Your job contains 1 sequence.
>psy18073
MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD
LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEY
LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLA
KHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTI
KTWSSELSESDHIVPLHTIISKSVISSISHQRKSKIFATCGDQCQLWEHERNEPIRAFSW
NVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKTSIHRIPRNID
PSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHK
DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDL
TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCL
ECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCD
AHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVEC
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18073
(639 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6NVS5 - symbol:dcaf13 "DDB1- and CUL4-associat... 713 2.1e-70 1
FB|FBgn0036500 - symbol:CG7275 species:7227 "Drosophila m... 685 9.8e-70 2
UNIPROTKB|Q9NV06 - symbol:DCAF13 "DDB1- and CUL4-associat... 705 1.4e-69 1
FB|FBgn0016756 - symbol:Ubp64E "Ubiquitin-specific protea... 716 1.7e-69 1
UNIPROTKB|Q7ZYQ6 - symbol:dcaf13 "DDB1- and CUL4-associat... 704 1.8e-69 1
UNIPROTKB|Q5R4T8 - symbol:DCAF13 "DDB1- and CUL4-associat... 700 4.9e-69 1
UNIPROTKB|F1S1E1 - symbol:DCAF13 "Uncharacterized protein... 700 4.9e-69 1
UNIPROTKB|F1P9T8 - symbol:DCAF13 "Uncharacterized protein... 696 1.3e-68 1
RGD|1308458 - symbol:Dcaf13 "DDB1 and CUL4 associated fac... 692 3.5e-68 1
UNIPROTKB|F1MVI8 - symbol:F1MVI8 "Uncharacterized protein... 690 5.6e-68 1
MGI|MGI:2684929 - symbol:Dcaf13 "DDB1 and CUL4 associated... 687 1.2e-67 1
UNIPROTKB|Q5ZLK1 - symbol:DCAF13 "DDB1- and CUL4-associat... 683 3.1e-67 1
ZFIN|ZDB-GENE-040426-703 - symbol:dcaf13 "ddb1 and cul4 a... 670 7.4e-66 1
UNIPROTKB|A1A5G2 - symbol:usp47 "Ubiquitin carboxyl-termi... 656 4.3e-64 2
UNIPROTKB|Q5U252 - symbol:usp47 "Ubiquitin carboxyl-termi... 652 1.1e-63 2
UNIPROTKB|F1PZF8 - symbol:USP47 "Ubiquitin carboxyl-termi... 639 2.3e-62 2
UNIPROTKB|E9PM46 - symbol:USP47 "Ubiquitin carboxyl-termi... 639 2.3e-62 2
RGD|1310411 - symbol:Usp47 "ubiquitin specific peptidase ... 639 2.3e-62 2
UNIPROTKB|E9PT09 - symbol:Usp47 "Ubiquitin carboxyl-termi... 639 2.3e-62 2
UNIPROTKB|F1LYA3 - symbol:Usp47 "Ubiquitin carboxyl-termi... 639 2.4e-62 2
UNIPROTKB|F1N1Z2 - symbol:USP47 "Ubiquitin carboxyl-termi... 639 2.5e-62 2
UNIPROTKB|Q96K76 - symbol:USP47 "Ubiquitin carboxyl-termi... 639 2.5e-62 2
MGI|MGI:1922246 - symbol:Usp47 "ubiquitin specific peptid... 639 3.2e-62 2
UNIPROTKB|E1C1R4 - symbol:USP47 "Ubiquitin carboxyl-termi... 636 5.3e-62 2
DICTYBASE|DDB_G0276815 - symbol:DDB_G0276815 "WD repeat-c... 560 4.2e-57 2
WB|WBGene00011507 - symbol:T05H10.1 species:6239 "Caenorh... 547 1.4e-51 1
WB|WBGene00022742 - symbol:ZK430.7 species:6239 "Caenorha... 510 6.7e-49 1
TAIR|locus:2121328 - symbol:AT4G28450 "AT4G28450" species... 496 2.0e-47 1
UNIPROTKB|F1S6W7 - symbol:USP47 "Uncharacterized protein"... 451 2.7e-40 1
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 309 2.1e-38 3
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 309 2.1e-38 3
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 404 2.7e-37 1
ZFIN|ZDB-GENE-070719-7 - symbol:usp47 "ubiquitin specific... 395 2.8e-36 1
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 360 7.6e-35 2
UNIPROTKB|I3LAJ2 - symbol:I3LAJ2 "Uncharacterized protein... 368 2.9e-33 1
DICTYBASE|DDB_G0289611 - symbol:usp40 "putative ubiquitin... 308 2.3e-28 2
POMBASE|SPBC713.02c - symbol:ubp15 "ubiquitin C-terminal ... 312 2.8e-24 1
GENEDB_PFALCIPARUM|PFD0455w - symbol:PFD0455w "ribosomal ... 272 3.5e-24 2
UNIPROTKB|Q9U0J4 - symbol:PFD0455w "40S ribosomal process... 272 3.5e-24 2
FB|FBgn0030366 - symbol:Usp7 "Ubiquitin-specific protease... 311 3.6e-24 1
DICTYBASE|DDB_G0276443 - symbol:usp7 "putative ubiquitin ... 307 1.2e-23 1
CGD|CAL0000934 - symbol:orf19.1777 species:5476 "Candida ... 307 1.3e-23 1
UNIPROTKB|F5H2X1 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 2.3e-23 1
UNIPROTKB|Q60MK8 - symbol:usp-7 "Ubiquitin carboxyl-termi... 301 4.4e-23 1
ZFIN|ZDB-GENE-030131-3656 - symbol:usp7 "ubiquitin specif... 300 5.6e-23 1
SGD|S000004920 - symbol:UBP15 "Ubiquitin-specific proteas... 300 6.5e-23 1
POMBASE|SPCC188.08c - symbol:ubp5 "ubiquitin C-terminal h... 299 7.1e-23 1
UNIPROTKB|H3BND8 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.1e-22 1
UNIPROTKB|F5H8E5 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.3e-22 1
UNIPROTKB|F1N556 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
UNIPROTKB|F1PX83 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
UNIPROTKB|B7Z815 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
UNIPROTKB|Q93009 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
UNIPROTKB|F1RKZ6 - symbol:USP7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
RGD|1306915 - symbol:Usp7 "ubiquitin specific peptidase 7... 296 1.5e-22 1
UNIPROTKB|Q4VSI4 - symbol:Usp7 "Ubiquitin carboxyl-termin... 296 1.5e-22 1
SGD|S000003934 - symbol:SOF1 "Essential protein required ... 286 2.6e-22 1
MGI|MGI:2182061 - symbol:Usp7 "ubiquitin specific peptida... 293 3.2e-22 1
UNIPROTKB|F1P4V7 - symbol:USP7 "Ubiquitin carboxyl-termin... 288 3.4e-22 1
UNIPROTKB|F1P4U6 - symbol:USP7 "Ubiquitin carboxyl-termin... 288 4.3e-22 1
UNIPROTKB|E1BRT3 - symbol:USP40 "Ubiquitin carboxyl-termi... 289 1.1e-21 1
UNIPROTKB|F1P4U4 - symbol:USP7 "Ubiquitin carboxyl-termin... 288 1.1e-21 1
UNIPROTKB|F1N909 - symbol:USP7 "Ubiquitin carboxyl-termin... 288 1.1e-21 1
UNIPROTKB|Q6U7I1 - symbol:USP7 "Ubiquitin carboxyl-termin... 288 1.1e-21 1
WB|WBGene00010406 - symbol:math-33 species:6239 "Caenorha... 291 6.8e-21 2
UNIPROTKB|Q7JKC3 - symbol:usp-7 "Ubiquitin carboxyl-termi... 291 6.8e-21 2
UNIPROTKB|D4A2R6 - symbol:Usp40 "Ubiquitin carboxyl-termi... 272 1.1e-20 1
TAIR|locus:2144118 - symbol:UBP12 "ubiquitin-specific pro... 277 1.8e-20 1
UNIPROTKB|E1BKD2 - symbol:USP40 "Ubiquitin carboxyl-termi... 275 3.5e-20 1
TAIR|locus:2081501 - symbol:UBP13 "ubiquitin-specific pro... 270 1.1e-19 1
UNIPROTKB|Q9NVE5 - symbol:USP40 "Ubiquitin carboxyl-termi... 265 4.3e-19 1
MGI|MGI:2443184 - symbol:Usp40 "ubiquitin specific peptid... 265 4.3e-19 1
GENEDB_PFALCIPARUM|MAL7P1.147 - symbol:MAL7P1.147 "ubiqui... 261 5.5e-19 2
UNIPROTKB|Q8IBJ1 - symbol:MAL7P1.147 "Ubiquitin carboxyl-... 261 5.5e-19 2
ZFIN|ZDB-GENE-060518-5 - symbol:usp40 "ubiquitin specific... 258 2.6e-18 1
UNIPROTKB|E1C6Z2 - symbol:USP35 "Ubiquitin carboxyl-termi... 134 3.4e-15 3
UNIPROTKB|Q9UMW8 - symbol:USP18 "Ubl carboxyl-terminal hy... 180 5.4e-15 2
UNIPROTKB|E9PK78 - symbol:USP35 "Ubiquitin carboxyl-termi... 135 5.9e-15 3
UNIPROTKB|F1PCW1 - symbol:USP35 "Ubiquitin carboxyl-termi... 133 6.2e-15 3
UNIPROTKB|J9P005 - symbol:USP35 "Ubiquitin carboxyl-termi... 133 7.2e-15 3
RGD|1565984 - symbol:Usp35 "ubiquitin specific peptidase ... 131 1.1e-14 3
UNIPROTKB|H7BXK0 - symbol:USP41 "Putative ubiquitin carbo... 173 1.2e-14 2
UNIPROTKB|E1BG52 - symbol:USP35 "Ubiquitin carboxyl-termi... 128 2.1e-14 3
SGD|S000000900 - symbol:UBP9 "Ubiquitin-specific protease... 192 2.1e-14 2
MGI|MGI:1922091 - symbol:Usp38 "ubiquitin specific peptid... 135 2.6e-14 3
UNIPROTKB|Q3LFD5 - symbol:USP41 "Putative ubiquitin carbo... 173 3.6e-14 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 179 4.1e-14 2
DICTYBASE|DDB_G0274795 - symbol:DDB_G0274795 "ubiquitin-s... 179 4.4e-14 2
UNIPROTKB|Q9P2H5 - symbol:USP35 "Ubiquitin carboxyl-termi... 135 4.8e-14 3
UNIPROTKB|F1PZM9 - symbol:USP18 "Uncharacterized protein"... 207 5.2e-14 1
RGD|1308045 - symbol:Usp12 "ubiquitin specific peptidase ... 175 6.4e-14 2
WB|WBGene00011216 - symbol:usp-46 species:6239 "Caenorhab... 177 7.8e-14 2
UNIPROTKB|F1LSW9 - symbol:RGD1561481 "Ubiquitin carboxyl-... 173 9.4e-14 2
UNIPROTKB|A5D9H7 - symbol:USP12 "Ubiquitin carboxyl-termi... 175 1.0e-13 2
UNIPROTKB|O75317 - symbol:USP12 "Ubiquitin carboxyl-termi... 175 1.0e-13 2
UNIPROTKB|F1RTK0 - symbol:USP12 "Ubiquitin carboxyl-termi... 175 1.1e-13 2
UNIPROTKB|Q52KZ6 - symbol:usp12-a "Ubiquitin carboxyl-ter... 175 1.3e-13 2
UNIPROTKB|Q5M981 - symbol:usp12-b "Ubiquitin carboxyl-ter... 175 1.3e-13 2
UNIPROTKB|F1P2L3 - symbol:USP12 "Ubiquitin carboxyl-termi... 175 1.4e-13 2
UNIPROTKB|F1NVC5 - symbol:USP12P1 "Ubiquitin carboxyl-ter... 173 1.5e-13 2
WARNING: Descriptions of 893 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q6NVS5 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 CTD:25879 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF InterPro:IPR007287
Pfam:PF04158 EMBL:CR855579 EMBL:BC067929 RefSeq:NP_998858.1
UniGene:Str.7604 ProteinModelPortal:Q6NVS5 STRING:Q6NVS5
GeneID:407967 KEGG:xtr:407967 Xenbase:XB-GENE-5791289
InParanoid:Q6NVS5 Uniprot:Q6NVS5
Length = 445
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 124/224 (55%), Positives = 163/224 (72%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RETK + R+PRN DP+LHPFE PREY RALNATKLERVFAKPF+A+LD
Sbjct: 4 KVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR +C G+
Sbjct: 64 GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K WS E + + P+ T H IFATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWSMESPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+R+ P+R+++W VDS+ ++FNPI+ HIL+SC +DRSI+LYD R
Sbjct: 184 QRSAPMRSYAWGVDSISSIKFNPIETHILSSCGTDRSIVLYDKR 227
Score = 336 (123.3 bits), Expect = 9.4e-30, P = 9.4e-30
Identities = 80/184 (43%), Positives = 108/184 (58%)
Query: 369 PREYVRALNATKLERV------FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDG 422
P +YVR L+RV PF PREY RALNATKLERVFAKPF+A+LDGH+DG
Sbjct: 10 PDDYVRETKRD-LQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIASLDGHRDG 68
Query: 423 ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR---PAVETT- 478
++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR R + T
Sbjct: 69 VNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVG 128
Query: 479 -DLT-RSFGWESSDAWQQHD-IQELC-RVLFDALETQFKGS--KTTGDQADLINNLYQGK 532
D T + + ES ++ + I+ + + +F ++ + T G Q D+ +
Sbjct: 129 DDKTVKQWSMESPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVDIWDEQRSAP 188
Query: 533 MRDY 536
MR Y
Sbjct: 189 MRSY 192
Score = 235 (87.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
+ VL RNPD+Y+RETK + R+PRN DP+LHPFE PREY RALNATKLERVFAKPF+
Sbjct: 2 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFI 59
Score = 40 (19.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 565 SVAYGDIIEAMRAFVRPETLDGANQYFCDK----CGKKCD 600
S YG+ +E +R + G + + D CG++ D
Sbjct: 140 SPGYGEKVEPIRTILGKTVFTGIDHHMNDAIFATCGQQVD 179
>FB|FBgn0036500 [details] [associations]
symbol:CG7275 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006911 EMBL:AE014296 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00390000005711
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AY058590
RefSeq:NP_648767.1 UniGene:Dm.4153 SMR:Q9VUN7 STRING:Q9VUN7
EnsemblMetazoa:FBtr0075547 GeneID:39669 KEGG:dme:Dmel_CG7275
UCSC:CG7275-RA FlyBase:FBgn0036500 InParanoid:Q9VUN7
OrthoDB:EOG49S4NW GenomeRNAi:39669 NextBio:814787 Uniprot:Q9VUN7
Length = 446
Score = 685 (246.2 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 118/224 (52%), Positives = 158/224 (70%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+++SRNPD Y+RETK H++PRN DPSLHP EGPREYVRALNATKL+RVFAKPFV NL
Sbjct: 4 KMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLS 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG+SC KHP +LST+ +GAYDGEV++W+L ++ + + AHDG VR + + +G +
Sbjct: 64 GHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGR 123
Query: 231 FLSVGIDNTIKTWSSELSE-SDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
+VG D TIK W +E E + VP++T H R+ FATCG+ C +W+
Sbjct: 124 IFTVGDDKTIKVWKAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCAIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
N+P++ W VD+LH + +NP++ ILA CASDRSIILYD R
Sbjct: 184 RHNDPLKTLKWGVDTLHTISYNPVETSILACCASDRSIILYDQR 227
Score = 304 (112.1 bits), Expect = 9.6e-25, P = 9.6e-25
Identities = 59/104 (56%), Positives = 74/104 (71%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L K+ R + P GPREYVRALNATKL+RVFAKPFV NL GH+DG+
Sbjct: 10 PDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFVCNLSGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
SC KHP +LST+ +GAYDGEV++W+L ++ + + AHDG VR
Sbjct: 70 SCFGKHPKQLSTLATGAYDGEVRIWDLANRISSRNFVAHDGFVR 113
Score = 239 (89.2 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 43/58 (74%), Positives = 50/58 (86%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
+ ++SRNPD Y+RETK H++PRN DPSLHP EGPREYVRALNATKL+RVFAKPFV
Sbjct: 2 KVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKLDRVFAKPFV 59
Score = 40 (19.1 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 15/63 (23%), Positives = 25/63 (39%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH 465
R P + D H ++ + PT +S +YD ++++N AH H
Sbjct: 269 RKLQTPLKVHFD-HVSAVTDVDYSPTG-KEFVSASYDKTIRIYN-----------AHHSH 315
Query: 466 VRD 468
RD
Sbjct: 316 SRD 318
>UNIPROTKB|Q9NV06 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AF161549 EMBL:AK001874
EMBL:AK027799 EMBL:AK074725 EMBL:BC026067 EMBL:BC101810
EMBL:BC112042 IPI:IPI00306642 IPI:IPI00747916 RefSeq:NP_056235.4
UniGene:Hs.532265 ProteinModelPortal:Q9NV06 SMR:Q9NV06
STRING:Q9NV06 PhosphoSite:Q9NV06 DMDM:160358731 PaxDb:Q9NV06
PeptideAtlas:Q9NV06 PRIDE:Q9NV06 Ensembl:ENST00000297579
GeneID:25879 KEGG:hsa:25879 UCSC:uc003ylm.1 GeneCards:GC08P104426
H-InvDB:HIX0201273 HGNC:HGNC:24535 neXtProt:NX_Q9NV06
PharmGKB:PA165585440 InParanoid:Q9NV06 ChiTaRS:DCAF13
GenomeRNAi:25879 NextBio:47292 ArrayExpress:Q9NV06 Bgee:Q9NV06
CleanEx:HS_WDSOF1 Genevestigator:Q9NV06 Uniprot:Q9NV06
Length = 445
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 126/231 (54%), Positives = 166/231 (71%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREY+RALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP KL+T++SGA DGEV++WNLT ++C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + D PLHT H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R PI + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 345 (126.5 bits), Expect = 9.8e-31, P = 9.8e-31
Identities = 65/109 (59%), Positives = 85/109 (77%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREY+RALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP KL+T++SGA DGEV++WNLT ++C++T QAH+G VR TR
Sbjct: 70 NCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTR 118
Score = 237 (88.5 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PREY+RALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>FB|FBgn0016756 [details] [associations]
symbol:Ubp64E "Ubiquitin-specific protease 64E" species:7227
"Drosophila melanogaster" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006508 "proteolysis" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IDA] [GO:0016579
"protein deubiquitination" evidence=IDA] [GO:0042675 "compound eye
cone cell differentiation" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031935 "regulation of chromatin
silencing" evidence=IMP] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005634 EMBL:AE014296 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5077 GeneTree:ENSGT00630000089581 KO:K11857
EMBL:BT003784 EMBL:X99211 EMBL:AY058672 RefSeq:NP_523937.2
RefSeq:NP_729087.1 RefSeq:NP_996001.2 UniGene:Dm.3704
ProteinModelPortal:Q24574 SMR:Q24574 IntAct:Q24574 MINT:MINT-971166
STRING:Q24574 MEROPS:C19.A50 PaxDb:Q24574
EnsemblMetazoa:FBtr0077095 EnsemblMetazoa:FBtr0077096 GeneID:38644
KEGG:dme:Dmel_CG5486 CTD:38644 FlyBase:FBgn0016756
InParanoid:Q24574 OMA:CLECNTE OrthoDB:EOG4X69Q3 PhylomeDB:Q24574
ChiTaRS:Ubp64E GenomeRNAi:38644 NextBio:809673 Bgee:Q24574
GermOnline:CG5486 GO:GO:0031935 Uniprot:Q24574
Length = 1556
Score = 716 (257.1 bits), Expect = 1.7e-69, P = 1.7e-69
Identities = 132/169 (78%), Positives = 148/169 (87%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + AVETTDLTRSFGW+S++AWQQHDIQELCRV+FDALE +FK +K QA+LI+NL
Sbjct: 451 TSPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTK----QANLISNL 506
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
Y+GKM DYVKCLEC TEK+REDTFLDIPLPVRPFGSS AYG I EA+RAFV+PETLDG N
Sbjct: 507 YEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNN 566
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QY C+KC KKCDAHKGL F FPY+LTLHL RFDFDY TMHRIKLND+V
Sbjct: 567 QYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRV 615
Score = 428 (155.7 bits), Expect = 4.5e-37, P = 4.5e-37
Identities = 96/176 (54%), Positives = 121/176 (68%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD 60
MTCYLNSL+QALFMTPEFRNA+Y+W+++ND E +I YQLQKLF+NLQTS + AVETTD
Sbjct: 403 MTCYLNSLLQALFMTPEFRNALYRWEFDND-NEAKNIPYQLQKLFLNLQTSPKAAVETTD 461
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEY 120
LTRSFGW+S++AWQQHDIQELCRV+FDALE +FK +K QA+LI+NLY+ ++Y
Sbjct: 462 LTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTK----QANLISNLYE---GKMNDY 514
Query: 121 LR--ETKTSIHRIPRNIDPSL--HPFEGPREYVRALNATKLERVFAKPFVANLDGH 172
++ E T R +D L PF Y A R F +P LDG+
Sbjct: 515 VKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEAL---RAFVQP--ETLDGN 565
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 122/224 (54%), Positives = 163/224 (72%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RETK + R+PRN DP+LHPFE REY RALNATKLERVFAKPF+A+LD
Sbjct: 4 KVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR +C G+
Sbjct: 64 GHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W+ E + + P+ T H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+R+ P+R+++W VDS+ V+FNP++ HIL+SC +DRSI+LYD R
Sbjct: 184 QRSAPMRSYAWGVDSISSVRFNPVETHILSSCGTDRSIVLYDKR 227
Score = 332 (121.9 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 80/184 (43%), Positives = 106/184 (57%)
Query: 369 PREYVRALNATKLERV------FAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDG 422
P +YVR L+RV PF REY RALNATKLERVFAKPF+A+LDGH+DG
Sbjct: 10 PDDYVRETKRD-LQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIASLDGHRDG 68
Query: 423 ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR---PAVETT- 478
++C+AKHP LST++SGA DGEVK+WNLT + C +T QAHDG VR R + T
Sbjct: 69 VNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFCGTSFFTVG 128
Query: 479 -DLT-RSFGWESSDAWQQHDIQE--LCRVLFDALETQFKGS--KTTGDQADLINNLYQGK 532
D T + + ES ++ + L + +F ++ K + T G Q D+ +
Sbjct: 129 DDKTVKQWAMESPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVDIWDEQRSAP 188
Query: 533 MRDY 536
MR Y
Sbjct: 189 MRSY 192
Score = 227 (85.0 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 41/58 (70%), Positives = 48/58 (82%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
+ VL RNPD+Y+RETK + R+PRN DP+LHPFE REY RALNATKLERVFAKPF+
Sbjct: 2 KVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFI 59
Score = 43 (20.2 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 565 SVAYGDIIEAMRAFVRPETLDGANQYFCDK----CGKKCD 600
S YG+ +E MR + G + + D CG++ D
Sbjct: 140 SPGYGEKVEPMRTILGKTVFTGIDHHVKDAVFATCGQQVD 179
>UNIPROTKB|Q5R4T8 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:CR861153 RefSeq:NP_001126898.1 UniGene:Pab.18251
ProteinModelPortal:Q5R4T8 GeneID:100173913 KEGG:pon:100173913
InParanoid:Q5R4T8 Uniprot:Q5R4T8
Length = 445
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 125/231 (54%), Positives = 165/231 (71%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L+T++SGA DGEV++WNLT ++C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + D PLHT H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R P+ + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 341 (125.1 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/109 (59%), Positives = 84/109 (77%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREYVRALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP L+T++SGA DGEV++WNLT ++C++T QAH+G VR TR
Sbjct: 70 NCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTR 118
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>UNIPROTKB|F1S1E1 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:CU469011
Ensembl:ENSSSCT00000006637 Uniprot:F1S1E1
Length = 445
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 127/231 (54%), Positives = 165/231 (71%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L+T++SGA DGEV++WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + S + PLHT H K IFATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPSYGEDEEPLHTILGKTVYTGIDHHWKEAIFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R PI + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 340 (124.7 bits), Expect = 3.5e-30, P = 3.5e-30
Identities = 65/109 (59%), Positives = 83/109 (76%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREYVRALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP L+T++SGA DGEV++WNLT + C++T QAH+G VR TR
Sbjct: 70 NCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTR 118
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYVRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>UNIPROTKB|F1P9T8 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 EMBL:AAEX03008708
RefSeq:XP_532299.2 Ensembl:ENSCAFT00000001031 GeneID:475065
KEGG:cfa:475065 Uniprot:F1P9T8
Length = 445
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 125/231 (54%), Positives = 164/231 (70%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L+T++SGA DGEV++WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + + PLHT H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R PI + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 340 (124.7 bits), Expect = 3.5e-30, P = 3.5e-30
Identities = 65/109 (59%), Positives = 83/109 (76%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREYVRALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP L+T++SGA DGEV++WNLT + C++T QAH+G VR TR
Sbjct: 70 NCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTR 118
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>RGD|1308458 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13" species:10116
"Rattus norvegicus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308458 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 InterPro:IPR007287
Pfam:PF04158 IPI:IPI00393552 RefSeq:NP_001167029.1 UniGene:Rn.41457
ProteinModelPortal:F1M7P1 Ensembl:ENSRNOT00000005803 GeneID:362902
KEGG:rno:362902 UCSC:RGD:1308458 NextBio:681728 ArrayExpress:F1M7P1
Uniprot:F1M7P1
Length = 445
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 126/233 (54%), Positives = 165/233 (70%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK I R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L+T++SGA DGEVK+WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE---LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLW 287
F +VG D T+K W + E + PL+T H K FATCG Q +W
Sbjct: 124 FFTVGDDKTVKQWKMDGPGCGEEEE--PLYTVLGKTVYTGIDHHWKDPAFATCGQQVDIW 181
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+ +R P+ + +W DS+ V+FNPI+ ++L SCASDR+I+LYD R AT L +
Sbjct: 182 DEQRTSPVCSMNWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQATPLKK 234
Score = 343 (125.8 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 66/109 (60%), Positives = 83/109 (76%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREYVRALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP L+T++SGA DGEVK+WNLT + C++T QAH+G VR TR
Sbjct: 70 NCLAKHPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTR 118
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/71 (67%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK I R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>UNIPROTKB|F1MVI8 [details] [associations]
symbol:F1MVI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
EMBL:DAAA02039320 EMBL:DAAA02039321 EMBL:DAAA02039322
IPI:IPI00686597 Ensembl:ENSBTAT00000028594 OMA:ECESHHI
Uniprot:F1MVI8
Length = 449
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 124/231 (53%), Positives = 165/231 (71%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK + R+PRN DP+LHPFE PREY+RALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDHYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAK+P L+T++SGA DGEVK+WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKNPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + S + PLHT H + +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPSCGEEEEPLHTILGKTVYTGIDHHWREAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R PI + +W DS+ V+FNPI+ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 335 (123.0 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 64/109 (58%), Positives = 83/109 (76%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREY+RALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDHYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAK+P L+T++SGA DGEVK+WNLT + C++T QAH+G VR TR
Sbjct: 70 NCLAKNPKSLATVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGICTR 118
Score = 237 (88.5 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK + R+PRN DP+LHPFE PREY+RALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDHYVRETKLDLQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>MGI|MGI:2684929 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:2684929 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 EMBL:AC164883 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OMA:CASDRSI OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AC165352 EMBL:BC060375
IPI:IPI00129701 RefSeq:NP_941008.2 UniGene:Mm.321937
ProteinModelPortal:Q6PAC3 SMR:Q6PAC3 STRING:Q6PAC3
PhosphoSite:Q6PAC3 PaxDb:Q6PAC3 PRIDE:Q6PAC3
Ensembl:ENSMUST00000022909 GeneID:223499 KEGG:mmu:223499
UCSC:uc007voc.2 InParanoid:Q6PAC3 NextBio:376735 Bgee:Q6PAC3
CleanEx:MM_WDSOF1 Genevestigator:Q6PAC3 Uniprot:Q6PAC3
Length = 445
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 123/231 (53%), Positives = 164/231 (70%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++LSRNPD Y+RETK I R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+A+LD
Sbjct: 4 KMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++CLAKHP L++++SGA DGEVK+WNLT + C++T QAH+G VR +C G+
Sbjct: 64 GHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSE-LSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W + + PL+T H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R P+ + +W DS+ V+FNP++ +L SCASDR+I+LYD R AT L +
Sbjct: 184 QRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKK 234
Score = 339 (124.4 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 65/109 (59%), Positives = 83/109 (76%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P YVR L+ ++ R + PF PREYVRALNATKLERVFAKPF+A+LDGH+DG+
Sbjct: 10 PDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLASLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+CLAKHP L++++SGA DGEVK+WNLT + C++T QAH+G VR TR
Sbjct: 70 NCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTR 118
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/71 (67%), Positives = 55/71 (77%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ +LSRNPD Y+RETK I R+PRN DP+LHPFE PREYVRALNATKLERVFAKPF+
Sbjct: 2 KVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLAS 61
Query: 391 --GPREYVRAL 399
G R+ V L
Sbjct: 62 LDGHRDGVNCL 72
>UNIPROTKB|Q5ZLK1 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008
EMBL:AJ719733 IPI:IPI00588762 RefSeq:NP_001026119.1
UniGene:Gga.15424 ProteinModelPortal:Q5ZLK1 STRING:Q5ZLK1
Ensembl:ENSGALT00000025898 GeneID:420263 KEGG:gga:420263 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 InParanoid:Q5ZLK1 KO:K11806 OMA:CASDRSI
OrthoDB:EOG4T4CVF NextBio:20823203 InterPro:IPR007287 Pfam:PF04158
Uniprot:Q5ZLK1
Length = 445
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 121/231 (52%), Positives = 164/231 (70%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VLSRNPD+Y+RETK + R+PRN DP+LHPFE REYVRALNATKLERVFAKPF+++LD
Sbjct: 4 KVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLSSLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG++C+AKHP LST++SGA DGEV++WNLT + C++ QAH+G VR +C G+
Sbjct: 64 GHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D T+K W E + P+HT H K +FATCG Q +W+
Sbjct: 124 FFTVGDDKTVKQWKMESPGYGEEEEPIHTILGKTVYTGIDHHWKDAVFATCGQQVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR-ATVLSR 339
+R P+ + +W DS+ V+FNPI+ ++L SCASDR+I+LYD R +T L +
Sbjct: 184 QRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKK 234
Score = 322 (118.4 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 61/109 (55%), Positives = 81/109 (74%)
Query: 369 PREYVRA--LNATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P +YVR L+ ++ R + PF REYVRALNATKLERVFAKPF+++LDGH+DG+
Sbjct: 10 PDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLSSLDGHRDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
+C+AKHP LST++SGA DGEV++WNLT + C++ QAH+G VR R
Sbjct: 70 NCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCAR 118
Score = 237 (88.5 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
R VLSRNPD+Y+RETK + R+PRN DP+LHPFE REYVRALNATKLERVFAKPF+
Sbjct: 2 RVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFL 59
>ZFIN|ZDB-GENE-040426-703 [details] [associations]
symbol:dcaf13 "ddb1 and cul4 associated factor 13"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
ZFIN:ZDB-GENE-040426-703 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:BC044155 IPI:IPI00618021
RefSeq:NP_956423.1 UniGene:Dr.79195 ProteinModelPortal:Q803X4
STRING:Q803X4 GeneID:393097 KEGG:dre:393097 InParanoid:Q803X4
NextBio:20814171 ArrayExpress:Q803X4 Uniprot:Q803X4
Length = 445
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 126/237 (53%), Positives = 159/237 (67%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+VL RNPD+Y+RET I R+PRN DP+LHPFE PREY RALNATKLERVFAKPFVA+LD
Sbjct: 4 KVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ISC+ KH LST+ISGA DGEVKVWNL + C +T QAH+G VR +C G+
Sbjct: 64 GHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFCGTS 123
Query: 231 FLSVGIDNTIKTWSSEL-SESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F +VG D TIK W+ E P++T H ++ F TCG +W+
Sbjct: 124 FFTVGDDKTIKQWNMEAPGYGVREEPINTILGKAVFTGIDHHQREGTFVTCGQTVDIWDE 183
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLR 346
+R+ P+ +FSW VDS V++NP++ +LASCASDRSI+LYDTR + R LR
Sbjct: 184 QRSSPVLSFSWGVDSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLRKVIMQLR 240
Score = 313 (115.2 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 64/109 (58%), Positives = 77/109 (70%)
Query: 369 PREYVRAL--NATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P +YVR + ++ R + PF PREY RALNATKLERVFAKPFVA+LDGH+D I
Sbjct: 10 PDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVASLDGHRDVI 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTR 472
SC+ KH LST+ISGA DGEVKVWNL + C +T QAH+G VR +R
Sbjct: 70 SCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSR 118
Score = 239 (89.2 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 59/127 (46%), Positives = 75/127 (59%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV-- 390
+ VL RNPD+Y+RET I R+PRN DP+LHPFE PREY RALNATKLERVFAKPFV
Sbjct: 2 KVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVAS 61
Query: 391 --GPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448
G R+ + + TK AK + G DG + P + T A++G V+
Sbjct: 62 LDGHRDVISCI--TK----HAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVR-- 113
Query: 449 NLTSQSC 455
+ S+ C
Sbjct: 114 GICSRFC 120
>UNIPROTKB|A1A5G2 [details] [associations]
symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=ISS] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005737 GO:GO:0006284 GO:GO:0006511
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5077
MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857 EMBL:BC128636
RefSeq:NP_001090710.1 UniGene:Str.45630 ProteinModelPortal:A1A5G2
STRING:A1A5G2 GeneID:100036690 KEGG:xtr:100036690
Xenbase:XB-GENE-5760041 HOGENOM:HOG000037524 Uniprot:A1A5G2
Length = 1354
Score = 656 (236.0 bits), Expect = 4.3e-64, Sum P(2) = 4.3e-64
Identities = 117/169 (69%), Positives = 145/169 (85%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 231 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 286
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYVKCLECG E R DTFLDIPL +RPFGS+ A+G + EA++AF++PETLDG N
Sbjct: 287 YQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPETLDGPN 346
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C +KCDA KGLKF FPYLLTL L RFDFDY++MHRIKLND++
Sbjct: 347 QYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRM 395
Score = 400 (145.9 bits), Expect = 6.3e-34, P = 6.3e-34
Identities = 76/112 (67%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + +SI YQLQ+LFV LQTS + A+ETT
Sbjct: 181 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLLQTSKKRAIETT 240
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 241 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 288
Score = 37 (18.1 bits), Expect = 4.3e-64, Sum P(2) = 4.3e-64
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHI 253
C+L Q F++ N + W E SE D +
Sbjct: 183 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPV 215
>UNIPROTKB|Q5U252 [details] [associations]
symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
species:8355 "Xenopus laevis" [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006284 "base-excision repair" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035520 "monoubiquitinated protein deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
GO:GO:0006284 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
GO:GO:0035520 MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857
EMBL:BC086278 RefSeq:NP_001088634.1 UniGene:Xl.49309
ProteinModelPortal:Q5U252 GeneID:495686 KEGG:xla:495686
Xenbase:XB-GENE-5760104 Uniprot:Q5U252
Length = 1350
Score = 652 (234.6 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 116/169 (68%), Positives = 144/169 (85%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 230 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 285
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYVKCLECG E R DTFLDIPL +RP+GS+ A+G + EA+ AF++PETLDG N
Sbjct: 286 YQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPN 345
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C +KCDA KGLKF FPYLLTL L RFDFDY++MHRIKLND++
Sbjct: 346 QYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRM 394
Score = 400 (145.9 bits), Expect = 6.2e-34, P = 6.2e-34
Identities = 76/112 (67%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + +SI YQLQ+LFV LQTS + A+ETT
Sbjct: 180 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLLQTSKKRAIETT 239
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 240 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 287
Score = 37 (18.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHI 253
C+L Q F++ N + W E SE D +
Sbjct: 182 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPV 214
>UNIPROTKB|F1PZF8 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:AAEX03012912
Ensembl:ENSCAFT00000012458 Uniprot:F1PZF8
Length = 1349
Score = 639 (230.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 219 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 274
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 275 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 334
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 335 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 383
Score = 404 (147.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 169 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 228
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 229 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 276
Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 171 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 206
>UNIPROTKB|E9PM46 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AC124276 EMBL:AC104383 HGNC:HGNC:20076 ChiTaRS:USP47
IPI:IPI00985193 ProteinModelPortal:E9PM46 SMR:E9PM46 PRIDE:E9PM46
Ensembl:ENST00000527733 UCSC:uc001mjs.3 ArrayExpress:E9PM46
Bgee:E9PM46 Uniprot:E9PM46
Length = 1355
Score = 639 (230.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 225 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 280
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 281 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 340
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 341 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 389
Score = 404 (147.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 175 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 234
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 235 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 282
Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 177 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 212
>RGD|1310411 [details] [associations]
symbol:Usp47 "ubiquitin specific peptidase 47" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA;ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0030307 "positive regulation of cell growth"
evidence=IEA;ISO] [GO:0034644 "cellular response to UV"
evidence=IEA;ISO] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0071987
"WD40-repeat domain binding" evidence=IEA;ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1310411 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55031 KO:K11857
EMBL:AC147546 IPI:IPI00870919 RefSeq:NP_001101012.2
UniGene:Rn.101536 PRIDE:F1MAA1 Ensembl:ENSRNOT00000065712
GeneID:308896 KEGG:rno:308896 UCSC:RGD:1310411 NextBio:659738
ArrayExpress:F1MAA1 Uniprot:F1MAA1
Length = 1355
Score = 639 (230.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 225 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 280
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 281 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 340
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 341 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 389
Score = 404 (147.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 175 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 234
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 235 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 282
Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 177 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 212
>UNIPROTKB|E9PT09 [details] [associations]
symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010972 "negative regulation of G2/M
transition of mitotic cell cycle" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
response to UV" evidence=IEA] [GO:0035520 "monoubiquitinated
protein deubiquitination" evidence=IEA] [GO:0042493 "response to
drug" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
RGD:1310411 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AC147546
IPI:IPI00950497 Ensembl:ENSRNOT00000064293 ArrayExpress:E9PT09
Uniprot:E9PT09
Length = 1357
Score = 639 (230.0 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 225 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 280
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 281 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 340
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 341 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 389
Score = 404 (147.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 175 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 234
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 235 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 282
Score = 38 (18.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 177 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 212
>UNIPROTKB|F1LYA3 [details] [associations]
symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1310411 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
GO:GO:0010972 EMBL:AC147546 IPI:IPI00949212
Ensembl:ENSRNOT00000022817 ArrayExpress:F1LYA3 Uniprot:F1LYA3
Length = 1363
Score = 639 (230.0 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 232 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 287
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 288 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 347
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 348 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 396
Score = 404 (147.3 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 182 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 241
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 242 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 289
Score = 38 (18.4 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 184 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 219
>UNIPROTKB|F1N1Z2 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0071987 "WD40-repeat domain binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0035520 "monoubiquitinated protein deubiquitination"
evidence=IEA] [GO:0034644 "cellular response to UV" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0045892
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0042493
GO:GO:0006284 GO:GO:0006511 GO:GO:0019005 GO:GO:0034644
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 GO:GO:0010972
GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:DAAA02040680
EMBL:DAAA02040681 IPI:IPI00693512 Ensembl:ENSBTAT00000014505
ArrayExpress:F1N1Z2 Uniprot:F1N1Z2
Length = 1375
Score = 639 (230.0 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 245 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 300
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Score = 404 (147.3 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 195 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 254
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 255 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 302
Score = 38 (18.4 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 197 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 232
>UNIPROTKB|Q96K76 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase 47"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0043154 "negative regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0034644 "cellular response to UV" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0071987
"WD40-repeat domain binding" evidence=IPI] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0010972
"negative regulation of G2/M transition of mitotic cell cycle"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IDA] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0045892
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0042493
GO:GO:0006284 GO:GO:0006511 GO:GO:0019005 GO:GO:0034644
GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 GO:GO:0010972
EMBL:AC124276 eggNOG:COG5077 OMA:NKSETGY EMBL:AK000734
EMBL:AK027362 EMBL:AK092290 EMBL:AK127264 EMBL:AC104383
EMBL:BC000226 EMBL:BC047044 EMBL:AK074076 EMBL:AL832991
IPI:IPI00165528 IPI:IPI00607554 IPI:IPI00607731 RefSeq:NP_060414.3
UniGene:Hs.577256 ProteinModelPortal:Q96K76 SMR:Q96K76
IntAct:Q96K76 STRING:Q96K76 MEROPS:C19.055 PhosphoSite:Q96K76
DMDM:68566222 PaxDb:Q96K76 PRIDE:Q96K76 Ensembl:ENST00000339865
Ensembl:ENST00000399455 Ensembl:ENST00000539466 GeneID:55031
KEGG:hsa:55031 UCSC:uc001mjq.1 UCSC:uc001mjr.3 UCSC:uc009ygi.3
CTD:55031 GeneCards:GC11P011819 HGNC:HGNC:20076 HPA:HPA029286
HPA:HPA029289 MIM:614460 neXtProt:NX_Q96K76 PharmGKB:PA134880952
HOVERGEN:HBG058854 InParanoid:Q96K76 KO:K11857 ChiTaRS:USP47
GenomeRNAi:55031 NextBio:58447 ArrayExpress:Q96K76 Bgee:Q96K76
CleanEx:HS_USP47 Genevestigator:Q96K76 GermOnline:ENSG00000170242
Uniprot:Q96K76
Length = 1375
Score = 639 (230.0 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 245 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 300
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Score = 404 (147.3 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 195 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 254
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 255 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 302
Score = 38 (18.4 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 197 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 232
>MGI|MGI:1922246 [details] [associations]
symbol:Usp47 "ubiquitin specific peptidase 47" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0010972
"negative regulation of G2/M transition of mitotic cell cycle"
evidence=ISO;ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
[GO:0030307 "positive regulation of cell growth" evidence=ISO;ISS]
[GO:0034644 "cellular response to UV" evidence=IMP] [GO:0035520
"monoubiquitinated protein deubiquitination" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;IMP]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0071987 "WD40-repeat domain binding"
evidence=ISO] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1922246
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0042493 GO:GO:0006284 GO:GO:0006511
GO:GO:0019005 GO:GO:0034644 GO:GO:0004843 GO:GO:0004221
GO:GO:0035520 GO:GO:0010972 eggNOG:COG5077
GeneTree:ENSGT00630000089581 OMA:NKSETGY MEROPS:C19.055 CTD:55031
HOVERGEN:HBG058854 KO:K11857 EMBL:AK030909 EMBL:AK030963
EMBL:AK041541 EMBL:AK082114 EMBL:AK087981 EMBL:AK131138
EMBL:BC012722 EMBL:BC024117 EMBL:BC089364 EMBL:BC108425
IPI:IPI00420143 IPI:IPI00608091 RefSeq:NP_598519.2
RefSeq:NP_796223.2 UniGene:Mm.16974 ProteinModelPortal:Q8BY87
SMR:Q8BY87 STRING:Q8BY87 PaxDb:Q8BY87 PRIDE:Q8BY87
Ensembl:ENSMUST00000106653 GeneID:74996 KEGG:mmu:74996
UCSC:uc009jgg.2 UCSC:uc009jgh.2 InParanoid:Q32NY0 OrthoDB:EOG4BRWJW
NextBio:341978 Bgee:Q8BY87 CleanEx:MM_USP47 Genevestigator:Q8BY87
GermOnline:ENSMUSG00000059263 Uniprot:Q8BY87
Length = 1376
Score = 639 (230.0 bits), Expect = 3.2e-62, Sum P(2) = 3.2e-62
Identities = 114/169 (67%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 245 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINEL 300
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE LDG N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 409
Score = 406 (148.0 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 79/113 (69%), Positives = 96/113 (84%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE--TSITYQLQKLFVNLQTSTRPAVET 58
MTCYLNSL+Q LFMTPEFRNA+YKW++E D E+ TSI YQLQ+LFV LQTS + A+ET
Sbjct: 195 MTCYLNSLLQTLFMTPEFRNALYKWEFE-DSEEDPVTSIPYQLQRLFVLLQTSKKRAIET 253
Query: 59 TDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 254 TDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINELYQ 302
Score = 37 (18.1 bits), Expect = 3.2e-62, Sum P(2) = 3.2e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 197 CYLNSLLQTLFMTPEFRNALYKWEFEDSEEDPVTSI 232
>UNIPROTKB|E1C1R4 [details] [associations]
symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase 47"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0010972 "negative regulation
of G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
response to UV" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0035520 "monoubiquitinated protein
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
GO:GO:0010972 GeneTree:ENSGT00630000089581 EMBL:AADN02030606
EMBL:AADN02030607 IPI:IPI00587332 UniGene:Gga.5374
Ensembl:ENSGALT00000008932 OMA:NKSETGY Uniprot:E1C1R4
Length = 1375
Score = 636 (228.9 bits), Expect = 5.3e-62, Sum P(2) = 5.3e-62
Identities = 113/169 (66%), Positives = 142/169 (84%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 244 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 299
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
YQGK++DYV+CLECG E R DT+LDIPL +RP+GS+ A+ + EA+ AF++PE LDG N
Sbjct: 300 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN 359
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 360 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 408
Score = 404 (147.3 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 77/112 (68%), Positives = 94/112 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-TSITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + TSI YQLQ+LFV LQTS + A+ETT
Sbjct: 194 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 253
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 254 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 301
Score = 38 (18.4 bits), Expect = 5.3e-62, Sum P(2) = 5.3e-62
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 196 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSI 231
>DICTYBASE|DDB_G0276815 [details] [associations]
symbol:DDB_G0276815 "WD repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0276815 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0016567 GO:GO:0030529
