Query psy18074
Match_columns 197
No_of_seqs 247 out of 2252
Neff 11.3
Searched_HMMs 29240
Date Fri Aug 16 21:59:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18074.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18074hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 9.7E-28 3.3E-32 175.9 19.2 145 1-155 174-319 (321)
2 3ow8_A WD repeat-containing pr 100.0 2.4E-27 8.2E-32 173.8 15.8 151 1-161 132-283 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 1.6E-26 5.6E-31 170.5 19.7 144 2-154 195-340 (340)
4 3iz6_a 40S ribosomal protein R 100.0 1.1E-26 3.7E-31 173.9 18.4 153 2-158 217-376 (380)
5 2ynn_A Coatomer subunit beta'; 99.9 1.2E-26 4.1E-31 168.7 17.3 148 1-158 23-173 (304)
6 1vyh_C Platelet-activating fac 99.9 2E-26 6.8E-31 174.1 18.5 148 2-159 119-267 (410)
7 2ynn_A Coatomer subunit beta'; 99.9 7.2E-26 2.5E-30 164.7 19.8 151 2-160 108-262 (304)
8 2pbi_B Guanine nucleotide-bind 99.9 5.8E-26 2E-30 168.5 19.5 144 2-154 209-354 (354)
9 4gqb_B Methylosome protein 50; 99.9 4.3E-26 1.5E-30 168.6 18.5 150 1-159 137-291 (344)
10 1got_B GT-beta; complex (GTP-b 99.9 1.6E-26 5.3E-31 170.6 15.6 149 4-160 155-304 (340)
11 1vyh_C Platelet-activating fac 99.9 8E-26 2.7E-30 170.8 18.3 144 2-155 245-409 (410)
12 4ery_A WD repeat-containing pr 99.9 2.3E-25 7.7E-30 162.3 20.0 149 1-159 33-182 (312)
13 2pbi_B Guanine nucleotide-bind 99.9 6.9E-26 2.4E-30 168.1 16.6 151 2-160 165-318 (354)
14 4gqb_B Methylosome protein 50; 99.9 5.6E-26 1.9E-30 168.0 15.5 169 4-180 94-269 (344)
15 1nr0_A Actin interacting prote 99.9 4.7E-25 1.6E-29 174.3 19.7 154 4-158 161-356 (611)
16 4ery_A WD repeat-containing pr 99.9 1.2E-24 4E-29 158.5 19.8 150 1-159 75-225 (312)
17 3fm0_A Protein CIAO1; WDR39,SG 99.9 7E-25 2.4E-29 162.1 18.7 148 1-156 71-224 (345)
18 3frx_A Guanine nucleotide-bind 99.9 1.1E-24 3.8E-29 159.4 19.2 148 1-159 75-229 (319)
19 3fm0_A Protein CIAO1; WDR39,SG 99.9 8.7E-25 3E-29 161.6 18.6 150 1-158 26-182 (345)
20 1erj_A Transcriptional repress 99.9 1.6E-24 5.4E-29 162.9 19.6 154 2-159 134-289 (393)
21 3vl1_A 26S proteasome regulato 99.9 1.9E-24 6.6E-29 163.0 19.7 156 2-159 108-280 (420)
22 2hes_X YDR267CP; beta-propelle 99.9 2E-24 6.8E-29 158.8 18.9 149 1-158 68-231 (330)
23 3frx_A Guanine nucleotide-bind 99.9 3.5E-24 1.2E-28 156.8 19.7 145 2-158 118-268 (319)
24 2aq5_A Coronin-1A; WD40 repeat 99.9 3E-24 1E-28 161.5 18.6 151 2-159 93-256 (402)
25 3iz6_a 40S ribosomal protein R 99.9 4E-24 1.4E-28 160.0 19.0 154 3-159 170-331 (380)
26 2xzm_R RACK1; ribosome, transl 99.9 5.3E-24 1.8E-28 157.2 19.4 145 2-156 87-243 (343)
27 2ymu_A WD-40 repeat protein; u 99.9 2.7E-24 9.2E-29 168.3 18.4 141 1-154 436-577 (577)
28 2hes_X YDR267CP; beta-propelle 99.9 7.1E-24 2.4E-28 155.8 19.4 145 4-157 25-184 (330)
29 2pm7_B Protein transport prote 99.9 8.7E-24 3E-28 153.2 19.4 148 2-157 66-238 (297)
30 4g56_B MGC81050 protein; prote 99.9 4.1E-24 1.4E-28 158.8 17.6 150 1-159 149-303 (357)
