consensus 227 ~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~~~~~ 295 (639)
||+++++++ .+++|.+||..+.+....++.... .....+..+.++|++..++.+. +.|.+||..+++.+
T Consensus 236 dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l 315 (543)
T 1nir_A 236 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 315 (543)
T ss_dssp TTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC
T ss_pred CCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc
Confidence 999999988 489999999988766543333221 1223788999999876655443 39999999887654
Q ss_pred e--eeecCCccEEEEEEcCCCCcEEE-EEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhh
Q psy18073 296 R--AFSWNVDSLHHVQFNPIDKHILA-SCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREY 372 (639)
Q Consensus 296 ~--~~~~h~~~v~~v~~sp~~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (639)
. .+ .+...+.+++|+| ++++++ ++..+++|.+||+.+++++..+........ ..
T Consensus 316 ~~~~i-~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~----------------g~----- 372 (543)
T 1nir_A 316 TVTSI-GAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP----------------GR----- 372 (543)
T ss_dssp EEEEE-ECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC----------------TT-----
T ss_pred eeEEe-ccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC----------------CC-----
Confidence 4 33 3566788899999 677555 555689999999999887654331100000 00
Q ss_pred hhhccccccceeeeeeeecCccceeeecccc-ccccccccccccccCcccceeEEeeCCCCcceEEecc-------CCce
Q psy18073 373 VRALNATKLERVFAKPFVGPREYVRALNATK-LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA-------YDGE 444 (639)
Q Consensus 373 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs-------~Dg~ 444 (639)
...+.....+.+++..-. +...+..+.... .-.....+.++++.+|.+.+..|+++|+| ++|++++ .+++
T Consensus 373 g~~~~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~ 450 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQS 450 (543)
T ss_dssp CEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTC
T ss_pred CcccCCCCCccEEEeccC-CCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCce
Confidence 000000001122111100 111221111110 00001144568889999999999999999 8999987 3789
Q ss_pred EEEecCCccccc-eee--------eeeccccccccccCCcccccccc
Q psy18073 445 VKVWNLTSQSCV-QTY--------QAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 445 v~iWd~~~~~~~-~~l--------~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
|.|||+.+++.+ ..+ ..+...+..+.|+|||+.+.++.
T Consensus 451 v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 497 (543)
T 1nir_A 451 VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSV 497 (543)
T ss_dssp EEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEe
Confidence 999999999887 443 34567899999999999877654
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=1.7e-21 Score=206.39 Aligned_cols=263 Identities=13% Similarity=0.070 Sum_probs=191.9
Q ss_pred EECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeC--CCCCCCcccceE
Q psy18073 180 AKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS--ELSESDHIVPLH 257 (639)
Q Consensus 180 ~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~--~~~~~~~~~~~~ 257 (639)
+|+|++ .++++++.|++|.+||..+++++.++..+.. +..++|+|||++|++++.|++|++||+ .+++. ..
T Consensus 144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~-----~~ 216 (543)
T 1nir_A 144 DLDLPN-LFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK-----VA 216 (543)
T ss_dssp CCCGGG-EEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE-----EE
T ss_pred ccCCCC-EEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE-----EE
Confidence 388998 8999999999999999999999999984433 899999999999999999999999999 55433 34
Q ss_pred EEecCCeeEEeeecC----CCCEEEEcC---CeeEEEeCCCCceeeeeecC----------Cc-cEEEEEEcCCCCcEEE
Q psy18073 258 TIISKSVISSISHQR----KSKIFATCG---DQCQLWEHERNEPIRAFSWN----------VD-SLHHVQFNPIDKHILA 319 (639)
Q Consensus 258 ~~~~~~~v~~~~~~~----~~~~l~~~~---~~i~vwd~~~~~~~~~~~~h----------~~-~v~~v~~sp~~~~~l~ 319 (639)
.+.....+..++++| +|+++++++ +.|.+||..+++++..+..+ .. .+.++.++|+++.+++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 455566789999999 999998887 39999999999998888652 23 7899999997777888
Q ss_pred EEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeec--Ccccee
Q psy18073 320 SCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG--PREYVR 397 (639)
Q Consensus 320 s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~ 397 (639)
+...+++|.+||+.+.+.+.... +........+.++|++. ..+.+ .+..+.
T Consensus 297 s~~~~g~i~vvd~~~~~~l~~~~---------i~~~~~~~~~~~spdg~------------------~l~va~~~~~~v~ 349 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLTVTS---------IGAAPFLHDGGWDSSHR------------------YFMTAANNSNKVA 349 (543)
T ss_dssp EETTTTEEEEEECTTSSSCEEEE---------EECCSSCCCEEECTTSC------------------EEEEEEGGGTEEE
T ss_pred EECCCCeEEEEEecCCCcceeEE---------eccCcCccCceECCCCC------------------EEEEEecCCCeEE
Confidence 99999999999998765432100 00011122234444443 11111 111111
Q ss_pred eeccccccccccccccccccC----cccceeEEeeCCCCcceEEecc-CCceEEEecCCc-------cccceeeeeeccc
Q psy18073 398 ALNATKLERVFAKPFVANLDG----HKDGISCLAKHPTKLSTIISGA-YDGEVKVWNLTS-------QSCVQTYQAHDGH 465 (639)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~----h~~~v~~v~~sp~~~~~l~sgs-~Dg~v~iWd~~~-------~~~~~~l~~h~~~ 465 (639)
. ++..+++++..+.. |.+....+ ++|++..+++|++ .|++|.+||+.+ +++++++.+|.+.
T Consensus 350 v------~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 350 V------IDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp E------EETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred E------EECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC
Confidence 1 12222333333332 55443333 4787437888876 689999999998 8999999999999
Q ss_pred cccccccCCccccccccc
Q psy18073 466 VRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 466 v~~v~~spdg~~~~~~~~ 483 (639)
+..|+++|||+.+.+...
T Consensus 423 ~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 423 SLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp CCCEECCTTCCEEEECCT
T ss_pred ceEEEcCCCCCcEEEecC
Confidence 999999999998876653
No 139
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=99.89 E-value=3.6e-23 Score=215.70 Aligned_cols=142 Identities=23% Similarity=0.483 Sum_probs=123.7
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCC---------CCCcchhhhhhccCeEEeeEEEeCCCCCeee-eeecceeeeeec
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSK---------TTGDQADLINNLYQGKMRDYVKCLECGTEKS-REDTFLDIPLPV 559 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~---------~~~~~~~~i~~~f~g~~~~~~~C~~c~~~s~-~~~~f~~l~l~~ 559 (639)
..+.|+|++||+.++++.|++.+.... ......++|.++|+|++++.++|..|++.+. +.|+|++|+|+|
T Consensus 236 ~~~~QqDA~EFl~~LLd~L~~~~~~~~~~~~~~~~~~~~~~~s~i~~~F~G~l~~~~~C~~C~~~s~~~~e~f~~LsL~i 315 (476)
T 3mhs_A 236 AGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDI 315 (476)
T ss_dssp SSSSCEEHHHHHHHHHHHHHHHHHHHCCC-------CCCSCCSHHHHHSCEEEEEEEECTTTCCCCEEEEEEESCEEECC
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCcceeecceEEEEEEEECCCCCeeCCcccchhhhccch
Confidence 456899999999999999998764221 1223457899999999999999999999975 589999999999
Q ss_pred CCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 560 RPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
++. .+|++||+.|+++|.|++++ |+|++|++++.|+|+++|.+||+||+||||||.|+.. +...|+++.|.|
T Consensus 316 ~~~------~sl~~~L~~~~~~E~l~~~~-~~C~~C~~~~~a~k~~~i~~lP~vL~i~LkRF~~~~~-~~~~K~~~~V~f 387 (476)
T 3mhs_A 316 KDK------KKLYECLDSFHKKEQLKDFN-YHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLN-GSNRKLDDFIEF 387 (476)
T ss_dssp TTC------CBHHHHHHHHHCCEECSSCC-CEETTTTEECCCEEEEEEEEBCSEEEEEECCEEECTT-SCEEECCCCCBC
T ss_pred hhh------hHHHHHHHHhcChhhccCCC-CcCCccCCcccEEEEEEcccCCcceEEEeeeccccCC-CCeEECCEEEcC
Confidence 864 37999999999999999755 9999999999999999999999999999999999754 457899999987
No 140
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=99.89 E-value=3e-23 Score=226.48 Aligned_cols=139 Identities=22% Similarity=0.325 Sum_probs=124.4
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCCCcchhhhhhccCeEEeeEEEeCCCCCeeeeeecceeeeeecCCCCCC----
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSS---- 565 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~~~~~~~i~~~f~g~~~~~~~C~~c~~~s~~~~~f~~l~l~~~~~~~~---- 565 (639)
..+.|+|++||+.++++.|++.++. .+.+.++|+|++.++++|..|++++.+.++|++|+|+||.....
T Consensus 448 ~~~~QQDA~EFl~~LLd~L~~el~~-------~s~i~~lF~G~l~s~i~C~~C~~vs~t~e~F~~LsL~Ip~~~~~~~~~ 520 (854)
T 3ihp_A 448 STNRQQDAQEFFLHLINMVERNCRS-------SENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEE 520 (854)
T ss_dssp TSSSCCBHHHHHHHHHHHHHHTCTT-------SCCGGGGTCEEEEEEEEETTTTEEEEEEEEESEEEECCCGGGCTTHHH
T ss_pred ccccccCHHHHHHHHHHHHHHHhcc-------cCCchhhcCceEEEEEEecCCCCEeEEeeeceEEEeeCCccccccccc
Confidence 5678999999999999999998854 24689999999999999999999999999999999999963211
Q ss_pred ----------------------CCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeecccee
Q psy18073 566 ----------------------VAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623 (639)
Q Consensus 566 ----------------------~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~ 623 (639)
.+..+|++||+.|+++|.|+| |+|++|++++.|+|+++|.+||+||+||||||.|
T Consensus 521 ~~~~~~~~~~~~~~g~~~~~~~~~~~sL~dcL~~f~~~E~Le~---y~C~~C~~k~~a~K~~~i~~lP~vLiihLkRF~~ 597 (854)
T 3ihp_A 521 LLEYEEKKRQAEEEKMALPELVRAQVPFSSCLEAYGAPEQVDD---FWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTF 597 (854)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCCEECCHHHHHHHHHSCEEEEE---EEETTTTEEEEEEEEEEESSCCSEEEEEECCEEE
T ss_pred hhhhcccccccccccccccccccCCCCHHHHHHHhcCceEeee---eeccccCCcceeeEEEEeeeCCceEEEEeehhee
Confidence 223589999999999999996 9999999999999999999999999999999999
Q ss_pred cCCcccccccCCeeeC
Q psy18073 624 DYSTMHRIKLNDKVEC 639 (639)
Q Consensus 624 ~~~~~~~~k~~~~v~f 639 (639)
+.. ....|+++.|.|
T Consensus 598 d~~-~~~~Ki~~~V~F 612 (854)
T 3ihp_A 598 GLD-WVPKKLDVSIEM 612 (854)
T ss_dssp CGG-GCEEECCEECCC
T ss_pred cCC-CceEECCeEEec
Confidence 765 567899999988
No 141
>2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A
Probab=99.88 E-value=6.2e-23 Score=209.92 Aligned_cols=140 Identities=15% Similarity=0.250 Sum_probs=122.2
Q ss_pred cccccCChHHHHHHHHHHHHHHhcCCCCC---------------CcchhhhhhccCeEEeeEEEeCCCCCee--eeeecc
Q psy18073 490 DAWQQHDIQELCRVLFDALETQFKGSKTT---------------GDQADLINNLYQGKMRDYVKCLECGTEK--SREDTF 552 (639)
Q Consensus 490 ~~~~~~d~~e~~~~~~d~l~~~~~~~~~~---------------~~~~~~i~~~f~g~~~~~~~C~~c~~~s--~~~~~f 552 (639)
..+.|+|++||+.++++.|++.+++.... ....++|.++|+|++.+.++|..|++.+ .++|+|
T Consensus 103 ~~~~QqDA~Efl~~lLd~L~~~~~~~~~~~~~e~~~~~~~~~~~~~~~s~i~~~F~G~l~s~i~C~~C~~~s~s~~~e~f 182 (404)
T 2ayn_A 103 GQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQ 182 (404)
T ss_dssp SCBCCCCHHHHHHHHHHHHHTTSCCCCCC------------------CCHHHHHTCEEEEEEEEESSSCCCCCBCCEEEE
T ss_pred CCccccCHHHHHHHHHHHHHHHhccccCCcccccchhhhhhhhccccCchhhhhccEEEEEEEEecCCCCccCceeeccC
Confidence 36789999999999999999998654311 1234689999999999999999999995 799999
Q ss_pred eeeeeecCCCCCCCCcCCHHHHHHhhcCceeeCCCCeeeccccCceeeeeEEEEeccCCceeeeeeccceecCCcccccc
Q psy18073 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632 (639)
Q Consensus 553 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~rf~~~~~~~~~~k 632 (639)
++|+|+|++.. .+|++||+.|++ |.|+ |+|++|++++.|+|+++|.+||+||+||||||.|+..++.+.|
T Consensus 183 ~~Lsl~i~~~~-----~~l~~~L~~~~~-e~l~----~~c~~c~~~~~~~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~K 252 (404)
T 2ayn_A 183 LQLSCFINQEV-----KYLFTGLKLRLQ-EEIT----KQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAK 252 (404)
T ss_dssp SSEEEECSSSC-----CBHHHHHHHTTE-ECCC----CEETTTTEECCEEEEEEEEECCSSEEEEEECBCCCCSSSSCCB
T ss_pred ceEEeecCCCc-----ccHHHHHHHhcc-ccee----ecchhhCCccceeeeeeHhhCCCceEEEEEEEEEecccCceec
Confidence 99999998643 379999999997 5554 7999999999999999999999999999999999988778899
Q ss_pred cCCeeeC
Q psy18073 633 LNDKVEC 639 (639)
Q Consensus 633 ~~~~v~f 639 (639)
+++.|.|
T Consensus 253 i~~~v~f 259 (404)
T 2ayn_A 253 VLKDVKF 259 (404)
T ss_dssp CCCCCBC
T ss_pred cCceecc
Confidence 9999987
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=9.5e-21 Score=188.88 Aligned_cols=248 Identities=11% Similarity=0.048 Sum_probs=178.6
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEE-EeeCCCcEEEEeCCCCce-EEEEeccCCceEEEEEcCCCCE
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTII-SGAYDGEVKVWNLTSQSC-VQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~-sgs~dg~i~vWd~~~~~~-~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
+.+.+||..+++.+..+..+...+ +++|+|+| ++++ ++..++.|.+||+.+++. ...+..+..+..+++|+|+|++
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYDFV-DTAITSDC-SNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQF 97 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCCEE-EEEECSSS-CEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSE
T ss_pred CeEEEEeCcccceeeeEEccCCcc-eEEEcCCC-CEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCE
Confidence 457889998888888887777777 99999999 6554 555589999999999987 7777777777666999999999
Q ss_pred EEEEecCC---eEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEc-C--Ce-eEEEeCCCCceee----eee
Q psy18073 231 FLSVGIDN---TIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATC-G--DQ-CQLWEHERNEPIR----AFS 299 (639)
Q Consensus 231 l~s~s~Dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~--~~-i~vwd~~~~~~~~----~~~ 299 (639)
++++..++ .|.+||+.+++. ............++|+|+|+.++++ . +. +.+|++.....+. ...
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~-----~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKF-----ISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEE-----EEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEecCCCCcccEEEEECCCCCe-----EEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc
Confidence 99555553 999999987654 3334445667899999999855444 3 36 9999987654331 122
Q ss_pred cCCccEEEEEEcCCCCc-EEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccc
Q psy18073 300 WNVDSLHHVQFNPIDKH-ILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNA 378 (639)
Q Consensus 300 ~h~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 378 (639)
.....+.+++|+| +++ +++++..++.|.+||+.+++....
T Consensus 173 ~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~-------------------------------------- 213 (331)
T 3u4y_A 173 SGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITL-------------------------------------- 213 (331)
T ss_dssp CSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEE--------------------------------------
T ss_pred cCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccce--------------------------------------
Confidence 3345679999999 666 556666789999999987654100
Q ss_pred cccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcc-eEEeccCCceEEEecCCcccc--
Q psy18073 379 TKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSC-- 455 (639)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-~l~sgs~Dg~v~iWd~~~~~~-- 455 (639)
+..+. +...+..++|+|+| + ++++...++.|.+||+.+++.
T Consensus 214 ----------------------------------~~~~~-~~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~~~~~~ 257 (331)
T 3u4y_A 214 ----------------------------------LNAVG-TNNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLSGTLSF 257 (331)
T ss_dssp ----------------------------------EEEEE-CSSCCCCEEECTTS-SEEEEECSSEEEEEEEETTTTEEEE
T ss_pred ----------------------------------eeecc-CCCCCceEEECCCC-CEEEEEEcCCCEEEEEECCCCceee
Confidence 01111 12456789999999 6 445666788999999999877
Q ss_pred ceeeeee----cccc---ccccccCCcccccccc
Q psy18073 456 VQTYQAH----DGHV---RDTSTRPAVETTDLTR 482 (639)
Q Consensus 456 ~~~l~~h----~~~v---~~v~~spdg~~~~~~~ 482 (639)
+..+..+ ..+. ..++|+|||+.+.++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 291 (331)
T 3u4y_A 258 VKSFGHGLLIDPRPLFGANQMALNKTETKLFISA 291 (331)
T ss_dssp EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEE
T ss_pred ecccccccccCCCCcccccceEECCCCCEEEEec
Confidence 4444322 2222 4479999998876553
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=3.2e-21 Score=213.99 Aligned_cols=319 Identities=10% Similarity=0.022 Sum_probs=202.7
Q ss_pred ccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccc---cEEEEEECCCCCeeEEEeeCC---------C
Q psy18073 129 HRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKD---GISCLAKHPTKLSTIISGAYD---------G 196 (639)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~---~V~~l~~sp~~~~~l~sgs~d---------g 196 (639)
..+.+.++..+... +.+ ..+++|+..+++....+.+|.. .|.+++||||| ++|++++.+ +
T Consensus 20 ~~~~~spdg~~~~~-~~d------g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-EQK------GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCBSSSSCBCCC-CSS------SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCS
T ss_pred cccEEcCCCcEEEE-eCC------CCEEEEECCCCcEEEEeccccccccccceEEECCCC-CEEEEEecCccceeeccee
Confidence 34455666553322 222 2688999999988888887775 49999999999 899988764 7
Q ss_pred cEEEEeCCCCceEEEEe---ccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCC----------
Q psy18073 197 EVKVWNLTSQSCVQTYQ---AHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKS---------- 263 (639)
Q Consensus 197 ~i~vWd~~~~~~~~~~~---~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~---------- 263 (639)
.|.+||+.+++. ..+. +|...+..++|||||+.||+++. +.|++||+.+++...... .+..
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~----~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS----TGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC----CCBTTTEEEEECCH
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec----CCCCCceECcccce
Confidence 888999998876 3343 45556899999999999999985 799999998765432111 1111
Q ss_pred --------eeEEeeecCCCCEEEEcCC------------------------------------eeEEEeCCCCceeeeee
Q psy18073 264 --------VISSISHQRKSKIFATCGD------------------------------------QCQLWEHERNEPIRAFS 299 (639)
Q Consensus 264 --------~v~~~~~~~~~~~l~~~~~------------------------------------~i~vwd~~~~~~~~~~~ 299 (639)
.+.+++|+|||+.|+.++. .|.+||+.+++....+.
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~ 245 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM 245 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee
Confidence 2378999999999887641 68899999888666666
Q ss_pred cC------CccEEEEEEcCCCCcEEEEEeC----CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCc
Q psy18073 300 WN------VDSLHHVQFNPIDKHILASCAS----DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGP 369 (639)
Q Consensus 300 ~h------~~~v~~v~~sp~~~~~l~s~s~----Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (639)
.+ ...+..++|+| |+++|++.+. +..|++||+.+++............ +. .....+.|+|++..
T Consensus 246 ~~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~---~~--~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 246 PPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAW---LH--RQNEEPVFSKDGRK 319 (723)
T ss_dssp CCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSC---CC--CCCCCCEECTTSCS
T ss_pred CCccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCE---Ee--ccCCCceEcCCCCe
Confidence 54 67899999999 7888877653 3579999999876543221110000 00 00013456665541
Q ss_pred hhhhhhccccccceeeeeeeecCccceeeeccccccccccccc---cccccCcccceeE-EeeCCCCcceEEec-cCC--
Q psy18073 370 REYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPF---VANLDGHKDGISC-LAKHPTKLSTIISG-AYD-- 442 (639)
Q Consensus 370 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~v~~-v~~sp~~~~~l~sg-s~D-- 442 (639)
+++...............+.+....... ...+..+...+.. ++|+|+| +.|+.. ..|
T Consensus 320 ---------------l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~~ 383 (723)
T 1xfd_A 320 ---------------FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKG-NKIYFLSTEDLP 383 (723)
T ss_dssp ---------------EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTT-TEEEEEESSSCT
T ss_pred ---------------EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCC-CEEEEEEcCCCC
Confidence 1111000000000000011111001111 2344433344444 7999999 777654 444
Q ss_pred ceEEEecCCccc--cceeeee---eccccccccccCCccccccccc
Q psy18073 443 GEVKVWNLTSQS--CVQTYQA---HDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 443 g~v~iWd~~~~~--~~~~l~~---h~~~v~~v~~spdg~~~~~~~~ 483 (639)
+.+++|++.... ....+.. |.+.+..++|||||+.+++..+
T Consensus 384 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 384 RRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred cceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 889999986532 3444543 6677899999999998776543
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=7.3e-21 Score=211.69 Aligned_cols=257 Identities=6% Similarity=-0.069 Sum_probs=171.7
Q ss_pred cccEEEEEECCCCCeeEEEeeC-CC-----cEEEEeCCCCceEEEEeccCC------------------------ceEEE
Q psy18073 173 KDGISCLAKHPTKLSTIISGAY-DG-----EVKVWNLTSQSCVQTYQAHDG------------------------HVRDV 222 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~-dg-----~i~vWd~~~~~~~~~~~~h~~------------------------~V~~v 222 (639)
...|.+++||||| ++|++++. || .|++||+.+++....+..+.. .|.++
T Consensus 36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4579999999999 89999988 88 999999999988777765543 38899
Q ss_pred EEcCCCCEEEEEecCCeEEEEeCCCCC--CCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeee
Q psy18073 223 CFLPDGSQFLSVGIDNTIKTWSSELSE--SDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFS 299 (639)
Q Consensus 223 ~~sp~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~ 299 (639)
+|+|||++|++++. +.|++||+.++. .... ...+...+..++|+|||+.++.+++ .|.+||+.+++......
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~----l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ----LTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCB----CCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEE----cccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 99999999999986 999999999762 2211 1123467899999999999988876 99999999988766555
Q ss_pred cCCcc----------------EEEEEEcCCCCcEEEEEeCCC-cEEEEECCCccccCCccccccccccccccccCCCCCC
Q psy18073 300 WNVDS----------------LHHVQFNPIDKHILASCASDR-SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPS 362 (639)
Q Consensus 300 ~h~~~----------------v~~v~~sp~~~~~l~s~s~Dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (639)
.+... +.+++|+| |++.|++++.|+ .+..|+.....+ ....... ..
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p----------~~~~~~~------~~ 252 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYA----------DRTDVIE------QR 252 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECS----------SCEEEEE------EE
T ss_pred CCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCC----------CcccceE------ee
Confidence 44432 47799999 788888877654 344443100000 0000000 00
Q ss_pred CCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc-ccccccc--cCcccceeEEeeCCCCcceEEec
Q psy18073 363 LHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA-KPFVANL--DGHKDGISCLAKHPTKLSTIISG 439 (639)
Q Consensus 363 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~h~~~v~~v~~sp~~~~~l~sg 439 (639)
+...+.. .....+ +.+.... +...... .+|...+..++| ||| ++|+.+
T Consensus 253 ~~~~g~~---------~~~~~l------------------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~ 303 (741)
T 2ecf_A 253 YPAAGDA---------NVQVKL------------------GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQ 303 (741)
T ss_dssp CCBTTSC---------CCEEEE------------------EEECSSTTCCCEEECCCSCSSEEEEEEEE-EET-TEEEEE
T ss_pred cCCCCCC---------CCeeEE------------------EEEECCCCCceEEecCCCCcceEEEEEEe-CCC-CEEEEE
Confidence 0000000 000000 0000000 1110111 257788999999 999 877754
Q ss_pred c-----CCceEEEecCCccccceeeeeecc----ccccccccCCccccccc
Q psy18073 440 A-----YDGEVKVWNLTSQSCVQTYQAHDG----HVRDTSTRPAVETTDLT 481 (639)
Q Consensus 440 s-----~Dg~v~iWd~~~~~~~~~l~~h~~----~v~~v~~spdg~~~~~~ 481 (639)
+ .++.|++||+.+++....+..+.. .+..++|+|||+.+...
T Consensus 304 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 304 RQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp EEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred EecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 4 478899999999998888877654 45799999999854433
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4e-20 Score=186.04 Aligned_cols=246 Identities=9% Similarity=0.055 Sum_probs=187.3
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCc---------eEEEEE
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH---------VRDVCF 224 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~---------V~~v~~ 224 (639)
.+.+||..+++.+..+.. ...+..++|+|+|..+++++..++.|.+||..+++.+..+..+... +.+++|
T Consensus 70 ~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp EEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred cEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 577888888887777764 3457899999999446666777899999999999998888765432 789999
Q ss_pred cCCCCEEEEEe--cCCeEEEEeCCCCCCCcccceEEEe-cCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeee
Q psy18073 225 LPDGSQFLSVG--IDNTIKTWSSELSESDHIVPLHTII-SKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFS 299 (639)
Q Consensus 225 sp~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~ 299 (639)
+|+++++++++ .++.|.+||+.+++.. .... ....+..++++|++..+++++. .+.+||..+++.+..+.
T Consensus 149 s~dg~~l~~~~~~~~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 149 DDATNTVYISGIGKESVIWVVDGGNIKLK-----TAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp ETTTTEEEEEEESSSCEEEEEETTTTEEE-----EEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEecCCCceEEEEcCCCCceE-----EEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 99999887776 4889999999876542 3333 3345788999999998777764 89999999999888776
Q ss_pred c----CCccEEEEEEcCCCCcEEEEE-eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhh
Q psy18073 300 W----NVDSLHHVQFNPIDKHILASC-ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVR 374 (639)
Q Consensus 300 ~----h~~~v~~v~~sp~~~~~l~s~-s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 374 (639)
. +...+.+++|+| +++.++.+ ..++.|.+||..+++.+..
T Consensus 224 ~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~---------------------------------- 268 (353)
T 3vgz_A 224 LLDDGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAK---------------------------------- 268 (353)
T ss_dssp CCCSSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEE----------------------------------
T ss_pred cCCCCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEE----------------------------------
Confidence 4 556788999999 66655444 4569999999987654321
Q ss_pred hccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccc
Q psy18073 375 ALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS 454 (639)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~ 454 (639)
+..+. ..+++|+|+|..++++...++.|.+||..+++
T Consensus 269 -----------------------------------------~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 269 -----------------------------------------VAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp -----------------------------------------EECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred -----------------------------------------EEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 01111 14689999993356666689999999999999
Q ss_pred cceeeeeeccccccccccCCcccccccccc
Q psy18073 455 CVQTYQAHDGHVRDTSTRPAVETTDLTRSF 484 (639)
Q Consensus 455 ~~~~l~~h~~~v~~v~~spdg~~~~~~~~~ 484 (639)
.+..+..+ ..+..++|+|||+.+.++...
T Consensus 306 ~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 306 VVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 98888654 467899999999877666544
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=3.1e-21 Score=214.13 Aligned_cols=259 Identities=9% Similarity=0.009 Sum_probs=175.7
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCC---ceEEEEEcCCCCEEEEEecC---------CeEEE
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG---HVRDVCFLPDGSQFLSVGID---------NTIKT 242 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~---~V~~v~~sp~~~~l~s~s~D---------g~i~i 242 (639)
.+.+++|+||| +++++ +.||+|++||+.+++....+.+|.. .|.+++|||||++|++++.+ +.|.+
T Consensus 18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 46789999999 77766 7899999999999998888887765 49999999999999999875 78889
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeeecCCccE----------------
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFSWNVDSL---------------- 305 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~~h~~~v---------------- 305 (639)
||+.+++.. .+... ..+...+..++|+|||+.++.+++ .|.+||+.+++.......+...+
T Consensus 96 ~d~~~~~~~-~l~~~-~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDPQ-SLDPP-EVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCCE-ECCCT-TCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCceE-eccCC-ccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 999986541 11100 011234788999999999998886 99999999988777666544433
Q ss_pred --EEEEEcCCCCcEEEEEeCC-CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccc
Q psy18073 306 --HHVQFNPIDKHILASCASD-RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLE 382 (639)
Q Consensus 306 --~~v~~sp~~~~~l~s~s~D-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 382 (639)
.+++|+| |++.|++++.| +.+.+|++........ +....+.+.+.+.. ....
T Consensus 174 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~G~~---------~~~~ 228 (723)
T 1xfd_A 174 THIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIY---------------PTVKPYHYPKAGSE---------NPSI 228 (723)
T ss_dssp SSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSS---------------CCCEEEECCBTTSC---------CCEE
T ss_pred CcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCC---------------CcceeccCCCCCCC---------CCee
Confidence 7899999 88888887765 4678888643211000 00000111111110 0000
Q ss_pred eeeeeeeecCccceeeecccccccccccccccccc------CcccceeEEeeCCCCcceEEecc----CCceEEEecCCc
Q psy18073 383 RVFAKPFVGPREYVRALNATKLERVFAKPFVANLD------GHKDGISCLAKHPTKLSTIISGA----YDGEVKVWNLTS 452 (639)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~v~~sp~~~~~l~sgs----~Dg~v~iWd~~~ 452 (639)
.+ ..+..........+. +|...+..++||||| +++++.+ .+..|++||+.+
T Consensus 229 ~l------------------~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 229 SL------------------HVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp EE------------------EEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTT
T ss_pred EE------------------EEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCC
Confidence 00 001111111112222 246789999999999 8886654 347899999999
Q ss_pred cccceeeeee-ccccc----cccccCCccccccc
Q psy18073 453 QSCVQTYQAH-DGHVR----DTSTRPAVETTDLT 481 (639)
Q Consensus 453 ~~~~~~l~~h-~~~v~----~v~~spdg~~~~~~ 481 (639)
+++...+..+ .+.+. .++|||||+.+++.
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 9887776554 34443 89999999988765
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=4.9e-20 Score=203.80 Aligned_cols=292 Identities=8% Similarity=0.010 Sum_probs=185.0
Q ss_pred hhhhhccccc-ccccccc-----------------ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCc
Q psy18073 157 LERVFAKPFV-ANLDGHK-----------------DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH 218 (639)
Q Consensus 157 ~~~~~~~~~~-~~l~~H~-----------------~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~ 218 (639)
+||..+++.+ ..+..|. ..|.+++||||+ .++++. |+.|++||+.+++... +..+.+.
T Consensus 47 ~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~-~~~~~~--~~~i~~~d~~~~~~~~-l~~~~~~ 122 (706)
T 2z3z_A 47 VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRG-LVVLFT--QGGLVGFDMLARKVTY-LFDTNEE 122 (706)
T ss_dssp EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTT-EEEEEE--TTEEEEEETTTTEEEE-EECCTTC
T ss_pred EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCC-eEEEEE--CCEEEEEECCCCceEE-ccCCccc
Confidence 6777666653 3444443 569999999995 666653 5999999998887654 4457778
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCC-----CCCCcccceEEE----------ecCCeeEEeeecCCCCEEEEcC--
Q psy18073 219 VRDVCFLPDGSQFLSVGIDNTIKTWSSEL-----SESDHIVPLHTI----------ISKSVISSISHQRKSKIFATCG-- 281 (639)
Q Consensus 219 V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~-----~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~-- 281 (639)
+.+++|+|||++|+++ .|+.|++||+.+ ++.......... .....+.+++|+|||+.|++++
T Consensus 123 ~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred ccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 9999999999999995 689999999987 554321111100 0001257899999999998875
Q ss_pred -------------------------------C--eeEEEeCCCCceeeeee--cCCccEEEEEEcCCCCcEEEEEeCCC-
Q psy18073 282 -------------------------------D--QCQLWEHERNEPIRAFS--WNVDSLHHVQFNPIDKHILASCASDR- 325 (639)
Q Consensus 282 -------------------------------~--~i~vwd~~~~~~~~~~~--~h~~~v~~v~~sp~~~~~l~s~s~Dg- 325 (639)
. .|.+||+.+++...... .|...+.+++|+| +++.|++++.|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~ 280 (706)
T 2z3z_A 202 QSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSP-DENILYVAEVNRA 280 (706)
T ss_dssp CTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECT-TSSEEEEEEECTT
T ss_pred CCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEEC-CCCEEEEEEeCCC
Confidence 2 79999999888655442 4677899999999 888888888776
Q ss_pred ----cEEEEECCCccccCCccccccccccccccccCCCCCCCCC--CCCchhhhhhccccccceeeeeeeecCccceeee
Q psy18073 326 ----SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHP--FEGPREYVRALNATKLERVFAKPFVGPREYVRAL 399 (639)
Q Consensus 326 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (639)
.|.+||+.+++....+....... .......+.|+| ++. . .+.+..+...
T Consensus 281 ~~~~~v~~~d~~~g~~~~~~~~~~~~~-----~~~~~~~~~~sp~~dg~---------------~---l~~~~~~g~~-- 335 (706)
T 2z3z_A 281 QNECKVNAYDAETGRFVRTLFVETDKH-----YVEPLHPLTFLPGSNNQ---------------F---IWQSRRDGWN-- 335 (706)
T ss_dssp SCEEEEEEEETTTCCEEEEEEEEECSS-----CCCCCSCCEECTTCSSE---------------E---EEEECTTSSC--
T ss_pred CCeeEEEEEECCCCceeeEEEEccCCC-----eECccCCceeecCCCCE---------------E---EEEEccCCcc--
Confidence 89999999873322211100000 000012234555 332 1 1111111000
Q ss_pred ccccccccccccccccccCcccceeE-EeeCCCCcceEEeccCCc----eEEEecCCccccceeeeeeccccccccccCC
Q psy18073 400 NATKLERVFAKPFVANLDGHKDGISC-LAKHPTKLSTIISGAYDG----EVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~sp~~~~~l~sgs~Dg----~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
..+... ..+..+..+.+|...+.. ++|+|+|..++++++.++ .|..||+.+++ +..+ .|...+.+++||||
T Consensus 336 -~l~~~~-~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l-~~~~~~~~~~~spd 411 (706)
T 2z3z_A 336 -HLYLYD-TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDL-TPESGMHRTQLSPD 411 (706)
T ss_dssp -EEEEEE-TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEES-CCSSSEEEEEECTT
T ss_pred -EEEEEE-CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceec-cCCCceEEEEECCC
Confidence 001111 122233566777777877 799999933445566665 67777877765 4444 36677899999999
Q ss_pred ccccccccc
Q psy18073 475 VETTDLTRS 483 (639)
Q Consensus 475 g~~~~~~~~ 483 (639)
|+.+++..+
T Consensus 412 g~~l~~~~~ 420 (706)
T 2z3z_A 412 GSAIIDIFQ 420 (706)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEec
Confidence 998776644
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=9.7e-20 Score=182.33 Aligned_cols=252 Identities=7% Similarity=0.029 Sum_probs=171.8
Q ss_pred hhhhhhhhh-cc--ccccccccccccEEEEEECCCCCeeEEEeeCC-CcEEEEeCC--CCc--eEEEEeccCCceEEEEE
Q psy18073 153 NATKLERVF-AK--PFVANLDGHKDGISCLAKHPTKLSTIISGAYD-GEVKVWNLT--SQS--CVQTYQAHDGHVRDVCF 224 (639)
Q Consensus 153 ~~~~~~~~~-~~--~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~d-g~i~vWd~~--~~~--~~~~~~~h~~~V~~v~~ 224 (639)
+.+.+|++. ++ +.+..+ .|...+.+++|+|+| ++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIST 91 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEE
T ss_pred CeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEE
Confidence 346777763 22 233333 477889999999999 777777776 999999997 554 344555444 7899999
Q ss_pred cCCCCEEEEEec-CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeCCC-Cceee---
Q psy18073 225 LPDGSQFLSVGI-DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---DQCQLWEHER-NEPIR--- 296 (639)
Q Consensus 225 sp~~~~l~s~s~-Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~-~~~~~--- 296 (639)
+|++++|++++. ++.|.+||+..+.. ............+.+++|+|++..+++++ +.|.+||+.+ ++...
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGLP--VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTEE--EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCcc--ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 999998877665 88999999952211 11133334455788999999998777665 3999999987 55432
Q ss_pred -eeecC-CccEEEEEEcCCCCcEE-EEEeCCCcEEEEECCC--ccccCCccccccccccccccccCCCCCCCCCCCCchh
Q psy18073 297 -AFSWN-VDSLHHVQFNPIDKHIL-ASCASDRSIILYDTRA--TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPRE 371 (639)
Q Consensus 297 -~~~~h-~~~v~~v~~sp~~~~~l-~s~s~Dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (639)
.+..+ ...+.+++|+| +++++ +++..++.|.+||+.. +.... ..
T Consensus 170 ~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~-~~----------------------------- 218 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIEC-VQ----------------------------- 218 (343)
T ss_dssp EEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEE-EE-----------------------------
T ss_pred cccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEE-Ee-----------------------------
Confidence 23332 34788999999 67655 5555899999999853 21100 00
Q ss_pred hhhhccccccceeeeeeeecCccceeeecccccccccccccccccc---CcccceeEEeeCCCCcceE-EeccCCceEEE
Q psy18073 372 YVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLD---GHKDGISCLAKHPTKLSTI-ISGAYDGEVKV 447 (639)
Q Consensus 372 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~sp~~~~~l-~sgs~Dg~v~i 447 (639)
. ...+. +....+.+++|+|+| ++| ++++.|+.|++
T Consensus 219 --------------------------------~--------~~~~~~~~~~~~~~~~i~~s~dg-~~l~v~~~~~~~i~v 257 (343)
T 1ri6_A 219 --------------------------------T--------LDMMPENFSDTRWAADIHITPDG-RHLYACDRTASLITV 257 (343)
T ss_dssp --------------------------------E--------EECSCTTCCSCCCEEEEEECTTS-SEEEEEETTTTEEEE
T ss_pred --------------------------------e--------ccccCccccccCCccceEECCCC-CEEEEEecCCCEEEE
Confidence 0 00000 123456789999999 555 47778999999
Q ss_pred ecCC----ccccceeeeeeccccccccccCCcccccccc
Q psy18073 448 WNLT----SQSCVQTYQAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 448 Wd~~----~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
||+. +.+.+..+..+.. +..++|+|||+.+.++.
T Consensus 258 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 258 FSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEEC
T ss_pred EEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEec
Confidence 9998 3345555554444 89999999998765543
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=1e-20 Score=210.48 Aligned_cols=266 Identities=13% Similarity=0.011 Sum_probs=196.7
Q ss_pred cccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccc--cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC
Q psy18073 128 IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKP--FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 205 (639)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~ 205 (639)
+..+.+.++.....+... ..+.+|++.++. .+..+..|...+.+++||||| ++||.++ ++.|++||+.+
T Consensus 111 v~~~~~SpDg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp SCCCEECTTSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTT
T ss_pred cceeEECCCCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCC
Confidence 444555555554444332 578889988773 456678899999999999999 8888887 46999999998
Q ss_pred CceEEEEeccCCc----------------eEEEEEcCCCCEEEEEecCC-------------------------------
Q psy18073 206 QSCVQTYQAHDGH----------------VRDVCFLPDGSQFLSVGIDN------------------------------- 238 (639)
Q Consensus 206 ~~~~~~~~~h~~~----------------V~~v~~sp~~~~l~s~s~Dg------------------------------- 238 (639)
++.......+... +.+++|+|||++|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 8776655444432 47899999999999998776
Q ss_pred --eEEEEeCCC-CCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-----C--eeEEEeCCCCceeeeeecCCc----c
Q psy18073 239 --TIKTWSSEL-SESDHIVPLHTIISKSVISSISHQRKSKIFATCG-----D--QCQLWEHERNEPIRAFSWNVD----S 304 (639)
Q Consensus 239 --~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~--~i~vwd~~~~~~~~~~~~h~~----~ 304 (639)
.|.+||+.+ ++....... ..+...+..++| |||+.++.+. . .|.+||+.+++....+..+.. .
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCCceEEecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 889999987 654211100 023457899999 9999888653 1 799999999998877776654 4
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEECCC-ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccce
Q psy18073 305 LHHVQFNPIDKHILASCASDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 383 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 383 (639)
+..++|+| +++++++++.||.++||.+.. +. .
T Consensus 339 ~~~~~~sp-dg~~~~~~~~~g~~~l~~~~~~~~-~--------------------------------------------- 371 (741)
T 2ecf_A 339 HNSLRFLD-DGSILWSSERTGFQHLYRIDSKGK-A--------------------------------------------- 371 (741)
T ss_dssp CSCCEECT-TSCEEEEECTTSSCEEEEECSSSC-E---------------------------------------------
T ss_pred CCceEECC-CCeEEEEecCCCccEEEEEcCCCC-e---------------------------------------------
Confidence 56899999 777999999999999997642 11 1
Q ss_pred eeeeeeecCccceeeeccccccccccccccccccCcccceeEE-eeCCCCcceEEeccCCc--eEEEecCCc-cccceee
Q psy18073 384 VFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCL-AKHPTKLSTIISGAYDG--EVKVWNLTS-QSCVQTY 459 (639)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~sp~~~~~l~sgs~Dg--~v~iWd~~~-~~~~~~l 459 (639)
..+.+|...|..+ .|+|+|..++++++.|+ .++||++.. +..+..+
T Consensus 372 ------------------------------~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 372 ------------------------------AALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp ------------------------------EESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred ------------------------------eeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 3345567778777 59999933446666676 899999875 6667777
Q ss_pred eeeccccccccccCCccccccccc
Q psy18073 460 QAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 460 ~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
.. ...+..++|||||+.+++..+
T Consensus 422 ~~-~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 422 SK-APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp CC-SCSEEEEEECTTSSEEEEEEE
T ss_pred cc-CCCceEEEECCCCCEEEEEec
Confidence 55 567789999999998877644
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=1.1e-19 Score=181.38 Aligned_cols=266 Identities=8% Similarity=0.018 Sum_probs=178.2
Q ss_pred hhhhhhhhcccccccccc-ccc-cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec-c----CCceEEEEEcC
Q psy18073 154 ATKLERVFAKPFVANLDG-HKD-GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-H----DGHVRDVCFLP 226 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~-H~~-~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-h----~~~V~~v~~sp 226 (639)
.+.+||..+++.+..+.. +.. .+..++|+|+|..++++++.++.|.+||+.+++.+..+.. + ...+.+++|+|
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 91 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP 91 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC
Confidence 467888888887777763 222 4889999999944556777789999999999998877753 2 22678899999
Q ss_pred CCCEEEEEe------------cCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCce
Q psy18073 227 DGSQFLSVG------------IDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEP 294 (639)
Q Consensus 227 ~~~~l~s~s------------~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~ 294 (639)
+|++|++++ .++.|.+||+.+++. .........+..++++|+++.++++++.|.+||+.+++.
T Consensus 92 dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-----~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~ 166 (337)
T 1pby_B 92 DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-----RKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTL 166 (337)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-----EEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEE
T ss_pred CCCEEEEEecccccccccccccCceEEEEECCCCcE-----EEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcE
Confidence 999998886 579999999987543 233334556788999999998888888999999999998
Q ss_pred eeeeecCC--ccEEEEEEcCCCCcEEEEEe-CCC-----------------------cEEEEECCCccccCCcccccccc
Q psy18073 295 IRAFSWNV--DSLHHVQFNPIDKHILASCA-SDR-----------------------SIILYDTRATVLSRNPDEYLRET 348 (639)
Q Consensus 295 ~~~~~~h~--~~v~~v~~sp~~~~~l~s~s-~Dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~ 348 (639)
+..+..+. .+ +.|+| ++..++.++ .++ .|.+||+.+++.. ..... ..
T Consensus 167 ~~~~~~~~~~~~---~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~--~~ 239 (337)
T 1pby_B 167 VEDKPIQSWEAE---TYAQP-DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR--IM 239 (337)
T ss_dssp EEEECSTTTTTT---TBCCC-BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE--EC
T ss_pred eeeeeccccCCC---ceeCC-CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC--CC
Confidence 87776544 33 37888 555444333 333 4689999988765 22111 00
Q ss_pred ccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEee
Q psy18073 349 KTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAK 428 (639)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 428 (639)
.. ....+.++|++. . .+.+ ...+. .++......+..+.. ...+.+++|
T Consensus 240 ~~------~~~~~~~s~dg~---------------~---l~~~-~~~v~------~~d~~~~~~~~~~~~-~~~~~~~~~ 287 (337)
T 1pby_B 240 DV------FYFSTAVNPAKT---------------R---AFGA-YNVLE------SFDLEKNASIKRVPL-PHSYYSVNV 287 (337)
T ss_dssp SS------CEEEEEECTTSS---------------E---EEEE-ESEEE------EEETTTTEEEEEEEC-SSCCCEEEE
T ss_pred CC------ceeeEEECCCCC---------------E---EEEe-CCeEE------EEECCCCcCcceecC-CCceeeEEE
Confidence 00 001123344333 1 1111 11111 111111222223322 245789999
Q ss_pred CCCCcceEEeccCCceEEEecCCccccceeeeeecc
Q psy18073 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464 (639)
Q Consensus 429 sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~ 464 (639)
+|+| ++|++++.|+.|++||+.+++.+..+..+.+
T Consensus 288 s~dg-~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 288 STDG-STVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp CTTS-CEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CCCC-CEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 9999 8888888899999999999999988866543
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1.3e-19 Score=181.97 Aligned_cols=241 Identities=11% Similarity=0.112 Sum_probs=163.9
Q ss_pred ccccccEEEEEECCCCCeeEEEeeC--CCcEEEEeCCCCc--eEEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEEEe
Q psy18073 170 DGHKDGISCLAKHPTKLSTIISGAY--DGEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPDGSQFLSVG-IDNTIKTWS 244 (639)
Q Consensus 170 ~~H~~~V~~l~~sp~~~~~l~sgs~--dg~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~l~s~s-~Dg~i~iwd 244 (639)
..+...+..++|+|+| ++++++.. ++.|.+||+.+++ .+..+..+...+..++|+|||++|++++ .+++|.+||
T Consensus 36 ~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3466778899999999 64444432 6899999997765 4455556788899999999999998888 789999999
Q ss_pred CCCCCCCcccceEEEec----------CCeeEEeeecCCCCEEEEcCC--eeEEEeCC-CCceee--eeecCC-ccEEEE
Q psy18073 245 SELSESDHIVPLHTIIS----------KSVISSISHQRKSKIFATCGD--QCQLWEHE-RNEPIR--AFSWNV-DSLHHV 308 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~-~~~~~~--~~~~h~-~~v~~v 308 (639)
+........ ...... ...+.+++++|+++++++..+ .|.+||+. +++... .+..+. ..+..+
T Consensus 115 ~~~~g~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 115 IAADGALTL--TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp ECTTSCEEE--EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred eCCCCCeee--cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 974332211 122211 124788999999996666543 89999998 454322 223332 367889
Q ss_pred EEcCCCCc-EEEEEeCCCcEEEEECCC--ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceee
Q psy18073 309 QFNPIDKH-ILASCASDRSIILYDTRA--TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF 385 (639)
Q Consensus 309 ~~sp~~~~-~l~s~s~Dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 385 (639)
+|+| +++ +++++..++.|.+|++.. ++.... . .
T Consensus 193 ~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~-~------~------------------------------------ 228 (347)
T 3hfq_A 193 VFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQL-G------I------------------------------------ 228 (347)
T ss_dssp EECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEE-E------E------------------------------------
T ss_pred EECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEe-e------e------------------------------------
Confidence 9999 677 455566789999999864 221000 0 0
Q ss_pred eeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceE-EeccCCceEEEecCCc-c--ccceeeee
Q psy18073 386 AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVWNLTS-Q--SCVQTYQA 461 (639)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l-~sgs~Dg~v~iWd~~~-~--~~~~~l~~ 461 (639)
. .... ... .....+..++|+|+| ++| +++..++.|.+|++.. | +.+..+..
T Consensus 229 -------------~------~~~~----~~~-~~~~~~~~i~~spdG-~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 229 -------------V------KTIP----ADY-TAHNGAAAIRLSHDG-HFLYVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp -------------E------ESSC----TTC-CSCCEEEEEEECTTS-CEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred -------------e------eecC----CCC-CCCCcceeEEECCCC-CEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 0 0000 000 112457899999999 755 6667799999999973 2 45556666
Q ss_pred eccccccccccCCcccccccc
Q psy18073 462 HDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 462 h~~~v~~v~~spdg~~~~~~~ 482 (639)
+...+..++|+|||+.+.++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEE
T ss_pred CCCCcCeEEECCCCCEEEEEE
Confidence 666789999999998776553
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=1.7e-20 Score=202.41 Aligned_cols=215 Identities=8% Similarity=0.041 Sum_probs=163.4
Q ss_pred cccEEEEEECCCCCeeEEEeeC-CCcEEEEeCCCCceEEEEeccC-CceEEEEEcCCCCEEEEEec---CCeEEEEeCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAY-DGEVKVWNLTSQSCVQTYQAHD-GHVRDVCFLPDGSQFLSVGI---DNTIKTWSSEL 247 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~-dg~i~vWd~~~~~~~~~~~~h~-~~V~~v~~sp~~~~l~s~s~---Dg~i~iwd~~~ 247 (639)
..+|++++|+||| +.||+++. ||+++||++.+++... +..|. ..|.+++|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 5579999999999 88998877 9999999997666544 44454 68999999999 77777775 55566765543
Q ss_pred --CCCCcccceEEEecCCeeEEeeecCCCC--EEEEcCC-eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 248 --SESDHIVPLHTIISKSVISSISHQRKSK--IFATCGD-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 248 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
..... ...........+++|++. .++++.. .+.+||+.+++.......+. .+++|+| ||++|++++
T Consensus 98 ~~~g~~~-----~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~sp-DG~~la~~~ 168 (582)
T 3o4h_A 98 SRPGEEQ-----RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDI-RGDLIAGLG 168 (582)
T ss_dssp TSTTCCE-----ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEE-ETTEEEEEE
T ss_pred cCCCccc-----cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECC-CCCEEEEEE
Confidence 22211 111222333556777664 5555554 66699999887766555443 7899999 899999888
Q ss_pred CC----CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceee
Q psy18073 323 SD----RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRA 398 (639)
Q Consensus 323 ~D----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (639)
.| +.|++||+.+++.
T Consensus 169 ~~~~~~~~i~~~d~~~g~~------------------------------------------------------------- 187 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGL------------------------------------------------------------- 187 (582)
T ss_dssp EEETTEEEEEEEETTTCCC-------------------------------------------------------------
T ss_pred EcCCCCeEEEEEcCCCCCc-------------------------------------------------------------
Confidence 77 7899999877543
Q ss_pred eccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCc--eEEEecCCccccceeeeeecccccccc------
Q psy18073 399 LNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG--EVKVWNLTSQSCVQTYQAHDGHVRDTS------ 470 (639)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg--~v~iWd~~~~~~~~~l~~h~~~v~~v~------ 470 (639)
..+.+|.+.+..++||||| +.|++++.|| .|++||+.+++.. .+.+|...+..++
T Consensus 188 ---------------~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 188 ---------------RVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW 250 (582)
T ss_dssp ---------------EEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE
T ss_pred ---------------eEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc
Confidence 3345677888999999999 8999888888 8999999999887 7788888899999
Q ss_pred --ccCCccc
Q psy18073 471 --TRPAVET 477 (639)
Q Consensus 471 --~spdg~~ 477 (639)
|||||..
T Consensus 251 ~~~spdg~~ 259 (582)
T 3o4h_A 251 LGYLPDGRL 259 (582)
T ss_dssp EEECTTSCE
T ss_pred eeEcCCCcE
Confidence 9999943
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=2.2e-20 Score=192.56 Aligned_cols=200 Identities=11% Similarity=0.082 Sum_probs=152.0
Q ss_pred CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC--------C---cccceEEEecCCe
Q psy18073 196 GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES--------D---HIVPLHTIISKSV 264 (639)
Q Consensus 196 g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~--------~---~~~~~~~~~~~~~ 264 (639)
+.+++|+... . .+...++.+++++++.++++++.|+ +++|+...... . .............
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 5788887532 1 1345688999999999999999888 89987532100 0 0111223444567
Q ss_pred eEEeeecCCCCEEE----EcCC--eeEEEeCCCC--------ce---eeeeecCCccEEEEEEcCCCCcEEEEEeCCCcE
Q psy18073 265 ISSISHQRKSKIFA----TCGD--QCQLWEHERN--------EP---IRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327 (639)
Q Consensus 265 v~~~~~~~~~~~l~----~~~~--~i~vwd~~~~--------~~---~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i 327 (639)
|.+++|+|++.+++ +++. .|++||++++ ++ +..+.+|...|.+++|+|+++.+|++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 6664 9999998765 22 455677999999999999558999999999999
Q ss_pred EEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccc
Q psy18073 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERV 407 (639)
Q Consensus 328 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (639)
++||++++...
T Consensus 175 ~iwD~~~~~~~--------------------------------------------------------------------- 185 (434)
T 2oit_A 175 AVLQVTETVKV--------------------------------------------------------------------- 185 (434)
T ss_dssp EEEEESSSEEE---------------------------------------------------------------------
T ss_pred EEEEcCCCcce---------------------------------------------------------------------
Confidence 99999875321
Q ss_pred ccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeee-------ccccccccccCCcccccc
Q psy18073 408 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-------DGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 408 ~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h-------~~~v~~v~~spdg~~~~~ 480 (639)
....+|...|.+++|+|+| .+|++|+.||+|++||++ ++....+..| ...|.+++|++++..++.
T Consensus 186 ------~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 186 ------CATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ------EEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ------eeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 2234688899999999999 999999999999999998 6666655444 238899999998866543
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=3.9e-20 Score=212.97 Aligned_cols=316 Identities=9% Similarity=0.022 Sum_probs=210.0
Q ss_pred cccCccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccE-------EEEEECCCCCeeEEEeeCC
Q psy18073 123 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGI-------SCLAKHPTKLSTIISGAYD 195 (639)
Q Consensus 123 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V-------~~l~~sp~~~~~l~sgs~d 195 (639)
.+...+....+.++.....+...+..-.....+.+|+..+++ .+.+.+|...+ ..++||||| +++++++.+
T Consensus 50 ~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg-~ll~~~~~~ 127 (1045)
T 1k32_A 50 SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDG-NLIISTDAM 127 (1045)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTC-CEEEEECTT
T ss_pred eCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCC-EEEEEECCc
Confidence 444556666677777766654322000011357788887766 56788999998 999999999 688888754
Q ss_pred ------CcEEEEeCCCCceE-------------------------------------------------EEEeccCCceE
Q psy18073 196 ------GEVKVWNLTSQSCV-------------------------------------------------QTYQAHDGHVR 220 (639)
Q Consensus 196 ------g~i~vWd~~~~~~~-------------------------------------------------~~~~~h~~~V~ 220 (639)
..|.+||+.+++.. ..+.+|.+.+.
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~ 207 (1045)
T 1k32_A 128 QPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVS 207 (1045)
T ss_dssp SSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCE
T ss_pred CCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCccc
Confidence 35788887655422 22346778888
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeee
Q psy18073 221 DVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFS 299 (639)
Q Consensus 221 ~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~ 299 (639)
++.|+++ .++++++.|++++||++...... ...+.....+...+|+|+|..++.+.+ .|.+||+... .+..+.
T Consensus 208 ~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~----~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~-~l~~l~ 281 (1045)
T 1k32_A 208 SPVIVGH-RIYFITDIDGFGQIYSTDLDGKD----LRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTE-KIEKIE 281 (1045)
T ss_dssp EEEEETT-EEEEEECTTSSCEEEEEETTSCS----CEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTC-CEEECC
T ss_pred ceEEeCC-EEEEEEeccCceEEEEEeCCCCc----ceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCce-Eeeeec
Confidence 9999988 67778888999999987642221 222222334566799999998887765 9999999544 333554
Q ss_pred c-----------CCccEEEEEEc-CCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCC
Q psy18073 300 W-----------NVDSLHHVQFN-PIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFE 367 (639)
Q Consensus 300 ~-----------h~~~v~~v~~s-p~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (639)
+ |...+.+++|+ | +++.|++++ ++.|.+|++.++.......... .....+.|+ +
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~s-d- 347 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLR----------IRYVRRGGD-T- 347 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECSCCSC----------EEEEEECSS-S-
T ss_pred cCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEccCCCc----------ceEEeeeEc-C-
Confidence 4 34578999999 9 888888877 8899999988765432100000 000011222 1
Q ss_pred CchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEE
Q psy18073 368 GPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 447 (639)
Q Consensus 368 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~i 447 (639)
+..+. +.+....+.. .+..-... ...+.+|...+..++|+||| ++||+++.|+.|++
T Consensus 348 --------------g~~l~--~~s~~~~l~~-----~~d~~~~~-~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 348 --------------KVAFI--HGTREGDFLG-----IYDYRTGK-AEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMT 404 (1045)
T ss_dssp --------------EEEEE--EEETTEEEEE-----EEETTTCC-EEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEE
T ss_pred --------------CCeEE--EEECCCceEE-----EEECCCCC-ceEecCCccceeeeEECCCC-CEEEEECCCCeEEE
Confidence 11111 1111111110 01111111 23445788899999999999 99999999999999
Q ss_pred ecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 448 WNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 448 Wd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
||+.+++....+.+|.+.+..++|||||+.+++...
T Consensus 405 ~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 405 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp EETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred EECCCCceEEeccCCCCCccceEECCCCCeEEEEec
Confidence 999999988888889999999999999998877654
No 155
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=1.6e-18 Score=172.63 Aligned_cols=224 Identities=8% Similarity=0.033 Sum_probs=164.1
Q ss_pred EEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEec-CCeEEEEeCCCCCCCcccceE
Q psy18073 179 LAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI-DNTIKTWSSELSESDHIVPLH 257 (639)
Q Consensus 179 l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~-Dg~i~iwd~~~~~~~~~~~~~ 257 (639)
..|.+++...+++++.++.|.+||..+++.+..+..+...+ +++|+|+|+++++++. ++.|.+||+.+++.. ..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----~~ 77 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----VV 77 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE----EE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee----EE
Confidence 34666664678899999999999999999988888777777 9999999997776665 899999999976541 22
Q ss_pred EEecCCeeEE-eeecCCCCEEEEcC-C----eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCc-EEEEEeCCCc-EEE
Q psy18073 258 TIISKSVISS-ISHQRKSKIFATCG-D----QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKH-ILASCASDRS-IIL 329 (639)
Q Consensus 258 ~~~~~~~v~~-~~~~~~~~~l~~~~-~----~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~-~l~s~s~Dg~-i~i 329 (639)
.......... ++++|++.+++++. + .|.+||+.+++.+..+..+ ....+++|+| +++ +++++..++. |.+
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISP-NGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECT-TSSCEEEEEETTTTEEEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECC-CCCEEEEEecCCCceEEE
Confidence 2333344444 99999999888655 2 6999999999988887754 4468999999 565 5666666788 999
Q ss_pred EECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccc
Q psy18073 330 YDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFA 409 (639)
Q Consensus 330 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (639)
|++.....+... .
T Consensus 156 ~~~~~~g~~~~~----------------------------------------------------------------~--- 168 (331)
T 3u4y_A 156 FKIDADGVLFDT----------------------------------------------------------------G--- 168 (331)
T ss_dssp EEECTTCCEEEE----------------------------------------------------------------E---
T ss_pred EEECCCCcEeec----------------------------------------------------------------C---
Confidence 998743211000 0
Q ss_pred ccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccc---ceeeeeeccccccccccCCccccccc
Q psy18073 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC---VQTYQAHDGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 410 ~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~---~~~l~~h~~~v~~v~~spdg~~~~~~ 481 (639)
. ..+ .+...+..++|+|+|..+++++..++.|++||+.+++. +..+.. ...+..++|+|||+.+.++
T Consensus 169 ~---~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 169 Q---EFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp E---EEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEE
T ss_pred C---ccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEE
Confidence 0 111 12334688999999933566777899999999999998 777754 4677899999999866544
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=4.7e-20 Score=204.32 Aligned_cols=253 Identities=9% Similarity=0.034 Sum_probs=169.1
Q ss_pred EEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCC---ceEEEEEcCCCCEEEEEec---------CCeEEEEeC
Q psy18073 178 CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG---HVRDVCFLPDGSQFLSVGI---------DNTIKTWSS 245 (639)
Q Consensus 178 ~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~---~V~~v~~sp~~~~l~s~s~---------Dg~i~iwd~ 245 (639)
+++|+|+| .+++++ .|++|++||+.+++....+.+|.. .|.+++|||||++|++++. |+.|++||+
T Consensus 20 ~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSS-EEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 78999999 766665 599999999999998877776654 4899999999999999886 799999999
Q ss_pred CCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeee-ecCCccE-----------------E
Q psy18073 246 ELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAF-SWNVDSL-----------------H 306 (639)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~-~~h~~~v-----------------~ 306 (639)
.+++......+ ...+..++|||||+.++.+.+ .|++||+.+++..+.. .++...| .
T Consensus 98 ~~g~~~~~~~l-----~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 98 SNGEFVRGNEL-----PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTTEECCSSCC-----CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCCccccceec-----CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc
Confidence 98654211111 245788999999999998876 9999999988765433 2333322 4
Q ss_pred EEEEcCCCCcEEEEEeCC-CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceee
Q psy18073 307 HVQFNPIDKHILASCASD-RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF 385 (639)
Q Consensus 307 ~v~~sp~~~~~l~s~s~D-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 385 (639)
+++|+| ||+.|++++.| +.+.+|.+........ ... ..+.+...+.. .....+.
T Consensus 173 ~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~------~~~---------~~~~yp~~g~~---------~~~~~l~ 227 (719)
T 1z68_A 173 ALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQY------PRT---------INIPYPKAGAK---------NPVVRIF 227 (719)
T ss_dssp CEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSS------CEE---------EEEECCBTTSC---------CCEEEEE
T ss_pred cEEECC-CCCEEEEEEECCCCCceEEeeccCCCCC------ccc---------eeecCCCCCCC---------CCeeEEE
Confidence 899999 88899988765 4555654422110000 000 00000000000 0000000
Q ss_pred eeeeecCccceeeeccccccccccccc--------cccccCcccceeEEeeCCCCcceEEeccCC----ceEEEec----
Q psy18073 386 AKPFVGPREYVRALNATKLERVFAKPF--------VANLDGHKDGISCLAKHPTKLSTIISGAYD----GEVKVWN---- 449 (639)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~v~~v~~sp~~~~~l~sgs~D----g~v~iWd---- 449 (639)
.++.-.+.. ...+.+|...+..++|+||+ +++++.... ..|.+||
T Consensus 228 ------------------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 228 ------------------IIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp ------------------EEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSS
T ss_pred ------------------EEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCC
Confidence 000000000 02345788999999999998 888874432 3588999
Q ss_pred CCccccceee----eeeccccc-----cccccCCccccccc
Q psy18073 450 LTSQSCVQTY----QAHDGHVR-----DTSTRPAVETTDLT 481 (639)
Q Consensus 450 ~~~~~~~~~l----~~h~~~v~-----~v~~spdg~~~~~~ 481 (639)
+.++++...+ .+|.+.+. .++|||||+.+++.
T Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred CCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 8888887777 47777777 89999999977664
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=8.2e-19 Score=176.06 Aligned_cols=146 Identities=9% Similarity=0.044 Sum_probs=111.2
Q ss_pred hhhhhhhhhcccccccccccc-ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccC------CceEEEEEc
Q psy18073 153 NATKLERVFAKPFVANLDGHK-DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD------GHVRDVCFL 225 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~-~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~------~~V~~v~~s 225 (639)
+.+.+||..+++.+..+..+. ..+..++|+|+|..+++++..++.|.+||+.+++.+..+..+. ..+.+++|+
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~s 100 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS 100 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEEC
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEEC
Confidence 457789988888887776543 2578999999993355666788999999999999887776332 237899999
Q ss_pred CCCCEEEEEecC------------CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCc
Q psy18073 226 PDGSQFLSVGID------------NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNE 293 (639)
Q Consensus 226 p~~~~l~s~s~D------------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~ 293 (639)
|||++|++++.+ +.|.+||+.+++.... .........+.+++++|+++ +.++++.|.+||..+++
T Consensus 101 pdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~-l~~~~~~i~~~d~~~~~ 177 (349)
T 1jmx_B 101 PDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP--VRTFPMPRQVYLMRAADDGS-LYVAGPDIYKMDVKTGK 177 (349)
T ss_dssp TTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC--SEEEECCSSCCCEEECTTSC-EEEESSSEEEECTTTCC
T ss_pred CCCCEEEEEcccccccccccccCCCeEEEEECCCccccce--eeeccCCCcccceeECCCCc-EEEccCcEEEEeCCCCc
Confidence 999999999876 9999999987443222 23334455688899999999 55556679999999998
Q ss_pred eeeeeecC
Q psy18073 294 PIRAFSWN 301 (639)
Q Consensus 294 ~~~~~~~h 301 (639)
.+..+..+
T Consensus 178 ~~~~~~~~ 185 (349)
T 1jmx_B 178 YTVALPLR 185 (349)
T ss_dssp EEEEECST
T ss_pred eecccccc
Confidence 87766543
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.2e-19 Score=208.79 Aligned_cols=240 Identities=7% Similarity=-0.016 Sum_probs=186.9
Q ss_pred hhhhhhhhc-cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec-----------cCCceEE
Q psy18073 154 ATKLERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-----------HDGHVRD 221 (639)
Q Consensus 154 ~~~~~~~~~-~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-----------h~~~V~~ 221 (639)
..++|.+.. +.....+.+|. .+...+|+|+| +.|+++ .++.|.+||+.... +..+.+ |...|.+
T Consensus 225 ~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG-~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~ 300 (1045)
T 1k32_A 225 FGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDG-RRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFA 300 (1045)
T ss_dssp SCEEEEEETTSCSCEECCCCC-SSCEEEEEESS-SCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGE
T ss_pred ceEEEEEeCCCCcceEecCCC-CcceeeEcCCC-CEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccce
Confidence 456776543 34455666665 46778999999 888887 48999999995443 445554 4457999
Q ss_pred EEEc-CCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCC-eeEEeeecCCCCEEEEcCC--eeE-EEeCCCCceee
Q psy18073 222 VCFL-PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKS-VISSISHQRKSKIFATCGD--QCQ-LWEHERNEPIR 296 (639)
Q Consensus 222 v~~s-p~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~--~i~-vwd~~~~~~~~ 296 (639)
++|+ |||++|++++ ++.|.+|++..+... ....+.. .+..++|+ ++..++.+++ .+. +||+.+++...