EMBL:AAFI02000019 GO:GO:0006364 GO:GO:0080008 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 RefSeq:XP_642903.1
ProteinModelPortal:Q7KWL3 STRING:Q7KWL3 EnsemblProtists:DDB0168265
GeneID:8620769 KEGG:ddi:DDB_G0276815 Uniprot:Q7KWL3
Length = 445
Score = 560 (202.2 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 105/227 (46%), Positives = 148/227 (65%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+V+SR+ +E +E + + ++ RN+DP+LHPFE PREYVRALNATKL+RVFAKPF+ +L
Sbjct: 4 KVISRSEEEETKEKASDVRKLHRNLDPNLHPFERPREYVRALNATKLDRVFAKPFIGSLS 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH DGI + +HPT L+ + SG+ DG +K+WNLTS + T QAH+G VR + F PDG
Sbjct: 64 GHTDGIFTMTRHPTLLNNVASGSCDGVIKLWNLTSLTERTTVQAHNGFVRGLVFTPDGKH 123
Query: 231 FLSVGIDNTIKTWSSELSE---SDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGD-QCQL 286
+S G D TIK W +L E + ++ ++ HQ S FAT G ++
Sbjct: 124 MVSCGEDKTIKMWKLDLPEYTFNQEVISIYNGKNAFTSID--HQLNSTTFATSGPTSVEI 181
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+H+R+ PI+ W ++ V+FNPI+ H+LASC +DR IILYD R
Sbjct: 182 WKHQRSTPIQTLQWGHSTITKVKFNPIETHLLASCTTDRDIILYDIR 228
Score = 261 (96.9 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 49/80 (61%), Positives = 61/80 (76%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 447
PF PREYVRALNATKL+RVFAKPF+ +L GH DGI + +HPT L+ + SG+ DG +K+
Sbjct: 34 PFERPREYVRALNATKLDRVFAKPFIGSLSGHTDGIFTMTRHPTLLNNVASGSCDGVIKL 93
Query: 448 WNLTSQSCVQTYQAHDGHVR 467
WNLTS + T QAH+G VR
Sbjct: 94 WNLTSLTERTTVQAHNGFVR 113
Score = 198 (74.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391
V+SR+ +E +E + + ++ RN+DP+LHPFE PREYVRALNATKL+RVFAKPF+G
Sbjct: 5 VISRSEEEETKEKASDVRKLHRNLDPNLHPFERPREYVRALNATKLDRVFAKPFIG 60
Score = 45 (20.9 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
R +K + D H + + PT I+SG+YD ++++ + S + Y
Sbjct: 270 RNLSKAMTVHRD-HVGSVLDIDYSPTGRE-IVSGSYDKTIRIFPVDSYKSREVY 321
Score = 41 (19.5 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 436 IISGAYDGEVKVWNLTSQS 454
I+SG+ D ++VW S +
Sbjct: 341 ILSGSDDMNIRVWKANSSA 359
>WB|WBGene00011507 [details] [associations]
symbol:T05H10.1 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
EMBL:Z47812 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077
GeneTree:ENSGT00630000089581 KO:K11857 PIR:A88225 PIR:T24559
RefSeq:NP_495686.2 ProteinModelPortal:Q22240 SMR:Q22240
STRING:Q22240 MEROPS:C19.A38 PaxDb:Q22240 EnsemblMetazoa:T05H10.1
GeneID:174290 KEGG:cel:CELE_T05H10.1 UCSC:T05H10.1 CTD:174290
WormBase:T05H10.1 HOGENOM:HOG000020027 InParanoid:Q22240
OMA:TSNEAYD NextBio:883388 Uniprot:Q22240
Length = 1326
Score = 547 (197.6 bits), Expect = 1.4e-51, P = 1.4e-51
Identities = 99/169 (58%), Positives = 130/169 (76%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS ++ET DLT+SFGW S++A+ QHD+QELCR++FDALE ++KG+ + LI +L
Sbjct: 152 TSENDSLETKDLTQSFGWTSNEAYDQHDVQELCRLMFDALEHKWKGT----EHEKLIQDL 207
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
Y+G M D+V CL+CG E + D FLD+PL V+PFG+ AY + EA+ AFV+PE LDG+N
Sbjct: 208 YRGTMEDFVACLKCGRESVKTDYFLDLPLAVKPFGAIHAYKSVEEALTAFVQPELLDGSN 267
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
QY C+ C K DAHKGL+ T+FPYLLT+ L RFDFDY+TMHRIKLNDK+
Sbjct: 268 QYMCENCKSKQDAHKGLRITQFPYLLTIQLKRFDFDYNTMHRIKLNDKM 316
Score = 319 (117.4 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 65/119 (54%), Positives = 86/119 (72%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAE--------ETSITYQLQKLFVNLQTST 52
MTCYLNSL+Q+L+MTPEFRNA+Y W+Y A E SI QLQKLF+ LQTS
Sbjct: 95 MTCYLNSLVQSLYMTPEFRNAMYDWEYVQQPAHIKEQRKKAEQSIPCQLQKLFLLLQTSE 154
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
++ET DLT+SFGW S++A+ QHD+QELCR++FDALE ++KG+ + LI +LY+
Sbjct: 155 NDSLETKDLTQSFGWTSNEAYDQHDVQELCRLMFDALEHKWKGT----EHEKLIQDLYR 209
>WB|WBGene00022742 [details] [associations]
symbol:ZK430.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040039 "inductive cell migration"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040039
GO:GO:0007276 GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:FO080155
PIR:T27863 RefSeq:NP_494781.1 ProteinModelPortal:Q23494 SMR:Q23494
STRING:Q23494 PaxDb:Q23494 EnsemblMetazoa:ZK430.7.1
EnsemblMetazoa:ZK430.7.2 GeneID:173778 KEGG:cel:CELE_ZK430.7
UCSC:ZK430.7.1 CTD:173778 WormBase:ZK430.7 InParanoid:Q23494
NextBio:881057 Uniprot:Q23494
Length = 444
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 102/242 (42%), Positives = 141/242 (58%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+V+SRNP+ Y RET ++I RN + PF EY RALNATKLERVFAKPFVA+LD
Sbjct: 4 KVISRNPNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFVASLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF-LPDGS 229
GH DG+ LAKHP + ST+ SGA DG+VK+WNL S+ C T AH G V D+ +G
Sbjct: 64 GHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDISIDNNNGE 123
Query: 230 QFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
F++VG DN +K W E + P H+ H S F TCG+ +W+
Sbjct: 124 NFVTVGQDNQLKYWKIEGQQK---TPAHSIAMDGIVYGVSHLSFSSDFVTCGEDISVWKP 180
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETK 349
R P+R+++ D++H + NP++++++ SDRSI + DTR V + +R K
Sbjct: 181 YRETPLRSYNLGTDTIHTCRANPVEENVIVGARSDRSIYVLDTRQDVPLKKVTMKMRPNK 240
Query: 350 TS 351
S
Sbjct: 241 IS 242
Score = 286 (105.7 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 61/107 (57%), Positives = 69/107 (64%)
Query: 369 PREYVRALN--ATKLERVF---AKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGI 423
P Y R K+ R F A PF EY RALNATKLERVFAKPFVA+LDGH DG+
Sbjct: 10 PNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFVASLDGHVDGV 69
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTS 470
LAKHP + ST+ SGA DG+VK+WNL S+ C T AH G V D S
Sbjct: 70 QVLAKHPNRPSTVFSGARDGQVKIWNLASRECQATLDAHRGLVNDIS 116
Score = 160 (61.4 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 33/55 (60%), Positives = 38/55 (69%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
V+SRNP+ Y RET ++I RN + PF EY RALNATKLERVFAKPFV
Sbjct: 5 VISRNPNTYQRETTDKRNKIVRNFNTPADPFRSQVEYTRALNATKLERVFAKPFV 59
Score = 49 (22.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 14/69 (20%), Positives = 29/69 (42%)
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ-A 461
K+ + ++ A LD H+ ++ ++ ++ D ++K W + Q + A
Sbjct: 92 KIWNLASRECQATLDAHRGLVNDISIDNNNGENFVTVGQDNQLKYWKIEGQQKTPAHSIA 151
Query: 462 HDGHVRDTS 470
DG V S
Sbjct: 152 MDGIVYGVS 160
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 98/249 (39%), Positives = 148/249 (59%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+ LSR+ DEY RE + R+ N DPSL P E EY RAL A KLE++FA+PFV +D
Sbjct: 4 KTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVGAMD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+DG+SC+AK+P L I S + DG++++W+++S+ V + H G VR + DG+
Sbjct: 64 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 123
Query: 231 FLSVGIDNTIKTWS--------SELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGD 282
+S G D T++ W+ S +S + I P T HQ + +FAT G
Sbjct: 124 LVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGA 183
Query: 283 QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPD 342
Q +W H R++P+++F W DS+ V+FNP + ++LA+ ASDRSI +YD R + +R
Sbjct: 184 QLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR--- 240
Query: 343 EYLRETKTS 351
+ + TKT+
Sbjct: 241 KIIMMTKTN 249
Score = 222 (83.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 45/103 (43%), Positives = 66/103 (64%)
Query: 371 EYVRALNATKLERVFAK--PFVGPRE----YVRALNATKLERVFAKPFVANLDGHKDGIS 424
EY R + L+RVF P + P E Y RAL A KLE++FA+PFV +DGH+DG+S
Sbjct: 12 EYTRE-RSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVGAMDGHRDGVS 70
Query: 425 CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
C+AK+P L I S + DG++++W+++S+ V + H G VR
Sbjct: 71 CMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVR 113
Score = 198 (74.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 66/225 (29%), Positives = 109/225 (48%)
Query: 245 SELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDS 304
S +S + I P T HQ + +FAT G Q +W H R++P+++F W DS
Sbjct: 146 SSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDS 205
Query: 305 LHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKT-SIHRIPR------ 357
+ V+FNP + ++LA+ ASDRSI +YD R + +R + + TKT SI P
Sbjct: 206 VISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR---KIIMMTKTNSIAWNPMEPMNLT 262
Query: 358 --NIDPSLHPFEGPR-EYVRALNATKLERVFAKPFVGP--REYVRALNATKLERVFAKPF 412
N D S + F+G + + + ++ + V F P RE+V + + R+F P+
Sbjct: 263 AANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDF-SPTGREFVTG-SYDRSVRIF--PY 318
Query: 413 VANLDGHK---------DGISCLAKHPTKLSTIISGAYDGEVKVW 448
N GH + C+ K+ + +ISG+ D +++W
Sbjct: 319 --N-GGHSREIYHTKRMQRVFCV-KYSCDATYVISGSDDTNLRLW 359
Score = 39 (18.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 41 LQKLFVNLQTSTRPAVETTDLTRS 64
LQ++F N S RP + + R+
Sbjct: 21 LQRVFHNFDPSLRPMEKAVEYQRA 44
>UNIPROTKB|F1S6W7 [details] [associations]
symbol:USP47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:CU462938
Ensembl:ENSSSCT00000014642 Uniprot:F1S6W7
Length = 1084
Score = 451 (163.8 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 79/115 (68%), Positives = 96/115 (83%)
Query: 523 DLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPE 582
DLIN LYQGK++DYV+CLECG E R DT+LDIPL +RP+GSS A+ + EA+ AF++PE
Sbjct: 1 DLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPE 60
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
LDG NQYFC++C KKCDA KGL+F FPYLLTL L RFDFDY+TMHRIKLND++
Sbjct: 61 ILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM 115
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 309 (113.8 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANL- 169
+ +SR+ D Y+ T +PRN++P+LHPFE REY RAL ATKLER+FA+PF+ L
Sbjct: 4 KTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIGQLG 63
Query: 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229
DGH+DG+ +AK+ + I SG+ DG +K WNLT + +++AH G V +C +
Sbjct: 64 DGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASFKAHYGMVSGICIY--AN 121
Query: 230 QFLSVGIDNTIKTWSSELSESD 251
+ S G D TIK WS + D
Sbjct: 122 KMYSCGDDKTIKIWSVNSDDFD 143
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPTKLSTIISGAYDGEVK 446
PF REY RAL ATKLER+FA+PF+ L DGH+DG+ +AK+ + I SG+ DG +K
Sbjct: 34 PFERAREYTRALQATKLERMFAQPFIGQLGDGHRDGVYFIAKNYQATNQIASGSGDGIIK 93
Query: 447 VWNLTSQSCVQTYQAHDGHV 466
WNLT + +++AH G V
Sbjct: 94 YWNLTDRLETASFKAHYGMV 113
Score = 171 (65.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391
+ +SR+ D Y+ T +PRN++P+LHPFE REY RAL ATKLER+FA+PF+G
Sbjct: 2 KVKTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIG 60
Score = 139 (54.0 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
H R +F T G QLW+ R++ I SW D++ V+FN + +I+AS SD SI+L
Sbjct: 187 HHRDDDLFVTGGATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVL 246
Query: 330 YDTR 333
YD R
Sbjct: 247 YDIR 250
Score = 47 (21.6 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAHDGHVRDTSTRP 473
+C+ +P + +G D ++++ + Q ++ Y+ H G + D P
Sbjct: 265 NCITWNPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAP 315
Score = 45 (20.9 bits), Expect = 3.3e-38, Sum P(3) = 3.3e-38
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448
GH I + PT +++G+YD +++W
Sbjct: 303 GHVGAIMDVDFAPTG-QELVTGSYDKTIRLW 332
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 309 (113.8 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 62/142 (43%), Positives = 88/142 (61%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANL- 169
+ +SR+ D Y+ T +PRN++P+LHPFE REY RAL ATKLER+FA+PF+ L
Sbjct: 4 KTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIGQLG 63
Query: 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229
DGH+DG+ +AK+ + I SG+ DG +K WNLT + +++AH G V +C +
Sbjct: 64 DGHRDGVYFIAKNYQATNQIASGSGDGIIKYWNLTDRLETASFKAHYGMVSGICIY--AN 121
Query: 230 QFLSVGIDNTIKTWSSELSESD 251
+ S G D TIK WS + D
Sbjct: 122 KMYSCGDDKTIKIWSVNSDDFD 143
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPTKLSTIISGAYDGEVK 446
PF REY RAL ATKLER+FA+PF+ L DGH+DG+ +AK+ + I SG+ DG +K
Sbjct: 34 PFERAREYTRALQATKLERMFAQPFIGQLGDGHRDGVYFIAKNYQATNQIASGSGDGIIK 93
Query: 447 VWNLTSQSCVQTYQAHDGHV 466
WNLT + +++AH G V
Sbjct: 94 YWNLTDRLETASFKAHYGMV 113
Score = 171 (65.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 333 RATVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVG 391
+ +SR+ D Y+ T +PRN++P+LHPFE REY RAL ATKLER+FA+PF+G
Sbjct: 2 KVKTISRSSDTYIPVKNTQESALPRNLNPALHPFERAREYTRALQATKLERMFAQPFIG 60
Score = 139 (54.0 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
H R +F T G QLW+ R++ I SW D++ V+FN + +I+AS SD SI+L
Sbjct: 187 HHRDDDLFVTGGATIQLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVL 246
Query: 330 YDTR 333
YD R
Sbjct: 247 YDIR 250
Score = 47 (21.6 bits), Expect = 2.1e-38, Sum P(3) = 2.1e-38
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAHDGHVRDTSTRP 473
+C+ +P + +G D ++++ + Q ++ Y+ H G + D P
Sbjct: 265 NCITWNPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAP 315
Score = 45 (20.9 bits), Expect = 3.3e-38, Sum P(3) = 3.3e-38
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448
GH I + PT +++G+YD +++W
Sbjct: 303 GHVGAIMDVDFAPTG-QELVTGSYDKTIRLW 332
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 404 (147.3 bits), Expect = 2.7e-37, P = 2.7e-37
Identities = 114/351 (32%), Positives = 174/351 (49%)
Query: 126 TSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPT 184
+++ R PRN+DP+ HPFE REY RALNA KLER+FA PF+ + +GH DG+ +AK P
Sbjct: 18 SAVARQPRNLDPAQHPFERAREYTRALNAVKLERLFAAPFLGQMGEGHVDGVYTMAKDPG 77
Query: 185 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244
L SG+ DG VKVW+L +Q V AH+ V+ VC+ PD + LS D TIK +
Sbjct: 78 SLERFASGSGDGVVKVWDLVTQGEVWNNTAHENIVKGVCWTPD-RKLLSCAADKTIKLFD 136
Query: 245 SELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHER--NEPIRAFSW-- 300
S S+ PL T H R FA Q +++ R + P + W
Sbjct: 137 PYNSSSES-PPLATYLGQGAFTSLTHHRDQPFFAASSSQISIYDLSRPSSTPSQTLHWPT 195
Query: 301 NVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT------VLSRNPDEYLRETKTSIHR 354
+VD++ V FN + +LAS DRSIILYD R + VL + + +
Sbjct: 196 SVDTITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKLVLKLASNAVSWNPMEAFNF 255
Query: 355 IPRNIDPSLHPFEGPREYVRALNATK--LERVFAKPFVGPREYVRALNATKLERVFAKPF 412
N D +++ F+ R+ RALN K + V F E + + + R++ +
Sbjct: 256 AVANEDHNVYMFD-MRKMNRALNVLKDHVAAVMDVDFSPTGEELVTASYDRTIRLWNRAT 314
Query: 413 VANLD-GHKDGISCL--AKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQT 458
+ D H + + AK ++SG+ DG +++W N + +S +++
Sbjct: 315 GHSRDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRANASDRSGIKS 365
Score = 194 (73.4 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANL-DGHKDGISCLAKHPTKLSTIISGAYDGEVK 446
PF REY RALNA KLER+FA PF+ + +GH DG+ +AK P L SG+ DG VK
Sbjct: 33 PFERAREYTRALNAVKLERLFAAPFLGQMGEGHVDGVYTMAKDPGSLERFASGSGDGVVK 92
Query: 447 VWNLTSQSCVQTYQAHDGHVRDTSTRP 473
VW+L +Q V AH+ V+ P
Sbjct: 93 VWDLVTQGEVWNNTAHENIVKGVCWTP 119
>ZFIN|ZDB-GENE-070719-7 [details] [associations]
symbol:usp47 "ubiquitin specific peptidase 47"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 ZFIN:ZDB-GENE-070719-7
GO:GO:0006511 GO:GO:0004221 CTD:55031 KO:K11857 EMBL:BC146749
IPI:IPI00498805 RefSeq:NP_001093619.1 UniGene:Dr.149776
ProteinModelPortal:A6H8T9 GeneID:100101645 KEGG:dre:100101645
HOGENOM:HOG000208242 HOVERGEN:HBG099206 NextBio:20788686
Uniprot:A6H8T9
Length = 357
Score = 395 (144.1 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 77/113 (68%), Positives = 94/113 (83%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE--TSITYQLQKLFVNLQTSTRPAVET 58
MTCYLNSL+Q LFMTPEFRNA+Y W++E D E+ TSI YQLQ+LFV LQTS + +ET
Sbjct: 177 MTCYLNSLLQTLFMTPEFRNALYNWEFE-DSEEDPVTSIPYQLQRLFVLLQTSKKRDIET 235
Query: 59 TDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN LYQ
Sbjct: 236 TDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQLYQ 284
Score = 373 (136.4 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 67/104 (64%), Positives = 87/104 (83%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
TS + +ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K + +QADLIN L
Sbjct: 227 TSKKRDIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----EQADLINQL 282
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDII 572
YQGK++DYV+CLECG E R DT+LDIPL +RPFG+S A+G ++
Sbjct: 283 YQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVV 326
Score = 38 (18.4 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D + +
Sbjct: 179 CYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVTSI 214
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 360 (131.8 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 80/207 (38%), Positives = 116/207 (56%)
Query: 131 IPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTI 189
+ RN+DPSLHPFE REY RALNATK++R+FA PF+ L GH+DG+ LA+ L
Sbjct: 21 VKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARDTKTLIDC 80
Query: 190 ISGAYDGEVKVWNLTSQSCVQ-TYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248
SG+ DG VK+W+ S+ C + T +AH+G VR + F G LS D + L+
Sbjct: 81 ASGSGDGAVKLWD-ASERCERWTSKAHEGIVRGLVFSNQGD-VLSCASDRYVYM----LN 134
Query: 249 ESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHV 308
+ D V + + +FAT G+ +W++ R+ P+ F W D+L V
Sbjct: 135 KQDGKVK-RSYLGDSSLLDIDTSKGGDLFATSGENVSIWDYSRDTPVTKFEWGADTLPVV 193
Query: 309 QFNPIDKHILASCASDRSIILYDTRAT 335
+FN + +LAS DRSI++YD R +
Sbjct: 194 KFNYTETSVLASAGMDRSIVIYDLRTS 220
Score = 183 (69.5 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTIISGAYDGEVK 446
PF REY RALNATK++R+FA PF+ L GH+DG+ LA+ L SG+ DG VK
Sbjct: 31 PFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARDTKTLIDCASGSGDGAVK 90
Query: 447 VWNLTSQSCVQ-TYQAHDGHVR 467
+W+ S+ C + T +AH+G VR
Sbjct: 91 LWD-ASERCERWTSKAHEGIVR 111
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 42/112 (37%), Positives = 57/112 (50%)
Query: 355 IPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPFVA 414
+ RN+DPSLHPFE REY RALNATK++R+FA PF+G L R K +
Sbjct: 21 VKRNLDPSLHPFERAREYTRALNATKMDRMFAAPFLGQLGRGHQDGVYSLARD-TKTLID 79
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
G DG L + S A++G V+ ++Q V + A D +V
Sbjct: 80 CASGSGDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQGDVLSC-ASDRYV 130
Score = 45 (20.9 bits), Expect = 7.6e-35, Sum P(2) = 7.6e-35
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 419 HKDGISCLAK---HPTKLSTIISGAYDGEVKVWNL 450
+KD +S + PT +SG+YD ++++N+
Sbjct: 269 YKDHVSAVMSVDFSPTG-QEFVSGSYDKTIRIYNV 302
>UNIPROTKB|I3LAJ2 [details] [associations]
symbol:I3LAJ2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 EMBL:CU928987
Ensembl:ENSSSCT00000029294 OMA:NRASFIT Uniprot:I3LAJ2
Length = 122
Score = 368 (134.6 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 67/95 (70%), Positives = 82/95 (86%)
Query: 1 MTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET-SITYQLQKLFVNLQTSTRPAVETT 59
MTCYLNSL+Q LFMTPEFRNA+YKW++E + SI YQLQ+LFV LQTS + A+ETT
Sbjct: 18 MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVMSIPYQLQRLFVLLQTSKKRAIETT 77
Query: 60 DLTRSFGWESSDAWQQHDIQELCRVLFDALETQFK 94
D+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K
Sbjct: 78 DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWK 112
Score = 193 (73.0 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 33/45 (73%), Positives = 42/45 (93%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFK 513
TS + A+ETTD+TRSFGW+SS+AWQQHD+QELCRV+FDALE ++K
Sbjct: 68 TSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWK 112
Score = 39 (18.8 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 223 CFLPDGSQ--FLSVGIDNTIKTWSSELSESDHIVPL 256
C+L Q F++ N + W E SE D ++ +
Sbjct: 20 CYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVMSI 55
>DICTYBASE|DDB_G0289611 [details] [associations]
symbol:usp40 "putative ubiquitin carboxyl-terminal
hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
dictyBase:DDB_G0289611 GO:GO:0008234 GenomeReviews:CM000154_GR
GO:GO:0006511 GO:GO:0004221 EMBL:AAFI02000147 eggNOG:COG5077
KO:K11869 RefSeq:XP_636128.1 ProteinModelPortal:Q54H96
EnsemblProtists:DDB0237742 GeneID:8627231 KEGG:ddi:DDB_G0289611
OMA:EEQDIRI Uniprot:Q54H96
Length = 1677
Score = 308 (113.5 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 70/166 (42%), Positives = 99/166 (59%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A+ T DLT+SFGW S ++ Q DI EL RVLFDA+E K KT + L N+LY+G
Sbjct: 411 AISTEDLTKSFGWNGSQSFHQQDIHELNRVLFDAVEHSIK--KTPIET--LFNDLYKGYF 466
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAM-RAFVRPETLDGANQYFC 592
+ + C +CGT K ++ F DIP+ V+ F S I E++ +F PETLDG N Y C
Sbjct: 467 VNRLTCTKCGTIKDSQEHFQDIPIGVKGFNS------IEESLVGSFSTPETLDGRNMYSC 520
Query: 593 DKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+KC +K A +K + P +L L RFD+D+ R+KL+++ E
Sbjct: 521 EKCNEKVVATFQVKLGKIPKILIFALRRFDYDFQRGTRVKLHNRFE 566
Score = 157 (60.3 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 37/75 (49%), Positives = 47/75 (62%)
Query: 37 ITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGS 96
I Y+LQ+LF LQ A+ T DLT+SFGW S ++ Q DI EL RVLFDA+E K
Sbjct: 393 IPYELQRLFSMLQKGDVYAISTEDLTKSFGWNGSQSFHQQDIHELNRVLFDAVEHSIK-- 450
Query: 97 KTTGDQADLINNLYQ 111
KT + L N+LY+
Sbjct: 451 KTPIET--LFNDLYK 463
Score = 97 (39.2 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYK 24
TCYLNSLIQ L+MTPE +N +YK
Sbjct: 61 TCYLNSLIQMLYMTPELKNDIYK 83
Score = 49 (22.3 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 439 GAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQ 498
G Y +K S ++ Q D + +TST TT T + S + ++++ +
Sbjct: 613 GHYHSYIKDLQSIGNSTLKVDQQQDKDI-NTSTTTTTNTTTTTTTTNTASDNKIEENEKK 671
Query: 499 E-LCRVLFDALETQFKGSKTTG 519
E L + + E +G+K TG
Sbjct: 672 EKLNKNKENDEENDEEGNKFTG 693
Score = 38 (18.4 bits), Expect = 5.4e-11, Sum P(3) = 5.4e-11
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 332 TRATVLSRNPDEYLRETKTSIHRIPRNIDPSLHP 365
T A + P L + K++I+++ I L+P
Sbjct: 1060 TSAPLTESPPVRVLSDPKSTIYQLKETIFDMLYP 1093
>POMBASE|SPBC713.02c [details] [associations]
symbol:ubp15 "ubiquitin C-terminal hydrolase Ubp15"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IMP] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0030133 "transport vesicle"
evidence=IDA] [GO:0032153 "cell division site" evidence=IDA]
[GO:0033554 "cellular response to stress" evidence=IEP]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
PomBase:SPBC713.02c GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0032153 EMBL:CU329671 GO:GO:0006897 GenomeReviews:CU329671_GR
GO:GO:0006511 GO:GO:0030133 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 SUPFAM:SSF49599 eggNOG:COG5077 HOGENOM:HOG000160240
KO:K11838 OMA:RLFVKSS InterPro:IPR024729 Pfam:PF12436
OrthoDB:EOG4ZW8K5 EMBL:AF187961 RefSeq:NP_595341.1
ProteinModelPortal:Q9UTT1 SMR:Q9UTT1 IntAct:Q9UTT1 STRING:Q9UTT1
MEROPS:C19.A59 EnsemblFungi:SPBC713.02c.1 GeneID:2541131
KEGG:spo:SPBC713.02c NextBio:20802244 Uniprot:Q9UTT1
Length = 1129
Score = 312 (114.9 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 69/167 (41%), Positives = 101/167 (60%)
Query: 472 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQG 531
R V TT+LTRSFGW S D++ QHDIQE RVL D LE + KG++ + +N+++ G
Sbjct: 287 REPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEVE----NALNDIFVG 342
Query: 532 KMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYF 591
KM+ YVKC++ E SR + F DI L V+ + + ++ R ++ ETL G N+Y+
Sbjct: 343 KMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDT------LEDSFRDAIQVETLTGDNKYY 396
Query: 592 CDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ G + DAHKG+ F P +L L L RFD+D +K+ND+ E
Sbjct: 397 AEGHGLQ-DAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHE 442
Score = 253 (94.1 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 52/104 (50%), Positives = 69/104 (66%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q+LF T FR VYK +ND + + S+ Y LQ++F NL+ P V TT+L
Sbjct: 238 TCYMNSLLQSLFFTNIFRKTVYKIPTDNDDSRD-SVAYALQRVFYNLEKQREP-VSTTEL 295
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL 105
TRSFGW S D++ QHDIQE RVL D LE + KG++ D+
Sbjct: 296 TRSFGWNSFDSFMQHDIQEFNRVLQDNLEKKMKGTEVENALNDI 339
>GENEDB_PFALCIPARUM|PFD0455w [details] [associations]
symbol:PFD0455w "ribosomal processing protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0000154
"rRNA modification" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 272 (100.8 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 52/133 (39%), Positives = 77/133 (57%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++L RNP+EY TS ++ R+ D +H F+ EY RALNATK++++FAKP + LD
Sbjct: 4 KILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIKCLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH D I + LS + SG+ +G + +WN+ + ++ +AHDG VR +C D
Sbjct: 64 GHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYDEKF 123
Query: 231 FLSVGIDNTIKTW 243
S G D IK W
Sbjct: 124 LFSCGDDKYIKQW 136
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 363 LHPFEGPREYVRALNATKLERV--FAKP---FVGPREYVRALNATKLERVFAKPFVANLD 417
LH P EY + + V F K F EY RALNATK++++FAKP + LD
Sbjct: 6 LH--RNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIKCLD 63
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH D I + LS + SG+ +G + +WN+ + ++ +AHDG VR
Sbjct: 64 GHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVR 113
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
+L RNP+EY TS ++ R+ D +H F+ EY RALNATK++++FAKP +
Sbjct: 5 ILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLI 59
Score = 75 (31.5 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 281 GDQC-QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
G Q +W++ RN I +F +N + +++V+ N +++ SD SI + D R
Sbjct: 212 GSQTLDIWDYYRNNAISSFDYNNEYIYYVKCNYSQTNLVGLTLSDNSIGIVDIR 265
>UNIPROTKB|Q9U0J4 [details] [associations]
symbol:PFD0455w "40S ribosomal processing protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000154
"rRNA modification" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 272 (100.8 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 52/133 (39%), Positives = 77/133 (57%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
++L RNP+EY TS ++ R+ D +H F+ EY RALNATK++++FAKP + LD
Sbjct: 4 KILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIKCLD 63
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH D I + LS + SG+ +G + +WN+ + ++ +AHDG VR +C D
Sbjct: 64 GHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYDEKF 123
Query: 231 FLSVGIDNTIKTW 243
S G D IK W
Sbjct: 124 LFSCGDDKYIKQW 136
Score = 179 (68.1 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 41/110 (37%), Positives = 59/110 (53%)
Query: 363 LHPFEGPREYVRALNATKLERV--FAKP---FVGPREYVRALNATKLERVFAKPFVANLD 417
LH P EY + + V F K F EY RALNATK++++FAKP + LD
Sbjct: 6 LH--RNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIKCLD 63
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
GH D I + LS + SG+ +G + +WN+ + ++ +AHDG VR
Sbjct: 64 GHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVR 113
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 336 VLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFV 390
+L RNP+EY TS ++ R+ D +H F+ EY RALNATK++++FAKP +
Sbjct: 5 ILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLI 59
Score = 75 (31.5 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 281 GDQC-QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
G Q +W++ RN I +F +N + +++V+ N +++ SD SI + D R
Sbjct: 212 GSQTLDIWDYYRNNAISSFDYNNEYIYYVKCNYSQTNLVGLTLSDNSIGIVDIR 265
>FB|FBgn0030366 [details] [associations]
symbol:Usp7 "Ubiquitin-specific protease 7" species:7227
"Drosophila melanogaster" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006342 "chromatin
silencing" evidence=IGI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0035328 "transcriptionally silent chromatin"
evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS;IDA] [GO:0016578 "histone deubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005700 "polytene
chromosome" evidence=IDA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005634 GO:GO:0043234 EMBL:AE014298
GO:GO:0006511 GO:GO:0006342 GO:GO:0005700 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009
eggNOG:COG5077 KO:K11838 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 CTD:7874 EMBL:BT044531
RefSeq:NP_572779.2 UniGene:Dm.3592 ProteinModelPortal:Q9VYQ8
SMR:Q9VYQ8 IntAct:Q9VYQ8 MINT:MINT-805769 STRING:Q9VYQ8
MEROPS:C19.A52 PaxDb:Q9VYQ8 PRIDE:Q9VYQ8 EnsemblMetazoa:FBtr0073641
GeneID:32169 KEGG:dme:Dmel_CG1490 FlyBase:FBgn0030366
InParanoid:Q9VYQ8 OMA:THIPENE OrthoDB:EOG4NVX16 PhylomeDB:Q9VYQ8
ChiTaRS:USP7 GenomeRNAi:32169 NextBio:777232 Bgee:Q9VYQ8
GermOnline:CG1490 GO:GO:0035328 Uniprot:Q9VYQ8
Length = 1129
Score = 311 (114.5 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 73/174 (41%), Positives = 100/174 (57%)
Query: 465 HVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL 524
H RP V T LT+SFGWE+ D++ QHD+QE RVL D LE++ KG+ G
Sbjct: 292 HELQFGDRP-VGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGT---- 346
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
I L++GKM Y+KC +R +TF DI L ++ +I E+ + +V PETL
Sbjct: 347 IPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKD------KKNIYESFQDYVAPETL 400
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+G N+Y G + +A KG+ FT FP +L LHLMRF +D T IK ND+ E
Sbjct: 401 EGDNKYDAGVHGLQ-EASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFE 453
Score = 228 (85.3 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 56/150 (37%), Positives = 82/150 (54%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q L+ T R +VY+ E D + + S+ LQ++F LQ RP V T L
Sbjct: 249 TCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSK-SVGLSLQRVFHELQFGDRP-VGTKKL 306
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ--VLSRNPDE 119
T+SFGWE+ D++ QHD+QE RVL D LE++ KG+ G L + +N D
Sbjct: 307 TKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGLFEGKMSSYIKCKNVD- 365
Query: 120 YLRETKTSIHRIPRNIDPSLHPFEGPREYV 149
Y + + I NI + +E ++YV
Sbjct: 366 YNSTRYETFYDIQLNIKDKKNIYESFQDYV 395
>DICTYBASE|DDB_G0276443 [details] [associations]
symbol:usp7 "putative ubiquitin carboxyl-terminal
hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
dictyBase:DDB_G0276443 GO:GO:0008234 GenomeReviews:CM000151_GR
GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599 EMBL:AAFI02000015
eggNOG:COG5077 KO:K11838 OMA:DITEQIG RefSeq:XP_643147.1
ProteinModelPortal:Q869U4 MEROPS:C19.A72 EnsemblProtists:DDB0237687
GeneID:8620554 KEGG:ddi:DDB_G0276443 Uniprot:Q869U4
Length = 1306
Score = 307 (113.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 65/163 (39%), Positives = 101/163 (61%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AV T +LT+SFGW++ D + QHD+QEL RVL D L + KG+K G +++L++GK+
Sbjct: 360 AVGTKELTKSFGWDTMDIFTQHDVQELNRVLCDNLNDKMKGTKAEGT----VDDLFRGKI 415
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
++++KC + E ++ F D+ L V+ G DII + + E LDG+NQYF +
Sbjct: 416 KNFIKCEKVSFESKSDEYFYDLSLNVK--GCK----DIIASFDKYTETERLDGSNQYFAE 469
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDK 636
G + +A+KG+KF P +L LHL RF++D +K+NDK
Sbjct: 470 GFGLQ-NANKGVKFLSLPPVLNLHLKRFEYDPIRDENVKINDK 511
Score = 226 (84.6 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 50/104 (48%), Positives = 67/104 (64%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+QALF FR AVY+ +D + SI+ LQ++F LQ + AV T +L
Sbjct: 309 TCYMNSLLQALFHISPFRRAVYELPTISDDPTK-SISLALQRIFFKLQFGDK-AVGTKEL 366
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL 105
T+SFGW++ D + QHD+QEL RVL D L + KG+K G DL
Sbjct: 367 TKSFGWDTMDIFTQHDVQELNRVLCDNLNDKMKGTKAEGTVDDL 410
Score = 37 (18.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 487 ESSDAWQQHDIQELCRVLFDALETQFKGS 515
+S+ W + D E+ + FD + + GS
Sbjct: 558 KSNGEWFKFDDDEVTKSTFDRVSDESFGS 586
>CGD|CAL0000934 [details] [associations]
symbol:orf19.1777 species:5476 "Candida albicans" [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030133 "transport vesicle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0045859 "regulation of protein kinase activity"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 CGD:CAL0000934
GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599
EMBL:AACQ01000104 EMBL:AACQ01000105 eggNOG:COG5077 KO:K11838
InterPro:IPR024729 Pfam:PF12436 RefSeq:XP_714380.1
RefSeq:XP_714422.1 ProteinModelPortal:Q59XT0 STRING:Q59XT0
GeneID:3643949 GeneID:3643970 KEGG:cal:CaO19.1777
KEGG:cal:CaO19.9344 Uniprot:Q59XT0
Length = 1382
Score = 307 (113.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 67/170 (39%), Positives = 102/170 (60%)
Query: 469 TSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 528
T++ V T +LT+SFGW+SSDA+ QHD+QEL R+L D LET KGSK G +N++
Sbjct: 397 TNSNDPVGTLELTKSFGWDSSDAFTQHDVQELNRILMDKLETAMKGSKIEG----ALNDI 452
Query: 529 YQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGAN 588
+ GKM+ Y+KC+ E SR + F DI L V+ F + + ++ + ++ E L+G N
Sbjct: 453 FVGKMKSYIKCVNVPYESSRVEDFWDIQLNVKGFQT------LKQSFQNYIEIEMLEGEN 506
Query: 589 QYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+Y + DA KG+ F FP +L L L RF++D+ +K++D E
Sbjct: 507 KYQAGEEHGYQDAKKGVVFESFPPVLHLQLKRFEYDFMVDDLVKIDDFYE 556
Score = 234 (87.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 51/104 (49%), Positives = 66/104 (63%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCYLNSL+Q+ F T FR VY+ D ++ + LQ++F L S P V T +L
Sbjct: 353 TCYLNSLLQSYFTTKLFRKLVYE--IPTD-SKSAGVPLSLQRIFYLLTNSNDP-VGTLEL 408
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL 105
T+SFGW+SSDA+ QHD+QEL R+L D LET KGSK G D+
Sbjct: 409 TKSFGWDSSDAFTQHDVQELNRILMDKLETAMKGSKIEGALNDI 452
Score = 37 (18.1 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 94 KGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLH 140
K +K T D+ L NL S++ D ++ T S + R+I L+
Sbjct: 1053 KDNKATNDEIQLAKNL----SKSFDFWI-STNYSYQDLARDIAVKLN 1094
>UNIPROTKB|F5H2X1 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0006511
GO:GO:0004221 SUPFAM:SSF49599 EMBL:AC022167 HGNC:HGNC:12630
IPI:IPI00922910 ProteinModelPortal:F5H2X1 SMR:F5H2X1
Ensembl:ENST00000542333 ArrayExpress:F5H2X1 Bgee:F5H2X1
Uniprot:F5H2X1
Length = 509
Score = 296 (109.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 212 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 266
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 267 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 320
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 321 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 368
Score = 251 (93.4 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 164 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 221
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 222 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 281
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 282 RSDRREDYYDIQLSIKGKKNIFESFVDYV 310
>UNIPROTKB|Q60MK8 [details] [associations]
symbol:usp-7 "Ubiquitin carboxyl-terminal hydrolase 7"
species:6238 "Caenorhabditis briggsae" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005634 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009
EMBL:HE601533 eggNOG:COG5077 HOGENOM:HOG000160240 KO:K11838
RefSeq:XP_002636444.1 ProteinModelPortal:Q60MK8 SMR:Q60MK8
EnsemblMetazoa:CBG23105 GeneID:8578439 KEGG:cbr:CBG23105
CTD:8578439 WormBase:CBG23105 Uniprot:Q60MK8
Length = 1129
Score = 301 (111.0 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 67/150 (44%), Positives = 92/150 (61%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AVET LTR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++G M
Sbjct: 249 AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFRGNM 304
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ Y+KCL+ E SR ++F D+ L V S + A A+ PETLD N+Y
Sbjct: 305 KSYIKCLDVDYESSRTESFYDVQLNVLGMDS------LERAFDAYTTPETLDDDNKYDAG 358
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
G + A KG+KF E P +L + LMRF +
Sbjct: 359 DHGLQ-RAEKGVKFVELPPVLHVQLMRFQY 387
Score = 244 (91.0 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 50/110 (45%), Positives = 74/110 (67%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++Q+ + T FR AVY + + E++I +Q++F LQ S+ AVET L
Sbjct: 198 TCYMNSILQSFYFTTGFRRAVYNMEVGTE-PNESNIVLAMQRVFYELQMSSE-AVETNSL 255
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++
Sbjct: 256 TRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFR 301
>ZFIN|ZDB-GENE-030131-3656 [details] [associations]
symbol:usp7 "ubiquitin specific peptidase 7
(herpes virus-associated)" species:7955 "Danio rerio" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 ZFIN:ZDB-GENE-030131-3656 GO:GO:0006511 GO:GO:0004221
SUPFAM:SSF49599 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 EMBL:CR396594 EMBL:CR394572
IPI:IPI00832505 Ensembl:ENSDART00000024453 ArrayExpress:F1QUS9
Bgee:F1QUS9 Uniprot:F1QUS9
Length = 1110
Score = 300 (110.7 bits), Expect = 5.6e-23, P = 5.6e-23
Identities = 69/169 (40%), Positives = 99/169 (58%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ + +V E LDG N+
Sbjct: 326 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFKDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF FP +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTFPPILHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 253 (94.1 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 58/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRRAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 340
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE ++YV
Sbjct: 341 RSERIEDYYDIQLSIKGKKNIFESFKDYV 369
>SGD|S000004920 [details] [associations]
symbol:UBP15 "Ubiquitin-specific protease involved in protein
deubiquitination" species:4932 "Saccharomyces cerevisiae"
[GO:0004843 "ubiquitin-specific protease activity"
evidence=IMP;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISA;IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
SGD:S000004920 GO:GO:0005777 EMBL:BK006946 EMBL:Z49212
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
SUPFAM:SSF49599 eggNOG:COG5077 HOGENOM:HOG000160240 KO:K11838
InterPro:IPR024729 Pfam:PF12436 PIR:S53974 RefSeq:NP_014033.1
ProteinModelPortal:P50101 SMR:P50101 DIP:DIP-6313N IntAct:P50101
MINT:MINT-618224 STRING:P50101 MEROPS:C19.099 PaxDb:P50101
PeptideAtlas:P50101 EnsemblFungi:YMR304W GeneID:855350
KEGG:sce:YMR304W CYGD:YMR304w GeneTree:ENSGT00630000089581
OMA:GHYYAMI OrthoDB:EOG4ZW8K5 NextBio:979106 Genevestigator:P50101
GermOnline:YMR304W Uniprot:P50101
Length = 1230
Score = 300 (110.7 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 61/164 (37%), Positives = 99/164 (60%)
Query: 475 VETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMR 534
++T +LTRSFGW++++++ QHD+QEL R+L D LE KG+ G +N ++ GKM+
Sbjct: 265 LDTLELTRSFGWDTAESFTQHDVQELNRILMDRLENNMKGTPVEGK----LNEIFVGKMK 320
Query: 535 DYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDK 594
Y+KC+ E +R + F D+ L V+ F + + E+ ++ E ++G NQY
Sbjct: 321 SYIKCINVDYESARVEDFWDLQLNVKNFKN------LQESFDNYIEMELMNGENQYAAQD 374
Query: 595 CGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + DA KG+ F FP +L L L RF++D++ +K+NDK E
Sbjct: 375 YGLQ-DAQKGVIFESFPPVLHLQLKRFEYDFNYDQMVKVNDKYE 417
Score = 227 (85.0 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 45/99 (45%), Positives = 65/99 (65%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCYLNSL+Q+ F T FR VY+ E++ + S+ LQ+ F LQ S P ++T +L
Sbjct: 213 TCYLNSLLQSYFFTKYFRKLVYEIPTEHE-SPNNSVPLALQRAFYQLQVSDIP-LDTLEL 270
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
TRSFGW++++++ QHD+QEL R+L D LE KG+ G
Sbjct: 271 TRSFGWDTAESFTQHDVQELNRILMDRLENNMKGTPVEG 309
>POMBASE|SPCC188.08c [details] [associations]
symbol:ubp5 "ubiquitin C-terminal hydrolase Ubp5"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030133
"transport vesicle" evidence=IDA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 PomBase:SPCC188.08c
GO:GO:0005829 GO:GO:0005634 GO:GO:0005794 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006897 GO:GO:0006511 GO:GO:0030133
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599
eggNOG:COG5077 HOGENOM:HOG000160240 KO:K11838 MEROPS:C19.A59
PIR:T41188 RefSeq:NP_588211.1 ProteinModelPortal:Q09879
STRING:Q09879 EnsemblFungi:SPCC188.08c.1 GeneID:2539385
KEGG:spo:SPCC188.08c OMA:EDIFLFF OrthoDB:EOG4HDX2M NextBio:20800549
Uniprot:Q09879
Length = 1108
Score = 299 (110.3 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 64/164 (39%), Positives = 100/164 (60%)
Query: 475 VETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMR 534
V TT+LT+SFGW+S D++ QHD+QE RVL D LE + +K + + NL+ GKM+
Sbjct: 273 VSTTELTKSFGWDSLDSFMQHDVQEFNRVLQDNLERSMRDTKVE----NALTNLFVGKMK 328
Query: 535 DYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDK 594
Y+ C+ E +R + + DI L V+ G ++ ++ R++++ ETL+G N YF D
Sbjct: 329 SYIACVNVNFESARSEDYWDIQLNVK--GMK----NLEDSFRSYIQVETLEGDNCYFADT 382
Query: 595 CGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + +A KG+ F FP +L L L RF++D+ IK+ND+ E
Sbjct: 383 YGFQ-EAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYE 425
Score = 221 (82.9 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 45/96 (46%), Positives = 64/96 (66%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q+L++ FR VY+ ++ ++ SI Y LQ+ F NLQ P V TT+L
Sbjct: 221 TCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKD-SIAYALQRCFYNLQFMNEP-VSTTEL 278
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSK 97
T+SFGW+S D++ QHD+QE RVL D LE + +K
Sbjct: 279 TKSFGWDSLDSFMQHDVQEFNRVLQDNLERSMRDTK 314
Score = 55 (24.4 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 35/160 (21%), Positives = 64/160 (40%)
Query: 221 DVCFLPDGSQFLSVGIDNTIKTWSSELSES-DHIVPLHTXXXXXXXXXXXHQR--KSKIF 277
D+C + Q L +G D+ T + L+ S +VP + + + IF
Sbjct: 837 DLCI--ELGQKLGIGADHIRLTTCNPLTYSAGMVVPNDSNITLYEILYSSEEEMPSNVIF 894
Query: 278 ATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
D L + +R +R W VD L +++ ++ +I ++S + D V
Sbjct: 895 YETMD-VSLSDLDRKRLVR-LRWLVDGLANIEL--VEAYI------NKSGDINDLFGAVC 944
Query: 338 SRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALN 377
R PD LR+ K ++ + + H R +R +N
Sbjct: 945 ERFPDSDLRKKKVRVYEV---FESRYHRDLSLRTLIRTIN 981
Score = 46 (21.3 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 106 INNLY-QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALN 153
IN+L+ V R PD LR+ K ++ + + H R +R +N
Sbjct: 936 INDLFGAVCERFPDSDLRKKKVRVYEV---FESRYHRDLSLRTLIRTIN 981
Score = 43 (20.2 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 282 DQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDK 315
DQ QL+ E+ + F ++ +H + F+ + K
Sbjct: 994 DQLQLYPEEKIVQVHHFHKDIARIHGIPFSFVIK 1027
Score = 43 (20.2 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 374 RALNATKLERVFAKPFVGP-REYVRALN 400
R++ TK+E FVG + Y+ +N
Sbjct: 308 RSMRDTKVENALTNLFVGKMKSYIACVN 335
>UNIPROTKB|H3BND8 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005634 GO:GO:0005737 GO:GO:0006917 GO:GO:0031647
GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 SUPFAM:SSF49599
InterPro:IPR024729 Pfam:PF12436 EMBL:AC022167 HGNC:HGNC:12630
Ensembl:ENST00000563085 Bgee:H3BND8 Uniprot:H3BND8
Length = 909
Score = 296 (109.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 171 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 225
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 226 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 279
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 280 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 327
Score = 251 (93.4 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 123 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 180
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 181 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 240
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 241 RSDRREDYYDIQLSIKGKKNIFESFVDYV 269
>UNIPROTKB|F5H8E5 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005634 GO:GO:0005737 GO:GO:0006917 GO:GO:0031647
GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 SUPFAM:SSF49599
InterPro:IPR024729 Pfam:PF12436 EMBL:AC022167 HGNC:HGNC:12630
IPI:IPI01011924 ProteinModelPortal:F5H8E5 SMR:F5H8E5
Ensembl:ENST00000535863 ArrayExpress:F5H8E5 Bgee:F5H8E5
Uniprot:F5H8E5
Length = 1003
Score = 296 (109.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 171 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 225
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 226 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 279
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 280 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 327
Score = 251 (93.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 123 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 180
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 181 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 240
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 241 RSDRREDYYDIQLSIKGKKNIFESFVDYV 269
>UNIPROTKB|F1N556 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0010216 "maintenance
of DNA methylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IEA] [GO:0002039
"p53 binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0005829
GO:GO:0005634 GO:GO:0008234 GO:GO:0006511 GO:GO:0032088
GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599 GO:GO:0006283
InterPro:IPR024729 Pfam:PF12436 GeneTree:ENSGT00630000089581
EMBL:DAAA02057413 IPI:IPI00696043 Ensembl:ENSBTAT00000007177
OMA:LITVAHF Uniprot:F1N556
Length = 1086
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 254 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 308
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 309 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 362
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 363 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 410
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 206 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 263
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 264 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 323
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 324 RSDRREDYYDIQLSIKGKKNIFESFVDYV 352
>UNIPROTKB|F1PX83 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0010216 "maintenance of DNA methylation" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005829 GO:GO:0005634 GO:GO:0008234 GO:GO:0006511
GO:GO:0032088 GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599
GO:GO:0006283 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 OMA:LITVAHF EMBL:AAEX03004553
Ensembl:ENSCAFT00000030172 Uniprot:F1PX83
Length = 1086
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 254 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 308
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 309 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 362
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 363 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 410
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 206 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 263
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 264 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 323
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 324 RSDRREDYYDIQLSIKGKKNIFESFVDYV 352
>UNIPROTKB|B7Z815 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599 InterPro:IPR024729
Pfam:PF12436 HOVERGEN:HBG018029 EMBL:AC022167 UniGene:Hs.386939
HGNC:HGNC:12630 EMBL:AK302771 IPI:IPI00646721
ProteinModelPortal:B7Z815 SMR:B7Z815 STRING:B7Z815 PRIDE:B7Z815
Ensembl:ENST00000381886 UCSC:uc002czk.2 ArrayExpress:B7Z815
Bgee:B7Z815 Uniprot:B7Z815
Length = 1086
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 254 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 308
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 309 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 362
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 363 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 410
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 206 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 263
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 264 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 323
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 324 RSDRREDYYDIQLSIKGKKNIFESFVDYV 352
>UNIPROTKB|Q93009 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase 7"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=IDA;IMP] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA;IMP] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IDA;IMP] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0002039 "p53 binding" evidence=IDA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IMP] [GO:0010216