31 2xzm_R RACK1; ribosome, transl 99.9 8.7E-24 3E-28 156.1 18.9 147 2-155 38-201 (343)
32 4g56_B MGC81050 protein; prote 99.9 5.2E-24 1.8E-28 158.2 17.5 147 4-161 195-347 (357)
33 3lrv_A PRE-mRNA-splicing facto 99.9 5.5E-24 1.9E-28 157.1 17.5 151 2-159 138-294 (343)
34 2pm7_B Protein transport prote 99.9 1.8E-23 6.3E-28 151.5 19.5 151 1-159 19-191 (297)
35 3lrv_A PRE-mRNA-splicing facto 99.9 1.2E-23 4.2E-28 155.2 17.9 147 6-160 88-247 (343)
36 2j04_B YDR362CP, TAU91; beta p 99.9 2.2E-24 7.5E-29 167.3 14.1 146 3-157 277-428 (524)
37 1nr0_A Actin interacting prote 99.9 6.3E-24 2.2E-28 167.8 17.0 146 1-155 458-609 (611)
38 1erj_A Transcriptional repress 99.9 1.7E-23 5.8E-28 157.2 18.4 147 2-157 218-389 (393)
39 4e54_B DNA damage-binding prot 99.9 7.5E-24 2.6E-28 161.1 16.6 156 2-159 220-432 (435)
40 3dm0_A Maltose-binding peripla 99.9 1.2E-23 4E-28 168.4 18.5 151 1-160 440-595 (694)
41 2w18_A PALB2, fancn, partner a 99.9 1E-23 3.5E-28 153.3 16.3 144 2-155 192-355 (356)
42 4aow_A Guanine nucleotide-bind 99.9 6.9E-23 2.4E-27 150.2 19.5 153 3-159 185-339 (340)
43 3dwl_C Actin-related protein 2 99.9 3.1E-24 1.1E-28 159.9 12.5 148 1-156 21-176 (377)
44 3dwl_C Actin-related protein 2 99.9 3.8E-24 1.3E-28 159.4 12.6 146 2-157 111-281 (377)
45 2j04_B YDR362CP, TAU91; beta p 99.9 3.9E-24 1.3E-28 165.9 13.1 171 3-180 225-409 (524)
46 4h5i_A Guanine nucleotide-exch 99.9 1.4E-23 4.6E-28 156.4 15.3 149 1-158 186-344 (365)
47 3f3f_A Nucleoporin SEH1; struc 99.9 4.9E-23 1.7E-27 150.8 17.7 158 2-159 70-339 (351)
48 1sq9_A Antiviral protein SKI8; 99.9 4.3E-23 1.5E-27 154.5 17.5 154 2-158 197-396 (397)
49 3gre_A Serine/threonine-protei 99.9 2E-23 6.7E-28 158.5 15.5 158 2-161 181-363 (437)
50 2aq5_A Coronin-1A; WD40 repeat 99.9 4.9E-23 1.7E-27 154.9 17.4 146 5-159 49-209 (402)
51 3zwl_B Eukaryotic translation 99.9 1.4E-22 4.9E-27 149.8 19.6 151 2-162 186-351 (369)
52 3mmy_A MRNA export factor; mRN 99.9 1.6E-23 5.5E-28 154.9 14.0 112 2-115 53-167 (368)
53 4e54_B DNA damage-binding prot 99.9 2.7E-23 9.3E-28 158.0 15.5 149 2-159 131-284 (435)
54 3bg1_A Protein SEC13 homolog; 99.9 3E-23 1E-27 151.6 15.0 148 2-157 24-198 (316)
55 1k8k_C P40, ARP2/3 complex 41 99.9 1.6E-22 5.4E-27 150.0 18.7 147 2-157 107-274 (372)
56 3vl1_A 26S proteasome regulato 99.9 2.2E-22 7.4E-27 151.8 18.9 150 2-159 150-324 (420)
57 3odt_A Protein DOA1; ubiquitin 99.9 1.3E-22 4.3E-27 147.1 16.5 145 2-160 154-299 (313)
58 3f3f_A Nucleoporin SEH1; struc 99.9 1.5E-22 5.2E-27 148.2 17.1 159 1-160 21-252 (351)
59 2ymu_A WD-40 repeat protein; u 99.9 1.4E-22 4.9E-27 158.5 17.9 143 1-156 395-538 (577)
60 4a11_B DNA excision repair pro 99.9 4.1E-22 1.4E-26 149.3 19.3 160 2-162 155-370 (408)
61 1gxr_A ESG1, transducin-like e 99.9 5E-22 1.7E-26 145.3 19.3 148 2-159 108-257 (337)
62 1r5m_A SIR4-interacting protei 99.9 1.9E-22 6.6E-27 151.7 17.1 146 2-156 258-424 (425)
63 3dm0_A Maltose-binding peripla 99.9 2E-22 6.7E-27 161.4 18.0 147 2-159 483-634 (694)
64 4gq1_A NUP37; propeller, trans 99.9 3.3E-23 1.1E-27 155.7 12.7 162 2-164 100-293 (393)