T Consensus 301 ~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~ 373 (1045)
T 1k32_A 301 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-----KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK 373 (1045)
T ss_dssp EEEEECGGGCEEEEE-TTEEEEECTTSSBEE-----ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred eeecCCCCCEEEEEE-cCEEEEEcCCCCceE-----EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE
Confidence 9999 9999999988 889999999865421 1112334 78899999 9998888775 677 88988776544
Q ss_pred eeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 297 AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 297 ~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
. .+|...+..++|+| ++++|++++.++.|++||+.+++..
T Consensus 374 l-~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~-------------------------------------- 413 (1045)
T 1k32_A 374 F-EENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPT-------------------------------------- 413 (1045)
T ss_dssp C-CCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE--------------------------------------
T ss_pred e-cCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceE--------------------------------------
Confidence 3 47888999999999 8999999999999999999876532
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCc----------eEE
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG----------EVK 446 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg----------~v~ 446 (639)
..+.+|.+.+.+++||||| ++|++++.++ .|+
T Consensus 414 -------------------------------------~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 414 -------------------------------------VIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp -------------------------------------EEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEE
T ss_pred -------------------------------------EeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEE
Confidence 2234688889999999999 8888877654 999
Q ss_pred EecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 447 VWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 447 iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
+||+.+++ +..+..|...+..++|+|||+.+++...
T Consensus 456 l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 456 VYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred EEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 99999887 6677788888899999999998776543
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=1.6e-18 Score=172.89 Aligned_cols=267 Identities=11% Similarity=0.034 Sum_probs=172.0
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCC--ceEEEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCcccceEEEecCC
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDG--HVRDVCFLPDGSQF-LSVGIDNTIKTWSSELSESDHIVPLHTIISKS 263 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~--~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~ 263 (639)
.+|++++.++.|.+||+.+++.+..+..... .+..++|+|+++.+ ++++.++.|.+||+.+++.. .......
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-----~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL-----GRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE-----EEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE-----eeEEcCC
Confidence 5899999999999999999998888763322 47899999999766 45566899999999876543 2222211
Q ss_pred ------eeEEeeecCCCCEEEEcC--------------CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 264 ------VISSISHQRKSKIFATCG--------------DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 264 ------~v~~~~~~~~~~~l~~~~--------------~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
.+..++++|++..+++++ +.|.+||+.+++.+..+.. ...+.+++|+| ++++|+++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~-- 152 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL-- 152 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--
Confidence 567899999998887773 5999999999988877765 35678899999 77777766
Q ss_pred CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccccee---eeeeeecCccce-e-e
Q psy18073 324 DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERV---FAKPFVGPREYV-R-A 398 (639)
Q Consensus 324 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~-~-~ 398 (639)
++.|.+||+.+++....+..... .....++|++.. +.... .....+ +......+.... . .
T Consensus 153 ~~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~~s~dg~~---l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 153 GRDLHVMDPEAGTLVEDKPIQSW-----------EAETYAQPDVLA---VWNQH-ESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp SSSEEEEETTTTEEEEEECSTTT-----------TTTTBCCCBCCC---CCCCC-TTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred CCeEEEEECCCCcEeeeeecccc-----------CCCceeCCCccE---Eeeec-cCCCceeeeeecccccccccccccc
Confidence 68999999998876533221110 011234444331 00000 000000 000000000000 0 0
Q ss_pred eccccccccccccc-cccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCccc
Q psy18073 399 LNATKLERVFAKPF-VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVET 477 (639)
Q Consensus 399 ~~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~ 477 (639)
......++...... ...+..+...+.+++|+|+| ++++++ |+.|++||+.+++.+..+..+ ..+.+++|+|||+.
T Consensus 218 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 218 RTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCE
T ss_pred ccceEEEeCCCCCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCE
Confidence 00000001111111 12234456678899999999 888877 799999999999988887543 56789999999987
Q ss_pred cccc
Q psy18073 478 TDLT 481 (639)
Q Consensus 478 ~~~~ 481 (639)
+.++
T Consensus 294 l~~~ 297 (337)
T 1pby_B 294 VWLG 297 (337)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 160
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=8.9e-19 Score=171.10 Aligned_cols=211 Identities=10% Similarity=0.118 Sum_probs=156.5
Q ss_pred EEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCC-CCCCcccceEEEecCCeeEEe
Q psy18073 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL-SESDHIVPLHTIISKSVISSI 268 (639)
Q Consensus 190 ~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~ 268 (639)
.+++.|++|++||+.+++... +..|.+.|.+++|+|+|++|++++ ++.|.+||+.+ ++....... .....+.++
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~ 90 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG---FATICNNDH 90 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT---TCCCBCSCC
T ss_pred CCCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc---cccccccce
Confidence 345788999999999887664 556899999999999999999987 88999999987 554321111 112578889
Q ss_pred eecCCCCEEEEcC----CeeEEE--eCCCCceeeeeecCCccEEEEEEcCCCCcEEE-EEeCCCcEEEEECCCccccCCc
Q psy18073 269 SHQRKSKIFATCG----DQCQLW--EHERNEPIRAFSWNVDSLHHVQFNPIDKHILA-SCASDRSIILYDTRATVLSRNP 341 (639)
Q Consensus 269 ~~~~~~~~l~~~~----~~i~vw--d~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~ 341 (639)
+|+|++..+++++ +...|| +..+++ ...+..+ ..+..++|+| +++.|+ +++.|+.++||++......
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~--- 164 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGV--- 164 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCC---
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCc---
Confidence 9999999998887 244554 555544 3444444 3488999999 666655 8889999999986421100
Q ss_pred cccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCccc
Q psy18073 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKD 421 (639)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 421 (639)
...+..|..
T Consensus 165 -----------------------------------------------------------------------~~~~~~~~~ 173 (297)
T 2ojh_A 165 -----------------------------------------------------------------------ETRLTHGEG 173 (297)
T ss_dssp -----------------------------------------------------------------------EEECCCSSS
T ss_pred -----------------------------------------------------------------------ceEcccCCC
Confidence 023345677
Q ss_pred ceeEEeeCCCCcceEEec-cCCceEEEecCC-ccccceeeeeeccccccccccCCccccccccc
Q psy18073 422 GISCLAKHPTKLSTIISG-AYDGEVKVWNLT-SQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 422 ~v~~v~~sp~~~~~l~sg-s~Dg~v~iWd~~-~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
.+.+++|+|+| .+|+.+ +.|+.+++|++. .+..+..+..|...+..++|+|||+.+++...
T Consensus 174 ~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 174 RNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred ccccceECCCC-CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 88999999999 666554 469999999987 56777788888889999999999998777654
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=2.4e-19 Score=184.74 Aligned_cols=158 Identities=11% Similarity=0.122 Sum_probs=123.9
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC----------ceEEE-----EeccCCceEEEEEcCCCCEEE----E
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----------SCVQT-----YQAHDGHVRDVCFLPDGSQFL----S 233 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~----------~~~~~-----~~~h~~~V~~v~~sp~~~~l~----s 233 (639)
...++.+++++++ .++++|+.|| ++||+.... ..+.. ...|.+.|.+++|+|+|++|+ +
T Consensus 36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 4468999999998 8999999888 999875310 01111 123667899999999999999 7
Q ss_pred EecCCeEEEEeCCCC-----CCCccc-ceEEE-ecCCeeEEeeecCC-CCEEEEcCC--eeEEEeCCCCceeeeeecCCc
Q psy18073 234 VGIDNTIKTWSSELS-----ESDHIV-PLHTI-ISKSVISSISHQRK-SKIFATCGD--QCQLWEHERNEPIRAFSWNVD 303 (639)
Q Consensus 234 ~s~Dg~i~iwd~~~~-----~~~~~~-~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~ 303 (639)
|+.|++|+|||+.+. ...... ..... .+...|.+++|+|+ +.++++++. .|++||++++..+....+|..
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~ 193 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV 193 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC
Confidence 889999999998754 110000 01111 24568999999998 788888774 999999999987777788999
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 304 SLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
.|.+++|+| ++++|++|+.||+|++||++
T Consensus 194 ~v~~v~wsp-dg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 194 AVTSVCWSP-KGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEECTT
T ss_pred ceeEEEEcC-CCCEEEEEcCCCcEEEEccC
Confidence 999999999 79999999999999999987
No 162
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2.2e-18 Score=173.26 Aligned_cols=234 Identities=11% Similarity=0.057 Sum_probs=174.1
Q ss_pred ccccEEEEEECCCCCeeEEEeeC-------CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEEE
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAY-------DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL-SVGIDNTIKTW 243 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~-------dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~-s~s~Dg~i~iw 243 (639)
....+..++|+|+| +.+++++. ++.|.+||..+++.+..+.. ...+..++|+|+|++++ +...++.|.+|
T Consensus 39 ~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 39 VGKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred hccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 45578899999999 66666653 56899999999998888864 34578899999999655 55567999999
Q ss_pred eCCCCCCCcccceEEEec-----CCeeEEeeecCCCCEEEEcC---C-eeEEEeCCCCceeeeeecCCccEEEEEEcCCC
Q psy18073 244 SSELSESDHIVPLHTIIS-----KSVISSISHQRKSKIFATCG---D-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPID 314 (639)
Q Consensus 244 d~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~---~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~ 314 (639)
|..+++.....+...... ...+..++++|++..+++++ + .|.+||..+++.+..+..+...+.+++|+| +
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~-d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS-E 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET-T
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC-C
Confidence 999876532222110000 01368899999998766554 2 799999999999888876666788999999 7
Q ss_pred CcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcc
Q psy18073 315 KHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPRE 394 (639)
Q Consensus 315 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 394 (639)
++.+++++.++.|.+||+.+++....+.
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~---------------------------------------------------- 223 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKK---------------------------------------------------- 223 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEE----------------------------------------------------
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEE----------------------------------------------------
Confidence 8888888999999999998875542110
Q ss_pred ceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCC
Q psy18073 395 YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
....++...+.+++|+|+|..++++...++.|.+||+.+++.+..+.... ...++|+||
T Consensus 224 -------------------~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~d 282 (353)
T 3vgz_A 224 -------------------LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPA 282 (353)
T ss_dssp -------------------CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETT
T ss_pred -------------------cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCC
Confidence 00123555678899999993344555566999999999999988886543 367999999
Q ss_pred ccccccc
Q psy18073 475 VETTDLT 481 (639)
Q Consensus 475 g~~~~~~ 481 (639)
|+.+.+.
T Consensus 283 g~~l~v~ 289 (353)
T 3vgz_A 283 RNEAYVT 289 (353)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 9865444
No 163
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=2.3e-18 Score=172.26 Aligned_cols=177 Identities=11% Similarity=0.104 Sum_probs=121.0
Q ss_pred hhhhhhhhh--ccc--cccccccccccEEEEEECCCCCeeEEEe-eCCCcEEEEeCC---CCceEEEEeccCCceEEEEE
Q psy18073 153 NATKLERVF--AKP--FVANLDGHKDGISCLAKHPTKLSTIISG-AYDGEVKVWNLT---SQSCVQTYQAHDGHVRDVCF 224 (639)
Q Consensus 153 ~~~~~~~~~--~~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sg-s~dg~i~vWd~~---~~~~~~~~~~h~~~V~~v~~ 224 (639)
..+.+|++. ++. .+..+..+. .+.+++|+|+| ++|+++ ..++.|.+||+. +++.+..+..+ ..+.+++|
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ 136 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANI 136 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEE
T ss_pred CeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEE
Confidence 467788876 333 344555444 78999999999 666555 458999999994 34455555544 45889999
Q ss_pred cCCCCEEEEEe-cCCeEEEEeCCCCCCCcccc--eEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeCCC--Cce--
Q psy18073 225 LPDGSQFLSVG-IDNTIKTWSSELSESDHIVP--LHTIISKSVISSISHQRKSKIFATCG---DQCQLWEHER--NEP-- 294 (639)
Q Consensus 225 sp~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~--~~~-- 294 (639)
+|+++++++++ .|+.|.+||+.+........ .........+..++|+|++.++++++ +.+.+||++. ++.
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~ 216 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC 216 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE
T ss_pred CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 99999888887 89999999998623221111 11112234788899999999665443 3899999954 432
Q ss_pred eeeee----cC--CccEEEEEEcCCCCcEEE-EEeCCCcEEEEECC
Q psy18073 295 IRAFS----WN--VDSLHHVQFNPIDKHILA-SCASDRSIILYDTR 333 (639)
Q Consensus 295 ~~~~~----~h--~~~v~~v~~sp~~~~~l~-s~s~Dg~i~iwd~~ 333 (639)
...+. ++ ...+.+++|+| ++++|+ ++..|+.|.+||+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 217 VQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEEC
T ss_pred EeeccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEc
Confidence 22222 11 23577899999 665555 66689999999986
No 164
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.78 E-value=9.2e-18 Score=168.40 Aligned_cols=230 Identities=10% Similarity=0.071 Sum_probs=154.2
Q ss_pred hhhhhhhhhccc--cccccccccccEEEEEECCCCCeeEEEee-CCCcEEEEeCC-CCc--eEEEEec---------cCC
Q psy18073 153 NATKLERVFAKP--FVANLDGHKDGISCLAKHPTKLSTIISGA-YDGEVKVWNLT-SQS--CVQTYQA---------HDG 217 (639)
Q Consensus 153 ~~~~~~~~~~~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sgs-~dg~i~vWd~~-~~~--~~~~~~~---------h~~ 217 (639)
+.+.+|++.++. .+..+..|...+..++|+|+| ++|++++ .++.|.+||+. ++. .+..+.. +..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSC
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCC
Confidence 357788886554 445556678889999999999 7777776 78999999995 333 3333321 123
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeCCC--C
Q psy18073 218 HVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---DQCQLWEHER--N 292 (639)
Q Consensus 218 ~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~--~ 292 (639)
.+.+++|+|+|+++++...++.|.+||+...................+..++|+|||+++++++ +.+.+|+++. +
T Consensus 142 ~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred CceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 4889999999996667777899999999832222111111122233677899999999665543 3899999874 4
Q ss_pred ce--eeeeecCC------ccEEEEEEcCCCCcEE-EEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCC
Q psy18073 293 EP--IRAFSWNV------DSLHHVQFNPIDKHIL-ASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSL 363 (639)
Q Consensus 293 ~~--~~~~~~h~------~~v~~v~~sp~~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (639)
+. +..+.... ..+..++|+| ++++| +++..++.|.+||+.......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~------------------------ 276 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLT------------------------ 276 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEE------------------------
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEE------------------------
Confidence 42 22333222 4588999999 77755 666679999999986321000
Q ss_pred CCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccC-C
Q psy18073 364 HPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAY-D 442 (639)
Q Consensus 364 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~-D 442 (639)
.+..+..+...+.+++|+|+| ++|++++. +
T Consensus 277 ------------------------------------------------~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~ 307 (347)
T 3hfq_A 277 ------------------------------------------------LIQQISTEGDFPRDFDLDPTE-AFVVVVNQNT 307 (347)
T ss_dssp ------------------------------------------------EEEEEECSSSCCCEEEECTTS-SEEEEEETTT
T ss_pred ------------------------------------------------EeEEEecCCCCcCeEEECCCC-CEEEEEEcCC
Confidence 012233455567899999999 77766654 5
Q ss_pred ceEEEe--cCCccccce
Q psy18073 443 GEVKVW--NLTSQSCVQ 457 (639)
Q Consensus 443 g~v~iW--d~~~~~~~~ 457 (639)
+.|.+| |..+|+...
T Consensus 308 ~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 308 DNATLYARDLTSGKLSL 324 (347)
T ss_dssp TEEEEEEECTTTCCEEE
T ss_pred CcEEEEEEeCCCCeEEe
Confidence 899999 556666543
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=4e-17 Score=164.75 Aligned_cols=235 Identities=11% Similarity=0.050 Sum_probs=158.9
Q ss_pred ccccEEEEEECCCCCeeEEEeeCC----CcEEEEeCCC--Cc--eEEEEeccCCceEEEEEcCCCCEEEEEe-cCCeEEE
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYD----GEVKVWNLTS--QS--CVQTYQAHDGHVRDVCFLPDGSQFLSVG-IDNTIKT 242 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~d----g~i~vWd~~~--~~--~~~~~~~h~~~V~~v~~sp~~~~l~s~s-~Dg~i~i 242 (639)
|...+..++|+|+| ++|++++.+ +.|.+|++.. ++ .+.....+......+++ ++++|++++ .+++|.+
T Consensus 48 ~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 67788899999999 888888875 8999998865 43 33344445667788888 888877776 6889999
Q ss_pred EeCCCCCCCcccceEEE-ec---------CCeeEEeeecCCCCEEEEcC---CeeEEEeCCCCce------e-------e
Q psy18073 243 WSSELSESDHIVPLHTI-IS---------KSVISSISHQRKSKIFATCG---DQCQLWEHERNEP------I-------R 296 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~-~~---------~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~~~~------~-------~ 296 (639)
|++.............. .. ...+.+++++|+++.+++++ +.|.+|++..... + .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 99986544322211111 11 12357899999999665543 3899998875442 1 1
Q ss_pred eeecCCccEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 297 AFSWNVDSLHHVQFNPIDKHILASCA-SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 297 ~~~~h~~~v~~v~~sp~~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
....+...+..++|+| +++++++++ .++.|.+||+.++......
T Consensus 205 ~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~---------------------------------- 249 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQ---------------------------------- 249 (361)
T ss_dssp EECCTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEE----------------------------------
T ss_pred eecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeE----------------------------------
Confidence 1223345678999999 777766666 6899999998755321000
Q ss_pred ccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe-ccC-CceEEEecCC--
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS-GAY-DGEVKVWNLT-- 451 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s-gs~-Dg~v~iWd~~-- 451 (639)
.+.....+...+.+++|+|+| ++|+. ... ++.|.+|++.
T Consensus 250 ------------------------------------~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 250 ------------------------------------TVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp ------------------------------------EEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEEEEECTT
T ss_pred ------------------------------------EEecCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEEEEEcCC
Confidence 001122344456899999999 77655 444 5899999986
Q ss_pred ccc--cceeeeeeccccccccccCCcccccccc
Q psy18073 452 SQS--CVQTYQAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 452 ~~~--~~~~l~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
+++ .+..+.. ...+..++|+|||+.+.++.
T Consensus 293 ~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 293 NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred CCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 444 3444444 45788999999998776554
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=4.9e-18 Score=188.15 Aligned_cols=275 Identities=8% Similarity=0.008 Sum_probs=173.8
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCc-----eEEEEEcCCCC
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH-----VRDVCFLPDGS 229 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~-----V~~v~~sp~~~ 229 (639)
+.+.++..+. +. ....+++|+||| .+++++ ||+|++||+.++++...+.+|... ...++|||||+
T Consensus 5 ~tl~~~~~~~----~~---~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~ 74 (740)
T 4a5s_A 5 YTLTDYLKNT----YR---LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ 74 (740)
T ss_dssp CCHHHHHHTC----SC---CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS
T ss_pred eeHHHHhcCc----cc---ccccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC
Confidence 3455665542 22 235689999999 899886 999999999999988888877643 24478999999
Q ss_pred EEEEEecC---------CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeee-e
Q psy18073 230 QFLSVGID---------NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRA-F 298 (639)
Q Consensus 230 ~l~s~s~D---------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~-~ 298 (639)
+|+.++.+ +.+.+||+.+++.... ..+...+...+|||||+.+|.+.+ .|.+||+.+++..+. .
T Consensus 75 ~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-----~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 75 FILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-----ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-----SCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCS
T ss_pred EEEEEECCeeeEEEccceEEEEEECCCCcEEEc-----ccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcC
Confidence 99999887 5567999998754321 113457889999999999998876 999999988875542 2
Q ss_pred ecCCccE-----------------EEEEEcCCCCcEEEEEeCCCc-EEEEECCCccccCCccccccccccccccccCCCC
Q psy18073 299 SWNVDSL-----------------HHVQFNPIDKHILASCASDRS-IILYDTRATVLSRNPDEYLRETKTSIHRIPRNID 360 (639)
Q Consensus 299 ~~h~~~v-----------------~~v~~sp~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (639)
.++...+ .++.||| ||+.||.++.|.+ +.+|++........ .. +....
T Consensus 150 ~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~-------~~------~~~~~ 215 (740)
T 4a5s_A 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESL-------QY------PKTVR 215 (740)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTC-------SS------CEEEE
T ss_pred CCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCC-------CC------Cccee
Confidence 2333322 3489999 8888888876655 89998743221100 00 00000
Q ss_pred CCCCCCCCchhhhhhccccccceeeeeeeec---Ccc-ceeeeccccccccccccccccccCcccceeEEeeCCCCcceE
Q psy18073 361 PSLHPFEGPREYVRALNATKLERVFAKPFVG---PRE-YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI 436 (639)
Q Consensus 361 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l 436 (639)
+.+...+.. .....+......+ +.. .. .... .-..+.+|...+..++|+||| +++
T Consensus 216 ~~yp~~G~~---------~~~~~l~v~d~~~~~~~~~~~~---------~~l~--~~~~~~~~~~~~~~~~wspdg-~~~ 274 (740)
T 4a5s_A 216 VPYPKAGAV---------NPTVKFFVVNTDSLSSVTNATS---------IQIT--APASMLIGDHYLCDVTWATQE-RIS 274 (740)
T ss_dssp EECCBTTSC---------CCEEEEEEEETTSCCSSSCCCE---------EEEC--CCHHHHTSCEEEEEEEEEETT-EEE
T ss_pred ecCCCCcCc---------CCeeEEEEEECCCCCCCCcceE---------EEec--CCccCCCCCeEEEEEEEeCCC-eEE
Confidence 001011110 0000000000000 000 00 0000 001123588889999999999 755
Q ss_pred Eec----cCCceEEEecCCccc----cc--eee--eeeccccc-----cccccCCccccc
Q psy18073 437 ISG----AYDGEVKVWNLTSQS----CV--QTY--QAHDGHVR-----DTSTRPAVETTD 479 (639)
Q Consensus 437 ~sg----s~Dg~v~iWd~~~~~----~~--~~l--~~h~~~v~-----~v~~spdg~~~~ 479 (639)
+.. +.+..|++||+.+|+ +. ..+ .+|.+.|. .++|||||+.++
T Consensus 275 ~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 275 LQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp EEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred EEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 543 445689999999987 33 333 45666665 789999998776
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=3.1e-17 Score=164.51 Aligned_cols=277 Identities=9% Similarity=-0.007 Sum_probs=169.3
Q ss_pred EEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccC-CceEEEEEcCCCCEEE-EEecCCeEEEEeCCCCCCCcccc
Q psy18073 178 CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-GHVRDVCFLPDGSQFL-SVGIDNTIKTWSSELSESDHIVP 255 (639)
Q Consensus 178 ~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~-~~V~~v~~sp~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~~ 255 (639)
.+++++++ .++++++.+++|++||+.+++.+..+..+. ..+..++|+|++++++ +++.++.|.+||+.+++..
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~---- 78 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT---- 78 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE----
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE----
Confidence 45678888 899999999999999999999888887543 2578999999998665 5557899999999876542
Q ss_pred eEEEecC-------CeeEEeeecCCCCEEEEcC--------------CeeEEEeCCCCce---eeeeecCCccEEEEEEc
Q psy18073 256 LHTIISK-------SVISSISHQRKSKIFATCG--------------DQCQLWEHERNEP---IRAFSWNVDSLHHVQFN 311 (639)
Q Consensus 256 ~~~~~~~-------~~v~~~~~~~~~~~l~~~~--------------~~i~vwd~~~~~~---~~~~~~h~~~v~~v~~s 311 (639)
...... ..+..++++|+++.+++++ +.|.+||+.+++. +..+. +...+.+++|+
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s 156 (349)
T 1jmx_B 79 -FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAA 156 (349)
T ss_dssp -EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEEC
T ss_pred -EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeEC
Confidence 222211 2367899999999888877 5899999988553 33343 33468899999
Q ss_pred CCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeec
Q psy18073 312 PIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391 (639)
Q Consensus 312 p~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 391 (639)
| +++ ++.++ +.|.+||+.+++....+........ .. .+......|......... .......+..
T Consensus 157 ~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 220 (349)
T 1jmx_B 157 D-DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRK--GY-SAPDVLYFWPHQSPRHEF---------SMLYTIARFK 220 (349)
T ss_dssp T-TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCT--TB-CCCBCCCCCCCCCTTCEE---------EEEEEEEEC-
T ss_pred C-CCc-EEEcc--CcEEEEeCCCCceeccccccccCCc--cc-cCccceeeecCCCcceeE---------EeeeeeeecC
Confidence 9 677 44444 3499999998876543221100000 00 000000011111100000 0000111111
Q ss_pred Cccce---eeeccc-cccccccccc-cccccCcccceeEEeeCC-CCcceEEeccCCceEEEecCCccccceeeeeeccc
Q psy18073 392 PREYV---RALNAT-KLERVFAKPF-VANLDGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH 465 (639)
Q Consensus 392 ~~~~~---~~~~~~-~~~~~~~~~~-~~~~~~h~~~v~~v~~sp-~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~ 465 (639)
+.... ...... .......... ...+..+...+.+++|+| +| ++++++ ++.|.+||+.+++.+..+.. ...
T Consensus 221 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~ 296 (349)
T 1jmx_B 221 DDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLIKAANL-DHT 296 (349)
T ss_dssp ------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEEEEEEC-SSC
T ss_pred CCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEEEEEcC-CCC
Confidence 00000 000000 0000000000 011223455788999999 99 888887 89999999999998888753 345
Q ss_pred cccccccCCccccccc
Q psy18073 466 VRDTSTRPAVETTDLT 481 (639)
Q Consensus 466 v~~v~~spdg~~~~~~ 481 (639)
+..++|+|||+.+.+.
T Consensus 297 ~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 297 YYCVAFDKKGDKLYLG 312 (349)
T ss_dssp CCEEEECSSSSCEEEE
T ss_pred ccceEECCCCCEEEEe
Confidence 7899999999877653
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=1.9e-18 Score=191.38 Aligned_cols=253 Identities=9% Similarity=0.006 Sum_probs=173.8
Q ss_pred hhhhhhhhhccccccccccccc---cEEEEEECCCCCeeEEEeeC---------CCcEEEEeCCCCceEEEEeccCCceE
Q psy18073 153 NATKLERVFAKPFVANLDGHKD---GISCLAKHPTKLSTIISGAY---------DGEVKVWNLTSQSCVQTYQAHDGHVR 220 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~---~V~~l~~sp~~~~~l~sgs~---------dg~i~vWd~~~~~~~~~~~~h~~~V~ 220 (639)
+.+++|+..+++....+.+|.. .|.+++||||| ++|++++. |+.|++||+.+++.+... .....+.
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-~l~~~~~ 113 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-ELPRPIQ 113 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCSSBC
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCccccce-ecCcccc
Confidence 3578999998888777776655 49999999999 88888876 789999999988762111 1135688
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceE----EE-ecC---------CeeEEeeecCCCCEEEEcCC----
Q psy18073 221 DVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLH----TI-ISK---------SVISSISHQRKSKIFATCGD---- 282 (639)
Q Consensus 221 ~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~----~~-~~~---------~~v~~~~~~~~~~~l~~~~~---- 282 (639)
.++|||||+.||+++ |+.|++||+.++......... .. ... ....+++|+|||+.|+.++.
T Consensus 114 ~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~ 192 (719)
T 1z68_A 114 YLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTD 192 (719)
T ss_dssp CEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTT
T ss_pred cceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCC
Confidence 999999999999986 889999999876543211000 00 000 11248999999999987651
Q ss_pred --------------------------------eeEEEeCCCCcee--------eeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 283 --------------------------------QCQLWEHERNEPI--------RAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 283 --------------------------------~i~vwd~~~~~~~--------~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
.+.+||+.+++.. ..+.+|...+..++|+| |++++++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~ 271 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCLQWL 271 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEEEEe
Confidence 6789999988753 22346888999999999 677777754
Q ss_pred CCC----cEEEEE----CCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcc
Q psy18073 323 SDR----SIILYD----TRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPRE 394 (639)
Q Consensus 323 ~Dg----~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 394 (639)
..+ .|.+|| +.+++....+.
T Consensus 272 ~~~~~~~~l~~~d~~~~~~~g~~~~~~~---------------------------------------------------- 299 (719)
T 1z68_A 272 KRVQNVSVLSICDFREDWQTWDCPKTQE---------------------------------------------------- 299 (719)
T ss_dssp ESSTTEEEEEEEEECSSSSSEECCGGGE----------------------------------------------------
T ss_pred ccccCeEEEEEEcccCCCCCCceEEEEe----------------------------------------------------
Confidence 332 388888 66654321000
Q ss_pred ceeeeccccccccccccccccccCccccee-----EEeeCCCCcceEE--eccCCc--eEEEecCCccccceeeeeeccc
Q psy18073 395 YVRALNATKLERVFAKPFVANLDGHKDGIS-----CLAKHPTKLSTII--SGAYDG--EVKVWNLTSQSCVQTYQAHDGH 465 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~v~~sp~~~~~l~--sgs~Dg--~v~iWd~~~~~~~~~l~~h~~~ 465 (639)
....+|...+. .++|+||| +.|+ ++..|| .|.+||+.+++ ...+..+...
T Consensus 300 -------------------~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~ 358 (719)
T 1z68_A 300 -------------------HIEESRTGWAGGFFVSTPVFSYDA-ISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWE 358 (719)
T ss_dssp -------------------EEEECSSSCSSSSSCCCCEECTTS-SCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSC
T ss_pred -------------------cccccCCceEccccCCccEECCCC-CeEEEEEEccCCceEEEEEECCCCc-eEecccCceE
Confidence 00024555555 78999999 6443 344455 67888887776 4556555556
Q ss_pred cccccccCCccccccccc
Q psy18073 466 VRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 466 v~~v~~spdg~~~~~~~~ 483 (639)
+..+.++ +++.+.+...
T Consensus 359 v~~~~~~-d~~~i~~~~~ 375 (719)
T 1z68_A 359 AINIFRV-TQDSLFYSSN 375 (719)
T ss_dssp EEEEEEE-CSSEEEEEES
T ss_pred EEEEEEE-eCCEEEEEEe
Confidence 7777777 8877666543
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=2.6e-17 Score=166.28 Aligned_cols=241 Identities=10% Similarity=0.054 Sum_probs=159.6
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCC-CCceEEEEecc-CCceEEEEEcCCCCE--EEEEe------------
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT-SQSCVQTYQAH-DGHVRDVCFLPDGSQ--FLSVG------------ 235 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~-~~~~~~~~~~h-~~~V~~v~~sp~~~~--l~s~s------------ 235 (639)
+...+..++|+|+| ++|++++.+ .|.+||+. +++........ .+.+.+++|+|||++ +++++
T Consensus 38 ~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 33467899999999 888888887 99999997 77765433211 133567899999994 45553
Q ss_pred -cCCeEEEEeCCCCCCCcccceEEE--ecCCeeEEeeecCCCCEEEEcC---CeeEEEeCC-CCcee--eeee--cCCcc
Q psy18073 236 -IDNTIKTWSSELSESDHIVPLHTI--ISKSVISSISHQRKSKIFATCG---DQCQLWEHE-RNEPI--RAFS--WNVDS 304 (639)
Q Consensus 236 -~Dg~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~-~~~~~--~~~~--~h~~~ 304 (639)
.+|++.+|++....... ...... .....+..++|+|+|+++++++ +.|.+||+. +++.. ..+. .|...
T Consensus 116 ~~~g~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLE-KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEE-EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred cCCceEEEEccCCCCcCc-ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997422210 011111 1345789999999999877654 389999998 67643 3333 24567
Q ss_pred EEEEEEcCCCCcEEEEEeC-CCcEEEEECC--CccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhcccccc
Q psy18073 305 LHHVQFNPIDKHILASCAS-DRSIILYDTR--ATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKL 381 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s~-Dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 381 (639)
+..++|+| +++++++++. +++|.+|++. +++...... . +
T Consensus 195 p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~------~--~----------------------------- 236 (365)
T 1jof_A 195 PRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHH------S--F----------------------------- 236 (365)
T ss_dssp EEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE------E--E-----------------------------
T ss_pred CCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccc------e--E-----------------------------
Confidence 89999999 7877777664 7899999865 332210000 0 0
Q ss_pred ceeeeeeeecCccceeeeccccccccccccccccccCccc------ceeEEe-eCCCCcceEEeccCC-c-----eEEEe
Q psy18073 382 ERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKD------GISCLA-KHPTKLSTIISGAYD-G-----EVKVW 448 (639)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------~v~~v~-~sp~~~~~l~sgs~D-g-----~v~iW 448 (639)
... -..+.+|.. .+..++ |+||| ++|++++.+ + .|.+|
T Consensus 237 ------------------------~~~----~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~ 287 (365)
T 1jof_A 237 ------------------------PLI----PPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGF 287 (365)
T ss_dssp ------------------------ESS----CTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEE
T ss_pred ------------------------EcC----CCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEE
Confidence 000 001123333 578999 99999 777766543 2 89999
Q ss_pred cCC-cccccee---eeeeccccccccccC---Ccccccccc
Q psy18073 449 NLT-SQSCVQT---YQAHDGHVRDTSTRP---AVETTDLTR 482 (639)
Q Consensus 449 d~~-~~~~~~~---l~~h~~~v~~v~~sp---dg~~~~~~~ 482 (639)
++. +|+.... ...+...+..++|+| ||+.++++.
T Consensus 288 ~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 288 KLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp EECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred EECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 996 5665432 333555788999999 898876553
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=5.3e-17 Score=165.54 Aligned_cols=289 Identities=11% Similarity=0.059 Sum_probs=176.6
Q ss_pred hhhccccccccccccccEEE-----EEECCCCCeeEEEeeC-CC--cEEEEeCCCCceEEEEeccCCceEEEEEcCCCCE
Q psy18073 159 RVFAKPFVANLDGHKDGISC-----LAKHPTKLSTIISGAY-DG--EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 159 ~~~~~~~~~~l~~H~~~V~~-----l~~sp~~~~~l~sgs~-dg--~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
+..++..+..+..|...+.. .+||||| ++|+.++. +| .|.+||+.+++......+|...+..++|+|||+.
T Consensus 16 ~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 16 DASTGAQVTRLTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred cCCCCcceEEecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 44456666777778776666 8999999 78887776 67 4888999999887777777766667889999999
Q ss_pred EEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEE--eeecCCCCEEEEc----------------------C--Cee
Q psy18073 231 FLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISS--ISHQRKSKIFATC----------------------G--DQC 284 (639)
Q Consensus 231 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~----------------------~--~~i 284 (639)
|+.++.++.|++||+.+++.... .......+.. ..+++++..++.. + ..|
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~----~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVV----YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEE----EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred EEEEeCCCeEEEEECCCCcceee----eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 99999999999999998654311 1112233322 3358999988731 1 279
Q ss_pred EEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC------CcEEEEECCCccccCCccccccccccccccccCC
Q psy18073 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD------RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRN 358 (639)
Q Consensus 285 ~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (639)
.+||+.+++.. .+..+...+..++|+|.+++.|+.++.+ ..|.++|...+......... .. . ..
T Consensus 171 ~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-~~--~------~~ 240 (388)
T 3pe7_A 171 MRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHA-EG--E------SC 240 (388)
T ss_dssp EEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCC-TT--E------EE
T ss_pred EEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCC-CC--c------cc
Confidence 99999988654 4445667889999999445666665543 37888887654332111100 00 0 00
Q ss_pred CCCCCCCCCCchhhhhhccccccceeeeee-eecCccc--eeeeccccccccccccccccccCcccc---eeEEeeCCCC
Q psy18073 359 IDPSLHPFEGPREYVRALNATKLERVFAKP-FVGPREY--VRALNATKLERVFAKPFVANLDGHKDG---ISCLAKHPTK 432 (639)
Q Consensus 359 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~---v~~v~~sp~~ 432 (639)
....|+|++. .+++. ...+... +.. ++........+..+.++... ...++|+|||
T Consensus 241 ~~~~~spdg~---------------~l~~~~~~~~~~~~~l~~----~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg 301 (388)
T 3pe7_A 241 THEFWVPDGS---------------ALVYVSYLKGSPDRFIYS----ADPETLENRQLTSMPACSHLMSNYDGSLMVGDG 301 (388)
T ss_dssp EEEEECTTSS---------------CEEEEEEETTCCCEEEEE----ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEE
T ss_pred ccceECCCCC---------------EEEEEecCCCCCcceEEE----EecCCCceEEEEcCCCceeeeecCCCCeEccCC
Confidence 1123455444 11111 1001000 111 11111111112223332111 2234799999
Q ss_pred cceEEec---------cCCceEEEecCCccccceeeeeecc-----------ccccccccCCccccccccc
Q psy18073 433 LSTIISG---------AYDGEVKVWNLTSQSCVQTYQAHDG-----------HVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 433 ~~~l~sg---------s~Dg~v~iWd~~~~~~~~~l~~h~~-----------~v~~v~~spdg~~~~~~~~ 483 (639)
+.|+.. +.+..|++||+.+++. ..+..|.. .+..++|||||+.+++...
T Consensus 302 -~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 302 -SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp -CCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred -CcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 666643 5567899999998765 45556655 5788999999998877653
No 171
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=2.8e-17 Score=181.64 Aligned_cols=179 Identities=11% Similarity=0.105 Sum_probs=130.2
Q ss_pred hhhhhhhhhc-----ccccccccccccc--------------EEEEEECCCCCeeEEEee--------------------
Q psy18073 153 NATKLERVFA-----KPFVANLDGHKDG--------------ISCLAKHPTKLSTIISGA-------------------- 193 (639)
Q Consensus 153 ~~~~~~~~~~-----~~~~~~l~~H~~~--------------V~~l~~sp~~~~~l~sgs-------------------- 193 (639)
+.+.+|++.+ ++..+....+... +.+++||||| ++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~ 219 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAE 219 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCc
Confidence 4688899887 7766655555443 4899999999 8898887
Q ss_pred -------------CCCcEEEEeCCCCceEEEEe--ccCCceEEEEEcCCCCEEEEEecCC-----eEEEEeCCCCCCCcc
Q psy18073 194 -------------YDGEVKVWNLTSQSCVQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDN-----TIKTWSSELSESDHI 253 (639)
Q Consensus 194 -------------~dg~i~vWd~~~~~~~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg-----~i~iwd~~~~~~~~~ 253 (639)
.+..|++||+.+++...... .|...+.+++|+|||++|++++.|+ .|.+||+.+++....
T Consensus 220 ~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 220 SKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE
T ss_pred eEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE
Confidence 44789999999887655442 5777899999999999999988876 999999998632211
Q ss_pred cceEEEecCC---eeEEeeecC--CCCEEEEcCC--eeEEEeCC-CCceeeeeecCCccEEE-EEEcCCCCcEEE-EEeC
Q psy18073 254 VPLHTIISKS---VISSISHQR--KSKIFATCGD--QCQLWEHE-RNEPIRAFSWNVDSLHH-VQFNPIDKHILA-SCAS 323 (639)
Q Consensus 254 ~~~~~~~~~~---~v~~~~~~~--~~~~l~~~~~--~i~vwd~~-~~~~~~~~~~h~~~v~~-v~~sp~~~~~l~-s~s~ 323 (639)
........ .+..++|+| +|.++++++. .++||+++ ++..+..+..|...+.. ++|+| +++.|+ +++.
T Consensus 300 --~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~sp-dg~~l~~~~~~ 376 (706)
T 2z3z_A 300 --LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDP-KGTRLYFESTE 376 (706)
T ss_dssp --EEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECT-TSSEEEEEESS
T ss_pred --EEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcC-CCCEEEEEecC
Confidence 11111221 246789999 9998887763 78888876 66777888888888877 79999 666554 4555
Q ss_pred CC----cEEEEECCCc
Q psy18073 324 DR----SIILYDTRAT 335 (639)
Q Consensus 324 Dg----~i~iwd~~~~ 335 (639)
++ .|..||+.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 54 5556665543
No 172
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=2.1e-17 Score=178.19 Aligned_cols=230 Identities=10% Similarity=0.060 Sum_probs=162.0
Q ss_pred hhhhhhhhcccccccccccc-ccEEEEEECCCCCeeEEEeeC---CCcEEEEeCCC---CceEEEEeccCCceEEEEEcC
Q psy18073 154 ATKLERVFAKPFVANLDGHK-DGISCLAKHPTKLSTIISGAY---DGEVKVWNLTS---QSCVQTYQAHDGHVRDVCFLP 226 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~-~~V~~l~~sp~~~~~l~sgs~---dg~i~vWd~~~---~~~~~~~~~h~~~V~~v~~sp 226 (639)
.+++|++.+++..+ +..|. ..|..++|||| +++++++. +...++|.+.. +... .+..+. .+...+|+|
T Consensus 45 ~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~ 119 (582)
T 3o4h_A 45 SVNAYLYDGGETVK-LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVD 119 (582)
T ss_dssp EEEEEEEETTEEEE-CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEE
T ss_pred ceeEEEEcCCCcEe-eecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCC
Confidence 46788876555544 44455 68999999998 57777765 55566665432 3333 343222 344668888
Q ss_pred CCC--EEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC------eeEEEeCCCCceeeee
Q psy18073 227 DGS--QFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD------QCQLWEHERNEPIRAF 298 (639)
Q Consensus 227 ~~~--~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~i~vwd~~~~~~~~~~ 298 (639)
||+ .+++++.|+ +.+||+.+++.. ....... .+++|+|||+.+++++. .|.+||+.+++.. .+
T Consensus 120 dg~~~~~~s~~~~~-~~l~d~~~g~~~-----~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l 190 (582)
T 3o4h_A 120 TGEAVVFTGATEDR-VALYALDGGGLR-----ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VF 190 (582)
T ss_dssp CSSCEEEEEECSSC-EEEEEEETTEEE-----EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EE
T ss_pred CCCeEEEEecCCCC-ceEEEccCCcEE-----EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Ee
Confidence 875 344445444 559999876432 1112222 78999999999996552 6999999888764 67
Q ss_pred ecCCccEEEEEEcCCCCcEEEEEeCCC--cEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 299 SWNVDSLHHVQFNPIDKHILASCASDR--SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 299 ~~h~~~v~~v~~sp~~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
..|.+.+..++|+| ||+.|++++.+| .|++||+.+++..
T Consensus 191 ~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-------------------------------------- 231 (582)
T 3o4h_A 191 DSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-------------------------------------- 231 (582)
T ss_dssp CCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE--------------------------------------
T ss_pred ecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE--------------------------------------
Confidence 78889999999999 889999888899 8999998776432
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEe--------eCCCCcceEEeccCCceEEEe
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLA--------KHPTKLSTIISGAYDGEVKVW 448 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~--------~sp~~~~~l~sgs~Dg~v~iW 448 (639)
.+.+|...+..++ |+||| .++++++.||++++|
T Consensus 232 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~ 272 (582)
T 3o4h_A 232 --------------------------------------DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVF 272 (582)
T ss_dssp --------------------------------------ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEE
T ss_pred --------------------------------------EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEE
Confidence 1223444444444 99999 999999999999999
Q ss_pred cCCccccceeeeeeccccccccccCCccccccc
Q psy18073 449 NLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 449 d~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~ 481 (639)
++ |+.+.. +.+.|.+++|+ ||+.+...
T Consensus 273 ~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 273 ID--GERVEA---PQGNHGRVVLW-RGKLVTSH 299 (582)
T ss_dssp ET--TEEECC---CSSEEEEEEEE-TTEEEEEE
T ss_pred EE--CCeecc---CCCceEEEEec-CCEEEEEE
Confidence 99 766553 34678899999 88776443
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=2.7e-16 Score=157.93 Aligned_cols=241 Identities=10% Similarity=0.052 Sum_probs=155.4
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEEecc------CC
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAH------DG 217 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~~~h------~~ 217 (639)
.+.+||..+++.+.++..+..+ .++|+||| ++++++. .++.|.+||..+++.+..+... ..
T Consensus 32 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp EEEEEETTTCCEEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred eEEEEECCCCeEEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 5667888888888888877666 99999999 7777765 3678999999999988887643 34
Q ss_pred ceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcc-cceEE-----EecCCeeEEeeecCCCCEEE-----------
Q psy18073 218 HVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESDHI-VPLHT-----IISKSVISSISHQRKSKIFA----------- 278 (639)
Q Consensus 218 ~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~~~-~~~~~-----~~~~~~v~~~~~~~~~~~l~----------- 278 (639)
....++|+|||++|+++.. +++|.+||+.+++.... ++... ....+...-++.+++|.++.
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~ 188 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVAS 188 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEee
Confidence 5678999999999998874 68999999998654322 21100 00000000111122222111
Q ss_pred ---------------------------Ec--CCeeEEEeCCCCce--eeeeec------CC----ccEEEEEEcCCCCcE
Q psy18073 279 ---------------------------TC--GDQCQLWEHERNEP--IRAFSW------NV----DSLHHVQFNPIDKHI 317 (639)
Q Consensus 279 ---------------------------~~--~~~i~vwd~~~~~~--~~~~~~------h~----~~v~~v~~sp~~~~~ 317 (639)
.. .+.+.++|+..+.. +..+.. +. .....++|+| +++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~-dg~~ 267 (361)
T 2oiz_A 189 QSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR-ASGR 267 (361)
T ss_dssp EEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET-TTTE
T ss_pred eccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec-CCCe
Confidence 11 12455555543321 111110 00 0111267788 4444
Q ss_pred EEEEeC-----------CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeee
Q psy18073 318 LASCAS-----------DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFA 386 (639)
Q Consensus 318 l~s~s~-----------Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 386 (639)
++.+.. +++|.+||+.+++.+
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v------------------------------------------------ 299 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV------------------------------------------------ 299 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEE------------------------------------------------
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEE------------------------------------------------
Confidence 444322 346888888776543
Q ss_pred eeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcc--ccceeeeeecc
Q psy18073 387 KPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ--SCVQTYQAHDG 464 (639)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~--~~~~~l~~h~~ 464 (639)
..+..+. +.+++|+|+| ++|++++. ++|.+||..++ +.+.++..+..
T Consensus 300 ---------------------------~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~ 348 (361)
T 2oiz_A 300 ---------------------------ARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAE 348 (361)
T ss_dssp ---------------------------EEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEECSSSSCEEEEEETTSCS
T ss_pred ---------------------------EEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECCCCcceeeEEeccCCC
Confidence 3344454 8999999999 88888876 99999999999 99998866677
Q ss_pred ccccccccCCccc
Q psy18073 465 HVRDTSTRPAVET 477 (639)
Q Consensus 465 ~v~~v~~spdg~~ 477 (639)
....++++|||.+
T Consensus 349 ~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 349 ASLQVQFHPVGGT 361 (361)
T ss_dssp SEEEEEECCCSCC
T ss_pred CcEEEEecCCCCC
Confidence 7889999999853
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=1.6e-15 Score=150.58 Aligned_cols=226 Identities=10% Similarity=0.083 Sum_probs=170.1
Q ss_pred cccEEEEEECCCCCeeEEEeeCC------------------------CcEEEEeCCCCceEEEEe-ccCCceEEEEEcCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYD------------------------GEVKVWNLTSQSCVQTYQ-AHDGHVRDVCFLPD 227 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~d------------------------g~i~vWd~~~~~~~~~~~-~h~~~V~~v~~sp~ 227 (639)
-+.|.+++++|+| +++++.+.+ ++|.+||..+++.+..+. ++-.....++++|+
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 3579999999999 888888877 479999999898877664 45567899999999
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcccceEEEe----------cCCeeEEeeecC-CCCEEEEcC--C-eeEEEeCCCCc
Q psy18073 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTII----------SKSVISSISHQR-KSKIFATCG--D-QCQLWEHERNE 293 (639)
Q Consensus 228 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~-~~~~l~~~~--~-~i~vwd~~~~~ 293 (639)
|+++++.+.++.|++||....... ...+. .-.....++++| ++.++++.+ + .|++|| .+++
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~----~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~ 176 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGP----LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGK 176 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCC----SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSC
T ss_pred CCEEEEECCCCEEEEEeCCCCeEE----EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCC
Confidence 999999889999999998643211 22221 122578999999 888888874 3 899999 5677
Q ss_pred eeeeeecC----------CccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCC
Q psy18073 294 PIRAFSWN----------VDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSL 363 (639)
Q Consensus 294 ~~~~~~~h----------~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (639)
.+..+... -....+++++|+++.++++...+++|++||..+++.+..+.
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~--------------------- 235 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK--------------------- 235 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC---------------------
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe---------------------
Confidence 77666422 23489999999448888888899999999998665442110
Q ss_pred CCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCC------CCcceEE
Q psy18073 364 HPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHP------TKLSTII 437 (639)
Q Consensus 364 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp------~~~~~l~ 437 (639)
..++...+.+++|+| +| ...+
T Consensus 236 ----------------------------------------------------~~~~~~~~~~~~~~pg~~~~~~g-~~~v 262 (329)
T 3fvz_A 236 ----------------------------------------------------HASFGRNVFAISYIPGFLFAVNG-KPYF 262 (329)
T ss_dssp ----------------------------------------------------CTTTTTCEEEEEEETTEEEEEEC-CCCT
T ss_pred ----------------------------------------------------ccccCCCcceeeecCCEEEEeCC-CEEe
Confidence 123445566777777 55 5555
Q ss_pred eccCCceEEEecCCccccceeee---eeccccccccccCCcccc
Q psy18073 438 SGAYDGEVKVWNLTSQSCVQTYQ---AHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 438 sgs~Dg~v~iWd~~~~~~~~~l~---~h~~~v~~v~~spdg~~~ 478 (639)
+.+.+..|++||..+|+.+..+. ++...+..|+++|||..+
T Consensus 263 ~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 263 GDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp TCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred ccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 66667799999999999998873 566678999999999443
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=7.6e-16 Score=150.58 Aligned_cols=238 Identities=11% Similarity=0.020 Sum_probs=170.1
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
.+..+..+.....+++|+|+|..+++++..++.|..||..++ ...+..+...+.+++++|+|+++++...++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 345555677788999999999338889999999999999877 666777888899999999999888887789999999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEE----cC-------------CeeEEEeCCCCceeeeeecCCccEEE
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFAT----CG-------------DQCQLWEHERNEPIRAFSWNVDSLHH 307 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~-------------~~i~vwd~~~~~~~~~~~~h~~~v~~ 307 (639)
..+++...............+..++++|+|.++++ +. +.-.||.+.....+..+..+.....+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNG 176 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCcc
Confidence 97665321111000011234678999999999887 32 11244444332334455566677899
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEECC-Cccc-cCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceee
Q psy18073 308 VQFNPIDKHILASCASDRSIILYDTR-ATVL-SRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF 385 (639)
Q Consensus 308 v~~sp~~~~~l~s~s~Dg~i~iwd~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 385 (639)
++|+| +++.+++.+.++.|.+||+. ++.. .. .
T Consensus 177 i~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~---------~------------------------------------ 210 (296)
T 3e5z_A 177 LAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQ---------G------------------------------------ 210 (296)
T ss_dssp EEECT-TSCEEEEETTTTEEEEEEECSSSCEEEE---------E------------------------------------
T ss_pred EEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCC---------C------------------------------------
Confidence 99999 77777888888999999986 3221 00 0
Q ss_pred eeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccc
Q psy18073 386 AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH 465 (639)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~ 465 (639)
..+..+...+.+++++++| ++.++. ++.|.+||.. |+.+..+..+..
T Consensus 211 ----------------------------~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~- 257 (296)
T 3e5z_A 211 ----------------------------VHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVLTPD-GDELGRVLTPQT- 257 (296)
T ss_dssp ----------------------------EEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEECTT-SCEEEEEECSSC-
T ss_pred ----------------------------eEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEECCC-CCEEEEEECCCC-
Confidence 0011233456789999999 766666 7889999986 888888887777
Q ss_pred cccccc-cCCccccccccc
Q psy18073 466 VRDTST-RPAVETTDLTRS 483 (639)
Q Consensus 466 v~~v~~-spdg~~~~~~~~ 483 (639)
+.+++| +|+++.+.++..
T Consensus 258 ~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CCEEEEESTTSCEEEEEET
T ss_pred ceeEEEECCCCCEEEEEcC
Confidence 999999 689887766543
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.70 E-value=1.1e-15 Score=154.15 Aligned_cols=240 Identities=9% Similarity=0.082 Sum_probs=153.1
Q ss_pred hhhhhhhhc--cc--cccccccccccEEEEEECCCCCeeEEEe-eCCCcEEEEeCCCCceEEE----E--ec--------
Q psy18073 154 ATKLERVFA--KP--FVANLDGHKDGISCLAKHPTKLSTIISG-AYDGEVKVWNLTSQSCVQT----Y--QA-------- 214 (639)
Q Consensus 154 ~~~~~~~~~--~~--~~~~l~~H~~~V~~l~~sp~~~~~l~sg-s~dg~i~vWd~~~~~~~~~----~--~~-------- 214 (639)
.+.+|++.. +. .+.....+......+++ ++ ++|+++ ..++.|.+|++.....+.. + .+
T Consensus 76 ~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 152 (361)
T 3scy_A 76 AVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQ 152 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTC
T ss_pred cEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCcccc
Confidence 466676654 22 33444445667788888 66 555555 4689999999975432211 1 11
Q ss_pred cCCceEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCCC------Cccc---ceEEEecCCeeEEeeecCCCCEEEEcC---
Q psy18073 215 HDGHVRDVCFLPDGSQFLSVG-IDNTIKTWSSELSES------DHIV---PLHTIISKSVISSISHQRKSKIFATCG--- 281 (639)
Q Consensus 215 h~~~V~~v~~sp~~~~l~s~s-~Dg~i~iwd~~~~~~------~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~--- 281 (639)
+...+.+++|+|+|+++++++ .++.|.+|++..... .... ..........+..++|+|+++++++++
T Consensus 153 ~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 232 (361)
T 3scy_A 153 TMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG 232 (361)
T ss_dssp SSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred CCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC
Confidence 123458899999999776655 589999999886442 1111 122233345678999999999766554
Q ss_pred CeeEEEeCCCCce--eeeee---cCCccEEEEEEcCCCCcEEEEEeC--CCcEEEEECCC--ccccCCcccccccccccc
Q psy18073 282 DQCQLWEHERNEP--IRAFS---WNVDSLHHVQFNPIDKHILASCAS--DRSIILYDTRA--TVLSRNPDEYLRETKTSI 352 (639)
Q Consensus 282 ~~i~vwd~~~~~~--~~~~~---~h~~~v~~v~~sp~~~~~l~s~s~--Dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~ 352 (639)
+.|.+||+.+++. +..+. .+.....+++|+| ++++|+++.. +++|.+|++.. ++...
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~------------- 298 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTK------------- 298 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEE-------------
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEE-------------
Confidence 3899999987754 23332 3335578999999 7887766555 48999999852 22100
Q ss_pred ccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCC
Q psy18073 353 HRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTK 432 (639)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 432 (639)
+..+.. ...+.+++|+|+|
T Consensus 299 ------------------------------------------------------------~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 299 ------------------------------------------------------------VGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp ------------------------------------------------------------EEEEEC-SSCCCEEEECTTS
T ss_pred ------------------------------------------------------------eeEecC-CCCCceEEECCCC
Confidence 011122 3456789999999
Q ss_pred cceEEecc-CCceEEEe--cCCccccceee-eeecccccccccc
Q psy18073 433 LSTIISGA-YDGEVKVW--NLTSQSCVQTY-QAHDGHVRDTSTR 472 (639)
Q Consensus 433 ~~~l~sgs-~Dg~v~iW--d~~~~~~~~~l-~~h~~~v~~v~~s 472 (639)
++|++++ .++.|.+| |..+|+..... ..+...+.+|.|.
T Consensus 318 -~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 318 -KYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp -CEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred -CEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 7776665 68999996 55577665443 2344566677664
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=1.5e-14 Score=143.89 Aligned_cols=248 Identities=10% Similarity=0.072 Sum_probs=172.5
Q ss_pred ccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC----
Q psy18073 162 AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID---- 237 (639)
Q Consensus 162 ~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D---- 237 (639)
.+.....+.++...+.+++|+|+| .+++++..++.|.+||..+++.......+...+.+++|+|+|+++++...+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 33 TAEPWLEISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKST 111 (333)
T ss_dssp ECEEEEEEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSC
T ss_pred ccceeEEEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCC
Confidence 344556677777888999999999 788888899999999998887665554567889999999999988887766
Q ss_pred CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--------eeEEEeCCCCceeeeeecCCccEEEEE
Q psy18073 238 NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--------QCQLWEHERNEPIRAFSWNVDSLHHVQ 309 (639)
Q Consensus 238 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------~i~vwd~~~~~~~~~~~~h~~~v~~v~ 309 (639)
+.|.+||..++....... .......+..++++|++.++++... .|..+|..+++... +..+...+.+++
T Consensus 112 ~~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~ 188 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIA 188 (333)
T ss_dssp CEEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEE
T ss_pred ceEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceE
Confidence 789999988754321110 0012346889999999998887652 45556655544433 333345678999
Q ss_pred EcCCCCc-EEEEEeCCCcEEEEECCC-ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeee
Q psy18073 310 FNPIDKH-ILASCASDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAK 387 (639)
Q Consensus 310 ~sp~~~~-~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 387 (639)
|+| +++ ++++.+.++.|.+||+.+ +.....+.
T Consensus 189 ~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~--------------------------------------------- 222 (333)
T 2dg1_A 189 LST-DEKVLWVTETTANRLHRIALEDDGVTIQPFG--------------------------------------------- 222 (333)
T ss_dssp ECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEE---------------------------------------------
T ss_pred ECC-CCCEEEEEeCCCCeEEEEEecCCCcCccccc---------------------------------------------
Confidence 999 666 555656688999999863 22110000
Q ss_pred eeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecc---
Q psy18073 388 PFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG--- 464 (639)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~--- 464 (639)
......+.++ ..+..++++++| .+.++...++.|.+||. +++.+..+..+..
T Consensus 223 ----------------------~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g 277 (333)
T 2dg1_A 223 ----------------------ATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEG 277 (333)
T ss_dssp ----------------------EEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred ----------------------ceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccc
Confidence 0000111223 356789999999 88887777899999998 5777777754433
Q ss_pred ---ccccccccCCcccccccccc
Q psy18073 465 ---HVRDTSTRPAVETTDLTRSF 484 (639)
Q Consensus 465 ---~v~~v~~spdg~~~~~~~~~ 484 (639)
.+.+++|+||+..+.++...
T Consensus 278 ~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 278 HMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp CSCBCCEEEECTTSCEEEEEEEC
T ss_pred cccCcceEEECCCCCEEEEEeCc
Confidence 68999999998766555433
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=3.2e-15 Score=164.88 Aligned_cols=234 Identities=8% Similarity=0.005 Sum_probs=164.3
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCC-----cEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCe------
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDG-----EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNT------ 239 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg-----~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~------ 239 (639)
+|+..+..++||||| ++||.++.++ .|++||+.+++.+.....+. .+.+++|+|||+.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccc
Confidence 466678999999999 7887665443 89999999998776433222 3678999999999999988876
Q ss_pred ----------EEEEeCCCCCCCcccceEEEe-cCCeeEEeeecCCCCEEEEcC------C-eeEEEeCCC------Cc-e
Q psy18073 240 ----------IKTWSSELSESDHIVPLHTII-SKSVISSISHQRKSKIFATCG------D-QCQLWEHER------NE-P 294 (639)
Q Consensus 240 ----------i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~------~-~i~vwd~~~------~~-~ 294 (639)
|++|++.++...... +.... +...+..+.++|||++++... . .|.+||+.+ +. .
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~-v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDIL-CAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred cccccCCCCEEEEEECCCCcccceE-EeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999875421111 11111 233577899999999887653 2 789999987 53 4
Q ss_pred eeeeecCCccEEEEEEcCCCCcEEEEEeCC----CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCch
Q psy18073 295 IRAFSWNVDSLHHVQFNPIDKHILASCASD----RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPR 370 (639)
Q Consensus 295 ~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (639)
...+..+...+.. .|+| ++..|+..+.+ +.|.+||+.++....
T Consensus 279 ~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~------------------------------- 325 (710)
T 2xdw_A 279 WVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESK------------------------------- 325 (710)
T ss_dssp CEEEECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGGG-------------------------------
T ss_pred eEEeeCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCccc-------------------------------
Confidence 6667777666655 4788 55555544443 358889987642100
Q ss_pred hhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCccc--ceeEEeeCCCCcceEEeccCCce--EE
Q psy18073 371 EYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKD--GISCLAKHPTKLSTIISGAYDGE--VK 446 (639)
Q Consensus 371 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~sp~~~~~l~sgs~Dg~--v~ 446 (639)
...+..|.. .+..++|++++ .+++++..|+. |.
T Consensus 326 ------------------------------------------~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 326 ------------------------------------------WKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQ 362 (710)
T ss_dssp ------------------------------------------CEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEE
T ss_pred ------------------------------------------ceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEE
Confidence 012223332 57788999877 89999999985 56
Q ss_pred EecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 447 VWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 447 iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
+||+.+|+.+..+..+.+.+..++++|++..+.+..+
T Consensus 363 ~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~s 399 (710)
T 2xdw_A 363 LHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFT 399 (710)
T ss_dssp EEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEE
T ss_pred EEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEe
Confidence 6677788888888888888899999999977665543
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=6.9e-16 Score=169.12 Aligned_cols=250 Identities=8% Similarity=-0.014 Sum_probs=162.7
Q ss_pred hhhhhhhccccccccccccccEE---------EEEEC--CCCCee-EEEee-CCCcEEEEeCC--C-CceEEEEec----
Q psy18073 155 TKLERVFAKPFVANLDGHKDGIS---------CLAKH--PTKLST-IISGA-YDGEVKVWNLT--S-QSCVQTYQA---- 214 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~---------~l~~s--p~~~~~-l~sgs-~dg~i~vWd~~--~-~~~~~~~~~---- 214 (639)
..+|....+.....+.+|...|. ..+|+ ||| +. |+.++ .+..|.+|++. + +. ...+..
T Consensus 49 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg-~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~ 126 (662)
T 3azo_A 49 ATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAG-GPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAV 126 (662)
T ss_dssp EEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSS-SCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCS
T ss_pred EEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCC-CeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccC
Confidence 34555433333455666665555 56565 999 66 66544 36677777775 3 43 445555
Q ss_pred -cCCceEEEEEcCCCCEEEEEecC----------CeEEEEeCCC------CCCCcccceEEEecCCeeEEeeecCCCCEE
Q psy18073 215 -HDGHVRDVCFLPDGSQFLSVGID----------NTIKTWSSEL------SESDHIVPLHTIISKSVISSISHQRKSKIF 277 (639)
Q Consensus 215 -h~~~V~~v~~sp~~~~l~s~s~D----------g~i~iwd~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 277 (639)
|...+.+++|+|||+.|++++.| ..|++||+.+ +... .+. ..+...+..++|+|||+.|
T Consensus 127 ~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~---~~~~~~~~~~~~SpDG~~l 202 (662)
T 3azo_A 127 GGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELS---DDAHRFVTGPRLSPDGRQA 202 (662)
T ss_dssp TTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESS---CSCSSEECCCEECTTSSEE
T ss_pred CCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEE---ecCCCcccCceECCCCCEE
Confidence 67789999999999999999887 5899999987 3321 111 0234577889999999988
Q ss_pred EEcC----------CeeEEEeCC-CC---ceeeeeecCCccEEEEEEcCCCCcEEEEEeCCC--cEEEEECCCccccCCc
Q psy18073 278 ATCG----------DQCQLWEHE-RN---EPIRAFSWNVDSLHHVQFNPIDKHILASCASDR--SIILYDTRATVLSRNP 341 (639)
Q Consensus 278 ~~~~----------~~i~vwd~~-~~---~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~ 341 (639)
+.++ ..|.+||+. ++ +......+|...+..++|+| |++++++++.|| .|.+||+.+++.....
T Consensus 203 a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 203 VWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp EEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred EEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCceeecc
Confidence 8654 269999998 56 44455556678999999999 677888888888 4555555444322100
Q ss_pred cccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCccc
Q psy18073 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKD 421 (639)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 421 (639)
.. .. . . . ...-.-
T Consensus 282 ~~----~~------------------~---------------------------~-----------------~-~p~w~~ 294 (662)
T 3azo_A 282 RR----EE------------------E---------------------------F-----------------A-GPLWTP 294 (662)
T ss_dssp CC----SS------------------B---------------------------S-----------------S-CCCCST
T ss_pred cc----cc------------------c---------------------------c-----------------c-Cccccc
Confidence 00 00 0 0 0 000001
Q ss_pred ceeEEeeCCCCcceEEeccCCceEEEe--cCCccccceeeeeeccccccccccCCcccccccc
Q psy18073 422 GISCLAKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 422 ~v~~v~~sp~~~~~l~sgs~Dg~v~iW--d~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~ 482 (639)
.+..++|+|++ .++++++. +.++|| |+.+++ +..+..|.+.+..+ |++++..+.+..