"maintenance of DNA methylation" evidence=IMP] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005829
"cytosol" evidence=IDA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634
Pathway_Interaction_DB:foxopathway GO:GO:0019048 GO:GO:0006917
GO:GO:0016605 EMBL:CH471112 GO:GO:0031647 GO:GO:0006511
GO:GO:0032088 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0002039 SUPFAM:SSF49599 GO:GO:0006283
GO:GO:0010216 PDB:1YY6 PDBsum:1YY6 eggNOG:COG5077 PDB:2F1Y PDB:2FOP
PDBsum:2F1Y PDBsum:2FOP PDB:2F1X PDB:2FOJ PDB:2FOO PDBsum:2F1X
PDBsum:2FOJ PDBsum:2FOO PDB:1NBF PDBsum:1NBF HOGENOM:HOG000160240
KO:K11838 InterPro:IPR024729 Pfam:PF12436 MEROPS:C19.016 CTD:7874
HOVERGEN:HBG018029 EMBL:Z72499 EMBL:AC022167 IPI:IPI00003965
RefSeq:NP_003461.2 UniGene:Hs.386939 PDB:1NB8 PDB:1YZE PDB:2F1W
PDB:2F1Z PDB:2KVR PDB:2XXN PDB:2YLM PDB:3MQR PDB:3MQS PDBsum:1NB8
PDBsum:1YZE PDBsum:2F1W PDBsum:2F1Z PDBsum:2KVR PDBsum:2XXN
PDBsum:2YLM PDBsum:3MQR PDBsum:3MQS ProteinModelPortal:Q93009
SMR:Q93009 DIP:DIP-29053N IntAct:Q93009 MINT:MINT-234628
STRING:Q93009 PhosphoSite:Q93009 DMDM:212276477 PaxDb:Q93009
PRIDE:Q93009 DNASU:7874 Ensembl:ENST00000344836 GeneID:7874
KEGG:hsa:7874 UCSC:uc002czl.2 GeneCards:GC16M008985
H-InvDB:HIX0038590 HGNC:HGNC:12630 HPA:CAB008108 HPA:HPA015641
MIM:602519 neXtProt:NX_Q93009 PharmGKB:PA37255 OrthoDB:EOG4640B4
EvolutionaryTrace:Q93009 GenomeRNAi:7874 NextBio:30332
ArrayExpress:Q93009 Bgee:Q93009 CleanEx:HS_USP7
Genevestigator:Q93009 GermOnline:ENSG00000187555 Uniprot:Q93009
Length = 1102
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 270 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 324
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 325 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 378
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 379 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 426
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 222 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 279
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 280 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 339
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 340 RSDRREDYYDIQLSIKGKKNIFESFVDYV 368
>UNIPROTKB|F1RKZ6 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0010216 "maintenance
of DNA methylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004197
"cysteine-type endopeptidase activity" evidence=IEA] [GO:0002039
"p53 binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0005829
GO:GO:0005634 GO:GO:0008234 GO:GO:0006511 GO:GO:0032088
GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599 GO:GO:0006283
InterPro:IPR024729 Pfam:PF12436 GeneTree:ENSGT00630000089581
OMA:LITVAHF EMBL:FP089531 Ensembl:ENSSSCT00000008664 Uniprot:F1RKZ6
Length = 1103
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 340
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 341 RSDRREDYYDIQLSIKGKKNIFESFVDYV 369
>RGD|1306915 [details] [associations]
symbol:Usp7 "ubiquitin specific peptidase 7 (herpes
virus-associated)" species:10116 "Rattus norvegicus" [GO:0002039
"p53 binding" evidence=ISO] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA;ISO;ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISO;ISS;IDA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;ISS] [GO:0016579 "protein deubiquitination"
evidence=ISO;ISS;IDA] [GO:0016605 "PML body" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0031647 "regulation of protein stability" evidence=IDA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 RGD:1306915 GO:GO:0007275 GO:GO:0005829 GO:GO:0005634
GO:GO:0042803 GO:GO:0006917 GO:GO:0016605 GO:GO:0031647
GO:GO:0006511 GO:GO:0032088 GO:GO:0004197 GO:GO:0051090
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599
GO:GO:0006283 HSSP:Q93009 GO:GO:0010216 eggNOG:COG5077
HOGENOM:HOG000160240 KO:K11838 InterPro:IPR024729 Pfam:PF12436
CTD:7874 HOVERGEN:HBG018029 OrthoDB:EOG4640B4 EMBL:AY641530
IPI:IPI00372303 RefSeq:NP_001019961.1 UniGene:Rn.72721
ProteinModelPortal:Q4VSI4 SMR:Q4VSI4 MINT:MINT-1365534
STRING:Q4VSI4 PhosphoSite:Q4VSI4 PRIDE:Q4VSI4 GeneID:360471
KEGG:rno:360471 UCSC:RGD:1306915 InParanoid:Q4VSI4 NextBio:672877
ArrayExpress:Q4VSI4 Genevestigator:Q4VSI4
GermOnline:ENSRNOG00000025496 Uniprot:Q4VSI4
Length = 1103
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 340
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 341 RSDRREDYYDIQLSIKGKKNIFESFVDYV 369
>UNIPROTKB|Q4VSI4 [details] [associations]
symbol:Usp7 "Ubiquitin carboxyl-terminal hydrolase 7"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 RGD:1306915
GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0042803
GO:GO:0006917 GO:GO:0016605 GO:GO:0031647 GO:GO:0006511
GO:GO:0032088 GO:GO:0004197 GO:GO:0051090 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599 GO:GO:0006283
HSSP:Q93009 GO:GO:0010216 eggNOG:COG5077 HOGENOM:HOG000160240
KO:K11838 InterPro:IPR024729 Pfam:PF12436 CTD:7874
HOVERGEN:HBG018029 OrthoDB:EOG4640B4 EMBL:AY641530 IPI:IPI00372303
RefSeq:NP_001019961.1 UniGene:Rn.72721 ProteinModelPortal:Q4VSI4
SMR:Q4VSI4 MINT:MINT-1365534 STRING:Q4VSI4 PhosphoSite:Q4VSI4
PRIDE:Q4VSI4 GeneID:360471 KEGG:rno:360471 UCSC:RGD:1306915
InParanoid:Q4VSI4 NextBio:672877 ArrayExpress:Q4VSI4
Genevestigator:Q4VSI4 GermOnline:ENSRNOG00000025496 Uniprot:Q4VSI4
Length = 1103
Score = 296 (109.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 69/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C E R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKEVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDY 340
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 341 RSDRREDYYDIQLSIKGKKNIFESFVDYV 369
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 286 (105.7 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/151 (40%), Positives = 92/151 (60%)
Query: 111 QVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVANLD 170
+ + R+ D+Y+ T ++PRN++P LHPFE REY +ALNATKLER+FAKPFV L
Sbjct: 4 KTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLG 63
Query: 171 -GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL---- 225
GH+DG+ +AK+ L+ + +G+ DG +K WN++++ +++AH G V +C
Sbjct: 64 YGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTREEFVSFKAHYGLVTGLCVTQPRF 123
Query: 226 ----PD-GSQ--FLSVGIDNTIKTWSSELSE 249
PD SQ LS D T+K WS + +
Sbjct: 124 HDKKPDLKSQNFMLSCSDDKTVKLWSINVDD 154
Score = 196 (74.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 388 PFVGPREYVRALNATKLERVFAKPFVANLD-GHKDGISCLAKHPTKLSTIISGAYDGEVK 446
PF REY +ALNATKLER+FAKPFV L GH+DG+ +AK+ L+ + +G+ DG +K
Sbjct: 34 PFERAREYTKALNATKLERMFAKPFVGQLGYGHRDGVYAIAKNYGSLNKLATGSADGVIK 93
Query: 447 VWNLTSQSCVQTYQAHDGHV 466
WN++++ +++AH G V
Sbjct: 94 YWNMSTREEFVSFKAHYGLV 113
Score = 178 (67.7 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 337 LSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREY 395
+ R+ D+Y+ T ++PRN++P LHPFE REY +ALNATKLER+FAKPFVG Y
Sbjct: 6 IKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKLERMFAKPFVGQLGY 64
Score = 150 (57.9 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 65/271 (23%), Positives = 113/271 (41%)
Query: 201 WNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL--------SESDH 252
+ L + CV + HD D L + LS D T+K WS + S++D
Sbjct: 110 YGLVTGLCVTQPRFHDKKP-D---LKSQNFMLSCSDDKTVKLWSINVDDYSNKNSSDNDS 165
Query: 253 IVP----LHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHV 308
+ + T R++ FAT G + LW+ R +P+ SW D++ +
Sbjct: 166 VTNEEGLIRTFDGESAFQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSL 225
Query: 309 QFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETKT------SIHRIPRNIDPS 362
+FN + ILAS SD SI+LYD R ++ + +R + + + N D +
Sbjct: 226 KFNQNETDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTANEDHN 285
Query: 363 LHPFEGPREYVRALNATK--LERVFAKPFVGPREYVRALNATKLERVFAKPFVANLD-GH 419
+ ++ R R+LN K + V F + + + K R++ + + H
Sbjct: 286 AYYYD-MRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRIYKTNHGHSREIYH 344
Query: 420 KDGISCL--AKHPTKLSTIISGAYDGEVKVW 448
+ + K+ IISG+ DG V++W
Sbjct: 345 TKRMQHVFQVKYSMDSKYIISGSDDGNVRLW 375
>MGI|MGI:2182061 [details] [associations]
symbol:Usp7 "ubiquitin specific peptidase 7" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISO;IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO;IDA]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0016579 "protein deubiquitination" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0031647
"regulation of protein stability" evidence=ISO] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=ISO]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
MGI:MGI:2182061 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0016605 GO:GO:0006511 GO:GO:0004197 GO:GO:0051090
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599
GO:GO:0006283 HSSP:Q93009 eggNOG:COG5077 HOGENOM:HOG000160240
KO:K11838 InterPro:IPR024729 Pfam:PF12436 MEROPS:C19.016 CTD:7874
HOVERGEN:HBG018029 ChiTaRS:USP7 OrthoDB:EOG4640B4 EMBL:AF548565
EMBL:AK075830 EMBL:AK135814 EMBL:BC100666 IPI:IPI00463367
IPI:IPI00817018 IPI:IPI00969838 RefSeq:NP_001003918.2
UniGene:Mm.295330 ProteinModelPortal:Q6A4J8 SMR:Q6A4J8
DIP:DIP-38603N IntAct:Q6A4J8 STRING:Q6A4J8 PhosphoSite:Q6A4J8
PaxDb:Q6A4J8 PRIDE:Q6A4J8 DNASU:252870 GeneID:252870
KEGG:mmu:252870 UCSC:uc007ycw.1 UCSC:uc007ycx.1 NextBio:387363
CleanEx:MM_USP7 Genevestigator:Q6A4J8 Uniprot:Q6A4J8
Length = 1103
Score = 293 (108.2 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 68/169 (40%), Positives = 98/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 271 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 325
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C + R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 326 RGKMVSYIQCKDVDYRSDRREDYYDIQLSIK--GKK----NIFESFVDYVAVEQLDGDNK 379
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 380 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 427
Score = 251 (93.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/149 (38%), Positives = 83/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 223 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 280
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 281 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKDVDY 340
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
+ + + I +I + FE +YV
Sbjct: 341 RSDRREDYYDIQLSIKGKKNIFESFVDYV 369
>UNIPROTKB|F1P4V7 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005829 GO:GO:0005634 GO:GO:0008234
GO:GO:0006511 GO:GO:0032088 GO:GO:0016579 GO:GO:0004221
SUPFAM:SSF49599 GO:GO:0006283 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 EMBL:AADN02023454 IPI:IPI01017103
Ensembl:ENSGALT00000039799 ArrayExpress:F1P4V7 Uniprot:F1P4V7
Length = 605
Score = 288 (106.4 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 68/169 (40%), Positives = 97/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 244 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 298
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 299 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFIDYVAVEQLDGDNK 352
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 353 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 400
Score = 248 (92.4 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 196 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 253
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 254 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 313
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE +YV
Sbjct: 314 RSERIEDYYDIQLSIKGKKNIFESFIDYV 342
>UNIPROTKB|F1P4U6 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0006511
GO:GO:0004221 SUPFAM:SSF49599 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 EMBL:AADN02023454 IPI:IPI01017193
Ensembl:ENSGALT00000039800 ArrayExpress:F1P4U6 Uniprot:F1P4U6
Length = 661
Score = 288 (106.4 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 68/169 (40%), Positives = 97/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 244 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 298
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 299 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFIDYVAVEQLDGDNK 352
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 353 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 400
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 196 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 253
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 254 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 313
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE +YV
Sbjct: 314 RSERIEDYYDIQLSIKGKKNIFESFIDYV 342
>UNIPROTKB|E1BRT3 [details] [associations]
symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:NLKPFCE EMBL:AADN02034442
EMBL:AADN02034443 IPI:IPI00599112 Ensembl:ENSGALT00000006731
Uniprot:E1BRT3
Length = 1248
Score = 289 (106.8 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 66/160 (41%), Positives = 90/160 (56%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A TTDLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLIN LY G +
Sbjct: 113 AASTTDLTESFGWNSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLINRLYHGTV 168
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAM-RAFVRPETLDGANQYFC 592
+ + C EC R++ FLD+ + V+ VA + EA+ +V E + N Y C
Sbjct: 169 VNQIVCKECKNISERQEDFLDLTVAVK----GVA--GLEEALWNMYVEEEYFENENLYRC 222
Query: 593 DKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C K +A K K + P LT+ L+RF+FD+ R K
Sbjct: 223 GACDKLVEASKSAKLHKLPPFLTISLLRFNFDFEKCERYK 262
Score = 232 (86.7 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 57/120 (47%), Positives = 72/120 (60%)
Query: 2 TCYLNSLIQALFMTPEFR--NAVYKWKYE-----NDIAEETS----ITYQLQKLFVNLQT 50
TCYLNSL+Q L TPEFR A++ E +D+ + + I QLQ+LF L
Sbjct: 49 TCYLNSLLQTLLFTPEFRVTEALFSLGPEELGTLDDVGKPDAKVRIIPLQLQRLFAQLLL 108
Query: 51 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A TTDLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLIN LY
Sbjct: 109 LDQQAASTTDLTESFGWNSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLINRLY 164
Score = 45 (20.9 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 335 TVLSRNPDEYLRETKTSI--HRIPRNIDPSLHPFE-----GPRE 371
TV SR P LR K + +++ ++ + P + GPRE
Sbjct: 1039 TVESRRPGRLLRHNKQQLSEYKLGARVEICIEPLQKEENLGPRE 1082
>UNIPROTKB|F1P4U4 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599 InterPro:IPR024729
Pfam:PF12436 GeneTree:ENSGT00630000089581 IPI:IPI00821642
EMBL:AADN02023454 Ensembl:ENSGALT00000039801 ArrayExpress:F1P4U4
Uniprot:F1P4U4
Length = 1076
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 68/169 (40%), Positives = 97/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 244 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 298
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 299 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFIDYVAVEQLDGDNK 352
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 353 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 400
Score = 248 (92.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 196 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 253
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 254 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 313
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE +YV
Sbjct: 314 RSERIEDYYDIQLSIKGKKNIFESFIDYV 342
>UNIPROTKB|F1N909 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005829 GO:GO:0005634 GO:GO:0008234
GO:GO:0006511 GO:GO:0032088 GO:GO:0016579 GO:GO:0004221
SUPFAM:SSF49599 GO:GO:0006283 InterPro:IPR024729 Pfam:PF12436
GeneTree:ENSGT00630000089581 OMA:LITVAHF EMBL:AADN02023454
IPI:IPI00580665 Ensembl:ENSGALT00000011827 ArrayExpress:F1N909
Uniprot:F1N909
Length = 1078
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 68/169 (40%), Positives = 97/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 244 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 298
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 299 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFIDYVAVEQLDGDNK 352
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 353 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 400
Score = 248 (92.4 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 196 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 253
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 254 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 313
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE +YV
Sbjct: 314 RSERIEDYYDIQLSIKGKKNIFESFIDYV 342
>UNIPROTKB|Q6U7I1 [details] [associations]
symbol:USP7 "Ubiquitin carboxyl-terminal hydrolase 7"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005634
"nucleus" evidence=ISS] [GO:0051090 "regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0016605
GO:GO:0006511 GO:GO:0051090 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009 eggNOG:COG5077
HOGENOM:HOG000160240 KO:K11838 InterPro:IPR024729 Pfam:PF12436
EMBL:AY376869 EMBL:AY376870 EMBL:AY376871 IPI:IPI00819098
IPI:IPI00819855 IPI:IPI00821642 RefSeq:NP_989802.1 UniGene:Gga.9341
ProteinModelPortal:Q6U7I1 SMR:Q6U7I1 STRING:Q6U7I1 MEROPS:C19.016
PRIDE:Q6U7I1 GeneID:395126 KEGG:gga:395126 CTD:7874
HOVERGEN:HBG018029 NextBio:20815218 Uniprot:Q6U7I1
Length = 1101
Score = 288 (106.4 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 68/169 (40%), Positives = 97/169 (57%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S +P V T LT+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G I L+
Sbjct: 270 SDKP-VGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGT----IPKLF 324
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+GKM Y++C R + + DI L ++ G +I E+ +V E LDG N+
Sbjct: 325 RGKMVSYIQCKHVDYRSERIEDYYDIQLSIK--GKK----NIFESFIDYVAVEQLDGDNK 378
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
Y + G + +A KG+KF P +L L LMRF +D T IK+ND+ E
Sbjct: 379 YDAGEHGLQ-EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFE 426
Score = 248 (92.4 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 58/149 (38%), Positives = 82/149 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NSL+Q LF T + R AVY E D + + S+ LQ++F LQ S +P V T L
Sbjct: 222 TCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSK-SVPLALQRVFYELQHSDKP-VGTKKL 279
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINN-LYQVLSRNPDEY 120
T+SFGWE+ D++ QHD+QELCRVL D +E + KG+ G L + + +Y
Sbjct: 280 TKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDY 339
Query: 121 LRETKTSIHRIPRNIDPSLHPFEGPREYV 149
E + I +I + FE +YV
Sbjct: 340 RSERIEDYYDIQLSIKGKKNIFESFIDYV 368
>WB|WBGene00010406 [details] [associations]
symbol:math-33 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0031581 "hemidesmosome assembly"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005634 GO:GO:0040010 GO:GO:0002119
GO:GO:0040018 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 SUPFAM:SSF49599 GO:GO:0031581 HSSP:Q93009
eggNOG:COG5077 HOGENOM:HOG000160240 KO:K11838
GeneTree:ENSGT00630000089581 EMBL:Z92835 RefSeq:NP_001024012.1
ProteinModelPortal:Q7JKC3 SMR:Q7JKC3 STRING:Q7JKC3 MEROPS:C19.A54
PaxDb:Q7JKC3 PRIDE:Q7JKC3 EnsemblMetazoa:H19N07.2c GeneID:179538
KEGG:cel:CELE_H19N07.2 UCSC:H19N07.2a CTD:179538 WormBase:H19N07.2c
InParanoid:Q7JKC3 OMA:ERAFEAY NextBio:905840 ArrayExpress:Q7JKC3
Uniprot:Q7JKC3
Length = 1135
Score = 291 (107.5 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 65/150 (43%), Positives = 90/150 (60%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AVET LTR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++G M
Sbjct: 252 AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFRGNM 307
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ Y+KCL+ E SR ++F D+ L V S + A A+ E LD N+Y
Sbjct: 308 KSYIKCLDVDYESSRTESFYDVQLNVLGMDS------LERAFEAYTTSEILDDENKYDAG 361
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
G + A KG+KF E P +L + LMRF +
Sbjct: 362 DHGLQ-RAEKGVKFVELPPILHVQLMRFQY 390
Score = 239 (89.2 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++Q+ + T FR AVY + E++I +Q++F LQ ++ AVET L
Sbjct: 201 TCYMNSILQSFYFTTGFRRAVYNMDVGTE-PNESNIVLAMQRVFYELQMASE-AVETNSL 258
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++
Sbjct: 259 TRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFR 304
Score = 45 (20.9 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 450 LTSQSCVQTYQA---HDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFD 506
LT + CV + A H G + + SS W + D + R D
Sbjct: 419 LTEEDCVYSLHAVLVHSGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTD 478
Query: 507 -ALETQFKGSKTTGDQADLI 525
A+ + F G KT A ++
Sbjct: 479 DAIVSNFGGEKTMNSSAYML 498
Score = 39 (18.8 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 612 YLLTLHLMRFDFDYSTMHRIK 632
Y + +M FD D + HRI+
Sbjct: 896 YRVQYAIMPFDIDEISKHRIQ 916
>UNIPROTKB|Q7JKC3 [details] [associations]
symbol:usp-7 "Ubiquitin carboxyl-terminal hydrolase 7"
species:6239 "Caenorhabditis elegans" [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005634 GO:GO:0040010 GO:GO:0002119 GO:GO:0040018
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
SUPFAM:SSF49599 GO:GO:0031581 HSSP:Q93009 eggNOG:COG5077
HOGENOM:HOG000160240 KO:K11838 GeneTree:ENSGT00630000089581
EMBL:Z92835 RefSeq:NP_001024012.1 ProteinModelPortal:Q7JKC3
SMR:Q7JKC3 STRING:Q7JKC3 MEROPS:C19.A54 PaxDb:Q7JKC3 PRIDE:Q7JKC3
EnsemblMetazoa:H19N07.2c GeneID:179538 KEGG:cel:CELE_H19N07.2
UCSC:H19N07.2a CTD:179538 WormBase:H19N07.2c InParanoid:Q7JKC3
OMA:ERAFEAY NextBio:905840 ArrayExpress:Q7JKC3 Uniprot:Q7JKC3
Length = 1135
Score = 291 (107.5 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 65/150 (43%), Positives = 90/150 (60%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AVET LTR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++G M
Sbjct: 252 AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFRGNM 307
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ Y+KCL+ E SR ++F D+ L V S + A A+ E LD N+Y
Sbjct: 308 KSYIKCLDVDYESSRTESFYDVQLNVLGMDS------LERAFEAYTTSEILDDENKYDAG 361
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
G + A KG+KF E P +L + LMRF +
Sbjct: 362 DHGLQ-RAEKGVKFVELPPILHVQLMRFQY 390
Score = 239 (89.2 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 49/110 (44%), Positives = 73/110 (66%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++Q+ + T FR AVY + E++I +Q++F LQ ++ AVET L
Sbjct: 201 TCYMNSILQSFYFTTGFRRAVYNMDVGTE-PNESNIVLAMQRVFYELQMASE-AVETNSL 258
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQ 111
TR+FGW+ DA+ QHD+QE CRVL D LET+ KG T+ +++ I NL++
Sbjct: 259 TRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKG--TSEEKS--IPNLFR 304
Score = 45 (20.9 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 19/80 (23%), Positives = 29/80 (36%)
Query: 450 LTSQSCVQTYQA---HDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFD 506
LT + CV + A H G + + SS W + D + R D
Sbjct: 419 LTEEDCVYSLHAVLVHSGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTD 478
Query: 507 -ALETQFKGSKTTGDQADLI 525
A+ + F G KT A ++
Sbjct: 479 DAIVSNFGGEKTMNSSAYML 498
Score = 39 (18.8 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 612 YLLTLHLMRFDFDYSTMHRIK 632
Y + +M FD D + HRI+
Sbjct: 896 YRVQYAIMPFDIDEISKHRIQ 916
>UNIPROTKB|D4A2R6 [details] [associations]
symbol:Usp40 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1309613 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 EMBL:AC092530 IPI:IPI00952023
Ensembl:ENSRNOT00000064642 ArrayExpress:D4A2R6 Uniprot:D4A2R6
Length = 501
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 63/159 (39%), Positives = 85/159 (53%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A TTDLT SFGW S + +QHD+QEL R+LF ALET G T+G DLI+ LY G +
Sbjct: 111 AASTTDLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLYHGTI 166
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC R++ FLD+ + V+ D + M +V E D N Y C
Sbjct: 167 VNQIVCKECKNVSERQEDFLDLTVAVKNVSG---LEDALWNM--YVEEEIFDYDNLYHCG 221
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 222 TCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYK 260
Score = 222 (83.2 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 55/118 (46%), Positives = 68/118 (57%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKW------KYENDIAEETS---ITYQLQKLFVNLQTST 52
TCYL+SL+Q L TPEFR A++ E+ E I QLQ+LF L
Sbjct: 49 TCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPEAKVRIIPLQLQRLFAQLLLVD 108
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A TTDLT SFGW S + +QHD+QEL R+LF ALET G T+G DLI+ LY
Sbjct: 109 QEAASTTDLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLY 162
>TAIR|locus:2144118 [details] [associations]
symbol:UBP12 "ubiquitin-specific protease 12"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006007 "glucose catabolic process" evidence=RCA]
InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008234
EMBL:AP002543 GO:GO:0006511 GO:GO:0004221 SUPFAM:SSF49599
HSSP:Q93009 eggNOG:COG5077 EMBL:AF302663 EMBL:AF360198
EMBL:AY142616 IPI:IPI00540940 IPI:IPI00547717 RefSeq:NP_568171.1
RefSeq:NP_850783.1 UniGene:At.22362 UniGene:At.67352
ProteinModelPortal:Q9FPT1 SMR:Q9FPT1 STRING:Q9FPT1 PaxDb:Q9FPT1
PRIDE:Q9FPT1 EnsemblPlants:AT5G06600.1 GeneID:830548
KEGG:ath:AT5G06600 TAIR:At5g06600 HOGENOM:HOG000160240
InParanoid:Q9FPT1 KO:K11838 OMA:RLFVKSS PhylomeDB:Q9FPT1
ProtClustDB:CLSN2689510 Genevestigator:Q9FPT1 InterPro:IPR024729
Pfam:PF12436 Uniprot:Q9FPT1
Length = 1116
Score = 277 (102.6 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 59/165 (35%), Positives = 99/165 (60%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
+V T +LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G I L++G
Sbjct: 259 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGT----IQQLFEGHH 314
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+Y++C+ + +R+++F D+ L V+ G D+ + +V E L+G N+Y +
Sbjct: 315 MNYIECINVDFKSTRKESFYDLQLDVK--GCK----DVYASFDKYVEVERLEGDNKYHAE 368
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
G + DA KG+ F +FP +L L L RF++D+ +K+ND+ E
Sbjct: 369 GHGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 412
Score = 221 (82.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/100 (49%), Positives = 64/100 (64%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKY-ENDIAEETSITYQLQKLFVNLQTSTRPAVETTD 60
TCY+NSL+Q L+ P FR AVY END A SI LQ LF LQ + +V T +
Sbjct: 207 TCYMNSLLQTLYHIPYFRKAVYHMPTTEND-APTASIPLALQSLFYKLQYNDT-SVATKE 264
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G
Sbjct: 265 LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG 304
>UNIPROTKB|E1BKD2 [details] [associations]
symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:NLKPFCE EMBL:DAAA02009280
IPI:IPI00700563 Ensembl:ENSBTAT00000000172 Uniprot:E1BKD2
Length = 1233
Score = 275 (101.9 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 63/159 (39%), Positives = 85/159 (53%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AV T DLT SFGW S + +QHD+QEL R+LF ALET G T+G DLIN LY G +
Sbjct: 110 AVSTADLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLINRLYHGTI 165
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC +++ FLD+ + V+ D + M +V E D N Y C
Sbjct: 166 VNQIVCKECKNVSEKQEDFLDLTVAVKNVSG---LEDALWNM--YVEEEVFDCDNLYHCG 220
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 221 NCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYK 259
Score = 232 (86.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 56/118 (47%), Positives = 69/118 (58%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN--DIAEETS-------ITYQLQKLFVNLQTST 52
TCYLNSL+Q L TPEFR A++ E + ++ I QLQ+LF L
Sbjct: 48 TCYLNSLLQTLHFTPEFREALFSLGLEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLD 107
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ AV T DLT SFGW S + +QHD+QEL R+LF ALET G T+G DLIN LY
Sbjct: 108 QKAVSTADLTDSFGWTSDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLINRLY 161
>TAIR|locus:2081501 [details] [associations]
symbol:UBP13 "ubiquitin-specific protease 13"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] InterPro:IPR001394 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
SMART:SM00061 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP002040 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009 eggNOG:COG5077
EMBL:AC016795 UniGene:At.25337 HOGENOM:HOG000160240 KO:K11838
ProtClustDB:CLSN2689510 InterPro:IPR024729 Pfam:PF12436
EMBL:BT002760 EMBL:AK226819 IPI:IPI00517979 RefSeq:NP_187797.3
ProteinModelPortal:Q84WU2 SMR:Q84WU2 STRING:Q84WU2 MEROPS:C19.A53
PaxDb:Q84WU2 PRIDE:Q84WU2 ProMEX:Q84WU2 EnsemblPlants:AT3G11910.1
GeneID:820364 KEGG:ath:AT3G11910 TAIR:At3g11910 InParanoid:Q84WU2
OMA:DITEQIG PhylomeDB:Q84WU2 Genevestigator:Q84WU2 Uniprot:Q84WU2
Length = 1115
Score = 270 (100.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 58/165 (35%), Positives = 98/165 (59%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
+V T +LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G I L++G
Sbjct: 258 SVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGT----IQKLFEGHH 313
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+Y++C+ + +R+++F D+ L V+ G D+ + +V E L+G N+Y +
Sbjct: 314 MNYIECINVDYKSTRKESFYDLQLDVK--GCK----DVYASFDKYVEVERLEGDNKYHAE 367
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ DA KG+ F +FP +L L L RF++D+ +K+ND+ E
Sbjct: 368 GHDLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYE 411
Score = 221 (82.9 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/100 (49%), Positives = 64/100 (64%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKY-ENDIAEETSITYQLQKLFVNLQTSTRPAVETTD 60
TCY+NSL+Q L+ P FR AVY END A SI LQ LF LQ + +V T +
Sbjct: 206 TCYMNSLLQTLYHIPYFRKAVYHMPTTEND-APTASIPLALQSLFYKLQYNDT-SVATKE 263
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
LT+SFGW++ D++ QHD+QEL RVL + LE + KG+ G
Sbjct: 264 LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG 303
>UNIPROTKB|Q9NVE5 [details] [associations]
symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase 40"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AJ583821 EMBL:AK001647 EMBL:AK124094
EMBL:AC019221 EMBL:AC019072 EMBL:BC067300 IPI:IPI00373874
IPI:IPI00398007 IPI:IPI00947085 RefSeq:NP_060688.1 UniGene:Hs.96513
ProteinModelPortal:Q9NVE5 SMR:Q9NVE5 STRING:Q9NVE5 MEROPS:C19.069
PhosphoSite:Q9NVE5 DMDM:59803114 PaxDb:Q9NVE5 PRIDE:Q9NVE5
Ensembl:ENST00000251722 Ensembl:ENST00000409945
Ensembl:ENST00000427112 Ensembl:ENST00000450966 GeneID:55230
KEGG:hsa:55230 UCSC:uc002vuo.1 UCSC:uc010zmr.2 CTD:55230
GeneCards:GC02M234384 HGNC:HGNC:20069 HPA:HPA005821 MIM:610570
neXtProt:NX_Q9NVE5 PharmGKB:PA134909324 HOGENOM:HOG000154760
HOVERGEN:HBG079302 InParanoid:Q9NVE5 KO:K11869 OMA:NLKPFCE
OrthoDB:EOG4PVNXZ ChiTaRS:USP40 GenomeRNAi:55230 NextBio:59237
ArrayExpress:Q9NVE5 Bgee:Q9NVE5 CleanEx:HS_USP40
Genevestigator:Q9NVE5 GermOnline:ENSG00000085982 Uniprot:Q9NVE5
Length = 1235
Score = 265 (98.3 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 62/159 (38%), Positives = 84/159 (52%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A T DLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLI LY G +
Sbjct: 111 AASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIYRLYHGTI 166
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC R++ FLD+ + V+ D + M +V E D N Y C
Sbjct: 167 VNQIVCKECKNVSERQEDFLDLTVAVKNVSG---LEDALWNM--YVEEEVFDCDNLYHCG 221
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 222 TCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYK 260
Score = 221 (82.9 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 55/118 (46%), Positives = 68/118 (57%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN-DIAEETS--------ITYQLQKLFVNLQTST 52
TCYLNSL+Q L TPEFR A++ E + E+ I QLQ+LF L
Sbjct: 49 TCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLFAQLLLLD 108
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A T DLT SFGW S++ +QHD+QEL R+LF ALET G T+G DLI LY
Sbjct: 109 QEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIYRLY 162
Score = 37 (18.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 13/72 (18%), Positives = 28/72 (38%)
Query: 489 SDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQG--KMRDYVKCLECGTEK 546
S W+ H Q C + + +G++ ++ LY G ++ + E ++
Sbjct: 945 SGHWESHQDQTNCTSSWGRVWRATSSQGASGNEPAQVSLLYLGDIEISEDATLAELKSQA 1004
Query: 547 SREDTFLDIPLP 558
FL+ +P
Sbjct: 1005 MTLPPFLEFGVP 1016
>MGI|MGI:2443184 [details] [associations]
symbol:Usp40 "ubiquitin specific peptidase 40" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:2443184 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5077 GeneTree:ENSGT00630000089581
MEROPS:C19.069 CTD:55230 HOVERGEN:HBG079302 KO:K11869 OMA:NLKPFCE
OrthoDB:EOG4PVNXZ EMBL:AK050239 EMBL:AK132295 EMBL:AK165849
EMBL:AK166303 EMBL:BC089376 EMBL:BC117957 EMBL:BC117958
IPI:IPI00761550 IPI:IPI00816992 IPI:IPI00817031 IPI:IPI00817048
RefSeq:NP_001028463.1 RefSeq:NP_001185502.1 UniGene:Mm.80484
ProteinModelPortal:Q8BWR4 SMR:Q8BWR4 PhosphoSite:Q8BWR4
PaxDb:Q8BWR4 PRIDE:Q8BWR4 Ensembl:ENSMUST00000040783 GeneID:227334
KEGG:mmu:227334 UCSC:uc007bxw.1 UCSC:uc007bxx.1 UCSC:uc007bxy.1
UCSC:uc007bxz.1 InParanoid:Q8BWR4 NextBio:378568 Bgee:Q8BWR4
CleanEx:MM_USP40 Genevestigator:Q8BWR4 Uniprot:Q8BWR4
Length = 1235
Score = 265 (98.3 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 62/159 (38%), Positives = 86/159 (54%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
A T DLT SFGW + + +QHD+QEL R+LF ALET G T+G DLI+ LY G +
Sbjct: 111 AASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLYHGTI 166
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
+ + C EC R++ FLD+ + V+ +V+ G E +V E D N Y C
Sbjct: 167 VNQIVCKECKNISERQEDFLDLTVAVK----NVS-GLEDELCNMYVEEEIFDYDNLYHCG 221
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
C + A K K + P LT+ L+RF+FD+ R K
Sbjct: 222 TCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYK 260
Score = 212 (79.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 52/118 (44%), Positives = 68/118 (57%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN--DIAEETS-------ITYQLQKLFVNLQTST 52
TCYL+SL+Q L TPEFR A++ E + ++ I QLQ+LF L
Sbjct: 49 TCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLD 108
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
+ A T DLT SFGW + + +QHD+QEL R+LF ALET G T+G DLI+ LY
Sbjct: 109 QEAASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVG--TSGH--DLIHRLY 162
>GENEDB_PFALCIPARUM|MAL7P1.147 [details] [associations]
symbol:MAL7P1.147 "ubiquitin carboxyl-terminal
hydrolase, putative" species:5833 "Plasmodium falciparum"
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR001394 InterPro:IPR008974 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0008234 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
SUPFAM:SSF49599 EMBL:AL844506 HSSP:Q93009 KO:K11838
RefSeq:XP_001349163.1 ProteinModelPortal:Q8IBJ1 SMR:Q8IBJ1
IntAct:Q8IBJ1 MINT:MINT-1593463 EnsemblProtists:MAL7P1.147:mRNA
GeneID:2655023 KEGG:pfa:MAL7P1.147 EuPathDB:PlasmoDB:PF3D7_0726500
HOGENOM:HOG000263473 ProtClustDB:CLSZ2514894 Uniprot:Q8IBJ1
Length = 3183
Score = 261 (96.9 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 59/165 (35%), Positives = 93/165 (56%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AV +L RSFGW++SD + Q D EL ++L D +E Q KG+ G + +++G++
Sbjct: 941 AVSCKELIRSFGWDASDVFTQQDTHELLKLLLDKVEEQMKGTVVEGS----VKKMFEGEV 996
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
Y++CL+ + R++T+ DI L V+ G + Y + +A+ A E L+G N Y D
Sbjct: 997 ETYIECLDIDYKSIRKETYEDIQLDVQ--GCNNIYESLDKAIEA----EILEGDNIYETD 1050
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
GK+ A KG++F FP + L RF FD M +KLN++ E
Sbjct: 1051 GYGKQ-KAKKGMRFLSFPNICIFLLKRFTFDLQRMETVKLNNRFE 1094
Score = 63 (27.2 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYK--WKYENDIAEET 35
TCY+N+L+Q L+ FR AV + EN I ++T
Sbjct: 268 TCYMNALLQLLYHINIFRKAVCMMIFNIENIIGKKT 303
>UNIPROTKB|Q8IBJ1 [details] [associations]
symbol:MAL7P1.147 "Ubiquitin carboxyl-terminal hydrolase"
species:36329 "Plasmodium falciparum 3D7" [GO:0016579 "protein
deubiquitination" evidence=ISS] InterPro:IPR001394
InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
GO:GO:0016579 GO:GO:0004221 SUPFAM:SSF49599 EMBL:AL844506
HSSP:Q93009 KO:K11838 RefSeq:XP_001349163.1
ProteinModelPortal:Q8IBJ1 SMR:Q8IBJ1 IntAct:Q8IBJ1
MINT:MINT-1593463 EnsemblProtists:MAL7P1.147:mRNA GeneID:2655023
KEGG:pfa:MAL7P1.147 EuPathDB:PlasmoDB:PF3D7_0726500
HOGENOM:HOG000263473 ProtClustDB:CLSZ2514894 Uniprot:Q8IBJ1
Length = 3183
Score = 261 (96.9 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 59/165 (35%), Positives = 93/165 (56%)
Query: 474 AVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKM 533
AV +L RSFGW++SD + Q D EL ++L D +E Q KG+ G + +++G++
Sbjct: 941 AVSCKELIRSFGWDASDVFTQQDTHELLKLLLDKVEEQMKGTVVEGS----VKKMFEGEV 996
Query: 534 RDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCD 593
Y++CL+ + R++T+ DI L V+ G + Y + +A+ A E L+G N Y D
Sbjct: 997 ETYIECLDIDYKSIRKETYEDIQLDVQ--GCNNIYESLDKAIEA----EILEGDNIYETD 1050
Query: 594 KCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
GK+ A KG++F FP + L RF FD M +KLN++ E
Sbjct: 1051 GYGKQ-KAKKGMRFLSFPNICIFLLKRFTFDLQRMETVKLNNRFE 1094
Score = 63 (27.2 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYK--WKYENDIAEET 35
TCY+N+L+Q L+ FR AV + EN I ++T
Sbjct: 268 TCYMNALLQLLYHINIFRKAVCMMIFNIENIIGKKT 303
>ZFIN|ZDB-GENE-060518-5 [details] [associations]
symbol:usp40 "ubiquitin specific peptidase 40"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-060518-5 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55230 KO:K11869
EMBL:CR388009 EMBL:CU571254 IPI:IPI00897692 RefSeq:XP_001921353.3
UniGene:Dr.80435 Ensembl:ENSDART00000105098 GeneID:402834
KEGG:dre:402834 NextBio:20816662 Bgee:F1Q7D2 Uniprot:F1Q7D2
Length = 1263
Score = 258 (95.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 61/157 (38%), Positives = 88/157 (56%)
Query: 477 TTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDY 536
TTDLT SFGW +++ Q D+QEL R+LF ALE+ T+G + LI+ LY G + +
Sbjct: 111 TTDLTDSFGWTNNEEMGQQDVQELNRILFSALESSLVD--TSG--SSLIHRLYHGTLVNQ 166
Query: 537 VKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAM-RAFVRPETLDGANQYFCDKC 595
+ C EC R++ FLD+ + V S V+ + EA+ FV E +G N Y C C
Sbjct: 167 ITCKECSYISERQEDFLDLTVSV----SGVS--GLEEALWNMFVEEEMFEGNNLYRCSGC 220
Query: 596 GKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
G+ A K K + P LT+ L+RF+FD++ R K
Sbjct: 221 GQLVRAAKSAKLRKLPPFLTISLLRFNFDFTKCERYK 257
Score = 185 (70.2 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 48/118 (40%), Positives = 66/118 (55%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN--DIAEETS-------ITYQLQKLFVNLQTST 52
TCYLNSLIQ L TPEFR ++ + +A++ I +LQ+LF +L
Sbjct: 46 TCYLNSLIQTLLFTPEFREELFHLGPDELGCLADKDKPEAKVRVIPLELQRLFSHLLLVD 105
Query: 53 RPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 110
TTDLT SFGW +++ Q D+QEL R+LF ALE+ T+G + LI+ LY
Sbjct: 106 EQTASTTDLTDSFGWTNNEEMGQQDVQELNRILFSALESSLVD--TSG--SSLIHRLY 159
>UNIPROTKB|E1C6Z2 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 CTD:57558 KO:K11854 OMA:EREQCLA
EMBL:AADN02004267 EMBL:AADN02004268 IPI:IPI00592556
RefSeq:XP_417222.2 Ensembl:ENSGALT00000027919 GeneID:419030
KEGG:gga:419030 NextBio:20822142 Uniprot:E1C6Z2
Length = 997
Score = 134 (52.2 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 578 FVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
F+ PE L N+Y C+KC DA K + TE P+ L L L+RF FD TM R K+ D V
Sbjct: 713 FLSPERLTADNKYHCEKCASLQDAEKVAELTEGPHYLILTLLRFSFDPQTMKRRKILDNV 772
Score = 114 (45.2 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQ+LFM +FR++V N + +T +LQ LF L+ S RPA+
Sbjct: 453 TCYMNSVIQSLFMASDFRHSVLNLTEGNS---QPLMT-KLQWLFAFLEHSQRPAISPESF 508
Query: 62 -TRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSK 97
+ S+ W + A Q D E + L D L + K K
Sbjct: 509 FSASWPPWFTPGA--QQDCSEYLKYLLDRLHEEEKTGK 544
Score = 79 (32.9 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 524 LINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
LI ++ GKM ++CL+C SRE+ F D+ L P
Sbjct: 569 LIEKMFGGKMMTKIRCLKCLNISSREEAFTDLSLAFPP 606
Score = 41 (19.5 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 375 ALNATKLERVFAKPFVGPREYVRALNATKLERVF 408
+LN T +E++F + ++ LN + E F
Sbjct: 564 SLNKTLIEKMFGGKMMTKIRCLKCLNISSREEAF 597
Score = 37 (18.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 432 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFG 485
+L TIIS + EV L S + DG +R+ + ++ + + G
Sbjct: 219 ELFTIISSTEEQEVPSNALASVVQFVPLELMDGVIRNLTNDDSITDVQMMMAIG 272
>UNIPROTKB|Q9UMW8 [details] [associations]
symbol:USP18 "Ubl carboxyl-terminal hydrolase 18"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=TAS] [GO:0060337 "type I
interferon-mediated signaling pathway" evidence=TAS] [GO:0060338
"regulation of type I interferon-mediated signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_6900 GO:GO:0060337
GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 GO:GO:0060338
eggNOG:COG5077 EMBL:AF176642 EMBL:AJ243526 EMBL:AL136690
EMBL:CR457216 EMBL:BC014896 IPI:IPI00183040 RefSeq:NP_059110.2
UniGene:Hs.38260 ProteinModelPortal:Q9UMW8 SMR:Q9UMW8 IntAct:Q9UMW8
MINT:MINT-1134944 STRING:Q9UMW8 MEROPS:C19.030 PhosphoSite:Q9UMW8
DMDM:10720335 PRIDE:Q9UMW8 DNASU:11274 Ensembl:ENST00000215794
GeneID:11274 KEGG:hsa:11274 UCSC:uc002zny.3 CTD:11274
GeneCards:GC22P018632 H-InvDB:HIX0041132 HGNC:HGNC:12616
HPA:HPA044768 MIM:607057 neXtProt:NX_Q9UMW8 PharmGKB:PA37242
HOGENOM:HOG000294166 HOVERGEN:HBG054189 InParanoid:Q9UMW8 KO:K11846
OMA:LYLTVWN OrthoDB:EOG4C2HBB PhylomeDB:Q9UMW8 GenomeRNAi:11274
NextBio:42911 ArrayExpress:Q9UMW8 Bgee:Q9UMW8 CleanEx:HS_USP18
Genevestigator:Q9UMW8 GermOnline:ENSG00000184979 Uniprot:Q9UMW8
Length = 372
Score = 180 (68.4 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 42/138 (30%), Positives = 68/138 (49%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFL 553
QHD +L L++ ++ Q T + + LY +++D + C++C E SR + L
Sbjct: 137 QHDAAQLYLKLWNLIKDQI----TDVHLVERLQALYTIRVKDSLICVDCAMESSRNSSML 192
Query: 554 DIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613
+PL + S + +A+ F +P L ++ FC+ CGKK + LK T P
Sbjct: 193 TLPLSLFDVDSK-PLKTLEDALHCFFQPRELSSKSKCFCENCGKKTRGKQVLKLTHLPQT 251
Query: 614 LTLHLMRFDFDYSTMHRI 631
LT+HLMRF S +I
Sbjct: 252 LTIHLMRFSIRNSQTRKI 269
Score = 83 (34.3 bits), Expect = 5.4e-15, Sum P(2) = 5.4e-15
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET-SITYQLQKLFVNLQTSTRPAVETTD 60
TC LNSLIQ M +F + + E+ S+ +Q+ L +Q S + AV +
Sbjct: 63 TCCLNSLIQVFVMNVDFTRILKRITVPRGADEQRRSVPFQMLLLLEKMQDSRQKAVRPLE 122
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQ 92
L + + QHD +L L++ ++ Q
Sbjct: 123 LAYCLQKCNVPLFVQHDAAQLYLKLWNLIKDQ 154
>UNIPROTKB|E9PK78 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:AP002985 HGNC:HGNC:20061 ChiTaRS:USP35 IPI:IPI00983344
ProteinModelPortal:E9PK78 Ensembl:ENST00000530267 UCSC:uc010rsp.2
ArrayExpress:E9PK78 Bgee:E9PK78 Uniprot:E9PK78
Length = 586
Score = 135 (52.6 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 555 IPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLL 614
IP R GS + +++ + F+ PE L N+Y+C+ C DA K ++ ++ P L
Sbjct: 314 IPSGERTCGSEGSRS-VLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYL 372
Query: 615 TLHLMRFDFDYSTMHRIKLNDKV 637
L L+RF FD TM R K+ D V
Sbjct: 373 ILTLLRFSFDLRTMRRRKILDDV 395
Score = 122 (48.0 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 17 TCYVNSILQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFGFLEHSQRPAISPENF 72
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP-D 118
L+ S+ W S Q D E + L D L + K TG + + L Q S +P +
Sbjct: 73 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPE 124
Query: 119 EYLRETKTSIHRI 131
E + TS+ ++
Sbjct: 125 EPPAPSSTSVEKM 137
Score = 59 (25.8 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 134 VEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPP 170
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 62 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 105
>UNIPROTKB|F1PCW1 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 EMBL:AAEX03012784 EMBL:AAEX03012783
Ensembl:ENSCAFT00000007744 Uniprot:F1PCW1
Length = 962
Score = 133 (51.9 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
+++ + F+ PE L N+Y+C+ C DA K ++ ++ P L L L+RF FD TM R
Sbjct: 705 VLDLVNYFLSPERLTAENRYYCEPCASLQDAEKAVELSQGPRYLILTLLRFSFDLRTMRR 764
Query: 631 IKLNDKV 637
K+ D V
Sbjct: 765 RKILDDV 771
Score = 123 (48.4 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 460 TCYVNSVLQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFAFLEHSQRPAISPENF 515
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP-D 118
L+ S+ W S Q D E + L D L + K TG + + L Q S +P +
Sbjct: 516 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPE 567
Query: 119 EYLRETKTSIHRI 131
E + TS+ ++
Sbjct: 568 EPPSPSPTSVEKM 580
Score = 68 (29.0 bits), Expect = 6.2e-15, Sum P(3) = 6.2e-15
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ ++CL C SRE+ F D+ L P
Sbjct: 577 VEKMFGGKIVTRIRCLRCLNVSSREEAFTDLSLAFPP 613
Score = 39 (18.8 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 505 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 548
>UNIPROTKB|J9P005 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 CTD:57558 KO:K11854 OMA:EREQCLA
EMBL:AAEX03012784 EMBL:AAEX03012783 RefSeq:XP_542286.3
Ensembl:ENSCAFT00000045549 GeneID:485168 KEGG:cfa:485168
Uniprot:J9P005
Length = 1007
Score = 133 (51.9 bits), Expect = 7.2e-15, Sum P(3) = 7.2e-15
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
+++ + F+ PE L N+Y+C+ C DA K ++ ++ P L L L+RF FD TM R
Sbjct: 750 VLDLVNYFLSPERLTAENRYYCEPCASLQDAEKAVELSQGPRYLILTLLRFSFDLRTMRR 809
Query: 631 IKLNDKV 637
K+ D V
Sbjct: 810 RKILDDV 816
Score = 123 (48.4 bits), Expect = 7.2e-15, Sum P(3) = 7.2e-15
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 449 TCYVNSVLQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFAFLEHSQRPAISPENF 504
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP-D 118
L+ S+ W S Q D E + L D L + K TG + + L Q S +P +
Sbjct: 505 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPE 556
Query: 119 EYLRETKTSIHRI 131
E + TS+ ++
Sbjct: 557 EPPSPSPTSVEKM 569
Score = 68 (29.0 bits), Expect = 7.2e-15, Sum P(3) = 7.2e-15
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ ++CL C SRE+ F D+ L P
Sbjct: 566 VEKMFGGKIVTRIRCLRCLNVSSREEAFTDLSLAFPP 602
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 494 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 537
>RGD|1565984 [details] [associations]
symbol:Usp35 "ubiquitin specific peptidase 35" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
RGD:1565984 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 IPI:IPI00781678
Ensembl:ENSRNOT00000031161 UCSC:RGD:1565984 ArrayExpress:F1M8S4
Uniprot:F1M8S4
Length = 973
Score = 131 (51.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
+++ + F+ PE L N+Y+C+ C DA K ++ ++ P L L L+RF FD TM R
Sbjct: 717 VLDLVNYFLSPERLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRR 776
Query: 631 IKLNDKV 637
K+ D V
Sbjct: 777 RKILDDV 783
Score = 127 (49.8 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 46/133 (34%), Positives = 69/133 (51%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 453 TCYVNSVLQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFAFLEHSQRPAISPENF 508
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDE 119
L+ S+ W S Q D E + L D L + K TG + + L Q +P E
Sbjct: 509 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSLPSPQE 560
Query: 120 YLRETK-TSIHRI 131
L + TS+ R+
Sbjct: 561 ELPSSNATSVERM 573
Score = 64 (27.6 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 522 ADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
A + ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 567 ATSVERMFGGKIVTRICCLHCLNVSSREEAFTDLSLAFPP 606
Score = 59 (25.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNA 401
D E KT RI + + S P P+E + + NAT +ER+F V + LN
Sbjct: 534 DRLHEEEKTGT-RICQKLKQSSLP--SPQEELPSSNATSVERMFGGKIVTRICCLHCLNV 590
Query: 402 TKLERVF 408
+ E F
Sbjct: 591 SSREEAF 597
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 100 GDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLER 159
G Q D L +L R +E +T T RI + + S P P+E + + NAT +ER
Sbjct: 520 GTQQDCSEYLKYLLDRLHEE--EKTGT---RICQKLKQSSLP--SPQEELPSSNATSVER 572
Query: 160 VFAKPFVANL 169
+F V +
Sbjct: 573 MFGGKIVTRI 582