65 3bg1_A Protein SEC13 homolog; 99.9 3.7E-23 1.3E-27 151.1 12.6 148 2-157 70-247 (316)
66 3sfz_A APAF-1, apoptotic pepti 99.9 3.5E-22 1.2E-26 168.5 20.2 149 1-159 625-776 (1249)
67 3vu4_A KMHSV2; beta-propeller 99.9 5.4E-22 1.9E-26 147.2 18.5 151 9-159 155-338 (355)
68 3dw8_B Serine/threonine-protei 99.9 1.7E-22 5.6E-27 153.5 15.9 157 1-159 38-260 (447)
69 3k26_A Polycomb protein EED; W 99.9 1.6E-22 5.5E-27 149.5 15.2 155 3-160 85-263 (366)
70 3dw8_B Serine/threonine-protei 99.9 2.9E-22 9.9E-27 152.2 16.8 156 2-160 188-376 (447)
71 1pgu_A Actin interacting prote 99.9 3.4E-22 1.2E-26 157.1 17.6 145 3-157 456-614 (615)
72 2pm9_A Protein WEB1, protein t 99.9 1E-22 3.5E-27 153.2 14.0 153 4-157 228-414 (416)
73 2oaj_A Protein SNI1; WD40 repe 99.9 1.9E-22 6.5E-27 165.4 16.7 148 2-155 446-659 (902)
74 1gxr_A ESG1, transducin-like e 99.9 1.1E-21 3.7E-26 143.5 19.1 147 2-160 152-299 (337)
75 2pm9_A Protein WEB1, protein t 99.9 4.2E-22 1.4E-26 149.9 17.3 149 3-160 178-340 (416)
76 3mkq_A Coatomer beta'-subunit; 99.9 2.1E-22 7.1E-27 163.3 16.5 148 1-158 23-173 (814)
77 3ei3_B DNA damage-binding prot 99.9 6.6E-22 2.3E-26 147.7 18.0 146 2-158 84-237 (383)
78 3jrp_A Fusion protein of prote 99.9 5.9E-22 2E-26 147.1 17.2 150 1-159 21-193 (379)
79 1k8k_C P40, ARP2/3 complex 41 99.9 1.2E-21 4.1E-26 145.3 18.8 150 2-159 63-235 (372)
80 4aez_A CDC20, WD repeat-contai 99.9 8.3E-22 2.8E-26 148.3 18.1 147 2-158 185-337 (401)
81 3jrp_A Fusion protein of prote 99.9 1.1E-21 3.9E-26 145.6 18.6 148 2-158 68-241 (379)
82 3ei3_B DNA damage-binding prot 99.9 8.8E-22 3E-26 147.0 17.6 146 2-160 130-285 (383)
83 3v7d_B Cell division control p 99.9 8.3E-22 2.9E-26 150.6 17.5 146 2-160 279-424 (464)
84 3zwl_B Eukaryotic translation 99.9 1E-21 3.6E-26 145.1 17.4 154 1-157 42-206 (369)
85 3k26_A Polycomb protein EED; W 99.9 1E-21 3.4E-26 145.2 17.2 153 4-163 35-198 (366)
86 4aez_A CDC20, WD repeat-contai 99.9 2.3E-21 7.7E-26 145.9 19.4 147 2-159 145-295 (401)
87 3i2n_A WD repeat-containing pr 99.9 5.5E-22 1.9E-26 146.3 15.7 156 2-159 179-355 (357)
88 2vdu_B TRNA (guanine-N(7)-)-me 99.9 9.8E-22 3.3E-26 150.0 17.4 148 2-159 113-273 (450)
89 2j04_A TAU60, YPL007P, hypothe 99.9 6.8E-22 2.3E-26 152.2 16.4 144 1-160 95-257 (588)
90 4aow_A Guanine nucleotide-bind 99.9 2.1E-21 7E-26 142.4 18.3 147 2-158 139-287 (340)
91 2xyi_A Probable histone-bindin 99.9 2.1E-21 7.3E-26 147.4 18.8 148 2-158 243-411 (430)
92 4gq1_A NUP37; propeller, trans 99.9 4.5E-22 1.5E-26 149.5 14.1 154 2-156 155-388 (393)
93 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.7E-21 5.9E-26 148.7 17.4 154 1-155 159-337 (450)
94 4gga_A P55CDC, cell division c 99.9 1.8E-21 6E-26 147.4 17.3 148 2-159 241-397 (420)
95 1sq9_A Antiviral protein SKI8; 99.9 9.8E-22 3.4E-26 147.1 15.6 156 2-160 136-325 (397)
96 1r5m_A SIR4-interacting protei 99.9 2.9E-21 1E-25 145.2 18.1 145 4-159 218-363 (425)