T Consensus 295 ~~~~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~~~~ 353 (662)
T 3azo_A 295 GMRWFAPLANG-LIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAVGVA 353 (662)
T ss_dssp TCCSEEECTTS-CEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEEEEE
T ss_pred cCceEeEeCCC-EEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEEEEE
Confidence 14568899999 89999998 999999 555554 67777777777765 256665555543
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=3.2e-14 Score=138.19 Aligned_cols=224 Identities=8% Similarity=0.122 Sum_probs=164.5
Q ss_pred ccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe------ccCCceEEEEE-cCCCCEEEEEec-CCeEE
Q psy18073 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ------AHDGHVRDVCF-LPDGSQFLSVGI-DNTIK 241 (639)
Q Consensus 170 ~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~------~h~~~V~~v~~-sp~~~~l~s~s~-Dg~i~ 241 (639)
.+|-..+.+++++|+| .++++.+.++.|.+||.. ++.+..+. +|...+.++++ .++++++++... ++.|.
T Consensus 26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 4567789999999999 888888889999999976 66666663 24467899999 577777777644 89999
Q ss_pred EEeCCCCCCCcccceEEEe--cCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeee--cCCccEEEEEEcCCCC
Q psy18073 242 TWSSELSESDHIVPLHTII--SKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFS--WNVDSLHHVQFNPIDK 315 (639)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~--~h~~~v~~v~~sp~~~ 315 (639)
+||. +++. ..... ....+..+++++++.++++... .|.+||.. ++.+..+. ++...+.+++++| ++
T Consensus 104 ~~d~-~g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~-~g 175 (286)
T 1q7f_A 104 IYNQ-YGQF-----VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND-KQ 175 (286)
T ss_dssp EECT-TSCE-----EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS-SS
T ss_pred EECC-CCcE-----EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC-CC
Confidence 9994 3332 22221 2246789999999998887653 89999964 55555554 3456789999999 78
Q ss_pred cEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccc
Q psy18073 316 HILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395 (639)
Q Consensus 316 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 395 (639)
+++++.+.++.|++||... ..+..
T Consensus 176 ~l~v~~~~~~~i~~~~~~g-~~~~~------------------------------------------------------- 199 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYEG-QYLRQ------------------------------------------------------- 199 (286)
T ss_dssp EEEEEEGGGTEEEEEETTC-CEEEE-------------------------------------------------------
T ss_pred CEEEEECCCCEEEEEcCCC-CEEEE-------------------------------------------------------
Confidence 8888888899999999643 21100
Q ss_pred eeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCc-eEEEecCCccccceeeeeecc--cccccccc
Q psy18073 396 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG-EVKVWNLTSQSCVQTYQAHDG--HVRDTSTR 472 (639)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg-~v~iWd~~~~~~~~~l~~h~~--~v~~v~~s 472 (639)
....++...+.+++++|+| .++++...++ .|.+||. +++.+..+..+.. .+.+++++
T Consensus 200 ------------------~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 200 ------------------IGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp ------------------ESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred ------------------EccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 0001233567889999999 8888888886 9999994 5777777766543 36689999
Q ss_pred CCccccc
Q psy18073 473 PAVETTD 479 (639)
Q Consensus 473 pdg~~~~ 479 (639)
|+|..+.
T Consensus 260 ~~g~l~v 266 (286)
T 1q7f_A 260 DDGSVVL 266 (286)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9997543
No 181
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.65 E-value=1.8e-15 Score=152.77 Aligned_cols=174 Identities=10% Similarity=0.083 Sum_probs=118.8
Q ss_pred hhhhhhhh-cccccccccccc--ccEEEEEECCCCCe--eEEEee-------------CCCcEEEEeCC-CCceEEEEe-
Q psy18073 154 ATKLERVF-AKPFVANLDGHK--DGISCLAKHPTKLS--TIISGA-------------YDGEVKVWNLT-SQSCVQTYQ- 213 (639)
Q Consensus 154 ~~~~~~~~-~~~~~~~l~~H~--~~V~~l~~sp~~~~--~l~sgs-------------~dg~i~vWd~~-~~~~~~~~~- 213 (639)
.+.+|++. ++++..... |. +.+.+++|+|+| + +++++. .+|++.+|++. +++....+.
T Consensus 61 ~v~~~~~~~~g~~~~~~~-~~~~g~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~ 138 (365)
T 1jof_A 61 KWSSFAVKSPTEIVHEAS-HPIGGHPRANDADTNT-RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN 138 (365)
T ss_dssp EEEEEEEEETTEEEEEEE-EECCSSGGGGCTTSCC-EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEE
T ss_pred eEEEEEECCCCCEEEeeE-eecCCCCccEEECCCC-CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEee
Confidence 57788876 555543322 21 235568999999 7 455653 68999999997 466554443
Q ss_pred ---ccCCceEEEEEcCCCCEEEEEe-cCCeEEEEeCC-CCCCCcccceEEEe---cCCeeEEeeecCCCCEEEEcC---C
Q psy18073 214 ---AHDGHVRDVCFLPDGSQFLSVG-IDNTIKTWSSE-LSESDHIVPLHTII---SKSVISSISHQRKSKIFATCG---D 282 (639)
Q Consensus 214 ---~h~~~V~~v~~sp~~~~l~s~s-~Dg~i~iwd~~-~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~---~ 282 (639)
.+...+.+++|+|||++|+++. .++.|++||+. +++.. ...... +...+..++|+|+|+.+++++ +
T Consensus 139 ~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~---~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~ 215 (365)
T 1jof_A 139 YEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE---LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN 215 (365)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE---EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE---EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC
Confidence 2556799999999999888776 46899999998 44321 112222 245688999999999877654 3
Q ss_pred eeEEEeCC--CCcee---eeee-------cCCc------cEEEEE-EcCCCCcEEEEEeCCC------cEEEEECC
Q psy18073 283 QCQLWEHE--RNEPI---RAFS-------WNVD------SLHHVQ-FNPIDKHILASCASDR------SIILYDTR 333 (639)
Q Consensus 283 ~i~vwd~~--~~~~~---~~~~-------~h~~------~v~~v~-~sp~~~~~l~s~s~Dg------~i~iwd~~ 333 (639)
.|.+|+++ +++.. ..+. +|.. .+.+++ |+| ++++|++++.+. +|.+|++.
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 89998765 55542 1221 2222 588999 999 787777665432 89999985
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.64 E-value=1e-15 Score=169.59 Aligned_cols=180 Identities=12% Similarity=0.029 Sum_probs=130.9
Q ss_pred hhhhhhhhhcccccccccccccc-----EEEEEECCCCCeeEEEeeCC---------CcEEEEeCCCCceEEEEeccCCc
Q psy18073 153 NATKLERVFAKPFVANLDGHKDG-----ISCLAKHPTKLSTIISGAYD---------GEVKVWNLTSQSCVQTYQAHDGH 218 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~-----V~~l~~sp~~~~~l~sgs~d---------g~i~vWd~~~~~~~~~~~~h~~~ 218 (639)
..+++|++.+++....+.+|... ...++||||| ++|+.++.+ +.+.+||+.+++.. .+..|.+.
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~ 113 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN 113 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence 46889999999888878887753 2447899999 888888876 56679999998754 46677888
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceE----EE-ecC---------CeeEEeeecCCCCEEEEcC---
Q psy18073 219 VRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLH----TI-ISK---------SVISSISHQRKSKIFATCG--- 281 (639)
Q Consensus 219 V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~----~~-~~~---------~~v~~~~~~~~~~~l~~~~--- 281 (639)
+..++|||||+.||.++ |+.|.+||+.++...+..... .. ... +....++|||||+.||.+.
T Consensus 114 ~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~ 192 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND 192 (740)
T ss_dssp EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC
T ss_pred ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc
Confidence 99999999999999885 789999999876543211100 00 000 1223588999999988752
Q ss_pred --------------------------------C---eeEEEeCCC---Cc--eeeeee------cCCccEEEEEEcCCCC
Q psy18073 282 --------------------------------D---QCQLWEHER---NE--PIRAFS------WNVDSLHHVQFNPIDK 315 (639)
Q Consensus 282 --------------------------------~---~i~vwd~~~---~~--~~~~~~------~h~~~v~~v~~sp~~~ 315 (639)
. .+.+||+.+ ++ ....+. +|...+..++|+| |+
T Consensus 193 ~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg 271 (740)
T 4a5s_A 193 TEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QE 271 (740)
T ss_dssp TTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TT
T ss_pred cCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CC
Confidence 0 478899988 73 222333 3778899999999 77
Q ss_pred cEEEEEeC----CCcEEEEECCCcc
Q psy18073 316 HILASCAS----DRSIILYDTRATV 336 (639)
Q Consensus 316 ~~l~s~s~----Dg~i~iwd~~~~~ 336 (639)
++++.... +..|.+||+.+++
T Consensus 272 ~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 272 RISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEEEeCCCCCEEEEEEEECCCCc
Confidence 76665433 3479999998875
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.63 E-value=4.5e-15 Score=162.62 Aligned_cols=247 Identities=10% Similarity=0.023 Sum_probs=166.8
Q ss_pred cccccccccEEEEEECCCCCeeEEEe--eCCCcEEEEeCCCCceEEEEeccCCceE---------EEEEc--CCCCE-EE
Q psy18073 167 ANLDGHKDGISCLAKHPTKLSTIISG--AYDGEVKVWNLTSQSCVQTYQAHDGHVR---------DVCFL--PDGSQ-FL 232 (639)
Q Consensus 167 ~~l~~H~~~V~~l~~sp~~~~~l~sg--s~dg~i~vWd~~~~~~~~~~~~h~~~V~---------~v~~s--p~~~~-l~ 232 (639)
..+.+|...|..++|++++ ..++++ +.++...||....+.....+..|...+. ...|+ |||+. |+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 3466899999999999987 677777 6688999999655555667777776666 66675 99998 77
Q ss_pred EEec-CCeEEEEeCC--C-CCCCcccceEE-EecCCeeEEeeecCCCCEEEEcCC------------eeEEEeCCC----
Q psy18073 233 SVGI-DNTIKTWSSE--L-SESDHIVPLHT-IISKSVISSISHQRKSKIFATCGD------------QCQLWEHER---- 291 (639)
Q Consensus 233 s~s~-Dg~i~iwd~~--~-~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~------------~i~vwd~~~---- 291 (639)
.++. +..|.+|++. . +... .+.... ..+...+..++|+|||+.|+.++. .|.+||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~-~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPR-PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCE-ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCCCE-eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 6654 5667777765 2 3221 111100 002346789999999998887652 689999988
Q ss_pred --Cceeeeee-cCCccEEEEEEcCCCCcEEEEEeCCC--------cEEEEECC-CccccCCccccccccccccccccCCC
Q psy18073 292 --NEPIRAFS-WNVDSLHHVQFNPIDKHILASCASDR--------SIILYDTR-ATVLSRNPDEYLRETKTSIHRIPRNI 359 (639)
Q Consensus 292 --~~~~~~~~-~h~~~v~~v~~sp~~~~~l~s~s~Dg--------~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (639)
++. ..+. .+...+..++|+| |++.|+.++.++ .|.+||+. ++....
T Consensus 175 ~~~~~-~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~-------------------- 232 (662)
T 3azo_A 175 DRSAV-RELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD-------------------- 232 (662)
T ss_dssp CGGGS-EESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE--------------------
T ss_pred cCCce-eEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc--------------------
Confidence 544 4454 5667888899999 888888877653 68999987 341100
Q ss_pred CCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEec
Q psy18073 360 DPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISG 439 (639)
Q Consensus 360 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sg 439 (639)
......+|...+..++|+||| ++++++
T Consensus 233 ----------------------------------------------------~~~l~~~~~~~~~~~~~spdg-~l~~~~ 259 (662)
T 3azo_A 233 ----------------------------------------------------TRTLLGGPEEAIAQAEWAPDG-SLIVAT 259 (662)
T ss_dssp ----------------------------------------------------EEEEEEETTBCEEEEEECTTS-CEEEEE
T ss_pred ----------------------------------------------------cEEeCCCCCceEcceEECCCC-eEEEEE
Confidence 001123456788999999999 788888
Q ss_pred cCCc--eEEEecCCccccceeeeeeccc--------cccccccCCcccccccccccccCccccc
Q psy18073 440 AYDG--EVKVWNLTSQSCVQTYQAHDGH--------VRDTSTRPAVETTDLTRSFGWESSDAWQ 493 (639)
Q Consensus 440 s~Dg--~v~iWd~~~~~~~~~l~~h~~~--------v~~v~~spdg~~~~~~~~~~~~~~~~~~ 493 (639)
+.|| .|.+||+.+++.......+... +..++|+|++..+..... ...++|.
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~---~~~~l~~ 320 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK---GAAVLGI 320 (662)
T ss_dssp CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS---SSCEEEE
T ss_pred CCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc---CccEEEE
Confidence 8888 6777777677655444433222 456778888876544432 3335663
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=2.7e-15 Score=153.20 Aligned_cols=236 Identities=11% Similarity=-0.002 Sum_probs=152.5
Q ss_pred hhhccccccccccccc-----cEEEEEECCCCCeeEEEeeCC---CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCE
Q psy18073 159 RVFAKPFVANLDGHKD-----GISCLAKHPTKLSTIISGAYD---GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230 (639)
Q Consensus 159 ~~~~~~~~~~l~~H~~-----~V~~l~~sp~~~~~l~sgs~d---g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 230 (639)
+..++..+..+..+.. .+..++||||| ++|+.++.+ ..|.+||+.+++......++......+.|+|||++
T Consensus 16 d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~ 94 (396)
T 3c5m_A 16 DSDTQVKVTRLTPTDIICHRNYFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERA 94 (396)
T ss_dssp CTTTCCEEEECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSE
T ss_pred cCCCCcceEEEecCCCCccceeeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCE
Confidence 3344544555554433 37889999999 777665432 47889999888765443333333334789999999
Q ss_pred EEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEE-------------------eeecCCCCEEEEcC-----C--ee
Q psy18073 231 FLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISS-------------------ISHQRKSKIFATCG-----D--QC 284 (639)
Q Consensus 231 l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~~-----~--~i 284 (639)
|+.++.++.|.+||+.+++...... ........ ..++|++..++... . .|
T Consensus 95 l~~~~~~~~l~~~d~~~~~~~~~~~----~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l 170 (396)
T 3c5m_A 95 FFYVKNELNLMKVDLETLEEQVIYT----VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRL 170 (396)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEE----CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEE
T ss_pred EEEEEcCCcEEEEECCCCCcEEEEe----cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceE
Confidence 9999999999999998765321111 01111111 46788888776542 2 89
Q ss_pred EEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC------CcEEEEECCCccccCCccccccccccccccccCC
Q psy18073 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD------RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRN 358 (639)
Q Consensus 285 ~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (639)
.+||+.+++..... .+...+..+.|+|+++..|+.++.+ ..|.+||+..+...
T Consensus 171 ~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-------------------- 229 (396)
T 3c5m_A 171 IKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-------------------- 229 (396)
T ss_dssp EEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE--------------------
T ss_pred EEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee--------------------
Confidence 99999988765544 4667889999999445656555543 35777776543211
Q ss_pred CCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCc--ccceeEEeeCCCCcceE
Q psy18073 359 IDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGH--KDGISCLAKHPTKLSTI 436 (639)
Q Consensus 359 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~v~~sp~~~~~l 436 (639)
.+..+ ...+..++|+|+| +.|
T Consensus 230 --------------------------------------------------------~l~~~~~~~~~~~~~~spdg-~~l 252 (396)
T 3c5m_A 230 --------------------------------------------------------KIKEHAEGESCTHEFWIPDG-SAM 252 (396)
T ss_dssp --------------------------------------------------------ESSCCCTTEEEEEEEECTTS-SCE
T ss_pred --------------------------------------------------------EeeccCCCccccceEECCCC-CEE
Confidence 11111 2357789999999 777
Q ss_pred EeccCC-----ceEEEecCCccccceeeeeeccccccccccC-Ccccccc
Q psy18073 437 ISGAYD-----GEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP-AVETTDL 480 (639)
Q Consensus 437 ~sgs~D-----g~v~iWd~~~~~~~~~l~~h~~~v~~v~~sp-dg~~~~~ 480 (639)
+.++.+ +.|++||+.+++...... ..+ .. +.|+| ||+.+++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVG 299 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEE
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEE
Confidence 766544 569999998886543321 111 22 88999 9986654
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=1.9e-15 Score=154.31 Aligned_cols=242 Identities=13% Similarity=0.010 Sum_probs=161.2
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEE-------------
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD------------- 221 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~------------- 221 (639)
+.+|+..+++......++......+.|+||| +.|+.++.++.|++||+.+++.......+.+....
T Consensus 62 l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 140 (396)
T 3c5m_A 62 YYLLNLETQQAVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLV 140 (396)
T ss_dssp EEEEETTTTEEEECCCSSCBCTTTCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred EEEEECCCCcEEEeecCCCCccccceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccc
Confidence 4455666666544444443334448899999 89999999999999999988876666655553333
Q ss_pred ------EEEcCCCCEEEEE-----ecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecC-CCCEEEEcC--------
Q psy18073 222 ------VCFLPDGSQFLSV-----GIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQR-KSKIFATCG-------- 281 (639)
Q Consensus 222 ------v~~sp~~~~l~s~-----s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-------- 281 (639)
+.|+|+++.++.+ ..+..|.+||+.+++.. ........+..+.|+| ++..++..+
T Consensus 141 ~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~-----~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (396)
T 3c5m_A 141 GIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE-----VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVD 215 (396)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE-----EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCS
T ss_pred cccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE-----eeccCCcccccceECCCCCCEEEEEecCCCCCCC
Confidence 3567777776654 35678999999875532 2223456788999999 787655443
Q ss_pred CeeEEEeCCCCceeeeeecC-CccEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCccccCCccccccccccccccc
Q psy18073 282 DQCQLWEHERNEPIRAFSWN-VDSLHHVQFNPIDKHILASCASD-----RSIILYDTRATVLSRNPDEYLRETKTSIHRI 355 (639)
Q Consensus 282 ~~i~vwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~~l~s~s~D-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 355 (639)
..|.+||+..++........ ...+..++|+| +++.|+.++.+ +.|.+||+.+++...
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~---------------- 278 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEE---------------- 278 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEE----------------
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEE----------------
Confidence 14778888766543333321 23688899999 77766666544 449999987654310
Q ss_pred cCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCC-CCcc
Q psy18073 356 PRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHP-TKLS 434 (639)
Q Consensus 356 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~ 434 (639)
+..+.++ . +.|+| +| +
T Consensus 279 ---------------------------------------------------------l~~~~~~----~-~~~s~~dg-~ 295 (396)
T 3c5m_A 279 ---------------------------------------------------------VMVMPPC----S-HLMSNFDG-S 295 (396)
T ss_dssp ---------------------------------------------------------EEECCSE----E-EEEECSSS-S
T ss_pred ---------------------------------------------------------eeeCCCC----C-CCccCCCC-c
Confidence 0111121 2 78999 99 7
Q ss_pred eEEecc----------------CCceEEEecCCccccceeeeeecc-----------ccccccccCCccccccccc
Q psy18073 435 TIISGA----------------YDGEVKVWNLTSQSCVQTYQAHDG-----------HVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 435 ~l~sgs----------------~Dg~v~iWd~~~~~~~~~l~~h~~-----------~v~~v~~spdg~~~~~~~~ 483 (639)
++++++ .++.|++||+.+++. ..+..+.. .+..++|+|||+.+++...
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 777643 357899999988875 44555544 2677899999988776643
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=3.1e-14 Score=142.57 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=144.3
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCC---C--cEEEEeCCCCceEEEEeccCCceEEEEEcCCCC
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYD---G--EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~d---g--~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~ 229 (639)
+.+|+..+++.. .+ ..+..++||||| +.||.++.+ + .|.+||+.+++....... .. +..++|+|||+
T Consensus 45 l~~~d~~~~~~~-~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~wspdg~ 116 (347)
T 2gop_A 45 IVIENLKNNARR-FI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWNEDSR 116 (347)
T ss_dssp EEEEETTTCCEE-EE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEECTTSS
T ss_pred EEEEeCCCCceE-Ec----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeECCCCC
Confidence 445566555432 23 568899999999 788877654 3 488889988876655543 34 99999999999
Q ss_pred EEEEEecC---------------------------CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC
Q psy18073 230 QFLSVGID---------------------------NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD 282 (639)
Q Consensus 230 ~l~s~s~D---------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 282 (639)
.|+.++.+ ..|.+||+.+++.. ..+... .+..++|+|+| +++++..
T Consensus 117 ~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~-----~~l~~~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 117 KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI-----EEFEKP-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE-----EEEEEE-TTCEEEEETTE-EEEEEEC
T ss_pred EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE-----eeecCC-CcccccCCCCe-EEEEEec
Confidence 99988743 57999999875431 111112 67788999999 7666531
Q ss_pred ---------eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCC--------cEEEEECCCccccCCccccc
Q psy18073 283 ---------QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDR--------SIILYDTRATVLSRNPDEYL 345 (639)
Q Consensus 283 ---------~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg--------~i~iwd~~~~~~~~~~~~~~ 345 (639)
...||.+.+++. ..+..+ ..+..+ +| +++.|+.++.++ .|.+|| +++..
T Consensus 190 ~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~------- 255 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD--GKEVM------- 255 (347)
T ss_dssp CCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEE-------
T ss_pred ccccccccccccEEEeCCCce-EEeccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--CCceE-------
Confidence 234554444443 444444 555554 89 777777766543 566666 32211
Q ss_pred cccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeE
Q psy18073 346 RETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISC 425 (639)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 425 (639)
....+|...+..
T Consensus 256 --------------------------------------------------------------------~l~~~~~~~~~~ 267 (347)
T 2gop_A 256 --------------------------------------------------------------------GILDEVDRGVGQ 267 (347)
T ss_dssp --------------------------------------------------------------------ESSTTCCSEEEE
T ss_pred --------------------------------------------------------------------eccccCCcccCC
Confidence 112345566775
Q ss_pred -EeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccC
Q psy18073 426 -LAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473 (639)
Q Consensus 426 -v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~sp 473 (639)
+.|+ ++ ++++++.|+.++|| +.+++.. .+..+.+.|.+++|+|
T Consensus 268 ~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 268 AKIKD-GK--VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE 311 (347)
T ss_dssp EEEET-TE--EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS
T ss_pred ccEEc-Cc--EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC
Confidence 8898 65 88888999999999 8866553 3434577888999998
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.58 E-value=3.4e-13 Score=133.74 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=159.9
Q ss_pred hhhhhhhhhccccccccc-cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc-eEEEE---------eccCCceEE
Q psy18073 153 NATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-CVQTY---------QAHDGHVRD 221 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~-~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~-~~~~~---------~~h~~~V~~ 221 (639)
+.+.+||..+++.+..+. ++-.....++++|+| +++++.+.++.|++||..... .+..+ .++-.....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ 147 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTD 147 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcE
Confidence 356778877777665554 455689999999999 889999999999999975442 55555 344557899
Q ss_pred EEEcC-CCCEEEEEe-cCCeEEEEeCCCCCCCcccceEEE------ecCCeeEEeeecCC-CCEEEEcCC--eeEEEeCC
Q psy18073 222 VCFLP-DGSQFLSVG-IDNTIKTWSSELSESDHIVPLHTI------ISKSVISSISHQRK-SKIFATCGD--QCQLWEHE 290 (639)
Q Consensus 222 v~~sp-~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~-~~~l~~~~~--~i~vwd~~ 290 (639)
|+++| ++.++++.+ .++.|++||.. +.....+..... ..-.....++++|+ +.++++..+ .|++||..
T Consensus 148 ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 148 VAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEECTTTCCEEEEECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999 888888887 69999999943 332211110000 00123789999998 676666654 89999999
Q ss_pred CCceeeeee--cCCccEEEEEEcCCCCcEEEEEe-------CCCcEEEEECCCccccCCccccccccccccccccCCCCC
Q psy18073 291 RNEPIRAFS--WNVDSLHHVQFNPIDKHILASCA-------SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDP 361 (639)
Q Consensus 291 ~~~~~~~~~--~h~~~v~~v~~sp~~~~~l~s~s-------~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (639)
+++.+..+. .+...+.+++|+| +..+++.+ .+.+|++||..+++.+..+
T Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~-------------------- 284 (329)
T 3fvz_A 227 TKEFVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF-------------------- 284 (329)
T ss_dssp TCCEEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE--------------------
T ss_pred CCcEEEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE--------------------
Confidence 899888874 4566788999998 33444333 3448999998776544211
Q ss_pred CCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccC
Q psy18073 362 SLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAY 441 (639)
Q Consensus 362 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~ 441 (639)
....++...+.+|+++|+| .++++.+.
T Consensus 285 ----------------------------------------------------~~~~~~~~~p~~ia~~~dG-~lyvad~~ 311 (329)
T 3fvz_A 285 ----------------------------------------------------KPVRKHFDMPHDIVASEDG-TVYIGDAH 311 (329)
T ss_dssp ----------------------------------------------------CCSSSCCSSEEEEEECTTS-EEEEEESS
T ss_pred ----------------------------------------------------cCCCCccCCeeEEEECCCC-CEEEEECC
Confidence 0113456678899999999 99999999
Q ss_pred CceEEEecCCc
Q psy18073 442 DGEVKVWNLTS 452 (639)
Q Consensus 442 Dg~v~iWd~~~ 452 (639)
++.|++|++..
T Consensus 312 ~~~I~~~~~~~ 322 (329)
T 3fvz_A 312 TNTVWKFTLTE 322 (329)
T ss_dssp SCCEEEEEEEE
T ss_pred CCEEEEEeCCc
Confidence 99999999753
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=3.8e-14 Score=155.82 Aligned_cols=233 Identities=10% Similarity=0.010 Sum_probs=159.4
Q ss_pred ccccccEEEEEECCCCCeeEE-----EeeCCCcEEEEeCCCCceEEEEeccCCce--EEEEEcCCCCEEEEEecCCe---
Q psy18073 170 DGHKDGISCLAKHPTKLSTII-----SGAYDGEVKVWNLTSQSCVQTYQAHDGHV--RDVCFLPDGSQFLSVGIDNT--- 239 (639)
Q Consensus 170 ~~H~~~V~~l~~sp~~~~~l~-----sgs~dg~i~vWd~~~~~~~~~~~~h~~~V--~~v~~sp~~~~l~s~s~Dg~--- 239 (639)
++|+..+..++||||| ++|| +|+.+.+|++||+.+++.+. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred cCCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCC
Confidence 3677789999999999 7887 45556789999999988641 1122223 68999999999999998876
Q ss_pred ----------EEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC--C----eeEEEeCCCCceeeeeecCCc
Q psy18073 240 ----------IKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG--D----QCQLWEHERNEPIRAFSWNVD 303 (639)
Q Consensus 240 ----------i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~----~i~vwd~~~~~~~~~~~~h~~ 303 (639)
|++|++.++............+...+..+.++|||++++.++ + .|.+||..+++ ...+..+..
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~ 272 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG 272 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC
Confidence 999999876532111111111224678999999999887654 2 56777665554 445555666
Q ss_pred cEEEEEEcCCCCcEEEEEe---CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccc
Q psy18073 304 SLHHVQFNPIDKHILASCA---SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATK 380 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s---~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 380 (639)
.+....+ ++++ +++++. .++.|.+||+.++.....
T Consensus 273 ~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~---------------------------------------- 310 (695)
T 2bkl_A 273 AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASW---------------------------------------- 310 (695)
T ss_dssp CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC----------------------------------------
T ss_pred ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCC----------------------------------------
Confidence 6666666 4244 555544 257899999876432100
Q ss_pred cceeeeeeeecCccceeeeccccccccccccccccc-cCc-ccceeEEeeCCCCcceEEeccCCceEEEecCC-ccccce
Q psy18073 381 LERVFAKPFVGPREYVRALNATKLERVFAKPFVANL-DGH-KDGISCLAKHPTKLSTIISGAYDGEVKVWNLT-SQSCVQ 457 (639)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h-~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~-~~~~~~ 457 (639)
..+ ..+ ...+..++|+ ++ .+++++..|+..+||.+. +|+.+.
T Consensus 311 ---------------------------------~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 311 ---------------------------------KEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp ---------------------------------EEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCCEEE
T ss_pred ---------------------------------eEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCCeeE
Confidence 111 122 3457778888 56 899999999999998765 466666
Q ss_pred eeeee-ccccccccccCCccccccccc
Q psy18073 458 TYQAH-DGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 458 ~l~~h-~~~v~~v~~spdg~~~~~~~~ 483 (639)
.+..+ .+.+..++++||+..+.+..+
T Consensus 356 ~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 356 TVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp ECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred EecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 66655 677889999999987765543
No 189
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=5.8e-13 Score=129.22 Aligned_cols=169 Identities=12% Similarity=0.132 Sum_probs=123.3
Q ss_pred hhhhhhhhcccccccc------ccccccEEEEEE-CCCCCeeEEEeeC-CCcEEEEeCCCCceEEEEe-ccCCceEEEEE
Q psy18073 154 ATKLERVFAKPFVANL------DGHKDGISCLAK-HPTKLSTIISGAY-DGEVKVWNLTSQSCVQTYQ-AHDGHVRDVCF 224 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l------~~H~~~V~~l~~-sp~~~~~l~sgs~-dg~i~vWd~~~~~~~~~~~-~h~~~V~~v~~ 224 (639)
.+.+|+.. +..+..+ .+|...+.++++ .+++ .++++... ++.|++|| .+++.+..+. .+...+.++++
T Consensus 52 ~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~ 128 (286)
T 1q7f_A 52 RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTV 128 (286)
T ss_dssp EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEE
T ss_pred EEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEE
Confidence 35556544 3333333 245568999999 5777 77777643 89999999 5677777664 34467899999
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEe---cCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeeeee
Q psy18073 225 LPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTII---SKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRAFS 299 (639)
Q Consensus 225 sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~ 299 (639)
+|+|+++++...++.|.+||... +. ..... ....+..+++++++.++++.. +.|.+||.. ++.+..+.
T Consensus 129 ~~~g~l~v~~~~~~~i~~~~~~g-~~-----~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 201 (286)
T 1q7f_A 129 DNKGRIIVVECKVMRVIIFDQNG-NV-----LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIG 201 (286)
T ss_dssp CTTSCEEEEETTTTEEEEECTTS-CE-----EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEES
T ss_pred eCCCCEEEEECCCCEEEEEcCCC-CE-----EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEc
Confidence 99999888888899999999653 22 22222 224688999999999888765 389999974 55666664
Q ss_pred cC--CccEEEEEEcCCCCcEEEEEeCCC-cEEEEECC
Q psy18073 300 WN--VDSLHHVQFNPIDKHILASCASDR-SIILYDTR 333 (639)
Q Consensus 300 ~h--~~~v~~v~~sp~~~~~l~s~s~Dg-~i~iwd~~ 333 (639)
.+ ...+.+++++| +++++++...++ .|.+||..
T Consensus 202 ~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 202 GEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp CTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTT
T ss_pred cCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCC
Confidence 43 36789999999 788888888776 99999953
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.55 E-value=3e-13 Score=129.89 Aligned_cols=208 Identities=9% Similarity=0.001 Sum_probs=156.7
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccC-CceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCee
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHD-GHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVI 265 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~-~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 265 (639)
++|++++.|+.|.+||.++|+.+..+..+. ..+.+++++|+|++++ +.++.|..||. +++..+.+.. .....+
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~---~~~~~~ 79 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA---PAGCEM 79 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC---CTTCEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC---CCCccc
Confidence 799999999999999999999999998776 4789999999999988 45788999999 6665432221 112467
Q ss_pred EEeeecCCCCEEEEcCC---eeEEEeCCCCceeeeeec------CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCcc
Q psy18073 266 SSISHQRKSKIFATCGD---QCQLWEHERNEPIRAFSW------NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATV 336 (639)
Q Consensus 266 ~~~~~~~~~~~l~~~~~---~i~vwd~~~~~~~~~~~~------h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~ 336 (639)
.++.+.++|.++++.++ .+..+|. +|+.+..+.. +......+++.+ +++++++.+.++.|..||.. |+
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CC
Confidence 88899999999988764 5556665 6777666642 223455667888 88999999999999999987 66
Q ss_pred ccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccc
Q psy18073 337 LSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANL 416 (639)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (639)
.+.+ +
T Consensus 157 ~~w~---------------------------------------------------------------------------~ 161 (276)
T 3no2_A 157 LLNS---------------------------------------------------------------------------V 161 (276)
T ss_dssp EEEE---------------------------------------------------------------------------E
T ss_pred EEEE---------------------------------------------------------------------------E
Confidence 5421 1
Q ss_pred cCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecc------ccccccccCCcccccc
Q psy18073 417 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG------HVRDTSTRPAVETTDL 480 (639)
Q Consensus 417 ~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~------~v~~v~~spdg~~~~~ 480 (639)
..+ ..+.++...++| .++++++.++.|..+|..+|+.+.++..+.. .+..++..++|..+..
T Consensus 162 ~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~ 229 (276)
T 3no2_A 162 KLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYIC 229 (276)
T ss_dssp ECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEE
T ss_pred ECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEE
Confidence 111 234456778899 8999998889999999999999999864421 2567777888876543
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=1.2e-12 Score=131.29 Aligned_cols=275 Identities=8% Similarity=0.068 Sum_probs=158.3
Q ss_pred CCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe----------cCCeEEEEeCCCCCCCcccceEE--Eec
Q psy18073 194 YDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG----------IDNTIKTWSSELSESDHIVPLHT--IIS 261 (639)
Q Consensus 194 ~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s----------~Dg~i~iwd~~~~~~~~~~~~~~--~~~ 261 (639)
.|+.|.+||..+++.+..+..+..+ .++|+|||+++++++ .+++|.+||..+.+....++... ...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999999888877665 899999999999886 36789999998765432211100 001
Q ss_pred CCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCceeee-eecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC-c
Q psy18073 262 KSVISSISHQRKSKIFATCG----DQCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA-T 335 (639)
Q Consensus 262 ~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~-~ 335 (639)
......++++|||+++.+++ +.|.+||+.+++.+.. +... ....+.+.|.++..+++.+.||.+.+|+... +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 23567899999999888764 3899999999988877 5432 2234667885567888999999999999865 3
Q ss_pred cccCCccccccccccccccc-cCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccc
Q psy18073 336 VLSRNPDEYLRETKTSIHRI-PRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVA 414 (639)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (639)
+...... ...+... .........+.+. .+... ...+.+....+.+....+.. .+....... .
T Consensus 185 ~~~~~~~------~~~~~~~~~~~~~~~~~~~g~---~~~~~--~~~~~v~v~d~~~~~~~~~~-----~~~~~~~~~-~ 247 (361)
T 2oiz_A 185 KVASQSR------SKQMFSVKDDPIFIAPALDKD---KAHFV--SYYGNVYSADFSGDEVKVDG-----PWSLLNDED-K 247 (361)
T ss_dssp SEEEEEE------CCCCSCTTTSCBCSCCEECSS---EEEEE--BTTSEEEEEECSSSSCEEEE-----EEESCCHHH-H
T ss_pred cEeeecc------ccceEcCCCCceEEEecccCC---EEEEE--eCCCeEEEEEecCCCceecc-----cccccCccc-c
Confidence 3221000 0000000 0000001111110 00000 00111111111111100000 000000000 0
Q ss_pred cccCcccceeEEeeCCCCcceEEecc----------CCceEEEecCCccccceeeeeeccccccccccCCcccccccccc
Q psy18073 415 NLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSF 484 (639)
Q Consensus 415 ~~~~h~~~v~~v~~sp~~~~~l~sgs----------~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~~ 484 (639)
...-.......++|+|++..++++.+ .++.|.+||+.+++.+.++..+. +..++|+|||+.+..+.
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n-- 323 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLD-- 323 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEEC--
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeC--
Confidence 00000111223789999834444332 13589999999999999998876 99999999998665432
Q ss_pred cccCcccccc
Q psy18073 485 GWESSDAWQQ 494 (639)
Q Consensus 485 ~~~~~~~~~~ 494 (639)
++....|..
T Consensus 324 -~~~v~v~D~ 332 (361)
T 2oiz_A 324 -GGNVNVYDI 332 (361)
T ss_dssp -SSCEEEEEC
T ss_pred -CCeEEEEEC
Confidence 244466643
No 192
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.52 E-value=4.6e-13 Score=136.23 Aligned_cols=175 Identities=13% Similarity=0.049 Sum_probs=127.8
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEE--cCCCCEEE
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF--LPDGSQFL 232 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~--sp~~~~l~ 232 (639)
+.+|+..+++..+...+|...+..++|+||| +.|+.++.++.|++||+.+++....+..+.+.+....| +|++++++
T Consensus 62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp EEEEETTTCEEEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred EEEEeCCCCceEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeec
Confidence 4556777888777777787777788999999 89999999999999999999887777777776655554 89999987
Q ss_pred EEe----------------------cCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecC-CCCEEEEcCC-------
Q psy18073 233 SVG----------------------IDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQR-KSKIFATCGD------- 282 (639)
Q Consensus 233 s~s----------------------~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~------- 282 (639)
... .+..|.+||+.+++. .........+..+.|+| |+..++....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (388)
T 3pe7_A 141 GIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVD 215 (388)
T ss_dssp EEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSS
T ss_pred cccccCcccccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccccccEECCCCCCEEEEEEecCCCCCc
Confidence 432 347899999998643 22223455788999999 9988775441
Q ss_pred -eeEEEeCCCCceeeeeecCC--ccEEEEEEcCCCCcEEEEEeC-CC----cEEEEECCCccc
Q psy18073 283 -QCQLWEHERNEPIRAFSWNV--DSLHHVQFNPIDKHILASCAS-DR----SIILYDTRATVL 337 (639)
Q Consensus 283 -~i~vwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~~l~s~s~-Dg----~i~iwd~~~~~~ 337 (639)
.|.++|...++. ..+..+. ..+...+|+| +++.|+..+. ++ .|.+||+.+++.
T Consensus 216 ~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 216 ARMWLINEDGTNM-RKVKTHAEGESCTHEFWVP-DGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CSEEEEETTSCCC-EESCCCCTTEEEEEEEECT-TSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred ceEEEEeCCCCce-EEeeeCCCCcccccceECC-CCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 567777765544 3343343 3578899999 6765544333 22 399999998764
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=2.9e-12 Score=126.77 Aligned_cols=224 Identities=11% Similarity=0.066 Sum_probs=163.1
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccC-----CceEEEEEcCC
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-----GHVRDVCFLPD 227 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~-----~~V~~v~~sp~ 227 (639)
+.+.++|..+++.+.++. .......++++|++ .+.++...++.|.+||..+++....+.... .....+++ .+
T Consensus 64 ~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~ 140 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YG 140 (328)
T ss_dssp TEEEEEETTTCCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ET
T ss_pred CEEEEEECcccEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-EC
Confidence 457778888888888775 34678999999998 777777689999999999999887776433 14567777 34
Q ss_pred CCEEEEEe-cCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC------------eeEEEeCCCCce
Q psy18073 228 GSQFLSVG-IDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD------------QCQLWEHERNEP 294 (639)
Q Consensus 228 ~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------~i~vwd~~~~~~ 294 (639)
++.+++.. .+++|.++|+.+++.. ...........+.++|+|++++++.+ .|.++|..+++.
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~-----~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVV-----DELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEE-----EEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEE-----EEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 44444443 4899999999986542 23333445678999999998888753 599999999988
Q ss_pred eeeeecC-CccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhh
Q psy18073 295 IRAFSWN-VDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYV 373 (639)
Q Consensus 295 ~~~~~~h-~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 373 (639)
...+... ......++|+| +++.|..+.. .|.+||..+++....
T Consensus 216 ~~~~~~~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~--------------------------------- 259 (328)
T 3dsm_A 216 EKQFKFKLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVR--------------------------------- 259 (328)
T ss_dssp EEEEECCTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSS---------------------------------
T ss_pred EEEEecCCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeee---------------------------------
Confidence 7776543 23678999999 6666666544 899999987654210
Q ss_pred hhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEec----cCCceEEEec
Q psy18073 374 RALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISG----AYDGEVKVWN 449 (639)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sg----s~Dg~v~iWd 449 (639)
..+..+.....+++++|++..+.++. ..++.|.+||
T Consensus 260 ----------------------------------------~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 260 ----------------------------------------PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp ----------------------------------------CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred ----------------------------------------eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 00111134567899999543777777 6789999999
Q ss_pred CCccccceeeee
Q psy18073 450 LTSQSCVQTYQA 461 (639)
Q Consensus 450 ~~~~~~~~~l~~ 461 (639)
.. |+.+.++..
T Consensus 300 ~~-g~~~~~i~~ 310 (328)
T 3dsm_A 300 PQ-GKLIDEFYV 310 (328)
T ss_dssp TT-CCEEEEEEE
T ss_pred CC-CCEEEEEEe
Confidence 98 999888854
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=1.6e-12 Score=126.77 Aligned_cols=232 Identities=12% Similarity=0.046 Sum_probs=160.5
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCC
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESD 251 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~ 251 (639)
+..---+..|+|++..++++...++.|..||..+++. ..+. ....+.+++++|+|+++++ . ++.|.+||..++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 3445568899996547888888899999999988765 3333 4578999999999996554 3 678999998865421
Q ss_pred cccceEEEe---cCCeeEEeeecCCCCEEEEcC-----------CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCc-
Q psy18073 252 HIVPLHTII---SKSVISSISHQRKSKIFATCG-----------DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKH- 316 (639)
Q Consensus 252 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~-----------~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~- 316 (639)
. +.... ....++.++++|+|.++++.. ....+|.+........+..+......++|+| +++
T Consensus 87 ~---~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~sp-dg~~ 162 (297)
T 3g4e_A 87 V---LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL-DHKI 162 (297)
T ss_dssp E---EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECT-TSCE
T ss_pred E---EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcC-CCCE
Confidence 1 11111 123578899999999877652 2245555543323333333445678999999 665
Q ss_pred EEEEEeCCCcEEEEECC--CccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcc
Q psy18073 317 ILASCASDRSIILYDTR--ATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPRE 394 (639)
Q Consensus 317 ~l~s~s~Dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 394 (639)
++++.+.++.|.+||+. ++....
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~------------------------------------------------------- 187 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISN------------------------------------------------------- 187 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEE-------------------------------------------------------
T ss_pred EEEecCCCCcEEEEeccCCCCcccC-------------------------------------------------------
Confidence 55666678899999873 332110
Q ss_pred ceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccccccc-C
Q psy18073 395 YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR-P 473 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~s-p 473 (639)
......+..+...+..++++++| ++.++...++.|..||..+|+.+..+..+...+++++|. |
T Consensus 188 ---------------~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~ 251 (297)
T 3g4e_A 188 ---------------RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGK 251 (297)
T ss_dssp ---------------EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESG
T ss_pred ---------------cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCC
Confidence 00001122233456789999999 888887778899999999999999998877789999998 8
Q ss_pred Ccccccccc
Q psy18073 474 AVETTDLTR 482 (639)
Q Consensus 474 dg~~~~~~~ 482 (639)
|++.+.++.
T Consensus 252 d~~~L~vt~ 260 (297)
T 3g4e_A 252 NYSEMYVTC 260 (297)
T ss_dssp GGCEEEEEE
T ss_pred CCCEEEEEc
Confidence 988776654
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=1.2e-12 Score=125.85 Aligned_cols=220 Identities=6% Similarity=-0.020 Sum_probs=150.8
Q ss_pred cEEEEEECCCCCeeEE-EeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcc
Q psy18073 175 GISCLAKHPTKLSTII-SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHI 253 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~-sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 253 (639)
...+++++|+| .+++ +.+.++.|.+||..++........+...+.+++++++|+++++.. ++.|.+||....... .
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-V 101 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-E
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-e
Confidence 67899999999 7777 557889999999766543322223445688999999999776666 889999998754321 1
Q ss_pred cceEEEecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q psy18073 254 VPLHTIISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331 (639)
Q Consensus 254 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd 331 (639)
.. ......+..+++++++.++++.. +.|.+|+..+.........+...+.+++++| +++++++...++.|.+||
T Consensus 102 ~~---~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 102 LP---FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CC---CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGGTEEEEEC
T ss_pred ee---cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCCCEEEEEe
Confidence 11 11224678999999999887754 3888887665544333333334678899999 778888777788999999
Q ss_pred CCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccc
Q psy18073 332 TRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKP 411 (639)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (639)
........
T Consensus 178 ~~~~~~~~------------------------------------------------------------------------ 185 (270)
T 1rwi_B 178 AESNNQVV------------------------------------------------------------------------ 185 (270)
T ss_dssp TTTCCEEE------------------------------------------------------------------------
T ss_pred cCCCceEe------------------------------------------------------------------------
Confidence 76532210
Q ss_pred ccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCccc
Q psy18073 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVET 477 (639)
Q Consensus 412 ~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~ 477 (639)
....+...+.+++++++| .+.++...++.|.+||............+...+.+++++|+|..
T Consensus 186 ---~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 186 ---LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp ---CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCE
T ss_pred ---ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCE
Confidence 001122456789999999 88888888899999998765433322233356789999999963
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.49 E-value=2.6e-12 Score=126.41 Aligned_cols=234 Identities=9% Similarity=0.068 Sum_probs=157.9
Q ss_pred cccccEEEEEECCCCCeeEEE-------eeCCCcEEEEeCCCCceEEEEe----ccCCceEEEEEcCC-CCEEEEEecCC
Q psy18073 171 GHKDGISCLAKHPTKLSTIIS-------GAYDGEVKVWNLTSQSCVQTYQ----AHDGHVRDVCFLPD-GSQFLSVGIDN 238 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~s-------gs~dg~i~vWd~~~~~~~~~~~----~h~~~V~~v~~sp~-~~~l~s~s~Dg 238 (639)
+.-....+++|+++| .++++ +..++.|.+||..+++...... ++...+.+++++++ |+++++.. ++
T Consensus 15 ~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp CCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred ccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 344467899999999 78887 6778999999988877543222 25567999999999 76555544 44
Q ss_pred eEEEEeCCCCCCCcc-cceEEEecCCeeEEeeecCCCCEEEEcCC-----------------eeEEEeCCCCceeeeeec
Q psy18073 239 TIKTWSSELSESDHI-VPLHTIISKSVISSISHQRKSKIFATCGD-----------------QCQLWEHERNEPIRAFSW 300 (639)
Q Consensus 239 ~i~iwd~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------~i~vwd~~~~~~~~~~~~ 300 (639)
.|.+||.. ++.... ...........+..+++++++.++++..+ .|..||.. ++... +..
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDT 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ecc
Confidence 79999987 442211 10000011235789999999998887652 45556655 44333 333
Q ss_pred CCccEEEEEEc----CCCCc-EEEEEeCCCcEEEEECC-CccccCCccccccccccccccccCCCCCCCCCCCCchhhhh
Q psy18073 301 NVDSLHHVQFN----PIDKH-ILASCASDRSIILYDTR-ATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVR 374 (639)
Q Consensus 301 h~~~v~~v~~s----p~~~~-~l~s~s~Dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 374 (639)
+......++++ | +++ ++++...++.|.+||.. ++....
T Consensus 170 ~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~----------------------------------- 213 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIEN----------------------------------- 213 (314)
T ss_dssp EESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEE-----------------------------------
T ss_pred CCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCcccc-----------------------------------
Confidence 34456889999 9 664 45555678899999975 221100
Q ss_pred hccccccceeeeeeeecCccceeeeccccccccccccccccccCcc-cceeEEeeCCCCcceEEeccCCceEEEecCCcc
Q psy18073 375 ALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHK-DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
......+.++. ..+..++++++| .+.++...++.|.+||..++
T Consensus 214 -----------------------------------~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 214 -----------------------------------KKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp -----------------------------------EEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCB
T ss_pred -----------------------------------ceEEEECCCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCC
Confidence 00001223333 456789999999 88888777889999999888
Q ss_pred ccceeeeeeccccccccccCCccccccc
Q psy18073 454 SCVQTYQAHDGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 454 ~~~~~l~~h~~~v~~v~~spdg~~~~~~ 481 (639)
+.+..+..+...+.+++|+|+|+.+.++
T Consensus 258 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~ 285 (314)
T 1pjx_A 258 QPKMRIRCPFEKPSNLHFKPQTKTIFVT 285 (314)
T ss_dssp SCSEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred cEeEEEeCCCCCceeEEECCCCCEEEEE
Confidence 8888887777788999999999754443
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.47 E-value=7.2e-13 Score=146.65 Aligned_cols=231 Identities=11% Similarity=0.054 Sum_probs=153.1
Q ss_pred cccccEEEEEECCCCCeeEEEeeCC-----CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCe------
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYD-----GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNT------ 239 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~d-----g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~------ 239 (639)
+|...+..++||||| ++||.++.+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 160 DGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp ---EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred CCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccc
Confidence 455578999999999 777776543 36999999999876532 12222467899999 99998887654
Q ss_pred --------EEEEeCCCCCCCcccceEEEec-CCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCC--ceeeeeecC
Q psy18073 240 --------IKTWSSELSESDHIVPLHTIIS-KSVISSISHQRKSKIFATCG-------DQCQLWEHERN--EPIRAFSWN 301 (639)
Q Consensus 240 --------i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~--~~~~~~~~h 301 (639)
|++|++.++...... +..... ...+..+.++|||++++... ..|.+||+.++ ++...+..+
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~l-v~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQP-VFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEE-EECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred ccCCCCCEEEEEECCCCchhCEE-EeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 899998765421111 111111 12478899999998777654 17999999887 325566666
Q ss_pred CccEEEEEEcCCCCcEEEEEeCC----CcEEEEECCCcc-ccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 302 VDSLHHVQFNPIDKHILASCASD----RSIILYDTRATV-LSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 302 ~~~v~~v~~sp~~~~~l~s~s~D----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
...+.... +| +++.|+..+.+ +.|.+||+.++. ...
T Consensus 316 ~~~~~~~~-~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~------------------------------------- 356 (741)
T 1yr2_A 316 LKAQWDFV-DG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD------------------------------------- 356 (741)
T ss_dssp SSSCEEEE-EE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEE-------------------------------------
T ss_pred CCceEEEE-ec-cCCEEEEEECCCCCCCEEEEEeCCCCccccE-------------------------------------
Confidence 55555554 47 56666666653 348889876531 000
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCC-cccc
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT-SQSC 455 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~-~~~~ 455 (639)
..+.++...+..++|+ ++ .++++...||..+||.+. +|..
T Consensus 357 -------------------------------------~l~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 357 -------------------------------------TVVPESKDNLESVGIA-GN-RLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp -------------------------------------EEECCCSSEEEEEEEE-BT-EEEEEEEETTEEEEEEEETTSCE
T ss_pred -------------------------------------EEecCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCCc
Confidence 1112334456677777 55 789999999998888665 4666
Q ss_pred ceeeeee-ccccccccccCCccccccccc
Q psy18073 456 VQTYQAH-DGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 456 ~~~l~~h-~~~v~~v~~spdg~~~~~~~~ 483 (639)
+..+..+ .+.+..++++||+..+.+..+
T Consensus 398 ~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 398 AGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp EEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred eeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 6666543 567888999999987766543
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.46 E-value=3.4e-12 Score=140.64 Aligned_cols=200 Identities=11% Similarity=0.020 Sum_probs=131.0
Q ss_pred cccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCc----------
Q psy18073 128 IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE---------- 197 (639)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~---------- 197 (639)
+....+.++.....+...+.. .....+.+||+.+++.+.....+ ..+..++|+||| +.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G-~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASG-SDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETT-CSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEECCCCCEEEEEEcCCC-CceEEEEEEECCCCCCCcccccC-cccceEEEEeCC-CEEEEEEECCccccccccccc
Confidence 334455666655554322210 01125788999888876533322 237789999999 88888887766
Q ss_pred ------EEEEeCCCCce--EEEEe--ccCCceEEEEEcCCCCEEEEEec-----CCeEEEEeCCC------CCCCcccce
Q psy18073 198 ------VKVWNLTSQSC--VQTYQ--AHDGHVRDVCFLPDGSQFLSVGI-----DNTIKTWSSEL------SESDHIVPL 256 (639)
Q Consensus 198 ------i~vWd~~~~~~--~~~~~--~h~~~V~~v~~sp~~~~l~s~s~-----Dg~i~iwd~~~------~~~~~~~~~ 256 (639)
|++|++.++.. ...+. .|...+..+.|+|||++|+.++. +..|.+||+.+ +... .
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~----~ 279 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK----W 279 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC----C
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc----e
Confidence 99999988762 22233 35666889999999999998775 67899999976 3211 2
Q ss_pred EEEe-cCCeeEEeeecCCCCEEEEcCC------eeEEEeCCCCc--eeeeeecCCc--cEEEEEEcCCCCcEEEEEeCCC
Q psy18073 257 HTII-SKSVISSISHQRKSKIFATCGD------QCQLWEHERNE--PIRAFSWNVD--SLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 257 ~~~~-~~~~v~~~~~~~~~~~l~~~~~------~i~vwd~~~~~--~~~~~~~h~~--~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
..+. +...+.. .++++|..++..++ .|.+||+.++. ....+..|.. .+.+++|++ ++.+++++..|+
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDV 357 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETT
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECC
Confidence 2222 2223333 47788876655432 68999998775 2355555544 688899997 788999999998
Q ss_pred cE--EEEECCCcc
Q psy18073 326 SI--ILYDTRATV 336 (639)
Q Consensus 326 ~i--~iwd~~~~~ 336 (639)
.. .+||+.+++
T Consensus 358 ~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 358 KNTLQLHDLATGA 370 (710)
T ss_dssp EEEEEEEETTTCC
T ss_pred EEEEEEEECCCCC
Confidence 64 555654443
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.46 E-value=4.4e-12 Score=121.80 Aligned_cols=201 Identities=6% Similarity=-0.001 Sum_probs=144.8
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe-ccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ-AHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES 250 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~-~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~ 250 (639)
+...+.+++++++| .++++.. ++.|.+||..+.... .+. .....+.+++++|+|+.+++...++.|.+|+..+...
T Consensus 65 ~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 65 GLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp SCCSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred CcCCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 34567899999999 6666665 889999998765433 332 2336789999999999888888889999997654322
Q ss_pred CcccceEEEecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 251 DHIVPLHTIISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
.. ........+..+++++++.++++.. +.|.+||...+........+...+.++++++ ++.++++...++.|.
T Consensus 142 ~~----~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 142 TV----LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVV 216 (270)
T ss_dssp EE----CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECT-TCCEEEEETTTSCEE
T ss_pred Ee----eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECC-CCCEEEEECCCCcEE
Confidence 10 0111223577899999998877765 3899999887665444334446789999999 678888877789999
Q ss_pred EEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccc
Q psy18073 329 LYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVF 408 (639)
Q Consensus 329 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (639)
+||.......
T Consensus 217 ~~~~~~~~~~---------------------------------------------------------------------- 226 (270)
T 1rwi_B 217 KLLAGSTTST---------------------------------------------------------------------- 226 (270)
T ss_dssp EECTTCSCCE----------------------------------------------------------------------
T ss_pred EEcCCCCcce----------------------------------------------------------------------
Confidence 9997543211
Q ss_pred cccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccc
Q psy18073 409 AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456 (639)
Q Consensus 409 ~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~ 456 (639)
.....+...+.+++++|+| .++++.+.++.|++++....+.+
T Consensus 227 -----~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 227 -----VLPFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp -----ECCCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGGGSC
T ss_pred -----eeccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCcccc
Confidence 0001123467899999999 88999999999999998766543
No 200
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.44 E-value=2.4e-12 Score=128.67 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=96.4
Q ss_pred ccEEEEEECCCCCeeEEEe---------eCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC---C--e
Q psy18073 174 DGISCLAKHPTKLSTIISG---------AYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID---N--T 239 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sg---------s~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D---g--~ 239 (639)
..+...++ || +.++.. +.++.|.+||+.+++... + ..+..++|+|||++|+.++.+ + .
T Consensus 15 ~~~~~~~~--dG-~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KG-ELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ET-TEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CC-cEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 46777888 88 566543 236789999998887543 3 568899999999999988764 3 3
Q ss_pred EEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-----------------------------CeeEEEeCC
Q psy18073 240 IKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-----------------------------DQCQLWEHE 290 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------------------~~i~vwd~~ 290 (639)
|.+||+.+++.. ....... +..++|+||++.|+.++ ..|.+||+.
T Consensus 87 l~~~~~~~g~~~-----~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 160 (347)
T 2gop_A 87 IWVADLETLSSK-----KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE 160 (347)
T ss_dssp EEEEETTTTEEE-----EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred EEEEECCCCceE-----EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence 777888764431 1122233 88999999999877663 268899999
Q ss_pred CCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 291 RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 291 ~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
+++.+..+.. . .+..++|+| ++ ++++++.+
T Consensus 161 ~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~ 190 (347)
T 2gop_A 161 SEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHR 190 (347)
T ss_dssp TTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECC
T ss_pred CCeEEeeecC-C-CcccccCCC-Ce-EEEEEecc
Confidence 8887455554 3 788999999 67 77777655
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.44 E-value=2.8e-11 Score=127.71 Aligned_cols=254 Identities=12% Similarity=0.068 Sum_probs=172.9
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCC--CCceEEEEeccCCceEEEEEc----C
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT--SQSCVQTYQAHDGHVRDVCFL----P 226 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~--~~~~~~~~~~h~~~V~~v~~s----p 226 (639)
+.+.++|..+++.+.++.. ...+..++|+||| +++++++.|+.|.+||+. +++.+..+.... ....++|+ |
T Consensus 177 ~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~p 253 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDT-GYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGW 253 (567)
T ss_dssp TEEEEEETTTCCEEEEEEC-SSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTC
T ss_pred CeEEEEECCCCeEEEEEeC-CCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCC
Confidence 4577788888888887763 3357799999999 888889999999999996 888888887544 46799999 6
Q ss_pred CCCEEEEEe-cCCeEEEEeCCCCCCCcccceEEEe-------cCCeeEEeeecCCCCEEEEcC---CeeEEEeCCCCcee
Q psy18073 227 DGSQFLSVG-IDNTIKTWSSELSESDHIVPLHTII-------SKSVISSISHQRKSKIFATCG---DQCQLWEHERNEPI 295 (639)
Q Consensus 227 ~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~~~~~ 295 (639)
||+++++++ .+++|.++|..+.+....++..... ....+..+..++++..++..- +.|.++|....+.+
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 999888776 4599999998886655433332211 122677788888766555443 38889998765432
Q ss_pred eee-ecCCccEEEEEEcCCCCcEEEE-EeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhh
Q psy18073 296 RAF-SWNVDSLHHVQFNPIDKHILAS-CASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYV 373 (639)
Q Consensus 296 ~~~-~~h~~~v~~v~~sp~~~~~l~s-~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 373 (639)
... ........++.|+| +++++++ +..+++|.++|+.+++.......
T Consensus 334 ~v~~i~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~v------------------------------ 382 (567)
T 1qks_A 334 KTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDT------------------------------ 382 (567)
T ss_dssp EEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEEC------------------------------
T ss_pred eeeeeeccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEec------------------------------
Confidence 221 12334577899999 6666554 44688999999998765421100
Q ss_pred hhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEecc-CCceEEEecCCc
Q psy18073 374 RALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA-YDGEVKVWNLTS 452 (639)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs-~Dg~v~iWd~~~ 452 (639)
..-..|.+.-..+ ++|++..+.+++. .+++|.++|..+
T Consensus 383 ----------------------------------------gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 383 ----------------------------------------GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp ----------------------------------------SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ----------------------------------------cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 0001233211112 5887535556553 578999999987
Q ss_pred -------cccceeeeeeccccccccccCCccccccc
Q psy18073 453 -------QSCVQTYQAHDGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 453 -------~~~~~~l~~h~~~v~~v~~spdg~~~~~~ 481 (639)
.+.++++......-.-+..+||++.+-+.
T Consensus 422 ~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 422 EGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp TTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE
T ss_pred CCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEe
Confidence 56777776654444557789999766543
No 202
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=2.3e-12 Score=127.99 Aligned_cols=218 Identities=8% Similarity=0.039 Sum_probs=152.4
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHI 253 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 253 (639)
..|.+++|+|++ ..+++.+.++.++.| .++....+..+...+.+++|+|+|++++++..++.|.+||..++...
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-- 79 (333)
T 2dg1_A 6 QDLPTLFYSGKS-NSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-- 79 (333)
T ss_dssp CCCCBCCSCGGG-GCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--
T ss_pred cccceeeecCCc-cceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE--
Confidence 357788999998 778877889999999 45667777778888899999999998888889999999999875432
Q ss_pred cceEEEecCCeeEEeeecCCCCEEEEcC------CeeEEEeCCCCceeeeee--cCCccEEEEEEcCCCCcEEEEEeC--
Q psy18073 254 VPLHTIISKSVISSISHQRKSKIFATCG------DQCQLWEHERNEPIRAFS--WNVDSLHHVQFNPIDKHILASCAS-- 323 (639)
Q Consensus 254 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~i~vwd~~~~~~~~~~~--~h~~~v~~v~~sp~~~~~l~s~s~-- 323 (639)
.........+.++++++++.++++.. +.|.+||..++.....+. .+...+.+++++| +++++++...
T Consensus 80 --~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~ 156 (333)
T 2dg1_A 80 --RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGY 156 (333)
T ss_dssp --EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCB
T ss_pred --EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEecccc
Confidence 11112346789999999999887765 269999998877543333 2445789999999 7777776653
Q ss_pred ----CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeee
Q psy18073 324 ----DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRAL 399 (639)
Q Consensus 324 ----Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (639)
.+.|..+|..+++..
T Consensus 157 ~~~~~~~l~~~~~~~~~~~------------------------------------------------------------- 175 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVT------------------------------------------------------------- 175 (333)
T ss_dssp TTBCCEEEEEECTTSCCEE-------------------------------------------------------------
T ss_pred ccCCCceEEEEeCCCCEEE-------------------------------------------------------------
Confidence 234444443322110
Q ss_pred ccccccccccccccccccCcccceeEEeeCCCCcc-eEEeccCCceEEEecCCc-cccceee--------eeeccccccc
Q psy18073 400 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTS-QSCVQTY--------QAHDGHVRDT 469 (639)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-~l~sgs~Dg~v~iWd~~~-~~~~~~l--------~~h~~~v~~v 469 (639)
.+..+...+..++|+|+| . +.++.+.++.|.+||+.+ +..+..+ .++ ..+..+
T Consensus 176 ---------------~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i 238 (333)
T 2dg1_A 176 ---------------PIIQNISVANGIALSTDE-KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSC 238 (333)
T ss_dssp ---------------EEEEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEE
T ss_pred ---------------EeecCCCcccceEECCCC-CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCce
Confidence 011122346789999999 6 556666788999999864 4433322 111 356778
Q ss_pred cccCCcccc
Q psy18073 470 STRPAVETT 478 (639)
Q Consensus 470 ~~spdg~~~ 478 (639)
+++++|...
T Consensus 239 ~~d~~G~l~ 247 (333)
T 2dg1_A 239 CIDSDDNLY 247 (333)
T ss_dssp EEBTTCCEE
T ss_pred EECCCCCEE
Confidence 899988644
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=1.1e-11 Score=122.66 Aligned_cols=220 Identities=10% Similarity=0.062 Sum_probs=153.7
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHI 253 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 253 (639)
.....+++.. + ++.++...++.|.+||..+++.+.++.. ......++++++++.+++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~~-~-~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~-- 118 (328)
T 3dsm_A 44 DVAQSMVIRD-G-IGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT-- 118 (328)
T ss_dssp SCEEEEEEET-T-EEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE--
T ss_pred ccceEEEEEC-C-EEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE--
Confidence 3467788854 4 6777777889999999999999888863 466899999999865555558999999999876532
Q ss_pred cceEEEecCC------eeEEeeecCCCCEEEEc---CCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 254 VPLHTIISKS------VISSISHQRKSKIFATC---GDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 254 ~~~~~~~~~~------~v~~~~~~~~~~~l~~~---~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
....... ....+++ .++.++++. ++.|.++|..+++.+..+.... ....++++| ++++++++..+
T Consensus 119 ---~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~-dG~l~v~~~~~ 192 (328)
T 3dsm_A 119 ---GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDK-YNKMWTITDGG 192 (328)
T ss_dssp ---EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECT-TSEEEEEBCCB
T ss_pred ---EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcC-CCCEEEEECCC
Confidence 2222222 4556667 455555554 3489999999999888776543 446789999 78877776654
Q ss_pred ----------CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCcc
Q psy18073 325 ----------RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPRE 394 (639)
Q Consensus 325 ----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 394 (639)
+.|.++|..+++....+
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~----------------------------------------------------- 219 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQF----------------------------------------------------- 219 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEE-----------------------------------------------------
T ss_pred ccCCccccCCceEEEEECCCCeEEEEE-----------------------------------------------------
Confidence 78999998876543110
Q ss_pred ceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccccee--eeeecccccccccc
Q psy18073 395 YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT--YQAHDGHVRDTSTR 472 (639)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~--l~~h~~~v~~v~~s 472 (639)
.+ ........++++|++ ..|+.+.. .|.+||..+++.... +..+......++++
T Consensus 220 --------------------~~-~~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vd 275 (328)
T 3dsm_A 220 --------------------KF-KLGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVN 275 (328)
T ss_dssp --------------------EC-CTTCCCEEEEECTTS-CEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEEC
T ss_pred --------------------ec-CCCCCceeEEEecCC-CEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEc
Confidence 00 011256889999998 66655543 899999998876432 22223567889999
Q ss_pred CCccccccc
Q psy18073 473 PAVETTDLT 481 (639)
Q Consensus 473 pdg~~~~~~ 481 (639)
|++..+-++
T Consensus 276 p~~g~lyva 284 (328)
T 3dsm_A 276 PNNGEVYVA 284 (328)
T ss_dssp TTTCCEEEE
T ss_pred CCCCeEEEE
Confidence 965554444
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.42 E-value=4.5e-11 Score=126.11 Aligned_cols=216 Identities=10% Similarity=0.044 Sum_probs=156.2
Q ss_pred CCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCC--CCCCCcccceEEEe
Q psy18073 183 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE--LSESDHIVPLHTII 260 (639)
Q Consensus 183 p~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~--~~~~~~~~~~~~~~ 260 (639)
|.+ .++++...+++|.++|..+++.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +.+. .....