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 392 PREYVRALNATKLERVFAKPFVANL 416
P+E + + NAT +ER+F V +
Sbjct: 558 PQEELPSSNATSVERMFGGKIVTRI 582
Score = 39 (18.8 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 498 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 541
>UNIPROTKB|H7BXK0 [details] [associations]
symbol:USP41 "Putative ubiquitin carboxyl-terminal
hydrolase 41" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
EMBL:AC007731 HGNC:HGNC:20070 ProteinModelPortal:H7BXK0
Ensembl:ENST00000292729 Uniprot:H7BXK0
Length = 306
Score = 173 (66.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFL 553
QHD +L L++ ++ Q + + LY +M+D + CL+C E SR + L
Sbjct: 85 QHDAAQLYLKLWNLIKDQIADVHLV----ERLQALYMIRMKDSLICLDCAMESSRNSSML 140
Query: 554 DIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613
+ L S + +A+ F +P L ++ FC+ CGKK + LK T P
Sbjct: 141 TLRLSFFDVDSK-PLKTLEDALHCFFQPRELSSKSKCFCENCGKKTRGKQVLKLTHLPQT 199
Query: 614 LTLHLMRFDFDYSTMHRI 631
LT+HLMRF S +I
Sbjct: 200 LTIHLMRFSIRNSQTRKI 217
Score = 82 (33.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET-SITYQLQKLFVNLQTSTRPAVETTD 60
TC LNSLIQ M +F + + E+ S+ +Q+ L +Q S + AV +
Sbjct: 11 TCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRSVPFQMLLLLEKMQDSRQKAVWPLE 70
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQ 92
L + + QHD +L L++ ++ Q
Sbjct: 71 LAYCLQKYNVPLFVQHDAAQLYLKLWNLIKDQ 102
>UNIPROTKB|E1BG52 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 OMA:EREQCLA EMBL:DAAA02062722
IPI:IPI01003233 Ensembl:ENSBTAT00000017198 Uniprot:E1BG52
Length = 1020
Score = 128 (50.1 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 564 SSVAYGD----IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLM 619
++ A GD +++ + F+ PE L N+Y C+ C DA K ++ ++ P L L L+
Sbjct: 752 AAAASGDGSRSVLDLVNYFLSPERLTSENRYHCESCASLQDAEKVVELSQGPRYLILTLL 811
Query: 620 RFDFDYSTMHRIKLNDKV 637
RF FD TM R K+ D V
Sbjct: 812 RFSFDLRTMRRRKILDDV 829
Score = 123 (48.4 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 43/120 (35%), Positives = 63/120 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 449 TCYVNSILQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFAFLEHSQRPAISPENF 504
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDE 119
L+ S+ W S Q D E + L D L + K TG + + L Q S +P E
Sbjct: 505 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPE 556
Score = 69 (29.3 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 519 GDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
G A + ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 560 GPSATSVEKMFGGKIVTRICCLRCLNVSSREEAFTDLSLAFPP 602
Score = 39 (18.8 bits), Expect = 6.0e-06, Sum P(3) = 6.0e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 494 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 537
>SGD|S000000900 [details] [associations]
symbol:UBP9 "Ubiquitin-specific protease that cleaves
ubiquitin-protein fusions" species:4932 "Saccharomyces cerevisiae"
[GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
[GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IC] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SGD:S000000900 GO:GO:0005737 EMBL:BK006939
GO:GO:0006511 EMBL:U18839 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
KO:K11872 OrthoDB:EOG43XZCS eggNOG:COG5077
GeneTree:ENSGT00650000093027 HOGENOM:HOG000141813 PIR:S50601
RefSeq:NP_011024.1 ProteinModelPortal:P39967 SMR:P39967
DIP:DIP-6551N IntAct:P39967 MINT:MINT-688224 STRING:P39967
MEROPS:C19.A20 PRIDE:P39967 EnsemblFungi:YER098W GeneID:856835
KEGG:sce:YER098W CYGD:YER098w OMA:NDEAINI NextBio:983138
Genevestigator:P39967 GermOnline:YER098W Uniprot:P39967
Length = 754
Score = 192 (72.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 39/127 (30%), Positives = 72/127 (56%)
Query: 511 QFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGD 570
+F KT + I +L++G + + +KCL C SR++ FLD P+ V+ G D
Sbjct: 459 RFGPQKTDNSNDNFITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQ--GDEET--D 514
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
I + ++++ + E L+G N+++C+KC +A + + + P++L+LHL RF +
Sbjct: 515 IQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKSN 574
Query: 631 IKLNDKV 637
IKL +K+
Sbjct: 575 IKLFNKI 581
Score = 76 (31.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQ-LQKLFVNLQTSTRPAVETTD 60
TCY NS++Q L+ PEFR V + Y +A I L+ + + T+ T
Sbjct: 142 TCYCNSVLQCLYNIPEFRCNVLR--YPERVAAVNRIRKSDLKGSKIRVFTNESFETSTNS 199
Query: 61 LTRSFGWESSD---AWQQHDIQE 80
+ G++S+D A H +Q+
Sbjct: 200 GNSNTGYQSNDNEDAHNHHHLQQ 222
>MGI|MGI:1922091 [details] [associations]
symbol:Usp38 "ubiquitin specific peptidase 38" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:1922091 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5560 GeneTree:ENSGT00650000093027
HOVERGEN:HBG060424 KO:K11854 MEROPS:C19.056 CTD:84640 OMA:HYYSYAR
EMBL:AK049287 EMBL:AK052219 EMBL:AK054116 EMBL:BC054404
EMBL:BC057122 EMBL:BC058784 IPI:IPI00226313 RefSeq:NP_081830.2
UniGene:Mm.246018 ProteinModelPortal:Q8BW70 STRING:Q8BW70
PhosphoSite:Q8BW70 PaxDb:Q8BW70 PRIDE:Q8BW70
Ensembl:ENSMUST00000042724 GeneID:74841 KEGG:mmu:74841
UCSC:uc009mjd.1 InParanoid:Q8BW70 OrthoDB:EOG4PRSPX NextBio:341642
Bgee:Q8BW70 CleanEx:MM_USP38 Genevestigator:Q8BW70
GermOnline:ENSMUSG00000038250 Uniprot:Q8BW70
Length = 1042
Score = 135 (52.6 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 557 LPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTL 616
+P P G S + + + F+ PE L G NQY+C+ C +A K ++ TE P L L
Sbjct: 706 VPQNPGGESTT--SVTDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLIL 763
Query: 617 HLMRFDFDYSTMHRIKLNDKV 637
L+RF +D R K+ D V
Sbjct: 764 TLLRFSYDQKYHVRRKILDNV 784
Score = 98 (39.6 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 34/97 (35%), Positives = 41/97 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++QALFM EFR V S+ +LQ LF L + R A
Sbjct: 453 TCYMNSVLQALFMATEFRRQVLSLNLNGC----NSLMKKLQHLFAFLAHTQREAYAP--- 505
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQFK 94
R F S W Q D E R L D L + K
Sbjct: 506 -RIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK 541
Score = 86 (35.3 bits), Expect = 2.6e-14, Sum P(3) = 2.6e-14
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 515 SKTTGD-QADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
S TGD + LI ++ GK+R ++ CL CG+ + + F D+ L P
Sbjct: 575 SPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCP 622
>UNIPROTKB|Q3LFD5 [details] [associations]
symbol:USP41 "Putative ubiquitin carboxyl-terminal
hydrolase 41" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5077 EMBL:AC007731 HSSP:P54578
UniGene:Hs.38260 HOGENOM:HOG000294166 HOVERGEN:HBG054189
EMBL:AJ583822 EMBL:AJ586979 IPI:IPI00908904
ProteinModelPortal:Q3LFD5 SMR:Q3LFD5 IntAct:Q3LFD5 STRING:Q3LFD5
MEROPS:C19.070 PhosphoSite:Q3LFD5 DMDM:182702223 PRIDE:Q3LFD5
Ensembl:ENST00000454608 UCSC:uc011ahq.1 GeneCards:GC22M020704
HGNC:HGNC:20070 neXtProt:NX_Q3LFD5 InParanoid:Q3LFD5 Bgee:Q3LFD5
CleanEx:HS_USP41 Genevestigator:Q3LFD5 Uniprot:Q3LFD5
Length = 358
Score = 173 (66.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFL 553
QHD +L L++ ++ Q + + LY +M+D + CL+C E SR + L
Sbjct: 137 QHDAAQLYLKLWNLIKDQIADVHLV----ERLQALYMIRMKDSLICLDCAMESSRNSSML 192
Query: 554 DIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613
+ L S + +A+ F +P L ++ FC+ CGKK + LK T P
Sbjct: 193 TLRLSFFDVDSK-PLKTLEDALHCFFQPRELSSKSKCFCENCGKKTRGKQVLKLTHLPQT 251
Query: 614 LTLHLMRFDFDYSTMHRI 631
LT+HLMRF S +I
Sbjct: 252 LTIHLMRFSIRNSQTRKI 269
Score = 82 (33.9 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 25/92 (27%), Positives = 42/92 (45%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET-SITYQLQKLFVNLQTSTRPAVETTD 60
TC LNSLIQ M +F + + E+ S+ +Q+ L +Q S + AV +
Sbjct: 63 TCCLNSLIQVFVMNVDFARILKRITVPRGADEQRRSVPFQMLLLLEKMQDSRQKAVWPLE 122
Query: 61 LTRSFGWESSDAWQQHDIQELCRVLFDALETQ 92
L + + QHD +L L++ ++ Q
Sbjct: 123 LAYCLQKYNVPLFVQHDAAQLYLKLWNLIKDQ 154
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 179 (68.1 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHKD ISC +P + +G+ D + +WNL ++ + H + V F P GS
Sbjct: 16 GHKDVISCADFNPNN-KQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSL 74
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHE 290
S D T++ W+ + + HT QR + A+ ++W E
Sbjct: 75 VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRL--VTASDDKSVKVWGVE 132
Query: 291 RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
R + + + + + + + +F+P D ++ASC DR++ L+DT
Sbjct: 133 RKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDT 173
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 212
N K+ + + + H G++C + HP+ + +ISG+ D +K+ +L + T
Sbjct: 208 NTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG-NYLISGSSDSTIKILDLLEGRLIYTL 266
Query: 213 QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDH 252
H G V V F DG F S G D+ + W + ++
Sbjct: 267 HGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNY 306
Score = 108 (43.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/90 (30%), Positives = 42/90 (46%)
Query: 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 213
+ K+ V K F+ +L+ H + + C P I S D V++W+ +S C+ +
Sbjct: 125 SVKVWGVERKKFLYSLNRHTNWVRCARFSPDG-RLIASCGDDRTVRLWDTSSHQCINIFT 183
Query: 214 AHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243
+ G V F G+ S G DNTIK W
Sbjct: 184 DYGGSATFVDFNSSGTCIASSGADNTIKIW 213
Score = 81 (33.6 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 400 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
N K+ + + + H G++C + HP+ + +ISG+ D +K+ +L + T
Sbjct: 208 NTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG-NYLISGSSDSTIKILDLLEGRLIYTL 266
Query: 460 QAHDGHV 466
H G V
Sbjct: 267 HGHKGPV 273
Score = 64 (27.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 438 SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
SGA D +K+W++ + +Q Y+ H+ V S P+
Sbjct: 204 SGA-DNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS 239
>DICTYBASE|DDB_G0274795 [details] [associations]
symbol:DDB_G0274795 "ubiquitin-specific protease
48-like protein" species:44689 "Dictyostelium discoideum"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
dictyBase:DDB_G0274795 GO:GO:0008234 EMBL:AAFI02000012
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 RefSeq:XP_643907.1
ProteinModelPortal:Q556A3 EnsemblProtists:DDB0233894 GeneID:8619334
KEGG:ddi:DDB_G0274795 InParanoid:Q556A3 Uniprot:Q556A3
Length = 1357
Score = 179 (68.1 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 45/160 (28%), Positives = 78/160 (48%)
Query: 487 ESSDAWQQHDIQELCRVLFDALETQFK----------GSKTTGDQADLINNLYQGKMRDY 536
E S++ Q DIQE + FD +E++ + +K + +++ L+QG DY
Sbjct: 231 ELSNSLHQ-DIQEFFILFFDLIESKLEISLDNNSNNNNNKNNNNSVNILKKLFQGNY-DY 288
Query: 537 V-KCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKC 595
+C +C T +F +IPL + F + E+++ F+ E L G +QYFC C
Sbjct: 289 TTQCSDCNTIYRSPSSFYEIPLQLNGFEG------LEESLKGFLSNENLTGDDQYFCKNC 342
Query: 596 GKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLND 635
KK D + + T P L ++R+ FD + + KL++
Sbjct: 343 NKKTDCSRSTQLTTIPPFLCFQILRYSFDRQQLKKKKLHN 382
Score = 93 (37.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETS 36
TCY+NSL+Q L+M EFR V ++K +DI ++ S
Sbjct: 143 TCYVNSLLQLLYMNTEFRKLVLEFKLPSDINQDNS 177
>UNIPROTKB|Q9P2H5 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase 35"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 EMBL:AP002985 CleanEx:HS_USP34 EMBL:AJ586137
EMBL:AB037793 IPI:IPI00001726 IPI:IPI00973101 RefSeq:NP_065849.1
UniGene:Hs.531249 ProteinModelPortal:Q9P2H5 MEROPS:C19.059
PhosphoSite:Q9P2H5 DMDM:46577708 PaxDb:Q9P2H5 PRIDE:Q9P2H5
Ensembl:ENST00000526425 Ensembl:ENST00000529308 GeneID:57558
KEGG:hsa:57558 UCSC:uc001ozc.3 CTD:57558 GeneCards:GC11P077899
H-InvDB:HIX0009977 HGNC:HGNC:20061 neXtProt:NX_Q9P2H5
PharmGKB:PA134883706 HOGENOM:HOG000007432 HOVERGEN:HBG060424
InParanoid:Q9P2H5 KO:K11854 OMA:EREQCLA OrthoDB:EOG43XV2S
PhylomeDB:Q9P2H5 ChiTaRS:USP35 GenomeRNAi:57558 NextBio:64042
ArrayExpress:Q9P2H5 Bgee:Q9P2H5 CleanEx:HS_USP35
Genevestigator:Q9P2H5 GermOnline:ENSG00000118369 Uniprot:Q9P2H5
Length = 1018
Score = 135 (52.6 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 555 IPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLL 614
IP R GS + +++ + F+ PE L N+Y+C+ C DA K ++ ++ P L
Sbjct: 746 IPSGERTCGSEGSRS-VLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYL 804
Query: 615 TLHLMRFDFDYSTMHRIKLNDKV 637
L L+RF FD TM R K+ D V
Sbjct: 805 ILTLLRFSFDLRTMRRRKILDDV 827
Score = 122 (48.0 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 45/133 (33%), Positives = 70/133 (52%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD- 60
TCY+NS++QALFM +FR+ V + EN+ + +T +LQ LF L+ S RPA+ +
Sbjct: 449 TCYVNSILQALFMASDFRHCVLRLT-ENN--SQPLMT-KLQWLFGFLEHSQRPAISPENF 504
Query: 61 LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP-D 118
L+ S+ W S Q D E + L D L + K TG + + L Q S +P +
Sbjct: 505 LSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPE 556
Query: 119 EYLRETKTSIHRI 131
E + TS+ ++
Sbjct: 557 EPPAPSSTSVEKM 569
Score = 59 (25.8 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 566 VEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPP 602
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 494 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 537
>UNIPROTKB|F1PZM9 [details] [associations]
symbol:USP18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035634 "response to stilbenoid"
evidence=IEA] [GO:0032020 "ISG15-protein conjugation" evidence=IEA]
[GO:0019785 "ISG15-specific protease activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0035634
GO:GO:0006511 GO:GO:0004221 GO:GO:0032020
GeneTree:ENSGT00630000089581 OMA:LYLTVWN GO:GO:0019785
EMBL:AAEX03015346 EMBL:AAEX03015347 EMBL:AAEX03015348
EMBL:AAEX03015349 Ensembl:ENSCAFT00000025792 Uniprot:F1PZM9
Length = 339
Score = 207 (77.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV+ +L + + QHD +L +++ ++ Q T D + + LY
Sbjct: 80 SRQKAVQPMELAYCLQKYNVPMFVQHDAAQLYLTVWNLIKDQI----TDVDLVERLKALY 135
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
++++ + CLEC E+SR + L +PLP+ S + +A+R F +P L ++
Sbjct: 136 TIRVKESLVCLECTVERSRNSSMLTLPLPLFDMDSK-PLKTLEDALRCFFQPRELSDKSK 194
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI 631
FC+KCGKK + LK T P LT+HL+RF S +I
Sbjct: 195 CFCEKCGKKTCGKQVLKLTHLPQTLTIHLLRFSIRNSRTEKI 236
>RGD|1308045 [details] [associations]
symbol:Usp12 "ubiquitin specific peptidase 12" species:10116
"Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISO] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1308045 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 IPI:IPI00188181 PRIDE:F1LWD4
Ensembl:ENSRNOT00000044038 Uniprot:F1LWD4
Length = 354
Score = 175 (66.7 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 156 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 209
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 210 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 262
Score = 77 (32.2 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR+ V Y++ ++ S+ L LF ++ T + P
Sbjct: 31 TCYCNSVLQALYFCRPFRDKVLA--YKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK 88
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 89 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 135
>WB|WBGene00011216 [details] [associations]
symbol:usp-46 species:6239 "Caenorhabditis elegans"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0071947 "protein deubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:2000311 "regulation of
alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=IPI] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005768 GO:GO:0008234 GO:GO:0040027
GO:GO:0044297 GO:GO:0004221 EMBL:Z29095 GO:GO:2000311
eggNOG:COG5077 GO:GO:0071947 KO:K11842 GeneTree:ENSGT00650000093027
HOGENOM:HOG000231498 PIR:S40715 RefSeq:NP_499162.2
RefSeq:NP_499163.2 UniGene:Cel.6955 ProteinModelPortal:P34547
SMR:P34547 STRING:P34547 MEROPS:C19.A37 PaxDb:P34547 PRIDE:P34547
EnsemblMetazoa:R10E11.3a.1 EnsemblMetazoa:R10E11.3a.2 GeneID:176381
KEGG:cel:CELE_R10E11.3 UCSC:R10E11.3a.1 CTD:176381
WormBase:R10E11.3a WormBase:R10E11.3b InParanoid:P34547 OMA:STDANIQ
NextBio:892334 Uniprot:P34547
Length = 426
Score = 177 (67.4 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 520 DQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFV 579
D I+ ++QG + + +CL C T S+++ FLD+ + V +S+++ +R F
Sbjct: 192 DTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQ-NTSISH-----CLRVFS 245
Query: 580 RPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
ETL G +YFC+ C K +A K ++ + P LL LHL RF F KL+ +V
Sbjct: 246 ETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRV 303
Score = 78 (32.5 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 31/99 (31%), Positives = 43/99 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAV--YKWKYENDIAEETSITYQLQKLFVNLQTSTR------ 53
TCY NS+IQALF FR V YK + A + ++ L LF ++ + R
Sbjct: 35 TCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSIASQKRRVGTIA 94
Query: 54 PAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDAL-ET 91
P T L + E D + Q D E L + + ET
Sbjct: 95 PKRFITKLKKEN--ELFDNYMQQDAHEFFNYLINTISET 131
>UNIPROTKB|F1LSW9 [details] [associations]
symbol:RGD1561481 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00554220
Ensembl:ENSRNOT00000016098 ArrayExpress:F1LSW9 Uniprot:F1LSW9
Length = 359
Score = 173 (66.0 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 171 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 224
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 225 CSEYKYYCEECRSKQEAHKRMKEKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 277
Score = 78 (32.5 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR+ V Y++ ++ S+ L LF ++ T + P
Sbjct: 46 TCYCNSILQALYFCRPFRDKVLA--YKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK 103
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 104 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 150
>UNIPROTKB|A5D9H7 [details] [associations]
symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
species:9913 "Bos taurus" [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 eggNOG:COG5077 KO:K11842 EMBL:BT030596
IPI:IPI00852466 RefSeq:NP_001091528.1 UniGene:Bt.24513
Ensembl:ENSBTAT00000022828 GeneID:525655 KEGG:bta:525655 CTD:219333
GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 InParanoid:A5D9H7
OMA:SKFASFC OrthoDB:EOG42Z4Q8 NextBio:20874210 ArrayExpress:A5D9H7
Uniprot:A5D9H7
Length = 369
Score = 175 (66.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 171 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 224
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 225 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 277
Score = 76 (31.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V Y++ ++ S+ L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>UNIPROTKB|O75317 [details] [associations]
symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=NAS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016579 "protein deubiquitination" evidence=IDA]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:CH471075 GO:GO:0006511
GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 KO:K11842 CTD:219333 HOGENOM:HOG000231498
OMA:SKFASFC OrthoDB:EOG42Z4Q8 EMBL:AF022789 EMBL:AK289685
EMBL:AL158062 EMBL:AL355473 EMBL:BC026072 IPI:IPI00290893
RefSeq:NP_872294.2 UniGene:Hs.42400 ProteinModelPortal:O75317
SMR:O75317 IntAct:O75317 STRING:O75317 MEROPS:C19.020
PhosphoSite:O75317 PaxDb:O75317 PRIDE:O75317
Ensembl:ENST00000282344 GeneID:219333 KEGG:hsa:219333
UCSC:uc001uqy.3 GeneCards:GC13M027640 HGNC:HGNC:20485 HPA:HPA007288
MIM:603091 neXtProt:NX_O75317 PharmGKB:PA37236 HOVERGEN:HBG054038
InParanoid:O75317 GenomeRNAi:219333 NextBio:90574 Bgee:O75317
CleanEx:HS_USP12 Genevestigator:O75317 GermOnline:ENSG00000152484
Uniprot:O75317
Length = 370
Score = 175 (66.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 172 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 278
Score = 76 (31.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V Y++ ++ S+ L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>UNIPROTKB|F1RTK0 [details] [associations]
symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GeneTree:ENSGT00650000093027 OMA:SKFASFC
EMBL:CU062619 Ensembl:ENSSSCT00000010190 Uniprot:F1RTK0
Length = 374
Score = 175 (66.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 176 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 229
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 230 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 282
Score = 76 (31.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 31/109 (28%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V Y++ ++ S+ L LF ++ T + P
Sbjct: 51 TCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKKVGVIPPK 108
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 109 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 155
>UNIPROTKB|Q52KZ6 [details] [associations]
symbol:usp12-a "Ubiquitin carboxyl-terminal hydrolase 12-A"
species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC094130
RefSeq:NP_001089397.1 UniGene:Xl.52535 GeneID:734447
KEGG:xla:734447 CTD:734447 Xenbase:XB-GENE-1009335 KO:K11842
Uniprot:Q52KZ6
Length = 370
Score = 175 (66.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 172 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 278
Score = 75 (31.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLAYKSQPR-KKENLLTC-LSDLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>UNIPROTKB|Q5M981 [details] [associations]
symbol:usp12-b "Ubiquitin carboxyl-terminal hydrolase 12-B"
species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC087530
UniGene:Xl.49982 Xenbase:XB-GENE-6252498 Uniprot:Q5M981
Length = 370
Score = 175 (66.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 172 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 278
Score = 75 (31.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLAYKSQPR-KKENLLTC-LSDLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>UNIPROTKB|F1P2L3 [details] [associations]
symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
OMA:SKFASFC EMBL:AADN02005175 IPI:IPI00593873
Ensembl:ENSGALT00000027624 Uniprot:F1P2L3
Length = 375
Score = 175 (66.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 177 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 230
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 231 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 283
Score = 75 (31.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR+ V +K + +E +T L LF ++ T + P
Sbjct: 53 TCYCNSVLQALYFCRPFRDKVLAYKSQPR-KKENLLTC-LADLFHSIATQKKKVGVIPPK 110
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 111 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 157
>UNIPROTKB|F1NVC5 [details] [associations]
symbol:USP12P1 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 EMBL:AADN02013537 IPI:IPI00590579
Ensembl:ENSGALT00000022631 OMA:NCEAVSS ArrayExpress:F1NVC5
Uniprot:F1NVC5
Length = 375
Score = 173 (66.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 38/122 (31%), Positives = 68/122 (55%)
Query: 519 GDQADL--INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMR 576
GD+ DL ++ ++QG + + +CL C S+++ FLD+ + V +S+ + +R
Sbjct: 169 GDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQ-NTSITH-----CLR 222
Query: 577 AFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLND 635
F ETL +Y+C++C K +A K ++ + P +L LHL RF + +HR KL+
Sbjct: 223 GFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKY-MDQLHRYTKLSY 281
Query: 636 KV 637
+V
Sbjct: 282 RV 283
Score = 77 (32.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 31/108 (28%), Positives = 47/108 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR-----PAV 56
TCY NS++QAL+ FR V +K + +E+ +T L LF ++ T + P
Sbjct: 53 TCYCNSVLQALYFCRPFREKVLAYKVQPR-KKESLLTC-LSDLFNSIATQKKKVGVIPPK 110
Query: 57 ETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
+ R E D + Q D E L + D L+ + K K G
Sbjct: 111 KFISRLRKEN-ELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNG 157
>UNIPROTKB|E2RG22 [details] [associations]
symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
endopeptidase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11842 CTD:219333
GeneTree:ENSGT00650000093027 OMA:SKFASFC EMBL:AAEX03014246
EMBL:AAEX03014247 RefSeq:XP_543159.2 Ensembl:ENSCAFT00000024112
GeneID:486033 KEGG:cfa:486033 NextBio:20859899 Uniprot:E2RG22
Length = 370
Score = 175 (66.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 172 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY-MDQLHRYTKLSYRV 278
Score = 74 (31.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLAYKSQPR-KKENLLTC-LADLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>MGI|MGI:1270128 [details] [associations]
symbol:Usp12 "ubiquitin specific peptidase 12" species:10090
"Mus musculus" [GO:0004197 "cysteine-type endopeptidase activity"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
MGI:MGI:1270128 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
CTD:219333 GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498
OMA:SKFASFC OrthoDB:EOG42Z4Q8 MEROPS:C19.020 HOVERGEN:HBG054038
EMBL:AK006739 EMBL:AK035629 EMBL:AK167153 EMBL:BC049274
EMBL:BC055398 EMBL:BC068136 EMBL:AF441835 IPI:IPI00228375
IPI:IPI00938515 RefSeq:NP_035799.1 UniGene:Mm.167971
ProteinModelPortal:Q9D9M2 SMR:Q9D9M2 STRING:Q9D9M2
PhosphoSite:Q9D9M2 PaxDb:Q9D9M2 PRIDE:Q9D9M2
Ensembl:ENSMUST00000085614 GeneID:22217 KEGG:mmu:22217
UCSC:uc008xtg.1 InParanoid:Q80Y43 NextBio:302225 Bgee:Q9D9M2
CleanEx:MM_USP12 Genevestigator:Q9D9M2
GermOnline:ENSMUSG00000029640 Uniprot:Q9D9M2
Length = 370
Score = 175 (66.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 172 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKY-MDQLHRYTKLSYRV 278
Score = 74 (31.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 32/109 (29%), Positives = 47/109 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + P
Sbjct: 47 TCYCNSVLQALYFCRPFREKVLAYKSQPR-KKENLLTC-LADLFHSIATQKKKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + D L+ + K K G
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
>ZFIN|ZDB-GENE-060526-139 [details] [associations]
symbol:si:ch211-257m21.2 "si:ch211-257m21.2"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-060526-139
GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0004221 GeneTree:ENSGT00650000093229 EMBL:CABZ01065961
EMBL:BX897740 EMBL:CABZ01065962 EMBL:CABZ01065963 EMBL:CABZ01065964
IPI:IPI00805832 Ensembl:ENSDART00000083890 ArrayExpress:F1Q6K1
Bgee:F1Q6K1 Uniprot:F1Q6K1
Length = 2589
Score = 184 (69.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 48/145 (33%), Positives = 73/145 (50%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D L+ K K +Q + N +QG D C +C RE+TF
Sbjct: 1742 EQQDAYEFFTSLVDQLDEHLK--KIGREQ--IFKNTFQGIFSDQKICKDCPHRYEREETF 1797
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E LDG+N Y+C+KC +K K P
Sbjct: 1798 MALNLGV----TSCQSLEI--SLDQFVRGEVLDGSNAYYCEKCKEKRTTVKRTCIKSLPS 1851
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1852 VLVIHLMRFGFDWESGRSIKYDEQI 1876
Score = 87 (35.7 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+N++ Q L+M P V + + + EE S+ Q+Q LF +L S +
Sbjct: 1669 TCYMNAVFQQLYMQPGLPEGVLSIEDDTENPEE-SVFCQVQSLFGHLMESKLQYYVPENF 1727
Query: 62 TRSFGWESSDAW--QQHDIQELCRVLFDALETQFK 94
+ F + + + +Q D E L D L+ K
Sbjct: 1728 WKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLK 1762
Score = 46 (21.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 236 IDNTIKTWSSEL--SESDHIV 254
+DN TW++EL SE+D+I+
Sbjct: 1518 LDNFEPTWTTELETSEADNIL 1538
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 212 (79.7 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 88/355 (24%), Positives = 148/355 (41%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
+L+G + +A P + SG+ VK+WN + +QT + H VR V F PD
Sbjct: 913 SLEGRSGWVKSVAFSPDG-KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPD 971
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLW 287
G Q S D TIK W+S E H K + + + +LW
Sbjct: 972 GKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP--DGKHLVSGSDDNTIKLW 1029
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRE 347
+ +E ++ + S+H V F+P DK LAS + D +I L+D+ L R + + +
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQG 1088
Query: 348 TKTSIHRIP-------RNIDPSL---HPFEGPREYVRALNATKLERVFAKPFVGPREYVR 397
+ S+ P + D ++ +P G + + ++ V P G +
Sbjct: 1089 VR-SVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD-GKQLASG 1146
Query: 398 ALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSC 455
++T KL + L+GH D I + P KL + SG+YD K+W+ +
Sbjct: 1147 YYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL--LASGSYDQTAKLWDPATGEL 1204
Query: 456 VQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALET 510
+Q ++ H V + P + + S+G E+ W EL + L D E+
Sbjct: 1205 LQIFEGHSKWVESVAFSPDGKLL-ASSSYG-ETIKLWDPVT-GELLQTLNDPDES 1256
Score = 191 (72.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 77/315 (24%), Positives = 127/315 (40%)
Query: 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229
+GH I +A P + S + D +K+W+L + QT +H VR V F PDG
Sbjct: 831 EGHPHSIWSVAFAPDG-KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGK 889
Query: 230 QFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEH 289
S +D+TIK W+ E L K + + +LW
Sbjct: 890 LLASSSLDSTIKVWNPATGELQQ--SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNP 947
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLS---RNPDEYLR 346
E ++ + S+ V F+P K LAS +SD +I L+++ L + D ++R
Sbjct: 948 ATGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Query: 347 ETKTSI---HRIPRNIDPSLHPFE-GPREYVRALNATKLERVFAKPFVGPREYVRA--LN 400
S H + + D ++ ++ E ++L V A F + + + L+
Sbjct: 1007 AVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS-RSVHAVAFSPDDKQLASSSLD 1065
Query: 401 AT-KLERVFAKPFVANLDGHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQT 458
+T KL L+GH G+ + P KL + S +YDG +K+WN + QT
Sbjct: 1066 STIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKL--LASNSYDGTIKLWNPLTGELQQT 1123
Query: 459 YQAHDGHVRDTSTRP 473
V + P
Sbjct: 1124 LTGRSDWVDSVAFSP 1138
Score = 178 (67.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 48/179 (26%), Positives = 78/179 (43%)
Query: 153 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 212
N KL + L+GH + +A P + S + D +K+WN T+ QT+
Sbjct: 940 NTVKLWNPATGELLQTLEGHSQSVRSVAFSPDG-KQLASSSSDTTIKLWNSTTGELQQTF 998
Query: 213 QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQR 272
+ HD +R V F PDG +S DNTIK W SE + H+ ++
Sbjct: 999 KGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ 1058
Query: 273 KSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
+ ++ +LW+ E R + + V F+P D +LAS + D +I L++
Sbjct: 1059 LAS--SSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWN 1114
Score = 166 (63.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 63/274 (22%), Positives = 107/274 (39%)
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX 269
QT + H G V V F PDG Q +S D+T+K W E + H+
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP- 802
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
K + + LW+ E ++ F + S+ V F P K LAS + D +I +
Sbjct: 803 -DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE-LASASDDSTIKI 860
Query: 330 YDTRATVLSRNPDEYLRETKTSIHRIP-------RNIDPSL---HPFEGPREYVRALNAT 379
+D L + D + + + S+ P ++D ++ +P G + +
Sbjct: 861 WDLATGELQQTLDSHSQSVR-SVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSG 919
Query: 380 KLERVFAKPFVGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISG 439
++ V P N KL + L+GH + +A P + S
Sbjct: 920 WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDG-KQLASS 978
Query: 440 AYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+ D +K+WN T+ QT++ HD +R + P
Sbjct: 979 SSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP 1012
Score = 149 (57.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/163 (25%), Positives = 67/163 (41%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L+ H + + P ++SG+YD VK+W+ + +QT H G V + F PDG
Sbjct: 746 LENHLGPVESVVFSPDG-KQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
S DNTI W S E H K A+ ++W+
Sbjct: 805 KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP--DGKELASASDDSTIKIWD 862
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
E + + S+ V F+P D +LAS + D +I +++
Sbjct: 863 LATGELQQTLDSHSQSVRSVAFSP-DGKLLASSSLDSTIKVWN 904
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 40/152 (26%), Positives = 63/152 (41%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L G D + +A P + SG YD +K+W+ + +QT + H ++ V F PDG
Sbjct: 1124 LTGRSDWVDSVAFSPDG-KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDG 1182
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
S D T K W E I H+ K ++ G+ +LW+
Sbjct: 1183 KLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP--DGKLLASSSYGETIKLWD 1240
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILAS 320
E ++ + +S V F+P D + LAS
Sbjct: 1241 PVTGELLQTLNDPDESAGSVAFSP-DGNRLAS 1271
>FB|FBgn0033738 [details] [associations]
symbol:CG8830 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 EMBL:AE013599 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5533 GeneTree:ENSGT00650000093027 KO:K11854
EMBL:BT010041 RefSeq:NP_610784.1 RefSeq:NP_725167.1
UniGene:Dm.18735 SMR:Q7JQI1 MEROPS:C19.A27
EnsemblMetazoa:FBtr0087950 EnsemblMetazoa:FBtr0087951 GeneID:36361
KEGG:dme:Dmel_CG8830 UCSC:CG8830-RA FlyBase:FBgn0033738
InParanoid:Q7JQI1 OMA:QIALMHH OrthoDB:EOG48KPS4 GenomeRNAi:36361
NextBio:798127 Uniprot:Q7JQI1
Length = 852
Score = 183 (69.5 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 45/132 (34%), Positives = 62/132 (46%)
Query: 514 GSKTTGDQAD------LINNLYQGKMRDYVKCLECGTEKSREDTFLDIPL--PVRPFGSS 565
G K G Q D I+ + GK+ +CL CG E ED+F ++ L P
Sbjct: 524 GLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCG 583
Query: 566 VAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDY 625
+ + + + PE LDG NQYFC +C K CDA + + T+ P L L L +F +D
Sbjct: 584 ATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQ 643
Query: 626 STMHRIKLNDKV 637
R KL KV
Sbjct: 644 KYHFRTKLMHKV 655
Score = 73 (30.8 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS++QAL MT +F + + + + + + Q+ + +L+ P+ +
Sbjct: 366 TCYMNSVLQALAMTSDFSRQILLIECNSVLLMK--VQQQIALMHHSLRYELTPS-RVLNA 422
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDAL-ETQFKGSKTTG 100
TR S Q D E L D L E + S TG
Sbjct: 423 TRP---PSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTG 459
>UNIPROTKB|C0HB46 [details] [associations]
symbol:usp12 "Ubiquitin carboxyl-terminal hydrolase 12"
species:8030 "Salmo salar" [GO:0004197 "cysteine-type endopeptidase
activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
EMBL:BT044911 EMBL:BT059552 RefSeq:NP_001133405.1 UniGene:Ssa.17383
GeneID:100194904 CTD:100194904 Uniprot:C0HB46
Length = 372
Score = 169 (64.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 34/113 (30%), Positives = 62/113 (54%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 174 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 227
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
+Y+C++C K +AHK ++ + P +L LHL RF + KL+ +V
Sbjct: 228 CSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRV 280
Score = 75 (31.5 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 32/113 (28%), Positives = 49/113 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR + ++ + +E +T L LF ++ R P
Sbjct: 47 TCYCNSVLQALYFCRPFREKILAYRSQPR-RKENLLTC-LADLFHSIANQKRKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTGDQAD 104
T L + E D + Q D E L + D L+ + K KT G A+
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTNGRLAN 155
>FB|FBgn0005632 [details] [associations]
symbol:faf "fat facets" species:7227 "Drosophila
melanogaster" [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0048749
"compound eye development" evidence=IMP] [GO:0008583 "mystery cell
differentiation" evidence=IMP;TAS] [GO:0007349 "cellularization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0016579 "protein deubiquitination" evidence=IMP;NAS;IDA;TAS]
[GO:0004843 "ubiquitin-specific protease activity"
evidence=NAS;TAS] [GO:0006897 "endocytosis" evidence=NAS]
[GO:0045861 "negative regulation of proteolysis" evidence=NAS]
[GO:0008354 "germ cell migration" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0009950 "dorsal/ventral
axis specification" evidence=IGI;IMP] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297 GO:GO:0005737
SUPFAM:SSF48371 GO:GO:0007601 GO:GO:0006897 GO:GO:0045861
GO:GO:0048477 GO:GO:0050896 GO:GO:0009790 GO:GO:0006511
GO:GO:0007097 GO:GO:0007349 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GO:GO:0008354 EMBL:L04959 EMBL:L04958 EMBL:L04960
EMBL:AF145677 PIR:B49132 RefSeq:NP_524612.2 RefSeq:NP_733455.1
ProteinModelPortal:P55824 SMR:P55824 STRING:P55824 MEROPS:C19.007
PaxDb:P55824 PRIDE:P55824 EnsemblMetazoa:FBtr0085843 GeneID:43749
KEGG:dme:Dmel_CG1945 FlyBase:FBgn0005632 eggNOG:COG5077
GeneTree:ENSGT00650000093229 InParanoid:P55824 KO:K11840
OMA:NGTRPSE OrthoDB:EOG4D254M PhylomeDB:P55824 ChiTaRS:faf
GenomeRNAi:43749 NextBio:835588 Bgee:P55824 GermOnline:CG1945
GO:GO:0008583 Uniprot:P55824
Length = 2778
Score = 203 (76.5 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 66/215 (30%), Positives = 97/215 (45%)
Query: 424 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRS 483
S L P+ STI G +D K +++ VQ AH GH P T +
Sbjct: 1731 SALVSLPSSSSTIEDGLHDVR-KNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHF-KL 1788
Query: 484 FGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECG 543
G E + +Q D E L ++L+ +G K G Q L+N G D C EC
Sbjct: 1789 LG-EPVNLREQQDAVEFFMSLLESLD---EGLKALG-QPQLMNATLGGSFSDQKICQECP 1843
Query: 544 TEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHK 603
S+E+ F + +R S + E++ +V+ E L+GA+ Y CDKC KK K
Sbjct: 1844 HRYSKEEPFSVFSVDIRNHSS------LTESLEQYVKGELLEGADAYHCDKCDKKVVTVK 1897
Query: 604 GLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
+ + P +L + L RF++DY + IK ND E
Sbjct: 1898 RVCVKKLPPVLAIQLKRFEYDYERVCAIKFNDYFE 1932
Score = 63 (27.2 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYK 24
TCY+NS++Q L+M P R + +
Sbjct: 1676 TCYMNSVLQQLYMVPAVRVGILR 1698
Score = 39 (18.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 12/64 (18%), Positives = 25/64 (39%)
Query: 81 LCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLH 140
+C+V A+ G K D+ + + Q + +E+ + +H P + +L
Sbjct: 1153 MCKVPKAAVTVAVTGDKIAKDEEEKLYPTEQAGIEDEEEHCTPEQMFLHPTPAQVLYNLS 1212
Query: 141 PFEG 144
G
Sbjct: 1213 VLHG 1216
>UNIPROTKB|F1MP08 [details] [associations]
symbol:USP38 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 OMA:HYYSYAR EMBL:DAAA02044378
IPI:IPI00867388 UniGene:Bt.46819 PRIDE:F1MP08
Ensembl:ENSBTAT00000001785 Uniprot:F1MP08
Length = 1040
Score = 131 (51.2 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 557 LPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTL 616
+P +P G + + + + F+ PE L G NQY+C+ C +A K ++ TE P L L
Sbjct: 705 VPQKPGGETTP--SVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLIL 762
Query: 617 HLMRFDFDYSTMHRIKLNDKV 637
L+RF +D R K+ D V
Sbjct: 763 TLLRFSYDQKYHVRRKILDNV 783
Score = 97 (39.2 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 34/97 (35%), Positives = 41/97 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQALFM +FR V S+ +LQ LF L + R A
Sbjct: 453 TCYMNSVIQALFMATDFRRQVLSLNLNGC----NSLMKKLQHLFAFLAHTQREAYAP--- 505
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQFK 94
R F S W Q D E R L D L + K
Sbjct: 506 -RIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK 541
Score = 76 (31.8 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 517 TTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGS 564
T+ + LI ++ GK+R ++ CL C + + + F D+ L P S
Sbjct: 578 TSDGEKTLIEKMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCPSSS 625
>UNIPROTKB|I3LHI4 [details] [associations]
symbol:I3LHI4 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 Ensembl:ENSSSCT00000026503
Uniprot:I3LHI4
Length = 915
Score = 181 (68.8 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 491 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 546
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 547 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 600
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 601 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 634
Score = 74 (31.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 382 TCYMNSVIQQLYMIPSIRNGI 402
>ZFIN|ZDB-GENE-060228-3 [details] [associations]
symbol:usp12a "ubiquitin specific peptidase 12a"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0004197
"cysteine-type endopeptidase activity" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-060228-3 GO:GO:0006511 GO:GO:0004197
GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 OMA:SKFASFC
OrthoDB:EOG42Z4Q8 EMBL:BC115286 IPI:IPI00508425
RefSeq:NP_001077025.1 UniGene:Dr.5972 Ensembl:ENSDART00000112670
GeneID:565736 KEGG:dre:565736 CTD:565736 NextBio:20886545
Bgee:A4FUN7 Uniprot:A4FUN7
Length = 371
Score = 171 (65.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/125 (28%), Positives = 66/125 (52%)
Query: 513 KGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDII 572
+ + +T ++ ++QG + + +CL C T S+++ FLD+ + V +S+ +
Sbjct: 161 QNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH---- 215
Query: 573 EAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIK 632
+R F ETL +Y+C++C K +AHK ++ + P +L LHL RF + K
Sbjct: 216 -CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTK 274
Query: 633 LNDKV 637
L+ +V
Sbjct: 275 LSYRV 279
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTR------PA 55
TCY NS++QAL+ FR + ++ + +E +T L LF ++ R P
Sbjct: 47 TCYCNSVLQALYFCRPFREKILAYRSQPR-RKENLLTC-LADLFHSIANQKRKVGVIPPK 104
Query: 56 VETTDLTRSFGWESSDAWQQHDIQE----LCRVLFDALETQFKGSKTTGDQAD 104
T L + E D + Q D E L + D L+ + K K G A+
Sbjct: 105 KFITRLRKEN--ELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNGKLAN 155
>FB|FBgn0039025 [details] [associations]
symbol:Usp12-46 "Ubiquitin-specific protease 12/46 ortholog"
species:7227 "Drosophila melanogaster" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0045746 "negative regulation of Notch signaling pathway"
evidence=IGI;IMP] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297
GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
GeneTree:ENSGT00650000093027 OMA:TEPTWVH UniGene:Dm.11299
EMBL:BT010235 RefSeq:NP_651099.1 SMR:Q9VCT9 STRING:Q9VCT9
MEROPS:C19.A23 EnsemblMetazoa:FBtr0084311 GeneID:42702
KEGG:dme:Dmel_CG7023 UCSC:CG7023-RB FlyBase:FBgn0039025
InParanoid:Q9VCT9 GenomeRNAi:42702 NextBio:830136 Uniprot:Q9VCT9
Length = 424
Score = 154 (59.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/126 (27%), Positives = 64/126 (50%)
Query: 514 GSKTTGDQAD--LINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDI 571
G+ T G ++ ++ ++QG + +CL C T S+++ F D+ + V +S+ +
Sbjct: 211 GTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQ-NTSITH--- 266
Query: 572 IEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI 631
+R F ETL N++ CD C +A K ++ + P +L LHL RF + I
Sbjct: 267 --CLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHI 324
Query: 632 KLNDKV 637
K++ +V
Sbjct: 325 KVSHRV 330
Score = 91 (37.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 30/105 (28%), Positives = 46/105 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQT------STRPA 55
TCY NS++QAL+ FR V ++K +N +ET ++ L LF ++ T S P
Sbjct: 32 TCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSC-LADLFYSIATQKKKVGSIAPK 90
Query: 56 VETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTG 100
T L + E D + Q D E L + + + G
Sbjct: 91 KFITRLRKEK--EEFDNYMQQDAHEFLNFLINHINEIILAERNAG 133
>UNIPROTKB|E1BXQ0 [details] [associations]
symbol:USP18 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0019785 "ISG15-specific
protease activity" evidence=IEA] [GO:0032020 "ISG15-protein
conjugation" evidence=IEA] [GO:0035634 "response to stilbenoid"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0035634
GO:GO:0006511 GO:GO:0004221 GO:GO:0032020
GeneTree:ENSGT00630000089581 OMA:LYLTVWN GO:GO:0019785
EMBL:AADN02006534 IPI:IPI00602326 Ensembl:ENSGALT00000021310
Uniprot:E1BXQ0
Length = 379
Score = 195 (73.7 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 43/139 (30%), Positives = 74/139 (53%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFL 553
Q+D +L L++ L+ Q K + + +++LY +++++ C C +E R + L
Sbjct: 142 QYDAAQLFLTLWNLLKKQMKNPELV----EKLSDLYTISVQEHLACQICSSETKRNSSML 197
Query: 554 DIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613
+P+P+ SS+ + + ++ F RPE L G N FC+ CGKK + +K P
Sbjct: 198 SLPVPLLDSDSSMLK-TLEKCLQCFFRPEELTGHNMCFCEHCGKKTPFQQSVKLVHLPQT 256
Query: 614 LTLHLMRFDFDYST-MHRI 631
LT+HL RF F S +H+I
Sbjct: 257 LTIHLKRFCFGRSAYIHKI 275
>UNIPROTKB|E1C8J6 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0007610
"behavior" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0032228 "regulation of synaptic transmission,
GABAergic" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 EMBL:AADN02031293 KO:K11842
GeneTree:ENSGT00650000093027 OMA:TEPTWVH CTD:64854
EMBL:AADN02031294 IPI:IPI00681234 RefSeq:XP_420711.1
UniGene:Gga.10414 Ensembl:ENSGALT00000032088 GeneID:422758
KEGG:gga:422758 NextBio:20825346 Uniprot:E1C8J6
Length = 366
Score = 163 (62.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 168 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 221
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 222 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 274
Score = 76 (31.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 32/126 (25%), Positives = 51/126 (40%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 43 TCYCNSVLQALYFCRPFRENVLSYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 100
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTGDQADLINNLYQVL 113
E+ D + Q D E L + D L+ + K K G + N+ +
Sbjct: 101 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN--GNMNEAE 158
Query: 114 SRNPDE 119
N E
Sbjct: 159 ENNKQE 164
>UNIPROTKB|H7BZK6 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 HGNC:HGNC:20075 EMBL:AC026448
ProteinModelPortal:H7BZK6 SMR:H7BZK6 Ensembl:ENST00000451218
Bgee:H7BZK6 Uniprot:H7BZK6
Length = 339
Score = 163 (62.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 141 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 194
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 195 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 247
Score = 74 (31.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 16 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 73
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 74 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 120
>UNIPROTKB|I3LLE9 [details] [associations]
symbol:USP46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032228 "regulation of synaptic transmission,
GABAergic" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:CU469206
EMBL:FP325228 ProteinModelPortal:I3LLE9 Ensembl:ENSSSCT00000030149
Uniprot:I3LLE9
Length = 354
Score = 163 (62.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 156 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 209
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 210 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 262
Score = 74 (31.1 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 31 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 88
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 89 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 135
>TAIR|locus:2140074 [details] [associations]
symbol:UBP3 "ubiquitin-specific protease 3" species:3702
"Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006007 "glucose catabolic process" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009755
"hormone-mediated signaling pathway" evidence=RCA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008234
GO:GO:0006511 EMBL:AL161596 EMBL:AL035708 GO:GO:0004221
eggNOG:COG5533 KO:K11842 HOGENOM:HOG000231498 EMBL:U76845
EMBL:AY058889 EMBL:AY079044 IPI:IPI00529126 PIR:T06097
RefSeq:NP_568074.1 UniGene:At.24733 ProteinModelPortal:O24454
SMR:O24454 STRING:O24454 MEROPS:C19.008 PaxDb:O24454 PRIDE:O24454
EnsemblPlants:AT4G39910.1 GeneID:830150 KEGG:ath:AT4G39910
GeneFarm:4911 TAIR:At4g39910 InParanoid:O24454 OMA:TEPTWVH
PhylomeDB:O24454 ProtClustDB:CLSN2688340 Genevestigator:O24454
GermOnline:AT4G39910 Uniprot:O24454
Length = 371
Score = 170 (64.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++N++QG + + +CL C T +R++TFLD+ L + S I ++ F ETL
Sbjct: 172 VHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSS------ITSCLKNFSSTETL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDF 623
+++FCDKC +A K +K + P++L +HL RF +
Sbjct: 226 HAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 264
Score = 67 (28.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN-DIAE-ETSITYQLQKLF--VNLQTSTRPAVE 57
TCY NS++QAL+ FR + ++ N +A+ E ++ L LF ++ Q +
Sbjct: 31 TCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQKKKTGVIA 90
Query: 58 TTDLTRSFGWESS--DAWQQHDIQELCRVLF----DALETQFKGSKT 98
+ ++ ++ D E L D LE + K +KT
Sbjct: 91 PKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKT 137
>UNIPROTKB|F1M625 [details] [associations]
symbol:Usp46 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1564808 GO:GO:0007610
GO:GO:0032228 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00361813
Ensembl:ENSRNOT00000002879 Uniprot:F1M625
Length = 365
Score = 163 (62.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 167 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 220
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 221 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 273
Score = 74 (31.1 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 42 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 99
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 100 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 146
>UNIPROTKB|P62068 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0032228
"regulation of synaptic transmission, GABAergic" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007610 "behavior"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610
GO:GO:0032228 EMBL:CH471057 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
OrthoDB:EOG42Z4Q8 HPA:HPA007288 HOVERGEN:HBG054038 OMA:TEPTWVH
EMBL:GU455414 EMBL:AK022614 EMBL:AK024318 EMBL:AK296493
EMBL:AK299883 EMBL:AK302438 EMBL:BC037574 IPI:IPI00303458
IPI:IPI00909695 IPI:IPI00935919 IPI:IPI00936274
RefSeq:NP_001127695.1 RefSeq:NP_073743.2 UniGene:Hs.7966
ProteinModelPortal:P62068 SMR:P62068 IntAct:P62068 STRING:P62068
MEROPS:C19.052 DMDM:49065850 PRIDE:P62068 DNASU:64854
Ensembl:ENST00000441222 Ensembl:ENST00000508499 GeneID:64854
KEGG:hsa:64854 UCSC:uc003gzm.4 UCSC:uc003gzn.3 UCSC:uc011bzr.2
UCSC:uc011bzs.2 CTD:64854 GeneCards:GC04M053376 HGNC:HGNC:20075
MIM:612849 neXtProt:NX_P62068 PharmGKB:PA134922048
InParanoid:P62068 GenomeRNAi:64854 NextBio:66987
ArrayExpress:P62068 Bgee:P62068 CleanEx:HS_USP46
Genevestigator:P62068 GermOnline:ENSG00000109189 Uniprot:P62068
Length = 366
Score = 163 (62.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 168 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 221
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 222 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 274
Score = 74 (31.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 43 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 100
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 101 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
>UNIPROTKB|Q5RBQ4 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0007610 "behavior" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0032228
"regulation of synaptic transmission, GABAergic" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HSSP:Q93009
KO:K11842 HOGENOM:HOG000231498 HOVERGEN:HBG054038 CTD:64854
EMBL:CR858584 EMBL:CR858606 RefSeq:NP_001127337.1
RefSeq:NP_001128936.1 UniGene:Pab.19202 UniGene:Pab.19798
ProteinModelPortal:Q5RBQ4 SMR:Q5RBQ4 PRIDE:Q5RBQ4 GeneID:100174399
GeneID:100189895 KEGG:pon:100174399 KEGG:pon:100189895
InParanoid:Q5RBN2 Uniprot:Q5RBQ4
Length = 366
Score = 163 (62.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 168 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 221
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 222 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 274
Score = 74 (31.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 43 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 100
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 101 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
>MGI|MGI:1916977 [details] [associations]
symbol:Usp46 "ubiquitin specific peptidase 46" species:10090
"Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007610 "behavior"
evidence=IMP] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032228 "regulation of
synaptic transmission, GABAergic" evidence=IMP] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 MGI:MGI:1916977 GO:GO:0032228 GO:GO:0006511
GO:GO:0001662 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5077 KO:K11842 GeneTree:ENSGT00650000093027
HOGENOM:HOG000231498 OrthoDB:EOG42Z4Q8 HOVERGEN:HBG054038
OMA:TEPTWVH MEROPS:C19.052 CTD:64854 EMBL:AK145298 EMBL:BC039916
IPI:IPI00228384 RefSeq:NP_808229.1 UniGene:Mm.48795
ProteinModelPortal:P62069 SMR:P62069 STRING:P62069 PaxDb:P62069
PRIDE:P62069 Ensembl:ENSMUST00000068058 GeneID:69727 KEGG:mmu:69727
InParanoid:Q3ULU5 NextBio:330198 Bgee:P62069 CleanEx:MM_USP46
Genevestigator:P62069 GermOnline:ENSMUSG00000054814 Uniprot:P62069
Length = 366
Score = 163 (62.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 168 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 221
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 222 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 274
Score = 74 (31.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 43 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 100
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 101 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
>RGD|1564808 [details] [associations]
symbol:Usp46 "ubiquitin specific peptidase 46" species:10116
"Rattus norvegicus" [GO:0001662 "behavioral fear response"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0007610 "behavior" evidence=ISO] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0032228 "regulation of
synaptic transmission, GABAergic" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1564808 GO:GO:0008234 GO:GO:0006511
GO:GO:0004221 KO:K11842 CTD:64854 EMBL:GU455413
RefSeq:NP_001178525.1 UniGene:Rn.12107 GeneID:289584
KEGG:rno:289584 Uniprot:G8ACC6
Length = 366
Score = 163 (62.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 168 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 221
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 222 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 274
Score = 74 (31.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 43 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 100
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 101 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
>UNIPROTKB|F1MZM8 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0032228 "regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0007610 "behavior"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
OMA:TEPTWVH EMBL:DAAA02017666 EMBL:DAAA02017667 IPI:IPI00731835
UniGene:Bt.25057 Ensembl:ENSBTAT00000004472 NextBio:20872216
Uniprot:F1MZM8
Length = 382
Score = 163 (62.4 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 35/114 (30%), Positives = 63/114 (55%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 184 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 237
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 238 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 290
Score = 74 (31.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 59 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 116
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 117 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 163
>UNIPROTKB|F1RX17 [details] [associations]
symbol:LOC100517440 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
EMBL:CU861899 Ensembl:ENSSSCT00000013397 OMA:LERDNAN Uniprot:F1RX17
Length = 1812
Score = 181 (68.8 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 932 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 987
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 988 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1041
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1042 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1075
Score = 74 (31.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 823 TCYMNSVIQQLYMIPSIRNGI 843
Score = 45 (20.9 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 91 LDGDKDSINCARQEAVRMVRVLT 113
Score = 45 (20.9 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 91 LDGDKDSINCARQEAVRMVRVLT 113
>UNIPROTKB|F1LSM0 [details] [associations]
symbol:Usp24 "Ubiquitin carboxyl-terminal hydrolase"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
PROSITE:PS50030 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 IPI:IPI00957827 PRIDE:F1LSM0
Ensembl:ENSRNOT00000029228 RGD:1306799 ArrayExpress:F1LSM0
Uniprot:F1LSM0
Length = 2616
Score = 170 (64.9 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K +Q + N +QG D C +C RE+ F
Sbjct: 1766 EQQDAYEFFTSLIDQMDEYLK--KMGREQ--IFKNTFQGIYSDQKICKDCPHRYEREEAF 1821
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1822 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPS 1875
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1876 VLVIHLMRFGFDWESGRSIKYDEQI 1900
Score = 88 (36.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+N++ Q L+M P ++ + D ++ S+ YQ+Q LF +L S +
Sbjct: 1693 TCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDD-SVFYQVQSLFGHLMESKLQYYVPENF 1751
Query: 62 TRSFGWESSDAW--QQHDIQELCRVLFDALETQFK 94
+ F + + + +Q D E L D ++ K
Sbjct: 1752 WKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLK 1786
>MGI|MGI:1919936 [details] [associations]
symbol:Usp24 "ubiquitin specific peptidase 24" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1919936 GO:GO:0008234
InterPro:IPR015940 PROSITE:PS50030 GO:GO:0006511 SUPFAM:SSF46934
GO:GO:0004221 EMBL:AL954352 eggNOG:COG5077
GeneTree:ENSGT00650000093229 KO:K11840 CTD:23358
HOGENOM:HOG000068011 HOVERGEN:HBG105784 OrthoDB:EOG4T782B
ChiTaRS:USP24 EMBL:AK045043 EMBL:AL840623 EMBL:BC029165
IPI:IPI00123410 IPI:IPI00752867 RefSeq:NP_899048.2
UniGene:Mm.234544 ProteinModelPortal:B1AY13 SMR:B1AY13
PhosphoSite:B1AY13 PaxDb:B1AY13 PRIDE:B1AY13 DNASU:329908
Ensembl:ENSMUST00000094933 Ensembl:ENSMUST00000106798 GeneID:329908
KEGG:mmu:329908 UCSC:uc008tyf.2 UCSC:uc008tyh.2 InParanoid:B1AY13
NextBio:399031 Bgee:B1AY13 Genevestigator:B1AY13 Uniprot:B1AY13
Length = 2617
Score = 170 (64.9 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K +Q + N +QG D C +C RE+ F
Sbjct: 1767 EQQDAYEFFTSLIDQMDEYLK--KMGREQ--IFKNTFQGIYSDQKICKDCPHRYEREEAF 1822
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1823 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPS 1876
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1877 VLVIHLMRFGFDWESGRSIKYDEQI 1901
Score = 88 (36.0 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+N++ Q L+M P ++ + D ++ S+ YQ+Q LF +L S +
Sbjct: 1694 TCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDD-SVFYQVQSLFGHLMESKLQYYVPENF 1752
Query: 62 TRSFGWESSDAW--QQHDIQELCRVLFDALETQFK 94
+ F + + + +Q D E L D ++ K
Sbjct: 1753 WKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLK 1787
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 142 (55.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 28/91 (30%), Positives = 49/91 (53%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
V L GH+ G+ + +P + SG+ D +++WN+ +Q CVQT + H G + + ++
Sbjct: 500 VGVLRGHRRGVWACSFNPFSRQ-LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI 558
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPL 256
G+Q +S D +K WS LS + + L
Sbjct: 559 SQGTQVVSAAADGLVKVWS--LSSGECVATL 587
Score = 140 (54.3 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 171 GHKDGIS--CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
GH IS C KH + SGA D V++W+L S + ++ H +R + F P G
Sbjct: 143 GHGGVISALCFGKHQNTW-VLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTG 201
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPL-HTXXXXXXXXXXXHQRKSKIFATCGDQCQL- 286
S LS D T++ W+ + + +P+ H+ Q + KI T G+ +
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNG---QPEEKILYTAGEGNLIL 258
Query: 287 -WEHERNEPIRAFSWNVDSLHH-----VQFNPIDKHILASCASDRSIIL 329
W+ + + VD+ H +Q P ++ L S SD S++L
Sbjct: 259 AWDWKSGSRLDP---GVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLL 304
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 138 SLHPFEGPREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE 197
S +PF ++ V + V L+GH I L + ++ + ++S A DG
Sbjct: 514 SFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLI-YISQGTQVVSAAADGL 572
Query: 198 VKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
VKVW+L+S CV T H+ V + DGS +S G D + W E
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEE 624
Score = 107 (42.7 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR----- 467
V L GH+ G+ + +P + SG+ D +++WN+ +Q CVQT + H G +
Sbjct: 500 VGVLRGHRRGVWACSFNPFSRQ-LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI 558
Query: 468 DTSTRPAVETTD-LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLIN 526
T+ D L + + S + D E RV AL ++F GS AD +
Sbjct: 559 SQGTQVVSAAADGLVKVWSLSSGECVATLDNHE-DRVW--ALASRFDGSLLVSGGADAVV 615
Query: 527 NLYQGKMRDYV 537
++++ +Y+
Sbjct: 616 SVWKDVTEEYI 626
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 35/157 (22%), Positives = 60/157 (38%)
Query: 355 IPRNIDPSLHPFEGPREYVRALNATKLERVFAKP-FVGPREYVRALN----ATKLERV-F 408
I N+ +H F G V A+ L+ V P F+ R L ++L + F
Sbjct: 395 IEDNVYKCIHVFTGHTASVTAVALGPLD-VNGYPTFLASSSQDRTLKRFNLGSQLNKSDF 453
Query: 409 AKPFVANLDGHKDGISCLAKHPTKLSTIISGA-YDGEVKVWNLTSQSCVQTYQAHDGHVR 467
+ V + H ++ + +K II+ A D +K+W+ ++ V + H V
Sbjct: 454 SNRAVWTIKAHDRDVNAI--QVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVW 511
Query: 468 DTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVL 504
S P + L G + W D Q+ + L
Sbjct: 512 ACSFNPF--SRQLASGSGDRTIRIWNV-DTQQCVQTL 545
>ZFIN|ZDB-GENE-061019-1 [details] [associations]
symbol:usp9 "ubiquitin specific peptidase 9"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-061019-1
SUPFAM:SSF48371 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:BX545856 IPI:IPI00998060
Ensembl:ENSDART00000122803 Uniprot:E7EXC7
Length = 2594
Score = 184 (69.8 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 46/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1673 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1728
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + +++++M +V+ + L+GAN Y C+KC KK D K
Sbjct: 1729 RYECEESFTTLNVDIRN------HQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1782
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1783 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1816
Score = 73 (30.8 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1564 TCYMNSVIQQLYMIPPIRNGI 1584
Score = 51 (23.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/96 (20%), Positives = 45/96 (46%)
Query: 101 DQADLI--NNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSL--HPFEGPREYVRALNATK 156
D +LI + L++V+ + D+ + I N+ P L + E +++++
Sbjct: 764 DDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSC---- 819
Query: 157 LERVFAK-PFVANLDGHKDGISCLAKHPTKLSTIIS 191
+R+ A + LDG KD I+C + ++ +++
Sbjct: 820 FDRLKASYDTLCVLDGDKDSINCARQEAIRMVRVLT 855
Score = 44 (20.5 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 37 (18.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP 117
+ E C+ + + ++TT DQA ++ N Q + NP
Sbjct: 1170 VAEACQPVVEGTIPVSPINQTTHDQALVLQNALQNIP-NP 1208
>UNIPROTKB|G5E630 [details] [associations]
symbol:LOC790347 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0070410 "co-SMAD binding"
evidence=IEA] [GO:0045177 "apical part of cell" evidence=IEA]
[GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=IEA] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0005737 GO:GO:0008234 GO:GO:0045177
GO:GO:0030509 GO:GO:0007179 GO:GO:0006511 GO:GO:0016579
GO:GO:0004221 GeneTree:ENSGT00650000093229 KO:K11840 OMA:NGTRPSE
CTD:8239 EMBL:DAAA02073613 EMBL:DAAA02073614 RefSeq:XP_002700253.1
RefSeq:XP_003584736.1 Ensembl:ENSBTAT00000050390 GeneID:507307
KEGG:bta:507307 NextBio:20868001 Uniprot:G5E630
Length = 2554
Score = 181 (68.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 74 (31.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPSIRNGI 1585
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
>RGD|1560056 [details] [associations]
symbol:Usp9x "ubiquitin specific peptidase 9, X-linked"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007179 "transforming growth factor beta
receptor signaling pathway" evidence=ISO] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISO] [GO:0030509 "BMP signaling
pathway" evidence=ISO] [GO:0045177 "apical part of cell"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 RGD:1560056 GO:GO:0005737
GO:GO:0008234 GO:GO:0045177 GO:GO:0030509 GO:GO:0007179
GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 OMA:NGTRPSE
IPI:IPI00204923 PRIDE:D3ZXB5 Ensembl:ENSRNOT00000004814
UCSC:RGD:1560056 ArrayExpress:D3ZXB5 Uniprot:D3ZXB5
Length = 2558
Score = 181 (68.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 74 (31.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPSIRNGI 1585
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
>MGI|MGI:894681 [details] [associations]
symbol:Usp9x "ubiquitin specific peptidase 9, X chromosome"
species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030509 "BMP signaling pathway" evidence=ISO]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0051301 "cell
division" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:894681 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0008234
GO:GO:0045177 GO:GO:0030509 GO:GO:0007179 GO:GO:0006511
GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11840 GO:GO:0070410
MEROPS:C19.017 CTD:8239 HOGENOM:HOG000231283 HOVERGEN:HBG073749
OrthoDB:EOG46HG8S EMBL:U67874 EMBL:AL669967 EMBL:Z78153
IPI:IPI00108388 PIR:T30850 RefSeq:NP_033507.2 UniGene:Mm.242646
IntAct:P70398 STRING:P70398 PhosphoSite:P70398 PaxDb:P70398
PRIDE:P70398 DNASU:22284 GeneID:22284 KEGG:mmu:22284
InParanoid:P70398 NextBio:302415 CleanEx:MM_USP9X
Genevestigator:P70398 GermOnline:ENSMUSG00000031010 Uniprot:P70398
Length = 2559
Score = 181 (68.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 74 (31.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPSIRNGI 1585
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAVRMVRVLT 855
>UNIPROTKB|O00507 [details] [associations]
symbol:USP9Y "Probable ubiquitin carboxyl-terminal
hydrolase FAF-Y" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0007179 "transforming growth
factor beta receptor signaling pathway" evidence=ISS] [GO:0030509
"BMP signaling pathway" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=TAS] [GO:0008234 "cysteine-type peptidase activity"
evidence=TAS] [GO:0004843 "ubiquitin-specific protease activity"
evidence=TAS] [GO:0070410 "co-SMAD binding" evidence=ISS]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0007283
GO:GO:0030509 GO:GO:0007179 GO:GO:0006511 GO:GO:0004843
GO:GO:0016579 GO:GO:0004221 MIM:415000 Orphanet:1646 eggNOG:COG5077
KO:K11840 GO:GO:0070410 CleanEx:HS_USP10 HOGENOM:HOG000231283
HOVERGEN:HBG073749 OrthoDB:EOG46HG8S EMBL:AF000986 EMBL:Y13618
EMBL:Y13619 EMBL:AC002531 IPI:IPI00744575 IPI:IPI00874074
RefSeq:NP_004645.2 UniGene:Hs.598540 ProteinModelPortal:O00507
SMR:O00507 IntAct:O00507 STRING:O00507 MEROPS:C19.028
PhosphoSite:O00507 PaxDb:O00507 PRIDE:O00507
Ensembl:ENST00000338981 GeneID:8287 KEGG:hsa:8287 UCSC:uc004fst.1
CTD:8287 GeneCards:GC0YP014813 HGNC:HGNC:12633 MIM:400005
neXtProt:NX_O00507 PharmGKB:PA37258 InParanoid:O00507 OMA:RNIATIN
PhylomeDB:O00507 GenomeRNAi:8287 NextBio:31053 Bgee:O00507
CleanEx:HS_USP9Y Genevestigator:O00507 GermOnline:ENSG00000114374
Uniprot:O00507
Length = 2555
Score = 180 (68.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1676 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-ILSKVLGGSFADQKICQGCPH 1731
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +++ + L+GAN Y C+KC KK D K
Sbjct: 1732 RYECEESFTTLNVDIRN------HQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKR 1785
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1786 LLIKKLPRVLAIQLKRFDYDWERECAIKFNDYFE 1819
Score = 75 (31.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN++
Sbjct: 1567 TCYMNSVIQQLYMIPSIRNSI 1587
Score = 40 (19.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 18/96 (18%), Positives = 44/96 (45%)
Query: 101 DQADLI--NNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGP--REYVRALNATK 156
D +LI + L++V+ ++ DE + I N+ P L + +++++
Sbjct: 765 DDLELIGLDYLWRVVIQSSDEIANRAIDLLKEIYTNLGPRLKANQVVIHEDFIQSC---- 820
Query: 157 LERVFAK-PFVANLDGHKDGISCLAKHPTKLSTIIS 191
+R+ A + DG K+ I+C + ++ +++
Sbjct: 821 FDRLKASYDTLCVFDGDKNSINCARQEAIRMVRVLT 856
Score = 39 (18.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP 117
+ E C+ + D + + ++ T DQA ++ + Q + NP
Sbjct: 1171 VAEACQPVVDGTDPITQINQVTHDQAVVLQSALQSIP-NP 1209
Score = 37 (18.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 185 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 217
+L ++ A D VK ++ S++C + ++ DG
Sbjct: 94 ELEVLLEAAIDLSVKGLDVKSEACQRFFR--DG 124
Score = 37 (18.1 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 432 KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464
+L ++ A D VK ++ S++C + ++ DG
Sbjct: 94 ELEVLLEAAIDLSVKGLDVKSEACQRFFR--DG 124
>UNIPROTKB|Q93008 [details] [associations]
symbol:USP9X "Probable ubiquitin carboxyl-terminal
hydrolase FAF-X" species:9606 "Homo sapiens" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=IDA] [GO:0007179 "transforming growth factor beta receptor
signaling pathway" evidence=IMP;TAS] [GO:0030509 "BMP signaling
pathway" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
[GO:0007292 "female gamete generation" evidence=TAS] [GO:0008234
"cysteine-type peptidase activity" evidence=TAS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0070410 "co-SMAD binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0045177
GO:GO:0000122 GO:GO:0030509 GO:GO:0007179 GO:GO:0006511
GO:GO:0006367 GO:GO:0004197 GO:GO:0007292 GO:GO:0016579
GO:GO:0004221 eggNOG:COG5077 KO:K11840 OMA:NGTRPSE EMBL:X98296
EMBL:AL391259 EMBL:AL109797 EMBL:AF070645 IPI:IPI00003964
IPI:IPI00221012 RefSeq:NP_001034679.2 RefSeq:NP_001034680.2
UniGene:Hs.77578 ProteinModelPortal:Q93008 DIP:DIP-27562N
IntAct:Q93008 MINT:MINT-5006529 STRING:Q93008 MEROPS:C19.017
PhosphoSite:Q93008 DMDM:81175100 PaxDb:Q93008 PRIDE:Q93008
Ensembl:ENST00000324545 Ensembl:ENST00000378308 GeneID:8239
KEGG:hsa:8239 UCSC:uc004dfb.3 UCSC:uc004dfc.3 CTD:8239
GeneCards:GC0XP040944 HGNC:HGNC:12632 HPA:CAB011618 MIM:300072
neXtProt:NX_Q93008 PharmGKB:PA37257 HOGENOM:HOG000231283
HOVERGEN:HBG073749 OrthoDB:EOG46HG8S PhylomeDB:Q93008 ChiTaRS:USP9X
GenomeRNAi:8239 NextBio:30989 ArrayExpress:Q93008 Bgee:Q93008
CleanEx:HS_USP9X Genevestigator:Q93008 GermOnline:ENSG00000124486
Uniprot:Q93008
Length = 2570
Score = 181 (68.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 74 (31.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPSIRNGI 1585
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD ++C + ++ +++
Sbjct: 833 LDGDKDSVNCARQEAVRMVRVLT 855
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD ++C + ++ +++
Sbjct: 833 LDGDKDSVNCARQEAVRMVRVLT 855
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 162 (62.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 51/162 (31%), Positives = 72/162 (44%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ GI CL TKL ISG+ D +KVWN + C+ TY H G V + F D
Sbjct: 385 LRGHESGIRCLQFDDTKL---ISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DA 439
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQC--QL 286
S S +D T+K W+ E +S + HT S+ + D C +L
Sbjct: 440 SILASGSVDKTVKIWNFE-DKSTFSLRGHTDWVNAVRVDTS----SRTVFSASDDCTVRL 494
Query: 287 WEHERNEPIRAFSWNVDSLHHVQFNP----IDKHILASCASD 324
W+ + IR F +V + V P ++H A C +D
Sbjct: 495 WDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHD-AECEND 535
Score = 102 (41.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
+L GH D ++ + + T T+ S + D V++W+L +++C++T+ H G V+ V LP
Sbjct: 463 SLRGHTDWVNAV-RVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPR 521
Query: 228 GSQF 231
+F
Sbjct: 522 EFEF 525
Score = 80 (33.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 392 PREYVR-ALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449
PR V AL++T +L + GH +G+ L + I+SGA D +K+W+
Sbjct: 579 PRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLR---IVSGAEDRMIKIWD 635
Query: 450 LTSQSCVQTYQAHDGHV 466
+ C +T+ H G V
Sbjct: 636 PRTGKCERTFTGHSGPV 652
>UNIPROTKB|E1BWJ5 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 CTD:8239 EMBL:AADN02011032
IPI:IPI00574592 RefSeq:XP_416773.2 UniGene:Gga.54508
Ensembl:ENSGALT00000026178 GeneID:418569 KEGG:gga:418569
NextBio:20821735 ArrayExpress:E1BWJ5 Uniprot:E1BWJ5
Length = 2552
Score = 181 (68.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 73 (30.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPAIRNGI 1585
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP 117
+ E C+ + + T ++ T DQA ++ N Q + NP
Sbjct: 1170 VAEACQPVVEGTSTVSPINQATHDQAVVLQNALQNIP-NP 1208
>UNIPROTKB|E1BWJ4 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 EMBL:AADN02011032 IPI:IPI00813472
Ensembl:ENSGALT00000026179 ArrayExpress:E1BWJ4 Uniprot:E1BWJ4
Length = 2553
Score = 181 (68.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1675 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1730
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1731 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1784
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1785 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1818
Score = 73 (30.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1566 TCYMNSVIQQLYMIPAIRNGI 1586
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP 117
+ E C+ + + T ++ T DQA ++ N Q + NP
Sbjct: 1170 VAEACQPVVEGTSTVSPINQATHDQAVVLQNALQNIP-NP 1208
>UNIPROTKB|E1C806 [details] [associations]
symbol:USP9X "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:NGTRPSE EMBL:AADN02011032
IPI:IPI00821347 Ensembl:ENSGALT00000036657 ArrayExpress:E1C806
Uniprot:E1C806
Length = 2556
Score = 181 (68.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1678 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-MLSKVLGGSFADQKICQGCPH 1733
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +V+ + L+GAN Y C+KC KK D K
Sbjct: 1734 RYECEESFTTLNVDIRN------HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKR 1787
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1788 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1821
Score = 73 (30.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1569 TCYMNSVIQQLYMIPAIRNGI 1589
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 169 LDGHKDGISCLAKHPTKLSTIIS 191
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 44 (20.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD I+C + ++ +++
Sbjct: 833 LDGDKDSINCARQEAIRMVRVLT 855
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP 117
+ E C+ + + T ++ T DQA ++ N Q + NP
Sbjct: 1170 VAEACQPVVEGTSTVSPINQATHDQAVVLQNALQNIP-NP 1208
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 145 (56.1 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 36/119 (30%), Positives = 54/119 (45%)
Query: 170 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS 229
+ H+D +SC+ P TI+SG++D +VK+W++ S C T H G+V V PDGS
Sbjct: 153 EAHQDWVSCIRFSPNT-PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGS 211
Query: 230 QFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
S G D W ELS + L + K + A D+ +W+
Sbjct: 212 LCASGGKDTFACLW--ELSSGKPLYKLEARNTINALAFSPN--KYWLSAATDDKIIIWD 266
Score = 120 (47.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 34/99 (34%), Positives = 44/99 (44%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH---DGH---V 219
V +L GH ++ +A P TIIS + D V VW LT +AH GH V
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 220 RDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHT 258
+DV DG LS DNT++ W S + HT
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHT 112
Score = 113 (44.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 417 DGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+ H+D +SC+ P TI+SG++D +VK+W++ S C T H G+V + P
Sbjct: 153 EAHQDWVSCIRFSPNT-PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISP 208
Score = 100 (40.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 168 NLDGHKDGIS-CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLP 226
+L GH + + H + + +SG++D +++W++T + ++ H V V F
Sbjct: 65 SLKGHSHFVQDVVISHDGQFA--LSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSS 122
Query: 227 DGSQFLSVGIDNTIKTWSS 245
D Q +S D TIK W++
Sbjct: 123 DNRQIISGSRDATIKVWNT 141
Score = 63 (27.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 418 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGH 465
GH + +A + IISG+ D +KVWN T C T + + H
Sbjct: 110 GHTQDVMSVA-FSSDNRQIISGSRDATIKVWN-TLGECKFTLEGPEAH 155
Score = 61 (26.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/125 (18%), Positives = 50/125 (40%)
Query: 215 HDGHVRDVCFLPDGSQ-FLSVGIDNTIKTWSSELSESDHIVP------LHTXXXXXXXXX 267
H+G V + P+ +S D T+ W +L+ +D P L
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVW--QLTPTDATSPGKAHRSLKGHSHFVQDVV 77
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
H + + + + +LW+ + R F + + V F+ ++ I++ + D +I
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISG-SRDATI 136
Query: 328 ILYDT 332
+++T
Sbjct: 137 KVWNT 141
Score = 41 (19.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 420 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453
++ I+ LA P K +S A D ++ +W+L ++
Sbjct: 239 RNTINALAFSPNKYW--LSAATDDKIIIWDLLTK 270
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 149 (57.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 32 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 90
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 91 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 150
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 151 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 207
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 208 L-DNTLKLWD 216
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/295 (19%), Positives = 123/295 (41%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH +S + P + S + D +K+W +T H + DV + D
Sbjct: 15 LAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
+ +S D T+K W ++S + L Q + + + ++W+
Sbjct: 74 NLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA-----TVLSRN--P 341
+ + ++ + D + V FN D ++ S + D ++DT + T++ + P
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKLER--VFAKPFVGPREYVRA 398
+++ + + + +D +L ++ + + ++ K E+ +FA V +++ +
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 399 LNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE--VKVW 448
+ L ++ K V L GH D + A HPT+ + I S A + + +K+W
Sbjct: 251 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 304
Score = 79 (32.9 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 228 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 285
Score = 58 (25.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 203 ILAATLDNTLKLWDYSKGKCLKTYTGH 229
>UNIPROTKB|F1LWH1 [details] [associations]
symbol:RGD1561481 "Protein RGD1561481" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001394 Pfam:PF00443
PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 IPI:IPI00564682
Ensembl:ENSRNOT00000042095 Ensembl:ENSRNOT00000056504
Uniprot:F1LWH1
Length = 173
Score = 166 (63.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 26 VHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ-NTSITH-----CLRGFSNTETL 79
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C++C K +AHK +K + P +L LHL RF + +HR KL+ +V
Sbjct: 80 CSEYKYYCEECRSKQEAHKRMK--KLPMILALHLKRFKY-MDQLHRYTKLSYRV 130
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 174 (66.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 60/239 (25%), Positives = 101/239 (42%)
Query: 20 NAVY-KWKYE-NDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRSFGWESSDAWQQHD 77
+A+Y K ++ N+ T + + QK+ + P++ D W + Q
Sbjct: 108 HAIYGKRNFDDNEATTSTDLKRKSQKIKERREDPGDPSILEGDGAYKGPWAGYGSEQSSS 167
Query: 78 IQELCRVLFDALET-QFKGSKTTGDQADLINNLYQVLSRNPDEYLRETK--TSIHRIPRN 134
E ++ +E+ K K T N L + P+ +K T +H+ R
Sbjct: 168 PLEYSE--YEEVESLDVKSEKDTESNNLGQNELLKEQLATPEVETHRSKEETILHK-DRL 224
Query: 135 IDPSLHPF-EGPREYVRALNATKLERV--FAKPFVANLDGHKDGISCLAKHPTKLSTIIS 191
D + P + L+ E+ K + GH GISCL P ++S
Sbjct: 225 FDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHTKGISCLRFFPISGHLLLS 284
Query: 192 GAYDGEVKVWNLT-SQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
G+ D ++K+W + +S ++T+Q H +RD+ F DG FLS D TIK W +EL +
Sbjct: 285 GSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGK 343
Score = 61 (26.5 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTII-SGAYDGEVKVWN 449
+A L H + +A HP + S + S DG +K W+
Sbjct: 521 MAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558
Score = 49 (22.3 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 430 PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST----RPAVETTDLTRSFG 485
P K + ++G D + +++ S VQ Y H G + + + V T+D +
Sbjct: 363 PDKPNEFLAGTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRF 422
Query: 486 WE 487
WE
Sbjct: 423 WE 424
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 159 (61.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 46/178 (25%), Positives = 78/178 (43%)
Query: 156 KLERVFAKPF--VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQ 213
KLE+ + K + GH DG++CL + L T G+YD +K+W + S CV+T
Sbjct: 364 KLEKNWRKGTHTIKTFTGHSDGVTCLQFNRKYLMT---GSYDTTIKIWKIDSGECVKTLT 420
Query: 214 AHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRK 273
H VR + F D + +S G+D+TIK W+ + H K
Sbjct: 421 GHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT----NK 474
Query: 274 SKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
S + + ++W H + + D ++HV+ + I S + D +I ++D
Sbjct: 475 SIVSGSADHTVRVW-HVDSRTCYTLRGHTDWVNHVKIHSASNTIF-SASDDTTIRMWD 530
Score = 144 (55.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 156 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 215
K+ ++ + V L GH G+ L KL ISG D +KVWN + C+ TY+ H
Sbjct: 406 KIWKIDSGECVKTLTGHTKGVRALVFDNQKL---ISGGLDSTIKVWNYHTGQCIATYRGH 462
Query: 216 DGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK 275
+ V V F +S D+T++ W + S + + + HT H +
Sbjct: 463 EDAVVSVDFT--NKSIVSGSADHTVRVWHVD-SRTCYTLRGHTDWVNHVKI---HSASNT 516
Query: 276 IFATCGDQC-QLWEHERNEPIRAFSWNVDSLHHV 308
IF+ D ++W+ NE I+ F +++ H+
Sbjct: 517 IFSASDDTTIRMWDMNSNECIKVFG-GMENNGHI 549
Score = 80 (33.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 400 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
N KL V + GH +G+ +A + IISGA+D +KVW+L + C+ T+
Sbjct: 648 NTIKLWDVATGKCIRTQFGHIEGVWSIAADTFR---IISGAHDRLIKVWDLQNGKCLHTF 704
Score = 56 (24.8 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 427 AKHPTKLST-IISGAYDGEVKVWNLTSQSCVQTYQAH 462
A P T ++ A D +K+W++ + C++T H
Sbjct: 631 ATTPNSYPTHFLTSALDNTIKLWDVATGKCIRTQFGH 667
>RGD|1359153 [details] [associations]
symbol:Usp18 "ubiquitin specific peptidase 18" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0019785
"ISG15-specific protease activity" evidence=ISO] [GO:0032020
"ISG15-protein conjugation" evidence=ISO] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 RGD:1359153 GO:GO:0035634 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5077 GO:GO:0032020 MEROPS:C19.030 CTD:11274
HOVERGEN:HBG054189 KO:K11846 OrthoDB:EOG4C2HBB GO:GO:0019785
IPI:IPI00464673 EMBL:BC079101 RefSeq:NP_001014080.1
UniGene:Rn.161758 ProteinModelPortal:Q6AYC7 STRING:Q6AYC7
GeneID:312688 KEGG:rno:312688 UCSC:RGD:1359153 InParanoid:Q6AYC7
NextBio:665148 ArrayExpress:Q6AYC7 Genevestigator:Q6AYC7
Uniprot:Q6AYC7
Length = 362
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 46/152 (30%), Positives = 75/152 (49%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV T+L + + + QHD L +++ + Q T D A+ + +L+
Sbjct: 110 SRQKAVLPTELVQCLQKYNVPLFVQHDAAHLFLTIWNLTKDQI----TDIDLAERLQDLF 165
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
+ + C+ CG E SR L + LP+ S + +A+R F +P+ L +++
Sbjct: 166 TIWTEESLMCVGCGAESSRRGKLLTLSLPLFDMDSK-PLKTLEDALRCFFQPKELASSDK 224
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
FC+ CGKK + K T FP LT+HLMRF
Sbjct: 225 CFCETCGKKTPCKQAQKLTGFPQTLTIHLMRF 256
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 62/314 (19%), Positives = 131/314 (41%)
Query: 153 NATKLERVFAKPFVA---NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 209
+AT+ + KP A L GH +S + P + S + D +K+W
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE 80
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX 269
+T H + DV + D + +S D T+K W ++S + L
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
Q + + + ++W+ + + ++ + D + V FN D ++ S + D +
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 197
Query: 330 YDTRA-----TVLSRN--PDEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKL 381
+DT + T++ + P +++ + + + +D +L ++ + + ++ K
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 382 ER--VFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTI 436
E+ +FA V +++ + + L ++ K V L GH D + A HPT+ + I
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NII 316
Query: 437 ISGAYDGE--VKVW 448
S A + + +K+W
Sbjct: 317 ASAALENDKTIKLW 330
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTGH 255
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 62/314 (19%), Positives = 131/314 (41%)
Query: 153 NATKLERVFAKPFVA---NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 209
+AT+ + KP A L GH +S + P + S + D +K+W
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE 80
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX 269
+T H + DV + D + +S D T+K W ++S + L
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
Q + + + ++W+ + + ++ + D + V FN D ++ S + D +
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 197
Query: 330 YDTRA-----TVLSRN--PDEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKL 381
+DT + T++ + P +++ + + + +D +L ++ + + ++ K
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 382 ER--VFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTI 436
E+ +FA V +++ + + L ++ K V L GH D + A HPT+ + I
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NII 316
Query: 437 ISGAYDGE--VKVW 448
S A + + +K+W
Sbjct: 317 ASAALENDKTIKLW 330
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTGH 255
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 62/314 (19%), Positives = 131/314 (41%)
Query: 153 NATKLERVFAKPFVA---NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 209
+AT+ + KP A L GH +S + P + S + D +K+W
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE 80
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX 269
+T H + DV + D + +S D T+K W ++S + L
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
Q + + + ++W+ + + ++ + D + V FN D ++ S + D +
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 197
Query: 330 YDTRA-----TVLSRN--PDEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKL 381
+DT + T++ + P +++ + + + +D +L ++ + + ++ K
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 382 ER--VFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTI 436
E+ +FA V +++ + + L ++ K V L GH D + A HPT+ + I
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NII 316
Query: 437 ISGAYDGE--VKVW 448
S A + + +K+W
Sbjct: 317 ASAALENDKTIKLW 330
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTGH 255
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 134 (52.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 62/314 (19%), Positives = 131/314 (41%)
Query: 153 NATKLERVFAKPFVA---NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCV 209
+AT+ + KP A L GH +S + P + S + D +K+W
Sbjct: 22 SATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFE 80
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX 269
+T H + DV + D + +S D T+K W ++S + L
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFN 138
Query: 270 HQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIIL 329
Q + + + ++W+ + + ++ + D + V FN D ++ S + D +
Sbjct: 139 PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 197
Query: 330 YDTRA-----TVLSRN--PDEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKL 381
+DT + T++ + P +++ + + + +D +L ++ + + ++ K
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 382 ER--VFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTI 436
E+ +FA V +++ + + L ++ K V L GH D + A HPT+ + I
Sbjct: 258 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NII 316
Query: 437 ISGAYDGE--VKVW 448
S A + + +K+W
Sbjct: 317 ASAALENDKTIKLW 330
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTGH 255
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 149 (57.5 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 62/313 (19%), Positives = 130/313 (41%)
Query: 154 ATKLERVFAKPFVA---NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQ 210
AT+ + KP A L GH +S + P + S + D +K+W +
Sbjct: 23 ATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEK 81
Query: 211 TYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXH 270
T H + DV + D + +S D T+K W ++S + L
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 271 QRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILY 330
Q + + + ++W+ + + ++ + D + V FN D ++ S + D ++
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIW 198
Query: 331 DTRA-----TVLSRN--PDEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKLE 382
DT + T++ + P +++ + + + +D +L ++ + + ++ K E
Sbjct: 199 DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 258
Query: 383 R--VFAKPFVGPREYVRALNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTII 437
+ +FA V +++ + + L ++ K V L GH D + A HPT+ + I
Sbjct: 259 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIA 317
Query: 438 SGAYDGE--VKVW 448
S A + + +K+W
Sbjct: 318 SAALENDKTIKLW 330
Score = 79 (32.9 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTGH 255
>ZFIN|ZDB-GENE-070705-213 [details] [associations]
symbol:usp46 "ubiquitin specific peptidase 46"
species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA;ISS] [GO:0016579 "protein
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0007610 "behavior"
evidence=IEA;ISS] [GO:0032228 "regulation of synaptic transmission,
GABAergic" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 ZFIN:ZDB-GENE-070705-213 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 EMBL:CT827859
GeneTree:ENSGT00650000093027 EMBL:CU693368 IPI:IPI00774667
Ensembl:ENSDART00000066678 Bgee:F1REW3 Uniprot:F1REW3
Length = 375
Score = 150 (57.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 36/115 (31%), Positives = 63/115 (54%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FLD+ + V +S+ + +R F ETL
Sbjct: 176 VHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ-NTSITH-----CLRDFSNTETL 229
Query: 585 DGANQYFCDKCGKKCDAHKG-LKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K L ++ P +L LHL RF + +HR KL+ +V
Sbjct: 230 CSEYKYYCEMCCSKQEAQKRRLVSSKIPKILALHLKRFKY-MEQLHRYTKLSYRV 283
Score = 79 (32.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 36/138 (26%), Positives = 55/138 (39%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 47 TCYCNSVLQALYFCRPFRENVLAYKVQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 104
Query: 60 DLTRSFGWESS--DAWQQHDIQELCRVLF----DALETQFKGSKTTGDQADLINNLYQVL 113
E+ D + Q D E L D L+ + K K G L NN +
Sbjct: 105 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGR---LKNNGTAIA 161
Query: 114 SRNPDEYLRETKTSIHRI 131
+ E + T +H I
Sbjct: 162 TDTEPEQNKIDPTWVHEI 179
>ZFIN|ZDB-GENE-050522-197 [details] [associations]
symbol:usp48 "ubiquitin specific peptidase 48"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-050522-197
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
GeneTree:ENSGT00630000089581 EMBL:CU928222 IPI:IPI00961174
Ensembl:ENSDART00000123591 Uniprot:E7EY58
Length = 1055
Score = 190 (71.9 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 47/165 (28%), Positives = 77/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + L ++ G D QQ D QE ++ LE K Q ++I +
Sbjct: 158 SNRRYIDPSGLVKALGL---DTGQQQDAQEFSKLFLSLLEDTLSKQKDPNLQ-NVIQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + ++ E + F++ E LDG N+
Sbjct: 214 CGQFSYVTVCNKCGRESPLPSRFYELELNIQ------GHKNLTECVTEFLKEEKLDGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
Y+C+ C K +A + +K P L LMRF FD + H+ KLN
Sbjct: 268 YYCESCQSKQNATRRIKLQSLPRTLNFQLMRFVFDRQSGHKKKLN 312
>UNIPROTKB|I3LMY9 [details] [associations]
symbol:USP9Y "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 OMA:NICHRYS EMBL:CU861572
EMBL:FP565652 EMBL:FP565925 RefSeq:XP_003360581.2
Ensembl:ENSSSCT00000029625 GeneID:100625207 KEGG:ssc:100625207
Uniprot:I3LMY9
Length = 2568
Score = 176 (67.0 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 44/154 (28%), Positives = 76/154 (49%)
Query: 486 W-ESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGT 544
W E + +QHD E L D+L+ + K G A +++ + G D C C
Sbjct: 1674 WGEPVNLREQHDALEFFNSLVDSLD---EALKALGHPA-VLSQVLGGSFADQKICQGCPH 1729
Query: 545 EKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKG 604
E++F + + +R + ++++++ +++ + L+GAN Y C+KC KK D K
Sbjct: 1730 RYECEESFTTLNVDIRN------HQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKR 1783
Query: 605 LKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKVE 638
L + P +L + L RFD+D+ IK ND E
Sbjct: 1784 LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFE 1817
Score = 72 (30.4 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NS+IQ L+M P RN +
Sbjct: 1565 TCYMNSVIQQLYMIPSIRNNI 1585
Score = 43 (20.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 78 IQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNI 135
+ E C + D + ++ T DQA ++ N Q + NP SI R+ + I
Sbjct: 1169 VAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIP-NPSSECMLRNISI-RLAQQI 1224
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 18/96 (18%), Positives = 44/96 (45%)
Query: 101 DQADLI--NNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPFEGP--REYVRALNATK 156
D +LI + L++V+ ++ D+ + I N+ P L + +++++
Sbjct: 763 DDLELIGLDYLWRVVMQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSC---- 818
Query: 157 LERVFAK-PFVANLDGHKDGISCLAKHPTKLSTIIS 191
+R+ A + LDG KD +C + ++ +++
Sbjct: 819 FDRLKASYDTLCILDGDKDSTNCARQEAIRMVRVLT 854
Score = 39 (18.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 416 LDGHKDGISCLAKHPTKLSTIIS 438
LDG KD +C + ++ +++
Sbjct: 832 LDGDKDSTNCARQEAIRMVRVLT 854
>UNIPROTKB|F1M722 [details] [associations]
symbol:Usp48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
RGD:735213 GO:GO:0005739 GO:GO:0005634 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 IPI:IPI00782270
Ensembl:ENSRNOT00000055944 ArrayExpress:F1M722 Uniprot:F1M722
Length = 1076
Score = 189 (71.6 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 182 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNVVQQQF 237
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 238 CGEYAYVTVCSQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDNR 291
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 292 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 336
>UNIPROTKB|Q86UV5 [details] [associations]
symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS51283 Prosite:PS00299 GO:GO:0005739 GO:GO:0005634
GO:GO:0008234 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0004221 eggNOG:COG5077 EMBL:AL590103 HSSP:P54578
EMBL:AL359815 MEROPS:C19.068 KO:K11858 CleanEx:HS_USP31 CTD:84196
HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC EMBL:AF502942 EMBL:AK000110
EMBL:AK002190 EMBL:AK026707 EMBL:AK026930 EMBL:BC007326
EMBL:BC013567 EMBL:BC067261 EMBL:BC103724 EMBL:BC104896
EMBL:AL834375 IPI:IPI00328815 IPI:IPI00414817 IPI:IPI00748485
IPI:IPI00786950 IPI:IPI00787034 IPI:IPI00787461 IPI:IPI00788045
RefSeq:NP_001027902.1 RefSeq:NP_115612.4 UniGene:Hs.467524
ProteinModelPortal:Q86UV5 SMR:Q86UV5 IntAct:Q86UV5 STRING:Q86UV5
PhosphoSite:Q86UV5 DMDM:74750436 PaxDb:Q86UV5 PRIDE:Q86UV5
Ensembl:ENST00000308271 Ensembl:ENST00000374732