T Consensus 165 ~~~-~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~-----v~~i~ 237 (567)
T 1qks_A 165 LEN-LFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-----VAEIK 237 (567)
T ss_dssp GGG-EEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE-----EEEEE
T ss_pred CCc-eEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE-----eEEEe
Confidence 444 6778888899999999999999988874 3356799999999999999999999999996 4432 34444
Q ss_pred cCCeeEEeeec----CCCCEEEEcC---CeeEEEeCCCCceeeeeec----------CCc-cEEEEEEcCCCCcEEEEEe
Q psy18073 261 SKSVISSISHQ----RKSKIFATCG---DQCQLWEHERNEPIRAFSW----------NVD-SLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 261 ~~~~v~~~~~~----~~~~~l~~~~---~~i~vwd~~~~~~~~~~~~----------h~~-~v~~v~~sp~~~~~l~s~s 322 (639)
.......++++ |||+++++++ +.+.++|..+.+++..+.. |.. .+..+..++++..++++..
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 45567899999 6999988887 3899999999998887653 222 6788999996677777777
Q ss_pred CCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccc
Q psy18073 323 SDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNAT 402 (639)
Q Consensus 323 ~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (639)
.+|.|.++|..+.+....
T Consensus 318 ~~g~v~~vd~~~~~~~~v-------------------------------------------------------------- 335 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKT-------------------------------------------------------------- 335 (567)
T ss_dssp TTTEEEEEETTCSSEEEE--------------------------------------------------------------
T ss_pred CCCeEEEEecCCCcccee--------------------------------------------------------------
Confidence 889999999865321100
Q ss_pred cccccccccccccccCcccceeEEeeCCCCcceE-EeccCCceEEEecCCccccceeeee-eccc--ccccc-ccCCccc
Q psy18073 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTI-ISGAYDGEVKVWNLTSQSCVQTYQA-HDGH--VRDTS-TRPAVET 477 (639)
Q Consensus 403 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l-~sgs~Dg~v~iWd~~~~~~~~~l~~-h~~~--v~~v~-~spdg~~ 477 (639)
..+ ........+.|+|+| +++ ++...++.|.++|+.+++.+..+.. -..+ -.... ++|++..
T Consensus 336 -----------~~i-~~~~~~~d~~~~pdg-r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 336 -----------TEI-SAERFLHDGGLDGSH-RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp -----------EEE-ECCSSEEEEEECTTS-CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred -----------eee-eccccccCceECCCC-CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCc
Confidence 000 112234578899999 655 4455688999999999998877653 1111 12333 4787554
Q ss_pred ccc
Q psy18073 478 TDL 480 (639)
Q Consensus 478 ~~~ 480 (639)
+-+
T Consensus 403 v~~ 405 (567)
T 1qks_A 403 VWA 405 (567)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 205
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.41 E-value=8.4e-12 Score=121.66 Aligned_cols=168 Identities=10% Similarity=0.025 Sum_probs=116.9
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc----CCceEEEEEcCCCC
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH----DGHVRDVCFLPDGS 229 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h----~~~V~~v~~sp~~~ 229 (639)
.+..|+..++ ...+..+...+.+++++|+| .++++...++.|.+||..+++........ ...+..++++|+|+
T Consensus 51 ~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~ 127 (296)
T 3e5z_A 51 RTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS 127 (296)
T ss_dssp EEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC
T ss_pred EEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC
Confidence 3455665554 55666677889999999999 78888777899999999888765443221 23467899999999
Q ss_pred EEEEEec-----------------CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCC
Q psy18073 230 QFLSVGI-----------------DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHE 290 (639)
Q Consensus 230 ~l~s~s~-----------------Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~ 290 (639)
++++.+. .+.|..+|.. +. . ............++++|++..+++... .|.+||+.
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~----~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-L----SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-E----EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCC-CC-E----EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 9887431 2455555544 22 1 112233446788999999998865553 89999986
Q ss_pred -CCce---eeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 291 -RNEP---IRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 291 -~~~~---~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
+++. ...+..+...+.++++++ +++++++. ++.|.+||..
T Consensus 202 ~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 202 ARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT
T ss_pred CCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC
Confidence 4544 233333555677899999 77776665 8889999975
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=8.5e-12 Score=119.71 Aligned_cols=178 Identities=12% Similarity=0.105 Sum_probs=137.6
Q ss_pred hhhhhhhhhcccccccccccc-ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccC-CceEEEEEcCCCCE
Q psy18073 153 NATKLERVFAKPFVANLDGHK-DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-GHVRDVCFLPDGSQ 230 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~-~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~-~~V~~v~~sp~~~~ 230 (639)
+.+.+||..+++.+-++..+. ..+.+++++|+| ++++ +.++.|..||. +|+.+..+..+. ..+.++.+.|+|++
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNA 90 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCE
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCE
Confidence 356788888888888888776 578999999999 8888 45788999998 899999988653 57889999999999
Q ss_pred EEEEec-CCeEEEEeCCCCCCCcccceEEE--ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCCccE
Q psy18073 231 FLSVGI-DNTIKTWSSELSESDHIVPLHTI--ISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNVDSL 305 (639)
Q Consensus 231 l~s~s~-Dg~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v 305 (639)
+++.+. ++.|..+|. +++..+....... ........++..++|.++++... .|..||.+ |+.+.++..+ ..+
T Consensus 91 lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~ 167 (276)
T 3no2_A 91 LVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTP 167 (276)
T ss_dssp EEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCC
T ss_pred EEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCc
Confidence 999887 788888886 3443322221110 01123455678899999988764 89999998 9999988765 345
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 306 HHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 306 ~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
.++.+.+ +++++++++.++.|..+|..+|+.+
T Consensus 168 ~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 168 FSSAFLD-NGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp CEEEECT-TSCEEEECBTTSEEEEECTTTCCEE
T ss_pred cceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 6778888 7889998888889999999888765
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=2.4e-11 Score=118.88 Aligned_cols=237 Identities=11% Similarity=0.020 Sum_probs=158.6
Q ss_pred cccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEE
Q psy18073 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKT 242 (639)
Q Consensus 163 ~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~i 242 (639)
+..+..+..+.......+|+|+|..+++++..++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 34455566666778899999999447888888999999998 454 4455556778999999999997776666789999
Q ss_pred EeCCCCCCCcccceEE-EecCCeeEEeeecCCCCEEEE----cC---------------CeeEEEeCCCCceeeeeecCC
Q psy18073 243 WSSELSESDHIVPLHT-IISKSVISSISHQRKSKIFAT----CG---------------DQCQLWEHERNEPIRAFSWNV 302 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~----~~---------------~~i~vwd~~~~~~~~~~~~h~ 302 (639)
||.. +... .+.... ......+..++++++|.++++ |. +.|..+|..+++..... +.
T Consensus 112 ~~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~ 187 (305)
T 3dr2_A 112 SDAD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL 187 (305)
T ss_dssp ECTT-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE
T ss_pred ECCC-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC
Confidence 9985 3321 110000 001134678999999999886 22 25777777677654433 34
Q ss_pred ccEEEEEEcCCCCcEEEEEeCC------CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhc
Q psy18073 303 DSLHHVQFNPIDKHILASCASD------RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRAL 376 (639)
Q Consensus 303 ~~v~~v~~sp~~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 376 (639)
.....++|+| +++.|+.+... +.|.+||+..+. +... .
T Consensus 188 ~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~-------~--------------------------- 231 (305)
T 3dr2_A 188 DHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDR-------R--------------------------- 231 (305)
T ss_dssp SSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTE-EEEE-------E---------------------------
T ss_pred CCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCC-------e---------------------------
Confidence 5678899999 77766666554 689999876432 1000 0
Q ss_pred cccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccc
Q psy18073 377 NATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 456 (639)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~ 456 (639)
... ....+....++++++| ++.++. .+| |.+|+. +|+.+
T Consensus 232 -----------------------------------~~~--~~~~~~pdgi~~d~~G-~lwv~~-~~g-v~~~~~-~g~~~ 270 (305)
T 3dr2_A 232 -----------------------------------HFA--SVPDGLPDGFCVDRGG-WLWSSS-GTG-VCVFDS-DGQLL 270 (305)
T ss_dssp -----------------------------------EEE--CCSSSCCCSEEECTTS-CEEECC-SSE-EEEECT-TSCEE
T ss_pred -----------------------------------EEE--ECCCCCCCeEEECCCC-CEEEec-CCc-EEEECC-CCCEE
Confidence 000 0012234568899999 655444 455 999997 67777
Q ss_pred eeeeeeccccccccccCCccccccccc
Q psy18073 457 QTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 457 ~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
..+..+. .+..++|+|+++.+-++..
T Consensus 271 ~~~~~~~-~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 271 GHIPTPG-TASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEEECSS-CCCEEEECTTSCEEEEEET
T ss_pred EEEECCC-ceeEEEEeCCCCEEEEEcC
Confidence 7776555 5889999999877665543
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=4.6e-11 Score=118.05 Aligned_cols=230 Identities=8% Similarity=0.013 Sum_probs=151.0
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCccc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIV 254 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 254 (639)
-..+.+|+|++..+++++..++.|..||..+++.. .+. ....+.+++|+|+|+++++. . ..|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 34678899985478888888899999999877643 333 35679999999999877764 3 45999998775432110
Q ss_pred ceEEEecCCeeEEeeecCCCCEEEEcCC------eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEE-EEEeCCCcE
Q psy18073 255 PLHTIISKSVISSISHQRKSKIFATCGD------QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHIL-ASCASDRSI 327 (639)
Q Consensus 255 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l-~s~s~Dg~i 327 (639)
..........+..+.++|+|.++++..+ ...||.+.+++.. .+..+.....+++|+| +++.+ ++.+.++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~-~~~~~~~~~~~i~~s~-dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT-KLFADISIPNSICFSP-DGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE-EEEEEESSEEEEEECT-TSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEE-EeeCCCcccCCeEEcC-CCCEEEEEECCCCEE
Confidence 0000001236889999999998776531 2344443345433 3333344578899999 66544 555567899
Q ss_pred EEEECC--Cc-cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccc
Q psy18073 328 ILYDTR--AT-VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKL 404 (639)
Q Consensus 328 ~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (639)
.+||+. ++ .....
T Consensus 204 ~~~d~~~~~Gl~~~~~---------------------------------------------------------------- 219 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKA---------------------------------------------------------------- 219 (326)
T ss_dssp EEEEBCTTTCCBSSCC----------------------------------------------------------------
T ss_pred EEEEcccccCCcccCc----------------------------------------------------------------
Confidence 999975 33 21100
Q ss_pred cccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccccccc-CCcccccccc
Q psy18073 405 ERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR-PAVETTDLTR 482 (639)
Q Consensus 405 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~s-pdg~~~~~~~ 482 (639)
.....+.+....+.+++++++| .+.++...++.|.+||. +++.+..+..+...+.+++|+ ||+..+.++.
T Consensus 220 ------~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 220 ------EVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp ------EEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred ------eEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 0001111223345678999999 77776666788999998 677778887777779999998 8887665543
No 209
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.37 E-value=2.2e-11 Score=133.83 Aligned_cols=194 Identities=8% Similarity=0.000 Sum_probs=127.0
Q ss_pred cccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccE--EEEEECCCCCeeEEEeeCCCc--------
Q psy18073 128 IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGI--SCLAKHPTKLSTIISGAYDGE-------- 197 (639)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V--~~l~~sp~~~~~l~sgs~dg~-------- 197 (639)
+....++++.....+...... .....+++||+.+++.+. ..+...+ ..++|+||| +.|+.++.|..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G-~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNA-ADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETT-CSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGGG
T ss_pred EEEEEECCCCCEEEEEECCCC-CceEEEEEEECCCCCCcC--CcccCcccccceEEecCC-CEEEEEEecCCCCCccccC
Confidence 444556666666554322210 112368899998887651 1122233 689999999 88998888776
Q ss_pred -----EEEEeCCCCc----eEEEEeccCCceEEEEEcCCCCEEEEEecCC----eEEEEeCCCCCCCcccceEEEecCCe
Q psy18073 198 -----VKVWNLTSQS----CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDN----TIKTWSSELSESDHIVPLHTIISKSV 264 (639)
Q Consensus 198 -----i~vWd~~~~~----~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg----~i~iwd~~~~~~~~~~~~~~~~~~~~ 264 (639)
|++|++.++. .+.....|...+.++.|+|||++|+.++.++ .|.+||..++.. .........
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~l~~~~~~ 273 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-----RLLVKGVGA 273 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-----EEEEECSSC
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-----EEeecCCCc
Confidence 9999998876 3333344667899999999999999888776 677776544321 111222334
Q ss_pred eEEeeecCCCCEEEEcC-----CeeEEEeCCCCce--eeeeec-C-CccEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 265 ISSISHQRKSKIFATCG-----DQCQLWEHERNEP--IRAFSW-N-VDSLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 265 v~~~~~~~~~~~l~~~~-----~~i~vwd~~~~~~--~~~~~~-h-~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
+....+ +++.+++.++ ..|.+||+.+++. ...+.. + ...+..++|+ ++.++++...|+..+||.+.
T Consensus 274 ~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 274 KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 444445 4444555544 2799999988763 233333 3 4568888887 57899999999999998654
No 210
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.35 E-value=4.7e-10 Score=109.18 Aligned_cols=224 Identities=9% Similarity=0.046 Sum_probs=157.4
Q ss_pred cccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEE-eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCC
Q psy18073 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY-QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL 247 (639)
Q Consensus 169 l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~-~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~ 247 (639)
+..+...+.+++++++| .+.++...++.|.+||.. ++..... ..+...+.+++++++|..+++...++.|..||..
T Consensus 10 ~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 34556789999999999 777776668899999988 5543322 2345779999999999988888778999999976
Q ss_pred CCCCcccceEEEe-cCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeee-eecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 248 SESDHIVPLHTII-SKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
+. .. ..... ....+..+++++++.++++.. +.|.+||. +++.... ...+...+.++++++ +++++++...
T Consensus 87 g~-~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~ 160 (299)
T 2z2n_A 87 GI-IK---EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS-DNALWFTENQ 160 (299)
T ss_dssp SC-EE---EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSCEEEEETT
T ss_pred Cc-EE---EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC-CCCEEEEeCC
Confidence 22 11 11111 234788999999999888764 38999998 5544322 233456789999999 7788877777
Q ss_pred CCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccc
Q psy18073 324 DRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATK 403 (639)
Q Consensus 324 Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (639)
++.|..||. +++...
T Consensus 161 ~~~i~~~~~-~g~~~~---------------------------------------------------------------- 175 (299)
T 2z2n_A 161 NNAIGRITE-SGDITE---------------------------------------------------------------- 175 (299)
T ss_dssp TTEEEEECT-TCCEEE----------------------------------------------------------------
T ss_pred CCEEEEEcC-CCcEEE----------------------------------------------------------------
Confidence 788999987 443210
Q ss_pred ccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccccee-eeeeccccccccccCCcccc
Q psy18073 404 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT-YQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 404 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~-l~~h~~~v~~v~~spdg~~~ 478 (639)
..+..+...+.+++++++| .+.++...++.|.+||. +++.... +..+...+..++++|+|...
T Consensus 176 ----------~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 239 (299)
T 2z2n_A 176 ----------FKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW 239 (299)
T ss_dssp ----------EECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred ----------eeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE
Confidence 0011223456789999999 77777777889999998 6654321 22334567889999998643
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=1.5e-11 Score=134.76 Aligned_cols=231 Identities=10% Similarity=0.121 Sum_probs=149.6
Q ss_pred cccccEEEEEECCCCCeeEEE-----eeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCe------
Q psy18073 171 GHKDGISCLAKHPTKLSTIIS-----GAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNT------ 239 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~s-----gs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~------ 239 (639)
+|...+..++||||| ++||- |+.+.+|++||+.+|+.+.... +......++|+ ||+.|+.++.|..
T Consensus 126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 466789999999999 77773 3334679999999998654311 11113578899 9999999988744
Q ss_pred -------EEEEeCCCCCCCcccceEEEe--cCCeeEEeeecCCCCEEEEcC------CeeEEEeCCCCc-eeeeeecCCc
Q psy18073 240 -------IKTWSSELSESDHIVPLHTII--SKSVISSISHQRKSKIFATCG------DQCQLWEHERNE-PIRAFSWNVD 303 (639)
Q Consensus 240 -------i~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~------~~i~vwd~~~~~-~~~~~~~h~~ 303 (639)
|++|++.++..... .+.... +......+.++|||++++... ..+.++|+.++. ....+..+.+
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~-~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDR-LVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCE-EEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred ccCCCcEEEEEECCCCcccce-EEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 99999987543211 111111 123467889999999875432 278999998774 4556666666
Q ss_pred cEEEEEEcCCCCcEEEEEeCC---CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccc
Q psy18073 304 SLHHVQFNPIDKHILASCASD---RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATK 380 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s~D---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 380 (639)
..... ++++++.+++....| +.|..+|+.++....
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~----------------------------------------- 319 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH----------------------------------------- 319 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-----------------------------------------
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-----------------------------------------
Confidence 66555 555366666666554 568888876643210
Q ss_pred cceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEec-cCCc--eEEEecCCccccce
Q psy18073 381 LERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISG-AYDG--EVKVWNLTSQSCVQ 457 (639)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sg-s~Dg--~v~iWd~~~~~~~~ 457 (639)
...+..|...+. .|++++ ..|+.. ..|| .|++||+..+ ...
T Consensus 320 --------------------------------~~~l~~~~~~~~--~~s~~g-~~lv~~~~~~g~~~l~~~d~~g~-~~~ 363 (693)
T 3iuj_A 320 --------------------------------WRDLIPERQQVL--TVHSGS-GYLFAEYMVDATARVEQFDYEGK-RVR 363 (693)
T ss_dssp --------------------------------CEEEECCCSSCE--EEEEET-TEEEEEEEETTEEEEEEECTTSC-EEE
T ss_pred --------------------------------cEEEecCCCCEE--EEEEEC-CEEEEEEEECCeeEEEEEECCCC-eeE
Confidence 022334444444 788888 555544 4454 6899998754 344
Q ss_pred eee-eeccccccccccCCccccccccc
Q psy18073 458 TYQ-AHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 458 ~l~-~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
.+. ...+.+..+.++|++..+.+..+
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred EeecCCCceEEeeecCCCCCEEEEEec
Confidence 443 23456778889999987766543
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.34 E-value=1.7e-10 Score=117.44 Aligned_cols=236 Identities=8% Similarity=-0.007 Sum_probs=152.9
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEEEeCCCCCCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDN--TIKTWSSELSESD 251 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg--~i~iwd~~~~~~~ 251 (639)
.....|+|+|+| .++++...++.|++||..++......... .... ++|+|+++.|+++..++ .|.+||...+...
T Consensus 131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 468899999999 88888888899999999887766555443 3334 99999999999988766 7888887654321
Q ss_pred cccceEEE-e-cCCeeEEeeecC-CCCEEEEcCC-eeEEEeCCCCceeee----eecCCccE--EEEEEcCCCCcEEEEE
Q psy18073 252 HIVPLHTI-I-SKSVISSISHQR-KSKIFATCGD-QCQLWEHERNEPIRA----FSWNVDSL--HHVQFNPIDKHILASC 321 (639)
Q Consensus 252 ~~~~~~~~-~-~~~~v~~~~~~~-~~~~l~~~~~-~i~vwd~~~~~~~~~----~~~h~~~v--~~v~~sp~~~~~l~s~ 321 (639)
.. .... . ....+.+++++| ++.++++..+ .|..||..++..... ..++...- ..++|+|+++.++++-
T Consensus 208 ~~--~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TR--IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EE--EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EE--eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 11 1000 1 235678899999 5665553333 799999987763322 22222222 3899999667778877
Q ss_pred eCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecc
Q psy18073 322 ASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (639)
..++.|+.||.... .. .+ .+.... ...
T Consensus 286 ~~~~~I~~~~~~g~-~~-~~------------------------------------------------~g~~~~---~g~ 312 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CE-WF------------------------------------------------CGSATQ---KTV 312 (409)
T ss_dssp TTTTEEEEECTTCC-EE-EE------------------------------------------------EECTTC---CSC
T ss_pred CCCCEEEEEecCCC-EE-EE------------------------------------------------EeCCCC---CCc
Confidence 78889999986532 10 00 000000 000
Q ss_pred ccccccccccccccccCcccceeEEeeCCCCcceEEecc-CCceEEEecCCccccceeeeee---------------ccc
Q psy18073 402 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA-YDGEVKVWNLTSQSCVQTYQAH---------------DGH 465 (639)
Q Consensus 402 ~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs-~Dg~v~iWd~~~~~~~~~l~~h---------------~~~ 465 (639)
.++ ......-.....++++|+| .++++-+ .++.|+.||+.+|. +.++.++ -..
T Consensus 313 ------~dg---~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~ 381 (409)
T 3hrp_A 313 ------QDG---LREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNY 381 (409)
T ss_dssp ------BCE---EGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSS
T ss_pred ------CCC---cccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCC
Confidence 000 0001122346889999999 7888887 89999999987776 4445454 134
Q ss_pred cccccccCCcccc
Q psy18073 466 VRDTSTRPAVETT 478 (639)
Q Consensus 466 v~~v~~spdg~~~ 478 (639)
...++++|+|..+
T Consensus 382 P~giavd~~g~ly 394 (409)
T 3hrp_A 382 PYDICYDGEGGYW 394 (409)
T ss_dssp EEEEEECSSSEEE
T ss_pred ceEEEEcCCCCEE
Confidence 6778888886443
No 213
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.32 E-value=4.3e-10 Score=109.46 Aligned_cols=219 Identities=8% Similarity=-0.006 Sum_probs=154.6
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEE--eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY--QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~--~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~ 249 (639)
+...+.+++++++| .+.++...++.|..||.. ++. ..+ ......+.++++.|+|+++++...++.|.+||. ++.
T Consensus 55 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 55 PDAKVMCLTISSDG-EVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred ccCceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 45679999999999 777777778899999976 432 223 234567899999999998888878899999998 433
Q ss_pred CCcccceEEE-ecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeee-eecCCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 250 SDHIVPLHTI-ISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 250 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
.. .... .....+..+++++++.++++.. +.|..||. +++.... +..+...+.++++++ ++++.++...++
T Consensus 131 ~~----~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~ 204 (299)
T 2z2n_A 131 IR----EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGN-DDALWFVEIIGN 204 (299)
T ss_dssp EE----EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTT
T ss_pred EE----EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCCc
Confidence 21 1111 1234688999999998888765 38999998 6655432 333456788999999 678777766788
Q ss_pred cEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccc
Q psy18073 326 SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLE 405 (639)
Q Consensus 326 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (639)
.|.+||. ++....
T Consensus 205 ~i~~~~~-~g~~~~------------------------------------------------------------------ 217 (299)
T 2z2n_A 205 KIGRITT-SGEITE------------------------------------------------------------------ 217 (299)
T ss_dssp EEEEECT-TCCEEE------------------------------------------------------------------
T ss_pred eEEEECC-CCcEEE------------------------------------------------------------------
Confidence 9999997 443210
Q ss_pred ccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceee--eeeccccccccccCCccccc
Q psy18073 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY--QAHDGHVRDTSTRPAVETTD 479 (639)
Q Consensus 406 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l--~~h~~~v~~v~~spdg~~~~ 479 (639)
..+..+...+.+++++++| .+.++...++.|..||. +++ +..+ ..+...+.++++ ++|....
T Consensus 218 --------~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v 281 (299)
T 2z2n_A 218 --------FKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWF 281 (299)
T ss_dssp --------EECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEE
T ss_pred --------EECCCCCCCceeEEECCCC-CEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEE
Confidence 0011234567899999999 77777767889999998 443 2233 234457788888 8876543
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.31 E-value=1.9e-11 Score=121.38 Aligned_cols=144 Identities=14% Similarity=0.109 Sum_probs=106.2
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc-----------eEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEE
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-----------CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~-----------~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iw 243 (639)
.++.+++++.. .++++|+.| .+++|++.+.+ ..... .+.+ |+.|+| |+++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 68999999999 899999988 56669865432 11222 3666 999999 99999998 89999999
Q ss_pred eCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 244 SSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 244 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
|+.+..... ........+.++.+.+....+++.++.+.+||+.++.... +...|.+++|+| +| ++.|..
T Consensus 112 dv~sl~~~~----~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSp-kG--~~vg~~ 180 (388)
T 1xip_A 112 DLEELSEFR----TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTN-SQ--LAVLLK 180 (388)
T ss_dssp ESSSTTCEE----EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECS-SE--EEEEET
T ss_pred EchhhhccC----ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcC-Cc--eEEEEc
Confidence 998755321 1122344567776665543333344599999999887653 456899999999 66 678899
Q ss_pred CCcEEEEECCCcc
Q psy18073 324 DRSIILYDTRATV 336 (639)
Q Consensus 324 Dg~i~iwd~~~~~ 336 (639)
||++++|+...+.
T Consensus 181 dg~i~~~~~~~~~ 193 (388)
T 1xip_A 181 DRSFQSFAWRNGE 193 (388)
T ss_dssp TSCEEEEEEETTE
T ss_pred CCcEEEEcCCCcc
Confidence 9999999876544
No 215
>1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A
Probab=99.30 E-value=8.6e-12 Score=124.04 Aligned_cols=95 Identities=49% Similarity=0.864 Sum_probs=77.8
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccccccccchHHHHHHHHHHHhhcCCCCccCchhHHHHhCCcCCCCCCcchHHH
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQE 80 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~d~~e 80 (639)
|||||||+||||+++|+||.+++....... .....+...|+++|..++.+.. .+.|..+++.+++.....+.|||++|
T Consensus 14 nTCYmNSvLQ~L~~~~~~r~~~~~~~~~~~-~~~~~~~~~l~~lf~~l~~~~~-~~~~~~l~~~~~~~~~~~~~QqDA~E 91 (353)
T 1nb8_A 14 ATCYMNSLLQTLFFTNQLRKAVYMMPTEGD-DSSKSVPLALQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQE 91 (353)
T ss_dssp TTTTHHHHHHHHHTCHHHHHHHHTSCCTTS-CTTTCHHHHHHHHHHHHHHCSS-CBCCHHHHHHHTCCBTTTTTTSCHHH
T ss_pred hhhHHHHHHHHHHCCHHHHHHHHhCCCCCC-cccccHHHHHHHHHHHHhhcCC-CCCCHHHHhhcCCCCCCcccchhHHH
Confidence 799999999999999999999987653322 1224688999999999987654 47788898888865457889999999
Q ss_pred HHHHHHHHHHHHhcCCC
Q psy18073 81 LCRVLFDALETQFKGSK 97 (639)
Q Consensus 81 ~~~~l~~~l~~~~~~~~ 97 (639)
|+..|++.|+..++...
T Consensus 92 Fl~~LLd~L~~~~~~~~ 108 (353)
T 1nb8_A 92 LCRVLLDNVENKMKGTC 108 (353)
T ss_dssp HHHHHHHHHHHHTTTST
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999887543
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.30 E-value=1.7e-11 Score=121.73 Aligned_cols=174 Identities=6% Similarity=-0.002 Sum_probs=133.5
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC------CcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCC
Q psy18073 218 HVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES------DHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHE 290 (639)
Q Consensus 218 ~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~ 290 (639)
.++.+++++...++++|+.|+ +.+|++..... ....+........ |..++| ++.+++++.+ .|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEEch
Confidence 689999999999999999885 66698653220 0011223344556 999999 8888888865 99999998
Q ss_pred CCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCch
Q psy18073 291 RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPR 370 (639)
Q Consensus 291 ~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (639)
+.........|...+.++.+.+ . + +++++.||.|.+||+.++...
T Consensus 115 sl~~~~~~~~~~~~v~~i~~~~-p-~-~av~~~dG~L~v~dl~~~~~~-------------------------------- 159 (388)
T 1xip_A 115 ELSEFRTVTSFEKPVFQLKNVN-N-T-LVILNSVNDLSALDLRTKSTK-------------------------------- 159 (388)
T ss_dssp STTCEEEEEECSSCEEEEEECS-S-E-EEEEETTSEEEEEETTTCCEE--------------------------------
T ss_pred hhhccCccceeecceeeEEecC-C-C-EEEEECCCCEEEEEccCCccc--------------------------------
Confidence 8877777778888899988876 2 2 888899999999999764321
Q ss_pred hhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecC
Q psy18073 371 EYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 450 (639)
Q Consensus 371 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~ 450 (639)
.+...|+|++|||+| ++.|..||++++|+.
T Consensus 160 -----------------------------------------------~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 160 -----------------------------------------------QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp -----------------------------------------------EEEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred -----------------------------------------------cccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 134579999999998 677888999999988
Q ss_pred Ccccc--ceee------e---eeccccccccccCCcccccc
Q psy18073 451 TSQSC--VQTY------Q---AHDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 451 ~~~~~--~~~l------~---~h~~~v~~v~~spdg~~~~~ 480 (639)
..++. ..++ . +|...|.+|.|.+++..+..
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 77765 5555 2 36789999999999876643
No 217
>2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens}
Probab=99.28 E-value=6.6e-12 Score=126.03 Aligned_cols=96 Identities=25% Similarity=0.354 Sum_probs=79.8
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCccccccc------ccchHHHHHHHHHHHhhcCCCCccCchhHHHHhCCcCC--CC
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIA------EETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESS--DA 72 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~~------~~~~i~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 72 (639)
|||||||+||||+++|+||.+++...+..... ....+...|+.+|..++.+....+.|..|++.++...+ ..
T Consensus 16 NTCYmNSvLQ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L~~~l~~~~~~~i~P~~~~~~l~~~~~~f~~ 95 (367)
T 2y6e_A 16 NTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSG 95 (367)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHTTCGGGGCCSSCTTSCTTHHHHHHHHHHHHHTSSSCSEECCHHHHHHHHHHCGGGCS
T ss_pred cchHHHHHHHHHHCCHHHHHHHHcCchhhhccccCCCCcchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHhhhhcCC
Confidence 79999999999999999999999865543221 12358899999999998877788999999988775544 67
Q ss_pred CCcchHHHHHHHHHHHHHHHhcCC
Q psy18073 73 WQQHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 73 ~~q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
+.|||++||+..|++.|+..+...
T Consensus 96 ~~QqDA~Efl~~LLd~L~~~l~~~ 119 (367)
T 2y6e_A 96 YQQQDSQELLAFLLDGLHEDLNRV 119 (367)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTCSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999987643
No 218
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=6.9e-10 Score=108.94 Aligned_cols=196 Identities=8% Similarity=0.065 Sum_probs=133.8
Q ss_pred cccccEEEEEECCC-CCeeEEEeeCCCcEEEEeCCCCceEEE-Eec----cCCceEEEEEcCCCCEEEEEecC-------
Q psy18073 171 GHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQT-YQA----HDGHVRDVCFLPDGSQFLSVGID------- 237 (639)
Q Consensus 171 ~H~~~V~~l~~sp~-~~~~l~sgs~dg~i~vWd~~~~~~~~~-~~~----h~~~V~~v~~sp~~~~l~s~s~D------- 237 (639)
++...+.+++++++ | .++++.. ++.|.+||.. ++.... ... +...+.+++++++|+++++...+
T Consensus 68 ~~~~~~~~i~~~~~~g-~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 68 GYGGIPAGCQCDRDAN-QLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp TEECCEEEEEECSSSS-EEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CCCCCCceEEEecCCC-cEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 36678999999999 7 6666554 4479999988 765433 211 12458899999999988887665
Q ss_pred --------CeEEEEeCCCCCCCcccceEEEecCCeeEEeeec----CCCCEE-EEcC--CeeEEEeCC-CCc-----eee
Q psy18073 238 --------NTIKTWSSELSESDHIVPLHTIISKSVISSISHQ----RKSKIF-ATCG--DQCQLWEHE-RNE-----PIR 296 (639)
Q Consensus 238 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~~~--~~i~vwd~~-~~~-----~~~ 296 (639)
+.|..||.. ++. ............++++ +++..+ ++.. +.|.+||.. +++ ...
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~-----~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQM-----IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SCE-----EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEE
T ss_pred cccccCCCCeEEEECCC-CCE-----EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEE
Confidence 567777765 221 1111222356788899 998644 4433 389999986 443 223
Q ss_pred eeecCC-ccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhh
Q psy18073 297 AFSWNV-DSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRA 375 (639)
Q Consensus 297 ~~~~h~-~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 375 (639)
.+.++. ..+..+++++ +++++++...++.|.+||..+++..
T Consensus 219 ~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~------------------------------------- 260 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPK------------------------------------- 260 (314)
T ss_dssp ECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCS-------------------------------------
T ss_pred ECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEe-------------------------------------
Confidence 334444 6688999999 7888888878899999998755432
Q ss_pred ccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcc-eEEeccCCceEEEecCCc
Q psy18073 376 LNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTS 452 (639)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-~l~sgs~Dg~v~iWd~~~ 452 (639)
..+..+...+.+++|+|+| . +.++...++.|..|++..
T Consensus 261 --------------------------------------~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 261 --------------------------------------MRIRCPFEKPSNLHFKPQT-KTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp --------------------------------------EEEECSSSCEEEEEECTTS-SEEEEEETTTTEEEEEECSS
T ss_pred --------------------------------------EEEeCCCCCceeEEECCCC-CEEEEEeCCCCeEEEEeCCC
Confidence 1112244568899999999 6 666667778999999764
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.24 E-value=1.5e-10 Score=115.33 Aligned_cols=237 Identities=8% Similarity=0.034 Sum_probs=143.9
Q ss_pred ccEEEEEECCCCCeeEEEee--CCCcEEEEeCCCCceEEEE-------eccCCceEEEEEcCCCCEEEEEec-----CCe
Q psy18073 174 DGISCLAKHPTKLSTIISGA--YDGEVKVWNLTSQSCVQTY-------QAHDGHVRDVCFLPDGSQFLSVGI-----DNT 239 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs--~dg~i~vWd~~~~~~~~~~-------~~h~~~V~~v~~sp~~~~l~s~s~-----Dg~ 239 (639)
..+..++++|+| +++++.. .++.++||.+.+++. ..+ .+|-..+.+|+++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 689999999999 8888864 234366666655543 322 134567999999999987776544 689
Q ss_pred EEEEeCCCCCCCcccceEE--EecCCeeEEeeecCC-CCEEEEcC-----CeeEEEeCCCCceeeeeecCCc--------
Q psy18073 240 IKTWSSELSESDHIVPLHT--IISKSVISSISHQRK-SKIFATCG-----DQCQLWEHERNEPIRAFSWNVD-------- 303 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~~l~~~~-----~~i~vwd~~~~~~~~~~~~h~~-------- 303 (639)
|.+||+.+++....+.... ......+..++++++ +..+++.. ..|.+||+.+++..+.+.+|..
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999998765322111100 011235688999975 55555532 3899999998887666654321
Q ss_pred ---------------------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCC
Q psy18073 304 ---------------------SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPS 362 (639)
Q Consensus 304 ---------------------~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (639)
.+..++|+| +++.|+.+..++. ++|.+.......
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~-dg~~ly~~~~~~~-~l~~~~~~~~~~----------------------- 229 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDA-ENEWLYLSPMHST-SMYRIKSADLSN----------------------- 229 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECT-TSCEEEEEESSCS-EEEEEEHHHHTC-----------------------
T ss_pred eECCEEEEeccCCCceeceecccceeEecc-CCCEEEEEeCCCC-eEEEEEHHHhcC-----------------------
Confidence 245566666 5555555554443 334332211000
Q ss_pred CCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccc--cccCcccceeEEeeCCCCcceEEecc
Q psy18073 363 LHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVA--NLDGHKDGISCLAKHPTKLSTIISGA 440 (639)
Q Consensus 363 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~v~~sp~~~~~l~sgs 440 (639)
.......... ...++......++++++| .++++..
T Consensus 230 ------------------------------------------~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~ 266 (343)
T 2qe8_A 230 ------------------------------------------LQLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDL 266 (343)
T ss_dssp ------------------------------------------TTCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEG
T ss_pred ------------------------------------------CCCChhhhhcceEecccCCCCceEEECCCC-CEEEEcc
Confidence 0000000000 112344456789999999 8999999
Q ss_pred CCceEEEecCCccccceeeee-eccccccccccCCcccccc
Q psy18073 441 YDGEVKVWNLTSQSCVQTYQA-HDGHVRDTSTRPAVETTDL 480 (639)
Q Consensus 441 ~Dg~v~iWd~~~~~~~~~l~~-h~~~v~~v~~spdg~~~~~ 480 (639)
.++.|.+||..+|+....... +...+.+++|.|+|..+..
T Consensus 267 ~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~ 307 (343)
T 2qe8_A 267 AHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFD 307 (343)
T ss_dssp GGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEE
T ss_pred CCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEE
Confidence 999999999866654322222 1345789999999865433
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.22 E-value=3e-09 Score=106.64 Aligned_cols=252 Identities=10% Similarity=-0.032 Sum_probs=152.6
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEEecc-------C
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAH-------D 216 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~~~h-------~ 216 (639)
.+.++|..+++.+.++..-..+ .+++|||| +.++.+. .++.|.+||..+.+.+..+... .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccC
Confidence 4556677777777777644444 99999999 6776664 3678999999998888776432 1
Q ss_pred CceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC--CEEEEcC-CeeEEEeCCC
Q psy18073 217 GHVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS--KIFATCG-DQCQLWEHER 291 (639)
Q Consensus 217 ~~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~-~~i~vwd~~~ 291 (639)
.....++|+|||++|+.++. ++.|.++| .+++.... ....... +.+.|++ .+++.+. +.+.++|. +
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~----~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~ 195 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ----LLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-A 195 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE----EcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-C
Confidence 23458999999999998874 58899999 87654322 0222222 3333443 2333333 48888999 7
Q ss_pred Cceeeeee-----cCCcc-EEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCC
Q psy18073 292 NEPIRAFS-----WNVDS-LHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHP 365 (639)
Q Consensus 292 ~~~~~~~~-----~h~~~-v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (639)
++.+.... ....+ .....+.++++.+++. +.++.+.+.|+.++..... . .
T Consensus 196 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~-~-~--------------------- 251 (373)
T 2mad_H 196 GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNK-A-P--------------------- 251 (373)
T ss_pred CcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEe-e-e---------------------
Confidence 77653321 11122 2234566744444444 4688999999865422100 0 0
Q ss_pred CCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEecc-----
Q psy18073 366 FEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----- 440 (639)
Q Consensus 366 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs----- 440 (639)
+....... ....-.......++++|++ ..+..+.
T Consensus 252 ---------------------------------------~~~~~~~~-~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~ 290 (373)
T 2mad_H 252 ---------------------------------------IDALSGGR-KADTWRPGGWQQVAYLKSS-DGIYLLTSEQSA 290 (373)
T ss_pred ---------------------------------------eeecCCcc-cccceecCceEeEEECCCC-CEEEEEeccCCc
Confidence 00000000 0000011223457789998 5444432
Q ss_pred -----CCceEEEecCCccccceeeeeeccccccccccCCccccccccc
Q psy18073 441 -----YDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483 (639)
Q Consensus 441 -----~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~~~~~~ 483 (639)
.++.|.+.|+.+++.+.++.. .+....++|+|||+.+.+...
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 246899999999999999853 346899999999985555543
No 221
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.21 E-value=3.7e-11 Score=126.06 Aligned_cols=107 Identities=46% Similarity=0.795 Sum_probs=82.0
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccccccccchHHHHHHHHHHHhhcCCCCccCchhHHHHhCCcCCCCCCcchHHH
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQE 80 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~d~~e 80 (639)
|||||||+||||+++|+||.+++....+.. .....+...|+++|..|+.+.. .+.|..+++.+++.....+.|||++|
T Consensus 183 nTCYmNSvLQ~L~~~~~fr~~~~~~~~~~~-~~~~~~~~~l~~lf~~l~~~~~-~~~~~~l~~~~~~~~~~~~~QqDa~E 260 (522)
T 2f1z_A 183 ATCYMNSLLQTLFFTNQLRKAVYMMPTEGD-DSSKSVPLALQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQE 260 (522)
T ss_dssp -CTTHHHHHHHHHTCHHHHHHHHTCCCCSS-CTTTCHHHHHHHHHHHHHHCSS-CBCCTTHHHHTCCCTTTSSTTSCHHH
T ss_pred ccHHHHHHHHHHhccHHHHHHHhhccccCC-cccchHHHHHHHHHHHHhcCCC-ccCcHHHHhhcCCccCCCcccccHHH
Confidence 799999999999999999999987653322 1224688999999999987654 47788888888865457889999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccccceeee
Q psy18073 81 LCRVLFDALETQFKGSKTTGDQADLINNL 109 (639)
Q Consensus 81 ~~~~l~~~l~~~~~~~~~~~~~~~l~~~~ 109 (639)
|++.|++.|+..+++......+..++...
T Consensus 261 fl~~LLd~L~~~l~~~~~~s~i~~lF~G~ 289 (522)
T 2f1z_A 261 LCRVLLDNVENKMKGTCVEGTIPKLFRGK 289 (522)
T ss_dssp HHHHHHHHHHHHHTTSTTTTHHHHHHCEE
T ss_pred HHHHHHHHHHhhccCCccccchhhheeEE
Confidence 99999999999887654333333444433
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=1.9e-09 Score=106.44 Aligned_cols=152 Identities=10% Similarity=-0.031 Sum_probs=108.0
Q ss_pred EEECCCCCeeEEEeeC-----CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe----------cCCeEEEE
Q psy18073 179 LAKHPTKLSTIISGAY-----DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG----------IDNTIKTW 243 (639)
Q Consensus 179 l~~sp~~~~~l~sgs~-----dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s----------~Dg~i~iw 243 (639)
....|++ +.+..... ++.|.+.|..+++.+.++..-..+ . ++++|||++++.++ .++.|.+|
T Consensus 38 ~~~~pd~-~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCC-CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3456888 55555433 689999999999999998765555 4 99999999887765 36789999
Q ss_pred eCCCCCCCcccceE---EEecCCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCc
Q psy18073 244 SSELSESDHIVPLH---TIISKSVISSISHQRKSKIFATCG----DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKH 316 (639)
Q Consensus 244 d~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~ 316 (639)
|..+.+....+++. ..........++++|||+.+.+++ +.|.++|+.+++.+.++.... . ...+ |.+.+
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~-P~g~~ 190 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIF-PTAPD 190 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEE-EEETT
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceee-cCCCc
Confidence 99987653221110 000112466799999999776653 389999999999998886422 1 1223 43666
Q ss_pred EEEEEeCCCcEEEEECCC-ccc
Q psy18073 317 ILASCASDRSIILYDTRA-TVL 337 (639)
Q Consensus 317 ~l~s~s~Dg~i~iwd~~~-~~~ 337 (639)
.+++.+.||++.+.++.+ ++.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCC
T ss_pred eeEEECCCCCEEEEECCCCCeE
Confidence 777888899999999876 544
No 223
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.19 E-value=7.9e-09 Score=100.44 Aligned_cols=221 Identities=6% Similarity=-0.026 Sum_probs=153.3
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEE-EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ-TYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES 250 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~-~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~ 250 (639)
+...+.+++++++| .+.++...++.|..||.. ++... .+......+.++++.++|+++++...++.|..+|.. +..
T Consensus 60 ~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 60 PDAKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 44678999999999 777777778899999987 55432 222244678999999999988888778899999987 332
Q ss_pred CcccceEEEe-cCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeee-eecCCccEEEEEEcCCCCcEEEEEeCCCc
Q psy18073 251 DHIVPLHTII-SKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKHILASCASDRS 326 (639)
Q Consensus 251 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~ 326 (639)
. ..... ....+..+++++++.++++.. +.|..+|. +++.... ...+...+.++++++ ++++.++....+.
T Consensus 137 ~----~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~ 210 (300)
T 2qc5_A 137 Y----EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMGNK 210 (300)
T ss_dssp E----EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTTE
T ss_pred E----EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCCCE
Confidence 1 11111 234688999999999777764 38999998 5554332 223445789999999 7787777666778
Q ss_pred EEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccc
Q psy18073 327 IILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLER 406 (639)
Q Consensus 327 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (639)
|.+||. ++....
T Consensus 211 i~~~~~-~g~~~~------------------------------------------------------------------- 222 (300)
T 2qc5_A 211 IGRITT-TGEISE------------------------------------------------------------------- 222 (300)
T ss_dssp EEEECT-TCCEEE-------------------------------------------------------------------
T ss_pred EEEEcC-CCcEEE-------------------------------------------------------------------
Confidence 999987 332110
Q ss_pred cccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccce-eeeeeccccccccccCCcccc
Q psy18073 407 VFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ-TYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 407 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~-~l~~h~~~v~~v~~spdg~~~ 478 (639)
..+..+...+.+++++++| .+.++...++.|..||. +++... .+......+.+++++++|...
T Consensus 223 -------~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 223 -------YDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVW 286 (300)
T ss_dssp -------EECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEE
T ss_pred -------EECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEE
Confidence 0011234457889999999 77777777889999998 443321 122234568889999998643
No 224
>3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A
Probab=99.18 E-value=4.7e-11 Score=119.21 Aligned_cols=96 Identities=25% Similarity=0.420 Sum_probs=78.5
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccccc----cccchHHHHHHHHHHHhh-cCCCCccCchhHHHHhCCcCC--CCC
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDI----AEETSITYQLQKLFVNLQ-TSTRPAVETTDLTRSFGWESS--DAW 73 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~----~~~~~i~~~l~~lf~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~ 73 (639)
|||||||+||+|+++|+||.+++...+.... .....+...|+++|..++ .+....+.|..|++.+....+ ..+
T Consensus 17 NtCY~NsvLQ~L~~~~~~r~~~l~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~p~~~~~~l~~~~~~f~~~ 96 (348)
T 3nhe_A 17 NTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY 96 (348)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHTTGGGGTSCSSCCTTHHHHHHHHHHHHHHTTCCTTCEECCHHHHHHHHHHSGGGSSS
T ss_pred ccHHHHHHHHHHhcCHHHHHHHhcchhhHhhccCCCcccHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHhhhhhCCC
Confidence 7999999999999999999999876543322 122358899999999987 677778999999988775544 678
Q ss_pred CcchHHHHHHHHHHHHHHHhcCC
Q psy18073 74 QQHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 74 ~q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
.|||++||+..|++.|+..+...
T Consensus 97 ~QqDa~Efl~~lLd~L~~e~~~~ 119 (348)
T 3nhe_A 97 NQQDAQEFLRFLLDGLHNEVNRV 119 (348)
T ss_dssp CCBCHHHHHHHHHHHHHHHHCSC
T ss_pred CccCHHHHHHHHHHHHHHHHhhc
Confidence 89999999999999999987643
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.17 E-value=9.3e-09 Score=99.90 Aligned_cols=221 Identities=8% Similarity=0.000 Sum_probs=154.4
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEE-EEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ-TYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~-~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~ 249 (639)
.....+.+++++++| .+.++...++.|.+||.. ++... .+..+...+.++++.++|+.+++...++.|..+|.. +.
T Consensus 17 ~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 345688999999999 777877778999999987 55443 223334678999999999988887778999999987 33
Q ss_pred CCcccceEEEe-cCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceee-eeecCCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 250 SDHIVPLHTII-SKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIR-AFSWNVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 250 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~-~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
.. ..... ....+..+++++++.++++.. +.|..+|.. ++... .+......+.++++.+ ++++.++...++
T Consensus 94 ~~----~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~ 167 (300)
T 2qc5_A 94 FT----EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS-DNALWFTENQNN 167 (300)
T ss_dssp EE----EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSSEEEEETTTT
T ss_pred eE----EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC-CCCEEEEecCCC
Confidence 21 11111 235688999999999888775 389999987 55432 2333456789999999 777777766678
Q ss_pred cEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccc
Q psy18073 326 SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLE 405 (639)
Q Consensus 326 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (639)
.|..+|. +++...
T Consensus 168 ~i~~~~~-~g~~~~------------------------------------------------------------------ 180 (300)
T 2qc5_A 168 SIGRITN-TGKLEE------------------------------------------------------------------ 180 (300)
T ss_dssp EEEEECT-TCCEEE------------------------------------------------------------------
T ss_pred eEEEECC-CCcEEE------------------------------------------------------------------
Confidence 8999987 332210
Q ss_pred ccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcccccee-eeeeccccccccccCCccc
Q psy18073 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT-YQAHDGHVRDTSTRPAVET 477 (639)
Q Consensus 406 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~-l~~h~~~v~~v~~spdg~~ 477 (639)
.....+...+.+++++++| .+.++....+.|.+||. +++.... +..+...+.+++++++|..
T Consensus 181 --------~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 181 --------YPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEI 243 (300)
T ss_dssp --------EECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCE
T ss_pred --------eeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCE
Confidence 0011223457889999999 77777777788999998 5543332 2233456778889998864
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.16 E-value=1.7e-11 Score=123.21 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=77.7
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeE
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVIS 266 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 266 (639)
..+++++.||.|+.||..+|+.+..+.. +.+.+..+.+++..+++++.||.|+.||..+++..+..+... ...+.
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~---~~~~~ 84 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI---PELVQ 84 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH---HHHHT
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC---ccccc
Confidence 6899999999999999999999988876 566666666788888888999999999998887654332211 01111
Q ss_pred -EeeecCCCCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 267 -SISHQRKSKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 267 -~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
+.....++ .+++++ +.+..||..+|+.+..+..+. ...++| ++..+++++.|+.|+.||.++++.+
T Consensus 85 ~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 85 ASPCRSSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred cCceEecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEE
Confidence 11111233 334443 389999999999988877654 245677 6778888999999999999988654
No 227
>2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A
Probab=99.16 E-value=2.6e-11 Score=122.43 Aligned_cols=96 Identities=24% Similarity=0.408 Sum_probs=77.9
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccccc------cccchHHHHHHHHHHHhhcCCCCccCchhHHHHhCCcCC--CC
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDI------AEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESS--DA 72 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~------~~~~~i~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 72 (639)
|||||||+||||+++|+||.++....+.... .....+...|..++..++.+....+.|..|+..++...+ ..
T Consensus 70 NTCYmNSvLQ~L~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~i~P~~f~~~l~~~~~~f~~ 149 (396)
T 2gfo_A 70 NTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAG 149 (396)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHTTTHHHHCCTTCTTSCTTHHHHHHHHHHHHHHHSCEEEECCHHHHHHHHHHCGGGSS
T ss_pred CchhHhHHHHHhhCCHHHHHHHHcCcchhhhcccCCCCcccHHHHHHHHHHHHHHcCCCceECHHHHHHHHHHhchhhcC
Confidence 7999999999999999999999876542211 122358888999999888777778999999988775543 67
Q ss_pred CCcchHHHHHHHHHHHHHHHhcCC
Q psy18073 73 WQQHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 73 ~~q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
+.|||++||+..|++.|+..+...
T Consensus 150 ~~QqDA~EFl~~LLd~L~~el~~~ 173 (396)
T 2gfo_A 150 YSQQDSQELLLFLMDGLHEDLNKA 173 (396)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCChHHHHHHHHHHHHHHHhhh
Confidence 899999999999999999987644
No 228
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=99.14 E-value=4.4e-11 Score=119.79 Aligned_cols=96 Identities=21% Similarity=0.370 Sum_probs=76.2
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCccccccc---ccchHHHHHHHHHHHhhcCCC-CccCchhHHHHhCCcCC--CCCC
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIA---EETSITYQLQKLFVNLQTSTR-PAVETTDLTRSFGWESS--DAWQ 74 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~~---~~~~i~~~l~~lf~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~ 74 (639)
|||||||+||+|+++|+||..++......... ....+...|+.+|..++.... ..+.|..|.+.+....+ ..+.
T Consensus 11 NtCY~NSvLQ~L~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~v~p~~~~~~l~~~~~~f~~~~ 90 (355)
T 3i3t_A 11 NTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYS 90 (355)
T ss_dssp STHHHHHHHHHHHTCHHHHHHHHHTTHHHHC------CHHHHHHHHHHHHTSSCSSCCCBCCHHHHHHHHHHCGGGCSSC
T ss_pred cchHHHHHHHHHhCCHHHHHHHHhchHHHhcCCCCchhHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHhChhhCCCC
Confidence 79999999999999999999998754432221 223588999999999875543 67899999988765443 6789
Q ss_pred cchHHHHHHHHHHHHHHHhcCC
Q psy18073 75 QHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 75 q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
|||++||+..|++.|+..+...
T Consensus 91 QqDA~Efl~~LLd~L~~el~~~ 112 (355)
T 3i3t_A 91 QQDAQEFLKLLMERLHLEINRR 112 (355)
T ss_dssp CCBHHHHHHHHHHHHHHHHCCC
T ss_pred ccCHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999987644
No 229
>2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A
Probab=99.14 E-value=2.8e-11 Score=123.32 Aligned_cols=95 Identities=20% Similarity=0.336 Sum_probs=75.6
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccccc----cccchHHHHHHHHHHHhhcCCCCccCchhHHHHhCCcCC------
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDI----AEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESS------ 70 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~----~~~~~i~~~l~~lf~~~~~~~~~~~~~~~~~~~~~~~~~------ 70 (639)
|||||||+||||+++|+||.+++.+...... .....+...|+++|..++.+. ..+.|..|++.+....+
T Consensus 22 NTCYmNSvLQ~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lf~~l~~~~-~~v~P~~~~~~l~~~~~~f~~~~ 100 (404)
T 2ayn_A 22 NTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTS-SSIPPIILLQFLHMAFPQFAEKG 100 (404)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHTCCCCC------CHHHHHHHHHHHHHHHHHHHC-SEECCHHHHHHHHHHCGGGGCBC
T ss_pred cccHHHHHHHHHHcCHHHHHHHHhcccccccCCCCCcccHHHHHHHHHHHHHhcCC-CcCChHHHHHHHHHhCchhhccc
Confidence 7999999999999999999999988654211 122459999999999998654 67899998876543221
Q ss_pred --CCCCcchHHHHHHHHHHHHHHHhcCC
Q psy18073 71 --DAWQQHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 71 --~~~~q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
..+.|||++||+..|++.|+..++..
T Consensus 101 ~~~~~~QqDA~Efl~~lLd~L~~~~~~~ 128 (404)
T 2ayn_A 101 EQGQYLQQDANECWIQMMRVLQQKLEAI 128 (404)
T ss_dssp TTSCBCCCCHHHHHHHHHHHHHTTSCCC
T ss_pred cCCCccccCHHHHHHHHHHHHHHHhccc
Confidence 36899999999999999999887643
No 230
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.13 E-value=6.2e-09 Score=101.21 Aligned_cols=159 Identities=11% Similarity=0.082 Sum_probs=106.5
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec----cCCceEEEEEcCCCCEEEEEecC---------C
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA----HDGHVRDVCFLPDGSQFLSVGID---------N 238 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~----h~~~V~~v~~sp~~~~l~s~s~D---------g 238 (639)
+...+.+++++|+| +++++ . ++.|.+||..+++....... ....++.++++|+|+++++...+ .
T Consensus 52 ~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 52 MDAPVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp CSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred CCCceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 45679999999999 65554 3 56899999988765433321 12458899999999977765332 3
Q ss_pred eEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeC--CCCce-----eeeeecCCccEEEE
Q psy18073 239 TIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---DQCQLWEH--ERNEP-----IRAFSWNVDSLHHV 308 (639)
Q Consensus 239 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~--~~~~~-----~~~~~~h~~~v~~v 308 (639)
.-.||.+...... ..........+.++++|+++.+..+. +.|.+||+ .++.. ...+..+.+...++
T Consensus 129 ~~~l~~~d~~g~~----~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~ 204 (297)
T 3g4e_A 129 QGALYSLFPDHHV----KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGM 204 (297)
T ss_dssp CEEEEEECTTSCE----EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEE
T ss_pred CcEEEEEECCCCE----EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCee
Confidence 3455655432221 11122234568899999998664443 38999987 45543 22233344678899
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
++++ ++++.++....+.|..||..+++.+
T Consensus 205 ~~d~-~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 205 CIDA-EGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEBT-TSCEEEEEETTTEEEEECTTTCCEE
T ss_pred EECC-CCCEEEEEcCCCEEEEEcCCCceEE
Confidence 9999 7888888777888999998876543
No 231
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.13 E-value=1.3e-09 Score=120.43 Aligned_cols=195 Identities=10% Similarity=-0.003 Sum_probs=121.5
Q ss_pred cccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCc----------
Q psy18073 128 IHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE---------- 197 (639)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~---------- 197 (639)
+....+.++.....+...+.. .....+.+||+.+++.+.. ..+...+..++|+|| . .|+.++.|+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G-~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGG-SDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETT-CSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-S-EEEEEECCCC--------CC
T ss_pred EEeEEECCCCCEEEEEEcCCC-CceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-C-EEEEEEecCcccccccccCC
Confidence 334455666665555432211 1113588899988876542 112222368999999 3 4555555443
Q ss_pred ----EEEEeCCCCce--EEEEe--ccCCceEEEEEcCCCCEEEEEecCC-----eEEEEeCCCC--CCCcccceEEEecC
Q psy18073 198 ----VKVWNLTSQSC--VQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDN-----TIKTWSSELS--ESDHIVPLHTIISK 262 (639)
Q Consensus 198 ----i~vWd~~~~~~--~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg-----~i~iwd~~~~--~~~~~~~~~~~~~~ 262 (639)
|++|++.++.. ...+. .|...+.++.|+|||++|+..+.++ .|.+||+.++ ... .......
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~----~~l~~~~ 316 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV----TALIPDL 316 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC----EEEECSS
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc----EEecCCC
Confidence 99999987652 23333 3334688999999999999887654 8999999865 201 1111222
Q ss_pred CeeEEeeecCCCCEEEEcCC------eeEEEeCCCC--ceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 263 SVISSISHQRKSKIFATCGD------QCQLWEHERN--EPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 263 ~~v~~~~~~~~~~~l~~~~~------~i~vwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
...... ++|++..++..++ .|.+||+.++ +....+..+...+.++.++ ++.++++...|+..+||.+.
T Consensus 317 ~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 317 KAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 233333 3477776665542 5999999875 3444445555667778877 56789999999998888653
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.05 E-value=1.4e-08 Score=102.22 Aligned_cols=149 Identities=10% Similarity=-0.030 Sum_probs=104.2
Q ss_pred CCCCeeEEEeeCC----CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe----------cCCeEEEEeCCCC
Q psy18073 183 PTKLSTIISGAYD----GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG----------IDNTIKTWSSELS 248 (639)
Q Consensus 183 p~~~~~l~sgs~d----g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s----------~Dg~i~iwd~~~~ 248 (639)
|++...+++...+ +.|.+.|..+++.+.++..-..+ .++++|||++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4552344444433 79999999999999998765555 899999999888776 4779999999987
Q ss_pred CCCcccceE---EEecCCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 249 ESDHIVPLH---TIISKSVISSISHQRKSKIFATCG----DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 249 ~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
+....+++. ..........+.++|||+++.+++ +.|.+.|+.+++.+..+..... ....|.+...+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEE
Confidence 653222110 000013456789999999887754 3899999999998888764221 23344345677777
Q ss_pred eCCCcEEEEECCCccc
Q psy18073 322 ASDRSIILYDTRATVL 337 (639)
Q Consensus 322 s~Dg~i~iwd~~~~~~ 337 (639)
+.||++.+.+..+++.
T Consensus 236 ~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 236 CRDGSLARVDFADGET 251 (426)
T ss_dssp ETTSSEEEEECCTTCC
T ss_pred cCCCCEEEEECCCCcE
Confidence 8888888888855543
No 233
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.05 E-value=6.8e-09 Score=105.55 Aligned_cols=176 Identities=11% Similarity=0.055 Sum_probs=114.4
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCC--cEEEEeCCCCceEEEE----eccCCceEEEEEcCC
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG--EVKVWNLTSQSCVQTY----QAHDGHVRDVCFLPD 227 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg--~i~vWd~~~~~~~~~~----~~h~~~V~~v~~sp~ 227 (639)
.++.|+..++........ ..... ++|+|++ ..|+++..++ .|.+|+..++.....+ ..+...+.+++++|+
T Consensus 153 ~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~ 229 (409)
T 3hrp_A 153 RVRLISVDDNKVTTVHPG-FKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET 229 (409)
T ss_dssp EEEEEETTTTEEEEEEET-CCBCB-CEECTTS-SEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT
T ss_pred cEEEEECCCCEEEEeecc-CCCCc-eeEecCC-CcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC
Confidence 456666665554443333 22333 9999999 7888777765 7999998766554444 224567889999995
Q ss_pred CCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCee---EEeeecCC-CCEEEEcCC--eeEEEeCCCCceeeeeecC
Q psy18073 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVI---SSISHQRK-SKIFATCGD--QCQLWEHERNEPIRAFSWN 301 (639)
Q Consensus 228 ~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~-~~~l~~~~~--~i~vwd~~~~~~~~~~~~h 301 (639)
+..|+.+..++.|..||..++... ............. ..++++|+ +.++++... .|..|+.... +..+.++
T Consensus 230 ~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~ 306 (409)
T 3hrp_A 230 EEWLYFVDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGS 306 (409)
T ss_dssp SSEEEEECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEEC
T ss_pred CCeEEEEECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeC
Confidence 555555777899999999865421 1000001111111 28999995 555555443 8889987643 3344443
Q ss_pred C---------------ccEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCcc
Q psy18073 302 V---------------DSLHHVQFNPIDKHILASCA-SDRSIILYDTRATV 336 (639)
Q Consensus 302 ~---------------~~v~~v~~sp~~~~~l~s~s-~Dg~i~iwd~~~~~ 336 (639)
. ....+++++| +++++++-+ .++.|+.||+.++.
T Consensus 307 ~~~~g~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 307 ATQKTVQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp TTCCSCBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTE
T ss_pred CCCCCcCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCE
Confidence 2 3478999999 788888877 88999999976664
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=3.8e-09 Score=106.34 Aligned_cols=98 Identities=10% Similarity=-0.018 Sum_probs=74.4
Q ss_pred hhhhhhhhhccccccccccccccEEEEEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEEecc-------
Q psy18073 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAH------- 215 (639)
Q Consensus 153 ~~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~~~h------- 215 (639)
+.+.+.|..+.+.+.++..-..+ .++++||| ++|..+. .++.|.++|..+++.+..+.-.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDg-k~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDG-SFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCC-CEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 35666777778888777654455 89999999 6665554 4679999999999998887531
Q ss_pred CCceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcc
Q psy18073 216 DGHVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESDHI 253 (639)
Q Consensus 216 ~~~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~~~ 253 (639)
......++|+|||++++.+.. +++|.+.|+.+.+....
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~ 215 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRM 215 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEE
Confidence 223467899999999998874 58999999998765433
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.03 E-value=1.5e-09 Score=107.46 Aligned_cols=90 Identities=7% Similarity=-0.114 Sum_probs=70.3
Q ss_pred hhhhhhhccccccccccccccEEEEEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEEecc-------CC
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAH-------DG 217 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~~~h-------~~ 217 (639)
+.+.|..+++.+.++..-..+ .++++||| +++..+. .++.|.+||+.+++.+.++..+ ..
T Consensus 48 vsvID~~t~~v~~~i~vG~~P--~i~~spDg-~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 48 NWVSCAGCGVTLGHSLGAFLS--LAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEETTTTEEEEEEEECTTC--EEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred EEEEECCCCeEEEEEeCCCCC--ceEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 446677788888888655556 79999999 6666664 4789999999999999998643 12
Q ss_pred ceEEEEEcCCCCEEEEEec--CCeEEE--EeCCC
Q psy18073 218 HVRDVCFLPDGSQFLSVGI--DNTIKT--WSSEL 247 (639)
Q Consensus 218 ~V~~v~~sp~~~~l~s~s~--Dg~i~i--wd~~~ 247 (639)
....++++|||++++.+.. +..|.+ +|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 3568999999999998874 467888 99865
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.01 E-value=6.7e-08 Score=96.00 Aligned_cols=152 Identities=10% Similarity=0.102 Sum_probs=104.7
Q ss_pred EEC--CCCCeeEEEeeCCCcEEEEeCCCC----ceEEEEe------c-cCCceEEEEEcCCCCEEEEEecC------CeE
Q psy18073 180 AKH--PTKLSTIISGAYDGEVKVWNLTSQ----SCVQTYQ------A-HDGHVRDVCFLPDGSQFLSVGID------NTI 240 (639)
Q Consensus 180 ~~s--p~~~~~l~sgs~dg~i~vWd~~~~----~~~~~~~------~-h~~~V~~v~~sp~~~~l~s~s~D------g~i 240 (639)
+++ +++..++++|..+++|.|.|+.+. +.+.++. . -...-..+..+|+| .++++..+ |.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 777567778888999999999755 5666663 1 11245667889999 77777666 789
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---------------------CeeEEEeCCCCceeeeee
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---------------------DQCQLWEHERNEPIRAFS 299 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------------------~~i~vwd~~~~~~~~~~~ 299 (639)
.+.|..+.+.....+... .....-+.+.|+|+++.+++.. +.|.+||+.+++.+.++.
T Consensus 167 ~vlD~~T~~v~~~~~~~~-~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDR-GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp EEECTTTCCEEEECCSBC-TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCeEEEEEccCC-CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 999999877543322110 0112344688899999988883 499999999998888876
Q ss_pred cC-C-ccEEEEEE--cCCCCcEEEEEe------CCCcEEEEECCC
Q psy18073 300 WN-V-DSLHHVQF--NPIDKHILASCA------SDRSIILYDTRA 334 (639)
Q Consensus 300 ~h-~-~~v~~v~~--sp~~~~~l~s~s------~Dg~i~iwd~~~ 334 (639)
.. . .....+.| +| +++++..++ .+++|.+|....