Ensembl:ENST00000400301 Ensembl:ENST00000421625 GeneID:84196
KEGG:hsa:84196 UCSC:uc001bfa.3 UCSC:uc001bfb.3 UCSC:uc001bfc.3
UCSC:uc001bfd.1 UCSC:uc001bff.3 GeneCards:GC01M022004
HGNC:HGNC:18533 HPA:HPA030045 HPA:HPA030046 neXtProt:NX_Q86UV5
PharmGKB:PA134947522 InParanoid:Q86UV5 PhylomeDB:Q86UV5
ChiTaRS:USP48 GenomeRNAi:84196 NextBio:73598 ArrayExpress:Q86UV5
Bgee:Q86UV5 CleanEx:HS_USP48 Genevestigator:Q86UV5
GermOnline:ENSG00000090686 Uniprot:Q86UV5
Length = 1035
Score = 188 (71.2 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCNQCGRESKLLSKFYELELNIQ------GHKQLTDCISEFLKEEKLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|F1PG27 [details] [associations]
symbol:USP48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004221 GeneTree:ENSGT00630000089581
KO:K11858 CTD:84196 OMA:LSNWPED EMBL:AAEX03001778
RefSeq:XP_535372.2 Ensembl:ENSCAFT00000023542 GeneID:478198
KEGG:cfa:478198 Uniprot:F1PG27
Length = 1036
Score = 188 (71.2 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCNQCGRESKLLSKFYELELNIQ------GHKQLTDCISEFLKEEKLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|E1BF92 [details] [associations]
symbol:USP48 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 GO:GO:0005739 GO:GO:0005634
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
GeneTree:ENSGT00630000089581 OMA:LSNWPED EMBL:DAAA02006472
EMBL:DAAA02006473 IPI:IPI00707367 Ensembl:ENSBTAT00000009110
Uniprot:E1BF92
Length = 1038
Score = 188 (71.2 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCNQCGRESKLLSKFYELELNIQ------GHKQLTDCISEFLKEEKLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|B7ZKS7 [details] [associations]
symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004221 EMBL:AL590103 EMBL:AL359815
HOGENOM:HOG000231639 HOVERGEN:HBG080368 UniGene:Hs.467524
HGNC:HGNC:18533 ChiTaRS:USP48 OMA:LSNWPED EMBL:BC143354
IPI:IPI00977309 SMR:B7ZKS7 STRING:B7ZKS7 Ensembl:ENST00000529637
UCSC:uc001bfe.1 Uniprot:B7ZKS7
Length = 1047
Score = 188 (71.2 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCNQCGRESKLLSKFYELELNIQ------GHKQLTDCISEFLKEEKLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>MGI|MGI:2158502 [details] [associations]
symbol:Usp48 "ubiquitin specific peptidase 48" species:10090
"Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0045121
"membrane raft" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=ISO] InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 MGI:MGI:2158502 Prosite:PS00299
GO:GO:0005739 GO:GO:0005634 GO:GO:0008234 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077
HSSP:P54578 GeneTree:ENSGT00630000089581 MEROPS:C19.068 KO:K11858
CTD:84196 HOGENOM:HOG000231639 HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC
ChiTaRS:USP48 EMBL:AK220190 EMBL:AK133251 EMBL:AK166158
EMBL:BC021769 IPI:IPI00458122 IPI:IPI00647978 IPI:IPI00649325
IPI:IPI00788354 IPI:IPI00788425 RefSeq:NP_570949.2
UniGene:Mm.218478 ProteinModelPortal:Q3V0C5 SMR:Q3V0C5
PhosphoSite:Q3V0C5 PaxDb:Q3V0C5 PRIDE:Q3V0C5 DNASU:170707
Ensembl:ENSMUST00000055131 GeneID:170707 KEGG:mmu:170707
UCSC:uc008vjh.1 UCSC:uc008vji.1 UCSC:uc008vjj.1 OMA:LSNWPED
NextBio:370218 Bgee:Q3V0C5 CleanEx:MM_USP48 Genevestigator:Q3V0C5
GermOnline:ENSMUSG00000043411 Uniprot:Q3V0C5
Length = 1052
Score = 188 (71.2 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNVVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCNQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|F1NZX5 [details] [associations]
symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443 PROSITE:PS00973
PROSITE:PS50235 PROSITE:PS51283 SMART:SM00213 SMART:SM00695
GO:GO:0005739 GO:GO:0005634 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004221 GeneTree:ENSGT00630000089581
IPI:IPI00571210 OMA:LSNWPED EMBL:AADN02077372 EMBL:AADN02077373
EMBL:AADN02077374 Ensembl:ENSGALT00000022876 Uniprot:F1NZX5
Length = 989
Score = 187 (70.9 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 112 SKRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQKQF 167
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 168 CGEYAYVTVCNQCGRESKLVSKFYELELNIQ------GHKQLTDCITEFLKEEKLEGDNR 221
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 222 YFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 266
>UNIPROTKB|Q5ZM45 [details] [associations]
symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000626 InterPro:IPR001394 InterPro:IPR006615
InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00213
SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
GO:GO:0008234 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0004221 eggNOG:COG5077 HSSP:P54578 MEROPS:C19.068 KO:K11858
EMBL:AJ719539 IPI:IPI00571210 RefSeq:NP_001073211.1
UniGene:Gga.20232 ProteinModelPortal:Q5ZM45 GeneID:769457
KEGG:gga:769457 CTD:84196 HOGENOM:HOG000231639 HOVERGEN:HBG080368
InParanoid:Q5ZM45 OrthoDB:EOG4GF3DC NextBio:20919686 Uniprot:Q5ZM45
Length = 1033
Score = 187 (70.9 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 156 SKRRYIDPSGFVKALGL---DTGQQQDAQEFSKLFMSLLEDTLSKQKNP-DVRNIVQKQF 211
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 212 CGEYAYVTVCNQCGRESKLVSKFYELELNIQ------GHKQLTDCITEFLKEEKLEGDNR 265
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 266 YFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 310
>RGD|735213 [details] [associations]
symbol:Usp48 "ubiquitin specific peptidase 48" species:10116
"Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 RGD:735213
Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0045211
GO:GO:0008234 GO:GO:0045121 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077 HSSP:P54578
MEROPS:C19.068 KO:K11858 CTD:84196 HOGENOM:HOG000231639
HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC EMBL:AB073880 IPI:IPI00400620
RefSeq:NP_942080.1 UniGene:Rn.100022 ProteinModelPortal:Q76LT8
PhosphoSite:Q76LT8 PRIDE:Q76LT8 GeneID:362636 KEGG:rno:362636
UCSC:RGD:735213 NextBio:680703 ArrayExpress:Q76LT8
Genevestigator:Q76LT8 GermOnline:ENSRNOG00000013602 Uniprot:Q76LT8
Length = 1036
Score = 187 (70.9 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQESSKLFMSLLEDTLSKQKNP-DVRNVVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCSQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|Q76LT8 [details] [associations]
symbol:Usp48 "Ubiquitin carboxyl-terminal hydrolase 48"
species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
PROSITE:PS51283 RGD:735213 Prosite:PS00299 GO:GO:0005634
GO:GO:0005737 GO:GO:0045211 GO:GO:0008234 GO:GO:0045121
GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
eggNOG:COG5077 HSSP:P54578 MEROPS:C19.068 KO:K11858 CTD:84196
HOGENOM:HOG000231639 HOVERGEN:HBG080368 OrthoDB:EOG4GF3DC
EMBL:AB073880 IPI:IPI00400620 RefSeq:NP_942080.1 UniGene:Rn.100022
ProteinModelPortal:Q76LT8 PhosphoSite:Q76LT8 PRIDE:Q76LT8
GeneID:362636 KEGG:rno:362636 UCSC:RGD:735213 NextBio:680703
ArrayExpress:Q76LT8 Genevestigator:Q76LT8
GermOnline:ENSRNOG00000013602 Uniprot:Q76LT8
Length = 1036
Score = 187 (70.9 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S R ++ + ++ G D QQ D QE ++ LE K D +++ +
Sbjct: 158 SNRRYIDPSGFVKALGL---DTGQQQDAQESSKLFMSLLEDTLSKQKNP-DVRNVVQQQF 213
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
G+ C +CG E F ++ L ++ + + + + F++ E L+G N+
Sbjct: 214 CGEYAYVTVCSQCGRESKLVSKFYELELNIQ------GHKQLTDCISEFLKEERLEGDNR 267
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLN 634
YFC+ C K +A + ++ P L L LMRF FD T H+ KLN
Sbjct: 268 YFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLN 312
>UNIPROTKB|E2R587 [details] [associations]
symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:AAEX03009057
EMBL:AAEX03009058 Ensembl:ENSCAFT00000039391 Uniprot:E2R587
Length = 355
Score = 150 (57.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FL + + V S+ +R F ETL
Sbjct: 158 VHEIFQGTLTNETRCLNCETVSSKDEDFLALSVDVEQNTST-------HCLRDFSNTETL 210
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 211 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 263
Score = 74 (31.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPA--VETT 59
TCY NS++QAL+ FR V +K + +E +T L LF ++ T + +
Sbjct: 33 TCYCNSVLQALYFCRPFRENVLAYKAQQK-KKENLLTC-LADLFHSIATQKKKVGVIPPK 90
Query: 60 DLTRSFGWESS--DAWQQHDIQE----LCRVLFDALETQFKGSKTTG 100
E+ D + Q D E L + D L+ + K K G
Sbjct: 91 KFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 137
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 144 (55.7 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 62/295 (21%), Positives = 121/295 (41%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH +S + P + S + D +K+W +T H + DV + D
Sbjct: 68 LAGHTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
+S D T+K W ELS + L Q + + + ++W+
Sbjct: 127 RLLVSGSDDKTLKVW--ELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA-----TVLSRN--P 341
+ ++ + D + V FN D ++ S + D ++DT + T++ + P
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKLER--VFAKPFV-GPREYVR 397
+++ + + + +D +L ++ + + ++ K E+ +FA V G + V
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 398 AL--NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE--VKVW 448
N + + +K V L GH D + C A HPT+ + I S A + + +K+W
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE-NIIASAALENDKTIKLW 357
Score = 143 (55.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 45/191 (23%), Positives = 94/191 (49%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLA-KHPTKLSTIISGAYDGEVKVWN 202
E++ + +A KL +++ F + GHK GIS +A ++L ++SG+ D +KVW
Sbjct: 85 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL--LVSGSDDKTLKVWE 142
Query: 203 LTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXX 262
L++ ++T + H +V F P + +S D +++ W + +P H+
Sbjct: 143 LSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVS 202
Query: 263 XXXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILAS 320
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 203 AVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 259
Query: 321 CASDRSIILYD 331
D ++ L+D
Sbjct: 260 TL-DNTLKLWD 269
Score = 82 (33.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 418 GHKDGISCLAKH--PTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
GHK+ C+ + T I+SG+ D V +WNL S+ VQ Q H V T+ P
Sbjct: 281 GHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHP 338
Score = 58 (25.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 256 ILAATLDNTLKLWDYSKGKCLKTYTGH 282
>UNIPROTKB|F1SHQ7 [details] [associations]
symbol:USP18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035634 "response to stilbenoid" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0019785
"ISG15-specific protease activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0035634 GO:GO:0006511
GO:GO:0004221 GO:GO:0032020 GeneTree:ENSGT00630000089581
OMA:LYLTVWN GO:GO:0019785 EMBL:CU914454 Ensembl:ENSSSCT00000000838
Uniprot:F1SHQ7
Length = 321
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV+ +L + + QHD +L +++ ++ Q T D + LY
Sbjct: 62 SRQKAVQPMELAYCLQKYNIPMFVQHDAAQLYLTVWNLIKDQI----TDVDLVARLQALY 117
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
++++ CLEC TE R + L +PL + S + +A+ F +P L G ++
Sbjct: 118 TIRVKETFVCLECTTEHVRNSSMLTLPLSLFDMDSK-PLKTLEDALHCFFQPRELSGRDK 176
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
FC+ CG+K + LK + P LTLHLMRF
Sbjct: 177 CFCENCGRKTCWKQVLKLSRLPQTLTLHLMRF 208
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 149 (57.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 43/190 (22%), Positives = 95/190 (50%)
Query: 147 EYVRALNATKLERVFAK---PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 203
E++ + +A KL +++ F + GHK GIS +A + + ++S + D +K+W++
Sbjct: 58 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA-WSSDSNLLVSASDDKTLKIWDV 116
Query: 204 TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXX 263
+S C++T + H +V F P + +S D +++ W + + +P H+
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 264 XXXXXXHQRKSKIFATCGDQ-CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASC 321
++ S I ++ D C++W+ + ++ + + + V+F+P K+ILA+
Sbjct: 177 VHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 322 ASDRSIILYD 331
D ++ L+D
Sbjct: 234 L-DNTLKLWD 242
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 57/295 (19%), Positives = 123/295 (41%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH +S + P + S + D +K+W +T H + DV + D
Sbjct: 41 LAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
+ +S D T+K W ++S + L Q + + + ++W+
Sbjct: 100 NLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRA-----TVLSRN--P 341
+ + ++ + D + V FN D ++ S + D ++DT + T++ + P
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Query: 342 DEYLRETKTSIHRIPRNIDPSLHPFEGPR-EYVRALNATKLER--VFAKPFVGPREYVRA 398
+++ + + + +D +L ++ + + ++ K E+ +FA V +++ +
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 399 LNATKLERVF---AKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGE--VKVW 448
+ L ++ K V L GH D + A HPT+ + I S A + + +K+W
Sbjct: 277 GSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE-NIIASAALENDKTIKLW 330
Score = 73 (30.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
I+SG+ D V +WNL ++ VQ Q H V T+ P
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHP 311
Score = 58 (25.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
I++ D +K+W+ + C++TY H
Sbjct: 229 ILAATLDNTLKLWDYSKGKCLKTYTCH 255
>ZFIN|ZDB-GENE-030131-8414 [details] [associations]
symbol:pak1ip1 "PAK1 interacting protein 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0009968
"negative regulation of signal transduction" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8414
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0009968
GeneTree:ENSGT00390000001263 KO:K14830 CTD:55003
HOGENOM:HOG000007618 HOVERGEN:HBG082144 OrthoDB:EOG45MN5T
EMBL:AY391445 EMBL:BC049528 EMBL:BC066416 IPI:IPI00493745
RefSeq:NP_957239.2 UniGene:Dr.35443 ProteinModelPortal:Q6TNS2
STRING:Q6TNS2 Ensembl:ENSDART00000065338 GeneID:336470
KEGG:dre:336470 InParanoid:Q6TNS2 OMA:NDGFIKM NextBio:20811756
Bgee:Q6TNS2 Uniprot:Q6TNS2
Length = 368
Score = 147 (56.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 172 HKDG-ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
H DG ISCL + T S ++SG DG + VW+ C++T +AH G V + P G
Sbjct: 85 HHDGTISCLEFYGT--SHLLSGGQDGLICVWSTKKWECLKTIRAHKGQVTSLSVHPSGKL 142
Query: 231 FLSVGIDNTIKTWS 244
LSVG D T++TW+
Sbjct: 143 ALSVGTDKTLRTWN 156
Score = 77 (32.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 423 ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
ISCL K K S + G D V+++++TSQ CV ++AH+ V+
Sbjct: 212 ISCL-KF-LKNSLLAVGGDDESVRIYDVTSQKCVCEFKAHENRVK 254
Score = 45 (20.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 9/55 (16%), Positives = 25/55 (45%)
Query: 401 ATKLERVFAKPFVANLDGHKDGISCLAKH-PTKLSTIISGAYDGEVKVWNLTSQS 454
+ ++ V ++ V H++ + + +++ + DG +K+W L +S
Sbjct: 231 SVRIYDVTSQKCVCEFKAHENRVKAIESFMKDDFCVLVTASNDGFIKLWKLNLES 285
Score = 40 (19.1 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 22/81 (27%), Positives = 35/81 (43%)
Query: 400 NATKLERVFAKP-FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ-SCVQ 457
N K F K F + DG L K L +I S G++ N T++ +C+
Sbjct: 251 NRVKAIESFMKDDFCVLVTASNDGFIKLWK--LNLESIESPTLLGQL---NTTARLTCLC 305
Query: 458 TYQAHDGHVRDTSTRPAVETT 478
+ G ++T+ +PA TT
Sbjct: 306 VWMP--GETKETAEQPAQATT 324
>TAIR|locus:2090985 [details] [associations]
symbol:UBP25 "ubiquitin-specific protease 25"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008234 GO:GO:0006511 EMBL:AB022220 GO:GO:0004221
eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302673 EMBL:AY064992
EMBL:BT021128 IPI:IPI00539796 RefSeq:NP_566486.1 UniGene:At.6074
ProteinModelPortal:Q9FPS2 SMR:Q9FPS2 IntAct:Q9FPS2 MEROPS:C19.A13
PRIDE:Q9FPS2 EnsemblPlants:AT3G14400.1 GeneID:820662
KEGG:ath:AT3G14400 TAIR:At3g14400 HOGENOM:HOG000084095
InParanoid:Q9FPS2 OMA:SEKAYIL PhylomeDB:Q9FPS2
ProtClustDB:CLSN2688374 Genevestigator:Q9FPS2 Uniprot:Q9FPS2
Length = 661
Score = 169 (64.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 41/136 (30%), Positives = 67/136 (49%)
Query: 493 QQHDIQELCRVLFDALET---QFKGSKTTGDQA----DLINNLYQGKMRDYVKCLECGTE 545
+Q D E R + DA + K + G++ ++ ++ G ++ VKCL CG E
Sbjct: 113 RQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKEIFGGALQSQVKCLSCGAE 172
Query: 546 KSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGL 605
++ D +DI L + SSV E+++ F + E LDG N+Y C+ C K A K +
Sbjct: 173 SNKADEIMDISLEILQ-SSSVK-----ESLQKFFQSEILDGNNKYRCESCEKLVTARKQM 226
Query: 606 KFTEFPYLLTLHLMRF 621
+ P +L + L RF
Sbjct: 227 SILQAPNILVIQLKRF 242
Score = 62 (26.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYEN 29
TCYLNS++Q L TP N K+ +
Sbjct: 32 TCYLNSVLQCLTFTPPLANFCLTHKHSS 59
>UNIPROTKB|A6QPU0 [details] [associations]
symbol:USP18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 GeneTree:ENSGT00630000089581 HOGENOM:HOG000294166
HOVERGEN:HBG054189 EMBL:DAAA02013854 EMBL:BC149487 IPI:IPI00867313
UniGene:Bt.109609 STRING:A6QPU0 Ensembl:ENSBTAT00000053400
Uniprot:A6QPU0
Length = 277
Score = 173 (66.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV+ T+L + + QHD +L +++ ++ Q T D + LY
Sbjct: 62 SRKKAVQPTELAYCLQKYNIPMFVQHDAAQLYLTVWNLIKNQI----TDVDLVARLQALY 117
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
++++ CLEC +E SR + L +PL V + +A+ F +P+ L ++
Sbjct: 118 TIRLKESFVCLECTSEMSRNSSMLALPLSVFDMHWK-PLKTLEDALHCFFQPQELSSKDK 176
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
FC+ CG+K + L T P LT+HLMRF
Sbjct: 177 CFCESCGRKTLWKQVLTLTHLPQTLTIHLMRF 208
>UNIPROTKB|O57429 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
SMR:O57429 Uniprot:O57429
Length = 357
Score = 144 (55.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDI--IEAMRAFVRPE 582
+++L+ G+++ + C ECG + D F D+ LP+ G YG++ ++ +R F + +
Sbjct: 163 VSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKG----YGEVTLMDCLRLFTKED 218
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
LDG + C +C + K +FP +L LHL RF
Sbjct: 219 VLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRF 257
Score = 78 (32.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE----TSITYQLQKLFVNLQTST-RPAV 56
TC++NS++Q L T E R+ + +Y D+ T++ + KL L TS+ +V
Sbjct: 27 TCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWTSSPNDSV 86
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDAL 89
++ + + Q D QE R L D L
Sbjct: 87 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGL 121
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 492 WQQHDIQELCRVLFDAL 508
+ Q D QE R L D L
Sbjct: 105 YNQQDAQEFLRFLLDGL 121
>UNIPROTKB|F1NHV2 [details] [associations]
symbol:USP38 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 OMA:HYYSYAR EMBL:AADN02016244
IPI:IPI00603752 Ensembl:ENSGALT00000016070 Uniprot:F1NHV2
Length = 1039
Score = 119 (46.9 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
+ + + F+ PE L G N+Y+C+KC +A K ++ E P L L L+RF +D R
Sbjct: 717 VTDLLNYFLAPEILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIR 776
Query: 631 IKLNDKV 637
K+ D V
Sbjct: 777 RKILDSV 783
Score = 89 (36.4 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 32/95 (33%), Positives = 40/95 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQALFM +FR V S+ +LQ LF L + R A
Sbjct: 458 TCYMNSIIQALFMATDFRRHVLSLNLNGC----NSLMRKLQHLFAFLAHTQREAYAP--- 510
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQ 92
R F S W Q D E R L + L +
Sbjct: 511 -RIFLEASRPPWFTPQSQQDCSEYLRFLLNRLHEE 544
Score = 73 (30.8 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 509 ETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
E KGS ++ LI ++ GK++ + CL C + +E+ F D+ L P
Sbjct: 579 EALCKGS----EERTLIERMFGGKLKTTICCLNCKSTSQKEEAFTDLSLAFCP 627
>UNIPROTKB|F1P6T5 [details] [associations]
symbol:USP38 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 KO:K11854 CTD:84640 OMA:HYYSYAR
EMBL:AAEX03011691 RefSeq:XP_533279.2 Ensembl:ENSCAFT00000005820
GeneID:476071 KEGG:cfa:476071 Uniprot:F1P6T5
Length = 1037
Score = 138 (53.6 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 36/115 (31%), Positives = 54/115 (46%)
Query: 525 INNLYQGKMRDYVKCLE--CGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPE 582
+N G D C E C +S + ++ +P +P G S + + + F+ PE
Sbjct: 668 MNERMSGSPPDEFCCTENTCVPNESSK-ILVNKDVPQKPGGGSTP--SVTDLLNYFLAPE 724
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
L G NQY+C+ C +A K + TE P L L L+RF +D R K+ D V
Sbjct: 725 ILTGDNQYYCENCASLQNAEKTMHITEEPEYLILTLLRFSYDQKYHVRRKILDNV 779
Score = 97 (39.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 34/97 (35%), Positives = 41/97 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQALFM +FR V S+ +LQ LF L + R A
Sbjct: 453 TCYMNSVIQALFMATDFRRQVLSLNLNGC----NSLMKKLQHLFAFLAHTQREAYAP--- 505
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQFK 94
R F S W Q D E R L D L + K
Sbjct: 506 -RVFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK 541
Score = 77 (32.2 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 517 TTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSV 566
T+ + LI ++ GK+R ++ CL C + + + F D+ L P SSV
Sbjct: 578 TSDGEKTLIETMFGGKLRTHICCLNCRSTSQKVEAFTDLSLAFCP-SSSV 626
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 151 (58.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 44/170 (25%), Positives = 70/170 (41%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
N GH+D I+ L P+ I SG+ D V VWN+ QS + H V V F P
Sbjct: 13 NFKGHRDAITSLDFSPSG-KQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLW 287
S D T++ W + + HT Q S + A+ +LW
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ--SLLTASDDQSIKLW 129
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
R + I + + + +F+P D ++ S + DR++ L+D + L
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDASSRQL 178
Score = 147 (56.8 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHKD ++C+ P+ + S + D V++W + + ++AH G VR VCF DG
Sbjct: 58 GHKDAVTCVQFSPSA-HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQS 116
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHE 290
L+ D +IK WS + I L + + + +LW+
Sbjct: 117 LLTASDDQSIKLWS--VHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 291 RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
+ I F +V F+P +A+ +SD ++ ++D R L
Sbjct: 175 SRQLIHTFCEPGGYSSYVDFHP-SSTCIATASSDNTVRVWDIRTHTL 220
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 30/145 (20%), Positives = 67/145 (46%)
Query: 188 TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSEL 247
++++ + D +K+W++ Q + T + H+ VR F PDG +SV D T+K W +
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS- 174
Query: 248 SESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQC-QLWEHERNEPIRAFSWNVDSLH 306
S ++ H + I D ++W+ + ++ + + +++
Sbjct: 175 --SRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVN 232
Query: 307 HVQFNPIDKHILASCASDRSIILYD 331
+ F+P H+L + +SD ++ + D
Sbjct: 233 ALSFHPSGNHLLTA-SSDSTLKILD 256
Score = 72 (30.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
HP+ + I + + D V+VW++ + + +Q YQ H V S P+
Sbjct: 195 HPSS-TCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPS 239
Score = 53 (23.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 28/136 (20%), Positives = 55/136 (40%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETT 478
H ++ L+ HP+ + +++ + D +K+ +L + T H G S +
Sbjct: 227 HSAAVNALSFHPSG-NHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFS---RSG 282
Query: 479 DLTRSFGWESSD-AWQQH-DIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDY 536
D S G + W+ + D + RVL + + ++ +G D + G+ +
Sbjct: 283 DQFASAGSDQQVMVWRTNFDSVDYSRVLQQKRDHRTPSAQASGAAGDPESR--SGQKTEV 340
Query: 537 VKCLECGTEKS-REDT 551
L E+S RE T
Sbjct: 341 SPLLGVSAERSVREPT 356
>SGD|S000000163 [details] [associations]
symbol:UBP13 "Putative ubiquitin-specific protease that
cleaves Ub-protein fusions" species:4932 "Saccharomyces cerevisiae"
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0004843 "ubiquitin-specific protease activity"
evidence=TAS] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 SGD:S000000163 EMBL:BK006936
GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 KO:K11872
OrthoDB:EOG43XZCS eggNOG:COG5077 GeneTree:ENSGT00650000093027
EMBL:Z35828 PIR:S45803 RefSeq:NP_009486.3 ProteinModelPortal:P38187
SMR:P38187 DIP:DIP-795N IntAct:P38187 MINT:MINT-2783268
STRING:P38187 MEROPS:C19.100 PaxDb:P38187 EnsemblFungi:YBL067C
GeneID:852212 KEGG:sce:YBL067C CYGD:YBL067c HOGENOM:HOG000141813
OMA:IFGMENF NextBio:970718 Genevestigator:P38187 GermOnline:YBL067C
Uniprot:P38187
Length = 747
Score = 181 (68.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 38/115 (33%), Positives = 67/115 (58%)
Query: 523 DLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPE 582
+ I++L+QG + + +KCL C SR++ FLD P+ V+ G DI E ++++ + E
Sbjct: 472 NFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQ--GDEET--DIQEILKSYHQRE 527
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
L+G+N+++CD+C +A + + + P LTLHL RF + IKL + +
Sbjct: 528 MLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNI 582
Score = 48 (22.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKW 25
TCY NS++Q L+ R + ++
Sbjct: 148 TCYCNSVLQCLYNLSSLRENILQF 171
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 179 (68.1 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 54/206 (26%), Positives = 97/206 (47%)
Query: 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL-TSQSCVQTYQAHDGHVRD 221
K V GH G+S + P + ++S D +VK+W++ S C++TY H VRD
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 222 VCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIF-ATC 280
+CF DGS+FL+ G D IK W +E + I T K I A
Sbjct: 332 ICFSNDGSKFLTAGYDKNIKYWDTETGQV--ISTFSTGKIPYVVKLNPDDDKQNILLAGM 389
Query: 281 GDQCQL-WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSR 339
D+ + W+ E + + ++ +++ + F ++ + S + D+S+ +++ V+ +
Sbjct: 390 SDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTS-SDDKSLRVWEFGIPVVIK 448
Query: 340 NPDEYLRETKTSIHRIPRNIDPSLHP 365
Y+ E +H +P +I S+HP
Sbjct: 449 ----YISEPH--MHSMP-SI--SVHP 465
Score = 46 (21.3 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 429 HPTKLSTIISGAYDGEVKVWN 449
HP + S + + +DG +K W+
Sbjct: 553 HPLEQSKVATCGWDGLIKYWD 573
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 157 (60.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 158 ERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAH 215
ER F K V GH G++ L P +S + D ++K+W + Q V+TY H
Sbjct: 259 ERCFVPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGH 318
Query: 216 DGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK 275
VR+V F +G++FLS D +K W +E + HT K+
Sbjct: 319 KLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQ--RFHTGHVPYCLKYHPDDDKNH 376
Query: 276 IFATCGDQCQL--WEHERNEPIRAFSWNVDSLHHVQFNPIDKHI-LASCASDRSIILYD 331
+F ++ W+ E ++ + ++ +++ + F DK+ AS + D+S+ +++
Sbjct: 377 MFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITF--FDKNRRFASTSDDKSVRIWE 433
Score = 69 (29.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 418 GHKD-GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVE 476
GH G +C S +ISG DG++ +W+ + V ++AHD P +
Sbjct: 492 GHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEK 551
Query: 477 TTDLTRSFGWE 487
+ +T GW+
Sbjct: 552 SRMITA--GWD 560
Score = 62 (26.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 424 SCLAK--HPTKLSTIISGAYDGEVKVWN 449
+C+A HP + S +I+ +DG +K+WN
Sbjct: 540 TCIAALWHPHEKSRMITAGWDGLIKMWN 567
>UNIPROTKB|F6RZF3 [details] [associations]
symbol:USP18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035634 "response to stilbenoid" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0019785
"ISG15-specific protease activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0035634 GO:GO:0006511
GO:GO:0004221 GO:GO:0032020 GeneTree:ENSGT00630000089581
OMA:LYLTVWN GO:GO:0019785 EMBL:DAAA02013854 UniGene:Bt.109609
IPI:IPI00704482 Ensembl:ENSBTAT00000022157 NextBio:20871708
Uniprot:F6RZF3
Length = 320
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 470 STRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLY 529
S + AV+ T+L + + QHD +L +++ ++ Q T D + LY
Sbjct: 61 SRKKAVQPTELAYCLQKYNIPMFVQHDAAQLYLTVWNLIKNQI----TDVDLVARLQALY 116
Query: 530 QGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQ 589
++++ CLEC +E SR + L +PL V + +A+ F +P+ L ++
Sbjct: 117 TIRLKESFVCLECTSEMSRNSSMLALPLSVFDMHWK-PLKTLEDALHCFFQPQELSSKDK 175
Query: 590 YFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
FC+ CG+K + L T P LT+HLMRF
Sbjct: 176 CFCESCGRKTLWKQVLTLTHLPQTLTIHLMRF 207
>FB|FBgn0031187 [details] [associations]
symbol:CG14619 species:7227 "Drosophila melanogaster"
[GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
[GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IMP]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
InParanoid:Q8IQ27 Uniprot:Q8IQ27
Length = 938
Score = 135 (52.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 518 TGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEA-MR 576
T + L+ +L+ G+++ +KC CG D F D+ +P+ P S +EA +
Sbjct: 744 TRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPL-PSSSRCK----LEACLD 798
Query: 577 AFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
F+R E LDG C KC + K FP L +HL RF
Sbjct: 799 LFIREEVLDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRF 843
Score = 97 (39.2 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 30/112 (26%), Positives = 52/112 (46%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIA-EETSITYQLQKLFVNLQTSTRPAVETTD 60
TC++NS+IQ L T E + ++ ++ I ++ KL + T+ V +
Sbjct: 621 TCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWTANVHTVTPME 680
Query: 61 LTRSFGWES---SDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNL 109
L R+F + SD + Q D QE R D+L + S G+ ++ +NL
Sbjct: 681 LKRAFSTKHRMYSD-YNQQDAQEFLRFFLDSLHSALN-SGVKGETLNIDDNL 730
>CGD|CAL0004364 [details] [associations]
symbol:orf19.2026 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
site" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 CGD:CAL0004364 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 EMBL:AACQ01000031 KO:K11872
eggNOG:COG5077 MEROPS:C19.A62 RefSeq:XP_719475.1
ProteinModelPortal:Q5AD41 STRING:Q5AD41 GeneID:3638879
KEGG:cal:CaO19.2026 Uniprot:Q5AD41
Length = 700
Score = 167 (63.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 39/143 (27%), Positives = 73/143 (51%)
Query: 495 HDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLD 554
HD E L + + T D+ + +++++G + + KCL C S+++ FLD
Sbjct: 320 HDAHEFFNYLTNEIIESLNKEGFTNDK-NWCSDIFRGLITNETKCLSCEKITSKQELFLD 378
Query: 555 IPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLL 614
+ + + P G S A+ + A+ F + ETL N+++C+ C +A K +K + P +L
Sbjct: 379 LSIDIPP-GES-AFS-LSYALNNFSKSETLTHQNKFYCNTCSSLQEAVKTIKLKKLPEVL 435
Query: 615 TLHLMRFDFDYSTMHRIKLNDKV 637
++L RF +D +KL D +
Sbjct: 436 VINLKRFKYDEQMDKMVKLFDSI 458
Score = 60 (26.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 2 TCYLNSLIQALFMTPEFR 19
TCY NS++Q L+ T FR
Sbjct: 27 TCYCNSILQCLYYTESFR 44
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 138 (53.6 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 32/88 (36%), Positives = 44/88 (50%)
Query: 170 DGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
+GH +SC+ P TI+SG++D VKVWNLT+ + H G+V V PDG
Sbjct: 162 EGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDG 221
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPL 256
S S G D W +L+E + L
Sbjct: 222 SLCASGGKDGVTLLW--DLAEGKRLYSL 247
Score = 115 (45.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
+SG++DGE+++W+L++ + + HD V V F D Q +S D TIK W++ L E
Sbjct: 91 LSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRTIKLWNT-LGE 149
Query: 250 SDHIV 254
+ +
Sbjct: 150 CKYTI 154
Score = 105 (42.0 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 417 DGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+GH +SC+ P TI+SG++D VKVWNLT+ + H G+V + P
Sbjct: 162 EGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSP 219
Score = 62 (26.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS--QSCVQTYQAHD---------G 217
+ GH D ++ +A I+S + D + VW+LT+ Q+ + A + G
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTG 73
Query: 218 H---VRDVCFLPDGSQFLSVGIDNTIKTW 243
H V+DV DG LS D ++ W
Sbjct: 74 HSHFVQDVVLSSDGQFALSGSWDGELRLW 102
Score = 55 (24.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL 450
NL+GH ++ +A P S SG DG +W+L
Sbjct: 204 NLEGHGGYVNAVAVSPDG-SLCASGGKDGVTLLWDL 238
Score = 40 (19.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 437 ISGAYDGEVKVWNLTSQSCVQ 457
+ A +K+W+L S+ VQ
Sbjct: 265 LCAATQDSIKIWDLESKHIVQ 285
Score = 38 (18.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 434 STIISGAYDGEVKVWNLTSQS 454
ST+ +G DG ++++ ++ S
Sbjct: 311 STLYAGYTDGTIRIYKISGFS 331
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 142 (55.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 47/187 (25%), Positives = 80/187 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231
H D +S + HP + +IS ++D ++K+ ++ S +Q Y AHD V + P G
Sbjct: 229 HMDTVSQVLFHPDG-TCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFL 287
Query: 232 LSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWEH 289
S G D+ IK W +L + I L++ + FAT G Q C +W+
Sbjct: 288 ASAGSDSKIKIW--DLRQGRQIYTLYSNDKDITTVQF--NQSGDYFATGGSQNLCMVWKT 343
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRETK 349
F N+ ++ VQ + + ++ + + LY T+ N L +K
Sbjct: 344 N-------FDQNIQNIEQVQRSTVRQNDVEYSSGG----LY--AQTLFKTNKTASLSPSK 390
Query: 350 TSIHRIP 356
+I IP
Sbjct: 391 KTISIIP 397
Score = 135 (52.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 39/162 (24%), Positives = 72/162 (44%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D I+C P K+ + S + D V VWN Q + H G V V + PDG
Sbjct: 45 GHEDIITCADFDP-KMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGET 103
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQC-QLWEH 289
S G D I+ W + + I+ H + ++ D+ +LW
Sbjct: 104 IASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADG---GYLLSSSDDKTLKLWRL 160
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
+ + + +F+ + + + +P D ++AS + D++++L+D
Sbjct: 161 QDKKFMCSFAGHKNWVRSGVISP-DMRLVASGSDDKTVMLWD 201
Score = 122 (48.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDV 222
+PF GHK + C+ P TI S D ++++W T QS +AH G +R +
Sbjct: 81 RPF--KFVGHKGAVYCVKYSPDG-ETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSM 137
Query: 223 CFLPDGSQFLSVGIDNTIKTW 243
F DG LS D T+K W
Sbjct: 138 SFSADGGYLLSSSDDKTLKLW 158
Score = 92 (37.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
H D +S + HP + +IS ++D ++K+ ++ S +Q Y AHD V S P
Sbjct: 229 HMDTVSQVLFHPDG-TCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHP 282
Score = 79 (32.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462
KL R+ K F+ + GHK+ + P + + SG+ D V +W+L Q V Y
Sbjct: 156 KLWRLQDKKFMCSFAGHKNWVRSGVISPD-MRLVASGSDDKTVMLWDLNFQKIVSKYSTL 214
Query: 463 DGHVR 467
D +V+
Sbjct: 215 DDNVK 219
Score = 63 (27.2 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 12/61 (19%), Positives = 31/61 (50%)
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462
K+ + + + + + H ++ ++ HPT +G+ D ++K+W+L + T ++
Sbjct: 255 KITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGS-DSKIKIWDLRQGRQIYTLYSN 313
Query: 463 D 463
D
Sbjct: 314 D 314
>UNIPROTKB|E1BF70 [details] [associations]
symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
Uniprot:E1BF70
Length = 421
Score = 145 (56.1 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 38/132 (28%), Positives = 68/132 (51%)
Query: 495 HDIQELCRVLFDALETQFKGS-KTTGDQADLINNLYQGKMRDYVKCLECGTEKSRE-DTF 552
H+ R+ F L F+ S K +I L+QG+ + V+CL C +KSR + F
Sbjct: 194 HEDLNKVRLYFSKLRRLFRRSCKHKQLNESIIVALFQGQFKSTVQCLTCH-KKSRTFEAF 252
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + LP+ +S + + + +R F + E L N+++C C + D+ K ++ + P
Sbjct: 253 MYLSLPL----ASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPP 308
Query: 613 LLTLHLMRFDFD 624
+L +HL RF +D
Sbjct: 309 VLLVHLKRFSYD 320
Score = 76 (31.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET-SITYQLQKLFVNLQTSTRPAVETTD 60
TCY+NS++Q L TP + + Y++DI + + + L T + D
Sbjct: 103 TCYMNSILQCLCNTPHLADYFNRNCYQDDINRTCCEVAEEFGIIMKALWTGQYRYISPKD 162
Query: 61 LTRSFGWESSD--AWQQHDIQELCRVLFDAL 89
+ G + + Q D QEL L D L
Sbjct: 163 FKITIGKINDQFAGYSQQDSQELLLFLMDGL 193
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 144 (55.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 169 LDGHKDGISCLAK-HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH+ G++C+ H + IISGA D VK+W+ +++CVQT H +V VCF P+
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPE 240
Query: 228 GSQFLSVGIDNTIKTW 243
++ D+T++ W
Sbjct: 241 LPLIITGSEDSTVRLW 256
Score = 124 (48.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 32/165 (19%), Positives = 76/165 (46%)
Query: 174 DGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLS 233
D + C+ HP + + +++ Y+G V +WN +Q+ V++++ D VR F+P S ++
Sbjct: 16 DRVKCVDLHPVE-TWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVT 74
Query: 234 VGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQC-QLWEHERN 292
D I+ ++ E H H+ H + ++ D ++W+ +
Sbjct: 75 GSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVV---HPTLPYVISSSDDMLVKMWDWDNK 131
Query: 293 EPIR-AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATV 336
++ +F + + + NP D + A+ + D+++ ++ + V
Sbjct: 132 WAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNV 176
Score = 108 (43.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 416 LDGHKDGISCLAK-HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
L+GH+ G++C+ H + IISGA D VK+W+ +++CVQT DGH ++ S+
Sbjct: 181 LEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTL---DGHAQNVSS 234
Score = 79 (32.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449
K V LDGH +S + HP +L II+G+ D V++W+
Sbjct: 219 KTCVQTLDGHAQNVSSVCFHP-ELPLIITGSEDSTVRLWH 257
Score = 37 (18.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 276 IFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPID 314
+ ATC L + ++ A S N+ L + ID
Sbjct: 700 LLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDID 738
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 149 (57.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 170 DGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
+GH+D +SC+ P L TI+S ++D VKVWNL++ T H G+V V PDG
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 206
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPL 256
S S G D + W +L+E + L
Sbjct: 207 SLCASGGKDGVVLLW--DLAEGKKLYSL 232
Score = 113 (44.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 417 DGHKDGISCLAKHPTKLS-TIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
+GH+D +SC+ P L TI+S ++D VKVWNL++ T H G+V + P
Sbjct: 147 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 204
Score = 106 (42.4 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
+SG++DGE+++W+L + + + H V V F D Q +S D TIK W++ L E
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGE 137
Query: 250 SDHIV 254
+ +
Sbjct: 138 CKYTI 142
Score = 68 (29.0 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-----CVQTYQAHDGHVRDVCFLP 226
H D ++ +A I+S + D + +W LT + H V DV
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS 73
Query: 227 DGSQFLSVGIDNTIKTW 243
DG LS D ++ W
Sbjct: 74 DGQFALSGSWDGELRLW 90
Score = 55 (24.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 414 ANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462
+ L GH +S +A P S SG DG V +W+L + + +A+
Sbjct: 188 STLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Score = 49 (22.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 434 STIISGAYDGEVKVWNL 450
ST+ SG DG ++VW +
Sbjct: 308 STLFSGYTDGVIRVWGI 324
Score = 41 (19.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 437 ISGAYDGEVKVWNLTSQSCVQ 457
+ A + +K+W+L S+S V+
Sbjct: 250 LCAATEHGIKIWDLESKSIVE 270
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 136 (52.9 bits), Expect = 6.5e-10, Sum P(4) = 6.5e-10
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHKD ++ + P + + S + D V++W + ++AH VR V F DG Q
Sbjct: 58 GHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG-Q 115
Query: 231 FLSVGI-DNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLW 287
FL+ D +IK WS + + HT ++ +C + ++W
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD----GRLIVSCSEDKTIKIW 171
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
+ + + FS +V + V FNP I AS SD+++ ++D R L
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPSGTCI-ASAGSDQTVKVWDVRVNKL 220
Score = 122 (48.0 bits), Expect = 2.3e-08, Sum P(4) = 2.3e-08
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 117 PDEYLRETKTSIHRIP-RNIDPSLHPFEGPREYVRALNATKLERVFA---KPFVANLDGH 172
PD+ + ++ H P R++D F +++ + K +V++ + F+ +L H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVD-----FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRH 143
Query: 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232
+ C AK I+S + D +K+W+ T++ CV + G V F P G+
Sbjct: 144 THWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 202
Query: 233 SVGIDNTIKTWSSELSE 249
S G D T+K W +++
Sbjct: 203 SAGSDQTVKVWDVRVNK 219
Score = 116 (45.9 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 36/164 (21%), Positives = 64/164 (39%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHK I+ L P + + ++D + +WN + Y H V V F P G+
Sbjct: 16 GHKAAITSLDLSPNG-KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWE 288
S D T++ W + HT Q AT + ++W
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ----FLATASEDKSIKVWS 130
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
R + + + + +F+P D ++ SC+ D++I ++DT
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDT 173
Score = 80 (33.2 bits), Expect = 6.5e-10, Sum P(4) = 6.5e-10
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
H G++C++ HP+ + +I+ + DG +K+ +L + T Q H G V
Sbjct: 227 HSGGVNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Score = 68 (29.0 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
I S D VKVW++ +Q YQ H G V S P+
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Score = 42 (19.8 bits), Expect = 6.5e-10, Sum P(4) = 6.5e-10
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 89 LETQFKGSKTTGDQADLINNLYQVLSRNPDEYL 121
LE FKG K DL N Q+ + + D +L
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFL 42
Score = 41 (19.5 bits), Expect = 6.5e-10, Sum P(4) = 6.5e-10
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 505 FDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIP 556
FD+ T +T D+ + + +CL T+K ED D+P
Sbjct: 367 FDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTED-MSDLP 417
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 145 (56.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 170 DGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
DGHK+ +SC+ P T + TI+S ++D VKVWNL + + H G++ V PDG
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDG 205
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPL 256
S S G D I W +L+E + L
Sbjct: 206 SLCASGGKDGVILLW--DLAEGKKLYSL 231
Score = 110 (43.8 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 190 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
+SG++DGE+++W+L + + + H V V F D Q +S D TIK W++ L E
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGE 137
Query: 250 SDHIV 254
+ +
Sbjct: 138 CKYTI 142
Score = 108 (43.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 417 DGHKDGISCLAKHP-TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
DGHK+ +SC+ P T + TI+S ++D VKVWNL + + H G++ + P
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP 203
Score = 68 (29.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/92 (25%), Positives = 34/92 (36%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT----SQSCVQT-YQAHDGHVRDVCFLP 226
H D ++ +A I++ + D + +W LT S Q H V DV
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 227 DGSQFLSVGIDNTIKTWSSELSESDHIVPLHT 258
DG LS D ++ W E+ HT
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRRFVGHT 105
Score = 55 (24.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 277 FATCGD---QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
FA G + +LW+ E R F + + V F+ ++ I+ S + DR+I L++T
Sbjct: 77 FALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRTIKLWNT 134
Score = 50 (22.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 434 STIISGAYDGEVKVWNL 450
ST+ SG DG V+VW +
Sbjct: 307 STLFSGYTDGVVRVWGI 323
Score = 49 (22.3 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQA 461
+L GH ++ +A P S SG DG + +W+L + + +A
Sbjct: 188 SLVGHSGYLNTVAVSPDG-SLCASGGKDGVILLWDLAEGKKLYSLEA 233
Score = 42 (19.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 437 ISGAYDGEVKVWNLTSQSCVQ 457
+ A + +++W+L S+S V+
Sbjct: 249 LCAATENSIRIWDLESKSVVE 269
>UNIPROTKB|Q3ZCV1 [details] [associations]
symbol:USP38 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 EMBL:CH471056 GO:GO:0006511
GO:GO:0004221 HOGENOM:HOG000007432 HOVERGEN:HBG060424 KO:K11854
RefSeq:NP_115946.2 UniGene:Hs.480848 DNASU:84640 GeneID:84640
KEGG:hsa:84640 CTD:84640 HGNC:HGNC:20067 PharmGKB:PA134880611
ChiTaRS:USP38 GenomeRNAi:84640 NextBio:74575 OrthoDB:EOG4PRSPX
EMBL:AC099549 EMBL:AC116175 EMBL:BC039115 IPI:IPI00966895
STRING:Q3ZCV1 Ensembl:ENST00000510377 UCSC:uc003ija.4
Uniprot:Q3ZCV1
Length = 1004
Score = 133 (51.9 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 524 LINNLYQGKMRDYVKCLECGTEKSREDTFL-DIPLPVRPFGSSVAYGDIIEAMRAFVRPE 582
L+N G + C E + + + L + +P +P G + + + + F+ PE
Sbjct: 672 LVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVPQKPGGETTP--SVTDLLNYFLAPE 729
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
L G NQY+C+ C +A K ++ TE P L L L+RF +D R K+ D V
Sbjct: 730 ILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNV 784
Score = 97 (39.2 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 34/97 (35%), Positives = 41/97 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQALFM +FR V S+ +LQ LF L + R A
Sbjct: 453 TCYMNSVIQALFMATDFRRQVLSLNLNGC----NSLMKKLQHLFAFLAHTQREAYAP--- 505
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQFK 94
R F S W Q D E R L D L + K
Sbjct: 506 -RIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK 541
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 516 KTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGS 564
+T+ + LI ++ GK+R +++CL C + + + F D+ L P S
Sbjct: 577 RTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSS 625
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 130 (50.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 67/270 (24%), Positives = 111/270 (41%)
Query: 223 CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGD 282
C D + +S DNTIK W + + HT + K I +
Sbjct: 215 CLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQ----YDDKVIISGSSDS 270
Query: 283 QCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPD 342
++W+ E + + +++ H++FN ++ +C+ DRSI ++D + P
Sbjct: 271 TVRVWDVNTGEMVNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMTS------PS 321
Query: 343 EY-LRETKTSIHRIPRNI----DPSLHPFEGPR----------EYVRALNATKLERVFAK 387
E LR HR N+ + + G R E+VR LN K R A
Sbjct: 322 EITLRRVLVG-HRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHK--RGIAC 378
Query: 388 PFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEV 445
R V N+ +L + + L+GH++ + C+ + TK I+SGAYDG++
Sbjct: 379 LQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCI-RFDTK--RIVSGAYDGKI 435
Query: 446 KVWNL---------TSQSCVQTYQAHDGHV 466
KVW+L ++ C+ T H G V
Sbjct: 436 KVWDLVAALDPRAASNTLCLNTLVEHTGRV 465
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 365 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNSIRLWDIECGACLRVLEGHEELVRCIRF 421
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 422 --DTKRIVSGAYDGKIKVW 438
Score = 118 (46.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 39/161 (24%), Positives = 63/161 (39%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K I+SG D +K+W+ T CV+T H G V +C D +S
Sbjct: 212 GVYCLQYDDGK---IVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISG 266
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQR-KSKIFATCGDQCQLWEHERNE 293
D+T++ W E + + H H R + + TC + +
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVL-------HLRFNNGMMVTCSKDRSIAVWDMTS 319
Query: 294 PIRAFSWNVDSLHHVQFNPID--KHILASCASDRSIILYDT 332
P V H N +D + + S + DR+I ++ T
Sbjct: 320 PSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWST 360
Score = 105 (42.0 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 365 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNSIRLWDIECGACLRVLEGHEELVR 417
>UNIPROTKB|Q8NB14 [details] [associations]
symbol:USP38 "Ubiquitin carboxyl-terminal hydrolase 38"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 EMBL:CH471056 GO:GO:0006511
GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000007432
HOVERGEN:HBG060424 KO:K11854 EMBL:AK057992 EMBL:AK091712
EMBL:AK126943 EMBL:AL833976 EMBL:BC068975 EMBL:AB067478
EMBL:AF211481 IPI:IPI00168084 RefSeq:NP_115946.2 UniGene:Hs.480848
ProteinModelPortal:Q8NB14 IntAct:Q8NB14 STRING:Q8NB14
MEROPS:C19.056 PhosphoSite:Q8NB14 DMDM:38372866 PRIDE:Q8NB14
DNASU:84640 Ensembl:ENST00000307017 GeneID:84640 KEGG:hsa:84640
UCSC:uc003ijb.3 CTD:84640 GeneCards:GC04P144106 HGNC:HGNC:20067
HPA:HPA047948 neXtProt:NX_Q8NB14 PharmGKB:PA134880611
InParanoid:Q8NB14 OMA:HYYSYAR PhylomeDB:Q8NB14 ChiTaRS:USP38
GenomeRNAi:84640 NextBio:74575 ArrayExpress:Q8NB14 Bgee:Q8NB14
CleanEx:HS_USP38 Genevestigator:Q8NB14 Uniprot:Q8NB14
Length = 1042
Score = 133 (51.9 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 524 LINNLYQGKMRDYVKCLECGTEKSREDTFL-DIPLPVRPFGSSVAYGDIIEAMRAFVRPE 582
L+N G + C E + + + L + +P +P G + + + + F+ PE
Sbjct: 672 LVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVPQKPGGETTP--SVTDLLNYFLAPE 729
Query: 583 TLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLNDKV 637
L G NQY+C+ C +A K ++ TE P L L L+RF +D R K+ D V
Sbjct: 730 ILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNV 784
Score = 97 (39.2 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 34/97 (35%), Positives = 41/97 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY+NS+IQALFM +FR V S+ +LQ LF L + R A
Sbjct: 453 TCYMNSVIQALFMATDFRRQVLSLNLNGC----NSLMKKLQHLFAFLAHTQREAYAP--- 505
Query: 62 TRSFGWESSDAW----QQHDIQELCRVLFDALETQFK 94
R F S W Q D E R L D L + K
Sbjct: 506 -RIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEK 541
Score = 83 (34.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 516 KTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGS 564
+T+ + LI ++ GK+R +++CL C + + + F D+ L P S
Sbjct: 577 RTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSS 625
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 41/166 (24%), Positives = 67/166 (40%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
VA L+GH G++CL KL ISG+ D +++WN + C+ H V +C
Sbjct: 306 VALLEGHSSGVTCLQFDQCKL---ISGSMDKTIRIWNYRTSECISILHGHTDSV--LCLT 360
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQ 285
D + +S D T+K W S I L R + + +
Sbjct: 361 FDSTLLVSGSADCTVKLW--HFSGGKRIT-LRGHTGPVNSVRIIRDRGLVLSGSDDSTIK 417
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
+W E N + FS ++ + + D + SC+ D +I +D
Sbjct: 418 IWSLETNTCLHTFSAHIGPVQSLAL--ADSRLF-SCSLDGTIKQWD 460
Score = 126 (49.4 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH DG+ CL + + SG+YD +++WNL + V + H V C D
Sbjct: 269 LSGHSDGVMCLQ---LVRNILASGSYDATIRLWNLATFQQVALLEGHSSGV--TCLQFDQ 323
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHT 258
+ +S +D TI+ W+ SE I+ HT
Sbjct: 324 CKLISGSMDKTIRIWNYRTSECISILHGHT 353
Score = 122 (48.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 37/144 (25%), Positives = 63/144 (43%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
++ L GH D + CL T L +SG+ D VK+W+ + + T + H G V V +
Sbjct: 346 ISILHGHTDSVLCLTFDSTLL---VSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRII 401
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGD-QC 284
D LS D+TIK WS E + LHT S++F+ D
Sbjct: 402 RDRGLVLSGSDDSTIKIWSLETNTC-----LHTFSAHIGPVQSLALADSRLFSCSLDGTI 456
Query: 285 QLWEHERNEPIRAFSWNVDSLHHV 308
+ W+ E+ + + +++ + +
Sbjct: 457 KQWDIEKKKCVHTLFGHIEGVWEI 480
Score = 98 (39.6 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 32/125 (25%), Positives = 60/125 (48%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAWQQH 495
++SG+ D +K+W+L + +C+ T+ AH G V+ ++ D +R F +Q
Sbjct: 407 VLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQ------SLALAD-SRLFSCSLDGTIKQW 459
Query: 496 DIQEL-C-RVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLEC-GTEKSREDTF 552
DI++ C LF +E ++ D LI+ + G ++ + C EC T K+ +
Sbjct: 460 DIEKKKCVHTLFGHIEGVWE---IAADHLRLISGAHDGVVKVWEAC-ECVHTLKNHSEPV 515
Query: 553 LDIPL 557
+ L
Sbjct: 516 TSVAL 520
Score = 72 (30.4 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
++ L GH D + CL T L +SG+ D VK+W+ + + T + H G V
Sbjct: 346 ISILHGHTDSVLCLTFDSTLL---VSGSADCTVKLWHFSGGKRI-TLRGHTGPV 395
Score = 59 (25.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 434 STIISGAYDGEVKVWNLTSQSCVQTYQAH 462
S + S + DG +K W++ + CV T H
Sbjct: 445 SRLFSCSLDGTIKQWDIEKKKCVHTLFGH 473
Score = 48 (22.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW---NLTSQSCVQT 458
V L H + ++ +A + ++SG+ DG++ +W N ++S V T
Sbjct: 505 VHTLKNHSEPVTSVALGDCE---VVSGSEDGKIYLWLFNNAPNESPVST 550
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 140 (54.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 42/166 (25%), Positives = 71/166 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQF 231
H ++C A P T+++ + DG V VW S + H G V+ CF PDG
Sbjct: 25 HHGEVNCSAFSPDG-RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLI 83
Query: 232 LSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG--DQCQLWEH 289
S D++I+ W S+ H++ H SK A+ G + +WE
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPD----SKQLASGGWDKRAIVWEV 139
Query: 290 ERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT 335
+ + + DS+ F+P LA+ + D ++ ++D RA+
Sbjct: 140 QSGRRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLRAS 184
Score = 115 (45.5 bits), Expect = 0.0010, P = 0.0010
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
NL+GH ISCL + L + SG++D + VW T+ + + H V + F PD
Sbjct: 192 NLEGHTGNISCLCYSASGL--LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPD 249
Query: 228 GSQFLSVGIDNTIKTW 243
+ S G T+K W
Sbjct: 250 ELKLASAGYSRTVKVW 265
Score = 72 (30.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
NL+GH ISCL + L + SG++D + VW T+ + + H V + P
Sbjct: 192 NLEGHTGNISCLCYSASGL--LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP 248
Score = 68 (29.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQT 458
L GH ++ LA P +L + S Y VKVW+ + C++T
Sbjct: 234 LKGHTIWVNSLAFSPDELK-LASAGYSRTVKVWDCLTGKCLET 275
>DICTYBASE|DDB_G0292046 [details] [associations]
symbol:DDB_G0292046 "Ubiquitin carboxyl-terminal
hydrolase 34" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000626 InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 SMART:SM00213 dictyBase:DDB_G0292046
EMBL:AAFI02000187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
eggNOG:COG5077 RefSeq:XP_629788.1 ProteinModelPortal:Q54DT4
EnsemblProtists:DDB0184183 GeneID:8628465 KEGG:ddi:DDB_G0292046
InParanoid:Q54DT4 OMA:ISKECTH Uniprot:Q54DT4
Length = 3240
Score = 172 (65.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 47/145 (32%), Positives = 67/145 (46%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFL 553
Q D E +L + LE K Q ++ + G + + + EC RE+ FL
Sbjct: 2334 QMDAYEFFLLLLEKLEDLMKDMP----QKSILKESFGGVLTNQIISKECTHRSHREEPFL 2389
Query: 554 DIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYL 613
+ + V+ S I E+M +FV E L G N+Y C+ C + DA K + P
Sbjct: 2390 SLSMDVKNKRS------IAESMASFVDEEFLVGDNKYKCESCDSRVDAIKRTLIEKLPNT 2443
Query: 614 LTLHLMRFDFDYSTMHRIKLNDKVE 638
L LH+ RF+FD TM KLND E
Sbjct: 2444 LILHMKRFEFDLDTMRNNKLNDFYE 2468
Score = 66 (28.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY+NSL+Q L+ +P +N +
Sbjct: 2171 TCYMNSLLQQLYYSPYLKNGI 2191
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 223 CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLH 257
C L D +FL I TI + + +SD ++ L+
Sbjct: 675 CLLFDQVEFLYHKIHKTITSMKTSEFDSDLLLFLY 709
>UNIPROTKB|F1P9H5 [details] [associations]
symbol:USP46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
Pfam:PF00443 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 EMBL:AAEX03009057 EMBL:AAEX03009058
Ensembl:ENSCAFT00000003188 Uniprot:F1P9H5
Length = 201
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
++ ++QG + + +CL C T S+++ FL + + V S+ +R F ETL
Sbjct: 52 VHEIFQGTLTNETRCLNCETVSSKDEDFLALSVDVEQNTST-------HCLRDFSNTETL 104
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRI-KLNDKV 637
+Y+C+ C K +A K ++ + P +L LHL RF + +HR KL+ +V
Sbjct: 105 CSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKY-MEQLHRYTKLSYRV 157
>UNIPROTKB|E1BND0 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
PROSITE:PS50030 GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00650000093229 KO:K11840 CTD:23358 OMA:AIKRSYI
EMBL:DAAA02008817 EMBL:DAAA02008818 EMBL:DAAA02008819
EMBL:DAAA02008820 IPI:IPI00924167 RefSeq:XP_002686434.1
RefSeq:XP_002704027.1 Ensembl:ENSBTAT00000061043 GeneID:532257
KEGG:bta:532257 NextBio:20875646 Uniprot:E1BND0
Length = 2617
Score = 181 (68.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/145 (32%), Positives = 73/145 (50%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K DQ + N +QG D C +C RE+TF
Sbjct: 1767 EQQDAYEFFTSLIDQMDEYLK--KMGRDQ--IFKNTFQGIYSDQKICKDCPHRYEREETF 1822
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1823 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPS 1876
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1877 VLVIHLMRFGFDWESGRSIKYDEQI 1901
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 136 (52.9 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHKD ++ + P + + S + D V++W + ++AH VR V F DG Q
Sbjct: 58 GHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG-Q 115
Query: 231 FLSVGI-DNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLW 287
FL+ D +IK WS + + HT ++ +C + ++W
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD----GRLIVSCSEDKTIKIW 171
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
+ + + FS +V + V FNP I AS SD+++ ++D R L
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPSGTCI-ASAGSDQTVKVWDVRVNKL 220
Score = 122 (48.0 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 117 PDEYLRETKTSIHRIP-RNIDPSLHPFEGPREYVRALNATKLERVFA---KPFVANLDGH 172
PD+ + ++ H P R++D F +++ + K +V++ + F+ +L H
Sbjct: 89 PDKRGKFSEFKAHTAPVRSVD-----FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRH 143
Query: 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232
+ C AK I+S + D +K+W+ T++ CV + G V F P G+
Sbjct: 144 THWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 202
Query: 233 SVGIDNTIKTWSSELSE 249
S G D T+K W +++
Sbjct: 203 SAGSDQTVKVWDVRVNK 219
Score = 116 (45.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 36/164 (21%), Positives = 64/164 (39%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHK I+ L P + + ++D + +WN + Y H V V F P G+
Sbjct: 16 GHKAAITSLDLSPNG-KQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWE 288
S D T++ W + HT Q AT + ++W
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ----FLATASEDKSIKVWS 130
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
R + + + + +F+P D ++ SC+ D++I ++DT
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSEDKTIKIWDT 173
Score = 80 (33.2 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
H G++C++ HP+ + +++ + DG +K+ +L + T Q H G V
Sbjct: 227 HSGGVNCISFHPSD-NYLVTASSDGTLKILDLLEGRLIYTLQGHTGPV 273
Score = 68 (29.0 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
I S D VKVW++ +Q YQ H G V S P+
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 239
Score = 42 (19.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 89 LETQFKGSKTTGDQADLINNLYQVLSRNPDEYL 121
LE FKG K DL N Q+ + + D +L
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFL 42
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 151 (58.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 41/165 (24%), Positives = 76/165 (46%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQTYQAHDGHVRDVCFLPDG 228
GHKD ++C+ P+ + SG+ D V++W N+ +S V ++AH VR V F DG
Sbjct: 90 GHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNIKGESTV--FRAHTATVRSVHFCSDG 146
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
F++ D TIK WS+ + + L + + A+ +LW+
Sbjct: 147 QSFVTASDDKTIKVWSTHRQK--FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
E + ++ + + +V F+P + A+ D ++ ++D R
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCV-AAAGMDNTVKVWDVR 248
Score = 146 (56.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 37/163 (22%), Positives = 70/163 (42%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ++C+ + + SG+ D + VW++ QS + H V V F P G
Sbjct: 48 GHRDAVTCV-DFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 106
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWE 288
S D T++ W + + HT Q F T D ++W
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQS----FVTASDDKTIKVWS 162
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
R + + + S +++ + +F+P D ++ S + D+++ L+D
Sbjct: 163 THRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD 204
Score = 143 (55.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 138 SLHPFEGPREYVRALN--ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYD 195
S+H + +V A + K+ + F+ +L H + + C AK I+S + D
Sbjct: 139 SVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRC-AKFSPDGRLIVSASDD 197
Query: 196 GEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243
VK+W+ TS+ CV +Y H G V V F P G+ + G+DNT+K W
Sbjct: 198 KTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 68 (29.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
HP+ +G D VKVW++ + +Q YQ H V S P+
Sbjct: 227 HPSGTCVAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS 271
Score = 52 (23.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 400 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
N K+ V + + H ++ L+ HP+ + +++ + D +K+ +L + T
Sbjct: 240 NTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG-NYLVTASSDSTLKILDLMEGRLLYTL 298
Query: 460 QAHDG 464
H G
Sbjct: 299 HGHQG 303
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 136 (52.9 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 44/170 (25%), Positives = 75/170 (44%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHKD ++ + P + + S + D V++W + ++AH VR V F DG Q
Sbjct: 16 GHKDVVTSVQFSPHG-NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG-Q 73
Query: 231 FLSVGI-DNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLW 287
FL+ D +IK WS + + HT ++ +C + ++W
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD----GRLIVSCSEDKTIKIW 129
Query: 288 EHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVL 337
+ + + FS +V + V FNP I AS SD+++ ++D R L
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCI-ASAGSDQTVKVWDVRVNKL 178
Score = 122 (48.0 bits), Expect = 5.1e-08, Sum P(3) = 5.1e-08
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 117 PDEYLRETKTSIHRIP-RNIDPSLHPFEGPREYVRALNATKLERVFA---KPFVANLDGH 172
PD+ + ++ H P R++D F +++ + K +V++ + F+ +L H
Sbjct: 47 PDKRGKFSEFKAHTAPVRSVD-----FSADGQFLATASEDKSIKVWSMYRQRFLYSLYRH 101
Query: 173 KDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232
+ C AK I+S + D +K+W+ T++ CV + G V F P G+
Sbjct: 102 THWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA 160
Query: 233 SVGIDNTIKTWSSELSE 249
S G D T+K W +++
Sbjct: 161 SAGSDQTVKVWDVRVNK 177
Score = 95 (38.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 29/135 (21%), Positives = 51/135 (37%)
Query: 200 VWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTX 259
+WN + Y H V V F P G+ S D T++ W + HT
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 260 XXXXXXXXXXHQRKSKIFATCGDQ--CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHI 317
Q AT + ++W R + + + + +F+P D +
Sbjct: 62 PVRSVDFSADGQ----FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRL 116
Query: 318 LASCASDRSIILYDT 332
+ SC+ D++I ++DT
Sbjct: 117 IVSCSEDKTIKIWDT 131
Score = 80 (33.2 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
H G++C++ HP+ + +I+ + DG +K+ +L + T Q H G V
Sbjct: 185 HSGGVNCISFHPSG-NYLITASSDGTLKILDLLEGRLIYTLQGHTGPV 231
Score = 68 (29.0 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
I S D VKVW++ +Q YQ H G V S P+
Sbjct: 159 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS 197
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 505 FDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIP 556
FD+ T +T D+ + + +CL T+K ED D+P
Sbjct: 325 FDSTTTTETSGRTLPDKGEEACGYFLNPSLMSPECLPTTTKKKTED-MSDLP 375
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 178 (67.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 50/207 (24%), Positives = 96/207 (46%)
Query: 163 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTS-QSCVQTYQAHDGHVRD 221
K + N GH G++ + P ++S D VK+W+ + C+QTY H VRD
Sbjct: 294 KKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRD 353
Query: 222 VCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX-HQRKSKIFATC 280
+CF DG +FLS G D + W +E + I+ T K + F
Sbjct: 354 ICFSNDGRRFLSCGYDRQTRLWDTETGK---ILSSFTNGKIPYCIKFNPDDDKQEQFLCG 410
Query: 281 GDQCQL--WEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLS 338
G ++ W+ + N+ ++ + ++ +++ + F ++ + S + D+S+ ++D V+
Sbjct: 411 GSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTS-SDDKSLRVWDWGIPVVI 469
Query: 339 RNPDEYLRETKTSIHRIPRNIDPSLHP 365
+ Y+ + S+H +P +LHP
Sbjct: 470 K----YISDP--SMHSMPA---VALHP 487
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 413 VANLDGHKD---GISCLAKHPTKLSTIISGAYDGEVKVWN 449
+ ++ H + GI P+K++T +++ E+K+W+
Sbjct: 559 IKTINAHNNVCIGIEWAPLEPSKVATC---SWNNEIKLWD 595
>UNIPROTKB|E1C4I0 [details] [associations]
symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000097591 OMA:ALHSENP EMBL:AADN02023911
IPI:IPI00603557 Ensembl:ENSGALT00000005338 Uniprot:E1C4I0
Length = 1234
Score = 173 (66.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/132 (33%), Positives = 62/132 (46%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQAD----LINNLYQGKMRDYVKCLECGTEKSRE 549
Q D E R DA++ T D++ +I+ ++ G +R VKCL C
Sbjct: 190 QEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQIFGGFLRSRVKCLNCKAVSDTY 249
Query: 550 DTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTE 609
+ FLDIPL ++ S + +A+ FV+PE LDG N Y C KC K A K
Sbjct: 250 EAFLDIPLDIKTVSS------VTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRFTIHR 303
Query: 610 FPYLLTLHLMRF 621
+LT+ L RF
Sbjct: 304 SSNVLTISLKRF 315
Score = 54 (24.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 20/94 (21%), Positives = 38/94 (40%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE-----TSITYQLQKLFVNLQTSTRPAV 56
TC++NS +Q L TP N + ++ + ++ + ++ + +PA
Sbjct: 114 TCFINSALQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMETHINRVLCCAHDAIKPAF 173
Query: 57 ETTDLTRSFGWESSDAWQQHDIQELCRVLFDALE 90
+L R G + Q D E R DA++
Sbjct: 174 VVHELKR-IG-KHFRFGAQEDAHEFLRFTVDAMQ 205
>ZFIN|ZDB-GENE-041212-59 [details] [associations]
symbol:usp2a "ubiquitin specific peptidase 2a"
species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
Uniprot:E7FEC1
Length = 600
Score = 147 (56.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 505 FDALETQFKGSKTTG---DQADL-INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVR 560
FD L + KG K ++ D I +L+ G+++ + C ECG + D F D+ LP+
Sbjct: 388 FDHLPDEEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSECGYCSTVFDPFWDLSLPIA 447
Query: 561 PFGSSVAYGDI--IEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHL 618
G YG++ ++ MR F + + LDG + C +C + K +FP +L LHL
Sbjct: 448 KKG----YGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTVQKFPKILVLHL 503
Query: 619 MRF 621
RF
Sbjct: 504 KRF 506
Score = 73 (30.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 24/98 (24%), Positives = 41/98 (41%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEE----TSITYQLQKLFVNLQTSTRP-AV 56
TC++NS++Q L T R+ + D+ T++ + KL + TS+ AV
Sbjct: 276 TCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQTMWTSSSSEAV 335
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDALETQ 92
++ + + Q D QE R L D L +
Sbjct: 336 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 373
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 492 WQQHDIQELCRVLFDALETQ 511
+ Q D QE R L D L +
Sbjct: 354 YNQQDAQEFLRFLLDGLHNE 373
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 147 (56.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/89 (38%), Positives = 46/89 (51%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GHK+ I A + S ++S ++DG VKVWN+T+ + + H G V PDG
Sbjct: 1042 LKGHKEAIKDFAF--LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1099
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLH 257
S+F S D T K WS E S H + H
Sbjct: 1100 SRFSSTSADKTAKIWSFESSSVLHELKGH 1128
Score = 129 (50.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 41/192 (21%), Positives = 86/192 (44%)
Query: 147 EYVRALNATKLERVFAKPFVANLDGHKDGI--SCLAKHPTKLSTIISGAYDGEVKVWNLT 204
E++ + L R+ +P H+D + +C ++ ++++ GA D ++V+
Sbjct: 595 EWINKKSLKNLSRLVVRP-------HRDAVYHACFSRDRQRIASC--GA-DKTLQVFKAE 644
Query: 205 SQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXX 264
S + AHD + F D + D +K W+S + ++ HT
Sbjct: 645 SGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCC 704
Query: 265 XXXXXHQRKSKIFATCGDQC--QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322
++R + ATC D +LW+ + +V+++ H +F+P D +I ASC+
Sbjct: 705 QFN--NRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYI-ASCS 761
Query: 323 SDRSIILYDTRA 334
+D ++ L++ +
Sbjct: 762 TDGTVKLWNVHS 773
Score = 99 (39.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP-- 473
L GHK+ I A + S ++S ++DG VKVWN+T+ + + H G V + P
Sbjct: 1042 LKGHKEAIKDFAF--LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1099
Query: 474 ---AVETTDLT-RSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL-INNL 528
+ + D T + + +ESS + E C V A K T D+ D+ I ++
Sbjct: 1100 SRFSSTSADKTAKIWSFESSSVLHELKGHEAC-VRCSAFSPSNKLLATGDDKGDIRIWDI 1158
Query: 529 YQGKMRDYVKCLECGTEK 546
G++ + + E+
Sbjct: 1159 LTGELLHFCSSVTVDEEE 1176
Score = 87 (35.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 198 VKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245
+++WN+ S S V + H V V F DGS FL+ D TI+ W +
Sbjct: 863 IELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWET 910
Score = 79 (32.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 142 FEGPREYVRALNATKLERVFAKPFVANL---DGHKDGISCLAKHPTKLSTIISGAYDGE- 197
F +YV +A K +++ L + H + ++C + + +++ D
Sbjct: 664 FSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTY 723
Query: 198 VKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244
+K+W+L + C T H V F P+ S D T+K W+
Sbjct: 724 IKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 770
Score = 66 (28.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 401 ATKLERVFAKPFVANLDGHKDGIS-CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
A K+ R+ + + + ++ + C + T T+IS A+D ++VWN CV
Sbjct: 986 AIKVLRLLDGRVLTSREAYRTSVQHC--RFTTDCQTLISSAHDAVIQVWNWQLNECV-FL 1042
Query: 460 QAHDGHVRD 468
+ H ++D
Sbjct: 1043 KGHKEAIKD 1051
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
H ++ L+ P + SG Y +K W++T+ +QT+ + +++ P
Sbjct: 1179 HGGWVTDLSFSPDSKMLVSSGGY---LKWWDVTTGESLQTFYTNGTNLKSIHVSP 1230
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 147 (56.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/89 (38%), Positives = 46/89 (51%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GHK+ I A + S ++S ++DG VKVWN+T+ + + H G V PDG
Sbjct: 1043 LKGHKEAIKDFAF--LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1100
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLH 257
S+F S D T K WS E S H + H
Sbjct: 1101 SRFSSTSADKTAKIWSFESSSVLHELKGH 1129
Score = 129 (50.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 41/192 (21%), Positives = 86/192 (44%)
Query: 147 EYVRALNATKLERVFAKPFVANLDGHKDGI--SCLAKHPTKLSTIISGAYDGEVKVWNLT 204
E++ + L R+ +P H+D + +C ++ ++++ GA D ++V+
Sbjct: 596 EWINKKSLKNLSRLVVRP-------HRDAVYHACFSRDRQRIASC--GA-DKTLQVFKAE 645
Query: 205 SQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXX 264
S + AHD + F D + D +K W+S + ++ HT
Sbjct: 646 SGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCC 705
Query: 265 XXXXXHQRKSKIFATCGDQC--QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCA 322
++R + ATC D +LW+ + +V+++ H +F+P D +I ASC+
Sbjct: 706 QFN--NRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYI-ASCS 762
Query: 323 SDRSIILYDTRA 334
+D ++ L++ +
Sbjct: 763 TDGTVKLWNVHS 774
Score = 99 (39.9 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP-- 473
L GHK+ I A + S ++S ++DG VKVWN+T+ + + H G V + P
Sbjct: 1043 LKGHKEAIKDFAF--LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1100
Query: 474 ---AVETTDLT-RSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL-INNL 528
+ + D T + + +ESS + E C V A K T D+ D+ I ++
Sbjct: 1101 SRFSSTSADKTAKIWSFESSSVLHELKGHEAC-VRCSAFSPSNKLLATGDDKGDIRIWDI 1159
Query: 529 YQGKMRDYVKCLECGTEK 546
G++ + + E+
Sbjct: 1160 LTGELLHFCSSVTVDEEE 1177
Score = 87 (35.7 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 198 VKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSS 245
+++WN+ S S V + H V V F DGS FL+ D TI+ W +
Sbjct: 864 IELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWET 911
Score = 79 (32.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/107 (21%), Positives = 44/107 (41%)
Query: 142 FEGPREYVRALNATKLERVFAKPFVANL---DGHKDGISCLAKHPTKLSTIISGAYDGE- 197
F +YV +A K +++ L + H + ++C + + +++ D
Sbjct: 665 FSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTY 724
Query: 198 VKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWS 244
+K+W+L + C T H V F P+ S D T+K W+
Sbjct: 725 IKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 771
Score = 66 (28.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 401 ATKLERVFAKPFVANLDGHKDGIS-CLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
A K+ R+ + + + ++ + C + T T+IS A+D ++VWN CV
Sbjct: 987 AIKVLRLLDGRVLTSREAYRTSVQHC--RFTTDCQTLISSAHDAVIQVWNWQLNECV-FL 1043
Query: 460 QAHDGHVRD 468
+ H ++D
Sbjct: 1044 KGHKEAIKD 1052
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
H ++ L+ P + SG Y +K W++T+ +QT+ + +++ P
Sbjct: 1180 HGGWVTDLSFSPDSKMLVSSGGY---LKWWDVTTGESLQTFYTNGTNLKSIHVSP 1231
>DICTYBASE|DDB_G0275415 [details] [associations]
symbol:DDB_G0275415 "putative ubiquitin
carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] InterPro:IPR000626 InterPro:IPR001394
InterPro:IPR016024 InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 SMART:SM00213
dictyBase:DDB_G0275415 SUPFAM:SSF48371 GO:GO:0008234
EMBL:AAFI02000013 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
GO:GO:0004221 eggNOG:COG5077 KO:K11853 RefSeq:XP_643687.1
ProteinModelPortal:Q553T4 EnsemblProtists:DDB0234113 GeneID:8619954
KEGG:ddi:DDB_G0275415 InParanoid:Q553T4 OMA:NNAYMLF Uniprot:Q553T4
Length = 2991
Score = 186 (70.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 50/156 (32%), Positives = 71/156 (45%)
Query: 480 LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKC 539
LT + + + Q D E +LFD LE K + Q L+ + + G +
Sbjct: 1459 LTYKYDGQPINTSIQMDADEFFNMLFDKLENTLKSTP----QEKLLKDFFGGSSVNQFIS 1514
Query: 540 LECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKC 599
EC RE+ F I + V+ +I E+++ FV ETLDG N+YFC C +K
Sbjct: 1515 QECNHVSEREEPFYTISVEVKN------KKEIQESLQLFVESETLDGDNKYFCSSCSQKV 1568
Query: 600 DAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKLND 635
A + P L +H RF+FD M R KLND
Sbjct: 1569 KALMRRCIKDLPNTLIIHNKRFEFDLDLMKRTKLND 1604
Score = 150 (57.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 2 TCYLNSLIQALFMTPEFR-NAVY-KWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETT 59
TCY+NSL+Q LFM P FR N + + KY + ++ S+ YQL+ +F NLQ S + + +
Sbjct: 1396 TCYINSLMQQLFMIPGFRYNIIQSEEKYNSPQEQQESLLYQLKIIFANLQESEKKSHDPK 1455
Query: 60 D--LTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGS 96
D LT + + + Q D E +LFD LE K +
Sbjct: 1456 DFCLTYKYDGQPINTSIQMDADEFFNMLFDKLENTLKST 1494
Score = 48 (22.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 46 VNLQTSTRPAVETTDLTRSFGWESSDAWQQHDIQELCRVLFDALETQFKGSKTTGDQADL 105
+N TR FG SSD++++H L V F + FK + +
Sbjct: 774 INYMLVTRCLSLVKKYLEEFGSRSSDSFKKH-FSPLITVRFSSQRNVFKFDVKSSES--- 829
Query: 106 INNLYQVLSRN 116
I + Q+L+ N
Sbjct: 830 IGTIKQMLAYN 840
Score = 47 (21.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 115 RNPDEYLRETKTSIHRIPRNIDPSLHP 141
+NP+E+L + ++P D ++ P
Sbjct: 747 KNPEEFLNTCMAKLSKVPIGNDSTMDP 773
Score = 47 (21.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 339 RNPDEYLRETKTSIHRIPRNIDPSLHP 365
+NP+E+L + ++P D ++ P
Sbjct: 747 KNPEEFLNTCMAKLSKVPIGNDSTMDP 773
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 301 NVDSLHHVQFNPIDKHILASCASDRSIILYD 331
++ SL + N ID H+L+ + I L++
Sbjct: 2911 SIKSLENSNDNQIDTHLLSLINALHQIQLFN 2941
>UNIPROTKB|F1SAF6 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
Length = 396
Score = 132 (51.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
I +L+ G+++ + C +CG + D F D+ LP+ G +++ MR F + + L
Sbjct: 202 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 259
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
DG + C +C + K FP +L LHL RF
Sbjct: 260 DGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 296
Score = 82 (33.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 27/98 (27%), Positives = 42/98 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNL-QT----STRPAV 56
TC++NS++Q L T E R+ + Y D++ +S L + F L QT S V
Sbjct: 66 TCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIWTSSPNDVV 125
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDALETQ 92
++ + + Q D QE R L D L +
Sbjct: 126 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 163
Score = 41 (19.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 492 WQQHDIQELCRVLFDALETQ 511
+ Q D QE R L D L +
Sbjct: 144 YNQQDAQEFLRFLLDGLHNE 163
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDVVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 104 (41.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L H + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLHRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 88 (36.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 33/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V DV +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDVVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 104 (41.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L H + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLHRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 88 (36.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 33/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V DV +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|E1BZL0 [details] [associations]
symbol:Gga.10597 "Ubiquitin carboxyl-terminal hydrolase"
species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0006511 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:AIKRSYI EMBL:AADN02012533
EMBL:AADN02012534 EMBL:AADN02012535 EMBL:AADN02012536
IPI:IPI00810957 Ensembl:ENSGALT00000017568 ArrayExpress:E1BZL0
Uniprot:E1BZL0
Length = 2612
Score = 178 (67.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 47/145 (32%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K DQ + N +QG D C +C RE+ F
Sbjct: 1762 EQQDAYEFFTSLIDQMDEYLK--KIGRDQ--IFKNTFQGIFSDQKICKDCPHRYEREEAF 1817
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1818 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKVLPN 1871
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
LL +HLMRF FD+ + IK ++++
Sbjct: 1872 LLVIHLMRFGFDWESGRSIKYDEQI 1896
>UNIPROTKB|E9PPM2 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
Length = 362
Score = 132 (51.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
I +L+ G+++ + C +CG + D F D+ LP+ G +++ MR F + + L
Sbjct: 168 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 225
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
DG + C +C + K FP +L LHL RF
Sbjct: 226 DGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRF 262
Score = 79 (32.9 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAE----ETSITYQLQKLFVNLQTST-RPAV 56
TC++NS++Q L T E R+ + Y D+ T++ + KL + TS+ V
Sbjct: 32 TCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDVV 91
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDALETQ 92
++ + + Q D QE R L D L +
Sbjct: 92 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 129
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 492 WQQHDIQELCRVLFDALETQ 511
+ Q D QE R L D L +
Sbjct: 110 YNQQDAQEFLRFLLDGLHNE 129
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 148 (57.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 40/165 (24%), Positives = 76/165 (46%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQTYQAHDGHVRDVCFLPDG 228
GHKD ++C+ P+ + SG+ D V++W N+ +S V ++AH VR V F DG
Sbjct: 59 GHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDG 115
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
F++ D T+K W++ + + L + + A+ +LW+
Sbjct: 116 QSFVTASDDKTVKVWATHRQK--FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
E + ++ + + +V F+P I A+ D ++ ++D R
Sbjct: 174 KSSRECVHSYCEHGGFVTYVDFHPSGTCI-AAAGMDNTVKVWDVR 217
Score = 142 (55.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ++C+ + SG+ D + VW++ QS + H V V F P G
Sbjct: 17 GHRDAVTCV-DFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWE 288
S D T++ W + + HT Q F T D ++W
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQS----FVTASDDKTVKVWA 131
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
R + + + S +++ + +F+P D ++ S + D+++ L+D
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD 173
Score = 142 (55.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 138 SLHPFEGPREYVRALNATKLERVFA---KPFVANLDGHKDGISCLAKHPTKLSTIISGAY 194
S+H + +V A + K +V+A + F+ +L H + + C AK I+S +
Sbjct: 108 SVHFCSDGQSFVTASD-DKTVKVWATHRQKFLFSLSQHINWVRC-AKFSPDGRLIVSASD 165
Query: 195 DGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTW 243
D VK+W+ +S+ CV +Y H G V V F P G+ + G+DNT+K W
Sbjct: 166 DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 70 (29.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
HP+ + I + D VKVW++ + +Q YQ H V S P+
Sbjct: 196 HPSG-TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS 240
Score = 50 (22.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 400 NATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTY 459
N K+ V + + H ++ L+ HP+ + +I+ + D +K+ +L + T
Sbjct: 209 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG-NYLITASSDSTLKILDLMEGRLLYTL 267
Query: 460 QAHDG 464
H G
Sbjct: 268 HGHQG 272
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 139 (54.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 46/203 (22%), Positives = 88/203 (43%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ ++ + HP S ++S + D +KVW+ + +T + H V+D+ F G
Sbjct: 104 LSGHRSPVTRVIFHPV-FSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
S D TIK W + E I +H + A+ ++WE
Sbjct: 163 KLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEYLRET 348
++ F+ + + + V+ N D +LASC++D+++ ++ V ++ LRE
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQ-DGTLLASCSNDQTVRVW----VVATKECKAELREH 275
Query: 349 KTSIHRI---PRNIDPSLHPFEG 368
+ + I P + P++ G
Sbjct: 276 EHVVECISWAPESAHPTISEATG 298
Score = 120 (47.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 162 AKPFVANLDGHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 220
A F L GH D + ++ T KL + S + D +K+W+ C++T HD +V
Sbjct: 139 AGDFERTLKGHTDSVQDISFDQTGKL--LASCSADMTIKLWDFQGFECIRTMHGHDHNVS 196
Query: 221 DVCFLPDGSQFLSVGIDNTIKTW 243
V +P+G +S D T+K W
Sbjct: 197 SVAIMPNGDHIVSASRDKTMKMW 219
Score = 82 (33.9 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 42/184 (22%), Positives = 84/184 (45%)
Query: 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEY 344
++WE ++ F+ + + + V+ N D +LASC++D+++ ++ V ++
Sbjct: 217 KMWEVATGYCVKTFTGHREWVRMVRPNQ-DGTLLASCSNDQTVRVW----VVATKECKAE 271
Query: 345 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLE-RVFAKPFVGPREYVRALNAT- 402
LRE + + I + S HP AT E + KP GP + + T
Sbjct: 272 LREHEHVVECISWAPE-SAHP--------TISEATGSENKKSGKP--GPFLLSGSRDKTI 320
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462
K+ + + L GH + + + HP ++S A D +++W+ ++ C++T AH
Sbjct: 321 KMWDISTGMCLMTLVGHDNWVRGVLFHPGG-RFVVSCADDKTLRIWDYKNKRCMKTLSAH 379
Query: 463 DGHV 466
+ V
Sbjct: 380 EHFV 383
Score = 73 (30.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
++SG+ D +K+W++++ C+ T HD VR P
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHP 348
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 16/77 (20%), Positives = 35/77 (45%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISG-AYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
V GH++ + + P + T+++ + D V+VW + ++ C + H+ V S
Sbjct: 227 VKTFTGHREWVRMV--RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISW 284
Query: 472 RPAVETTDLTRSFGWES 488
P ++ + G E+
Sbjct: 285 APESAHPTISEATGSEN 301
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448
K + L H+ ++ L H +++G+ D VKVW
Sbjct: 370 KRCMKTLSAHEHFVTSLDFHKAS-PYVVTGSVDQTVKVW 407
Score = 42 (19.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 18/108 (16%), Positives = 44/108 (40%)
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQ 285
G LS D TIK W ++S ++ L H + +C D +
Sbjct: 308 GPFLLSGSRDKTIKMW--DISTGMCLMTL-VGHDNWVRGVLFHPG-GRFVVSCADDKTLR 363
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+W+++ ++ S + + + F+ +++ D+++ +++ R
Sbjct: 364 IWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSV-DQTVKVWECR 410
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 145 (56.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 40/164 (24%), Positives = 71/164 (43%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH G+S + P S I SG DG VKVW ++ + T++ H + + + PDG
Sbjct: 172 LRGHLRGVSAVRFSPDA-SMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
+ S D TI+ W+ L+ H P + + + + LW+
Sbjct: 231 ATIASGSDDKTIRLWNV-LTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWD 289
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
+++ + D + + D ++ASCA+D + ++DT
Sbjct: 290 VRSARVMKSLPAHSDPVSGIDV-VWDGTLIASCATDGLVRIWDT 332
Score = 123 (48.4 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 40/182 (21%), Positives = 76/182 (41%)
Query: 154 ATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN-LTSQSCVQTY 212
A K+ + +GH GIS ++ P +TI SG+ D +++WN LT ++ +
Sbjct: 199 AVKVWAASTGKLIYTFEGHLAGISTISWSPDG-ATIASGSDDKTIRLWNVLTGKAHPTPF 257
Query: 213 QAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQR 272
H +V + F P G+ +S D + W + +P H+
Sbjct: 258 IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWD--- 314
Query: 273 KSKIFATCGDQ--CQLWEHERNEPIRAFSWNVDS-LHHVQFNPIDKHILASCASDRSIIL 329
+ A+C ++W+ + +R + + V+F+P K++LA D + L
Sbjct: 315 -GTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDD-CVRL 372
Query: 330 YD 331
+D
Sbjct: 373 WD 374
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/135 (20%), Positives = 58/135 (42%)
Query: 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVC 223
PF+ GH + + +A P K + ++SG+YD V +W++ S +++ AH V +
Sbjct: 256 PFI----GHHNYVYAIAFSP-KGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGID 310
Query: 224 FLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ 283
+ DG+ S D ++ W + + + +H K + T D
Sbjct: 311 VVWDGTLIASCATDGLVRIWDTSTGQCLRTL-VHEDNPPVSSVKFSPNGKYVLAWTLDDC 369
Query: 284 CQLWEHERNEPIRAF 298
+LW++ ++ +
Sbjct: 370 VRLWDYVEGRCLKTY 384
Score = 70 (29.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 437 ISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
+SG+ DG + W++ ++ +Q +AHDG V T
Sbjct: 416 VSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDT 450
Score = 55 (24.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAH 462
+++ D V++W+ C++TYQ H
Sbjct: 361 VLAWTLDDCVRLWDYVEGRCLKTYQGH 387
Score = 52 (23.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHD 463
I S A DG V++W+ ++ C++T D
Sbjct: 318 IASCATDGLVRIWDTSTGQCLRTLVHED 345
>UNIPROTKB|Q2UUG8 [details] [associations]
symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
creB" species:510516 "Aspergillus oryzae RIB40" [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0045013 "carbon catabolite repression of transcription"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AP007150 STRING:Q2UUG8
EnsemblFungi:CADAORAT00003788 GenomeReviews:AP007150_GR
Uniprot:Q2UUG8
Length = 754
Score = 150 (57.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 514 GSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIE 573
GSKT + ++ L++G + +CL C R++ FLD+ + + S +
Sbjct: 263 GSKTP-NTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSS------VTS 315
Query: 574 AMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKL 633
+R F E L N++ CD CG +A K +K P +L LHL RF + KL
Sbjct: 316 CLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKL 375
Query: 634 NDKV 637
+V
Sbjct: 376 FHRV 379
Score = 69 (29.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAE-ETSI--TYQLQKLFVNLQ 49
TCY NS++Q L+ + FR AV + I E ++ T + Q NL+
Sbjct: 62 TCYCNSILQCLYYSVPFREAVVNYPTRTPIESLEAALANTLRYQNFAANLE 112
>UNIPROTKB|B8NSV5 [details] [associations]
symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
creB" species:332952 "Aspergillus flavus NRRL3357" [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0045013 "carbon catabolite repression of transcription"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
KO:K11872 GO:GO:0045013 EMBL:EQ963483 RefSeq:XP_002383274.1
EnsemblFungi:CADAFLAT00011139 GeneID:7909143 KEGG:afv:AFLA_051480
Uniprot:B8NSV5
Length = 755
Score = 150 (57.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 514 GSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIE 573
GSKT + ++ L++G + +CL C R++ FLD+ + + S +
Sbjct: 264 GSKTP-NTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSS------VTS 316
Query: 574 AMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKL 633
+R F E L N++ CD CG +A K +K P +L LHL RF + KL
Sbjct: 317 CLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKL 376
Query: 634 NDKV 637
+V
Sbjct: 377 FHRV 380
Score = 69 (29.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAE-ETSI--TYQLQKLFVNLQ 49
TCY NS++Q L+ + FR AV + I E ++ T + Q NL+
Sbjct: 63 TCYCNSILQCLYYSVPFREAVVNYPTRTPIESLEAALANTLRYQNFAANLE 113
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 124 (48.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 168 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
+L GH+ +S + PT ++S + D +K W++++ CV T++ H+ VR + D
Sbjct: 186 SLKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISND 244
Query: 228 GSQFLSVGIDNTIKTWS 244
G+ F S +D T+ WS
Sbjct: 245 GTLFASASLDQTVTVWS 261
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 189 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELS 248
+ SG+ D +K WN+ + + T AH+ VR + F P G +SV D T++ W
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 249 ESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ-CQLWE 288
+ H HQ + D C++WE
Sbjct: 365 RCMKAIEAHEHFVSTVAF---HQTSPFVITGSVDMSCKVWE 402
Score = 108 (43.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNL-TSQSCVQTYQAHDGHVRDVCFLPD 227
L GH D ++ +A ++S + D +K+W+ + C+++ + H+ V V FLP
Sbjct: 144 LKGHTDAVNDIAIDAAG-KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPT 202
Query: 228 GSQFLSVGIDNTIKTW 243
G LS D+TIK W
Sbjct: 203 GDFVLSASRDHTIKQW 218
Score = 96 (38.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 164 PFVANLDGHKDGISCLAKHPTKLSTIISG-AYDGEVKVWNLTSQSCVQTYQAHDGHVRDV 222
P L GH+ I+ + HP L TI++ + D +KVW+ + +T + H V D+
Sbjct: 97 PETQKLTGHRLPITRVIFHP--LWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDI 154
Query: 223 CFLPDGSQFLSVGIDNTIKTW 243
G Q +S D +IK W
Sbjct: 155 AIDAAGKQLVSCSSDLSIKLW 175
Score = 88 (36.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTS---TRPAV 475
H++ + LA HP K +IS A D ++VW L++Q C++ +AH+ V + T P V
Sbjct: 331 HENWVRGLAFHP-KGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFV 389
Query: 476 ETTDLTRSFG-WE 487
T + S WE
Sbjct: 390 ITGSVDMSCKVWE 402
Score = 81 (33.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 415 NLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
+L GH+ +S + PT ++S + D +K W++++ CV T++ H+ VR
Sbjct: 186 SLKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVR 237
Score = 67 (28.6 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 363 LHPFEGPREYVRALNATKLERVFAKPFVGPREYVRALNATKLERVFAKPF---VANLDGH 419
++ F G ++VR + + +FA + V + ATK ++ + V ++
Sbjct: 226 VYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSF-ATKSAKLVLRDHEHAVECVEWA 284
Query: 420 KDGI--SCLAKHPTKLST--IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
D + + P ST + SG+ D +K WN+ + + T AH+ VR + P
Sbjct: 285 PDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHP 342
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 40/177 (22%), Positives = 76/177 (42%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+A L GH + C+ T T++SG YD VK+WN + C++T H+ V + F
Sbjct: 371 LATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFE 427
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG--DQ 283
+ S S +D +I+ W E V L Q + I +C
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVAL---LQGHTSLTSGMQLRGNILVSCNADSH 484
Query: 284 CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRN 340
++W+ + S + ++ +Q+ ++++A+ + D ++ L+D L R+
Sbjct: 485 VRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDIERGALIRD 539
Score = 118 (46.6 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 117 PDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF-AKPFVAN--LDGHK 173
PD +++ ++HR + + FE + R L A K+E+ + A P + + L GH+
Sbjct: 198 PD-HIQPCDLNVHRFLK-LQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAVLRGHE 255
Query: 174 DG-ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232
D I+C+ H +++G+ D +KVW + + T H G V G +
Sbjct: 256 DHVITCMQIHD---DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 233 SVGIDNTIKTWSSELSESDHIVPLHT 258
S D T+K WS+ H + HT
Sbjct: 313 SGSTDRTVKVWSTVDGSLLHTLQGHT 338
Score = 99 (39.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
+A L GH + C+ T T++SG YD VK+WN + C++T H+ V
Sbjct: 371 LATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Score = 70 (29.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT---SQSCVQTYQAH 462
+ L GH + + L ++ S + SG+ D ++VW+ T Q CV Q H
Sbjct: 411 IRTLTGHNNRVYSLL-FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
L GH + C+A S +++G+ D ++VW++ S + T H VR
Sbjct: 334 LQGHTSTVRCMAMAG---SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR 382
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 152 (58.6 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 40/177 (22%), Positives = 76/177 (42%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
+A L GH + C+ T T++SG YD VK+WN + C++T H+ V + F
Sbjct: 371 LATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFE 427
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG--DQ 283
+ S S +D +I+ W E V L Q + I +C
Sbjct: 428 SERSIVCSGSLDTSIRVWDFTRPEGQECVAL---LQGHTSLTSGMQLRGNILVSCNADSH 484
Query: 284 CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRN 340
++W+ + S + ++ +Q+ ++++A+ + D ++ L+D L R+
Sbjct: 485 VRVWDIHEGTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWDIERGALIRD 539
Score = 118 (46.6 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 39/146 (26%), Positives = 66/146 (45%)
Query: 117 PDEYLRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLERVF-AKPFVAN--LDGHK 173
PD +++ ++HR + + FE + R L A K+E+ + A P + + L GH+
Sbjct: 198 PD-HIQPCDLNVHRFLK-LQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAVLRGHE 255
Query: 174 DG-ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFL 232
D I+C+ H +++G+ D +KVW + + T H G V G +
Sbjct: 256 DHVITCMQIHD---DVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIV 312
Query: 233 SVGIDNTIKTWSSELSESDHIVPLHT 258
S D T+K WS+ H + HT
Sbjct: 313 SGSTDRTVKVWSTVDGSLLHTLQGHT 338
Score = 99 (39.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHV 466
+A L GH + C+ T T++SG YD VK+WN + C++T H+ V
Sbjct: 371 LATLHGHHAAVRCVQFDGT---TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRV 421
Score = 70 (29.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLT---SQSCVQTYQAH 462
+ L GH + + L ++ S + SG+ D ++VW+ T Q CV Q H
Sbjct: 411 IRTLTGHNNRVYSLL-FESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGH 462
Score = 66 (28.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
L GH + C+A S +++G+ D ++VW++ S + T H VR
Sbjct: 334 LQGHTSTVRCMAMAG---SILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR 382
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 145 (56.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 41/165 (24%), Positives = 75/165 (45%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQTYQAHDGHVRDVCFLPDG 228
GHKD ++C+ P+ + SG+ D V++W N+ +S V ++AH VR V F DG
Sbjct: 59 GHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDG 115
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
++ D T+K WS+ + L + + A+ +LW+
Sbjct: 116 QLLVTASDDKTVKVWSTHRQR--FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
E + ++ + + +V F+P I A+ D ++ ++DTR
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCI-AAAGMDNTVKVWDTR 217
Score = 143 (55.4 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