T Consensus 246 vg~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 246 LGEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp SCTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred cCCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecC
Confidence 53 1 23445655 99 666655555 567888887643
No 237
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=99.00 E-value=7.1e-10 Score=121.47 Aligned_cols=96 Identities=23% Similarity=0.319 Sum_probs=77.2
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccc----cccccchHHHHHHHHHHHhhcC--------------------CCCcc
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYEN----DIAEETSITYQLQKLFVNLQTS--------------------TRPAV 56 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~----~~~~~~~i~~~l~~lf~~~~~~--------------------~~~~~ 56 (639)
|||||||+||+|+++|+||..++...++. .......+...|+++|..++.. ....+
T Consensus 352 NTCYmNSvLQ~L~~~p~fr~~ll~~~~~~~~~~~~~~~~~l~~~l~~L~~~L~s~~~s~~~~~~~~~~~~~~~~~~~~~i 431 (854)
T 3ihp_A 352 NSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPVPESGDGERVPEQKEVQDGI 431 (854)
T ss_dssp SCHHHHHHHHHHTTSHHHHHHHTTTHHHHHHHCCSCGGGCHHHHHHHHHHHHHSCC---------------------CCB
T ss_pred CceehhHHHHHHhCcHHHHHHHHhhhhhhhccccCCccccHHHHHHHHHHHHhccccccccccccccccccccccCCCcc
Confidence 79999999999999999999998654321 2233346999999999988743 34578
Q ss_pred CchhHHHHhCCcCC--CCCCcchHHHHHHHHHHHHHHHhcCC
Q psy18073 57 ETTDLTRSFGWESS--DAWQQHDIQELCRVLFDALETQFKGS 96 (639)
Q Consensus 57 ~~~~~~~~~~~~~~--~~~~q~d~~e~~~~l~~~l~~~~~~~ 96 (639)
.|..|++.+..... ..+.|||++||+..|++.|+..++..
T Consensus 432 sP~~f~~~l~~~~~~F~~~~QQDA~EFl~~LLd~L~~el~~~ 473 (854)
T 3ihp_A 432 APRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVERNCRSS 473 (854)
T ss_dssp CCHHHHHHHTTTCTTTTSSSCCBHHHHHHHHHHHHHHTCTTS
T ss_pred ChHHHHHHHhhhccccccccccCHHHHHHHHHHHHHHHhccc
Confidence 99999998887654 67899999999999999999998653
No 238
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.91 E-value=2.3e-08 Score=109.49 Aligned_cols=195 Identities=11% Similarity=0.066 Sum_probs=117.9
Q ss_pred ccccccCCCCCCCCCCCCchhHHHhhhhhhhhhhhccccccccccccccE--EEEEECCCCCeeEEEeeCCCc-------
Q psy18073 127 SIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGI--SCLAKHPTKLSTIISGAYDGE------- 197 (639)
Q Consensus 127 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l~~H~~~V--~~l~~sp~~~~~l~sgs~dg~------- 197 (639)
.+..+.++++.....+...... .....++++|+.+++.+.. +...+ ..++|+ || +.|+.++.|..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G-~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAG-SDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GN-EGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSS-CCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TT-TEEEEEESSCCC------
T ss_pred EEEEEEECCCCCEEEEEEecCC-CceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CC-CEEEEEEecCcccccccc
Confidence 3444456666665554221100 1123678899988876542 33333 678999 99 77887777743
Q ss_pred ------EEEEeCCCCce--EEEE--ec-cCCceEEEEEcCCCCEEEEEec----CCeEEEEeCCCCCCCcccceEEEe-c
Q psy18073 198 ------VKVWNLTSQSC--VQTY--QA-HDGHVRDVCFLPDGSQFLSVGI----DNTIKTWSSELSESDHIVPLHTII-S 261 (639)
Q Consensus 198 ------i~vWd~~~~~~--~~~~--~~-h~~~V~~v~~sp~~~~l~s~s~----Dg~i~iwd~~~~~~~~~~~~~~~~-~ 261 (639)
|++|++.++.. ...+ .. |...+.++.|+|||++|+..+. +..|.+||+.++... ...+. .
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~----~~~l~~~ 279 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP----LLTVQGD 279 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC----CEEEECS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc----eEEEeCC
Confidence 99999987642 2223 33 5556789999999998865443 258999999875422 22222 2
Q ss_pred CCeeEEeeecCCCCEE-EEcC-----CeeEEEeCCCCce--eeeeecCCccEEEEEEcCCCCcEEE-EEeCCC--cEEEE
Q psy18073 262 KSVISSISHQRKSKIF-ATCG-----DQCQLWEHERNEP--IRAFSWNVDSLHHVQFNPIDKHILA-SCASDR--SIILY 330 (639)
Q Consensus 262 ~~~v~~~~~~~~~~~l-~~~~-----~~i~vwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~~l~-s~s~Dg--~i~iw 330 (639)
....... +++++..+ +.+. ..|..+|+.++.. ...+..|...+. .|++ +++.|+ +...+| .|++|
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~-~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS-GSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE-ETTEEEEEEEETTEEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE-ECCEEEEEEEECCeeEEEEE
Confidence 2233333 45554443 3332 1688899988764 355666666665 8888 455554 444555 68888
Q ss_pred ECCCc
Q psy18073 331 DTRAT 335 (639)
Q Consensus 331 d~~~~ 335 (639)
|+..+
T Consensus 356 d~~g~ 360 (693)
T 3iuj_A 356 DYEGK 360 (693)
T ss_dssp CTTSC
T ss_pred ECCCC
Confidence 87643
No 239
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=2.5e-07 Score=91.00 Aligned_cols=149 Identities=12% Similarity=0.037 Sum_probs=98.8
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec----cCCceEEEEEcCCCCEEEEEecC------CeEEE
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA----HDGHVRDVCFLPDGSQFLSVGID------NTIKT 242 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~----h~~~V~~v~~sp~~~~l~s~s~D------g~i~i 242 (639)
...|.+++|+|+| +++++. .+ .|.+||..+++....... ....+.+++++|+|+++++...+ +.|..
T Consensus 89 ~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 89 PFMGSALAKISDS-KQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp SSCEEEEEEEETT-EEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred CCcceEEEEeCCC-eEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 4679999999999 776654 44 499999988875433221 12458999999999977765432 44555
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeCC--CC-ce-----eeeeecCCccEEEEEEc
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG---DQCQLWEHE--RN-EP-----IRAFSWNVDSLHHVQFN 311 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~--~~-~~-----~~~~~~h~~~v~~v~~s 311 (639)
+| +++ . ............++++|+++.+..++ +.|.+||+. ++ .. ...+......+.+++++
T Consensus 166 ~~--~g~-~----~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d 238 (326)
T 2ghs_A 166 VA--KGK-V----TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD 238 (326)
T ss_dssp EE--TTE-E----EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC
T ss_pred Ee--CCc-E----EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC
Confidence 55 322 1 11112223567899999998654443 389999986 55 32 22222344567889999
Q ss_pred CCCCcEEEEEeCCCcEEEEEC
Q psy18073 312 PIDKHILASCASDRSIILYDT 332 (639)
Q Consensus 312 p~~~~~l~s~s~Dg~i~iwd~ 332 (639)
+ ++++.++...++.|..||.
T Consensus 239 ~-~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 239 A-EGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp T-TSCEEEEEETTTEEEEECT
T ss_pred C-CCCEEEEEeCCCEEEEECC
Confidence 9 7787777666788999987
No 240
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=98.88 E-value=8.1e-10 Score=104.89 Aligned_cols=89 Identities=18% Similarity=0.193 Sum_probs=63.0
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCccccccccc-chHHHHH-HHHHHHhhcCCCCccCchhHH-------HHhCCcCCC
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQL-QKLFVNLQTSTRPAVETTDLT-------RSFGWESSD 71 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~~~~~-~~i~~~l-~~lf~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 71 (639)
|||||||+|||||..|+++.++..+.......+. ..+...| +.+|..|-. ..+.|..++ ++|++....
T Consensus 17 NTCYLNSTLq~Lfsipel~d~Ll~~~~~~~~~~~~~~l~~~L~r~i~~~Lrk---~~~~P~~~l~~LR~~~pQfae~~G~ 93 (374)
T 2vhf_A 17 NSCYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRI---YGYVCATKIMKLRKILEKVEAASGF 93 (374)
T ss_dssp SCHHHHHHHHHHHSSBGGGHHHHHCCCCTTSCTTHHHHHHHHHHTTHHHHHH---TSEECHHHHHHHHHHHHHHC-----
T ss_pred cCcHHHHHHHHHHhchHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHHHHhh---cCCCcHHHHHHHHHHhHHHhcccCC
Confidence 7999999999999999999999988655433111 2488888 788888865 345555544 567755335
Q ss_pred CCCcchHHHHHHHHHHHHHHH
Q psy18073 72 AWQQHDIQELCRVLFDALETQ 92 (639)
Q Consensus 72 ~~~q~d~~e~~~~l~~~l~~~ 92 (639)
.+.|||++||+.+|+..+...
T Consensus 94 ~~~QQDaEE~~t~Ll~~L~~~ 114 (374)
T 2vhf_A 94 TSEEKDPEEFLNILFHHILRV 114 (374)
T ss_dssp ---CCCHHHHHHHHHTTTTCC
T ss_pred CccccCHHHHHHHHHHHHhhc
Confidence 799999999999999887655
No 241
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=1.9e-08 Score=99.99 Aligned_cols=163 Identities=6% Similarity=-0.020 Sum_probs=108.8
Q ss_pred cccccEEEEEECCCCCeeEEEeeC-----CCcEEEEeCCCCceEEEEecc------CCceEEEEEcCCC-CEEEEEe---
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAY-----DGEVKVWNLTSQSCVQTYQAH------DGHVRDVCFLPDG-SQFLSVG--- 235 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~-----dg~i~vWd~~~~~~~~~~~~h------~~~V~~v~~sp~~-~~l~s~s--- 235 (639)
+|-..+.+++++++| +++++-.. ++.|.+||+.+++.+..+..+ ...+..++++|++ ..+++.+
T Consensus 64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 566789999999998 77776543 579999999999877776532 2456899999864 4456655
Q ss_pred cCCeEEEEeCCCCCCCcccce---------------EEEe----------cCCeeEEeeecCCCCEEEEcCC-eeEEEeC
Q psy18073 236 IDNTIKTWSSELSESDHIVPL---------------HTII----------SKSVISSISHQRKSKIFATCGD-QCQLWEH 289 (639)
Q Consensus 236 ~Dg~i~iwd~~~~~~~~~~~~---------------~~~~----------~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~ 289 (639)
.++.|.+||+.+++....... ..+. ....+..++++|++..+..+.. .-++|.+
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~ 222 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRI 222 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEE
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEE
Confidence 688999999986543221100 0000 0123678999999987766653 2244443
Q ss_pred CCC-----c-----eee--eeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCc
Q psy18073 290 ERN-----E-----PIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT 335 (639)
Q Consensus 290 ~~~-----~-----~~~--~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~ 335 (639)
... . ... ...++.+...++++++ +++++++...++.|.+||..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 223 KSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp EHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTT
T ss_pred EHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCC
Confidence 211 1 011 1223445567799999 7899999989999999998444
No 242
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=5.5e-07 Score=90.07 Aligned_cols=150 Identities=9% Similarity=-0.074 Sum_probs=105.3
Q ss_pred EECCCCCeeEEEeeC--CC---cEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe----------cCCeEEEEe
Q psy18073 180 AKHPTKLSTIISGAY--DG---EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG----------IDNTIKTWS 244 (639)
Q Consensus 180 ~~sp~~~~~l~sgs~--dg---~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s----------~Dg~i~iwd 244 (639)
...|++ +++..... .. +|.++|..+++.+..+.....+ .++++|||++++.+. .++.|.+||
T Consensus 27 ~~~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADG-RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCC-CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 345677 55555432 33 8899999999998888754444 999999999998886 368899999
Q ss_pred CCCCCCCcccceE---EEecCCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCceeee-eecCCccEEEEEEcCCCCc
Q psy18073 245 SELSESDHIVPLH---TIISKSVISSISHQRKSKIFATCG----DQCQLWEHERNEPIRA-FSWNVDSLHHVQFNPIDKH 316 (639)
Q Consensus 245 ~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~ 316 (639)
..+.+....++.. ..........++++|||+++.+++ +.|.++| .+++.+.. +... + ++.+.|.+.+
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~ 178 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPS 178 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCc
Confidence 9876543222211 000012345789999999888764 2799999 99988777 5432 1 2455564566
Q ss_pred EEEEEeCCCcEEEEECCCcccc
Q psy18073 317 ILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 317 ~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
.+++.+.||.+.++|. +++..
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEE
Confidence 7788889999999999 76543
No 243
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=5.8e-08 Score=96.12 Aligned_cols=139 Identities=10% Similarity=-0.114 Sum_probs=96.7
Q ss_pred eeEEEeeCCC----cEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe----------cCCeEEEEeCCCCCCCc
Q psy18073 187 STIISGAYDG----EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG----------IDNTIKTWSSELSESDH 252 (639)
Q Consensus 187 ~~l~sgs~dg----~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s----------~Dg~i~iwd~~~~~~~~ 252 (639)
...++-..++ +|.+.|..+++.+.++..-..+ .+.++||+++++.+. .+++|.+||+.+.+...
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 4555555555 8889999999999999765566 799999999998886 47899999999877642
Q ss_pred ccceEE---EecCCeeEEeeecCCCCEEEEcC----CeeEE--EeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 253 IVPLHT---IISKSVISSISHQRKSKIFATCG----DQCQL--WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 253 ~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~----~~i~v--wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
.+++.. .........++++|||+++.++. +.+.+ +|..+ +..+... +. +.+.|++...+++.+.
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSC 183 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcC
Confidence 222110 00013456899999999888764 26888 99877 4444321 11 2234535566777788
Q ss_pred CCcEEEEECCC
Q psy18073 324 DRSIILYDTRA 334 (639)
Q Consensus 324 Dg~i~iwd~~~ 334 (639)
||++.+.|+.+
T Consensus 184 dg~~~~vd~~~ 194 (368)
T 1mda_H 184 PASLAASDLAA 194 (368)
T ss_dssp TTSCEEEECCS
T ss_pred CCCEEEEECcc
Confidence 99998899876
No 244
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=98.80 E-value=5.2e-09 Score=108.72 Aligned_cols=94 Identities=16% Similarity=0.294 Sum_probs=66.7
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCccccc---ccccchHHHHHHHHHHHhhcCCCC---------ccCchhHHHHhC--
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYEND---IAEETSITYQLQKLFVNLQTSTRP---------AVETTDLTRSFG-- 66 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~~---~~~~~~i~~~l~~lf~~~~~~~~~---------~~~~~~~~~~~~-- 66 (639)
|||||||+||+|+++|+||..++...+... ..+...+...|.++|..++..... ...+..+...+.
T Consensus 149 NTCYmNSvLQ~L~~~p~fr~~~l~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 228 (476)
T 3mhs_A 149 STCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFIYLLTCA 228 (476)
T ss_dssp STHHHHHHHHHHHTCHHHHHHHHTTHHHHHCSSCCTTTCHHHHHHHHHHHHHSCCCC--------CCCSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCHHHHHHHHhcchhhhccCCCcccchHHHHHHHHHHHhhcccccccccccccccCcchHHHHHHHH
Confidence 799999999999999999999986544221 122345888899999888753321 344444333221
Q ss_pred -CcC--CCCCCcchHHHHHHHHHHHHHHHhc
Q psy18073 67 -WES--SDAWQQHDIQELCRVLFDALETQFK 94 (639)
Q Consensus 67 -~~~--~~~~~q~d~~e~~~~l~~~l~~~~~ 94 (639)
... ...+.|||++||+..|++.|+..+.
T Consensus 229 ~~~~~~f~~~~QqDA~EFl~~LLd~L~~~~~ 259 (476)
T 3mhs_A 229 WKINQNLAGYSQQDAHEFWQFIINQIHQSYV 259 (476)
T ss_dssp HHHCGGGSSSSCEEHHHHHHHHHHHHHHHHH
T ss_pred HHhccccCCCCCcCHHHHHHHHHHHHHHHHh
Confidence 111 1678999999999999999988764
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.79 E-value=2.4e-06 Score=81.23 Aligned_cols=218 Identities=9% Similarity=0.000 Sum_probs=138.9
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
..+..++|+|++..++++-..++.|.+++..++.....+.........++++|++..| ++-...+.|.++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~- 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR- 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-
Confidence 4578999999763666677778899999987665443333333567899999975555 45556789999998743211
Q ss_pred ccceEEEe-cCCeeEEeeecCC-CCEEEEcC----CeeEEEeCCCCceeeee-ecCCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 253 IVPLHTII-SKSVISSISHQRK-SKIFATCG----DQCQLWEHERNEPIRAF-SWNVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 253 ~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~----~~i~vwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
.... .......++++|+ +.++++.. +.|..++++... ...+ ........+++++|+++.+.++-...+
T Consensus 115 ----~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 115 ----VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp ----EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ----EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence 1111 1246788999995 44444442 267777776433 2332 233346789999994455666666678
Q ss_pred cEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccc
Q psy18073 326 SIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLE 405 (639)
Q Consensus 326 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (639)
.|.++|........
T Consensus 190 ~I~~~~~~g~~~~~------------------------------------------------------------------ 203 (267)
T 1npe_A 190 RAECLNPAQPGRRK------------------------------------------------------------------ 203 (267)
T ss_dssp EEEEEETTEEEEEE------------------------------------------------------------------
T ss_pred EEEEEecCCCceEE------------------------------------------------------------------
Confidence 89999876421100
Q ss_pred ccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeec-cccccccccCCc
Q psy18073 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-GHVRDTSTRPAV 475 (639)
Q Consensus 406 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~-~~v~~v~~spdg 475 (639)
...+ ......++.. .+ .++++....+.|.++|..+|+.+.++.... .....+++.|++
T Consensus 204 ---------~~~~-~~~P~gi~~d-~~-~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 204 ---------VLEG-LQYPFAVTSY-GK-NLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ---------EEEC-CCSEEEEEEE-TT-EEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred ---------EecC-CCCceEEEEe-CC-EEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 0000 0112345554 34 566666667899999999999888886433 246788888876
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.78 E-value=2.8e-07 Score=94.97 Aligned_cols=233 Identities=11% Similarity=0.068 Sum_probs=150.5
Q ss_pred CCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc-CCceEEEEE-c-CCCCEEEEEe------------------cCCeEE
Q psy18073 183 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-DGHVRDVCF-L-PDGSQFLSVG------------------IDNTIK 241 (639)
Q Consensus 183 p~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-~~~V~~v~~-s-p~~~~l~s~s------------------~Dg~i~ 241 (639)
+||..++++...++.|.+-|+.+.++...+.-- ......+++ + |++++++.++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 478444455556778999999999988855422 245788998 5 9999998885 346899
Q ss_pred EEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC---------------------------------------
Q psy18073 242 TWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--------------------------------------- 282 (639)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------------------------- 282 (639)
+.|..+.+.. ......+....++.+|+|+++.+++.
T Consensus 179 vID~~t~~v~-----~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 179 AVDADKWEVA-----WQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEETTTTEEE-----EEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEECCCCeEE-----EEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 9999875442 22222234566778888887776651
Q ss_pred -eeEEEeCCC--Cce-eeeeecCCccEEEEEEcCCCCc-EEEEEeCCCcEEEEECCCccccCCccccccccccccccccC
Q psy18073 283 -QCQLWEHER--NEP-IRAFSWNVDSLHHVQFNPIDKH-ILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPR 357 (639)
Q Consensus 283 -~i~vwd~~~--~~~-~~~~~~h~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (639)
.|.|.|.++ ++. +..+... ....++.++| ||+ .++++..+.+|.++|+.+.+.... ....
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~--~~l~----------- 318 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFY--ENAD----------- 318 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHH--SCCC-----------
T ss_pred CcEEEEeCcccCCceeEEEEecC-CCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccc--cccC-----------
Confidence 256667666 444 4444332 3457799999 565 555556788999999986432100 0000
Q ss_pred CCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEE
Q psy18073 358 NIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTII 437 (639)
Q Consensus 358 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~ 437 (639)
.....+.... -......++|+|+| ...+
T Consensus 319 --------------------------------------------------~~~~v~~~v~-vG~gP~h~aF~~dG-~aY~ 346 (595)
T 1fwx_A 319 --------------------------------------------------PRSAVVAEPE-LGLGPLHTAFDGRG-NAYT 346 (595)
T ss_dssp --------------------------------------------------GGGGEEECCB-CCSCEEEEEECTTS-EEEE
T ss_pred --------------------------------------------------cccceEEEcC-CCCCcceEEECCCC-eEEE
Confidence 0000001111 12346789999999 8777
Q ss_pred eccCCceEEEecCCc----------cccceeee-----eeccccccccccCCccccccccccccc
Q psy18073 438 SGAYDGEVKVWNLTS----------QSCVQTYQ-----AHDGHVRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 438 sgs~Dg~v~iWd~~~----------~~~~~~l~-----~h~~~v~~v~~spdg~~~~~~~~~~~~ 487 (639)
+.-.|+.|.+||+.+ .+.+.++. +|......+..+|||+.+.....+.-|
T Consensus 347 t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 347 SLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred EEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 888899999999987 34555554 445555778899999987666555434
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.76 E-value=1.5e-06 Score=81.14 Aligned_cols=216 Identities=10% Similarity=0.008 Sum_probs=138.6
Q ss_pred ccccccccccc--cEEEEEECCCCCeeEEEeeC--CCcEEEEeCCCCceEEEEeccCC-ceEEEEEcCCCCEE-EEEecC
Q psy18073 164 PFVANLDGHKD--GISCLAKHPTKLSTIISGAY--DGEVKVWNLTSQSCVQTYQAHDG-HVRDVCFLPDGSQF-LSVGID 237 (639)
Q Consensus 164 ~~~~~l~~H~~--~V~~l~~sp~~~~~l~sgs~--dg~i~vWd~~~~~~~~~~~~h~~-~V~~v~~sp~~~~l-~s~s~D 237 (639)
+.+.++. |.. ....++|+|++ .+.++.+. ++.|++.|+.+++.+..+.-... ....+++. ++.| ++.-.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 3445553 543 46899999998 77776654 67999999999999988753222 22345554 4444 455568
Q ss_pred CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCC-----ccEEEEEE
Q psy18073 238 NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNV-----DSLHHVQF 310 (639)
Q Consensus 238 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~-----~~v~~v~~ 310 (639)
+.+.++|..+.+.... +... .-....+++|+..+.++.+ .+.++|..+.+.+..+.-.. ..++.+.|
T Consensus 86 ~~v~viD~~t~~v~~~-----i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~ 159 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKN-----FTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY 159 (266)
T ss_dssp SEEEEEETTTTEEEEE-----EECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred CEEEEEECCCCcEEEE-----EECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE
Confidence 9999999998665422 2221 0112334556654444443 99999999988887775322 13667888
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 390 (639)
. ++.+.+....++.|.+.|..+++.+..+......
T Consensus 160 ~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~------------------------------------------- 194 (266)
T 2iwa_A 160 I--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLR------------------------------------------- 194 (266)
T ss_dssp E--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHH-------------------------------------------
T ss_pred E--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcc-------------------------------------------
Confidence 7 4666666667889999999998776433210000
Q ss_pred cCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCcc
Q psy18073 391 GPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453 (639)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~ 453 (639)
......-..-....+.|+|+|++..+++|+...+.|.+-++...
T Consensus 195 -------------------~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 195 -------------------KKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -------------------HHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -------------------cccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 00000000112356899999998678899989999998887654
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.76 E-value=6.6e-08 Score=105.09 Aligned_cols=254 Identities=10% Similarity=0.021 Sum_probs=135.1
Q ss_pred CCcEEEEeCCCCceEEEEecc--C-----------------------------CceEEEEEcCCCCEEEEEecCCe----
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAH--D-----------------------------GHVRDVCFLPDGSQFLSVGIDNT---- 239 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h--~-----------------------------~~V~~v~~sp~~~~l~s~s~Dg~---- 239 (639)
+|.|+.||..+|+.+..+..- . .....++++|++..++.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 789999999999998877521 0 01125788898889999887764
Q ss_pred ---------------EEEEeCCCCCCCcccceEEE-----ecCCeeEEeeecCCCC---EEEEcCC--eeEEEeCCCCce
Q psy18073 240 ---------------IKTWSSELSESDHIVPLHTI-----ISKSVISSISHQRKSK---IFATCGD--QCQLWEHERNEP 294 (639)
Q Consensus 240 ---------------i~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~~--~i~vwd~~~~~~ 294 (639)
|..||..+++..+....... .....+.......+|. .++.++. .++++|.++|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 99999999887543322100 0011111112222454 5666663 999999999998
Q ss_pred eeeeecCC-c--------------------------------------cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCc
Q psy18073 295 IRAFSWNV-D--------------------------------------SLHHVQFNPIDKHILASCASDRSIILYDTRAT 335 (639)
Q Consensus 295 ~~~~~~h~-~--------------------------------------~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~ 335 (639)
+....... . .-..++|+| +..++++...+....++.....
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~ 420 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEA 420 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeecccc
Confidence 74332111 0 011268888 6677777777766666654432
Q ss_pred cccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccccccccccccccc
Q psy18073 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVAN 415 (639)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (639)
... .. ...... . .......|... ..+.+......+.+.++-. .+++.+-.
T Consensus 421 ~~~---~~----~~~~~~-~--g~~~~~~p~~~--~~~~~~~~~~~g~l~A~D~------------------~tG~~~W~ 470 (689)
T 1yiq_A 421 PKR---NP----FKSMYQ-L--GLRTGMMPEGA--EGLLEMAKSWSGKLIAWDP------------------VKQQAAWE 470 (689)
T ss_dssp CCC---CS----CTTSCC-C--SSEECCCCSSH--HHHHHHHTTCEEEEEEEET------------------TTTEEEEE
T ss_pred ccc---cc----cccccc-c--CccccccCccc--ccCCCCCCCcceeEEEEEC------------------CCCCeEeE
Confidence 100 00 000000 0 00000001100 0000000000011111110 01111111
Q ss_pred ccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecc-ccccccccCCccccccc
Q psy18073 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG-HVRDTSTRPAVETTDLT 481 (639)
Q Consensus 416 ~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~-~v~~v~~spdg~~~~~~ 481 (639)
+..+ .++..-.+...+ .+++.|+.||.|+.||.++|+.+.+++...+ ...-+.|++||+.+...
T Consensus 471 ~~~~-~~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~ 535 (689)
T 1yiq_A 471 VPYV-TIFNGGTLSTAG-NLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTF 535 (689)
T ss_dssp EEES-SSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ccCC-CCccCccceECC-CEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEE
Confidence 1111 122333455566 7888999999999999999999999875543 33567788898755443
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.69 E-value=2.1e-06 Score=79.01 Aligned_cols=164 Identities=10% Similarity=0.081 Sum_probs=110.1
Q ss_pred cccccccccc--cEEEEEECCCCCeeEEEeeCCC--cEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEE-ecCCe
Q psy18073 165 FVANLDGHKD--GISCLAKHPTKLSTIISGAYDG--EVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV-GIDNT 239 (639)
Q Consensus 165 ~~~~l~~H~~--~V~~l~~sp~~~~~l~sgs~dg--~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~-s~Dg~ 239 (639)
.++++. |.. ....+.|+ ++ .+..+++.+| .|+++|+.+++.+..+.-.. ........++++.|... -.++.
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEec-CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCE
Confidence 344553 443 35789998 67 7888888876 89999999999998886433 33333233345555544 46899
Q ss_pred EEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecC--C---ccEEEEEEcC
Q psy18073 240 IKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWN--V---DSLHHVQFNP 312 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h--~---~~v~~v~~sp 312 (639)
+.++|..+.+... .+.... ....+.+++..+..+++ .|.++|..+.+.+..+.-. . ..++.+.|.
T Consensus 109 v~v~D~~t~~~~~-----ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 109 GFVWNIRNLRQVR-----SFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp EEEEETTTCCEEE-----EEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEEECccCcEEE-----EEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 9999999876643 222222 22334456665555554 8999999999888776542 1 234557776
Q ss_pred CCCcEEEEEeCCCcEEEEECCCccccCCc
Q psy18073 313 IDKHILASCASDRSIILYDTRATVLSRNP 341 (639)
Q Consensus 313 ~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 341 (639)
++.+.+..-.++.|.+.|.++++.+..+
T Consensus 181 -~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 181 -DGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp -TTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred -CCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 5677766667889999999998876543
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=9.8e-08 Score=103.52 Aligned_cols=251 Identities=9% Similarity=0.055 Sum_probs=133.9
Q ss_pred CCcEEEEeCCCCceEEEEeccCCc--------------------------------eEEEEEcCCCCEEEEEecCC----
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGH--------------------------------VRDVCFLPDGSQFLSVGIDN---- 238 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~--------------------------------V~~v~~sp~~~~l~s~s~Dg---- 238 (639)
+|.|+.+|..+|+.+..+...... ...++++|++..++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 799999999999998877542211 13578889888888887664
Q ss_pred ---------------eEEEEeCCCCCCCcccceEEE-----ecCCeeEEeeecCCC---CEEEEcCC--eeEEEeCCCCc
Q psy18073 239 ---------------TIKTWSSELSESDHIVPLHTI-----ISKSVISSISHQRKS---KIFATCGD--QCQLWEHERNE 293 (639)
Q Consensus 239 ---------------~i~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~---~~l~~~~~--~i~vwd~~~~~ 293 (639)
+|..+|..+++..+.+..... ........+....+| ..++.++. .+.++|..+|+
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 599999999876543322100 001111222233366 56666663 89999999999
Q ss_pred eeeeeecCC-----------ccE------------------------EEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 294 PIRAFSWNV-----------DSL------------------------HHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 294 ~~~~~~~h~-----------~~v------------------------~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
.+..+.... .++ ..++|+| +..++++...+-...++.....+.-
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~g 427 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP-QTGLVYLPAQNVPVNLMDDKKWEFN 427 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET-TTTEEEEEEEECCCEEEECTTCCTT
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC-CCCEEEEeChhcceeeecccccccc
Confidence 887665221 011 1467888 6667777766655555544310000
Q ss_pred CCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccC
Q psy18073 339 RNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG 418 (639)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (639)
.. ........... .......+...| .. ..+.+.++ +..+++.+-...
T Consensus 428 ~~-~~~~~~~~~~~-~~g~~~~~~~~~-~~-----------~~g~l~A~------------------D~~tG~~~W~~~- 474 (677)
T 1kb0_A 428 QA-GPGKPQSGTGW-NTAKFFNAEPPK-SK-----------PFGRLLAW------------------DPVAQKAAWSVE- 474 (677)
T ss_dssp CC-CTTSTTGGGTC-CCCEEECSSCCC-SC-----------CEEEEEEE------------------ETTTTEEEEEEE-
T ss_pred cc-ccccccccccc-ccccccccccCC-CC-----------CccEEEEE------------------eCCCCcEEeecC-
Confidence 00 00000000000 000000000000 00 00111110 000111111111
Q ss_pred cccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeec-cccccccccCCcccccc
Q psy18073 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD-GHVRDTSTRPAVETTDL 480 (639)
Q Consensus 419 h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~-~~v~~v~~spdg~~~~~ 480 (639)
+..++....+..++ .+++.|+.||.+++||..+|+.+.++.... ....-+.|+++|+.+..
T Consensus 475 ~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 475 HVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp ESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 22234445566667 678888999999999999999999987443 33445666788865533
No 251
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.63 E-value=6.7e-07 Score=92.17 Aligned_cols=169 Identities=12% Similarity=0.073 Sum_probs=117.2
Q ss_pred hhhhcccccccccc-ccccEEEEEE-C-CCCCeeEEEee------------------CCCcEEEEeCCCCceEEEEeccC
Q psy18073 158 ERVFAKPFVANLDG-HKDGISCLAK-H-PTKLSTIISGA------------------YDGEVKVWNLTSQSCVQTYQAHD 216 (639)
Q Consensus 158 ~~~~~~~~~~~l~~-H~~~V~~l~~-s-p~~~~~l~sgs------------------~dg~i~vWd~~~~~~~~~~~~h~ 216 (639)
-|+.+.++.+.++- ....+..+++ + |++ .+++.++ .++.+.+.|..+.+.+.++..-.
T Consensus 117 Idl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg 195 (595)
T 1fwx_A 117 VRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG 195 (595)
T ss_dssp EETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS
T ss_pred EECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC
Confidence 34444444442221 2235788888 5 898 6676663 35689999999999888876422
Q ss_pred CceEEEEEcCCCCEEEEEecCC--------------------------------------eEEEEeCCC--CCCCcccce
Q psy18073 217 GHVRDVCFLPDGSQFLSVGIDN--------------------------------------TIKTWSSEL--SESDHIVPL 256 (639)
Q Consensus 217 ~~V~~v~~sp~~~~l~s~s~Dg--------------------------------------~i~iwd~~~--~~~~~~~~~ 256 (639)
.-..++++|||+++++.+.+. .|.|.|..+ +... .
T Consensus 196 -~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~----~ 270 (595)
T 1fwx_A 196 -NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLF----T 270 (595)
T ss_dssp -CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSS----E
T ss_pred -CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCcee----E
Confidence 456788999999999888553 366667665 2210 2
Q ss_pred EEEecCCeeEEeeecCCCCEEEEcCC---eeEEEeCCCCc------------eeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 257 HTIISKSVISSISHQRKSKIFATCGD---QCQLWEHERNE------------PIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 257 ~~~~~~~~v~~~~~~~~~~~l~~~~~---~i~vwd~~~~~------------~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
..........++.++|||+++.+++. .|.++|+.+.+ ........ .....++|+| +|...++.
T Consensus 271 ~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~-dG~aY~t~ 348 (595)
T 1fwx_A 271 RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTAFDG-RGNAYTSL 348 (595)
T ss_dssp EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEEECT-TSEEEEEE
T ss_pred EEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceEEECC-CCeEEEEE
Confidence 33333456778999999999888874 99999998653 23333322 3467899999 66767778
Q ss_pred eCCCcEEEEECCC
Q psy18073 322 ASDRSIILYDTRA 334 (639)
Q Consensus 322 s~Dg~i~iwd~~~ 334 (639)
-.|++|.+||+.+
T Consensus 349 ~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 349 FLDSQVVKWNIED 361 (595)
T ss_dssp TTTTEEEEEEHHH
T ss_pred ecCCcEEEEEhhH
Confidence 8899999999875
No 252
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.61 E-value=1.8e-06 Score=84.98 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=130.8
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeE
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVIS 266 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 266 (639)
..|..|+.++.|..+|.. ++.......+...+.++...+++. +..++.++.|..+|.. ++..+.. ......+.
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~----~~~~~~~~ 180 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRF----KTNDAITS 180 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEE----ECSSCCCS
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEE----ecCCCcee
Confidence 356677788889999987 777766665666667777777776 5556777889999887 4432111 11234566
Q ss_pred EeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcccccc
Q psy18073 267 SISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346 (639)
Q Consensus 267 ~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~ 346 (639)
++...+++.+++++ +.+..+| .+++.+.........+.++...+ ++. |..++.++.|..+|. ++.....
T Consensus 181 ~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~-~g~-l~v~t~~~gl~~~~~-~g~~~~~------ 249 (330)
T 3hxj_A 181 AASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE-DGT-IYVTSLDGHLYAINP-DGTEKWR------ 249 (330)
T ss_dssp CCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECT-TSC-EEEEETTTEEEEECT-TSCEEEE------
T ss_pred eeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECC-CCe-EEEEcCCCeEEEECC-CCCEeEE------
Confidence 67777788877777 8888888 67777666665556677778877 554 444566777877763 3322100
Q ss_pred ccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEE
Q psy18073 347 ETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCL 426 (639)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 426 (639)
+......+.++
T Consensus 250 ---------------------------------------------------------------------~~~~~~~~~~~ 260 (330)
T 3hxj_A 250 ---------------------------------------------------------------------FKTGKRIESSP 260 (330)
T ss_dssp ---------------------------------------------------------------------EECSSCCCSCC
T ss_pred ---------------------------------------------------------------------eeCCCCccccc
Confidence 00011112234
Q ss_pred eeCCCCcceEEeccCCceEEEecCCccccceeeeeeccccccccccCCcccc
Q psy18073 427 AKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETT 478 (639)
Q Consensus 427 ~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spdg~~~ 478 (639)
...+++ .|..|+.+|.|..+|. +++.+..+......+.++...++|...
T Consensus 261 ~~~~~g--~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~ 309 (330)
T 3hxj_A 261 VIGNTD--TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY 309 (330)
T ss_dssp EECTTS--CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE
T ss_pred eEcCCC--eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE
Confidence 455555 4666777888999995 787777776555667777777787654
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.57 E-value=2.3e-06 Score=78.72 Aligned_cols=153 Identities=10% Similarity=0.025 Sum_probs=104.7
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceE--EEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR--DVCFLPDGSQFLSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~--~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
....+.|+. + .+.++.+.+|.|+++|+.+++.+..+ - ..... .+++.. ++..+..-.++.+.++|..+.+...
T Consensus 56 ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEE
Confidence 357888884 5 78889999999999999999988877 2 22333 355542 3444455578999999999876543
Q ss_pred ccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecC--C---ccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 253 IVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWN--V---DSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h--~---~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
.++ ....-..++ +++..|..+++ .|.++|..+.+.+..+.-. . ..++.+.|. ++.+.+..-.+.
T Consensus 131 ti~-----~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~ 201 (268)
T 3nok_A 131 TTR-----YSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSS 201 (268)
T ss_dssp EEE-----CSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCS
T ss_pred EEe-----CCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCC
Confidence 322 222222333 55665555443 9999999999988776542 2 244667776 566676666788
Q ss_pred cEEEEECCCccccCCc
Q psy18073 326 SIILYDTRATVLSRNP 341 (639)
Q Consensus 326 ~i~iwd~~~~~~~~~~ 341 (639)
.|.+.|.++++.+..+
T Consensus 202 ~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 202 DVLEIDPATGTVVGVI 217 (268)
T ss_dssp EEEEECTTTCBEEEEE
T ss_pred eEEEEeCCCCcEEEEE
Confidence 9999999998876543
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.55 E-value=1.6e-05 Score=72.51 Aligned_cols=163 Identities=9% Similarity=-0.016 Sum_probs=106.7
Q ss_pred cccccccc--ccEEEEEECCCCCeeEEEeeCCC--cEEEEeCCCCceEEEEeccCCc-eEEEEEcCCCCEEEEEecCCeE
Q psy18073 166 VANLDGHK--DGISCLAKHPTKLSTIISGAYDG--EVKVWNLTSQSCVQTYQAHDGH-VRDVCFLPDGSQFLSVGIDNTI 240 (639)
Q Consensus 166 ~~~l~~H~--~~V~~l~~sp~~~~~l~sgs~dg--~i~vWd~~~~~~~~~~~~h~~~-V~~v~~sp~~~~l~s~s~Dg~i 240 (639)
++++ .|. .....+.|++ + .+..+.+.+| .|+++|+.+++.+..+.-.... --.+++. .++..+..-.++.+
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEE
T ss_pred EEEc-CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEE
Confidence 3444 354 3467899987 5 7777777764 8999999999999887643322 1234443 23444455578999
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEeCCCCceeeeeecCC-----ccEEEEEEcCC
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWEHERNEPIRAFSWNV-----DSLHHVQFNPI 313 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~-----~~v~~v~~sp~ 313 (639)
.++|..+.+... .+.....-..++ +++..+..+++ .|.++|..+.+.+..+.-.. ..++.+.+.
T Consensus 88 ~v~D~~tl~~~~-----ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-- 158 (243)
T 3mbr_X 88 FVYDLATLTPRA-----RFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-- 158 (243)
T ss_dssp EEEETTTTEEEE-----EEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--
T ss_pred EEEECCcCcEEE-----EEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--
Confidence 999999866532 332222223343 44554444343 99999999998887775422 245566665
Q ss_pred CCcEEEEEeCCCcEEEEECCCccccCCc
Q psy18073 314 DKHILASCASDRSIILYDTRATVLSRNP 341 (639)
Q Consensus 314 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 341 (639)
++.+.+..-.+..|.+.|.++++.+..+
T Consensus 159 ~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 159 NGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp TTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 5666666656889999999999876543
No 255
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.53 E-value=3.9e-09 Score=105.86 Aligned_cols=171 Identities=8% Similarity=-0.004 Sum_probs=93.0
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCc-eEE-EEEcCCCCEE
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH-VRD-VCFLPDGSQF 231 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~-V~~-v~~sp~~~~l 231 (639)
.+..||..+++.+-.+.. +.+.+..+.+++ ..+++++.||.|+.||..+|+.+..+..+... +.+ ..+. ++..+
T Consensus 20 ~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v 95 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGIL 95 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------C
T ss_pred EEEEEECCCCCEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEE
Confidence 356677777777666654 455566666777 78888899999999999999887766543211 110 0111 35578
Q ss_pred EEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEE
Q psy18073 232 LSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQ 309 (639)
Q Consensus 232 ~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 309 (639)
++++.|+.|..||..+++..+...... ....+|++..+++++ +.+..||.++|+.+..+..+. .....
T Consensus 96 ~~g~~dg~v~a~D~~tG~~~w~~~~~~--------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~ 165 (369)
T 2hz6_A 96 YMGKKQDIWYVIDLLTGEKQQTLSSAF--------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASL 165 (369)
T ss_dssp CCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBC
T ss_pred EEEeCCCEEEEEECCCCcEEEEecCCC--------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCcc
Confidence 888899999999999988765443321 123445666666555 389999999999877765321 12223
Q ss_pred EcCCCC---cEEEEEeCCCcEEEEECCCccccC
Q psy18073 310 FNPIDK---HILASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 310 ~sp~~~---~~l~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
+.+ +. ..++.++.||.|..||.++++.+-
T Consensus 166 ~~~-~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 166 PED-DVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp CCC-CTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred ccC-CccccceEEEECCCCEEEEEECCCCcEEE
Confidence 333 21 456778899999999999987653
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.52 E-value=1.4e-05 Score=77.70 Aligned_cols=234 Identities=8% Similarity=0.012 Sum_probs=137.5
Q ss_pred cccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEE
Q psy18073 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDN--TIKT 242 (639)
Q Consensus 165 ~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg--~i~i 242 (639)
.+..+... .....++|+|+| .++++-..++.|..||... .....+. -.+.+..+++.++|+++++..... .|..
T Consensus 24 ~~~~~p~~-~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 24 IITSFPVN-TFLENLASAPDG-TIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEECTT-CCEEEEEECTTS-CEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred EeEeCCCC-CCcceEEECCCC-CEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 33444322 467899999998 7777777889999999765 3333333 345688999999999766654332 4666
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC--CeeEEEeCCCCce-eeeee---------cCCccEEEEEE
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG--DQCQLWEHERNEP-IRAFS---------WNVDSLHHVQF 310 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~vwd~~~~~~-~~~~~---------~h~~~v~~v~~ 310 (639)
+|..+++.. .............++..+++..+++.. +.|.++|...++. +.... +.-.....+
T Consensus 100 ~d~~~g~~~---~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 100 LVKSDGTVE---TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp EECTTSCEE---EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred EcCCCCeEE---EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--
Confidence 676654421 111111112234444455555555543 3788888765431 11100 111234555
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCC-ccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeee
Q psy18073 311 NPIDKHILASCASDRSIILYDTRA-TVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPF 389 (639)
Q Consensus 311 sp~~~~~l~s~s~Dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 389 (639)
+|+++.++++-...+.|..+|+.. +.... .
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~---------~---------------------------------------- 205 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE---------P---------------------------------------- 205 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCC---------C----------------------------------------
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc---------c----------------------------------------
Confidence 773445566666678899998764 21100 0
Q ss_pred ecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccce--eeeeeccccc
Q psy18073 390 VGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ--TYQAHDGHVR 467 (639)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~--~l~~h~~~v~ 467 (639)
.....+ .....++++++| ++.++....+.|.++|.. |+... .+.......+
T Consensus 206 ---------------------~~~~~~----~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~ 258 (306)
T 2p4o_A 206 ---------------------EIFVEQ----TNIDDFAFDVEG-NLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGST 258 (306)
T ss_dssp ---------------------EEEEES----CCCSSEEEBTTC-CEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEE
T ss_pred ---------------------EEEecc----CCCCCeEECCCC-CEEEEeCCCCeEEEECCC-CCEEEEeecccccCCce
Confidence 000000 234678899999 887777777889999975 65422 2322224578
Q ss_pred ccccc---CCccccccccc
Q psy18073 468 DTSTR---PAVETTDLTRS 483 (639)
Q Consensus 468 ~v~~s---pdg~~~~~~~~ 483 (639)
+++|. ||+..+-++..
T Consensus 259 ~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 259 AVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECCSTTTTTEEEEEEC
T ss_pred EEEEecccCCCCEEEEECC
Confidence 89998 88877666544
No 257
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.50 E-value=2.3e-06 Score=79.94 Aligned_cols=202 Identities=7% Similarity=0.050 Sum_probs=126.6
Q ss_pred ceEEEEeccCC--ceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-
Q psy18073 207 SCVQTYQAHDG--HVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG- 281 (639)
Q Consensus 207 ~~~~~~~~h~~--~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 281 (639)
+.+.++. |.. ....++|+||+.+.++.+. ++.|++.|+.+++.....++ ........+++..+..+.++-.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~~ 85 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETTC
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEecC
Confidence 4455664 543 3689999998766666553 68999999999876432221 1122333455554333333332
Q ss_pred CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCC
Q psy18073 282 DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDP 361 (639)
Q Consensus 282 ~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (639)
+.+.++|..+.+.+.++...... ...++++++.+++| ..+++|.++|..+.+....+..
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~V------------------ 144 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGS-DGTSILYEIDPHTFKLIKKHNV------------------ 144 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEE-CSSSEEEEECTTTCCEEEEEEC------------------
T ss_pred CEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEE-CCCCeEEEEECCCCcEEEEEEE------------------
Confidence 39999999999999888643111 23355534445544 5688999999988665432110
Q ss_pred CCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccC
Q psy18073 362 SLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAY 441 (639)
Q Consensus 362 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~ 441 (639)
..-...-..++.+.|. +| .+.+....
T Consensus 145 ----------------------------------------------------g~~~~p~~~~nele~~-dg-~lyvn~~~ 170 (266)
T 2iwa_A 145 ----------------------------------------------------KYNGHRVIRLNELEYI-NG-EVWANIWQ 170 (266)
T ss_dssp ----------------------------------------------------EETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred ----------------------------------------------------CCCCcccccceeEEEE-CC-EEEEecCC
Confidence 0000011235677777 67 77777777
Q ss_pred CceEEEecCCccccceeeeeec-------------cccccccccCCcccccccccccccC
Q psy18073 442 DGEVKVWNLTSQSCVQTYQAHD-------------GHVRDTSTRPAVETTDLTRSFGWES 488 (639)
Q Consensus 442 Dg~v~iWd~~~~~~~~~l~~h~-------------~~v~~v~~spdg~~~~~~~~~~~~~ 488 (639)
++.|.+-|..+++.+..+.... .....++|+|+++.+-++ .-.|+.
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT-gk~~~~ 229 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT-GKLWPK 229 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE-ETTCSE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE-CCCCCe
Confidence 8899999999999999886321 244789999999765443 345654
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.50 E-value=4.1e-06 Score=77.13 Aligned_cols=195 Identities=12% Similarity=0.132 Sum_probs=124.2
Q ss_pred eEEEEeccCCc--eEEEEEcCCCCEEEEEecCC--eEEEEeCCCCCCCcccceEEEecCCee--EEeeecCCCCEEEEcC
Q psy18073 208 CVQTYQAHDGH--VRDVCFLPDGSQFLSVGIDN--TIKTWSSELSESDHIVPLHTIISKSVI--SSISHQRKSKIFATCG 281 (639)
Q Consensus 208 ~~~~~~~h~~~--V~~v~~sp~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~ 281 (639)
.+.++. |... ...+.|+ ++.++.+.+.+| .|+++|+.+++..... ...... ..++...+..+.++..
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-----~l~~~~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI-----ELGKRYFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE-----ECCTTCCEEEEEEETTEEEEEESS
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE-----ecCCccceeEEEEeCCEEEEEEee
Confidence 455563 5443 5889998 777788888876 9999999998764322 222322 3355554444444443
Q ss_pred C-eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCC
Q psy18073 282 D-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNID 360 (639)
Q Consensus 282 ~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (639)
+ .+.+||..+.+.+.++...... .+++ ++++.+++| ..+++|.++|..+.+....+...
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~eG-~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~---------------- 165 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDGEG-WGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVT---------------- 165 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSSCC-CCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECE----------------
T ss_pred CCEEEEEECccCcEEEEEECCCCc-eEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEec----------------
Confidence 3 9999999999999988753322 2344 424444444 45778999999887654322100
Q ss_pred CCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcc-cceeEEeeCCCCcceEEec
Q psy18073 361 PSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHK-DGISCLAKHPTKLSTIISG 439 (639)
Q Consensus 361 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~~l~sg 439 (639)
..+.. ..++.+.|. +| .+.|..
T Consensus 166 -------------------------------------------------------~~g~~~~~lNELe~~-~G-~lyan~ 188 (262)
T 3nol_A 166 -------------------------------------------------------AHGEELPELNELEWV-DG-EIFANV 188 (262)
T ss_dssp -------------------------------------------------------ETTEECCCEEEEEEE-TT-EEEEEE
T ss_pred -------------------------------------------------------cCCccccccceeEEE-CC-EEEEEE
Confidence 01111 234456665 67 666766
Q ss_pred cCCceEEEecCCccccceeeeee------------ccccccccccCCccccccccccccc
Q psy18073 440 AYDGEVKVWNLTSQSCVQTYQAH------------DGHVRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 440 s~Dg~v~iWd~~~~~~~~~l~~h------------~~~v~~v~~spdg~~~~~~~~~~~~ 487 (639)
-.++.|.+.|..+|+.+..+... ....+.+||+|+++.+-++. -.|.
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG-K~Wp 247 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG-KLWP 247 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE-TTCS
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC-CCCC
Confidence 67889999999999998887542 12457899999987765443 3455
No 259
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.50 E-value=1.5e-06 Score=84.51 Aligned_cols=144 Identities=9% Similarity=0.067 Sum_probs=100.2
Q ss_pred cEEEEEECCCCCeeEEE----eeC-------------CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC
Q psy18073 175 GISCLAKHPTKLSTIIS----GAY-------------DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID 237 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~s----gs~-------------dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D 237 (639)
.+++++++|+| .+.+| |.. .+.|..||..+++..... .......++|+||++.|+.+...
T Consensus 132 ~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 132 SPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECC
T ss_pred CCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecC
Confidence 46789999999 78876 432 256888887677654433 34567889999999988777665
Q ss_pred ------CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEc
Q psy18073 238 ------NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFN 311 (639)
Q Consensus 238 ------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~s 311 (639)
+.|.+||+.... .................++++++|.+.++..+.|.+||. .++.+..+..+. .+.+++|+
T Consensus 209 ~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~-~g~~~~~~~~~~-~~~~~~f~ 285 (305)
T 3dr2_A 209 EQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDS-DGQLLGHIPTPG-TASNCTFD 285 (305)
T ss_dssp C---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECT-TSCEEEEEECSS-CCCEEEEC
T ss_pred CcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECC-CCCEEEEEECCC-ceeEEEEe
Confidence 789999987543 100001111123345678899999988777668999998 477777776655 58899999
Q ss_pred CCCCcEEEEEeCCC
Q psy18073 312 PIDKHILASCASDR 325 (639)
Q Consensus 312 p~~~~~l~s~s~Dg 325 (639)
| +++.|..++.++
T Consensus 286 ~-d~~~L~it~~~~ 298 (305)
T 3dr2_A 286 Q-AQQRLFITGGPC 298 (305)
T ss_dssp T-TSCEEEEEETTE
T ss_pred C-CCCEEEEEcCCe
Confidence 8 666666666654
No 260
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.43 E-value=1.8e-06 Score=85.01 Aligned_cols=158 Identities=8% Similarity=0.025 Sum_probs=93.9
Q ss_pred hccccccccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeE
Q psy18073 161 FAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTI 240 (639)
Q Consensus 161 ~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i 240 (639)
.+++.+.....+...+.++...++| . |..|+.+ |..+|. +++.+..+...........+. +..+..++.++.|
T Consensus 47 ~~g~~~~~~~~~~~~~~~~~~~~~g-~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l 119 (330)
T 3hxj_A 47 TDGSVKWFFKSGEIIECRPSIGKDG-T-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHL 119 (330)
T ss_dssp TTSCEEESSCGGGEEEECCEETTTT-E-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEE
T ss_pred CCCcEEEEEecCCCcccceEEecCC-c-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEE
Confidence 3444443344445566788888877 4 4445444 888885 555443333222222223333 4567777788889
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEE
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILA 319 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~ 319 (639)
..+|.. +...+ ........+.++...+++.+++... +.+..+|.. ++.+..+......+.++...+ ++.+.+
T Consensus 120 ~~~d~~-g~~~~----~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~-~g~l~v 192 (330)
T 3hxj_A 120 YAINTD-GTEKW----RFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGK-DGTIYF 192 (330)
T ss_dssp EEECTT-SCEEE----EEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TCCEEE
T ss_pred EEEcCC-CCEEE----EEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcC-CCEEEE
Confidence 999887 44321 1112233456667777888777665 489999988 777777666556667777766 565554
Q ss_pred EEeCCCcEEEEECCCcc
Q psy18073 320 SCASDRSIILYDTRATV 336 (639)
Q Consensus 320 s~s~Dg~i~iwd~~~~~ 336 (639)
. + +.|..+| .+++
T Consensus 193 ~-t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 193 G-S--DKVYAIN-PDGT 205 (330)
T ss_dssp E-S--SSEEEEC-TTSC
T ss_pred E-e--CEEEEEC-CCCc
Confidence 3 3 7788888 5543
No 261
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.40 E-value=3.1e-06 Score=91.70 Aligned_cols=152 Identities=7% Similarity=0.015 Sum_probs=99.4
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEecc-C----CceEEEEEcCCCCEEEEEec------CCeEEEEeCCCCCCCcccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAH-D----GHVRDVCFLPDGSQFLSVGI------DNTIKTWSSELSESDHIVP 255 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-~----~~V~~v~~sp~~~~l~s~s~------Dg~i~iwd~~~~~~~~~~~ 255 (639)
..|+.++.|+.|..+|..+|+.+..+..+ . ..+.+--.. .+..++.++. ++.|..+|..+++..+...
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 57888889999999999999999888754 2 112211111 2344554443 7999999999988654332
Q ss_pred eEEEe----------------------------cCCeeEEeeecCCCCEEEEcCC---------------------eeEE
Q psy18073 256 LHTII----------------------------SKSVISSISHQRKSKIFATCGD---------------------QCQL 286 (639)
Q Consensus 256 ~~~~~----------------------------~~~~v~~~~~~~~~~~l~~~~~---------------------~i~v 286 (639)
..... +......++++|++..+..+.+ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 21100 0111235677887776665543 3889
Q ss_pred EeCCCCceeeeeec--CC-------ccEEEEEEcCCCC---cEEEEEeCCCcEEEEECCCccccCC
Q psy18073 287 WEHERNEPIRAFSW--NV-------DSLHHVQFNPIDK---HILASCASDRSIILYDTRATVLSRN 340 (639)
Q Consensus 287 wd~~~~~~~~~~~~--h~-------~~v~~v~~sp~~~---~~l~s~s~Dg~i~iwd~~~~~~~~~ 340 (639)
+|.++|+.+..++. |. ....-+.... ++ ..++.++.+|.|.++|.++|+.+..
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 99999998888764 21 1122233333 45 6899999999999999999987643
No 262
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=1.7e-05 Score=87.36 Aligned_cols=157 Identities=10% Similarity=0.128 Sum_probs=97.0
Q ss_pred cccc-cEEEEEEC-CCCCeeEEEe-eCCC----cEEEEeCCCC-ceEE-EEeccCCceEEEEEcCCCCEEEEEecC----
Q psy18073 171 GHKD-GISCLAKH-PTKLSTIISG-AYDG----EVKVWNLTSQ-SCVQ-TYQAHDGHVRDVCFLPDGSQFLSVGID---- 237 (639)
Q Consensus 171 ~H~~-~V~~l~~s-p~~~~~l~sg-s~dg----~i~vWd~~~~-~~~~-~~~~h~~~V~~v~~sp~~~~l~s~s~D---- 237 (639)
+|.- .+...+|| ||| ++||-+ +.+| +|+++|+.++ +.+. .+. .....++|+|||+.|+..+.|
T Consensus 170 ~~~~~~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCC
Confidence 4553 68899999 999 766643 3333 5999999998 6321 121 123468899999988877765
Q ss_pred -CeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC----C-eeEEEeCCCCc--e--eeeeecCCccEEE
Q psy18073 238 -NTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG----D-QCQLWEHERNE--P--IRAFSWNVDSLHH 307 (639)
Q Consensus 238 -g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~-~i~vwd~~~~~--~--~~~~~~h~~~v~~ 307 (639)
..|.++++.++..... .+...........+.++|||++|+... . .|.++|+.++. . ........+...+
T Consensus 246 ~~~v~~~~lgt~~~~~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp EEEEEEEETTSCGGGCE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred CCEEEEEECCCCchhcE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 3688888876432111 111112223456789999999877654 1 78899998763 3 2233344456666
Q ss_pred EEEcCCCCcEEEEEeCC--C--cEEEEECC
Q psy18073 308 VQFNPIDKHILASCASD--R--SIILYDTR 333 (639)
Q Consensus 308 v~~sp~~~~~l~s~s~D--g--~i~iwd~~ 333 (639)
+.|+. ++.+++....+ + .|..+|+.
T Consensus 325 ~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 325 VQMHG-TSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp EEEET-TTEEEEEECTTTCTTCEEEEEETT
T ss_pred Eeeee-CCEEEEEeCCCCCCCcEEEEEcCC
Confidence 66655 55555555554 3 34445543
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.37 E-value=1.7e-05 Score=72.99 Aligned_cols=193 Identities=11% Similarity=0.071 Sum_probs=125.6
Q ss_pred ceEEEEeccCC--ceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-e
Q psy18073 207 SCVQTYQAHDG--HVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-Q 283 (639)
Q Consensus 207 ~~~~~~~~h~~--~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~ 283 (639)
+.+.++. |.. ....+.|+ ++.+.++.+.+|.|+++|+.+++..... +.....-..+++..+..+.++..+ .
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESSSCE
T ss_pred EEEEEEc-CCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEccCCE
Confidence 3445553 443 35788887 4677888899999999999998875332 222222344666655445554444 9
Q ss_pred eEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCCCCCC
Q psy18073 284 CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSL 363 (639)
Q Consensus 284 i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (639)
+.+||..+.+.+.++..... -.+++ + +++.|+.+..++.|.++|..+.+....+...
T Consensus 118 v~V~D~~Tl~~~~ti~~~~e-GwGLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~------------------- 174 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYSGE-GWGLC--Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVK------------------- 174 (268)
T ss_dssp EEEEETTTTEEEEEEECSSC-CCCEE--E-ETTEEEEECSSSEEEEECTTTCCEEEEEECE-------------------
T ss_pred EEEEECCcCcEEEEEeCCCc-eeEEe--c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeC-------------------
Confidence 99999999999998875322 23444 4 3455555556889999999887655322110
Q ss_pred CCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEeccCCc
Q psy18073 364 HPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDG 443 (639)
Q Consensus 364 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg 443 (639)
.-...-..++.+.|. +| .+.|..-.++
T Consensus 175 ---------------------------------------------------~~g~~v~~lNeLe~~-dG-~lyanvw~s~ 201 (268)
T 3nok_A 175 ---------------------------------------------------LRGQPVELINELECA-NG-VIYANIWHSS 201 (268)
T ss_dssp ---------------------------------------------------ETTEECCCEEEEEEE-TT-EEEEEETTCS
T ss_pred ---------------------------------------------------CCCcccccccccEEe-CC-EEEEEECCCC
Confidence 000011234556666 67 6667666788
Q ss_pred eEEEecCCccccceeeeee-------------ccccccccccCCccccccc
Q psy18073 444 EVKVWNLTSQSCVQTYQAH-------------DGHVRDTSTRPAVETTDLT 481 (639)
Q Consensus 444 ~v~iWd~~~~~~~~~l~~h-------------~~~v~~v~~spdg~~~~~~ 481 (639)
.|.+-|..+|+.+..+... ....+.|||+|+++.+-++
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 9999999999998887532 1245789999988776554
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.33 E-value=0.00015 Score=67.25 Aligned_cols=166 Identities=11% Similarity=0.135 Sum_probs=111.0
Q ss_pred ccccccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec-cCCceEEEEEcCCCCEEEEEecCCeEEEEeCC
Q psy18073 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246 (639)
Q Consensus 168 ~l~~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~ 246 (639)
.+.|-.+.+..++|+|++..++++...++.|...|.. ++.+..+.- -....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3555666899999999874566667788999999987 888877742 12457889999998877776677889999887
Q ss_pred CCCCCcccceEEE-----ecCCeeEEeeecCCCCEEEEcCC--eeEEEeCC---CCceeeeee-------cCCccEEEEE
Q psy18073 247 LSESDHIVPLHTI-----ISKSVISSISHQRKSKIFATCGD--QCQLWEHE---RNEPIRAFS-------WNVDSLHHVQ 309 (639)
Q Consensus 247 ~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd~~---~~~~~~~~~-------~h~~~v~~v~ 309 (639)
............+ ........++++|++..|.++.. ...+|.++ .+..+..+. .+...+.+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 6543211111111 22345789999998865555543 33444443 111222221 1234678999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 310 FNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 310 ~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
++|..+.+++.....+.+.++|...
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCC
Confidence 9997778888877888888998653
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.29 E-value=7.9e-05 Score=72.87 Aligned_cols=155 Identities=10% Similarity=0.097 Sum_probs=98.5
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec--------------------cCCceEEEEEcC-CCCEEE
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA--------------------HDGHVRDVCFLP-DGSQFL 232 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~--------------------h~~~V~~v~~sp-~~~~l~ 232 (639)
....+++|+++| .++.++..++.|..||..+++.. .+.. ....+..+++.+ +++ |+
T Consensus 19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp SCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred CCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EE
Confidence 345778999998 77888888999999998765433 2321 013578999998 565 54
Q ss_pred EEecCCeEEEEeCCCCCCCcccceEEE-ecCCeeEEeeecC-CCCEEEEcC-------------------CeeEEEeCCC
Q psy18073 233 SVGIDNTIKTWSSELSESDHIVPLHTI-ISKSVISSISHQR-KSKIFATCG-------------------DQCQLWEHER 291 (639)
Q Consensus 233 s~s~Dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~-------------------~~i~vwd~~~ 291 (639)
.+...+.|..+|..++... .+..... ........+++.+ +|.++++.. +.+..||..+
T Consensus 96 v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 5544555888887653321 1100000 0113467899999 998877642 2577788776
Q ss_pred CceeeeeecCCccEEEEEEcCCCCc-EEEEEeCCCcEEEEECCC
Q psy18073 292 NEPIRAFSWNVDSLHHVQFNPIDKH-ILASCASDRSIILYDTRA 334 (639)
Q Consensus 292 ~~~~~~~~~h~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~~ 334 (639)
++....... ......++++| +++ ++++-+..+.|..+|+..
T Consensus 175 ~~~~~~~~~-~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 175 KETTLLLKE-LHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TEEEEEEEE-ESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSS
T ss_pred CEEEEeccC-CccCcceEECC-CCCEEEEEeCCCCeEEEEECCC
Confidence 654332221 23446799999 666 445546678899999864
No 266
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.28 E-value=9.1e-06 Score=88.27 Aligned_cols=160 Identities=12% Similarity=0.112 Sum_probs=109.1
Q ss_pred EEEEECCCCCeeEEEeeCCCc-------------------EEEEeCCCCceEEEEec--cC-------CceEEEEEcCCC
Q psy18073 177 SCLAKHPTKLSTIISGAYDGE-------------------VKVWNLTSQSCVQTYQA--HD-------GHVRDVCFLPDG 228 (639)
Q Consensus 177 ~~l~~sp~~~~~l~sgs~dg~-------------------i~vWd~~~~~~~~~~~~--h~-------~~V~~v~~sp~~ 228 (639)
..++++|++ .+++.++.++. |..||..+|+.+..++. |. .++.......+|
T Consensus 238 ~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 238 DSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp SCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 367889988 78888887764 99999999999988764 32 122222222356
Q ss_pred C---EEEEEecCCeEEEEeCCCCCCCcccceE-----E-Ee------------------cC-----------CeeEEeee
Q psy18073 229 S---QFLSVGIDNTIKTWSSELSESDHIVPLH-----T-II------------------SK-----------SVISSISH 270 (639)
Q Consensus 229 ~---~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-----~-~~------------------~~-----------~~v~~~~~ 270 (639)
+ .++.++.+|.+.++|..+++.....+.. . .. .. ..-..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 5 7889999999999999998764211110 0 00 00 00112677
Q ss_pred cCCCCEEEEc-----------------------------------------------CCeeEEEeCCCCceeeeeecCCc
Q psy18073 271 QRKSKIFATC-----------------------------------------------GDQCQLWEHERNEPIRAFSWNVD 303 (639)
Q Consensus 271 ~~~~~~l~~~-----------------------------------------------~~~i~vwd~~~~~~~~~~~~h~~ 303 (639)
+|+..++.+. .+.+..||+.+++.+..+..+..
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~ 476 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI 476 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC
Confidence 8876666543 13588999999999888876543
Q ss_pred cEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccC
Q psy18073 304 SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSR 339 (639)
Q Consensus 304 ~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 339 (639)
. ..-.+.. .+.+++.|+.||.++.||.++|+.+-
T Consensus 477 ~-~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 477 F-NGGTLST-AGNLVFEGSADGRVIAYAADTGEKLW 510 (689)
T ss_dssp C-CCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred c-cCccceE-CCCEEEEECCCCcEEEEECCCCccce
Confidence 2 2234444 56788899999999999999998763
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.28 E-value=0.00023 Score=71.42 Aligned_cols=156 Identities=6% Similarity=-0.106 Sum_probs=100.1
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS-QFLSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~-~l~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
..+..++|++.+..++++-...+.|..+++..+.....+.........+++.+.+. +.++-...+.|.+.++......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~- 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK- 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-
Confidence 45789999976536667767788999999877654444433334567889987544 4456566788999888743211
Q ss_pred ccceEEEecCCeeEEeeecCCCCEEEEcC----CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 253 IVPLHTIISKSVISSISHQRKSKIFATCG----DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
......-.....++++|.+..+..+. ..|..++++...........-....+++++|+++.+.++-+..+.|.
T Consensus 195 ---~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 195 ---VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp ---EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ---EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 11111224678899998655444333 26777777644333333333455789999985666666666677788
Q ss_pred EEECC
Q psy18073 329 LYDTR 333 (639)
Q Consensus 329 iwd~~ 333 (639)
.+|+.
T Consensus 272 ~~d~d 276 (386)
T 3v65_B 272 RANLD 276 (386)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 88864
No 268
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.26 E-value=1.7e-05 Score=78.34 Aligned_cols=292 Identities=10% Similarity=0.000 Sum_probs=153.4
Q ss_pred hhhhhhhhccccccccccccccEEEEEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEEeccC-------
Q psy18073 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTYQAHD------- 216 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~~~h~------- 216 (639)
.+.+.|..+++.+.++..-..+ . ++++||| +++..+. .++.|.+||..+++.+.++....
T Consensus 60 ~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g 136 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMIDGGFLP-N-PVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVG 136 (386)
T ss_dssp EEEEEETTTTEEEEEEEECSSC-E-EEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred EEEEEECCCCeEEEEEECCCCC-c-EEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccC
Confidence 4555667777777777654555 4 9999999 6665554 36789999999999988875321
Q ss_pred CceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC-C-EEEEc-CCeeEEEeCCC
Q psy18073 217 GHVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS-K-IFATC-GDQCQLWEHER 291 (639)
Q Consensus 217 ~~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-~l~~~-~~~i~vwd~~~ 291 (639)
.....++|+|||++++.+.. ++.|.++|+.+.+....++ ..+. .. ..|.+ . +++.+ ++.+.+.++.+
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-----v~g~--~~-~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-----VPDC--YH-IFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-----CCSE--EE-EEEEETTEEEEEETTSCEEEEECCS
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-----CCCc--ce-eecCCCceeEEECCCCCEEEEECCC
Confidence 24567999999999988864 6899999999876543222 2111 01 11211 1 11222 23555555544
Q ss_pred -CceeeeeecC----CccEE-EEEEcCCCCcEEEEEeCCCcEEEEECCCccc--cCCccccccccccccccccCCCCCCC
Q psy18073 292 -NEPIRAFSWN----VDSLH-HVQFNPIDKHILASCASDRSIILYDTRATVL--SRNPDEYLRETKTSIHRIPRNIDPSL 363 (639)
Q Consensus 292 -~~~~~~~~~h----~~~v~-~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (639)
++.......+ ..++. ...|.+.++++++ .+.+|+|.+.|+.++.. .......... .....|
T Consensus 209 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~----------~~~~g~ 277 (386)
T 3sjl_D 209 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEA----------ERADGW 277 (386)
T ss_dssp SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHH----------HHHTTE
T ss_pred CCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccc----------cccccc
Confidence 3332211111 12221 2355432665554 56689999999976542 2211100000 000011
Q ss_pred CCCCCchhhhhhccccccceeeeeeeecCcc--ceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe-cc
Q psy18073 364 HPFEGPREYVRALNATKLERVFAKPFVGPRE--YVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS-GA 440 (639)
Q Consensus 364 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s-gs 440 (639)
.|.+.. .+..+.....+........+ .-......+.++..+.+.+..+.- ...+.+|+++||+..+|++ ..
T Consensus 278 ~p~g~q-----~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 278 RPGGWQ-----QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp EECSSS-----CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET
T ss_pred cCCCcc-----eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC
Confidence 111110 00001111111111100000 000000111122222222232221 1367899999999325544 56
Q ss_pred CCceEEEecCCccccceeeeeeccccccccccCC
Q psy18073 441 YDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474 (639)
Q Consensus 441 ~Dg~v~iWd~~~~~~~~~l~~h~~~v~~v~~spd 474 (639)
.++.|.++|..+++.+.++..- +.-+.+.+++|
T Consensus 352 ~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 352 GDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 6999999999999999988543 55667778877
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.24 E-value=0.0005 Score=67.86 Aligned_cols=157 Identities=8% Similarity=-0.092 Sum_probs=100.7
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEeCCCCCCCc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG-SQFLSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~-~~l~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
..+..++|++.+..++++-...+.|..+++..+.....+.........+++.+.+ ++.++-...+.|.+.++......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~- 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK- 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE-
Confidence 3578999997653666676678899999987765444443333456789998754 45556666789999998753221
Q ss_pred ccceEEEecCCeeEEeeecCCCC-EEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 253 IVPLHTIISKSVISSISHQRKSK-IFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
......-.....++++|.+. ++.+-. ..|..++++...........-....+++++|+++.+.++-+..+.|.
T Consensus 152 ---~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 152 ---VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp ---EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ---EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 11111224678899998554 444433 26777777644332222333446789999985666666666677888
Q ss_pred EEECCC
Q psy18073 329 LYDTRA 334 (639)
Q Consensus 329 iwd~~~ 334 (639)
.+|+..
T Consensus 229 ~~~~dG 234 (349)
T 3v64_C 229 RANLDG 234 (349)
T ss_dssp EEETTS
T ss_pred EEeCCC
Confidence 888753
No 270
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.23 E-value=6.1e-05 Score=75.54 Aligned_cols=145 Identities=7% Similarity=0.022 Sum_probs=89.4
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCCce-----EEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEec
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV-----RDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIIS 261 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V-----~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~ 261 (639)
..++.++.++.|..+|..+|+.+.......... ..... .+..++.++.++.|..+|..+++..+.........
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 467778889999999999999887775432211 11122 24567788889999999999877643332211000
Q ss_pred C---CeeEEeeecC---CCCEEEEcC-CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 262 K---SVISSISHQR---KSKIFATCG-DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 262 ~---~~v~~~~~~~---~~~~l~~~~-~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
. ..+..+...| ++.+++.+. +.+..+|..+++.+..... .....+... +..++.++.+|.|..+|..+
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~---~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD---GNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp --------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE---TTEEEEEETTCCEEEEETTT
T ss_pred CcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE---CCEEEEEcCCCeEEEEECCC
Confidence 0 0000111111 344444443 4899999999988766553 234444443 44677778899999999988
Q ss_pred cccc
Q psy18073 335 TVLS 338 (639)
Q Consensus 335 ~~~~ 338 (639)
++..
T Consensus 297 G~~~ 300 (376)
T 3q7m_A 297 GVTL 300 (376)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7653
No 271
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.14 E-value=7e-05 Score=68.35 Aligned_cols=196 Identities=14% Similarity=0.130 Sum_probs=121.1
Q ss_pred ceEEEEeccCC--ceEEEEEcCCCCEEEEEecCC--eEEEEeCCCCCCCcccceEEEecCCee--EEeeecCCCCEEEEc
Q psy18073 207 SCVQTYQAHDG--HVRDVCFLPDGSQFLSVGIDN--TIKTWSSELSESDHIVPLHTIISKSVI--SSISHQRKSKIFATC 280 (639)
Q Consensus 207 ~~~~~~~~h~~--~V~~v~~sp~~~~l~s~s~Dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~ 280 (639)
+.+.++ .|.. ....+.|++ +.++.+.+.+| .|+..|+.+++... ........ ..++...+..+.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~-----~~~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQ-----RAEVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEE-----EEECCTTCCEEEEEEETTEEEEEES
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEE-----EEeCCCCcceeEEEEeCCEEEEEEe
Confidence 345555 3654 467899986 66777777754 99999999987642 22222222 334444433333333
Q ss_pred CC-eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCCC
Q psy18073 281 GD-QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNI 359 (639)
Q Consensus 281 ~~-~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (639)
.+ .+.+||..+.+.+.++...... .+++ ++++.+++| ..++.|.++|..+.+...++....
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~-------------- 144 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTA-------------- 144 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEE--------------
T ss_pred eCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEcc--------------
Confidence 33 8999999999999988754332 3444 424455555 458889999998876553221100
Q ss_pred CCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccC-cccceeEEeeCCCCcceEEe
Q psy18073 360 DPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDG-HKDGISCLAKHPTKLSTIIS 438 (639)
Q Consensus 360 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~s 438 (639)
.+ .-..++.+.|. +| .+.|.
T Consensus 145 ---------------------------------------------------------~g~~~~~lNeLe~~-~G-~lyan 165 (243)
T 3mbr_X 145 ---------------------------------------------------------GGRPLDNLNELEWV-NG-ELLAN 165 (243)
T ss_dssp ---------------------------------------------------------TTEECCCEEEEEEE-TT-EEEEE
T ss_pred ---------------------------------------------------------CCcccccceeeEEe-CC-EEEEE
Confidence 00 01223455555 56 66666
Q ss_pred ccCCceEEEecCCccccceeeeee-------------ccccccccccCCccccccccccccc
Q psy18073 439 GAYDGEVKVWNLTSQSCVQTYQAH-------------DGHVRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 439 gs~Dg~v~iWd~~~~~~~~~l~~h-------------~~~v~~v~~spdg~~~~~~~~~~~~ 487 (639)
.-.+..|.+-|..+|+.+..+... ....+.+|++|+++.+-++. --|.
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG-K~wp 226 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG-KRWP 226 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE-TTCS
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC-CCCC
Confidence 656778999999999988887522 12457799999887665443 2354
No 272
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.12 E-value=4.7e-05 Score=75.79 Aligned_cols=166 Identities=7% Similarity=0.033 Sum_probs=108.6
Q ss_pred hhhhhhhhcccccccccc--cc-ccEEEEEECCCCCeeEEEee-------------------CCCcEEEEeCCCCceEEE
Q psy18073 154 ATKLERVFAKPFVANLDG--HK-DGISCLAKHPTKLSTIISGA-------------------YDGEVKVWNLTSQSCVQT 211 (639)
Q Consensus 154 ~~~~~~~~~~~~~~~l~~--H~-~~V~~l~~sp~~~~~l~sgs-------------------~dg~i~vWd~~~~~~~~~ 211 (639)
.+-+.|..+.+.+.++.. +. ..-+.+.|+|++ +.+++.. .+.+|.+||+.+++.+.+
T Consensus 165 ~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 165 GILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp EEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 355666666777766652 22 223468889999 7777774 368999999999988888
Q ss_pred Eecc--CCceEEEEE--cCCCCEEEEEe------cCCeEEEEeCCCCCCCcccceEEEec-----------------CCe
Q psy18073 212 YQAH--DGHVRDVCF--LPDGSQFLSVG------IDNTIKTWSSELSESDHIVPLHTIIS-----------------KSV 264 (639)
Q Consensus 212 ~~~h--~~~V~~v~~--sp~~~~l~s~s------~Dg~i~iwd~~~~~~~~~~~~~~~~~-----------------~~~ 264 (639)
+..- ......+.| +|+++++..++ .+++|.+|..+.+. ........... ...
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCc
Confidence 8642 134556666 99999888776 46688877665321 10000000000 245
Q ss_pred eEEeeecCCCCEEEEcCC---eeEEEeCCCC---ceeeeeecCC--------------ccEEEEEEcCCCCcEEEEEe
Q psy18073 265 ISSISHQRKSKIFATCGD---QCQLWEHERN---EPIRAFSWNV--------------DSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 265 v~~~~~~~~~~~l~~~~~---~i~vwd~~~~---~~~~~~~~h~--------------~~v~~v~~sp~~~~~l~s~s 322 (639)
...+.+++|+++|.++.. .|.+||+... +.+..+.... +.-..++++| ++++|+++.
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp-DGk~LyVaN 399 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISR-DGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECT-TSSEEEEEC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcC-CCCEEEEEc
Confidence 778999999998887763 9999998633 3444443220 1357899999 777777776
No 273
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.00065 Score=64.19 Aligned_cols=140 Identities=9% Similarity=0.022 Sum_probs=82.6
Q ss_pred eEEEeeCCCcEEEEeCCCCce-----EEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEEEeCCCCCCCcccceEEEe-
Q psy18073 188 TIISGAYDGEVKVWNLTSQSC-----VQTYQAHDGHVRDVCFLPDGSQFL-SVGIDNTIKTWSSELSESDHIVPLHTII- 260 (639)
Q Consensus 188 ~l~sgs~dg~i~vWd~~~~~~-----~~~~~~h~~~V~~v~~sp~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~~~~~~~- 260 (639)
.|..+.. +.|+.+++..... ...+......+..++|++++..|+ +-..++.|..+|+...... ....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-----~~~~~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-----TIIRQ 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-----EEECT
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-----EEEEC
Confidence 4444443 4788888865432 112222234578999999665554 5556789999998754321 1111
Q ss_pred cCCeeEEeeecCCCCEE-EEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC--CCcEEEEECC
Q psy18073 261 SKSVISSISHQRKSKIF-ATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS--DRSIILYDTR 333 (639)
Q Consensus 261 ~~~~v~~~~~~~~~~~l-~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~--Dg~i~iwd~~ 333 (639)
.......+++++++..+ ++.. +.|.+++.+.................++++|+++.+.++... .+.|..+++.
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 12467889999865444 4433 289999987543322222222466899999944554454433 3567777654
No 274
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.10 E-value=0.00027 Score=70.73 Aligned_cols=144 Identities=7% Similarity=-0.034 Sum_probs=91.9
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccC---------CceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceE
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHD---------GHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLH 257 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~---------~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~ 257 (639)
..+..++.++.|..+|..+|+.+....... ..+.+. ...++..++.++.++.|..+|..+++..+...
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-- 130 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK-- 130 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe--
Confidence 567778889999999999999887765421 223222 12245678888899999999999887643222
Q ss_pred EEecCCeeEEeeecCCCCEEEEcC-CeeEEEeCCCCceeeeeecCCccE-----EEEEEcCCCCcEEEEEeCCCcEEEEE
Q psy18073 258 TIISKSVISSISHQRKSKIFATCG-DQCQLWEHERNEPIRAFSWNVDSL-----HHVQFNPIDKHILASCASDRSIILYD 331 (639)
Q Consensus 258 ~~~~~~~v~~~~~~~~~~~l~~~~-~~i~vwd~~~~~~~~~~~~h~~~v-----~~v~~sp~~~~~l~s~s~Dg~i~iwd 331 (639)
....+.......++.+++... +.+..+|..+|+.+.......... ...... +..++.++.+|.|..+|
T Consensus 131 ---~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 131 ---VAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp ---CSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTEEEEEE
T ss_pred ---CCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCEEEEEE
Confidence 122221111112444444443 489999999999887776532211 111222 34577788899999999
Q ss_pred CCCccccC
Q psy18073 332 TRATVLSR 339 (639)
Q Consensus 332 ~~~~~~~~ 339 (639)
..+++..-
T Consensus 205 ~~tG~~~w 212 (376)
T 3q7m_A 205 MEQGQMIW 212 (376)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEE
Confidence 99887653
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.03 E-value=9.7e-05 Score=79.95 Aligned_cols=105 Identities=9% Similarity=0.049 Sum_probs=66.8
Q ss_pred CCcEEEEeCCCCceEEEEecc--C-----------------------------CceEEEEEcCCCCEEEEEecCC-----
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAH--D-----------------------------GHVRDVCFLPDGSQFLSVGIDN----- 238 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h--~-----------------------------~~V~~v~~sp~~~~l~s~s~Dg----- 238 (639)
+|.|..+|..+|+.+..+... . .....++++|++..++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999998877521 0 0112468888888888887766
Q ss_pred --------------eEEEEeCCCCCCCcccceEEE-----ecCCeeEEeeecCCCC---EEEEcCC--eeEEEeCCCCce
Q psy18073 239 --------------TIKTWSSELSESDHIVPLHTI-----ISKSVISSISHQRKSK---IFATCGD--QCQLWEHERNEP 294 (639)
Q Consensus 239 --------------~i~iwd~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~~--~i~vwd~~~~~~ 294 (639)
.|.-+|..+++..+....... ..........+..++. .++.++. .+.++|..+|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 499999999886543322100 0001121222223554 4555553 999999999998
Q ss_pred eeeee
Q psy18073 295 IRAFS 299 (639)
Q Consensus 295 ~~~~~ 299 (639)
+...+
T Consensus 337 l~~~~ 341 (668)
T 1kv9_A 337 ISAEK 341 (668)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 75543
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.02 E-value=0.0023 Score=62.12 Aligned_cols=157 Identities=8% Similarity=-0.072 Sum_probs=97.4
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC----CceEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEeCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS----QSCVQTYQAHDGHVRDVCFLPDG-SQFLSVGIDNTIKTWSSEL 247 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~----~~~~~~~~~h~~~V~~v~~sp~~-~~l~s~s~Dg~i~iwd~~~ 247 (639)
...+..++|++.+..++++-..++.|..+++.+ ......+...-.....+++.+.+ +..++-...+.|.+.|+..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 346789999986536667777789999999876 22222233223456889998754 4455656788999999874
Q ss_pred CCCCcccceEEEecCCeeEEeeecCCCC-EEEEcC---CeeEEEeCCCCceeeee-ecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQRKSK-IFATCG---DQCQLWEHERNEPIRAF-SWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~vwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
.... ............++++|.+. ++.+.. +.|...+++. .....+ ...-....+++++|+++.+.++-+
T Consensus 109 ~~~~----~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 109 VKRK----TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp SSEE----EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CceE----EEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 3211 11111234678899998554 444432 2677777753 333333 223456789999985566666666
Q ss_pred CCCcEEEEECCC
Q psy18073 323 SDRSIILYDTRA 334 (639)
Q Consensus 323 ~Dg~i~iwd~~~ 334 (639)
..+.|..+|+..
T Consensus 184 ~~~~I~~~d~dg 195 (316)
T 1ijq_A 184 KLHSISSIDVNG 195 (316)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCeEEEEecCC
Confidence 677899988753
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.00 E-value=0.0033 Score=63.15 Aligned_cols=159 Identities=8% Similarity=-0.071 Sum_probs=100.6
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC----ceEEEEeccCCceEEEEEcC-CCCEEEEEecCCeEEEEeCC
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----SCVQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSE 246 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~----~~~~~~~~h~~~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~ 246 (639)
....+..++|++.+..+..+-...+.|+.+++... .....+.........+++.+ .+++.++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34578899999865366666667789999998652 23333333445678999988 45555566677899999987
Q ss_pred CCCCCcccceEEEecCCeeEEeeecCCCC-EEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 247 LSESDHIVPLHTIISKSVISSISHQRKSK-IFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
..... ......-.....++++|.+. ++.+-. ..|...+++...........-....+|+++|.++.+.++-+
T Consensus 190 g~~~~----~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 190 GVKRK----TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TCSEE----EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCceE----EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 53211 11111234578899998554 444432 26888887654443333434457789999985555555555
Q ss_pred CCCcEEEEECCC
Q psy18073 323 SDRSIILYDTRA 334 (639)
Q Consensus 323 ~Dg~i~iwd~~~ 334 (639)
..+.|...|+..
T Consensus 266 ~~~~I~~~d~dG 277 (400)
T 3p5b_L 266 KLHSISSIDVNG 277 (400)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCEEEEEeCCC
Confidence 667888888753
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.91 E-value=0.00023 Score=77.03 Aligned_cols=113 Identities=11% Similarity=0.129 Sum_probs=73.6
Q ss_pred EEEECC-CCCeeEEEeeCCC-----------cEEEEeCCCCc--eEEEEe-ccCCceEEEEEcCCCCEEEEEec-CCeEE
Q psy18073 178 CLAKHP-TKLSTIISGAYDG-----------EVKVWNLTSQS--CVQTYQ-AHDGHVRDVCFLPDGSQFLSVGI-DNTIK 241 (639)
Q Consensus 178 ~l~~sp-~~~~~l~sgs~dg-----------~i~vWd~~~~~--~~~~~~-~h~~~V~~v~~sp~~~~l~s~s~-Dg~i~ 241 (639)
.+++.| +| ++++.|+.++ .+.+||..+++ .+..+. .+.....++++.++++.++.||. +..+.
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 556667 77 8888887653 58899988764 333332 23344456788899999999984 56899
Q ss_pred EEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC--------CeeEEEeCCCCce
Q psy18073 242 TWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG--------DQCQLWEHERNEP 294 (639)
Q Consensus 242 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~i~vwd~~~~~~ 294 (639)
+||..+..-.. ...+.....-.+++..+++++++.|+ ..+.+||..+++-
T Consensus 269 ~yd~~t~~W~~---~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 269 LYDSSSDSWIP---GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEGGGTEEEE---CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred EecCcCCceeE---CCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 99988643211 11111111223445567889988887 2689999987753
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.90 E-value=0.0044 Score=60.99 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=94.4
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEEEeCCCCCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL-SVGIDNTIKTWSSELSESD 251 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~-s~s~Dg~i~iwd~~~~~~~ 251 (639)
.+..+|.+..++. .++++- ...|+..++........+.+ ...+..++|++.+..|. +-...+.|..+++......
T Consensus 33 ~d~~~C~~~~~~~-~ll~~~--~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 33 PDRRSCKALGPEP-VLLFAN--RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TTSSCEEESSSCC-EEEEEC--BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCCcccccccCc-eeEeec--ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 3455677777754 444443 34688888876655444443 34578999997655554 5556789999998864321
Q ss_pred cccceEEEecCCeeEEeeecCCC-CEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC-CcE
Q psy18073 252 HIVPLHTIISKSVISSISHQRKS-KIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD-RSI 327 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D-g~i 327 (639)
............+++.+.+ .++.+-. +.|.+.+++.......+........+++++|.++.++++-... +.|
T Consensus 109 ----~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 109 ----EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp ----EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ----EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 1111112345678888754 4444433 2899999875544333434445678999999566666665545 667
Q ss_pred EEEECC
Q psy18073 328 ILYDTR 333 (639)
Q Consensus 328 ~iwd~~ 333 (639)
...++.
T Consensus 185 ~r~~~d 190 (349)
T 3v64_C 185 EASSMD 190 (349)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 777764
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.90 E-value=0.0036 Score=60.65 Aligned_cols=156 Identities=6% Similarity=-0.110 Sum_probs=98.2
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce-EEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEeCCCCCCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC-VQTYQAHDGHVRDVCFLPD-GSQFLSVGIDNTIKTWSSELSESD 251 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~-~~~~~~h~~~V~~v~~sp~-~~~l~s~s~Dg~i~iwd~~~~~~~ 251 (639)
..+.+++|++.+..+..+-...+.|..++...+.. ...+...-.....+++.+. +.+.++-...+.|.+.++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 35678999986536777777788999999876632 1222222345678999874 455556667789999998753221
Q ss_pred cccceEEEecCCeeEEeeecCCCC-EEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcE
Q psy18073 252 HIVPLHTIISKSVISSISHQRKSK-IFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i 327 (639)
......-.....++++|.+. ++.+-. ..|...+++...........-....+++++|+++.+.++-+..+.|
T Consensus 115 ----~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 115 ----VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp ----EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ----EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEE
Confidence 11112234678899998644 444432 2677777764332222233334568999999556666665667788
Q ss_pred EEEECC
Q psy18073 328 ILYDTR 333 (639)
Q Consensus 328 ~iwd~~ 333 (639)
..+|+.
T Consensus 191 ~~~d~d 196 (318)
T 3sov_A 191 HKSNLD 196 (318)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 888875
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.85 E-value=0.00013 Score=78.88 Aligned_cols=108 Identities=14% Similarity=0.121 Sum_probs=69.2
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCCc----------e-EEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGH----------V-RDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVP 255 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~----------V-~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 255 (639)
..++.++.++.|.-+|..+|+.+..+...... + ..+++ ++..++.++.|+.|..+|..+++..+...
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 46677778899999999999998887543211 0 11222 35678888899999999999988764433
Q ss_pred eEEEecCCeeEEeeecC---CCCEEEEcC-------CeeEEEeCCCCceeeeee
Q psy18073 256 LHTIISKSVISSISHQR---KSKIFATCG-------DQCQLWEHERNEPIRAFS 299 (639)
Q Consensus 256 ~~~~~~~~~v~~~~~~~---~~~~l~~~~-------~~i~vwd~~~~~~~~~~~ 299 (639)
... ......+..+| ++.+++..+ +.|..+|.++|+.+..+.
T Consensus 145 ~~~---~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 145 TTD---PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp CSC---TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred cCC---CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 210 00001111111 444444432 479999999999888775
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.85 E-value=0.00025 Score=74.99 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=35.4
Q ss_pred ceEEeccCCceEEEecCCccccceeeeeeccc-cccccccCCccccccccccccc
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGH-VRDTSTRPAVETTDLTRSFGWE 487 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~-v~~v~~spdg~~~~~~~~~~~~ 487 (639)
..++.++.||.|+.||.++|+.+.+++..... ...+.+.++|..+. ....|+.
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv-~~~~G~~ 529 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI-GSMYGVG 529 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE-EEEECCC
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE-EEECCCC
Confidence 56777899999999999999999988744321 22334557776443 3333444
No 283
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.83 E-value=0.0023 Score=71.00 Aligned_cols=158 Identities=8% Similarity=0.111 Sum_probs=106.5
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec--------cCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA--------HDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~--------h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd 244 (639)
...|.++...++| . |-.|+.++-|..||..+++....... ....|.++...++|+.|..|+.++-|.++|
T Consensus 356 ~~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 356 DNVVSCIVEDKDK-N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp CSSEEEEEECTTS-C-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEECCCC-C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 3569999999987 4 55577777899999877654432211 246799999988888566677777899999
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeec------CCccEEEEEEcCCCCcEE
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSW------NVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~------h~~~v~~v~~sp~~~~~l 318 (639)
..++................|.++...+++.+.++..+.+.+||..+++....... ....|.++...+ ++.+.
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lW 512 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLW 512 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEE
Confidence 88754211100000012357889999999988777767899999887754332211 235789999988 66655
Q ss_pred EEEeCCCcEEEEECCCc
Q psy18073 319 ASCASDRSIILYDTRAT 335 (639)
Q Consensus 319 ~s~s~Dg~i~iwd~~~~ 335 (639)
+.. . +-|..||..++
T Consensus 513 igt-~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 513 IGG-E-EGLSVFKQEGL 527 (795)
T ss_dssp EEE-S-SCEEEEEEETT
T ss_pred EEe-C-CceEEEeCCCC
Confidence 543 4 45888887654
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=0.0053 Score=62.33 Aligned_cols=152 Identities=11% Similarity=0.169 Sum_probs=95.7
Q ss_pred cEEEEEECC-CCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEec-CC----eEEEEeCCCC
Q psy18073 175 GISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI-DN----TIKTWSSELS 248 (639)
Q Consensus 175 ~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~-Dg----~i~iwd~~~~ 248 (639)
....|+++| ++ ..|..+...+.|+.+|+.++.... +.........|+|+++++.|+.+.. ++ .+...+. .+
T Consensus 138 ~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 457899998 34 445555444889999987766444 3334556889999999996665553 22 2333333 22
Q ss_pred CCCcccceEEEecCCeeEEeeecC-CCCEEEEcC--CeeEEEeCCCCceeeeeec-CCccEEEEEEcCCCCc-EEEEEeC
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQR-KSKIFATCG--DQCQLWEHERNEPIRAFSW-NVDSLHHVQFNPIDKH-ILASCAS 323 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~i~vwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~-~l~s~s~ 323 (639)
.... ...+........++++| ++.++++-. +.|..+|...+........ .......++|+| +++ ++++-..
T Consensus 215 ~~~~---~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p-dG~~lyv~d~~ 290 (430)
T 3tc9_A 215 GFKV---ITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP-SGNYAYIVVVN 290 (430)
T ss_dssp TSCS---EEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT-TSSEEEEEETT
T ss_pred ceee---eeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC-CCCEEEEEECC
Confidence 2211 12222334567888999 677666643 3899999887654222221 223467899999 676 5666566
Q ss_pred CCcEEEEECC
Q psy18073 324 DRSIILYDTR 333 (639)
Q Consensus 324 Dg~i~iwd~~ 333 (639)
.+.|..++..
T Consensus 291 ~~~I~~~~~d 300 (430)
T 3tc9_A 291 QHYILRSDYD 300 (430)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 7889988765
No 285
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.79 E-value=0.0032 Score=61.27 Aligned_cols=140 Identities=9% Similarity=-0.002 Sum_probs=85.1
Q ss_pred ccEEEEEECC-CCCeeEEEeeCCCcEEEEeCCCCceEEEEec-----cCCceEEEEEcC-CCCEEEEEec----------
Q psy18073 174 DGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-----HDGHVRDVCFLP-DGSQFLSVGI---------- 236 (639)
Q Consensus 174 ~~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-----h~~~V~~v~~sp-~~~~l~s~s~---------- 236 (639)
..+..+++.+ +| .++++ ...+.|..+|..++.. ..+.. .......+++.+ +|+..++-..
T Consensus 80 ~~p~gi~~~~~~g-~l~v~-d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 80 GRTYDISYNLQNN-QLYIV-DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp CCEEEEEEETTTT-EEEEE-ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHH
T ss_pred CCCceEEEcCCCC-cEEEE-ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccce
Confidence 3578999998 66 55554 3345588889765542 22211 123478899999 9987776532
Q ss_pred -------CCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEc-C--CeeEEEeCCCCc--eeeeeecCCcc
Q psy18073 237 -------DNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATC-G--DQCQLWEHERNE--PIRAFSWNVDS 304 (639)
Q Consensus 237 -------Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~--~~i~vwd~~~~~--~~~~~~~h~~~ 304 (639)
++.|..+|..++... .....-.....+++++++..+..+ . +.|.+|++.... ....+....+
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~~~-----~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g- 230 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKETT-----LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN- 230 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTEEE-----EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-
T ss_pred ehcccCCCceEEEEeCCCCEEE-----EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-
Confidence 367888887654321 111112345678999999854443 2 389999987532 1122221223
Q ss_pred EEEEEEcCCCCcEEEEEeC
Q psy18073 305 LHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 305 v~~v~~sp~~~~~l~s~s~ 323 (639)
...+++.+ ++++.++...
T Consensus 231 P~gi~~d~-~G~l~va~~~ 248 (322)
T 2fp8_A 231 PGNIKRNA-DGHFWVSSSE 248 (322)
T ss_dssp EEEEEECT-TSCEEEEEEE
T ss_pred CCCeEECC-CCCEEEEecC
Confidence 67889998 6676666543
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.78 E-value=0.00049 Score=72.87 Aligned_cols=48 Identities=19% Similarity=0.166 Sum_probs=35.9
Q ss_pred ceEEeccCCceEEEecCCccccceeeeeecccc-ccccccCCccccccc
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV-RDTSTRPAVETTDLT 481 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v-~~v~~spdg~~~~~~ 481 (639)
.+++.|+.||.++.||.++|+.+.+++...+.. .-+.+..+|+.+...
T Consensus 498 glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 498 NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 577779999999999999999999987654322 236677888654433
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.76 E-value=0.0038 Score=62.49 Aligned_cols=151 Identities=9% Similarity=-0.013 Sum_probs=91.5
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCcc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSELSESDHI 253 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~~~~~~~ 253 (639)
.-+|.+..+.+ .++++ . ...|+..++..+.....+.+ ...+..++|++.+..| ++-...+.|..+++......
T Consensus 78 ~~~C~~~~~~~-~l~~~-~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-- 151 (386)
T 3v65_B 78 RRSCKALGPEP-VLLFA-N-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-- 151 (386)
T ss_dssp SSCEEECSSCC-EEEEE-C-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE--
T ss_pred CCeECCccccc-eeEee-c-CccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE--
Confidence 34566666644 34433 3 35789999877665544443 4457899999755544 45556789999998854321
Q ss_pred cceEEEecCCeeEEeeecCCC-CEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC-CcEEE
Q psy18073 254 VPLHTIISKSVISSISHQRKS-KIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD-RSIIL 329 (639)
Q Consensus 254 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D-g~i~i 329 (639)
............+++++.+ .++.+-.. .|.+.+++.......+........+++++|.++.++++-... +.|..
T Consensus 152 --~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 152 --EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp --EEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred --EEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 0011112345678888754 44444332 788888875544333444446678999998556566554444 66777
Q ss_pred EECC
Q psy18073 330 YDTR 333 (639)
Q Consensus 330 wd~~ 333 (639)
.++.
T Consensus 230 ~~~d 233 (386)
T 3v65_B 230 SSMD 233 (386)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6654
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.65 E-value=0.00092 Score=70.70 Aligned_cols=47 Identities=11% Similarity=0.092 Sum_probs=34.4
Q ss_pred ceEEeccCCceEEEecCCccccceeeeeeccc-cccccccCCcccccc
Q psy18073 434 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGH-VRDTSTRPAVETTDL 480 (639)
Q Consensus 434 ~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~-v~~v~~spdg~~~~~ 480 (639)
.+++.|+.||.++.||.++|+.+.+++...+. ..-+.+..||+.+..
T Consensus 485 g~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 485 DLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (599)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEE
Confidence 56777899999999999999999988654332 233556678865433
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.65 E-value=0.011 Score=64.66 Aligned_cols=158 Identities=8% Similarity=-0.089 Sum_probs=100.0
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCC----ceEEEEeccCCceEEEEEcCCCC-EEEEEecCCeEEEEeCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----SCVQTYQAHDGHVRDVCFLPDGS-QFLSVGIDNTIKTWSSEL 247 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~----~~~~~~~~h~~~V~~v~~sp~~~-~l~s~s~Dg~i~iwd~~~ 247 (639)
...+..|+|++.+..++++-...+.|+.+++... .....+.........|++.+.++ +.++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4567899999855366677777788999998653 22333433445677899988665 445556778999999874
Q ss_pred CCCCcccceEEEecCCeeEEeeecCCC-CEEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQRKS-KIFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS 323 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~ 323 (639)
.... ......-.....|+++|.+ .++.+-. ..|.+.++........+...-....+|++++.++.+.++-..
T Consensus 503 ~~~~----~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 503 VKRK----TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp SSEE----EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CeEE----EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 3211 1111223467899999974 4444432 268888887554444444444678899999855655555555
Q ss_pred CCcEEEEECCC
Q psy18073 324 DRSIILYDTRA 334 (639)
Q Consensus 324 Dg~i~iwd~~~ 334 (639)
.+.|...|+..
T Consensus 579 ~~~I~~~d~dG 589 (791)
T 3m0c_C 579 LHSISSIDVNG 589 (791)
T ss_dssp TTEEEEEETTS
T ss_pred CCcEEEEecCC
Confidence 66788888753
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.65 E-value=0.014 Score=59.10 Aligned_cols=151 Identities=13% Similarity=0.101 Sum_probs=92.8
Q ss_pred cEEEEEECCC---CCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecC---Ce-EEEEeCCC
Q psy18073 175 GISCLAKHPT---KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGID---NT-IKTWSSEL 247 (639)
Q Consensus 175 ~V~~l~~sp~---~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D---g~-i~iwd~~~ 247 (639)
....++|+|+ | .+.++-.. +.|+.+|..++.... +.........++|+++|+++++.... .. +...+...
T Consensus 140 ~P~gvavd~~s~~g-~Lyv~D~~-~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYD-DLYWVGQR-DAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTC-EEEEECBT-SCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCC-EEEEEeCC-CCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 4678999995 5 55554333 899999988776554 33345568999999999955544321 12 32333221
Q ss_pred CCCCcccceEEEecCCeeEEeeecC-CCCEEEEcCC--eeEEEeCCCCceeeee-ec-CCccEEEEEEcCCCCc-EEEEE
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQR-KSKIFATCGD--QCQLWEHERNEPIRAF-SW-NVDSLHHVQFNPIDKH-ILASC 321 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~--~i~vwd~~~~~~~~~~-~~-h~~~v~~v~~sp~~~~-~l~s~ 321 (639)
.... ............++++| ++.++++-.. .|..+|..++.....+ .. ....-..++|+| +++ +.++-
T Consensus 217 -~~~~---~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp-dG~~LYvad 291 (433)
T 4hw6_A 217 -GFTE---RLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP-TGDWAYIIY 291 (433)
T ss_dssp -TTCC---EEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT-TSSEEEEEE
T ss_pred -Ceec---cccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC-CCCEEEEEe
Confidence 1110 11222334567788999 6776666543 7999998877653332 21 122335799999 666 55665
Q ss_pred eCCCcEEEEECC
Q psy18073 322 ASDRSIILYDTR 333 (639)
Q Consensus 322 s~Dg~i~iwd~~ 333 (639)
...+.|+.+|..
T Consensus 292 ~~~~~I~~~~~d 303 (433)
T 4hw6_A 292 NGKHCIYRVDYN 303 (433)
T ss_dssp TTTTEEEEEEBC
T ss_pred CCCCEEEEEeCC
Confidence 667889988865
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.62 E-value=0.00017 Score=78.29 Aligned_cols=155 Identities=8% Similarity=-0.045 Sum_probs=91.8
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCC----CceEEEEeccCCceEEEEEcCC-CCEEEEEecCCeEEEEeCCCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTS----QSCVQTYQAHDGHVRDVCFLPD-GSQFLSVGIDNTIKTWSSELS 248 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~----~~~~~~~~~h~~~V~~v~~sp~-~~~l~s~s~Dg~i~iwd~~~~ 248 (639)
..+..++|++.+..++++-...+.|+.+++.+ ......+.........|++.+. ++++++-...+.|.+.++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 35678999987635555555678999999875 2222222212223567888754 455555566788999998753
Q ss_pred CCCcccceEEEe--cCCeeEEeeecCCCC-EEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 249 ESDHIVPLHTII--SKSVISSISHQRKSK-IFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 249 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~-~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
.. ..+. .......++++|.+. ++.+-. +.|.++++........+...-....+|+|+|+++.+.++-+
T Consensus 486 ~~------~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 486 KR------KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CE------EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred ce------EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 21 1111 123567888998654 444332 26777766543322222222345578999996667777766
Q ss_pred CCCcEEEEECCC
Q psy18073 323 SDRSIILYDTRA 334 (639)
Q Consensus 323 ~Dg~i~iwd~~~ 334 (639)
..+.|..+|+..
T Consensus 560 ~~~~I~~~d~dG 571 (699)
T 1n7d_A 560 KLHSISSIDVNG 571 (699)
T ss_dssp TTTEEEEECSSS
T ss_pred CCCeEEEEccCC
Confidence 777888888753
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.0046 Score=57.21 Aligned_cols=196 Identities=7% Similarity=0.073 Sum_probs=115.9
Q ss_pred EEeccCCceEEEEEcCCCCEEE-EEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEE
Q psy18073 211 TYQAHDGHVRDVCFLPDGSQFL-SVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLW 287 (639)
Q Consensus 211 ~~~~h~~~V~~v~~sp~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vw 287 (639)
.+.+-.+.+..++|+|++..|+ +...++.|...|.. ++..... .+........+++.+++.++++..+ .+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i---~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI---PLDFVKDLETIEYIGDNQFVISDERDYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE---ECSSCSSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE---ecCCCCChHHeEEeCCCEEEEEECCCCcEEEE
Confidence 3456667899999999776555 46678888888887 4432221 1123357788899999887666433 78888
Q ss_pred eCCCCce---eeeee------cCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCccccccccccccccccCC
Q psy18073 288 EHERNEP---IRAFS------WNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRN 358 (639)
Q Consensus 288 d~~~~~~---~~~~~------~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (639)
++..... +.... .......+++|+| .++.|.++.......+|.+. +..- .. .
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~-g~~~-~~-------~--------- 157 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVN-GLLS-SN-------E--------- 157 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEE-STTC-SS-------C---------
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEc-cccc-CC-------c---------
Confidence 8765442 22221 1234568999999 55555555555555666554 2100 00 0
Q ss_pred CCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeeccccccccccccccccccCcccceeEEeeCCCCcceEEe
Q psy18073 359 IDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIIS 438 (639)
Q Consensus 359 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s 438 (639)
+.. ..+.. +. . ..+...+.+++++|...++++.
T Consensus 158 ----------------------------l~i------------~~~~~-~~----~--~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 158 ----------------------------LHI------------SKDKA-LQ----R--QFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp ----------------------------CEE------------EECHH-HH----H--TCCSSCCCEEEEETTTTEEEEE
T ss_pred ----------------------------eee------------ecchh-hc----c--ccccCCceeEEEcCCCCeEEEE
Confidence 000 00000 00 0 0122346889999977577777
Q ss_pred ccCCceEEEecCCccccceeeeeec---------cccccccccCCccc
Q psy18073 439 GAYDGEVKVWNLTSQSCVQTYQAHD---------GHVRDTSTRPAVET 477 (639)
Q Consensus 439 gs~Dg~v~iWd~~~~~~~~~l~~h~---------~~v~~v~~spdg~~ 477 (639)
....+.|.+.|.. |+.+..+.-.. ..--.|+|.|+|..
T Consensus 191 S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l 237 (255)
T 3qqz_A 191 SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI 237 (255)
T ss_dssp ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE
T ss_pred ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCE
Confidence 7788899999965 55555543221 13467899999964
No 293
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.58 E-value=0.011 Score=65.48 Aligned_cols=157 Identities=6% Similarity=0.084 Sum_probs=102.4
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec-------cCCceEEEEEcCCCCEEEEEecCCeEEEEeC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA-------HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-------h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~ 245 (639)
...|.++...++| . |-.|+.++-|..|+..++... .+.. ....|.++...++|.+.+ |+.++-|..||.
T Consensus 309 ~~~i~~i~~D~~g-~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQG-G-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTS-C-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECT
T ss_pred CCcEEEEEEeCCc-C-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcC
Confidence 3579999999988 3 556777778999987654432 2211 245699999988887554 666767999998
Q ss_pred CCCCCCcccceE-E---EecCCeeEEeeecCCCC-EEEEcC-CeeEEEeCCCCceeeeee----cCCccEEEEEEcCCCC
Q psy18073 246 ELSESDHIVPLH-T---IISKSVISSISHQRKSK-IFATCG-DQCQLWEHERNEPIRAFS----WNVDSLHHVQFNPIDK 315 (639)
Q Consensus 246 ~~~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~-~l~~~~-~~i~vwd~~~~~~~~~~~----~h~~~v~~v~~sp~~~ 315 (639)
.++......... . ......|.++...+++. +.+... +.+..+|..+++...... .+...|.++...+ ++
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g 463 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EG 463 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SS
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CC
Confidence 764321110000 0 01235788999888888 555544 589999998776433221 2345799999888 66
Q ss_pred cEEEEEeCCCcEEEEECCCcc
Q psy18073 316 HILASCASDRSIILYDTRATV 336 (639)
Q Consensus 316 ~~l~s~s~Dg~i~iwd~~~~~ 336 (639)
.+.+. +.+ -+.+||..+++
T Consensus 464 ~lwig-t~~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 464 NLWLG-TLS-ALVRFNPEQRS 482 (795)
T ss_dssp CEEEE-ESS-CEEEEETTTTE
T ss_pred CEEEE-ecC-ceeEEeCCCCe
Confidence 65554 344 58889977653
No 294
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.0067 Score=67.14 Aligned_cols=155 Identities=8% Similarity=0.078 Sum_probs=100.8
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEE---eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY---QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES 250 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~---~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~ 250 (639)
..|.++...++| . |-.|+.++-|..||..++...... ......|.++...++|.+.+ |+.++-|..+|..++..
T Consensus 363 ~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 363 KVVSSVCDDGQG-K-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SCEEEEEECTTS-C-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred cceEEEEEcCCC-C-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 569999999887 3 555666667889997654322111 12346799999988887655 66666788898876432
Q ss_pred CcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecC-----CccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 251 DHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWN-----VDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
...... ......|.++...+++.+.+...+.+..+|..+++........ ...|.++...+ ++.+.+ |+.++
T Consensus 440 ~~~~~~--~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWi-gt~~~ 515 (781)
T 3v9f_A 440 QIIELE--KNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-EGRFWI-GTFGG 515 (781)
T ss_dssp EECCST--TTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-TCCEEE-EESSS
T ss_pred EEeccC--CCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcC-CCCEEE-EEcCC
Confidence 110000 0123578889889888887776678999998877654332222 36789999888 666554 44434
Q ss_pred cEEEEECCCc
Q psy18073 326 SIILYDTRAT 335 (639)
Q Consensus 326 ~i~iwd~~~~ 335 (639)
-|..||..++
T Consensus 516 Gl~~~~~~~~ 525 (781)
T 3v9f_A 516 GVGIYTPDMQ 525 (781)
T ss_dssp CEEEECTTCC
T ss_pred CEEEEeCCCC
Confidence 4777887654
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.56 E-value=0.0018 Score=61.64 Aligned_cols=158 Identities=13% Similarity=0.196 Sum_probs=101.6
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc-----C--CceEEEEE---cCCCCEEEEEec--------
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-----D--GHVRDVCF---LPDGSQFLSVGI-------- 236 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-----~--~~V~~v~~---sp~~~~l~s~s~-------- 236 (639)
.--+++|++....++++.-..|+|..||...+........+ . ..+..|.| .|+++++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34578898865255555558999999998766543332211 1 13689999 688877775432
Q ss_pred -----CCeEEEEeCC---CCCCCcccceEEEe---------cCCeeEEeeecCCCCEEEEcCC---eeEEEeCCCCceee
Q psy18073 237 -----DNTIKTWSSE---LSESDHIVPLHTII---------SKSVISSISHQRKSKIFATCGD---QCQLWEHERNEPIR 296 (639)
Q Consensus 237 -----Dg~i~iwd~~---~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~---~i~vwd~~~~~~~~ 296 (639)
++.|..+|+. +++..+...+.... .......++..++|+..++++. .|...+.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 6789999999 66665333221111 1135889999999999987664 3444444422 222
Q ss_pred eeec------CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 297 AFSW------NVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 297 ~~~~------h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
.+.. .....++++++| ++++|+....+|.+.-+|+++
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred eeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 2211 112366899999 777777666699999999873
No 296
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.55 E-value=0.0026 Score=69.84 Aligned_cols=111 Identities=12% Similarity=-0.026 Sum_probs=71.3
Q ss_pred ceEEEEEc-CCCCEEEEEec-CC----eEEEEeCCCC-CCCcccceEEEecCCeeEEeeecCCCCEEEEcC-C------e
Q psy18073 218 HVRDVCFL-PDGSQFLSVGI-DN----TIKTWSSELS-ESDHIVPLHTIISKSVISSISHQRKSKIFATCG-D------Q 283 (639)
Q Consensus 218 ~V~~v~~s-p~~~~l~s~s~-Dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~------~ 283 (639)
.+...+|| |||++||-+.. +| +|+++|+.++ +... ..+. .....++|+||++.|+... + .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~-----~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVS-----GTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEE-----EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-cccc-----CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 67889999 99998885543 22 5999999987 5321 1111 1245788999997666543 1 5
Q ss_pred eEEEeCCCCce--eeeeec-CCccEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCc
Q psy18073 284 CQLWEHERNEP--IRAFSW-NVDSLHHVQFNPIDKHILASCAS---DRSIILYDTRAT 335 (639)
Q Consensus 284 i~vwd~~~~~~--~~~~~~-h~~~v~~v~~sp~~~~~l~s~s~---Dg~i~iwd~~~~ 335 (639)
|.++++.+++. ...+.. +.....++.|+| |+++|+..+. ...|.++|+.++
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCC
Confidence 77888877652 233332 234567889999 7776665543 234677777653
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.53 E-value=0.0043 Score=65.59 Aligned_cols=150 Identities=6% Similarity=-0.033 Sum_probs=91.2
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccC--C--ceEE-EEEcCCCCEEEEEec------CCeEEEEeCCCCCCCcccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHD--G--HVRD-VCFLPDGSQFLSVGI------DNTIKTWSSELSESDHIVP 255 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~--~--~V~~-v~~sp~~~~l~s~s~------Dg~i~iwd~~~~~~~~~~~ 255 (639)
..++.++.|+.|..+|..+|+.+....... . .+.+ -... ++ .++.++. ++.|..+|..+++..+...
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 467778889999999999999887764321 0 1211 0111 44 4555554 7999999999987654332
Q ss_pred eEEEe---------------------------------cCC-eeEEeeecCCCCEEEEcCC------------------e
Q psy18073 256 LHTII---------------------------------SKS-VISSISHQRKSKIFATCGD------------------Q 283 (639)
Q Consensus 256 ~~~~~---------------------------------~~~-~v~~~~~~~~~~~l~~~~~------------------~ 283 (639)
..... ... ....+++.++...+..+.+ .
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 21000 000 0012445554444433321 4
Q ss_pred eEEEeCCCCceeeeeecC----------CccEEEEEEcCCCC---cEEEEEeCCCcEEEEECCCccccCC
Q psy18073 284 CQLWEHERNEPIRAFSWN----------VDSLHHVQFNPIDK---HILASCASDRSIILYDTRATVLSRN 340 (639)
Q Consensus 284 i~vwd~~~~~~~~~~~~h----------~~~v~~v~~sp~~~---~~l~s~s~Dg~i~iwd~~~~~~~~~ 340 (639)
|..+|.++|+.+..++.. ..++. +...+ ++ ..++.++.+|.+.++|..+|+.+-.
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~ 341 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVA 341 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEEee
Confidence 889999999988877632 12222 22223 45 4677889999999999999987643
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.51 E-value=0.029 Score=54.17 Aligned_cols=136 Identities=10% Similarity=-0.023 Sum_probs=80.6
Q ss_pred CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCcccceEEEe-cCCeeEEeeecCC
Q psy18073 196 GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSELSESDHIVPLHTII-SKSVISSISHQRK 273 (639)
Q Consensus 196 g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 273 (639)
..|+..|+.+......+. ....+.+++|++++..| ++-..++.|..+++......... ..... .-.....+++++.
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C-EEEECSSCSCCCEEEEETT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCccc-EEEEeCCCCCcCEEEEeec
Confidence 469999998877655554 34567899999865544 45556789999998752100000 11111 1235678888864
Q ss_pred -CCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC-CcEEEEECC
Q psy18073 274 -SKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD-RSIILYDTR 333 (639)
Q Consensus 274 -~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D-g~i~iwd~~ 333 (639)
+.++++-. +.|.+.|.........+........+++++|.++.++++.... +.|...++.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 44444433 3899999875443333343445678999998555555554333 566666653
No 299
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.51 E-value=0.024 Score=54.47 Aligned_cols=120 Identities=12% Similarity=0.129 Sum_probs=78.2
Q ss_pred ceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--e-
Q psy18073 207 SCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--Q- 283 (639)
Q Consensus 207 ~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~- 283 (639)
+.+..+... .....++|+++++++++-..++.|..||.... . .........+..+++++++.++++..+ .
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~-----~~~~~~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-Q-----QIHATVEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-E-----EEEEECSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-e-----EEEEeCCCCceeEEEcCCCcEEEEeccCCcc
Confidence 444455432 45788999999997777778899999998742 1 122233457889999999997776532 3
Q ss_pred -eEEEeCCCCceeeeeec-CCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 284 -CQLWEHERNEPIRAFSW-NVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 284 -i~vwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
|..+|..+++....... .......++..+ ++..+++-..++.|..+|..+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTT
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCC
Confidence 66677777765432221 122345566555 566666655688888888764
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.48 E-value=0.035 Score=55.63 Aligned_cols=137 Identities=10% Similarity=-0.031 Sum_probs=82.9
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEE-EEecCCeEEEEeCCCCCCCcccceEEEe-cCCeeEEeeecC
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL-SVGIDNTIKTWSSELSESDHIVPLHTII-SKSVISSISHQR 272 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~-s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 272 (639)
...|+..|+........+. ....+..|+|++.+..|. +-...+.|..+++......... ..... .......+++.+
T Consensus 91 ~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~-~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCC-EEEECSSCSCEEEEEEET
T ss_pred cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcc-eEEEeCCCCCcccEEEEe
Confidence 3689999988765554444 456688999998655554 4456788999998752210000 11111 234677888887
Q ss_pred C-CCEEEEcCC--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeC-CCcEEEEECC
Q psy18073 273 K-SKIFATCGD--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCAS-DRSIILYDTR 333 (639)
Q Consensus 273 ~-~~~l~~~~~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~-Dg~i~iwd~~ 333 (639)
. +.++.+-.. .|.+.+++.......+........+++++|.++.++++-.. .+.|...++.
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 4 444444332 89999987665444444445567899999955555555322 3567776654
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.026 Score=62.33 Aligned_cols=158 Identities=12% Similarity=0.089 Sum_probs=98.7
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe--------------ccCCceEEEEEcCCCCEEEEEecCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ--------------AHDGHVRDVCFLPDGSQFLSVGIDN 238 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~--------------~h~~~V~~v~~sp~~~~l~s~s~Dg 238 (639)
...|.++...++| . |..|+..+-|.++|..++....... -....|.++...++|.+. .|+.++
T Consensus 257 ~~~i~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~ 333 (781)
T 3v9f_A 257 SSYIFSIKQLKDN-K-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGG 333 (781)
T ss_dssp CCCEEEEEECTTS-E-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSS
T ss_pred CceEEEEEECCCC-C-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCC
Confidence 3569999999888 4 4556664568889987665322111 134579999998888644 566667
Q ss_pred eEEEEeCCCCCCCcccceE------EEecCCeeEEeeecCCCCEEEEc-CCeeEEEeCCCCceeeee---ecCCccEEEE
Q psy18073 239 TIKTWSSELSESDHIVPLH------TIISKSVISSISHQRKSKIFATC-GDQCQLWEHERNEPIRAF---SWNVDSLHHV 308 (639)
Q Consensus 239 ~i~iwd~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~-~~~i~vwd~~~~~~~~~~---~~h~~~v~~v 308 (639)
-|..++..+..... .... .......|.++...+++.+.+.. ++.+..||..++...... ......|.++
T Consensus 334 Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i 412 (781)
T 3v9f_A 334 GINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS 412 (781)
T ss_dssp CEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE
T ss_pred eEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE
Confidence 78888877543211 1000 00123468899999888877766 457888998765432211 1234678999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCcc
Q psy18073 309 QFNPIDKHILASCASDRSIILYDTRATV 336 (639)
Q Consensus 309 ~~sp~~~~~l~s~s~Dg~i~iwd~~~~~ 336 (639)
...+ ++.+.+ |+.++-|..+|..+++
T Consensus 413 ~~d~-~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 413 LKDS-EGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp EECT-TSCEEE-EETTEEEEEECSSSCE
T ss_pred EECC-CCCEEE-EeccCCEEEEcCCCCc
Confidence 8887 565544 6666778888876653
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.33 E-value=0.05 Score=53.43 Aligned_cols=104 Identities=11% Similarity=0.099 Sum_probs=62.0
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce--EEEEe---ccCCceEEEEEcCC---CCEEEEE-ecC-----Ce
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC--VQTYQ---AHDGHVRDVCFLPD---GSQFLSV-GID-----NT 239 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~--~~~~~---~h~~~V~~v~~sp~---~~~l~s~-s~D-----g~ 239 (639)
..-..++|.|+| .++++ ..+|.|++++ +++. +..+. ........|+|+|+ +..|..+ ..+ +.
T Consensus 31 ~~P~~ia~~pdG-~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDG-GMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTS-CEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCC-eEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 356799999999 65555 5669999998 4442 22121 12346789999998 4454443 332 67
Q ss_pred EEEEeCCCCCCCcccce-EEEe----cCCeeEEeeecCCCCEEEEcC
Q psy18073 240 IKTWSSELSESDHIVPL-HTII----SKSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 240 i~iwd~~~~~~~~~~~~-~~~~----~~~~v~~~~~~~~~~~l~~~~ 281 (639)
|..++...........+ .... .......+++.|||.++++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 87888764211000011 1121 012346899999998888754
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.33 E-value=0.067 Score=56.96 Aligned_cols=156 Identities=7% Similarity=-0.084 Sum_probs=101.1
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEE-EEEecCCeEEEEeCCCCCCCc
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
..+..|+|++.+..+.++-..++.|..+++........+.........+++.+.+..| ++-...+.|.+.++......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~- 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ- 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-
Confidence 4578999999764666777778999999987654444343333457789998765544 55556788999998753221
Q ss_pred ccceEEEecCCeeEEeeecCC-CCEEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 253 IVPLHTIISKSVISSISHQRK-SKIFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
......-.....++++|. |.++.+-. ..|...+++..... .+-..-....++++++.++++.++-...+.|.
T Consensus 116 ---~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~ 191 (628)
T 4a0p_A 116 ---VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIE 191 (628)
T ss_dssp ---EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ---EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCEEEEEECCCCEEE
Confidence 111122245789999984 55555542 27777777654433 33334456789999995555666656677888
Q ss_pred EEECCC
Q psy18073 329 LYDTRA 334 (639)
Q Consensus 329 iwd~~~ 334 (639)
..|+..
T Consensus 192 ~~d~dG 197 (628)
T 4a0p_A 192 SSNMLG 197 (628)
T ss_dssp EEETTS
T ss_pred EEcCCC
Confidence 888754
No 304
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=97.30 E-value=1.4e-05 Score=76.22 Aligned_cols=27 Identities=33% Similarity=0.424 Sum_probs=24.5
Q ss_pred eccCCceeeeeeccceecCCcccccccCCeeeC
Q psy18073 607 FTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC 639 (639)
Q Consensus 607 ~~~~p~~l~~~l~rf~~~~~~~~~~k~~~~v~f 639 (639)
|.|||.+|+||+.|| +.+.||.++|.|
T Consensus 163 isrLP~yLtVq~vRF------gKkaKIlrkV~f 189 (374)
T 2vhf_A 163 FAEAPSCLIIQMPRF------GKDFKLFKKIFP 189 (374)
T ss_dssp ESSCCSEEEEECCCC------SSSSSCCCCCBC
T ss_pred eecCCcceEEeeecc------CccccccCCCCC
Confidence 999999999999999 366799999987
No 305
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.28 E-value=0.04 Score=60.21 Aligned_cols=137 Identities=8% Similarity=-0.071 Sum_probs=81.7
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCC-CEEEEEecCCeEEEEeCCCCCCCcccceEEEe-cCCeeEEeeecC
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG-SQFLSVGIDNTIKTWSSELSESDHIVPLHTII-SKSVISSISHQR 272 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~-~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 272 (639)
...|+..++........+. ....+.+|+|++.+ .++++-...+.|+.+++......... ..... .-.....|++.+
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~-~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C-EEEECSSCSCCCEEEEET
T ss_pred ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcce-eEEEecCCCCcceeeeee
Confidence 3568888887665544444 35567899999854 44555566788999998753210000 11111 224567888887
Q ss_pred CCCEEEEcC-C--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC-CcEEEEECC
Q psy18073 273 KSKIFATCG-D--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD-RSIILYDTR 333 (639)
Q Consensus 273 ~~~~l~~~~-~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D-g~i~iwd~~ 333 (639)
.+..|..+. + .|.+.++........+........+|+++|..+.++++-..+ +.|...++.
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 764444333 2 899999875554444444455688999999555555554333 567777664
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.26 E-value=0.073 Score=51.63 Aligned_cols=145 Identities=10% Similarity=0.116 Sum_probs=83.7
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcE-EEEeCCCCceEEEE-eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEV-KVWNLTSQSCVQTY-QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSES 250 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i-~vWd~~~~~~~~~~-~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~ 250 (639)
.+.+..+.+.+++ ..++.+. +|.| +-+| .|+.-... ..+...+..+++.|++.+++.+...+..+-+|-. +..
T Consensus 121 ~~~~~~i~~~~~~-~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~t 195 (327)
T 2xbg_A 121 PGSPRLIKALGNG-SAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTA 195 (327)
T ss_dssp SSCEEEEEEEETT-EEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSS
T ss_pred CCCeEEEEEECCC-CEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCc
Confidence 3457888887777 6666654 5554 3333 34322222 3456678999999998888766544444444431 111
Q ss_pred CcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeee-c---CCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 251 DHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFS-W---NVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~-~---h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
- . .........+..+++.+++.+++.+.+ .+.+.+.+.++.-..+. . +...+.++.+.+ ++.+++++ .+|
T Consensus 196 W-~--~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g-~~g 270 (327)
T 2xbg_A 196 W-E--PHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAG-GAG 270 (327)
T ss_dssp C-E--EEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEE-STT
T ss_pred e-e--ECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEe-CCC
Confidence 1 0 111223456788888999888877764 66665433233222222 1 223588999998 66666654 467
Q ss_pred cE
Q psy18073 326 SI 327 (639)
Q Consensus 326 ~i 327 (639)
.|
T Consensus 271 ~i 272 (327)
T 2xbg_A 271 AL 272 (327)
T ss_dssp CE
T ss_pred eE
Confidence 66
No 307
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.25 E-value=0.0047 Score=65.33 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=70.1
Q ss_pred eeEEEeeC-CCcEEEEeC-CCCceEEEEeccCCc-----------eEEEEEcCCCCE----EEEEecCCeEEEEeCCCCC
Q psy18073 187 STIISGAY-DGEVKVWNL-TSQSCVQTYQAHDGH-----------VRDVCFLPDGSQ----FLSVGIDNTIKTWSSELSE 249 (639)
Q Consensus 187 ~~l~sgs~-dg~i~vWd~-~~~~~~~~~~~h~~~-----------V~~v~~sp~~~~----l~s~s~Dg~i~iwd~~~~~ 249 (639)
..|..++. ++.|.-+|. .+|+.+-.+...... ...++++|.+.. ++.++.|+.|.-+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 35555666 899999999 899998877532211 123455443444 7888899999999999988
Q ss_pred CCcccceEEEecCCeeEE-eeecCCCCEEEEcC-------CeeEEEeCCCCceeeeeec
Q psy18073 250 SDHIVPLHTIISKSVISS-ISHQRKSKIFATCG-------DQCQLWEHERNEPIRAFSW 300 (639)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~~~~ 300 (639)
..+............+.+ ..+ .++.+++.++ +.|.-+|.++|+.+..+..
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 754432211000001111 111 1455555442 4899999999998877654
No 308
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.25 E-value=0.12 Score=52.68 Aligned_cols=158 Identities=8% Similarity=0.069 Sum_probs=94.6
Q ss_pred cEEEEEECCC-CCeeEEEeeCCCcEEEEeCCCCceEEEEecc---CCceEEEEE-------cCCCCEEEEEecCC-----
Q psy18073 175 GISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQTYQAH---DGHVRDVCF-------LPDGSQFLSVGIDN----- 238 (639)
Q Consensus 175 ~V~~l~~sp~-~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h---~~~V~~v~~-------sp~~~~l~s~s~Dg----- 238 (639)
....|+|+|. +.+++++-...+.|++.|..++........- ......++| +++++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999993 4255555555578999998877665444321 235899999 99999776665543
Q ss_pred --eEEEEeCCCCCCCcc-cceEEEecCCeeEEeeecCC-CCEEEEcCC--eeEEEeCC-------CCce-----------
Q psy18073 239 --TIKTWSSELSESDHI-VPLHTIISKSVISSISHQRK-SKIFATCGD--QCQLWEHE-------RNEP----------- 294 (639)
Q Consensus 239 --~i~iwd~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~--~i~vwd~~-------~~~~----------- 294 (639)
.|.+.+......... ..............++++|+ +.++++-.+ .|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266666433112210 10012222234567888994 555544443 79999987 5543
Q ss_pred eee-ee-cCCccEEEEEEcCCCCc-EEEEEeCCCcEEEEECC
Q psy18073 295 IRA-FS-WNVDSLHHVQFNPIDKH-ILASCASDRSIILYDTR 333 (639)
Q Consensus 295 ~~~-~~-~h~~~v~~v~~sp~~~~-~l~s~s~Dg~i~iwd~~ 333 (639)
... +. +.......++|+| +++ +.++-+....|+.+|..
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECSSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecC
Confidence 112 21 1234467899999 676 45555567788886643
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.18 E-value=0.064 Score=57.06 Aligned_cols=158 Identities=6% Similarity=-0.096 Sum_probs=96.6
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce-EEEEeccCCceEEEEEcCCCCE-EEEEecCCeEEEEeCCCCCC
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC-VQTYQAHDGHVRDVCFLPDGSQ-FLSVGIDNTIKTWSSELSES 250 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~-~~~~~~h~~~V~~v~~sp~~~~-l~s~s~Dg~i~iwd~~~~~~ 250 (639)
-..+..++|++.+..++++=...+.|..+++..... ...+..--.....+++.+.+.. .++-...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345789999986635556656678899999876532 2233333356889999985554 45556678999999875322
Q ss_pred CcccceEEEecCCeeEEeeecCC-CCEEEEcCC---eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCc
Q psy18073 251 DHIVPLHTIISKSVISSISHQRK-SKIFATCGD---QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRS 326 (639)
Q Consensus 251 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~---~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~ 326 (639)
. ......-.....++++|. +.++.+--+ .|...+++...........-....++++++.++++.++-...+.
T Consensus 119 ~----~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 119 K----VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp E----EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred E----EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 1 111122245778999986 445454422 56666665433333333334567899999855666666556677
Q ss_pred EEEEECCC
Q psy18073 327 IILYDTRA 334 (639)
Q Consensus 327 i~iwd~~~ 334 (639)
|...|+..
T Consensus 195 I~~~~~dG 202 (619)
T 3s94_A 195 IHKSNLDG 202 (619)
T ss_dssp EEEESSSC
T ss_pred EEEecCCC
Confidence 88887754
No 310
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.13 E-value=0.083 Score=50.82 Aligned_cols=141 Identities=17% Similarity=0.277 Sum_probs=84.3
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCC----CCE--EEEEe--c--CCeEEEEeCCCCC-CCcccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD----GSQ--FLSVG--I--DNTIKTWSSELSE-SDHIVP 255 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~----~~~--l~s~s--~--Dg~i~iwd~~~~~-~~~~~~ 255 (639)
.+++.....+-+.|+|+ +|+.++.+.. +.++.|..-|+ |+. ++.++ . +++|.++++.... ......