F+ +L H + + C AK I+S + D VK+W+ TS+ CV +Y H G V V F
Sbjct: 137 FLFSLTQHINWVRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDF 195
Query: 225 LPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHT 258
P G+ + G+DNT+K W + LH+
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHS 229
Score = 137 (53.3 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 34/163 (20%), Positives = 68/163 (41%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ++C+ + SG+ D + +W++ QS + H V V F P G
Sbjct: 17 GHRDAVTCV-DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQLWE 288
S D T++ W + + HT Q + T D ++W
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ----LLVTASDDKTVKVWS 131
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
R + + + +++ + +F+P D ++ S + D+++ L+D
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD 173
Score = 70 (29.7 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
HP+ + I + D VKVW+ + VQ YQ H V S P+
Sbjct: 196 HPSG-TCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPS 240
Score = 52 (23.4 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464
H ++ L+ HP+ + +I+ + D +K+ +L + T H G
Sbjct: 228 HSAAVNALSFHPSG-NYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 122 (48.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 32/128 (25%), Positives = 62/128 (48%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPRE-YVRALNATKLERVFAKPFVANLDGHKDG 175
DE + + ++ + +DP+L+ F R+ +R N + ++ P++A+++ H D
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWNVNQHKQ---DPYIASMEHHTDW 77
Query: 176 ISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVG 235
++ + T+IS + D VKVWN C+ T + H +V+ + + D S G
Sbjct: 78 VNDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAG 136
Query: 236 IDNTIKTW 243
+D I W
Sbjct: 137 LDRQIFLW 144
Score = 96 (38.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 416 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 206 LKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++WN+ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + ++ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT-VIVSGSTEKVLRVWDPR 198
>TAIR|locus:2114653 [details] [associations]
symbol:UBP26 "ubiquitin-specific protease 26"
species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0048316 "seed development" evidence=RCA;IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009790 "embryo development"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009880 "embryonic pattern specification"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045595 "regulation
of cell differentiation" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR001394
InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
Prosite:PS00299 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0008234 GO:GO:0048316 GO:GO:0006511
InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077
EMBL:AL132964 HSSP:P54578 EMBL:AF302674 IPI:IPI00546690 PIR:T46237
RefSeq:NP_566922.1 UniGene:At.22294 ProteinModelPortal:Q9SCJ9
SMR:Q9SCJ9 STRING:Q9SCJ9 MEROPS:C19.068 PaxDb:Q9SCJ9 PRIDE:Q9SCJ9
EnsemblPlants:AT3G49600.1 GeneID:824122 KEGG:ath:AT3G49600
TAIR:At3g49600 HOGENOM:HOG000090485 InParanoid:Q9SCJ9 KO:K11858
OMA:EECIGER Genevestigator:Q9SCJ9 Uniprot:Q9SCJ9
Length = 1067
Score = 120 (47.3 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 494 QHDIQELCRVLFDALETQFKGSKTTGDQAD-LINNLYQGKMRDYVKCLECGTEK---SRE 549
Q D E +L LE S G +A ++ +L+ G + C +CG + S+
Sbjct: 182 QQDTHEFLTLLLSLLERCLLHS---GVKAKTIVQDLFSGSVSHVTTCSKCGRDSEASSKM 238
Query: 550 DTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTE 609
+ F + L V+ S A ++ ++ E L+G NQYFC C + DA + +K
Sbjct: 239 EDFYALELNVKGLKSLDA------SLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRT 292
Query: 610 FPYLLTLHLMRFDFDYSTMHRIKL 633
P ++T L R F T + K+
Sbjct: 293 LPPVITFQLKRCIFLPKTTAKKKI 316
Score = 102 (41.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 26/89 (29%), Positives = 43/89 (48%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDL 61
TCY NS++Q L+M FR V+ E + ++ + Q+ +LF L S + V++
Sbjct: 114 TCYANSILQCLYMNTAFREGVFS--VEVHVLKQNPVLDQIARLFAQLHASQKSFVDSDAF 171
Query: 62 TRSFGWESSDAWQQHDIQELCRVLFDALE 90
++ E + QQ D E +L LE
Sbjct: 172 VKTL--ELDNGVQQ-DTHEFLTLLLSLLE 197
>UNIPROTKB|F1STW7 [details] [associations]
symbol:USP35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093027 EMBL:CU694636
Ensembl:ENSSSCT00000016247 OMA:SATHIRC Uniprot:F1STW7
Length = 497
Score = 127 (49.8 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 571 IIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHR 630
+++ + F+ PE L N+Y C+ C DA K ++ ++ P L L L+RF FD TM R
Sbjct: 295 VLDLVNYFLSPEKLTAENRYHCESCASLQDAEKVVELSQGPRYLILTLLRFSFDLRTMRR 354
Query: 631 IKLNDKV 637
K+ D V
Sbjct: 355 RKILDDV 361
Score = 64 (27.6 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 18 FRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD-LTRSFG-WESSDAWQQ 75
FR+ V + EN+ + +T +LQ LF L+ S RPA+ + L+ S+ W S Q
Sbjct: 2 FRHCVLRLT-ENN--SQPLMT-KLQWLFAFLEHSQRPAISPENFLSASWTPWFSPGT--Q 55
Query: 76 HDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRN-PDEYLRETKTSIHRI 131
D E + L D L + K TG + + L Q S + P+E + TS+ ++
Sbjct: 56 QDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSAPEEPPSPSSTSVEKM 106
Score = 63 (27.2 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 103 VEKMFGGKIVTRICCLRCLNVSSREEAFTDLSLAFPP 139
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 31 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 74
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 151 (58.2 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 142 FEGPREYVRALNATKLERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200
F+ P EY +E F K + GHK G+ + P + ++S + D +K+
Sbjct: 299 FQLPAEYKE--RDFMIEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKL 356
Query: 201 WNL-TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246
W++ S+SC++TY+ H V+DV F DGS FLS DN + W +E
Sbjct: 357 WSVYKSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTE 403
Score = 67 (28.6 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 415 NLDGHKDG-ISCLAKHPTKLSTIISGAYDGEVKVW 448
N+ HK+ I C+ HP K S + + ++DG +K+W
Sbjct: 584 NIKAHKNVCIDCVW-HPFKTSMLATASWDGTIKLW 617
Score = 38 (18.4 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 31/137 (22%), Positives = 53/137 (38%)
Query: 12 LFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRS-FGWESS 70
+F PEF N + + + I E + K N ++ETT + ++ F ++
Sbjct: 87 MFDNPEFHNILNRPQQGPSINEHYNFLKNENKNHYN------GSIETTFVNKNIFDYQ-- 138
Query: 71 DAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHR 130
+ Q ++ + AL+ +K + A IN +N E L K R
Sbjct: 139 --YNQFNVTGIAEN--PALKNYYKNNYANYLVAKNINE-----RKNMHEDLNFKKHKKKR 189
Query: 131 IPRNIDPSLHPFEGPRE 147
N D L ++GP E
Sbjct: 190 SKNNDDNMLDKYKGPWE 206
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 151 (58.2 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 142 FEGPREYVRALNATKLERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKV 200
F+ P EY +E F K + GHK G+ + P + ++S + D +K+
Sbjct: 299 FQLPAEYKE--RDFMIEENFPPKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKL 356
Query: 201 WNL-TSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSE 246
W++ S+SC++TY+ H V+DV F DGS FLS DN + W +E
Sbjct: 357 WSVYKSKSCIRTYKGHFKGVKDVLFDNDGSSFLSCSYDNNVIYWDTE 403
Score = 67 (28.6 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 415 NLDGHKDG-ISCLAKHPTKLSTIISGAYDGEVKVW 448
N+ HK+ I C+ HP K S + + ++DG +K+W
Sbjct: 584 NIKAHKNVCIDCVW-HPFKTSMLATASWDGTIKLW 617
Score = 38 (18.4 bits), Expect = 6.5e-09, Sum P(3) = 6.5e-09
Identities = 31/137 (22%), Positives = 53/137 (38%)
Query: 12 LFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTDLTRS-FGWESS 70
+F PEF N + + + I E + K N ++ETT + ++ F ++
Sbjct: 87 MFDNPEFHNILNRPQQGPSINEHYNFLKNENKNHYN------GSIETTFVNKNIFDYQ-- 138
Query: 71 DAWQQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHR 130
+ Q ++ + AL+ +K + A IN +N E L K R
Sbjct: 139 --YNQFNVTGIAEN--PALKNYYKNNYANYLVAKNINE-----RKNMHEDLNFKKHKKKR 189
Query: 131 IPRNIDPSLHPFEGPRE 147
N D L ++GP E
Sbjct: 190 SKNNDDNMLDKYKGPWE 206
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 149 (57.5 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GHK GI C+ P S A DG +K+W L SC++T++ HD V + F+ G+Q
Sbjct: 530 GHKRGIWCVQFSPVDQILATSSA-DGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQ 588
Query: 231 FLSVGIDNTIKTWSSELSE 249
LS G D +K W+ + +E
Sbjct: 589 LLSGGSDGLLKLWTIKTNE 607
Score = 120 (47.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 168 NLDGHKDGISCLAKHP--TKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
NL G + + HP ++L + S + D ++++W+L S CV H V + F
Sbjct: 147 NLKGSSGVVHLVEFHPDISRLQ-LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFT 205
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLH 257
DG+ +S G D W+ + ES +P++
Sbjct: 206 ADGNTLISSGRDKICMVWNLKTRESIRTIPIY 237
Score = 99 (39.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 390 VGPREYVRALNAT-KLERVFAKPFVANLD---GHKDGISCLAKHPTKLSTIISGAYDGEV 445
V P + + A + +L ++++ P + L GHK GI C+ P S A DG +
Sbjct: 498 VSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSA-DGTL 556
Query: 446 KVWNLTSQSCVQTYQAHDGHV 466
K+W L SC++T++ HD V
Sbjct: 557 KLWGLQDFSCLKTFEGHDASV 577
Score = 96 (38.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 29/113 (25%), Positives = 46/113 (40%)
Query: 187 STIIS-GAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGS--QFLSVGIDNTIKTW 243
ST+++ G D +K+W++ Q C + G V V F PD S Q S +D I+ W
Sbjct: 122 STLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
Query: 244 SSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHERNEPIR 296
+L+ S + L + I + C +W + E IR
Sbjct: 182 --DLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIR 232
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 69/302 (22%), Positives = 114/302 (37%)
Query: 166 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFL 225
VA LDGH ++ LA +T+IS D VWNL ++ ++T ++ V L
Sbjct: 189 VAVLDGHFSAVTSLA-FTADGNTLISSGRDKICMVWNLKTRESIRTIPIYES-VEAAVLL 246
Query: 226 PDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQ 285
P+ F +G+ LH K++ C
Sbjct: 247 PEQGDFSQLGVKKQ---------------GLHFLTAGSKGVL-------KVWEVATAACV 284
Query: 286 LWEHERNEPIRAFSWNVD-SLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRN---- 340
+ EP+ + + SL H P +++ + + + + +I+ YD + L +
Sbjct: 285 YSQPVPFEPVESEEEASEHSLTHCMLVP-ERNEIVTVSVEHNIVFYDAQTLQLRKQLAGY 343
Query: 341 PDEYLRETKT----SIHRIPRNIDPSLHPFEGPREYVRAL---NATKLER-VFAKP--FV 390
DE L + K H + P L FE + + L T L VF K FV
Sbjct: 344 NDEVL-DVKFLGPGDSHIVVATNSPQLKVFELSTSHCQILYGHTETILALDVFRKGLMFV 402
Query: 391 G--PREYVRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVW 448
+ +R K RV VA GH G+ ++ K S +++ + D +KVW
Sbjct: 403 SCAKDKSIRVWRMNKDGRVVC---VAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVW 459
Query: 449 NL 450
N+
Sbjct: 460 NI 461
Score = 85 (35.0 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 29/121 (23%), Positives = 54/121 (44%)
Query: 436 IISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS-DAWQQ 494
++SG DG +K+W + + CV+T H+ + T + D+ + +SS W+
Sbjct: 589 LLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTN---KQDDMVVTASSDSSITLWK- 644
Query: 495 HDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLD 554
D+ E+ + E Q K + + +L N L++ + Y+K L R T L
Sbjct: 645 -DVTEI-----EQEEAQAKREEQIMKEQELSNLLHEKR---YLKALGLAISLDRPHTVLT 695
Query: 555 I 555
+
Sbjct: 696 V 696
Score = 56 (24.8 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 275 KIFATCGDQ---CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILY 330
K+ AT G Q +LW + F+ + + VQF+P+D+ ILA+ ++D ++ L+
Sbjct: 503 KLIAT-GSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQ-ILATSSADGTLKLW 559
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 31/112 (27%), Positives = 44/112 (39%)
Query: 382 ERVFAKPFVGPRE--YVRALNATKLERVF--AKPFVANLDGHKDGISCLAKHPTKLSTII 437
+ V F+GP + V A N+ +L +VF + L GH + I L L +
Sbjct: 345 DEVLDVKFLGPGDSHIVVATNSPQL-KVFELSTSHCQILYGHTETILALDVFRKGLM-FV 402
Query: 438 SGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESS 489
S A D ++VW + V GH AV + L SF SS
Sbjct: 403 SCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVG---AVSCSRLKESFVVTSS 451
Score = 51 (23.0 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLST-IISGAYDGEVKVW 448
KL + V LDGH+D I L H K +++ + D + +W
Sbjct: 599 KLWTIKTNECVKTLDGHEDKIWGL--HTNKQDDMVVTASSDSSITLW 643
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH+ ++ + HP S ++S + D +KVW+ + +T + H V+D+ F G
Sbjct: 39 LSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
S D TIK W + E I +H + A+ ++WE
Sbjct: 98 KLLASCSADMTIKLWDFQGFEC--IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ ++ F+ + + + V+ N D ++ASC++D+++
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTV 193
Score = 126 (49.4 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 165 FVANLDGHKDGISCLA-KHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVC 223
F L GH D + ++ H KL + S + D +K+W+ C++T HD +V V
Sbjct: 77 FERTLKGHTDSVQDISFDHSGKL--LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVA 134
Query: 224 FLPDGSQFLSVGIDNTIKTW 243
+P+G +S D TIK W
Sbjct: 135 IMPNGDHIVSASRDKTIKMW 154
Score = 82 (33.9 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 50/209 (23%), Positives = 93/209 (44%)
Query: 285 QLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRATVLSRNPDEY 344
++WE + ++ F+ + + + V+ N D ++ASC++D+++ ++ V ++
Sbjct: 152 KMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVW----VVATKECKAE 206
Query: 345 LRETKTSIHRIPRNIDPSLHPFEGPREYVRALNATKLE-RVFAKPFVGPREYVRALNAT- 402
LRE + + I S P E Y AT E + KP GP + + T
Sbjct: 207 LREHEHVVECI------SWAP-ES--SYSSISEATGSETKKSGKP--GPFLLSGSRDKTI 255
Query: 403 KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAH 462
K+ V + L GH + + + H I+S A D ++VW+ ++ C++T AH
Sbjct: 256 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNKRCMKTLNAH 314
Query: 463 DGHVRDTS---TRPAVETTDLTRSFG-WE 487
+ V T P V T + ++ WE
Sbjct: 315 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 63 (27.2 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISG-AYDGEVKVWNLTSQSCVQTYQAHDGHVRDTST 471
V GH++ + + P + T+I+ + D V+VW + ++ C + H+ V S
Sbjct: 162 VKTFTGHREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 219
Query: 472 RPAVETTDLTRSFGWES 488
P + ++ + G E+
Sbjct: 220 APESSYSSISEATGSET 236
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/108 (16%), Positives = 44/108 (40%)
Query: 228 GSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ--CQ 285
G LS D TIK W ++S ++ L H K +C D +
Sbjct: 243 GPFLLSGSRDKTIKMW--DVSTGMCLMTL-VGHDNWVRGVLFHSG-GKFILSCADDKTLR 298
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+W+++ ++ + + + + F+ +++ D+++ +++ R
Sbjct: 299 VWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV-DQTVKVWECR 345
>UNIPROTKB|I3LGC6 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
GeneTree:ENSGT00650000093229 OMA:AIKRSYI EMBL:FP565775
EMBL:FP578984 Ensembl:ENSSSCT00000024705 Uniprot:I3LGC6
Length = 2440
Score = 174 (66.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K DQ + N +QG D C +C RE+ F
Sbjct: 1590 EQQDAYEFFTSLIDQMDEYLK--KMGRDQ--IFKNTFQGIYSDQKICKDCPHRYEREEAF 1645
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1646 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPS 1699
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1700 VLVIHLMRFGFDWESGRSIKYDEQI 1724
>UNIPROTKB|B7WPF4 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
PROSITE:PS50235 GO:GO:0008234 InterPro:IPR015940 PROSITE:PS50030
GO:GO:0006511 GO:GO:0004221 EMBL:AC091609 HGNC:HGNC:12623
HOGENOM:HOG000068011 HOVERGEN:HBG105784 ChiTaRS:USP24
IPI:IPI00914628 ProteinModelPortal:B7WPF4 STRING:B7WPF4
PRIDE:B7WPF4 Ensembl:ENST00000407756 UCSC:uc001cyg.4
ArrayExpress:B7WPF4 Bgee:B7WPF4 Uniprot:B7WPF4
Length = 2460
Score = 174 (66.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K DQ + N +QG D C +C RE+ F
Sbjct: 1610 EQQDAYEFFTSLIDQMDEYLK--KMGRDQ--IFKNTFQGIYSDQKICKDCPHRYEREEAF 1665
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1666 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPS 1719
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1720 VLVIHLMRFGFDWESGRSIKYDEQI 1744
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 255
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 256 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 310
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 311 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 364
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 365 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 421
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 422 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 463
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 363 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 419
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 420 --DNKRIVSGAYDGKIKVW 436
Score = 110 (43.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 210 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 264
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 265 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 317
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 358
Score = 104 (41.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 363 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 415
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 255
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 256 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 310
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 311 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 364
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 365 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 421
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 422 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 463
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 363 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 419
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 420 --DNKRIVSGAYDGKIKVW 436
Score = 110 (43.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 210 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 264
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 265 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 317
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 358
Score = 104 (41.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 363 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 415
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 155 (59.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 46/160 (28%), Positives = 75/160 (46%)
Query: 94 KGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPSLHPF-EGPREYVRAL 152
K S+ + D I Q +N +E E KT +H I D + P++ L
Sbjct: 206 KPSEDEQKELDEITAKRQKRGKNEEESPAEEKTVLH-IKDAYDYQGRSYLHIPQDVGINL 264
Query: 153 NATKL-ERVFA-KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS-CV 209
+ + ++ + K + GH G+S + P ++S + D ++K+W + ++ CV
Sbjct: 265 RSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCV 324
Query: 210 QTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSE 249
+T+ H VRDVCF G+QFLS D IK W SE +
Sbjct: 325 RTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQ 364
Score = 58 (25.5 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 429 HPTKLSTIISGAYDGEVKVWN 449
HP + S +I+ +DG++K+W+
Sbjct: 558 HPHETSKVITCGWDGQIKLWD 578
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 629 HRIKLNDKV 637
HRIK +DKV
Sbjct: 543 HRIKAHDKV 551
>UNIPROTKB|Q9UPU5 [details] [associations]
symbol:USP24 "Ubiquitin carboxyl-terminal hydrolase 24"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] InterPro:IPR001394
InterPro:IPR009060 InterPro:IPR016024 InterPro:IPR018200
Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
SUPFAM:SSF48371 GO:GO:0008234 InterPro:IPR015940 PROSITE:PS50030
GO:GO:0006511 SUPFAM:SSF46934 GO:GO:0004221 eggNOG:COG5077
KO:K11840 EMBL:AC091609 EMBL:AK000321 EMBL:AK127075 EMBL:AB028980
EMBL:BC029660 IPI:IPI00902614 RefSeq:NP_056121.2 UniGene:Hs.477009
ProteinModelPortal:Q9UPU5 SMR:Q9UPU5 IntAct:Q9UPU5 STRING:Q9UPU5
MEROPS:C19.047 PhosphoSite:Q9UPU5 DMDM:212276491 PaxDb:Q9UPU5
PRIDE:Q9UPU5 Ensembl:ENST00000294383 GeneID:23358 KEGG:hsa:23358
UCSC:uc021onw.1 CTD:23358 GeneCards:GC01M055536 H-InvDB:HIX0000626
HGNC:HGNC:12623 HPA:HPA026723 HPA:HPA028428 MIM:610569
neXtProt:NX_Q9UPU5 PharmGKB:PA37248 HOGENOM:HOG000068011
HOVERGEN:HBG105784 InParanoid:Q9UPU5 OMA:AIKRSYI OrthoDB:EOG4T782B
ChiTaRS:USP24 GenomeRNAi:23358 NextBio:45380 ArrayExpress:Q9UPU5
Bgee:Q9UPU5 CleanEx:HS_USP24 Genevestigator:Q9UPU5
GermOnline:ENSG00000162402 Uniprot:Q9UPU5
Length = 2620
Score = 174 (66.3 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 493 QQHDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTF 552
+Q D E L D ++ K K DQ + N +QG D C +C RE+ F
Sbjct: 1770 EQQDAYEFFTSLIDQMDEYLK--KMGRDQ--IFKNTFQGIYSDQKICKDCPHRYEREEAF 1825
Query: 553 LDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPY 612
+ + L V +S +I ++ FVR E L+G+N Y+C+KC +K K P
Sbjct: 1826 MALNLGV----TSCQSLEI--SLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPS 1879
Query: 613 LLTLHLMRFDFDYSTMHRIKLNDKV 637
+L +HLMRF FD+ + IK ++++
Sbjct: 1880 VLVIHLMRFGFDWESGRSIKYDEQI 1904
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 159 (61.0 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 42/166 (25%), Positives = 79/166 (47%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L GH + ++ P + + ++S + DG +++W+L + +C+ Y+ H+ V D F P G
Sbjct: 495 LHGHSGPVYGVSFSPDR-NYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFG 553
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXX--HQRKSKIFATCGDQC-Q 285
F+S G D + W++ DH PL H + + D+ +
Sbjct: 554 YYFVSGGHDRVARLWAT-----DHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVR 608
Query: 286 LWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
LW+ +R F+ + +H + F+P K LAS ++D ++L+D
Sbjct: 609 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGK-FLASGSTDGRVLLWD 653
Score = 57 (25.1 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 413 VANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN-LTSQSCVQT--YQAHDGHV 466
+A L GH I L K I SG+ D V++W+ + + V+T + A GH+
Sbjct: 660 IAELKGHTGTIYAL-KFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDFTAATGHI 715
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 164 (62.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 82/339 (24%), Positives = 137/339 (40%)
Query: 164 PFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVC 223
P + L+GH D I + P + SG+ D +K+W+ S QT + H V+ V
Sbjct: 32 PELQTLEGHSDWIETVTFSPDG-RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 224 FLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQ 283
F P+G S D TIK W+S H + H+ +S F+ G
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRV-----------ESVAFSPNG-- 137
Query: 284 CQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTRAT----VLSR 339
QLW + D + V F+P D +LAS +++++I L+D+ L
Sbjct: 138 -QLWNPAIGSLKHTIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWDSATCGLKHTLGG 195
Query: 340 NPDEYLRETKTSIHRI--PRNIDPSLH---PFEGPREYVRALNATKLERVFAKPFVGPRE 394
+ + L + R+ + D ++ P G ++ ++ K+E + P G
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPN-GQLL 254
Query: 395 YVRALNAT-KLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ 453
+ +AT KL F L GH D + + P + SG+ D +K+W+ +
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS-QLLESGSGDNTIKLWD-PAT 312
Query: 454 SCVQTYQAHDGHVRDTSTRPAVETTDLTRSFGWESSDAW 492
++ G VR S ++E L + G S AW
Sbjct: 313 GILKHSMRTPGIVR--SIEFSIELPQLITNLGTFSIQAW 349
Score = 128 (50.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 53/231 (22%), Positives = 91/231 (39%)
Query: 136 DPSLHPFEGPREYVRALNATKLERVFAKPFVANL----DGHKDGISCLAKHPTKLSTIIS 191
D H EG + V ++ + +++ P + +L +GH D + +A P + S
Sbjct: 115 DSLKHTMEGHSDRVESVAFSPNGQLW-NPAIGSLKHTIEGHSDWVLSVAFSPDG-QLLAS 172
Query: 192 GAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNTIKTWSSELSESD 251
G+ + +K+W+ + T H V + F PDG S D TIK W
Sbjct: 173 GSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK 232
Query: 252 HIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFN 311
H + H+ Q + + +LW+ + D + V F+
Sbjct: 233 HTLEGHSNKIESLAFSPNGQLLAS--GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFS 290
Query: 312 PIDKHILASCASDRSIILYDTRATVLS---RNPDEYLRETKTSIHRIPRNI 359
P D +L S + D +I L+D +L R P +R + SI +P+ I
Sbjct: 291 P-DSQLLESGSGDNTIKLWDPATGILKHSMRTPG-IVRSIEFSIE-LPQLI 338
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 217 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 274
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 275 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 329
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 330 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 383
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 384 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 440
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 441 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 482
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 382 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 438
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 439 --DNKRIVSGAYDGKIKVW 455
Score = 110 (43.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 229 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 283
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 284 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 336
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 337 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 377
Score = 104 (41.7 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 382 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 434
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 218 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 275
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 276 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 330
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 331 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 384
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 385 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 441
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 442 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 483
Score = 129 (50.5 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 383 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 439
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 440 --DNKRIVSGAYDGKIKVW 456
Score = 110 (43.8 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 230 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 284
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 285 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 337
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 338 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 378
Score = 104 (41.7 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 383 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 435
>POMBASE|SPBC1703.12 [details] [associations]
symbol:ubp9 "ubiquitin C-terminal hydrolase Ubp9"
species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030428
"cell septum" evidence=IEA] [GO:0032153 "cell division site"
evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
PROSITE:PS00973 PROSITE:PS50235 PomBase:SPBC1703.12 GO:GO:0005829
GO:GO:0005634 GO:GO:0034613 GO:GO:0032153 GO:GO:0051286
EMBL:CU329671 GO:GO:0006897 GenomeReviews:CU329671_GR GO:GO:0006511
GO:GO:0030428 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11872
OrthoDB:EOG43XZCS eggNOG:COG5077 PIR:T50325 RefSeq:NP_596207.1
ProteinModelPortal:Q9P7V9 STRING:Q9P7V9 MEROPS:C19.A62
EnsemblFungi:SPBC1703.12.1 GeneID:2540120 KEGG:spo:SPBC1703.12
OMA:ASAFHEL NextBio:20801256 Uniprot:Q9P7V9
Length = 585
Score = 167 (63.8 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 487 ESSDAWQQHDIQELCRVLFDAL-ET--QFKGSKTTGDQADLINNLYQGKMRDYVKCLECG 543
E+ + QQ D E L +++ ET ++ G+ + +++L++G + KCL C
Sbjct: 189 EAFRSTQQQDAHEFFNFLLNSVTETLDEYYGNHSDVMHPKWVHSLFEGTLTSETKCLTCE 248
Query: 544 TEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHK 603
SR+++FLD+ + + S + +R+F E L N++ CD C +A K
Sbjct: 249 NITSRDESFLDLSIDIENHTS------VTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEK 302
Query: 604 GLKFTEFPYLLTLHLMRFDFD 624
+K + P +L+LHL RF ++
Sbjct: 303 RMKIKKLPKILSLHLKRFKYN 323
Score = 45 (20.9 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 2 TCYLNSLIQALFMTPEFRNAV 22
TCY++S++ +L+ FR+++
Sbjct: 49 TCYVSSVLVSLYHLKPFRDSL 69
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 287
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 288 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 342
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 343 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 396
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 397 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 453
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 454 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 495
Score = 129 (50.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 395 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 451
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 452 --DNKRIVSGAYDGKIKVW 468
Score = 110 (43.8 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 242 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 296
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 349
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 390
Score = 104 (41.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 395 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 447
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 133 (51.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 67/284 (23%), Positives = 115/284 (40%)
Query: 209 VQTYQAHDGHVRDV-CFLPDGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXX 267
+Q Q + + V C D + +S DN+IK W E ++ HT
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ-- 287
Query: 268 XXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ + + + ++W+ E + + +++ H++F+ ++ +C+ DRSI
Sbjct: 288 --YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS---NGLMVTCSKDRSI 342
Query: 328 ILYDTRATVLSRNPDEYLRETKTSIHRIPRNI----DPSLHPFEGPR----------EYV 373
++D + D LR HR N+ D + G R E+V
Sbjct: 343 AVWDMASAT-----DITLRRVLVG-HRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV 396
Query: 374 RALNATKLERVFAKPFVGPREYVRAL--NATKLERVFAKPFVANLDGHKDGISCLAKHPT 431
R LN K R A R V N +L + + L+GH++ + C+ +
Sbjct: 397 RTLNGHK--RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDN 453
Query: 432 KLSTIISGAYDGEVKVWNL---------TSQSCVQTYQAHDGHV 466
K I+SGAYDG++KVW+L S C++T H G V
Sbjct: 454 K--RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRV 495
Score = 129 (50.5 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR + F
Sbjct: 395 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 451
Query: 225 LPDGSQFLSVGIDNTIKTW 243
D + +S D IK W
Sbjct: 452 --DNKRIVSGAYDGKIKVW 468
Score = 110 (43.8 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 43/164 (26%), Positives = 72/164 (43%)
Query: 175 GISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSV 234
G+ CL K IISG D +K+W+ TS C++ H G V +C D ++
Sbjct: 242 GVYCLQYDDEK---IISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTG 296
Query: 235 GIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSK-IFATCG-DQC-QLWEHER 291
D+T++ W E + + H H R S + TC D+ +W+
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVL-------HLRFSNGLMVTCSKDRSIAVWDMAS 349
Query: 292 NEPI---RAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDT 332
I R + +++ V F+ DK+I+ S + DR+I ++ T
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDFD--DKYIV-SASGDRTIKVWST 390
Score = 104 (41.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 412 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVR 467
FV L+GHK GI+CL ++ +L ++SG+ D +++W++ +C++ + H+ VR
Sbjct: 395 FVRTLNGHKRGIACL-QYRDRL--VVSGSSDNTIRLWDIECGACLRVLEGHEELVR 447
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 118 (46.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|I3LI16 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
Uniprot:I3LI16
Length = 606
Score = 132 (51.5 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
I +L+ G+++ + C +CG + D F D+ LP+ G +++ MR F + + L
Sbjct: 412 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVL 469
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
DG + C +C + K FP +L LHL RF
Sbjct: 470 DGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 506
Score = 82 (33.9 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 27/98 (27%), Positives = 42/98 (42%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNL-QT----STRPAV 56
TC++NS++Q L T E R+ + Y D++ +S L + F L QT S V
Sbjct: 276 TCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIWTSSPNDVV 335
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDALETQ 92
++ + + Q D QE R L D L +
Sbjct: 336 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 373
Score = 41 (19.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 492 WQQHDIQELCRVLFDALETQ 511
+ Q D QE R L D L +
Sbjct: 354 YNQQDAQEFLRFLLDGLHNE 373
Score = 38 (18.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 79 QELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNPDEYLRETKTSIHRIPRNIDPS 138
+ELC AL+ ++ + + AD + N Y P T+ + R+P + P+
Sbjct: 178 KELC-----ALQGLYQAASRSEYLADYLEN-YGRKGSTPQV---PTQAPLSRVPEVLSPT 228
Query: 139 LHP 141
P
Sbjct: 229 YRP 231
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/184 (22%), Positives = 81/184 (44%)
Query: 149 VRALNATKLERVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQ-S 207
+R N LERV + H D I C+A HPT+ I++ + D +K+W+ + S
Sbjct: 81 IRVFNYNTLERVHM------FEAHSDYIRCIAVHPTQ-PFILTSSDDMLIKLWDWDKKWS 133
Query: 208 CVQTYQAHDGHVRDVCFLP-DGSQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXX 266
C Q ++ H +V + P D +QF S +D TIK W S + + H
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 267 XXXHQRKSKIFATCGDQCQLWEHERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRS 326
+ I ++W+++ ++ + ++ V F+P + I+ + + D +
Sbjct: 194 YSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHP-ELPIIITGSEDGT 252
Query: 327 IILY 330
+ ++
Sbjct: 253 VRIW 256
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 169 LDGHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPD 227
L+GH+ G++C+ + +ISGA D VK+W+ +++CVQT + H +V V F P+
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE 240
Query: 228 GSQFLSVGIDNTIKTWSS 245
++ D T++ W S
Sbjct: 241 LPIIITGSEDGTVRIWHS 258
Score = 117 (46.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 169 LDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDG 228
L D + + HPT+ +++ Y+G V VWN +Q+ V+T++ D VR F+
Sbjct: 11 LTARSDRVKSVDLHPTE-PWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARK 69
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQC-QLW 287
+ ++ D I+ ++ E H+ H+ H + I + D +LW
Sbjct: 70 NWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAV---HPTQPFILTSSDDMLIKLW 126
Query: 288 EHERNEPI-RAFSWNVDSLHHVQFNPIDKHILASCASDRSI 327
+ ++ + F + + + NP D + AS + DR+I
Sbjct: 127 DWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTI 167
Score = 102 (41.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 416 LDGHKDGISCLAKHPT-KLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRP 473
L+GH+ G++C+ + +ISGA D VK+W+ +++CVQT + H +V S P
Sbjct: 181 LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHP 239
Score = 94 (38.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 410 KPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWN 449
K V L+GH +SC++ HP +L II+G+ DG V++W+
Sbjct: 219 KTCVQTLEGHAQNVSCVSFHP-ELPIIITGSEDGTVRIWH 257
Score = 91 (37.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 33/156 (21%), Positives = 69/156 (44%)
Query: 180 AKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGIDNT 239
AK + + +++GA D +++V+N + V ++AH ++R + P L+ D
Sbjct: 63 AKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDML 122
Query: 240 IKTWSSELSES-DHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-DQC-QLWEHERNEPIR 296
IK W + S + HT + + + FA+ D+ ++W+ + P
Sbjct: 123 IKLWDWDKKWSCSQVFEGHTHYVMQIVI---NPKDNNQFASASLDRTIKVWQLGSSSPNF 179
Query: 297 AFSWNVDSLHHVQF-NPIDKHILASCASDRSIILYD 331
+ ++ + + + DK L S A DR + ++D
Sbjct: 180 TLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
>UNIPROTKB|E2RSX3 [details] [associations]
symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
species:9615 "Canis lupus familiaris" [GO:0050821 "protein
stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
NextBio:20893859 Uniprot:E2RSX3
Length = 606
Score = 131 (51.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIEAMRAFVRPETL 584
I +L+ G+++ + C +CG + D F D+ LP+ G + + MR F + + L
Sbjct: 412 IGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVL 469
Query: 585 DGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRF 621
DG + C +C + K FP +L LHL RF
Sbjct: 470 DGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRF 506
Score = 83 (34.3 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 26/98 (26%), Positives = 43/98 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETSITYQLQKLFVNL-QT----STRPAV 56
TC++NS++Q L T E R+ + Y D++ +++ L + F L QT S V
Sbjct: 276 TCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIWTSSPNDVV 335
Query: 57 ETTDLTRSFGWESSD--AWQQHDIQELCRVLFDALETQ 92
++ + + Q D QE R L D L +
Sbjct: 336 SPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE 373
Score = 41 (19.5 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 492 WQQHDIQELCRVLFDALETQ 511
+ Q D QE R L D L +
Sbjct: 354 YNQQDAQEFLRFLLDGLHNE 373
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 143 (55.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 41/165 (24%), Positives = 74/165 (44%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVW--NLTSQSCVQTYQAHDGHVRDVCFLPDG 228
GHKD ++C+ P+ + SG+ D V++W N+ +S V ++AH VR V F DG
Sbjct: 59 GHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTV--FRAHTATVRSVHFCSDG 115
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWE 288
++ D T+K WS+ + L + + A+ +LW+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQR--FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 289 HERNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
E I ++ + + +V F+P I A+ D ++ ++D R
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCI-AAAGMDNTVKVWDAR 217
Score = 141 (54.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 34/161 (21%), Positives = 69/161 (42%)
Query: 171 GHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQ 230
GH+D ++C+ + SG+ D + +W++ QS + H V V F P G
Sbjct: 17 GHRDAVTCV-DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHL 75
Query: 231 FLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCGDQCQLWEHE 290
S D T++ W + + HT Q S + A+ ++W
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ--SLVTASDDKTVKVWSTH 133
Query: 291 RNEPIRAFSWNVDSLHHVQFNPIDKHILASCASDRSIILYD 331
R + + + +++ + +F+P D ++ S + D+++ L+D
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD 173
Score = 141 (54.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 165 FVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCF 224
F+ +L H + + C AK I+S + D VK+W+ TS+ C+ +Y H G V V F
Sbjct: 137 FLFSLTQHINWVRC-AKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDF 195
Query: 225 LPDGSQFLSVGIDNTIKTWSS 245
P G+ + G+DNT+K W +
Sbjct: 196 HPSGTCIAAAGMDNTVKVWDA 216
Score = 67 (28.6 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 429 HPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDTSTRPA 474
HP+ + I + D VKVW+ + +Q YQ H V S P+
Sbjct: 196 HPSG-TCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPS 240
Score = 52 (23.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 419 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDG 464
H ++ L+ HP+ + +I+ + D +K+ +L + T H G
Sbjct: 228 HSAAVNALSFHPSG-NYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 117 (46.2 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK---DPYIASMEHHTDWV 77
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 78 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 136
Query: 237 DNTIKTW 243
D I W
Sbjct: 137 DRQIFLW 143
Score = 96 (38.9 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 197 RTCAK--LMKLKGHTDNVKSLLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 251
Score = 87 (35.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 31/175 (17%), Positives = 75/175 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS--CVQTYQAHDGHVRDVCFLPDGS 229
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGK 87
Query: 230 QFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQLW 287
+S D T+K W++ + H + + ++ A+ G D Q LW
Sbjct: 88 TLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFLW 143
Query: 288 EHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
+ N + + S N DS++ + N + ++ S ++++ + ++D R
Sbjct: 144 DVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGT-VIVSGSTEKVLRVWDPR 197
>UNIPROTKB|E7EWV7 [details] [associations]
symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase 35"
species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001394
InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
GO:GO:0006511 GO:GO:0004221 EMBL:AP002985 HGNC:HGNC:20061
ChiTaRS:USP35 IPI:IPI00829926 ProteinModelPortal:E7EWV7
Ensembl:ENST00000441408 UCSC:uc001ozd.3 ArrayExpress:E7EWV7
Bgee:E7EWV7 Uniprot:E7EWV7
Length = 604
Score = 135 (52.6 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 555 IPLPVRPFGSSVAYGDIIEAMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLL 614
IP R GS + +++ + F+ PE L N+Y+C+ C DA K ++ ++ P L
Sbjct: 332 IPSGERTCGSEGSRS-VLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYL 390
Query: 615 TLHLMRFDFDYSTMHRIKLNDKV 637
L L+RF FD TM R K+ D V
Sbjct: 391 ILTLLRFSFDLRTMRRRKILDDV 413
Score = 61 (26.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 18 FRNAVYKWKYENDIAEETSITYQLQKLFVNLQTSTRPAVETTD-LTRSFG-WESSDAWQQ 75
FR+ V + EN+ + +T +LQ LF L+ S RPA+ + L+ S+ W S Q
Sbjct: 51 FRHCVLRLT-ENN--SQPLMT-KLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGT--Q 104
Query: 76 HDIQELCRVLFDALETQFKGSKTTGDQADLINNLYQVLSRNP-DEYLRETKTSIHRI 131
D E + L D L + K TG + + L Q S +P +E + TS+ ++
Sbjct: 105 QDCSEYLKYLLDRLHEEEK----TGTR--ICQKLKQSSSPSPPEEPPAPSSTSVEKM 155
Score = 59 (25.8 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 525 INNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRP 561
+ ++ GK+ + CL C SRE+ F D+ L P
Sbjct: 152 VEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPP 188
Score = 39 (18.8 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 470 STRPAVETTD-LTRSFG-WESSDAWQQHDIQELCRVLFDALETQFK 513
S RPA+ + L+ S+ W S Q D E + L D L + K
Sbjct: 80 SQRPAISPENFLSASWTPWFSPGT--QQDCSEYLKYLLDRLHEEEK 123
>UNIPROTKB|A1CW53 [details] [associations]
symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
creB" species:331117 "Neosartorya fischeri NRRL 181" [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0045013 "carbon catabolite repression of transcription"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:DS027685
RefSeq:XP_001266752.1 EnsemblFungi:CADNFIAT00009466 GeneID:4593253
KEGG:nfi:NFIA_103430 Uniprot:A1CW53
Length = 761
Score = 149 (57.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 514 GSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIE 573
GSKT + ++ L++G + +CL C R++ FLD+ + + S +
Sbjct: 264 GSKTP-NTTRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSS------VTS 316
Query: 574 AMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKL 633
+R F E L N++ CD CG +A K +K P +L LHL RF + KL
Sbjct: 317 CLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKL 376
Query: 634 NDKV 637
+V
Sbjct: 377 FHRV 380
Score = 66 (28.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAE-ETSITYQLQKLFVNLQTSTRPAVE 57
TCY NS++Q L+ + FR AV + I E ++ L+ N Q E
Sbjct: 63 TCYCNSILQCLYYSVPFREAVINYPTRTPIESLEAALAKSLRYPNPNAQLEAEAQAE 119
>UNIPROTKB|Q0CT11 [details] [associations]
symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
creB" species:341663 "Aspergillus terreus NIH2624" [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0045013 "carbon catabolite repression of transcription"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
EMBL:CH476597 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533
HOGENOM:HOG000192482 OrthoDB:EOG43XZCS GO:GO:0045013
RefSeq:XP_001212351.1 EnsemblFungi:CADATEAT00006518 GeneID:4317779
Uniprot:Q0CT11
Length = 768
Score = 150 (57.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 514 GSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIE 573
GSKT + ++ L++G + +CL C R++ FLD+ + + S +
Sbjct: 264 GSKTP-NTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSS------VTS 316
Query: 574 AMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKL 633
+R F E L N++ CD CG +A K +K P +L LHL RF + KL
Sbjct: 317 CLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKL 376
Query: 634 NDKV 637
+V
Sbjct: 377 FHRV 380
Score = 65 (27.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAEETS 36
TCY NS++Q L+ + FR AV + I T+
Sbjct: 63 TCYCNSILQCLYYSVPFREAVINYPTRTPIESLTA 97
>UNIPROTKB|B0Y4P5 [details] [associations]
symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
creB" species:451804 "Aspergillus fumigatus A1163" [GO:0004221
"ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0045013 "carbon catabolite repression of transcription"
evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
GO:GO:0006511 GO:GO:0004221 HOGENOM:HOG000192482 GO:GO:0045013
EMBL:DS499598 EnsemblFungi:CADAFUBT00006929 Uniprot:B0Y4P5
Length = 767
Score = 149 (57.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/124 (29%), Positives = 57/124 (45%)
Query: 514 GSKTTGDQADLINNLYQGKMRDYVKCLECGTEKSREDTFLDIPLPVRPFGSSVAYGDIIE 573
GSKT + ++ L++G + +CL C R++ FLD+ + + S +
Sbjct: 258 GSKTP-NTTRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSS------VTS 310
Query: 574 AMRAFVRPETLDGANQYFCDKCGKKCDAHKGLKFTEFPYLLTLHLMRFDFDYSTMHRIKL 633
+R F E L N++ CD CG +A K +K P +L LHL RF + KL
Sbjct: 311 CLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKL 370
Query: 634 NDKV 637
+V
Sbjct: 371 FHRV 374
Score = 66 (28.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 2 TCYLNSLIQALFMTPEFRNAVYKWKYENDIAE-ETSITYQLQKLFVNLQTSTRPAVE 57
TCY NS++Q L+ + FR AV + I E ++ L+ N Q E
Sbjct: 57 TCYCNSILQCLYYSVPFREAVINYPTRTPIESLEAALAKSLRYPNPNAQLEAEAQAE 113
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 118 DEYLRETKTSIHRIPRNIDPSLHP-FEGPREYVRALNATKLERVFAKPFVANLDGHKDGI 176
DE + + ++ + +DP+L+ F R+ + + + + P++A+++ H D +
Sbjct: 23 DEVEKYNRNGVNAL--QLDPALNRLFTAGRDSIIRIWSVNQHK--QDPYIASMEHHTDWV 78
Query: 177 SCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHDGHVRDVCFLPDGSQFLSVGI 236
+ + T+IS + D VKVWN C+ T + H +V+ + + D S G+
Sbjct: 79 NDIVLCCNG-KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGL 137
Query: 237 DNTIKTW 243
D I W
Sbjct: 138 DRQIFLW 144
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 406 RVFAKPFVANLDGHKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQSCVQTYQAHD 463
R AK + L GH D + L + + +SG+ DG +++W+L Q C+ TY+ HD
Sbjct: 198 RTCAK--LMKLKGHTDNVKALLLNRDG-TQCLSGSSDGTIRLWSLGQQRCIATYRVHD 252
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 32/176 (18%), Positives = 75/176 (42%)
Query: 172 HKDGISCLAKHPTKLSTIISGAYDGEVKVWNLTSQS---CVQTYQAHDGHVRDVCFLPDG 228
+++G++ L P L+ + + D +++W++ + + + H V D+ +G
Sbjct: 29 NRNGVNALQLDPA-LNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNG 87
Query: 229 SQFLSVGIDNTIKTWSSELSESDHIVPLHTXXXXXXXXXXXHQRKSKIFATCG-D-QCQL 286
+S D T+K W++ + H + + ++ A+ G D Q L
Sbjct: 88 KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALA----YAKDKELVASAGLDRQIFL 143
Query: 287 WEHER-------NEPIR--AFSWNVDSLHHVQFNPIDKHILASCASDRSIILYDTR 333
W+ N + + S N DS++ + N + I+ S ++++ + ++D R
Sbjct: 144 WDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGT-IIVSGSTEKVLRVWDPR 198
WARNING: HSPs involving 743 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 639 628 0.00091 120 3 11 22 0.38 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 993
No. of states in DFA: 619 (66 KB)
Total size of DFA: 384 KB (2183 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.32u 0.09s 55.41t Elapsed: 00:00:44
Total cpu time: 55.40u 0.10s 55.50t Elapsed: 00:00:44
Start: Thu Aug 15 12:00:17 2013 End: Thu Aug 15 12:01:01 2013
WARNINGS ISSUED: 2