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 56666677789999999 8999988864 56777777662 322 33333 3 5799999774211 111110
Q ss_pred eE--EEecC-CeeEEeee--cCC-CC-EEEEcC-C-eeEEEeC---C----CCceeeeeecCCccEEEEEEcCCCCcEEE
Q psy18073 256 LH--TIISK-SVISSISH--QRK-SK-IFATCG-D-QCQLWEH---E----RNEPIRAFSWNVDSLHHVQFNPIDKHILA 319 (639)
Q Consensus 256 ~~--~~~~~-~~v~~~~~--~~~-~~-~l~~~~-~-~i~vwd~---~----~~~~~~~~~~h~~~v~~v~~sp~~~~~l~ 319 (639)
.. ..... ..+..++. +|. +. ++.+.+ + .+..|++ . +.+.++++... +.+..+...+ ....|.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd-~~g~Ly 195 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADD-EYGRLY 195 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEET-TTTEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcC-CCCeEE
Confidence 00 00111 45556666 664 44 233333 3 7777777 2 23566777654 5778888988 666788
Q ss_pred EEeCCCcEEEEEC
Q psy18073 320 SCASDRSIILYDT 332 (639)
Q Consensus 320 s~s~Dg~i~iwd~ 332 (639)
.+-+|.-|..+|.
T Consensus 196 v~eEd~GIw~~da 208 (355)
T 3amr_A 196 IAEEDEAIWKFSA 208 (355)
T ss_dssp EEETTTEEEEEEC
T ss_pred EecccceEEEEeC
Confidence 8888865544453
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.08 E-value=0.2 Score=47.26 Aligned_cols=220 Identities=14% Similarity=0.203 Sum_probs=130.4
Q ss_pred EEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCC-cccceE
Q psy18073 179 LAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESD-HIVPLH 257 (639)
Q Consensus 179 l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~~~~ 257 (639)
.-.+|.. +.+|--+ ..++.|+|+++.+.+..+.- ...|.--.|-.+ +.|+-.. +..|.-|++...... ..+..+
T Consensus 72 AIMnP~~-~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 72 AIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EEECSSS-SEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeeCCCc-cEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 3458887 6666655 57899999999998888774 457777788643 3555444 568999999752221 111111
Q ss_pred EEecCCeeEEeeecCCCCEEEEcC---------CeeEEEeCCCCceeeeeecCCccEEEEEEcCC--CCcEEEEEeCC--
Q psy18073 258 TIISKSVISSISHQRKSKIFATCG---------DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPI--DKHILASCASD-- 324 (639)
Q Consensus 258 ~~~~~~~v~~~~~~~~~~~l~~~~---------~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~--~~~~l~s~s~D-- 324 (639)
.......|-.-..+++.++++..+ |.+.+|..+.+ .-+.++||......+.+... ...+++-+...
T Consensus 147 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 225 (365)
T 2xzh_A 147 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 225 (365)
T ss_dssp GGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred hhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 111235777778889999877655 27889998754 45778888766554443321 12344444332
Q ss_pred -CcEEEEECCCccccCCccccccccccccccccCCCCCCCCCCCCchhhhhhccccccceeeeeeeecCccceeeecccc
Q psy18073 325 -RSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATK 403 (639)
Q Consensus 325 -g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (639)
+.++|-++.....-. .|+.. .
T Consensus 226 g~kLhIiEi~~~~~~~------------------------~~f~k----------------------------------k 247 (365)
T 2xzh_A 226 GGKLHIIEVGTPPTGN------------------------QPFPK----------------------------------K 247 (365)
T ss_dssp EEEEEEEECSSCCTTC------------------------CCCCC----------------------------------E
T ss_pred CcEEEEEEcCCCCCCC------------------------CCccc----------------------------------c
Confidence 467777764320000 00000 0
Q ss_pred ccccccccccccccCcccceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeeeecccccc
Q psy18073 404 LERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRD 468 (639)
Q Consensus 404 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~h~~~v~~ 468 (639)
..+.+ ..-.+-.+-.-++..|+.. .++.--..-|.|.++|+.+|.++..-+-....|..
T Consensus 248 ~vdi~-----fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 248 AVDVF-----FPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp EEEEC-----CCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred cceee-----CCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 00000 0001223334567777776 67888888899999999999998876544444443
No 312
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.96 E-value=0.37 Score=51.20 Aligned_cols=159 Identities=8% Similarity=-0.086 Sum_probs=97.8
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEec--CCeEEEEeCCCCCCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI--DNTIKTWSSELSESD 251 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~--Dg~i~iwd~~~~~~~ 251 (639)
.....+++.+.+.++.++-...+.|.+.++........+...-.....|++.|.+..|..+.. .+.|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 468899999965367777777899999998754433333344455789999997555554443 456766676632221
Q ss_pred cccceEEEecCCeeEEeeecCCCCEEEEcCC---eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 252 HIVPLHTIISKSVISSISHQRKSKIFATCGD---QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
......-.....+++++++..|..+.. .|...|++.........+......++++.. + .+.++-...+.|.
T Consensus 164 ----~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~-~-~ly~td~~~~~V~ 237 (619)
T 3s94_A 164 ----IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-D-ILYWTDWSTHSIL 237 (619)
T ss_dssp ----EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESS-S-EEEEECTTTCSEE
T ss_pred ----EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeC-C-EEEEecCCCCEEE
Confidence 000012245788999987665555442 788888875543333332223335677765 3 6666666778899
Q ss_pred EEECCCcccc
Q psy18073 329 LYDTRATVLS 338 (639)
Q Consensus 329 iwd~~~~~~~ 338 (639)
..|..+++..
T Consensus 238 ~~d~~tg~~~ 247 (619)
T 3s94_A 238 ACNKYTGEGL 247 (619)
T ss_dssp EEESSSCCCC
T ss_pred EEECCCCccc
Confidence 9998887654
No 313
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.90 E-value=0.017 Score=58.54 Aligned_cols=111 Identities=11% Similarity=0.117 Sum_probs=69.5
Q ss_pred ceEEEEEcC-CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCCC-EEEEcCC------eeEEEeC
Q psy18073 218 HVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKSK-IFATCGD------QCQLWEH 289 (639)
Q Consensus 218 ~V~~v~~sp-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~------~i~vwd~ 289 (639)
....|+++| ++..|..+...+.|+.+|+..+... ...........+++++++. ++++... .+.+++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-----~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-----TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-----EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-----EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 457899998 4556666665588999998864321 1112345688999999998 4444431 2333443
Q ss_pred CCCcee--eeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCc
Q psy18073 290 ERNEPI--RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT 335 (639)
Q Consensus 290 ~~~~~~--~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~ 335 (639)
.+... ..+.. .....+++++|+++.++++-..++.|..+|..++
T Consensus 213 -~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 213 -ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp -GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred -CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 33322 22322 2345678899966777777667788999987643
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.89 E-value=0.32 Score=47.89 Aligned_cols=151 Identities=14% Similarity=0.203 Sum_probs=95.4
Q ss_pred EEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCC-cccce
Q psy18073 178 CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESD-HIVPL 256 (639)
Q Consensus 178 ~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~-~~~~~ 256 (639)
+.-.+|.. +.+|-=+ ..++.|+|+++...+..+.-. ..|.--.|-.+ +.|+-.. +..|.-|++...... ..+..
T Consensus 70 sAIMnP~~-~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 70 SAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEEECSSS-SCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred eeeeCCCC-cEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheec
Confidence 44567877 6666655 579999999999988887754 45666777533 3455444 568999999752221 11111
Q ss_pred EEEecCCeeEEeeecCCCCEEEEcC---------CeeEEEeCCCCceeeeeecCCccEEEEEEcCC--CCcEEEEEeCC-
Q psy18073 257 HTIISKSVISSISHQRKSKIFATCG---------DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPI--DKHILASCASD- 324 (639)
Q Consensus 257 ~~~~~~~~v~~~~~~~~~~~l~~~~---------~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~--~~~~l~s~s~D- 324 (639)
+.......|-.-..+++.++++..+ |.+.+|..+.+ .-+.++||......+.+..+ ...+++-+...
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 1111235777778889999887654 27889998754 45778888776655555421 12344444443
Q ss_pred --CcEEEEECCC
Q psy18073 325 --RSIILYDTRA 334 (639)
Q Consensus 325 --g~i~iwd~~~ 334 (639)
+.++|-++..
T Consensus 224 ~g~kLhi~Ei~~ 235 (494)
T 1bpo_A 224 AGGKLHIIEVGT 235 (494)
T ss_dssp TCCEEEEEECSC
T ss_pred CCcEEEEEEcCC
Confidence 6777777743
No 315
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.89 E-value=0.096 Score=50.48 Aligned_cols=159 Identities=8% Similarity=-0.073 Sum_probs=102.0
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe--cCCeEEEEeCCCCCCCc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG--IDNTIKTWSSELSESDH 252 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s--~Dg~i~iwd~~~~~~~~ 252 (639)
....+++.+.+..+.++-...+.|.+.++........+.........+++.|.+..|+.+. ..+.|...++......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~- 158 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF- 158 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE-
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE-
Confidence 4567888875436777777788999999865443333334445678999998766665554 3578888887642211
Q ss_pred ccceEEEecCCeeEEeeecCCCCEEEEcC---CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEE
Q psy18073 253 IVPLHTIISKSVISSISHQRKSKIFATCG---DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~i 329 (639)
......-...+.+++++++..+..++ +.|..+|++.........+......++++.. +.++++-...+.|..
T Consensus 159 ---~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 159 ---IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILA 233 (318)
T ss_dssp ---EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEE
T ss_pred ---EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEE
Confidence 00001223568899998666555444 2899999875443333333445567788753 567777777888999
Q ss_pred EECCCccccC
Q psy18073 330 YDTRATVLSR 339 (639)
Q Consensus 330 wd~~~~~~~~ 339 (639)
+|..+++...
T Consensus 234 ~~~~~G~~~~ 243 (318)
T 3sov_A 234 CNKYTGEGLR 243 (318)
T ss_dssp EETTTCCSCE
T ss_pred EECCCCCceE
Confidence 9987776543
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.87 E-value=0.14 Score=50.29 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=62.3
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCc-eEEEEe---ccCCceEEEEEcCC---CCEEE-EEec---C----C
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-CVQTYQ---AHDGHVRDVCFLPD---GSQFL-SVGI---D----N 238 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~-~~~~~~---~h~~~V~~v~~sp~---~~~l~-s~s~---D----g 238 (639)
.....++|.|+| .++++ ..+|.|+++| .+++ .+..+. ........|+|+|+ +..|. +-+. + .
T Consensus 29 ~~P~~ia~~pdG-~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGG-RYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETT-EEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCC-eEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 457899999999 65555 5569999998 4554 222211 12345889999997 44444 4332 3 5
Q ss_pred eEEEEeCCCCCCC-c-ccce-EEEec--CCeeEEeeecCCCCEEEEcC
Q psy18073 239 TIKTWSSELSESD-H-IVPL-HTIIS--KSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 239 ~i~iwd~~~~~~~-~-~~~~-~~~~~--~~~v~~~~~~~~~~~l~~~~ 281 (639)
.|..|+....... . ...+ ..... ......++|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6777776643111 0 0001 11111 12356799999999888754
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.87 E-value=0.057 Score=52.58 Aligned_cols=155 Identities=17% Similarity=0.199 Sum_probs=90.3
Q ss_pred cEEEEEECCCCCeeEEEe------------eCCCcEEEEeCCC--CceE-EEEec-----cCCceEEEEEcC--CCC-EE
Q psy18073 175 GISCLAKHPTKLSTIISG------------AYDGEVKVWNLTS--QSCV-QTYQA-----HDGHVRDVCFLP--DGS-QF 231 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sg------------s~dg~i~vWd~~~--~~~~-~~~~~-----h~~~V~~v~~sp--~~~-~l 231 (639)
..-.++..|+| ..++++ ..+|.|.++|..+ ++.. ..+.+ ..-....+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 34456678887 554444 1689999999873 2321 12222 223567777755 454 44
Q ss_pred EEE-ec--CCeEEEEeCCCCCCCcccceEEEecC--CeeEEeeecCCCCEEEEcC-----------------CeeEEEeC
Q psy18073 232 LSV-GI--DNTIKTWSSELSESDHIVPLHTIISK--SVISSISHQRKSKIFATCG-----------------DQCQLWEH 289 (639)
Q Consensus 232 ~s~-s~--Dg~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~-----------------~~i~vwd~ 289 (639)
+.+ .. +.+|.+|++...... ........+. ...+.+.+.++|.++++.. ..-.+|.+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~-~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKS-LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTE-EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCE-EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 444 22 578889888754332 1112222222 3678999999999877754 12344444
Q ss_pred CCCceeeeeecCCccEEEEEEcCCCCcE-EEEEeCCCcEEEEECC
Q psy18073 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHI-LASCASDRSIILYDTR 333 (639)
Q Consensus 290 ~~~~~~~~~~~h~~~v~~v~~sp~~~~~-l~s~s~Dg~i~iwd~~ 333 (639)
..++. ..+...-..-++++|+| |++. .++-+..+.|..||+.
T Consensus 209 d~~~~-~~~~~~l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 209 SPNDV-RVVAEGFDFANGINISP-DGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp CTTCC-EEEEEEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEEC
T ss_pred ECCeE-EEeecCCcccCcceECC-CCCEEEEEeCCCCeEEEEEEC
Confidence 44432 33333345668999999 6654 4555567889999975
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.84 E-value=0.024 Score=50.28 Aligned_cols=147 Identities=11% Similarity=0.092 Sum_probs=86.6
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCce------EEEEe--ccCCceEEEEEcCCCCEEEEEecCCeEEEEeCC
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSC------VQTYQ--AHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~------~~~~~--~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~ 246 (639)
.+..++|+|+| .+.+. .+|.+.--+..+... -..+- +-.. -.++.|.|+|.+.++ .||.|.-++..
T Consensus 42 ~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 56699999998 65555 677776666544211 11111 1112 578999999988887 57999888865
Q ss_pred CCCCCcccceEEEecC---CeeEEeeecCCCCEEEEcCCeeEEEeCCCCce-----eeeee--cCCccEEEEEEcCCCCc
Q psy18073 247 LSESDHIVPLHTIISK---SVISSISHQRKSKIFATCGDQCQLWEHERNEP-----IRAFS--WNVDSLHHVQFNPIDKH 316 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~-----~~~~~--~h~~~v~~v~~sp~~~~ 316 (639)
+......+-....... ..+..+.+.|+|.+.++.++.+.-....++.. ..+.- ..-..-.-+.|.| ++.
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~-~G~ 194 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHGQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS-VGT 194 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEETTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT-TSC
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEeCCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC-CCc
Confidence 4333322212222222 47799999999999999955643333322210 11111 2223444577888 777
Q ss_pred EEEEEeCCCcEEEEEC
Q psy18073 317 ILASCASDRSIILYDT 332 (639)
Q Consensus 317 ~l~s~s~Dg~i~iwd~ 332 (639)
+.+.. +| ++|-.
T Consensus 195 l~~v~--~g--~~Y~~ 206 (236)
T 1tl2_A 195 LFGVQ--GG--KFYED 206 (236)
T ss_dssp EEEEE--TT--EEEEE
T ss_pred EEEEe--CC--eEEec
Confidence 66654 77 45543
No 319
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.80 E-value=0.018 Score=62.19 Aligned_cols=93 Identities=11% Similarity=0.062 Sum_probs=56.5
Q ss_pred hhhhhhhcccccc--ccc-cccccEEEEEECCCCCeeEEEeeC-CCcEEEEeCCCCceEEEEeccCC-ceEEEEEcCCCC
Q psy18073 155 TKLERVFAKPFVA--NLD-GHKDGISCLAKHPTKLSTIISGAY-DGEVKVWNLTSQSCVQTYQAHDG-HVRDVCFLPDGS 229 (639)
Q Consensus 155 ~~~~~~~~~~~~~--~l~-~H~~~V~~l~~sp~~~~~l~sgs~-dg~i~vWd~~~~~~~~~~~~h~~-~V~~v~~sp~~~ 229 (639)
+.+||..+++... .+. .+.....++++.++| .+++.|+. ++.+.+||..+.+-...-..+.. .-.+++..++++
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~ 299 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 299 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe
Confidence 4456655544322 121 123334457888888 88898884 56899999877643221111111 123456667999
Q ss_pred EEEEEe-cC-----CeEEEEeCCCC
Q psy18073 230 QFLSVG-ID-----NTIKTWSSELS 248 (639)
Q Consensus 230 ~l~s~s-~D-----g~i~iwd~~~~ 248 (639)
.++.|+ .+ ..+.+||..+.
T Consensus 300 iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 300 VFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEEEeCcccCCcccccceEeCCCCC
Confidence 999998 44 56899998764
No 320
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.78 E-value=0.027 Score=59.47 Aligned_cols=144 Identities=10% Similarity=0.054 Sum_probs=89.2
Q ss_pred CcEEEEeCCCCceEEEEec--cC--------CceEEEEEc-CCCC---EEEEEecCCeEEEEeCCCCCCCcccceEE---
Q psy18073 196 GEVKVWNLTSQSCVQTYQA--HD--------GHVRDVCFL-PDGS---QFLSVGIDNTIKTWSSELSESDHIVPLHT--- 258 (639)
Q Consensus 196 g~i~vWd~~~~~~~~~~~~--h~--------~~V~~v~~s-p~~~---~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~--- 258 (639)
+.|..+|..+|+.+..++. |. .++. +... .+|+ .++.++.+|.+.++|..+++.....+...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999888753 32 1222 2222 4674 78889999999999999877653322110
Q ss_pred ----Ee-----------------------cCCe-----------eEEeeecCCCCEEEEc--------------------
Q psy18073 259 ----II-----------------------SKSV-----------ISSISHQRKSKIFATC-------------------- 280 (639)
Q Consensus 259 ----~~-----------------------~~~~-----------v~~~~~~~~~~~l~~~-------------------- 280 (639)
.. .... -..++++|+..++.+.
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 0000 0134556554333221
Q ss_pred ---------------CCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCccccCCcc
Q psy18073 281 ---------------GDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPD 342 (639)
Q Consensus 281 ---------------~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 342 (639)
.+.+..||+.+++.+.....+.. +..-.... .+.+++.|+.||.++.||.++|+.+-++.
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP-LWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC-CCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC-CcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 13688899999998877664322 11111111 34577779999999999999998875543
No 321
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.69 E-value=0.052 Score=52.71 Aligned_cols=155 Identities=10% Similarity=0.086 Sum_probs=92.0
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCCcEEEEeC--CCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCC
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL--TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~--~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~ 248 (639)
++...+..+++.|++ .+++.+...+..+-+|- .+.+.+. ......+..+.+.++++.+ .++.+|.+.+++...+
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSG-EYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNS 235 (327)
T ss_dssp SCCCCEEEEEECTTS-CEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEE
T ss_pred CCCcceEEEEEcCCC-cEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCC
Confidence 445678999999988 77776654444444552 2333332 2355678999999988765 4556788887742211
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-eeEEEeCCCCceeeeee---cCCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-QCQLWEHERNEPIRAFS---WNVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~~~~~~~---~h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
..-.......+.....+..+++.+++.+++++.+ .+ ++..+.|+.-..+. .....++++.|.+ ++. ++.++.+
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~-~~~-~~~~G~~ 312 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS-PDQ-GFILGQK 312 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE-TTE-EEEECST
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC-CCc-eEEEcCC
Confidence 1100000000011235778888888888888775 44 55555554333333 2245678888875 444 5666789
Q ss_pred CcEEEEEC
Q psy18073 325 RSIILYDT 332 (639)
Q Consensus 325 g~i~iwd~ 332 (639)
|.|.-++-
T Consensus 313 G~i~~~~~ 320 (327)
T 2xbg_A 313 GILLRYVT 320 (327)
T ss_dssp TEEEEECC
T ss_pred ceEEEEcC
Confidence 98776653
No 322
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.62 E-value=0.0082 Score=65.04 Aligned_cols=133 Identities=9% Similarity=-0.008 Sum_probs=73.4
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEE-ecCCeEEEEeCCCC----CCCcccceEEEecCCeeEEee
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV-GIDNTIKTWSSELS----ESDHIVPLHTIISKSVISSIS 269 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~-s~Dg~i~iwd~~~~----~~~~~~~~~~~~~~~~v~~~~ 269 (639)
.+.|++.++.+......+.. ...+..|+|++.+..|+.+ ...+.|+.+++... .....+. ........++
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~----~~~~~P~gla 459 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLA 459 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC----SCC--CCCEE
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe----CCCCCcceEE
Confidence 35788888877665444333 3456789999866666554 45688999998751 1111110 0112345677
Q ss_pred ecCC-CCEEEEcC--CeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCC-CcEEEEEC
Q psy18073 270 HQRK-SKIFATCG--DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASD-RSIILYDT 332 (639)
Q Consensus 270 ~~~~-~~~l~~~~--~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~D-g~i~iwd~ 332 (639)
+.+. +.++++-. +.|.++++........+........+++++|.++.++++-... +.|...++
T Consensus 460 vD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 460 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp CCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred EEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 7754 44444432 3899999875544333333334557788888445544443222 45555444
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.57 E-value=0.55 Score=45.42 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=65.7
Q ss_pred ccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceE--EEE----eccCCceEEEEEcCC---CCEE-EEE--ecCCe
Q psy18073 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV--QTY----QAHDGHVRDVCFLPD---GSQF-LSV--GIDNT 239 (639)
Q Consensus 172 H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~--~~~----~~h~~~V~~v~~sp~---~~~l-~s~--s~Dg~ 239 (639)
.-.....|+|.|+| .++++--..|.|++++..+++.. ..+ ....+....|+|+|+ +..| ++- ..++.
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 34467899999999 77777665899999987666532 212 123456889999995 3444 332 24455
Q ss_pred EEEEeCCCCC----CC-cccce-EEEe--cCCeeEEeeecCCCCEEEEcC
Q psy18073 240 IKTWSSELSE----SD-HIVPL-HTII--SKSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 240 i~iwd~~~~~----~~-~~~~~-~~~~--~~~~v~~~~~~~~~~~l~~~~ 281 (639)
|.-|.+.... .. ....+ .... .......+.|.|||.++++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 6666665421 11 01111 1111 122456799999999888754
No 324
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.48 E-value=0.18 Score=51.03 Aligned_cols=156 Identities=6% Similarity=0.033 Sum_probs=95.2
Q ss_pred cEEEEEECC-CCCeeEEEeeCCCcEEEEeCCCCceEEEE-e-ccCCceEEEEEcCCCCEE-EEEecCCeEEEEeCCC--C
Q psy18073 175 GISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTY-Q-AHDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSEL--S 248 (639)
Q Consensus 175 ~V~~l~~sp-~~~~~l~sgs~dg~i~vWd~~~~~~~~~~-~-~h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~~--~ 248 (639)
....++++| +| .+.++-..++.|+.+|..++.....+ . +....-..++|+|++++| ++-...+.|+.++... +
T Consensus 229 ~P~giavd~~~G-~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 229 GAKTCAVHPQNG-KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp SBCCCEECTTTC-CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCEEEEeCCCC-eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 346788999 66 66666667889999998877663333 2 122234579999999855 4555678999988653 2
Q ss_pred CCCcccceEEE-e------------cCCeeEEeee---------cCCCCEEEEcCC--eeEEEeCCCCceeeeeecC---
Q psy18073 249 ESDHIVPLHTI-I------------SKSVISSISH---------QRKSKIFATCGD--QCQLWEHERNEPIRAFSWN--- 301 (639)
Q Consensus 249 ~~~~~~~~~~~-~------------~~~~v~~~~~---------~~~~~~l~~~~~--~i~vwd~~~~~~~~~~~~h--- 301 (639)
.......+... . .-.....+++ .+++.++++-.+ .|+.++. +|. +.++.+.
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t~~G~g~~ 385 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTTYAGRGNS 385 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEEEECCCTT
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEEEEeCCCC
Confidence 11100001000 0 0123566888 677777766554 7888885 453 3333221
Q ss_pred ---------------CccEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q psy18073 302 ---------------VDSLHHVQFNPIDKHILASCASDRSIILYDTR 333 (639)
Q Consensus 302 ---------------~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~ 333 (639)
-....+|+++|.++.++++-...+.|+.++++
T Consensus 386 ~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 386 REWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 12367899995377777776677788887753
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.47 E-value=0.82 Score=48.56 Aligned_cols=156 Identities=8% Similarity=-0.050 Sum_probs=96.4
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec------cCCceEEEEEcCCCCEE-EEEecCCeEEEEeCC
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA------HDGHVRDVCFLPDGSQF-LSVGIDNTIKTWSSE 246 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~------h~~~V~~v~~sp~~~~l-~s~s~Dg~i~iwd~~ 246 (639)
..+.+++|.+.+..++.+=...+.|+.++.........+.. ....+..+++...++.| .+-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 45788999987635556655678899998765443333322 23468899999876655 466677899999886
Q ss_pred CCCCCcccceEEEecCCeeEEeeecC-CCCEEEEcCC----eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEE
Q psy18073 247 LSESDHIVPLHTIISKSVISSISHQR-KSKIFATCGD----QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~----~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~ 321 (639)
. .... ......-.....++++| .|.++.+-.+ .|...+++...........-....++++++.++++.++-
T Consensus 420 G-~~~~---~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D 495 (628)
T 4a0p_A 420 G-RSVG---VVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWAD 495 (628)
T ss_dssp S-CEEE---EEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred C-CeEE---EEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEe
Confidence 3 2110 11112234688999999 5666655433 355556653333223333345678999998445555554
Q ss_pred eCCCcEEEEECC
Q psy18073 322 ASDRSIILYDTR 333 (639)
Q Consensus 322 s~Dg~i~iwd~~ 333 (639)
+..+.|...|+.
T Consensus 496 ~~~~~I~~~~~d 507 (628)
T 4a0p_A 496 SDLRRIESSDLS 507 (628)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 556778888874
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.36 E-value=0.52 Score=46.08 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=58.9
Q ss_pred ccEEEEEECCCCCe-eEEEeeCCCcEEEEeCCCCceEEEE-------eccCCceEEEEEcCC---CCEE-EEEec-----
Q psy18073 174 DGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSCVQTY-------QAHDGHVRDVCFLPD---GSQF-LSVGI----- 236 (639)
Q Consensus 174 ~~V~~l~~sp~~~~-~l~sgs~dg~i~vWd~~~~~~~~~~-------~~h~~~V~~v~~sp~---~~~l-~s~s~----- 236 (639)
.....|+|.|+| + +++ +...|.|++++.. +.....+ ....+....|+|+|+ +..| ++-+.
T Consensus 18 ~~P~~i~~~pdG-~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDN-HGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTT-CCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCC-CEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 356899999999 7 554 4567999999853 3321111 112345789999995 4444 44332
Q ss_pred --CCeEEEEeCCCCCCCcccceEEE----e----cCCeeEEeeecCCCCEEEEcC
Q psy18073 237 --DNTIKTWSSELSESDHIVPLHTI----I----SKSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 237 --Dg~i~iwd~~~~~~~~~~~~~~~----~----~~~~v~~~~~~~~~~~l~~~~ 281 (639)
...|..|++........ ....+ . .......++|.|||.++++.+
T Consensus 95 ~~~~~v~r~~~~~~~~~~~-~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVT-DFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp CEEEEEEEEEECTTSSBEE-EEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred CceeEEEEEEECCCCCCCC-ceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 23566666653221100 01111 0 112346799999998777753
No 327
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.34 E-value=0.068 Score=50.94 Aligned_cols=119 Identities=9% Similarity=0.109 Sum_probs=75.7
Q ss_pred eccCCceEEEEEcCCCCEEEEEe-cCCeEEEEeCCCCCCCcccceEE----EecCCeeEEeee---cCCCCEEEEcC---
Q psy18073 213 QAHDGHVRDVCFLPDGSQFLSVG-IDNTIKTWSSELSESDHIVPLHT----IISKSVISSISH---QRKSKIFATCG--- 281 (639)
Q Consensus 213 ~~h~~~V~~v~~sp~~~~l~s~s-~Dg~i~iwd~~~~~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~l~~~~--- 281 (639)
.+..-.-.+++|.+....|..++ ..++|..||...+..... .... ......+..+.+ .|++.++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 33444456788987555555554 799999999875432111 1100 001124678899 68888887533
Q ss_pred ------------CeeEEEeCC---CCceeeeee--cC-----------CccEEEEEEcCCCCcEEEEEeCC-CcEEEEEC
Q psy18073 282 ------------DQCQLWEHE---RNEPIRAFS--WN-----------VDSLHHVQFNPIDKHILASCASD-RSIILYDT 332 (639)
Q Consensus 282 ------------~~i~vwd~~---~~~~~~~~~--~h-----------~~~v~~v~~sp~~~~~l~s~s~D-g~i~iwd~ 332 (639)
..+..+|+. +++.+.... .. ......++..+ +|+..++++.- +.|...|.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeC
Confidence 268899999 787765543 11 13578999999 78888888877 77665554
Q ss_pred C
Q psy18073 333 R 333 (639)
Q Consensus 333 ~ 333 (639)
.
T Consensus 167 d 167 (334)
T 2p9w_A 167 D 167 (334)
T ss_dssp T
T ss_pred C
Confidence 3
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.27 E-value=0.13 Score=50.70 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=66.9
Q ss_pred CCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecC-----CeeEEeeecCCCCEEEEcCC-eeEEEeCCCCc-------
Q psy18073 227 DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISK-----SVISSISHQRKSKIFATCGD-QCQLWEHERNE------- 293 (639)
Q Consensus 227 ~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~-~i~vwd~~~~~------- 293 (639)
+|..++.+- ++.||.-++..... .+.+..+ ..+..+..+|+|.++|..+. .|.|-.+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~-----Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSL-----YHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSS-----CEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCc-----ceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccc
Confidence 444444443 35666666653221 2222222 24677999999999999987 88888876332
Q ss_pred -----eeeeeec------CCccEEEEEEcCCC--CcEEEEEeCCCcEEEEECCC
Q psy18073 294 -----PIRAFSW------NVDSLHHVQFNPID--KHILASCASDRSIILYDTRA 334 (639)
Q Consensus 294 -----~~~~~~~------h~~~v~~v~~sp~~--~~~l~s~s~Dg~i~iwd~~~ 334 (639)
..+.+.- ...+|..+.|+|-+ +..|++-..|++|++||+..
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1122322 24679999999943 34788889999999999976
No 329
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.85 E-value=0.26 Score=47.33 Aligned_cols=175 Identities=8% Similarity=0.117 Sum_probs=107.3
Q ss_pred hhhhhhhccccccccccccccEEEEEECCC----CCe--e-EEEeeC--CCcEEEEeC--CCCceEEEEec------cC-
Q psy18073 155 TKLERVFAKPFVANLDGHKDGISCLAKHPT----KLS--T-IISGAY--DGEVKVWNL--TSQSCVQTYQA------HD- 216 (639)
Q Consensus 155 ~~~~~~~~~~~~~~l~~H~~~V~~l~~sp~----~~~--~-l~sgs~--dg~i~vWd~--~~~~~~~~~~~------h~- 216 (639)
+.+.|+ .++.++.+.+ +.++.+..-|. |.. + ++|--. +++|.+|++ .++. +..+.. ..
T Consensus 52 L~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 52 LVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAI 127 (355)
T ss_dssp EEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCC
T ss_pred EEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCC
Confidence 455666 6777777764 56777776663 201 2 233333 579999976 3443 444421 11
Q ss_pred CceEEEEE--cCC-CC-EEEEEecCCeEEEEeCCCCC--CCcccceEEEecCCeeEEeeecCCCCEEEEcCC--eeEEEe
Q psy18073 217 GHVRDVCF--LPD-GS-QFLSVGIDNTIKTWSSELSE--SDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QCQLWE 288 (639)
Q Consensus 217 ~~V~~v~~--sp~-~~-~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i~vwd 288 (639)
..+..+++ +|. ++ +++....+|.+..|++.... ......+..+...+.+..+...+....|..+.. .|..+|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~d 207 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFS 207 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEe
Confidence 45677888 774 44 67788889999999985321 122333566667788999999988777777775 444445
Q ss_pred CC-----CCceeeeee-cCC-ccEEEEEEcCC-CCc--EEEEEeCCCcEEEEECC
Q psy18073 289 HE-----RNEPIRAFS-WNV-DSLHHVQFNPI-DKH--ILASCASDRSIILYDTR 333 (639)
Q Consensus 289 ~~-----~~~~~~~~~-~h~-~~v~~v~~sp~-~~~--~l~s~s~Dg~i~iwd~~ 333 (639)
.+ +++.+..+. ++- ..+..|++.+. +++ +++|+-.+.+..+||..
T Consensus 208 a~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 208 AEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 33 234444442 222 36888888431 333 45554467899999986
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.62 E-value=1.6 Score=42.55 Aligned_cols=108 Identities=15% Similarity=0.164 Sum_probs=60.7
Q ss_pred cccEEEEEECCC---CCeeEEEeeCC-----CcEEEEeCCCCc-----eE-EEEe---ccCCceEEEEEcCCCCEEEEEe
Q psy18073 173 KDGISCLAKHPT---KLSTIISGAYD-----GEVKVWNLTSQS-----CV-QTYQ---AHDGHVRDVCFLPDGSQFLSVG 235 (639)
Q Consensus 173 ~~~V~~l~~sp~---~~~~l~sgs~d-----g~i~vWd~~~~~-----~~-~~~~---~h~~~V~~v~~sp~~~~l~s~s 235 (639)
......|+|+|+ +..+.++-+.+ +.|..|+...+. .+ ..+. +.......++|.|||.+.++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 456899999998 42555554433 678888876442 11 1133 1111236899999998777654
Q ss_pred cC-------------CeEEEEeCCCCCCC----------cccceEEEecCCeeEEeeecC-CCCEEEEcCC
Q psy18073 236 ID-------------NTIKTWSSELSESD----------HIVPLHTIISKSVISSISHQR-KSKIFATCGD 282 (639)
Q Consensus 236 ~D-------------g~i~iwd~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 282 (639)
.. |.|.-+|... ... ....+.. ........++++| ++.++++-.+
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf~~~~~~~~~i~a-~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEG-EPAPGNPFLGRRGARPEVYS-LGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTTTTCTTSCTTEEE-ECCSEECCCEECTTTCCEEEEEEC
T ss_pred CCCCCccccCCCCCceEEEEEcCCC-CCCCCCcccCCCCCCccEEE-EcCCCcccEEEECCCCCEEEEEcC
Confidence 21 4566666542 100 0011111 1223567889999 6776666543
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.35 E-value=1.3 Score=39.31 Aligned_cols=135 Identities=10% Similarity=0.078 Sum_probs=80.8
Q ss_pred eeEEEeeCCCcEEEEeCCCCc------eEEEEecc--CCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEE
Q psy18073 187 STIISGAYDGEVKVWNLTSQS------CVQTYQAH--DGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHT 258 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~------~~~~~~~h--~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~ 258 (639)
.+|.....| +|++=...++. ....+ ++ =..++.++|+|+|.+.+. .+|.+.--+..+...........
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 677777777 66665554443 12222 23 246889999999986666 67877666665433322111112
Q ss_pred Eec---CCeeEEeeecCCCCEEEEcCCeeEEEeCCCCcee------eee-ecCCccEEEEEEcCCCCcEEEEEeCCCcEE
Q psy18073 259 IIS---KSVISSISHQRKSKIFATCGDQCQLWEHERNEPI------RAF-SWNVDSLHHVQFNPIDKHILASCASDRSII 328 (639)
Q Consensus 259 ~~~---~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~------~~~-~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~ 328 (639)
... -....++.+.|+|.+.++.++.|.-++..+...- ..+ .+.=..+..|.|.| ++.+.+.. |+.+.
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFY 157 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEE
T ss_pred EecccccccceEEEECCCCCEEEeCCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEE
Confidence 111 1234789999999999996667777765332111 011 11124679999999 78776665 77743
No 332
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.05 E-value=1.4 Score=42.66 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=24.0
Q ss_pred cceeEEeeCCCCcceEEeccCCceEEEecCCc
Q psy18073 421 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTS 452 (639)
Q Consensus 421 ~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~ 452 (639)
...+.++|+||+..+.++-+..+.|..|++..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 34689999999944455556678999999863
No 333
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.96 E-value=1.3 Score=45.02 Aligned_cols=161 Identities=6% Similarity=0.032 Sum_probs=93.5
Q ss_pred EEEEEECCCCCeeEEEeeCCCcEEEEeCC-------CCce-----------EEE-Ee-ccCCceEEEEEcCCCCE-EEEE
Q psy18073 176 ISCLAKHPTKLSTIISGAYDGEVKVWNLT-------SQSC-----------VQT-YQ-AHDGHVRDVCFLPDGSQ-FLSV 234 (639)
Q Consensus 176 V~~l~~sp~~~~~l~sgs~dg~i~vWd~~-------~~~~-----------~~~-~~-~h~~~V~~v~~sp~~~~-l~s~ 234 (639)
...++++|++..++++-..++.|..+|+. ++.. ... +. +.......|+|+|+|+. .++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 35778899553677777788899999987 5543 112 21 22345689999999995 4455
Q ss_pred ecCCeEEEEeCCCCCCCc--ccceEEE-ecC------------CeeE-Eeeec-------CCCCEEEEcCC--eeEEEeC
Q psy18073 235 GIDNTIKTWSSELSESDH--IVPLHTI-ISK------------SVIS-SISHQ-------RKSKIFATCGD--QCQLWEH 289 (639)
Q Consensus 235 s~Dg~i~iwd~~~~~~~~--~~~~~~~-~~~------------~~v~-~~~~~-------~~~~~l~~~~~--~i~vwd~ 289 (639)
+..+.|+.++........ ...+... ... .... .+... +++.++++-.+ .|+.++
T Consensus 329 ~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~- 407 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT- 407 (496)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-
T ss_pred CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-
Confidence 567889886654211100 0001100 000 1123 34443 45555554443 888888
Q ss_pred CCCceeeeeecC------------------------CccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 290 ERNEPIRAFSWN------------------------VDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 290 ~~~~~~~~~~~h------------------------~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
.+|. +.++-+. -....+|+++++++.+.++=.....||.+++......
T Consensus 408 ~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 408 PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 4453 4444332 1236789999833777777667788999998765544
No 334
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.84 E-value=1 Score=42.65 Aligned_cols=142 Identities=13% Similarity=0.247 Sum_probs=72.3
Q ss_pred CCCeeEEEeeCC-----CcEEEEeCCCCc-----eEEEEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEeCCCC
Q psy18073 184 TKLSTIISGAYD-----GEVKVWNLTSQS-----CVQTYQAHDGHVRDVCFLPDGSQFLSVGID-----NTIKTWSSELS 248 (639)
Q Consensus 184 ~~~~~l~sgs~d-----g~i~vWd~~~~~-----~~~~~~~h~~~V~~v~~sp~~~~l~s~s~D-----g~i~iwd~~~~ 248 (639)
++ .+++.|+.+ ..+.+||..+.+ .+..+......-..+.+ +++.++.|+.+ ..+.++|+.+.
T Consensus 62 ~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HD-RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CC-EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 45 778888765 468999987755 22222211112222222 67777777754 36888888764
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEEE
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHILA 319 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l~ 319 (639)
.-.. .........-.++. .-++.+++.|+ +.+.+||+.+++-... +.........+.+ ++.+++
T Consensus 139 ~W~~---~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v 211 (301)
T 2vpj_A 139 QWSM---LGDMQTAREGAGLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL---NDHIYV 211 (301)
T ss_dssp EEEE---EEECSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEE
T ss_pred eEEE---CCCCCCCcccceEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE---CCEEEE
Confidence 3211 11111111111111 12566777665 2688899887753322 1111111122222 467777
Q ss_pred EEeCC-----CcEEEEECCCc
Q psy18073 320 SCASD-----RSIILYDTRAT 335 (639)
Q Consensus 320 s~s~D-----g~i~iwd~~~~ 335 (639)
.|+.+ ..+.+||+.+.
T Consensus 212 ~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 212 VGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp ECCBCSSSBCCCEEEEETTTT
T ss_pred EeCCCCCcccceEEEEeCCCC
Confidence 77764 34677776553
No 335
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.70 E-value=3.7 Score=40.50 Aligned_cols=143 Identities=17% Similarity=0.195 Sum_probs=87.4
Q ss_pred CCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc----CCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcc-----
Q psy18073 183 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH----DGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHI----- 253 (639)
Q Consensus 183 p~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h----~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~----- 253 (639)
.+| ..++.+- ++.||.-++.....-+.+... -+.|..+..+|+|++||..+ +.+|.|-.+..+.....
T Consensus 30 ~n~-t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNG-TRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTT-TEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCC-CEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 344 4444443 367887787754444444432 23578899999999999887 56899988874321111
Q ss_pred --cceEEEe-------cCCeeEEeeecCCCC----EEE-EcCCeeEEEeCCCCc--eeeeee---------cCCccEEEE
Q psy18073 254 --VPLHTII-------SKSVISSISHQRKSK----IFA-TCGDQCQLWEHERNE--PIRAFS---------WNVDSLHHV 308 (639)
Q Consensus 254 --~~~~~~~-------~~~~v~~~~~~~~~~----~l~-~~~~~i~vwd~~~~~--~~~~~~---------~h~~~v~~v 308 (639)
....... ....|..+.|||-+. +++ +.++.|++||+.... +. .+. .....|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 1112221 245799999999432 333 333499999998632 22 222 223578899
Q ss_pred EEcCCCCcEEEEEe--CCCcEEEE
Q psy18073 309 QFNPIDKHILASCA--SDRSIILY 330 (639)
Q Consensus 309 ~~sp~~~~~l~s~s--~Dg~i~iw 330 (639)
+|.+ ++-.|...+ ..|-|.-.
T Consensus 186 ~Fg~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECT-TSSCEEEEECTTSCEEEEE
T ss_pred EEcC-CCcEEEEEecCCCCCEEEE
Confidence 9998 666555544 66766543
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.59 E-value=4.1 Score=41.15 Aligned_cols=107 Identities=17% Similarity=0.158 Sum_probs=61.9
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceE--EEEec------cCCceEEEEEcCC---CCEEE-EEec-----
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV--QTYQA------HDGHVRDVCFLPD---GSQFL-SVGI----- 236 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~--~~~~~------h~~~V~~v~~sp~---~~~l~-s~s~----- 236 (639)
.....|+|.|+| .++++-...+.|++++..++... ..+.. ..+....|+|+|+ +..|. +-+.
T Consensus 27 ~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 356799999999 77776544457999886655432 22221 2456779999995 44444 4332
Q ss_pred -------CCeEEEEeCCCCCCC--cccceE-EEe--cCCeeEEeeecCCCCEEEEcC
Q psy18073 237 -------DNTIKTWSSELSESD--HIVPLH-TII--SKSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 237 -------Dg~i~iwd~~~~~~~--~~~~~~-~~~--~~~~v~~~~~~~~~~~l~~~~ 281 (639)
...|.-++....... ....+. ... .......++|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555555432111 000011 111 123578899999999888754
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.56 E-value=0.86 Score=52.07 Aligned_cols=149 Identities=14% Similarity=0.209 Sum_probs=88.7
Q ss_pred EECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCC-CCcccceEE
Q psy18073 180 AKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE-SDHIVPLHT 258 (639)
Q Consensus 180 ~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~-~~~~~~~~~ 258 (639)
-.+|.. +.+|-=+ ..++.|+|+++...+..+.- ..+|.--.|-.+ +.|+-.+ +..|.-|++.... ....+..+.
T Consensus 72 IMnP~~-~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 72 IMNPAS-KVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred ccCCCc-ceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 346766 5555544 57999999998887777664 446767777533 3444433 4579999997422 222222332
Q ss_pred EecCCeeEEeeecCCCCEEEEcC---------CeeEEEeCCCCceeeeeecCCccEEEEEEc--CCCCcEEEEEeC---C
Q psy18073 259 IISKSVISSISHQRKSKIFATCG---------DQCQLWEHERNEPIRAFSWNVDSLHHVQFN--PIDKHILASCAS---D 324 (639)
Q Consensus 259 ~~~~~~v~~~~~~~~~~~l~~~~---------~~i~vwd~~~~~~~~~~~~h~~~v~~v~~s--p~~~~~l~s~s~---D 324 (639)
......|-.-..+++.++++..| |.+.+|..+.+ ..+.+.||.+....+... +....+++.+.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 22346777777888888877554 37888888754 345667776655444432 111223333322 2
Q ss_pred CcEEEEECCC
Q psy18073 325 RSIILYDTRA 334 (639)
Q Consensus 325 g~i~iwd~~~ 334 (639)
+.++|-++..
T Consensus 226 ~kLhi~Ei~~ 235 (1630)
T 1xi4_A 226 GKLHIIEVGT 235 (1630)
T ss_pred ceEEEEecCC
Confidence 5677777643
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.33 E-value=1.1 Score=42.50 Aligned_cols=141 Identities=11% Similarity=0.195 Sum_probs=70.8
Q ss_pred CCCeeEEEeeCC----CcEEEEeCCCCceE--EEEeccCCceEEEEEcCCCCEEEEEecC------CeEEEEeCCCCCCC
Q psy18073 184 TKLSTIISGAYD----GEVKVWNLTSQSCV--QTYQAHDGHVRDVCFLPDGSQFLSVGID------NTIKTWSSELSESD 251 (639)
Q Consensus 184 ~~~~~l~sgs~d----g~i~vWd~~~~~~~--~~~~~h~~~V~~v~~sp~~~~l~s~s~D------g~i~iwd~~~~~~~ 251 (639)
++ .+++.|+.+ ..+.++|..+.+-. ..+......-..+.+ +++.++.|+.+ ..+.+||..+..-.
T Consensus 55 ~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DN-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TT-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CC-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 45 778888765 67888998776422 222211111222222 67778888765 45888898864321
Q ss_pred cccceEEEecCCeeEEeeecCCCCEEEEcC-----------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEE
Q psy18073 252 HIVPLHTIISKSVISSISHQRKSKIFATCG-----------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l 318 (639)
.. ........-.++. .-++.+++.|+ +.+.+||..+.+-... +......-..+.+ +++++
T Consensus 132 ~~---~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~ 204 (306)
T 3ii7_A 132 TK---PSMLTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV---KDKIF 204 (306)
T ss_dssp EE---CCCSSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEE
T ss_pred eC---CCCcCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE---CCEEE
Confidence 10 0000011111111 12566666665 2477899887753222 1111111112222 45677
Q ss_pred EEEeCCC-----cEEEEECCC
Q psy18073 319 ASCASDR-----SIILYDTRA 334 (639)
Q Consensus 319 ~s~s~Dg-----~i~iwd~~~ 334 (639)
+.|+.++ .+.+||+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp EECCEETTEEBCCEEEEETTT
T ss_pred EEeCCCCCCCCceEEEeeCCC
Confidence 7776543 466666654
No 339
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.47 E-value=4 Score=46.66 Aligned_cols=130 Identities=11% Similarity=0.138 Sum_probs=76.5
Q ss_pred cEEEEeCCCCceEEEEec-cCCceEEEEE---cCC-CCEEEEEe----------cCCeEEEEeCCCCCCCcccceEEEec
Q psy18073 197 EVKVWNLTSQSCVQTYQA-HDGHVRDVCF---LPD-GSQFLSVG----------IDNTIKTWSSELSESDHIVPLHTIIS 261 (639)
Q Consensus 197 ~i~vWd~~~~~~~~~~~~-h~~~V~~v~~---sp~-~~~l~s~s----------~Dg~i~iwd~~~~~~~~~~~~~~~~~ 261 (639)
.|++.|..+++.+..+.- ....+.+++. ..+ ..+|+.|. ..|.|.++++... ....++....
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~---kL~lv~~~~v 884 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG---KLQTVAEKEV 884 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT---EEEEEEEEEE
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC---EEEEEEEEEc
Confidence 477888777777665532 2334555543 322 46788775 2478999998732 2233455556
Q ss_pred CCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q psy18073 262 KSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331 (639)
Q Consensus 262 ~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd 331 (639)
++.+.+++-- +|.++++.+..+++|++...+.++.-..+-..|..+.... .+++++.|..-..|.+..
T Consensus 885 ~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~-~~~~I~vgD~~~Sv~~~~ 952 (1158)
T 3ei3_A 885 KGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKT-KGDFILVGDLMRSVLLLA 952 (1158)
T ss_dssp SSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEE-ETTEEEEEESSBCEEEEE
T ss_pred CCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEec-cCCEEEEEEhhheEEEEE
Confidence 7788887754 3577777777999999987654441111111122222222 345777777766666654
No 340
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.40 E-value=2.4 Score=40.02 Aligned_cols=142 Identities=11% Similarity=0.113 Sum_probs=68.9
Q ss_pred eeEEEee-CC-----CcEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEeCCCCCCCcc
Q psy18073 187 STIISGA-YD-----GEVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGID-----NTIKTWSSELSESDHI 253 (639)
Q Consensus 187 ~~l~sgs-~d-----g~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~D-----g~i~iwd~~~~~~~~~ 253 (639)
.+++.|+ .+ ..+.++|..+.+-.. .+.........+. .++..++.|+.+ ..+.++|+.+......
T Consensus 16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp EEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred EEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 5667776 33 368889987764221 1111111112222 267777888765 4688999887651101
Q ss_pred cceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 254 VPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 254 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
...........-.++.. .++.+++.|+ +.+.+||..+++-... +......-..+.+ ++++++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~ 169 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA---SGVIYCLGGYD 169 (301)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE---TTEEEEECCBC
T ss_pred EECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE---CCEEEEECCCC
Confidence 11111111111111111 2566777765 1688899887653322 1111111111222 45677777654
Q ss_pred C-----cEEEEECCC
Q psy18073 325 R-----SIILYDTRA 334 (639)
Q Consensus 325 g-----~i~iwd~~~ 334 (639)
+ .+.+||+.+
T Consensus 170 ~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 170 GLNILNSVEKYDPHT 184 (301)
T ss_dssp SSCBCCCEEEEETTT
T ss_pred CCcccceEEEEeCCC
Confidence 3 355666544
No 341
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.28 E-value=2.6 Score=39.73 Aligned_cols=141 Identities=13% Similarity=0.222 Sum_probs=70.0
Q ss_pred CCCeeEEEeeCCC-----cEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecCC-----eEEEEeCCCCCCC
Q psy18073 184 TKLSTIISGAYDG-----EVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGIDN-----TIKTWSSELSESD 251 (639)
Q Consensus 184 ~~~~~l~sgs~dg-----~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~Dg-----~i~iwd~~~~~~~ 251 (639)
++ .+++.|+.++ .+.+||..+.+-.. .+......-..+.+ +++.++.|+.++ .+.+||+.+..-.
T Consensus 61 ~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AG-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TT-EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CC-EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 45 7888887653 58889987654222 12111111222222 677888888664 5778888764321
Q ss_pred cccceEEEecCCeeEEeeecCCCCEEEEcC---------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEEEE
Q psy18073 252 HIVPLHTIISKSVISSISHQRKSKIFATCG---------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l~s 320 (639)
.. ........-.+++. -++.+++.|+ +.+.+||+.+++-... +.........+.+ ++.+++.
T Consensus 138 ~~---~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~ 210 (302)
T 2xn4_A 138 HV---APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL---NNLLYAV 210 (302)
T ss_dssp EE---CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEE
T ss_pred ec---CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE---CCEEEEE
Confidence 11 00011111111111 2556666664 1578899887653221 1111111122222 4677777
Q ss_pred EeCCC-----cEEEEECCC
Q psy18073 321 CASDR-----SIILYDTRA 334 (639)
Q Consensus 321 ~s~Dg-----~i~iwd~~~ 334 (639)
|+.++ .+.+||+.+
T Consensus 211 GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp CCBSSSSBCCCEEEEETTT
T ss_pred CCCCCCcccceEEEEeCCC
Confidence 77653 466666654
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.71 E-value=7.7 Score=37.62 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=59.4
Q ss_pred cccEEEEEECCC---CCeeEEEeeC---C----CcEEEEeCCCC--c-----eE-EEEec-cCCceEEEEEcCCCCEEEE
Q psy18073 173 KDGISCLAKHPT---KLSTIISGAY---D----GEVKVWNLTSQ--S-----CV-QTYQA-HDGHVRDVCFLPDGSQFLS 233 (639)
Q Consensus 173 ~~~V~~l~~sp~---~~~~l~sgs~---d----g~i~vWd~~~~--~-----~~-~~~~~-h~~~V~~v~~sp~~~~l~s 233 (639)
......|+|+|+ +..+.++-+. + ..|..|+.... . .+ ..+.. .......++|.|||.+.++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 356889999997 3155555442 3 56777876544 1 11 11221 1112467999999987777
Q ss_pred Eec-------------CCeEEEEeCCCCCCCc-----ccceEEEecCCeeEEeeecC-CCCEEEEcCC
Q psy18073 234 VGI-------------DNTIKTWSSELSESDH-----IVPLHTIISKSVISSISHQR-KSKIFATCGD 282 (639)
Q Consensus 234 ~s~-------------Dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 282 (639)
.+. .|.|.-.+... .... ...+.. ........++++| ++.++++-.+
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~npf~~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEG-RPPADNPFPNSPIWS-YGHRNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTSSSTTCCEEE-ECCSCCCEEEECTTTCCEEEEECC
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCCCCCCCcEEE-EccCCcceEEEeCCCCCEEEEecC
Confidence 543 24555555542 1000 001111 1223456799999 6777776543
No 343
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.08 E-value=7.7 Score=42.23 Aligned_cols=155 Identities=10% Similarity=0.090 Sum_probs=88.5
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCc
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDH 252 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~ 252 (639)
...|.++.-..+| .|-.|+.+| +..+|..+.+...........|.++.. .+|. |..++.+ -|..+|..+.....
T Consensus 62 ~~~i~~i~~d~~g--~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 62 NTRIYCGVIIDNT--YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SSCEEEEEEETTT--EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEE
T ss_pred CceEEEEEEcCCC--cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEE
Confidence 3568998888877 455555555 788998776432211112335777654 3554 4455555 57888887543210
Q ss_pred ccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeee-eecC----CccEEEEEEcCCCCcEEEEEeCCCcE
Q psy18073 253 IVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRA-FSWN----VDSLHHVQFNPIDKHILASCASDRSI 327 (639)
Q Consensus 253 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~-~~~h----~~~v~~v~~sp~~~~~l~s~s~Dg~i 327 (639)
............|.++....++.+.+...+.+..+|..+++.... .... ...|.++...+ ++..|..|.. +-+
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl 213 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYL 213 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCCccccccceeEEEEEEC-CCCEEEEEEC-CCC
Confidence 000000012346888888888888776666788888876653221 1111 22488888776 4444444443 457
Q ss_pred EEEECCCc
Q psy18073 328 ILYDTRAT 335 (639)
Q Consensus 328 ~iwd~~~~ 335 (639)
..+|..++
T Consensus 214 ~~~~~~~~ 221 (758)
T 3ott_A 214 FQYFPSTG 221 (758)
T ss_dssp EEEETTTT
T ss_pred eEEcCCCC
Confidence 78887654
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.96 E-value=8 Score=39.04 Aligned_cols=104 Identities=9% Similarity=0.152 Sum_probs=59.4
Q ss_pred CceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEe-------cCCeeEEeeecC----CCCEEEEcC----
Q psy18073 217 GHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTII-------SKSVISSISHQR----KSKIFATCG---- 281 (639)
Q Consensus 217 ~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~----~~~~l~~~~---- 281 (639)
...++|+|.|+|+++++-...+.|++++..++... .+..+. ....+..++++| ++.++++-+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~---~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVK---TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE---EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe---EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 45679999999997777654457888876543321 111111 234667899999 455555432
Q ss_pred ----------CeeEEEeCCCC--c-----eee-eee-cCCccEEEEEEcCCCCcEEEEEeCC
Q psy18073 282 ----------DQCQLWEHERN--E-----PIR-AFS-WNVDSLHHVQFNPIDKHILASCASD 324 (639)
Q Consensus 282 ----------~~i~vwd~~~~--~-----~~~-~~~-~h~~~v~~v~~sp~~~~~l~s~s~D 324 (639)
..|.-++...+ . .+. .+. ........++|.| ++.+.++.+..
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~ 164 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQ 164 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCT
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCC
Confidence 13444554322 1 111 122 1123468899999 77777765543
No 345
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.63 E-value=4.3 Score=38.39 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=66.6
Q ss_pred eeEEEeeCC----CcEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEec----C-----CeEEEEeCCCCCCC
Q psy18073 187 STIISGAYD----GEVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGI----D-----NTIKTWSSELSESD 251 (639)
Q Consensus 187 ~~l~sgs~d----g~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~----D-----g~i~iwd~~~~~~~ 251 (639)
.+++.|+.+ ..+.++|..+.+-.. .+......-..+.. ++..++.|+. + ..+.++|+.+..-.
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 566667632 368889987654221 11111111112222 6677777776 2 45788888764321
Q ss_pred cccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 252 HIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 252 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
...+... .......+. -++.+++.|+ +.+.+||..+.+-... +......-..+.+ ++.+++.|+
T Consensus 104 ~~~~~p~--~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG 176 (308)
T 1zgk_A 104 PCAPMSV--PRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAVGG 176 (308)
T ss_dssp ECCCCSS--CCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECC
T ss_pred ECCCCCc--CccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEEeC
Confidence 1111000 011111111 2566777766 2688899887653221 1111111122222 456777776
Q ss_pred CCC-----cEEEEECCC
Q psy18073 323 SDR-----SIILYDTRA 334 (639)
Q Consensus 323 ~Dg-----~i~iwd~~~ 334 (639)
.++ .+.+||+.+
T Consensus 177 ~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPER 193 (308)
T ss_dssp BCSSCBCCCEEEEETTT
T ss_pred CCCCCcCceEEEEeCCC
Confidence 553 356666544
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.58 E-value=0.71 Score=44.41 Aligned_cols=113 Identities=11% Similarity=0.026 Sum_probs=64.7
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEecc-CCceEEEEE--cC-CCCEEEEE-ecCCeEEEEeCCCCCCCcccceEEEec
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAH-DGHVRDVCF--LP-DGSQFLSV-GIDNTIKTWSSELSESDHIVPLHTIIS 261 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-~~~V~~v~~--sp-~~~~l~s~-s~Dg~i~iwd~~~~~~~~~~~~~~~~~ 261 (639)
.+++.++.||.|.-.|..+|+.+.++... ..++....- .+ ++..++.. +.||.|..+|..++...+......+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 57899999999999999999999888653 123222111 11 22333333 579999999987753221111110000
Q ss_pred CCeeEE---eee------cCCCCEEEEcC--CeeEEEeCCCCceeeeeec
Q psy18073 262 KSVISS---ISH------QRKSKIFATCG--DQCQLWEHERNEPIRAFSW 300 (639)
Q Consensus 262 ~~~v~~---~~~------~~~~~~l~~~~--~~i~vwd~~~~~~~~~~~~ 300 (639)
..++.. ... +.++ .+.+++ +.+...|..+|+.+..+..
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEEEec
Confidence 111110 000 1233 334444 3899999999999988864
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.10 E-value=11 Score=35.85 Aligned_cols=129 Identities=9% Similarity=0.157 Sum_probs=86.0
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS 274 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 274 (639)
+..|.|-|+..+..+..-.-. --+.-.+|..+.+|--+ ..++.|+|+++... +........|.--.|-.+.
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~~ViALra-g~~LQiFnletK~k-----lks~~~~e~VvfWkWis~~ 118 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSK-----MKAHTMTDDVTFWKWISLN 118 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECC---CSEEEECSSSSEEEEEE-TTEEEEEETTTTEE-----EEEEECSSCEEEEEECSSS
T ss_pred CCEEEEEECCCCCCccccccc---cceeeeCCCccEEEEec-CCeEEEechHHhhh-----hcceecCCccEEEEecCCC
Confidence 347889999886554332211 12334588888877665 78999999998544 4444455677777787777
Q ss_pred CEEEEcCCeeEEEeCCC-CceeeeeecCC----ccEEEEEEcCCCCcEEEEEeC-------CCcEEEEECC
Q psy18073 275 KIFATCGDQCQLWEHER-NEPIRAFSWNV----DSLHHVQFNPIDKHILASCAS-------DRSIILYDTR 333 (639)
Q Consensus 275 ~~l~~~~~~i~vwd~~~-~~~~~~~~~h~----~~v~~v~~sp~~~~~l~s~s~-------Dg~i~iwd~~ 333 (639)
.+-.++...|.-|++.. ..+.+.+.-|. ..|..-..++ +.++++..+- .|.+.+|..+
T Consensus 119 ~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~e 188 (365)
T 2xzh_A 119 TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVD 188 (365)
T ss_dssp EEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred eEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeec
Confidence 77777778999999974 45777777664 3677777788 6666554432 2455566554
No 348
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.71 E-value=4.5 Score=38.29 Aligned_cols=142 Identities=15% Similarity=0.187 Sum_probs=69.6
Q ss_pred CCCeeEEEeeC----C-----CcEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecC-----CeEEEEeCCC
Q psy18073 184 TKLSTIISGAY----D-----GEVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGID-----NTIKTWSSEL 247 (639)
Q Consensus 184 ~~~~~l~sgs~----d-----g~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~D-----g~i~iwd~~~ 247 (639)
++ .+++.|+. + ..+.++|..+.+-.. .+......-..+.+ +++.++.|+.+ ..+.++|+.+
T Consensus 70 ~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GG-LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TT-EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CC-EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 45 67777775 2 468889987654221 11111111222223 67777777644 3578888876
Q ss_pred CCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEE
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l 318 (639)
..-....+.. ........+.+ ++.+++.|+ +.+.+||+.+.+-... +......-..+.+ ++.++
T Consensus 147 ~~W~~~~~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iy 219 (308)
T 1zgk_A 147 DEWHLVAPML--TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL---HNCIY 219 (308)
T ss_dssp TEEEECCCCS--SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEE
T ss_pred CeEeECCCCC--ccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE---CCEEE
Confidence 4321111100 00011111122 566666665 2588899877653221 1111111122222 46677
Q ss_pred EEEeCC-----CcEEEEECCCc
Q psy18073 319 ASCASD-----RSIILYDTRAT 335 (639)
Q Consensus 319 ~s~s~D-----g~i~iwd~~~~ 335 (639)
+.|+.+ ..+.+||+.+.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTT
T ss_pred EEeCCCCCCccceEEEEeCCCC
Confidence 777665 34667776553
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.49 E-value=9.4 Score=43.66 Aligned_cols=147 Identities=10% Similarity=0.098 Sum_probs=85.9
Q ss_pred EEECCCCCeeEEEee----------CCCcEEEEeCCCCceEEEE-eccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCC
Q psy18073 179 LAKHPTKLSTIISGA----------YDGEVKVWNLTSQSCVQTY-QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL 247 (639)
Q Consensus 179 l~~sp~~~~~l~sgs----------~dg~i~vWd~~~~~~~~~~-~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~ 247 (639)
+.|..+...+|+.|. ..|.|+++++..++..... ....++|++++-- +|+ |++|- ..+|++|++..
T Consensus 837 v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~-Lla~i-g~~l~vy~l~~ 913 (1158)
T 3ei3_A 837 CKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGK-LLASI-NSTVRLYEWTT 913 (1158)
T ss_dssp ECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTE-EEEEE-TTEEEEEEECT
T ss_pred EEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCE-EEEEc-CCEEEEEECCC
Confidence 335444336888876 3478999998754432221 2346889998744 454 44433 47899999986
Q ss_pred CCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--ee--EEEeCCCCceeeeee-cCCccEEEEEEcCCCCcEEEEEe
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--QC--QLWEHERNEPIRAFS-WNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~i--~vwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
.+... .. ......+..+.....+.+++.|+- .+ .-|+...++....-+ .+...++++.|-. + ..++.+.
T Consensus 914 ~~~L~---~~-~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld-~-~t~l~aD 987 (1158)
T 3ei3_A 914 EKELR---TE-CNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD-D-DNFLGAE 987 (1158)
T ss_dssp TSCEE---EE-EEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEE-T-TEEEEEE
T ss_pred CceEE---EE-eeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEc-c-CcEEEEc
Confidence 54322 11 111111222233335677888773 34 345655444333322 3456788888875 3 4677789
Q ss_pred CCCcEEEEECCC
Q psy18073 323 SDRSIILYDTRA 334 (639)
Q Consensus 323 ~Dg~i~iwd~~~ 334 (639)
.+|.|.+.....
T Consensus 988 ~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 988 NAFNLFVCQKDS 999 (1158)
T ss_dssp TTSEEEEEEECT
T ss_pred CCCcEEEEecCC
Confidence 999999987654
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.81 E-value=20 Score=35.55 Aligned_cols=130 Identities=9% Similarity=0.154 Sum_probs=85.2
Q ss_pred CCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCcccceEEEecCCeeEEeeecCCC
Q psy18073 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTIISKSVISSISHQRKS 274 (639)
Q Consensus 195 dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 274 (639)
+..|.|-|+.++..+..-.-. --+.-.+|..+.+|--+ ..++.|+|+++... +........|.--.|-.+.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~k-----lks~~~~e~VvfWkWis~~ 117 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSK-----MKAHTMTDDVTFWKWISLN 117 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEE-----EEEEECSSCCCEEEEEETT
T ss_pred CCeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhh-----hcceecCCCceEEEecCCC
Confidence 347889999886554322211 12344688887777665 78999999997544 4444444566666676666
Q ss_pred CEEEEcCCeeEEEeCCC-CceeeeeecCC----ccEEEEEEcCCCCcEEEEEeC-------CCcEEEEECCC
Q psy18073 275 KIFATCGDQCQLWEHER-NEPIRAFSWNV----DSLHHVQFNPIDKHILASCAS-------DRSIILYDTRA 334 (639)
Q Consensus 275 ~~l~~~~~~i~vwd~~~-~~~~~~~~~h~----~~v~~v~~sp~~~~~l~s~s~-------Dg~i~iwd~~~ 334 (639)
.+-.++...|.-|++.. ..+.+.+.-|. ..|..-..++ +.++++..+- .|.+.+|..+.
T Consensus 118 ~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 118 TVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp EEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred eEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeeccc
Confidence 66667777999999974 45777777664 3677777788 6666654332 35566666554
No 351
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.71 E-value=16 Score=34.41 Aligned_cols=141 Identities=10% Similarity=0.119 Sum_probs=71.0
Q ss_pred eeEEEeeCCCcEEEEeCCCCceE-EEEeccCCceEEEEEcCCCCEEEEEec----C-------CeEEEEeCCCCCCCccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCV-QTYQAHDGHVRDVCFLPDGSQFLSVGI----D-------NTIKTWSSELSESDHIV 254 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~-~~~~~h~~~V~~v~~sp~~~~l~s~s~----D-------g~i~iwd~~~~~~~~~~ 254 (639)
.+++.|+ ..+.+||..+++=. ..+..........+...++..++.|+. + ..+.+||..+..-....
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 3555566 57999999877632 222212222333334457888888884 1 12777888764321110
Q ss_pred ceEEEecCCeeEEeeecCCCCEEEEcC------C----eeEEEeCCCCceee--eeecCCccEEEEEEcCCCCcEEEEEe
Q psy18073 255 PLHTIISKSVISSISHQRKSKIFATCG------D----QCQLWEHERNEPIR--AFSWNVDSLHHVQFNPIDKHILASCA 322 (639)
Q Consensus 255 ~~~~~~~~~~v~~~~~~~~~~~l~~~~------~----~i~vwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~~l~s~s 322 (639)
+ ......-.+++. -++.+++.|+ . .+.+||..+++-.. .+......- +++. . ++++++.|+
T Consensus 84 ~---~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~-~~~iyv~GG 156 (315)
T 4asc_A 84 P---LPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-H-MDLVYVIGG 156 (315)
T ss_dssp C---BSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-E-TTEEEEECC
T ss_pred C---CCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-E-CCEEEEEeC
Confidence 0 100000011111 2556666665 1 58889988765222 111111111 1222 2 567777777
Q ss_pred C-C-----CcEEEEECCCcc
Q psy18073 323 S-D-----RSIILYDTRATV 336 (639)
Q Consensus 323 ~-D-----g~i~iwd~~~~~ 336 (639)
. + ..+.+||..+.+
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCe
Confidence 6 2 358888887653
No 352
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.31 E-value=4.2 Score=38.38 Aligned_cols=143 Identities=15% Similarity=0.187 Sum_probs=73.9
Q ss_pred CCCeeEEEeeCC------CcEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEec---------CCeEEEEeCC
Q psy18073 184 TKLSTIISGAYD------GEVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGI---------DNTIKTWSSE 246 (639)
Q Consensus 184 ~~~~~l~sgs~d------g~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~---------Dg~i~iwd~~ 246 (639)
++ .+++.|+.+ ..+.+||..+.+=.. .+......-..+.+ +++.++.|+. -..+.+||+.
T Consensus 101 ~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 101 EG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETT
T ss_pred CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCC
Confidence 45 778888765 468899987764222 11111111122222 6677777764 3458888988
Q ss_pred CCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceee--eeecCCccEEEEEEcCCCCcE
Q psy18073 247 LSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIR--AFSWNVDSLHHVQFNPIDKHI 317 (639)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~~ 317 (639)
+..-... ........-.++.. -++.+++.|+ ..+.+||+.+++-.. .+.........+.+ ++.+
T Consensus 178 ~~~W~~~---~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i 250 (306)
T 3ii7_A 178 TETWTEL---CPMIEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV---GSIV 250 (306)
T ss_dssp TTEEEEE---CCCSSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE---TTEE
T ss_pred CCeEEEC---CCccchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE---CCEE
Confidence 6432111 01111111111112 2566677665 268899988765222 12111112222333 5678
Q ss_pred EEEEeCC-----CcEEEEECCCcc
Q psy18073 318 LASCASD-----RSIILYDTRATV 336 (639)
Q Consensus 318 l~s~s~D-----g~i~iwd~~~~~ 336 (639)
++.|+.+ ..+.+||..+.+
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEEeCcCCCeeeeeEEEEcCCCCe
Confidence 8888755 457888887643
No 353
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.27 E-value=3.4 Score=38.91 Aligned_cols=143 Identities=13% Similarity=0.217 Sum_probs=72.4
Q ss_pred CCCeeEEEeeCCC-----cEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecC-------CeEEEEeCCCCC
Q psy18073 184 TKLSTIISGAYDG-----EVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGID-------NTIKTWSSELSE 249 (639)
Q Consensus 184 ~~~~~l~sgs~dg-----~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~D-------g~i~iwd~~~~~ 249 (639)
++ .+++.|+.++ .+.+||+.+.+=.. .+........++.+ +++.++.|+.+ ..+.++|+.+..
T Consensus 108 ~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TT-EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CC-EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 45 7777777653 57788887654222 12111111122222 66777777653 358888887643
Q ss_pred CCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEEEE
Q psy18073 250 SDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l~s 320 (639)
-... ........-.++.. -++.+++.|+ +.+.+||+.+++-... +.........+.+ ++.+++.
T Consensus 185 W~~~---~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~i~v~ 257 (302)
T 2xn4_A 185 WTYI---AEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV---NGLLYVV 257 (302)
T ss_dssp EEEE---CCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEE
T ss_pred EEEC---CCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE---CCEEEEE
Confidence 2111 00011111111112 2566666665 2688999987653221 1111111112222 5678888
Q ss_pred EeCCC-----cEEEEECCCcc
Q psy18073 321 CASDR-----SIILYDTRATV 336 (639)
Q Consensus 321 ~s~Dg-----~i~iwd~~~~~ 336 (639)
|+.++ .+.+||+.+.+
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTE
T ss_pred CCcCCCcccccEEEEcCCCCe
Confidence 87664 48888887654
No 354
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.18 E-value=15 Score=34.60 Aligned_cols=142 Identities=9% Similarity=0.113 Sum_probs=67.3
Q ss_pred CCCCeeEEEeeC----CC-------cEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecC-------CeEEE
Q psy18073 183 PTKLSTIISGAY----DG-------EVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGID-------NTIKT 242 (639)
Q Consensus 183 p~~~~~l~sgs~----dg-------~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~D-------g~i~i 242 (639)
.++ .+++.|+. ++ .+.++|..+.+=.. .+......-..+.+ +++.++.|+.+ ..+.+
T Consensus 55 ~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 55 QQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp SSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred ECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 455 67777773 12 17778877654221 11111111122222 67777888764 35778
Q ss_pred EeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC--------eeEEEeCCCCceeee--eecCCccEEEEEEcC
Q psy18073 243 WSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD--------QCQLWEHERNEPIRA--FSWNVDSLHHVQFNP 312 (639)
Q Consensus 243 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp 312 (639)
+|+.+..-.... ... .......+...++.+++.|+. .+.+||..+.+-... +...... .+++..
T Consensus 132 yd~~~~~W~~~~---~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~- 205 (318)
T 2woz_A 132 YDPVAAKWSEVK---NLP-IKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIH- 205 (318)
T ss_dssp EETTTTEEEEEC---CCS-SCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-
T ss_pred EeCCCCCEeECC---CCC-CcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEEE-
Confidence 888764321100 000 011111111245666666651 588999887753222 1111111 122222
Q ss_pred CCCcEEEEEeCCC-----cEEEEECCC
Q psy18073 313 IDKHILASCASDR-----SIILYDTRA 334 (639)
Q Consensus 313 ~~~~~l~s~s~Dg-----~i~iwd~~~ 334 (639)
++.+++.|+.++ .+.+||+.+
T Consensus 206 -~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 206 -KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp -TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred -CCEEEEEcCcCCCCccceEEEEECCC
Confidence 467777776543 355666654
No 355
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.03 E-value=23 Score=34.21 Aligned_cols=108 Identities=10% Similarity=0.115 Sum_probs=57.5
Q ss_pred cccEEEEEECCC---CCeeEEEeeC-------CCcEEEEeCCCC--c--eEEE-Eec------cCCceEEEEEcCCCCEE
Q psy18073 173 KDGISCLAKHPT---KLSTIISGAY-------DGEVKVWNLTSQ--S--CVQT-YQA------HDGHVRDVCFLPDGSQF 231 (639)
Q Consensus 173 ~~~V~~l~~sp~---~~~~l~sgs~-------dg~i~vWd~~~~--~--~~~~-~~~------h~~~V~~v~~sp~~~~l 231 (639)
......|+|+|+ +..+.++-+. ...|..|++..+ . .... +.. ....-..++|.|||.+.
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Ly 144 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF 144 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEE
Confidence 456789999995 3155555433 235666666433 1 1111 111 11123579999999766
Q ss_pred EEEecC-------------CeEEEEeCCCCCCC---------cccceEEEecCCeeEEeeecC-CCCEEEEcC
Q psy18073 232 LSVGID-------------NTIKTWSSELSESD---------HIVPLHTIISKSVISSISHQR-KSKIFATCG 281 (639)
Q Consensus 232 ~s~s~D-------------g~i~iwd~~~~~~~---------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 281 (639)
++.+.. |.|.-.|....-.. ....+.. ........++|+| ++.++++-.
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-YGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-ECCSEEEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE-EcCcCccceEEECCCCCEEEEec
Confidence 665432 45666666531000 0111211 2334577899999 677666543
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.67 E-value=37 Score=36.36 Aligned_cols=61 Identities=8% Similarity=0.066 Sum_probs=35.3
Q ss_pred ccceeEEeeCCCCcceEEeccCCce--EEEecCCccc-ccee-eeee-ccccccccccCCcccccccc
Q psy18073 420 KDGISCLAKHPTKLSTIISGAYDGE--VKVWNLTSQS-CVQT-YQAH-DGHVRDTSTRPAVETTDLTR 482 (639)
Q Consensus 420 ~~~v~~v~~sp~~~~~l~sgs~Dg~--v~iWd~~~~~-~~~~-l~~h-~~~v~~v~~spdg~~~~~~~ 482 (639)
...+..+.|..+ .++++...|+. |.++|+.+|+ .+.. +... .+.+..+..++++..+.+..
T Consensus 349 ~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ 414 (711)
T 4hvt_A 349 NEVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITI 414 (711)
T ss_dssp TEEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEE
T ss_pred CCeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEE
Confidence 345677888875 46777777764 6777776664 2333 2211 23455555667776555443
No 357
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=85.79 E-value=0.53 Score=33.66 Aligned_cols=38 Identities=21% Similarity=0.439 Sum_probs=28.4
Q ss_pred CCCeeeccccCceeeeeEEEEeccCCceeeeeec-cce-ec
Q psy18073 586 GANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLM-RFD-FD 624 (639)
Q Consensus 586 ~~~~~~c~~c~~~~~~~~~~~~~~~p~~l~~~l~-rf~-~~ 624 (639)
+-.+.||++||..+--+-.+.+..= --+.+||+ ||. +.
T Consensus 27 ~~~k~FCp~CGn~TL~Rvsvsvd~~-G~~~~hl~~n~~~~n 66 (79)
T 2con_A 27 DMNRVFCGHCGNKTLKKVSVTINDD-GTLHMHFSRNPKVLN 66 (79)
T ss_dssp CSSCCSCSSSCCSCCEEEECBCCSS-CCCBCCCCCCCCCCC
T ss_pred CcccccccccCcccceEEEEEECCC-CcEEEeccCCccccc
Confidence 4467899999998666666666655 67799997 687 64
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.82 E-value=30 Score=32.06 Aligned_cols=144 Identities=11% Similarity=0.150 Sum_probs=80.1
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCccc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIV 254 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 254 (639)
.|..++..... .++. . ||.|..|-....-.+..-......|..|+...+ ..++. . ||.|..|-.........
T Consensus 25 ~i~~ia~G~~h--~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~- 96 (282)
T 3qhy_B 25 GVDAIAGGYFH--GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTV- 96 (282)
T ss_dssp SCCEEEECSSE--EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCC-
T ss_pred CCcEEEeCCCe--EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCC-
Confidence 56677665543 3443 4 899999976542211111112335777776533 33333 4 99999998765433211
Q ss_pred ceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 255 PLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 255 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
|. .....|..++.......+++ ++.+..|-....-.+..-......|..++-.. ...++ -. ||.|..|-...
T Consensus 97 P~---~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~--~~~~~-l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 97 PA---EARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV--YTALA-VK-NGGVIAWGDNY 168 (282)
T ss_dssp CG---GGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEE-EE-TTEEEEEECCT
T ss_pred Cc---ccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc--CEEEE-EE-CCEEEEecCCC
Confidence 11 11246777777777777777 77888887654222211111234577776654 22333 33 79999997654
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.08 E-value=12 Score=37.80 Aligned_cols=108 Identities=10% Similarity=0.121 Sum_probs=61.9
Q ss_pred ccEEEEEECCCCCe-eEEEeeCCCcEEEEeCCCC---ceEEEEe---------ccCCceEEEEEcCC----CCEEEEEec
Q psy18073 174 DGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQ---SCVQTYQ---------AHDGHVRDVCFLPD----GSQFLSVGI 236 (639)
Q Consensus 174 ~~V~~l~~sp~~~~-~l~sgs~dg~i~vWd~~~~---~~~~~~~---------~h~~~V~~v~~sp~----~~~l~s~s~ 236 (639)
..-..|+|.|+| . .|+.+...|.|++++.... ..+..+. +..+....|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG-~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDG-SQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSS-SCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCC-CeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 356799999998 4 4555678899999985432 1222221 11356889999996 444444332
Q ss_pred C------------CeEEEEeCCCCC--CC---cccceEEEe---cCCeeEEeeecCCCCEEEEcCC
Q psy18073 237 D------------NTIKTWSSELSE--SD---HIVPLHTII---SKSVISSISHQRKSKIFATCGD 282 (639)
Q Consensus 237 D------------g~i~iwd~~~~~--~~---~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~ 282 (639)
+ ..|.-|.+.... .. ....+.... .......|+|.|||.++++.++
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 134446654321 10 011111111 2235678999999988877664
No 360
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.18 E-value=6.7 Score=37.15 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=71.3
Q ss_pred CCCeeEEEeeCC--------CcEEEEeCCCCce--EEEEeccCCceEEEEEcCCCCEEEEEec-C-----CeEEEEeCCC
Q psy18073 184 TKLSTIISGAYD--------GEVKVWNLTSQSC--VQTYQAHDGHVRDVCFLPDGSQFLSVGI-D-----NTIKTWSSEL 247 (639)
Q Consensus 184 ~~~~~l~sgs~d--------g~i~vWd~~~~~~--~~~~~~h~~~V~~v~~sp~~~~l~s~s~-D-----g~i~iwd~~~ 247 (639)
++ .+++.|+.+ ..+.+||..+.+= +..+......-..+. .+++.++.|+. + ..+.++|+.+
T Consensus 98 ~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 45 677777743 4588999877542 211211111112222 36677778876 2 4688889876
Q ss_pred CCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC-------eeEEEeCCCCceeee--eecCCccEEEEEEcCCCCcEE
Q psy18073 248 SESDHIVPLHTIISKSVISSISHQRKSKIFATCGD-------QCQLWEHERNEPIRA--FSWNVDSLHHVQFNPIDKHIL 318 (639)
Q Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~i~vwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~~l 318 (639)
..-....+ ......-.++.. -++.+++.|+. .+.+||+.+.+-... +.........+.+ ++.++
T Consensus 175 ~~W~~~~~---~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~ 247 (315)
T 4asc_A 175 FEWKELAP---MQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL---VGTLY 247 (315)
T ss_dssp TEEEECCC---CSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEE
T ss_pred CeEEECCC---CCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE---CCEEE
Confidence 43211110 111111111112 25566666651 588899987753222 1111111122222 56777
Q ss_pred EEEeCCC--------------cEEEEECCCcc
Q psy18073 319 ASCASDR--------------SIILYDTRATV 336 (639)
Q Consensus 319 ~s~s~Dg--------------~i~iwd~~~~~ 336 (639)
+.|+.++ .|.+||+.+.+
T Consensus 248 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 248 AIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EECCccccCcCCccccccccCcEEEecCCCCh
Confidence 7777642 36678876643
No 361
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=80.66 E-value=14 Score=35.55 Aligned_cols=53 Identities=6% Similarity=-0.023 Sum_probs=26.2
Q ss_pred eeEEEeCCCCce--eeeeecCCccEEEEEEcCCCCcEEEEEeCCC------cEEEEECCCcccc
Q psy18073 283 QCQLWEHERNEP--IRAFSWNVDSLHHVQFNPIDKHILASCASDR------SIILYDTRATVLS 338 (639)
Q Consensus 283 ~i~vwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg------~i~iwd~~~~~~~ 338 (639)
.+.+||+.+.+- +..+......-.++. . ++++++.|+.++ .|.++++++++..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--W-NNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--E-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--e-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 467899887652 222222111112222 2 677888888653 3555577776654
No 362
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.34 E-value=10 Score=35.93 Aligned_cols=142 Identities=11% Similarity=0.140 Sum_probs=69.3
Q ss_pred CCCeeEEEeeCC-------CcEEEEeCCCCceEE--EEeccCCceEEEEEcCCCCEEEEEecC------CeEEEEeCCCC
Q psy18073 184 TKLSTIISGAYD-------GEVKVWNLTSQSCVQ--TYQAHDGHVRDVCFLPDGSQFLSVGID------NTIKTWSSELS 248 (639)
Q Consensus 184 ~~~~~l~sgs~d-------g~i~vWd~~~~~~~~--~~~~h~~~V~~v~~sp~~~~l~s~s~D------g~i~iwd~~~~ 248 (639)
++ .+++.|+.+ ..+.++|..+.+=.. .+......-..+. .+++.++.|+.+ ..+.++|+.+.
T Consensus 109 ~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 45 777777754 247788887654221 1111101111122 367777777642 35888998864
Q ss_pred CCCcccceEEEecCCeeEEeeecCCCCEEEEcC-------CeeEEEeCCCCceee--eeecCCccEEEEEEcCCCCcEEE
Q psy18073 249 ESDHIVPLHTIISKSVISSISHQRKSKIFATCG-------DQCQLWEHERNEPIR--AFSWNVDSLHHVQFNPIDKHILA 319 (639)
Q Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~vwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~~l~ 319 (639)
.-... ........-.+++. -++.+++.|+ ..+.+||+.+.+-.. .+.........+.+ ++.+++
T Consensus 186 ~W~~~---~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v 258 (318)
T 2woz_A 186 DWKDL---APMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL---AGSLYA 258 (318)
T ss_dssp EEEEE---CCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE---TTEEEE
T ss_pred EEEEC---CCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE---CCEEEE
Confidence 32111 00111111111222 2556666665 157789988765322 12111111122222 567777
Q ss_pred EEeCC--------------CcEEEEECCCc
Q psy18073 320 SCASD--------------RSIILYDTRAT 335 (639)
Q Consensus 320 s~s~D--------------g~i~iwd~~~~ 335 (639)
.|+.+ ..+.+||+.+.
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 77754 34677777654
No 363
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=79.53 E-value=39 Score=31.26 Aligned_cols=144 Identities=13% Similarity=0.177 Sum_probs=76.8
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCCccc
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIV 254 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 254 (639)
.|..++..... .++. . ||.|..|-....-.+..-..-...|..|+...+ ..+.-. ||.|..|-.........
T Consensus 64 ~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~- 135 (282)
T 3qhy_B 64 GVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV- 135 (282)
T ss_dssp CCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-
T ss_pred CEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-
Confidence 56777776553 3444 4 899999976542111111111346777776543 333334 99999998765433211
Q ss_pred ceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 255 PLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 255 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
+. .....|..++......++++ ++.+..|-......+..-..-...|..|+-.. ...++. .||.|..|-...
T Consensus 136 ~~---~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~--~hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 136 PA---EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGI--FHSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp CG---GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS--SEEEEE--ETTEEEEEECCT
T ss_pred Cc---cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecC--CEEEEE--ECCeEEEEECCC
Confidence 11 11234556655555555555 56777776543221111111134677777654 233443 599999996543
No 364
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.13 E-value=29 Score=38.81 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=29.5
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEeCCCCCCC
Q psy18073 218 HVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESD 251 (639)
Q Consensus 218 ~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~~~ 251 (639)
.+.+++..++..++++-+.|+++|+|++.++++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence 4677788888899999999999999999987654
No 365
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=76.82 E-value=25 Score=33.69 Aligned_cols=63 Identities=10% Similarity=0.225 Sum_probs=34.5
Q ss_pred CCCeeEEEeeCC-CcEEEEeCCC--C--ceEEEEe-ccCCceEEEEEcCCCCEEEEEec-C---------CeEEEEeCCC
Q psy18073 184 TKLSTIISGAYD-GEVKVWNLTS--Q--SCVQTYQ-AHDGHVRDVCFLPDGSQFLSVGI-D---------NTIKTWSSEL 247 (639)
Q Consensus 184 ~~~~~l~sgs~d-g~i~vWd~~~--~--~~~~~~~-~h~~~V~~v~~sp~~~~l~s~s~-D---------g~i~iwd~~~ 247 (639)
++ .+++.|+.+ ..+.++|..+ . +.+..+. .....-.++.+ +++.++.||. + ..+.++|+.+
T Consensus 19 ~~-~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 ND-TVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TT-EEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CC-EEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 45 677777643 5688889863 2 2222222 11111222222 6777777776 2 4688888876
Q ss_pred CC
Q psy18073 248 SE 249 (639)
Q Consensus 248 ~~ 249 (639)
..
T Consensus 96 ~~ 97 (357)
T 2uvk_A 96 NS 97 (357)
T ss_dssp TE
T ss_pred Cc
Confidence 43
No 366
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=76.41 E-value=11 Score=38.60 Aligned_cols=66 Identities=12% Similarity=0.028 Sum_probs=43.7
Q ss_pred ceeEEeeCCCCcceEEeccCCceEEEecCCcc----------ccceeee-----eeccccccccccCCcccccccccccc
Q psy18073 422 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ----------SCVQTYQ-----AHDGHVRDTSTRPAVETTDLTRSFGW 486 (639)
Q Consensus 422 ~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~----------~~~~~l~-----~h~~~v~~v~~spdg~~~~~~~~~~~ 486 (639)
.....+|.++| .-..|---|..|.-|++... ..+..+. +|......-.-.|||+.+.....++-
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~sk 457 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSK 457 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCT
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccccc
Confidence 34668899999 77777778999999998753 2333333 55544445556778877666555544
Q ss_pred cC
Q psy18073 487 ES 488 (639)
Q Consensus 487 ~~ 488 (639)
|+
T Consensus 458 dr 459 (638)
T 3sbq_A 458 DR 459 (638)
T ss_dssp TS
T ss_pred cc
Confidence 43
No 367
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=74.28 E-value=44 Score=33.58 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=59.2
Q ss_pred CceEEEEEcCCCC-EEEEEecCCeEEEEeCCCCCCCcccceEEE----------ecCCeeEEeeecCC----CCEEEEcC
Q psy18073 217 GHVRDVCFLPDGS-QFLSVGIDNTIKTWSSELSESDHIVPLHTI----------ISKSVISSISHQRK----SKIFATCG 281 (639)
Q Consensus 217 ~~V~~v~~sp~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~----~~~l~~~~ 281 (639)
..-+.|+|.|||. .|+.+...|.|++++....... .++..+ .....+..++++|+ +.++++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~--~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFK--EPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCS--SCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeee--eeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 3457899999996 4555677899999975432111 011111 11346788999996 44444321
Q ss_pred --------------CeeEEEeCCC----------Cceeeeee--cCCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 282 --------------DQCQLWEHER----------NEPIRAFS--WNVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 282 --------------~~i~vwd~~~----------~~~~~~~~--~h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
..|.-|.+.. .+.+..+. ........|+|.| |+.+.++.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC
Confidence 1233344432 12222222 1223457899999 777777766543
No 368
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=73.56 E-value=24 Score=37.77 Aligned_cols=149 Identities=10% Similarity=0.191 Sum_probs=76.6
Q ss_pred CCCeeEEEeeCCC------cEEEEeCCCCc--eEEEEeccCCceEEEEEcCCCCEEEEEecCC--eEEEEeCCCCCCCcc
Q psy18073 184 TKLSTIISGAYDG------EVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPDGSQFLSVGIDN--TIKTWSSELSESDHI 253 (639)
Q Consensus 184 ~~~~~l~sgs~dg------~i~vWd~~~~~--~~~~~~~h~~~V~~v~~sp~~~~l~s~s~Dg--~i~iwd~~~~~~~~~ 253 (639)
++ .+++.|+.++ .+.+||..+.+ .+..+...... .+++...+++.++.||.++ .+.+||..+..-...
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEEC
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEc
Confidence 66 7888887543 57888887743 22222111111 2233324788888888765 688999886432111
Q ss_pred cceEEEe-cCCeeEEeeecCC-CCEEEEcCC---------eeEEEeCCCCce-----eeeeec---C-CccEEEEEEcCC
Q psy18073 254 VPLHTII-SKSVISSISHQRK-SKIFATCGD---------QCQLWEHERNEP-----IRAFSW---N-VDSLHHVQFNPI 313 (639)
Q Consensus 254 ~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~---------~i~vwd~~~~~~-----~~~~~~---h-~~~v~~v~~sp~ 313 (639)
.+..... ......++.+..+ +.+++.|+. .+.+||+.+.+- -..+.. . ......+.+.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-- 606 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT-- 606 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE--
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC--
Confidence 0000000 0111222444444 666666651 588899887761 111111 1 1111222222
Q ss_pred CCcEEEEEeCC--------CcEEEEECCCcc
Q psy18073 314 DKHILASCASD--------RSIILYDTRATV 336 (639)
Q Consensus 314 ~~~~l~s~s~D--------g~i~iwd~~~~~ 336 (639)
++.+++.|+.+ ..|.+||+.+.+
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 36778888753 458888887654
No 369
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=72.83 E-value=1.1e+02 Score=33.01 Aligned_cols=149 Identities=9% Similarity=0.082 Sum_probs=84.2
Q ss_pred cEEEEEECCCCCeeEE-EeeCCCcEEEEeCCCCceEEEEec----cCCceEEEEEcCCCCEEEEEecCCeEEEEeCCCCC
Q psy18073 175 GISCLAKHPTKLSTII-SGAYDGEVKVWNLTSQSCVQTYQA----HDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~-sgs~dg~i~vWd~~~~~~~~~~~~----h~~~V~~v~~sp~~~~l~s~s~Dg~i~iwd~~~~~ 249 (639)
.|.++...++| .+-+ .|+. +-|..+|..+++... +.. ....+.++....+|.+.+.. .. -+..+|..+..
T Consensus 473 ~i~~i~~d~~g-~lWi~~~t~-~Gl~~~d~~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~ 547 (758)
T 3ott_A 473 FINQIIPDNEG-NVWVLLYNN-KGIDKINPRTREVTK-LFADELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDES 547 (758)
T ss_dssp CEEEEEECTTS-CEEEEETTC-SSEEEEETTTTEEEE-ECTTTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CC
T ss_pred eeeeEEEcCCC-CEEEEccCC-CCcEEEeCCCCceEE-ecCCCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCc
Confidence 59999999998 5555 3444 458888987765443 321 13467888888888776643 44 48888877644
Q ss_pred CCcccceEEEecCCeeEEeeecCCCCEEEEcCCeeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEE
Q psy18073 250 SDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329 (639)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~i 329 (639)
.. ......+ ....+.++... +|.+.+++...+..+|..+.+... +......+....+...+| .|.-|+.+| +..
T Consensus 548 ~~-~~~~~gl-~~~~i~~i~~~-~g~lWi~t~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G-~l~fG~~~G-l~~ 621 (758)
T 3ott_A 548 QQ-SISFGSF-SNNEILSMTCV-KNSIWVSTTNGLWIIDRKTMDARQ-QNMTNKRFTSLLFDPKED-CVYLGGADG-FGI 621 (758)
T ss_dssp CC-BCCCCC----CCEEEEEEE-TTEEEEEESSCEEEEETTTCCEEE-C--CCCCCSEEEEETTTT-EEEEECBSE-EEE
T ss_pred eE-EecccCC-CccceEEEEEC-CCCEEEECCCCeEEEcCCCceeEE-ecCCCCceeeeEEECCCC-cEEEecCCc-eEE
Confidence 32 1111111 12456677654 777777777788889988765322 211112233344433245 455667777 555
Q ss_pred EECCC
Q psy18073 330 YDTRA 334 (639)
Q Consensus 330 wd~~~ 334 (639)
++...
T Consensus 622 f~p~~ 626 (758)
T 3ott_A 622 SHSNL 626 (758)
T ss_dssp EEC--
T ss_pred EChhh
Confidence 66653
No 370
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=72.19 E-value=69 Score=30.52 Aligned_cols=108 Identities=7% Similarity=-0.078 Sum_probs=58.5
Q ss_pred eeEEEeeCCCcEEEEeCCCCceEEEEeccC--Cc-----eEEEEEc-----CCCCEEEEEecCCeEEEEeCCCCCCCccc
Q psy18073 187 STIISGAYDGEVKVWNLTSQSCVQTYQAHD--GH-----VRDVCFL-----PDGSQFLSVGIDNTIKTWSSELSESDHIV 254 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~~~~~~~~~~h~--~~-----V~~v~~s-----p~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 254 (639)
..+.+|+.+|.+...|+.+|+.+..+.... +. ..|.... ..+..++.+..+..+.+-+ +++. .+..
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~ 189 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNV 189 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-CCCC
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-eEEE
Confidence 688999999999999999999999885321 10 1111111 1245777788888888777 4443 4433
Q ss_pred ceEEEecCCee----EEeeecCCCCEEEEcC-CeeEEEeCCCCceee
Q psy18073 255 PLHTIISKSVI----SSISHQRKSKIFATCG-DQCQLWEHERNEPIR 296 (639)
Q Consensus 255 ~~~~~~~~~~v----~~~~~~~~~~~l~~~~-~~i~vwd~~~~~~~~ 296 (639)
..........- ..-..+.|+.++++.. +.+.-+|..+|+.+.
T Consensus 190 ~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 190 TYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred ecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 33322211100 0001122345444433 366666666666554
No 371
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=71.50 E-value=59 Score=30.40 Aligned_cols=135 Identities=6% Similarity=0.009 Sum_probs=70.8
Q ss_pred EEECCCCCeeEEEeeC-C-------------CcEEEEeCCCCceEEEEeccCCceEEEEEcCCCCEEEEEe--cC--CeE
Q psy18073 179 LAKHPTKLSTIISGAY-D-------------GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG--ID--NTI 240 (639)
Q Consensus 179 l~~sp~~~~~l~sgs~-d-------------g~i~vWd~~~~~~~~~~~~h~~~V~~v~~sp~~~~l~s~s--~D--g~i 240 (639)
--++++| .+|.-... + ..|+..++..++... +. ... +..|++++++|+-.. .+ ..|
T Consensus 58 ~~i~~~g-~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~--~~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADK-NYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LD--PDP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECS-SEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EE--CSC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcC-CEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-ee--cCC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 3457777 55554433 2 467888877665333 32 122 236778888888765 33 445
Q ss_pred EEEeCCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcC-C--eeEEEeCCCCceeeeeecCCccEEEEEEcCCCCcE
Q psy18073 241 KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCG-D--QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHI 317 (639)
Q Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--~i~vwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~ 317 (639)
..-++..... ..+... .+ .++++++..|.-.+ + .|.+-++..+.....+.+ ... ..+.| ++.+
T Consensus 132 y~~~~dGs~~------~~lt~~-~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P-~g~~ 197 (302)
T 3s25_A 132 YRIRIDGEEK------KKIKNH-YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVL-DDTN 197 (302)
T ss_dssp EEEETTSCCC------EEEESS-CC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEE-ETTE
T ss_pred EEEECCCCCe------EEEeCC-Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeee-cCCE
Confidence 5555553221 112111 12 45677777666444 2 788888876665444332 222 23568 4555
Q ss_pred EEEEeCC-C-cEEEEECC
Q psy18073 318 LASCASD-R-SIILYDTR 333 (639)
Q Consensus 318 l~s~s~D-g-~i~iwd~~ 333 (639)
|+-...+ + .|..-++.
T Consensus 198 iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp EEEEEGGGTTEEEEECSS
T ss_pred EEEEEcCCCcEEEEEECC
Confidence 5544433 2 34444444
No 372
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=69.82 E-value=61 Score=35.31 Aligned_cols=62 Identities=11% Similarity=0.140 Sum_probs=40.6
Q ss_pred cccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc-------CCceEEEEEcCC-CCEEEEEe
Q psy18073 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-------DGHVRDVCFLPD-GSQFLSVG 235 (639)
Q Consensus 173 ~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-------~~~V~~v~~sp~-~~~l~s~s 235 (639)
.+.|.+|+++|..+..+..++..|.|...+ +.|+.-..+..+ ...|.+|++.|. ...++.+.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 458999999998667777788778776665 345443333322 246999999984 34444443
No 373
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.40 E-value=16 Score=40.74 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=33.3
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEE
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 212 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~ 212 (639)
..|.+++..++. .+++|-+.|+++|||++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTT-TEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCC-cEEEEEECCCEEEEEECCCCCeEeee
Confidence 357788888887 89999999999999999999998875
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.31 E-value=90 Score=30.28 Aligned_cols=68 Identities=7% Similarity=-0.013 Sum_probs=36.1
Q ss_pred ccEEEEEECCCC-CeeEEEeeCCCcEEEEeCCCCceEEEEec-------------------cCCceEEEEEcCC-CCEEE
Q psy18073 174 DGISCLAKHPTK-LSTIISGAYDGEVKVWNLTSQSCVQTYQA-------------------HDGHVRDVCFLPD-GSQFL 232 (639)
Q Consensus 174 ~~V~~l~~sp~~-~~~l~sgs~dg~i~vWd~~~~~~~~~~~~-------------------h~~~V~~v~~sp~-~~~l~ 232 (639)
..|.++++.|.. +..|..++..+.|...+ +.|+.-..+.. ....|.+|.+.|. ...|.
T Consensus 115 ~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 115 DHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp CEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred cceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 368899998732 24555555556555543 22332222211 1235889999883 34455
Q ss_pred EEecCCeEEE
Q psy18073 233 SVGIDNTIKT 242 (639)
Q Consensus 233 s~s~Dg~i~i 242 (639)
.+..++.|..
T Consensus 194 vg~~~ggl~~ 203 (394)
T 3b7f_A 194 IGMSSGGVFE 203 (394)
T ss_dssp EEEETBEEEE
T ss_pred EEECCCCEEE
Confidence 4544444433
No 375
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=67.60 E-value=51 Score=38.21 Aligned_cols=181 Identities=9% Similarity=0.064 Sum_probs=100.5
Q ss_pred hhhhhhhc-cccccccccc----cccEEEEEECCCCCeeEEE-ee------CCCcEEEEeCCCCceEEEEeccCCceEEE
Q psy18073 155 TKLERVFA-KPFVANLDGH----KDGISCLAKHPTKLSTIIS-GA------YDGEVKVWNLTSQSCVQTYQAHDGHVRDV 222 (639)
Q Consensus 155 ~~~~~~~~-~~~~~~l~~H----~~~V~~l~~sp~~~~~l~s-gs------~dg~i~vWd~~~~~~~~~~~~h~~~V~~v 222 (639)
+-.|++.. ..+++.+.-| ...|..-.-+++. ++++. |- -.|.+.+|.++.+ ..+.+.||.+....+
T Consensus 127 VyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~-kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~ 204 (1630)
T 1xi4_A 127 VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQ-KWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQF 204 (1630)
T ss_pred EEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCC-CeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhhee
Confidence 45566542 2344444434 3467777888888 66553 32 3588899997654 345567777665555
Q ss_pred EEc--CC-CCEEEEEec---CCeEEEEeCCCC-CCCcccceE-------EEecCCeeEEeeecCCCC--EEEEcCCeeEE
Q psy18073 223 CFL--PD-GSQFLSVGI---DNTIKTWSSELS-ESDHIVPLH-------TIISKSVISSISHQRKSK--IFATCGDQCQL 286 (639)
Q Consensus 223 ~~s--p~-~~~l~s~s~---Dg~i~iwd~~~~-~~~~~~~~~-------~~~~~~~v~~~~~~~~~~--~l~~~~~~i~v 286 (639)
... +. ...+..+.. .+.+.|-++... .....++.. ......-..++..++.-. ++++-.|.+++
T Consensus 205 ~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~ 284 (1630)
T 1xi4_A 205 KMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHL 284 (1630)
T ss_pred ccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEE
Confidence 442 22 223333322 268888888653 111111110 001123344555666433 34444469999
Q ss_pred EeCCCCceeeeeecCCccEEEEEEcCCCCcEEEEEeCCCcEEEEECCCcccc
Q psy18073 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLS 338 (639)
Q Consensus 287 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~~~~~ 338 (639)
+|+.++.++..-+-...+|...+.+...+.++ .....|.|.--.+.....+
T Consensus 285 ~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~-~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 285 YDLETGTCIYMNRISGETIFVTAPHEATAGII-GVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred EecccchhhhhccccCCceEEeccCCCCCceE-EEcCCceEEEEEEccchhh
Confidence 99999998877666666666655554233333 3457777766666554443
No 376
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=66.58 E-value=92 Score=29.77 Aligned_cols=108 Identities=14% Similarity=0.116 Sum_probs=58.2
Q ss_pred ccccEEEEEECCC----CCeeEEEe--eCCCcEEEEeCCCC----------ceEE-EEe-ccCCceEEEEEcCCCCEEEE
Q psy18073 172 HKDGISCLAKHPT----KLSTIISG--AYDGEVKVWNLTSQ----------SCVQ-TYQ-AHDGHVRDVCFLPDGSQFLS 233 (639)
Q Consensus 172 H~~~V~~l~~sp~----~~~~l~sg--s~dg~i~vWd~~~~----------~~~~-~~~-~h~~~V~~v~~sp~~~~l~s 233 (639)
.......|+|+|+ + .+.++- ..++.|.-|.+..+ +.+. .+. +....-..|+|.|||.+.++
T Consensus 78 g~~GllGia~~Pdf~~~g-~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 78 GEGGLLGIALSPDYASDH-MVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp TTBSEEEEEECTTHHHHC-EEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred CCCCceeeEeccccccCC-EEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 4567899999996 4 444432 24456666665541 1111 222 11123467999999988887
Q ss_pred Eec-------------CCeEEEEeCCCCC----CCcccceEEEecCCeeEEeeecCCCCEEEEcC
Q psy18073 234 VGI-------------DNTIKTWSSELSE----SDHIVPLHTIISKSVISSISHQRKSKIFATCG 281 (639)
Q Consensus 234 ~s~-------------Dg~i~iwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 281 (639)
.+. -|.|.-.+....- ......+.. .+......++|+|++.++++-.
T Consensus 157 ~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a-~G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 157 TGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYS-YGHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp CBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEE-BCCSBCCEEEECTTCCEEEEEC
T ss_pred ECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEe-eCCCCcceEEECCCCCEEEEec
Confidence 653 2444444443210 000001111 1223466789999888877654
No 377
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.17 E-value=99 Score=29.98 Aligned_cols=159 Identities=9% Similarity=0.076 Sum_probs=92.7
Q ss_pred cEEEEEECCCCCeeEEEee--------------CCCcEEEEeCCCC--ceEEEEec------cCCceEEEEEc---CC--
Q psy18073 175 GISCLAKHPTKLSTIISGA--------------YDGEVKVWNLTSQ--SCVQTYQA------HDGHVRDVCFL---PD-- 227 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs--------------~dg~i~vWd~~~~--~~~~~~~~------h~~~V~~v~~s---p~-- 227 (639)
.|..+...+.+.-+++=.+ .--+|.+||+.+. +.++++.- ....+..+++. |+
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 6777777777622222211 1126889999999 88888743 23457888887 22
Q ss_pred --CCEE-EEEecCCeEEEEeCCCCCCCccc-----c--e-------EEEecCCeeEEeeecCC----CCEEEEcC-CeeE
Q psy18073 228 --GSQF-LSVGIDNTIKTWSSELSESDHIV-----P--L-------HTIISKSVISSISHQRK----SKIFATCG-DQCQ 285 (639)
Q Consensus 228 --~~~l-~s~s~Dg~i~iwd~~~~~~~~~~-----~--~-------~~~~~~~~v~~~~~~~~----~~~l~~~~-~~i~ 285 (639)
+.+. ++=+..+-|.|+|+.+++..+.. + . ..+.....+..++.+|+ ++.|.-.. ..-+
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 2333 33345778999999886543222 0 0 11112347888999997 55544333 3444
Q ss_pred EEeCCC-----Cc---eeeeeecCC---ccEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q psy18073 286 LWEHER-----NE---PIRAFSWNV---DSLHHVQFNPIDKHILASCASDRSIILYDTRA 334 (639)
Q Consensus 286 vwd~~~-----~~---~~~~~~~h~---~~v~~v~~sp~~~~~l~s~s~Dg~i~iwd~~~ 334 (639)
+|.+.+ .. .++.+ |.. ..-..+++.+.+|.++++--....|..|+..+
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 554432 11 12222 222 23345667643788888888889999999865
No 378
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=63.93 E-value=59 Score=34.76 Aligned_cols=150 Identities=11% Similarity=0.048 Sum_probs=78.3
Q ss_pred CCCCeeEEEeeCC----CcEEEEeCCCCceEEEE--------eccCCceEEEEEcCCCCEEEEEecCC------eEEEEe
Q psy18073 183 PTKLSTIISGAYD----GEVKVWNLTSQSCVQTY--------QAHDGHVRDVCFLPDGSQFLSVGIDN------TIKTWS 244 (639)
Q Consensus 183 p~~~~~l~sgs~d----g~i~vWd~~~~~~~~~~--------~~h~~~V~~v~~sp~~~~l~s~s~Dg------~i~iwd 244 (639)
.++ .+++.|+.+ ..+.+||..+++-...- ......-..+.+..+++.++.||.++ .+.+||
T Consensus 396 ~~~-~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGN-DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSS-CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECC-EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 345 677778754 46888888766422211 11111122233322777888887543 477888
Q ss_pred CCCCCCCcccceEEEecCCeeEEeeecCCCCEEEEcCC----eeEEEeCCCCceeeee-----ecCCccEEEEEEcCCCC
Q psy18073 245 SELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGD----QCQLWEHERNEPIRAF-----SWNVDSLHHVQFNPIDK 315 (639)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~i~vwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~ 315 (639)
..+..-... ........-.+.+.-.++.+++.|+. .+.+||..+++-...- ......-.++.+...++
T Consensus 475 ~~t~~W~~~---~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 475 MKTREWSMI---KSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTTTEEEEC---CCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred CCCCcEEEC---CCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 876421111 01111111112222237778887773 6889998876532211 11111222355555236
Q ss_pred cEEEEEeC--C-----CcEEEEECCCcc
Q psy18073 316 HILASCAS--D-----RSIILYDTRATV 336 (639)
Q Consensus 316 ~~l~s~s~--D-----g~i~iwd~~~~~ 336 (639)
.+++.|+. + ..+.+||+.+..
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 78888876 2 347888887654
No 379
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.34 E-value=36 Score=34.92 Aligned_cols=71 Identities=10% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCeeEEeeecCCCCEEEEcCC---eeEEEeCCCC------ce-------eeeeecCCccEEEEEEcCCCCcEEEEEeCCC
Q psy18073 262 KSVISSISHQRKSKIFATCGD---QCQLWEHERN------EP-------IRAFSWNVDSLHHVQFNPIDKHILASCASDR 325 (639)
Q Consensus 262 ~~~v~~~~~~~~~~~l~~~~~---~i~vwd~~~~------~~-------~~~~~~h~~~v~~v~~sp~~~~~l~s~s~Dg 325 (639)
......+..+|||+++++++. ++.++|++.- +. ....+... .....+|.+ +|+...|--.|.
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl-GPlHt~Fd~-~G~aYTtlfidS 399 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL-GPLHTTFDG-RGNAYTTLFIDS 399 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS-CEEEEEECS-SSEEEEEETTTT
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC-cccEEEECC-CCceEeeeeecc
Confidence 345567889999999999985 8999998742 11 22222222 346689999 777777777899
Q ss_pred cEEEEECCC
Q psy18073 326 SIILYDTRA 334 (639)
Q Consensus 326 ~i~iwd~~~ 334 (639)
.|.-|++..
T Consensus 400 qvvkWni~~ 408 (638)
T 3sbq_A 400 QVVKWNMEE 408 (638)
T ss_dssp EEEEEEHHH
T ss_pred eEEEEeccH
Confidence 999999865
No 380
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=53.99 E-value=6.5 Score=23.69 Aligned_cols=17 Identities=29% Similarity=0.710 Sum_probs=11.5
Q ss_pred eeCCCCeeeccccCcee
Q psy18073 583 TLDGANQYFCDKCGKKC 599 (639)
Q Consensus 583 ~l~~~~~~~c~~c~~~~ 599 (639)
.++....|.|++|++..
T Consensus 3 ~~~~~~~~~C~~C~~~i 19 (39)
T 2i5o_A 3 HMAAEDQVPCEKCGSLV 19 (39)
T ss_dssp ---CCCEEECTTTCCEE
T ss_pred CCCcCCCcccccccCcC
Confidence 34556779999999873
No 381
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=49.45 E-value=61 Score=33.65 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=41.5
Q ss_pred cEEEEEECCCCCeeEEEeeCC------------CcEEEEeCCCCceEEEEecc-CCceEEEEEcCCCCEEEEE
Q psy18073 175 GISCLAKHPTKLSTIISGAYD------------GEVKVWNLTSQSCVQTYQAH-DGHVRDVCFLPDGSQFLSV 234 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~d------------g~i~vWd~~~~~~~~~~~~h-~~~V~~v~~sp~~~~l~s~ 234 (639)
..-.|+|+|.| .+++.-..+ ..+.+.+..+++....+.++ ...++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45789999999 655553322 23555666777776666655 4579999999999888765
No 382
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.36 E-value=10 Score=43.43 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=31.6
Q ss_pred ceeEEeeCCCCcceEEeccCCceEEEecCCccccceeee
Q psy18073 422 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 460 (639)
Q Consensus 422 ~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~ 460 (639)
.+.+++..++. .++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667777 899999999999999999999988753
No 383
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.90 E-value=82 Score=32.42 Aligned_cols=61 Identities=10% Similarity=0.061 Sum_probs=43.1
Q ss_pred ccEEEEEECCCCCeeEE-EeeC-----------CCcEEEEeCCCCceEEEEecc-CCceEEEEEcCCCCEEEEEe
Q psy18073 174 DGISCLAKHPTKLSTII-SGAY-----------DGEVKVWNLTSQSCVQTYQAH-DGHVRDVCFLPDGSQFLSVG 235 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~-sgs~-----------dg~i~vWd~~~~~~~~~~~~h-~~~V~~v~~sp~~~~l~s~s 235 (639)
+....|+|+++| .+.+ |=.. ...|..++..+++....+.+. ...++.++|+||++.|+.+-
T Consensus 476 nsPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 467899999999 6655 4211 125677777778766666543 35689999999999887654
No 384
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=44.19 E-value=33 Score=36.40 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=31.4
Q ss_pred ccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec
Q psy18073 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 214 (639)
Q Consensus 174 ~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~ 214 (639)
..|.++.+. . .++++-+.|.++|+||+.+++++.+..-
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457777664 4 6999999999999999999998887643
No 385
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=42.78 E-value=20 Score=37.96 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=30.5
Q ss_pred cceeEEeeCCCCcceEEeccCCceEEEecCCccccceeeee
Q psy18073 421 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 461 (639)
Q Consensus 421 ~~v~~v~~sp~~~~~l~sgs~Dg~v~iWd~~~~~~~~~l~~ 461 (639)
..|.++.+. . .++++-+.|.++|+|++++++++.+..-
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 345655553 4 7999999999999999999999887643
No 386
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=41.00 E-value=3.6e+02 Score=28.79 Aligned_cols=59 Identities=17% Similarity=0.149 Sum_probs=37.5
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEecc-------CCceEEEEEcC-CC-CEEEEE
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH-------DGHVRDVCFLP-DG-SQFLSV 234 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~h-------~~~V~~v~~sp-~~-~~l~s~ 234 (639)
.|..|+++|..+..+..+...|.|..++ ..|+.-..+..+ ...|.+|+++| +. ..++..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 7999999998656677777667766665 334433333222 24599999998 33 344443
No 387
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.61 E-value=19 Score=41.35 Aligned_cols=38 Identities=24% Similarity=0.358 Sum_probs=31.4
Q ss_pred cEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEe
Q psy18073 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 213 (639)
Q Consensus 175 ~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~ 213 (639)
.|.+++..++. .++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556666776 799999999999999999999988763
No 388
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=39.21 E-value=13 Score=31.44 Aligned_cols=13 Identities=23% Similarity=0.938 Sum_probs=11.4
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
+++.|+|++|++.
T Consensus 56 ~~g~~~CekC~~~ 68 (172)
T 3u50_C 56 HGDSFFCESCQQF 68 (172)
T ss_dssp TTTEEEETTTTEE
T ss_pred CCCeEECCCCCCC
Confidence 5678999999987
No 389
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=36.70 E-value=11 Score=22.10 Aligned_cols=15 Identities=27% Similarity=0.658 Sum_probs=12.6
Q ss_pred eCCCCeeeccccCce
Q psy18073 584 LDGANQYFCDKCGKK 598 (639)
Q Consensus 584 l~~~~~~~c~~c~~~ 598 (639)
|.|+..|.|+.|++.
T Consensus 3 ~~gekp~~C~~CgK~ 17 (36)
T 1fv5_A 3 LLKPARFMCLPCGIA 17 (36)
T ss_dssp SSSCCCCEETTTTEE
T ss_pred CCCccCeECCCCCCc
Confidence 567788999999976
No 390
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=33.98 E-value=3.2e+02 Score=26.16 Aligned_cols=50 Identities=4% Similarity=0.022 Sum_probs=26.5
Q ss_pred eeEEEeeCCCcEEEEeCCC-CceEEEE--eccCCceEEEEEcC--CCCEEEEEecCC
Q psy18073 187 STIISGAYDGEVKVWNLTS-QSCVQTY--QAHDGHVRDVCFLP--DGSQFLSVGIDN 238 (639)
Q Consensus 187 ~~l~sgs~dg~i~vWd~~~-~~~~~~~--~~h~~~V~~v~~sp--~~~~l~s~s~Dg 238 (639)
..|..|+..| +.+.+... +..-..+ ......|.+|++.| ++...+ ++..|
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~-g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLM-AARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEE-EEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEE-EecCC
Confidence 4677777777 44444322 2222211 12245699999998 444444 44444
No 391
>1df6_A Cycloviolacin O1; cyclic cystine knot, backbone cyclic, 3-10 helix, double- stranded anti- parallel beta-sheet, hairpin bends, loops; NMR {Viola odorata} SCOP: g.3.3.2
Probab=31.51 E-value=5.8 Score=21.86 Aligned_cols=7 Identities=29% Similarity=0.600 Sum_probs=5.3
Q ss_pred ccchhHH
Q psy18073 2 TCYLNSL 8 (639)
Q Consensus 2 tcy~Ns~ 8 (639)
-||+||+
T Consensus 21 VCy~ns~ 27 (30)
T 1df6_A 21 VCYNGIP 27 (30)
T ss_dssp EEESSSB
T ss_pred eEEcccc
Confidence 3898885
No 392
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.88 E-value=26 Score=19.85 Aligned_cols=13 Identities=23% Similarity=0.897 Sum_probs=10.6
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (37)
T 2elm_A 6 SGHLYYCSQCHYS 18 (37)
T ss_dssp SSCEEECSSSSCE
T ss_pred CCcCeECCCCCcc
Confidence 4567999999975
No 393
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=28.39 E-value=27 Score=19.30 Aligned_cols=13 Identities=23% Similarity=0.703 Sum_probs=10.5
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 4 ~~k~~~C~~C~k~ 16 (35)
T 1srk_A 4 GKRPFVCRICLSA 16 (35)
T ss_dssp CCSCEECSSSCCE
T ss_pred CCcCeeCCCCCcc
Confidence 5567999999875
No 394
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=28.12 E-value=2.3e+02 Score=29.24 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=39.2
Q ss_pred eeEEeeecCCCCEEEEcCC--------------eeEEEeCCCCceeeeeecC-CccEEEEEEcCCCCcEEEEE
Q psy18073 264 VISSISHQRKSKIFATCGD--------------QCQLWEHERNEPIRAFSWN-VDSLHHVQFNPIDKHILASC 321 (639)
Q Consensus 264 ~v~~~~~~~~~~~l~~~~~--------------~i~vwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~~l~s~ 321 (639)
....|.++++|.+.+..+. .+..++..+++....+.+. ...++.++|+| |++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC-CCCEEEEE
Confidence 4567889999988884331 4566677778766666543 35789999999 55555443
No 395
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=27.26 E-value=20 Score=27.57 Aligned_cols=28 Identities=18% Similarity=0.369 Sum_probs=18.3
Q ss_pred CCCeeeccccCceeeeeEEEEeccCCce
Q psy18073 586 GANQYFCDKCGKKCDAHKGLKFTEFPYL 613 (639)
Q Consensus 586 ~~~~~~c~~c~~~~~~~~~~~~~~~p~~ 613 (639)
...+|.|+.|++..-.+..+-||+.+.+
T Consensus 57 q~akytCPfCGk~~vKR~avGIW~C~~C 84 (116)
T 3cc2_Z 57 MNEDHACPNCGEDRVDRQGTGIWQCSYC 84 (116)
T ss_dssp HHSCEECSSSCCEEEEEEETTEEEETTT
T ss_pred hccCCcCCCCCCceeEecCceeEECCCC
Confidence 3456999999986444444556766654
No 396
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=27.17 E-value=21 Score=25.86 Aligned_cols=27 Identities=19% Similarity=0.426 Sum_probs=17.5
Q ss_pred CCeeeccccCceeeeeEEEEeccCCce
Q psy18073 587 ANQYFCDKCGKKCDAHKGLKFTEFPYL 613 (639)
Q Consensus 587 ~~~~~c~~c~~~~~~~~~~~~~~~p~~ 613 (639)
..+|.|+.|+....-.....|++.|..
T Consensus 25 ~~~y~Cp~CG~~~v~r~atGiW~C~~C 51 (83)
T 1vq8_Z 25 NEDHACPNCGEDRVDRQGTGIWQCSYC 51 (83)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTT
T ss_pred cccCcCCCCCCcceeccCCCeEECCCC
Confidence 346899999986444445556666654
No 397
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=26.50 E-value=26 Score=24.55 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=20.8
Q ss_pred eCCCCeeeccccCceeeeeEEEEeccCCce
Q psy18073 584 LDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613 (639)
Q Consensus 584 l~~~~~~~c~~c~~~~~~~~~~~~~~~p~~ 613 (639)
+....+|.|+.|++..--+..+-||+....
T Consensus 22 ~~q~~ky~C~fCgk~~vkR~a~GIW~C~~C 51 (73)
T 1ffk_W 22 IKHKKKYKCPVCGFPKLKRASTSIWVCGHC 51 (73)
T ss_pred HhcccCccCCCCCCceeEEEEeEEEECCCC
Confidence 344567999999987555556677776654
No 398
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=26.44 E-value=29 Score=17.57 Aligned_cols=11 Identities=18% Similarity=0.815 Sum_probs=8.8
Q ss_pred CeeeccccCce
Q psy18073 588 NQYFCDKCGKK 598 (639)
Q Consensus 588 ~~~~c~~c~~~ 598 (639)
..|.|+.|++.
T Consensus 2 k~~~C~~C~k~ 12 (27)
T 2kvh_A 2 KPFSCSLCPQR 12 (27)
T ss_dssp CCEECSSSSCE
T ss_pred cCccCCCcChh
Confidence 35899999975
No 399
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=26.17 E-value=23 Score=19.91 Aligned_cols=13 Identities=23% Similarity=0.887 Sum_probs=10.3
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 8 ~~k~~~C~~C~k~ 20 (37)
T 1p7a_A 8 GIKPFQCPDCDRS 20 (37)
T ss_dssp CSSSBCCTTTCCC
T ss_pred CCCCccCCCCCcc
Confidence 4567999999875
No 400
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=25.95 E-value=1.8e+02 Score=30.13 Aligned_cols=55 Identities=13% Similarity=0.191 Sum_probs=39.2
Q ss_pred eEEeeecCCCCEEEEcCC--------------eeEEEeCCCCceeeeeecCC-ccEEEEEEcCCCCcEEEE
Q psy18073 265 ISSISHQRKSKIFATCGD--------------QCQLWEHERNEPIRAFSWNV-DSLHHVQFNPIDKHILAS 320 (639)
Q Consensus 265 v~~~~~~~~~~~l~~~~~--------------~i~vwd~~~~~~~~~~~~h~-~~v~~v~~sp~~~~~l~s 320 (639)
.--|+|+|.|.+++..++ .+.+.+..+++..+-+.+.. ..++.++|+| |++.|..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp-Dg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP-DQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT-TSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC-CCCEEEE
Confidence 456889999998887653 24555667777777676654 5899999999 5555544
No 401
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.87 E-value=32 Score=18.86 Aligned_cols=13 Identities=46% Similarity=0.976 Sum_probs=10.4
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 4 ~~k~~~C~~C~k~ 16 (35)
T 2elx_A 4 GSSGYVCALCLKK 16 (35)
T ss_dssp CCCSEECSSSCCE
T ss_pred CCCCeECCCCcch
Confidence 4556999999875
No 402
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.42 E-value=33 Score=18.99 Aligned_cols=13 Identities=23% Similarity=0.710 Sum_probs=10.3
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (36)
T 2elt_A 6 SGKPYKCPQCSYA 18 (36)
T ss_dssp CCCSEECSSSSCE
T ss_pred CCCCCCCCCCCcc
Confidence 4567999999975
No 403
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=24.31 E-value=32 Score=17.52 Aligned_cols=11 Identities=45% Similarity=1.192 Sum_probs=8.8
Q ss_pred CeeeccccCce
Q psy18073 588 NQYFCDKCGKK 598 (639)
Q Consensus 588 ~~~~c~~c~~~ 598 (639)
..|.|+.|++.
T Consensus 2 k~~~C~~C~k~ 12 (28)
T 2kvf_A 2 RPYSCSVCGKR 12 (28)
T ss_dssp CSEECSSSCCE
T ss_pred cCccCCCCCcc
Confidence 35899999875
No 404
>1qmy_A Protease, leader protease; hydrolase, sulfhydryl proteinase, picornaviral proteinase; 1.9A {Aphthovirus O} SCOP: d.3.1.2 PDB: 1qol_A 2jqf_R 2jqg_R
Probab=23.67 E-value=12 Score=29.75 Aligned_cols=26 Identities=19% Similarity=0.571 Sum_probs=15.9
Q ss_pred CccchhHHHHHHhcCHHHHHHHhcCcccc
Q psy18073 1 MTCYLNSLIQALFMTPEFRNAVYKWKYEN 29 (639)
Q Consensus 1 ~tcy~Ns~lq~l~~~~~l~~~~~~~~~~~ 29 (639)
.+|.+|+++|.....- .-++.|.|..
T Consensus 21 dncWLNtilQLfryvd---epfFd~~y~s 46 (167)
T 1qmy_A 21 DNAWLNAILQLFRYVE---EPFFDWVYSS 46 (167)
T ss_dssp SCHHHHHHHHHHHHHT---CCTTHHHHTC
T ss_pred cchHHHHHHHHHHHcC---ccchhhccCC
Confidence 3799999999754332 2344555443
No 405
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.74 E-value=38 Score=18.94 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=10.3
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (37)
T 2elp_A 6 SGRAMKCPYCDFY 18 (37)
T ss_dssp CCCCEECSSSSCE
T ss_pred CCCCeECCCCChh
Confidence 4567999999875
No 406
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.51 E-value=38 Score=18.78 Aligned_cols=13 Identities=23% Similarity=0.723 Sum_probs=10.2
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (36)
T 2els_A 6 SGKIFTCEYCNKV 18 (36)
T ss_dssp CCCCEECTTTCCE
T ss_pred CCCCEECCCCCce
Confidence 4456999999875
No 407
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.46 E-value=39 Score=18.75 Aligned_cols=13 Identities=31% Similarity=0.667 Sum_probs=10.1
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (36)
T 2elv_A 6 SGLLYDCHICERK 18 (36)
T ss_dssp CCCCEECSSSCCE
T ss_pred CCCCeECCCCCCc
Confidence 4556999999864
No 408
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=22.05 E-value=11 Score=19.02 Aligned_cols=9 Identities=44% Similarity=1.512 Sum_probs=6.9
Q ss_pred eeccccCce
Q psy18073 590 YFCDKCGKK 598 (639)
Q Consensus 590 ~~c~~c~~~ 598 (639)
++|+.|.+.
T Consensus 6 ffcetcskp 14 (26)
T 1loi_A 6 FFCETCSKP 14 (26)
T ss_dssp HHHHTSSCT
T ss_pred HHHHhcCCc
Confidence 689999764
No 409
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=21.63 E-value=34 Score=28.43 Aligned_cols=24 Identities=33% Similarity=0.826 Sum_probs=15.3
Q ss_pred hhcCceeeCCCC-----eeeccccCceee
Q psy18073 577 AFVRPETLDGAN-----QYFCDKCGKKCD 600 (639)
Q Consensus 577 ~~~~~e~l~~~~-----~~~c~~c~~~~~ 600 (639)
+..+.-.+.|.+ -|.|++|++.++
T Consensus 137 eHlK~~~~~GqDyvFWQFYKCe~CgKYvD 165 (226)
T 2czr_A 137 NHIKNNALAGQDYIFWQFYKCEECGKYVD 165 (226)
T ss_dssp HHHHTTCCBTTTEEEEEEEECTTTCCEEE
T ss_pred HHHHhccccCcceEEEEEEehhhcCceec
Confidence 333345555654 378999998854
No 410
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.59 E-value=41 Score=18.64 Aligned_cols=13 Identities=15% Similarity=0.549 Sum_probs=10.5
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~k~~~C~~C~k~ 18 (36)
T 2elq_A 6 SGKPFKCSLCEYA 18 (36)
T ss_dssp CCCSEECSSSSCE
T ss_pred CCCCccCCCCCch
Confidence 4567999999875
No 411
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=21.56 E-value=45 Score=28.38 Aligned_cols=14 Identities=29% Similarity=0.752 Sum_probs=11.2
Q ss_pred CCCeeeccccCcee
Q psy18073 586 GANQYFCDKCGKKC 599 (639)
Q Consensus 586 ~~~~~~c~~c~~~~ 599 (639)
+++.|+|++|++..
T Consensus 59 ~~g~~~CekC~~~~ 72 (181)
T 1l1o_C 59 QNGLYRCEKCDTEF 72 (181)
T ss_dssp TTTEEEETTTTEEE
T ss_pred CCCeEECCCCCCcC
Confidence 45689999998763
No 412
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.19 E-value=35 Score=18.89 Aligned_cols=13 Identities=46% Similarity=1.045 Sum_probs=10.3
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 6 ~~~~~~C~~C~k~ 18 (36)
T 2elr_A 6 SGKTHLCDMCGKK 18 (36)
T ss_dssp CCSSCBCTTTCCB
T ss_pred CCCCeecCcCCCC
Confidence 4567999999975
No 413
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=21.16 E-value=28 Score=17.76 Aligned_cols=10 Identities=30% Similarity=0.737 Sum_probs=8.2
Q ss_pred eeeccccCce
Q psy18073 589 QYFCDKCGKK 598 (639)
Q Consensus 589 ~~~c~~c~~~ 598 (639)
.|.|+.|++.
T Consensus 3 ~~~C~~C~k~ 12 (27)
T 2kvg_A 3 PYRCPLCRAG 12 (27)
T ss_dssp TEEETTTTEE
T ss_pred CcCCCCCCcc
Confidence 5899999875
No 414
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=21.14 E-value=38 Score=17.42 Aligned_cols=11 Identities=45% Similarity=1.235 Sum_probs=8.8
Q ss_pred CeeeccccCce
Q psy18073 588 NQYFCDKCGKK 598 (639)
Q Consensus 588 ~~~~c~~c~~~ 598 (639)
..|.|+.|++.
T Consensus 2 k~~~C~~C~~~ 12 (30)
T 2m0d_A 2 KPYQCDYCGRS 12 (30)
T ss_dssp CCEECTTTCCE
T ss_pred cCccCCCCCcc
Confidence 35899999975
No 415
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=20.79 E-value=41 Score=19.20 Aligned_cols=13 Identities=23% Similarity=0.713 Sum_probs=10.2
Q ss_pred CCCeeeccccCce
Q psy18073 586 GANQYFCDKCGKK 598 (639)
Q Consensus 586 ~~~~~~c~~c~~~ 598 (639)
++..|.|+.|++.
T Consensus 3 ~~k~~~C~~C~k~ 15 (39)
T 1njq_A 3 PPRSYTCSFCKRE 15 (39)
T ss_dssp CSSSEECTTTCCE
T ss_pred CCCceECCCCCcc
Confidence 4556999999875
No 416
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=20.51 E-value=8e+02 Score=26.21 Aligned_cols=55 Identities=20% Similarity=0.176 Sum_probs=36.1
Q ss_pred cccccEEEEEECCCCCeeEEEeeCCCcEEEEeCCCCceEEEEec------------cCCceEEEEEcC
Q psy18073 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA------------HDGHVRDVCFLP 226 (639)
Q Consensus 171 ~H~~~V~~l~~sp~~~~~l~sgs~dg~i~vWd~~~~~~~~~~~~------------h~~~V~~v~~sp 226 (639)
|-.+.|.+|+++|.++..+..+...|.|...+ +.|+.-..+.. ....|.+|++.|
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp 84 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDP 84 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCT
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECC
Confidence 34568999999998877777777667665554 33443332221 123589999988
Done!