97 3v7d_B Cell division control p 99.9 3.4E-21 1.2E-25 147.2 18.1 155 2-159 131-343 (464)
98 2xyi_A Probable histone-bindin 99.9 1E-20 3.5E-25 143.6 20.3 147 3-158 193-354 (430)
99 4h5i_A Guanine nucleotide-exch 99.9 4.9E-22 1.7E-26 148.0 11.7 173 2-181 144-325 (365)
100 2j04_A TAU60, YPL007P, hypothe 99.9 1.7E-21 5.7E-26 150.0 14.6 148 1-159 25-213 (588)
101 3i2n_A WD repeat-containing pr 99.9 3.6E-21 1.2E-25 141.9 15.9 153 2-159 128-293 (357)
102 2oaj_A Protein SNI1; WD40 repe 99.9 3.1E-21 1.1E-25 158.3 16.2 154 3-159 69-244 (902)
103 3mmy_A MRNA export factor; mRN 99.9 9.1E-21 3.1E-25 140.0 16.8 137 2-148 97-336 (368)
104 3vu4_A KMHSV2; beta-propeller 99.9 9.4E-21 3.2E-25 140.6 16.8 143 5-158 73-272 (355)
105 3gre_A Serine/threonine-protei 99.9 9.6E-21 3.3E-25 143.7 16.8 150 2-159 122-294 (437)
106 3jro_A Fusion protein of prote 99.9 1E-20 3.5E-25 152.8 17.6 148 2-158 66-239 (753)
107 3mkq_A Coatomer beta'-subunit; 99.9 8.8E-21 3E-25 153.8 16.9 151 1-159 107-261 (814)
108 3odt_A Protein DOA1; ubiquitin 99.9 1.5E-20 5.2E-25 136.2 16.2 145 2-160 113-258 (313)
109 3jro_A Fusion protein of prote 99.9 1E-20 3.4E-25 152.8 16.5 148 2-158 20-190 (753)
110 2oit_A Nucleoporin 214KDA; NH2 99.9 7E-21 2.4E-25 144.8 13.6 154 2-158 103-279 (434)
111 3sfz_A APAF-1, apoptotic pepti 99.9 3.6E-20 1.2E-24 156.3 19.0 157 1-159 667-830 (1249)
112 4ggc_A P55CDC, cell division c 99.9 6.7E-20 2.3E-24 133.1 17.7 146 2-157 161-315 (318)
113 4a11_B DNA excision repair pro 99.9 1.1E-19 3.7E-24 136.1 19.0 147 2-159 55-220 (408)
114 1yfq_A Cell cycle arrest prote 99.9 1.6E-20 5.5E-25 137.8 13.8 143 2-157 22-179 (342)
115 1pgu_A Actin interacting prote 99.8 4.2E-20 1.4E-24 145.2 15.9 150 2-159 77-240 (615)
116 1p22_A F-BOX/WD-repeat protein 99.8 4.6E-20 1.6E-24 140.2 15.2 143 2-160 265-417 (435)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.6E-19 8.7E-24 136.3 19.1 149 2-158 288-443 (445)
118 1p22_A F-BOX/WD-repeat protein 99.8 1.7E-19 5.9E-24 137.0 17.8 142 2-159 142-287 (435)
119 1yfq_A Cell cycle arrest prote 99.8 7.2E-20 2.5E-24 134.3 15.0 154 3-159 112-284 (342)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.1E-19 7.2E-24 136.8 18.0 141 2-158 128-269 (445)
121 4gga_A P55CDC, cell division c 99.8 3E-19 1E-23 135.2 18.6 144 3-159 116-263 (420)
122 1l0q_A Surface layer protein; 99.8 1.1E-18 3.7E-23 130.5 17.5 144 3-159 2-149 (391)
123 4ggc_A P55CDC, cell division c 99.8 3.8E-18 1.3E-22 123.8 18.6 143 4-159 37-183 (318)
124 2w18_A PALB2, fancn, partner a 99.8 8.3E-19 2.8E-23 127.7 14.6 151 2-162 144-319 (356)
125 3bws_A Protein LP49; two-domai 99.8 1.1E-18 3.9E-23 132.0 15.6 146 2-158 133-293 (433)
126 2oit_A Nucleoporin 214KDA; NH2 99.8 2.8E-19 9.5E-24 136.0 12.2 146 2-156 47-222 (434)
127 1l0q_A Surface layer protein; 99.8 1.2E-17 4E-22 124.9 18.1 145 2-159 42-191 (391)
128 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.8E-17 9.7E-22 124.3 17.4 133 13-158 159-301 (415)
129 3bws_A Protein LP49; two-domai 99.8 2.1E-17 7.2E-22 125.0 16.4 145 2-158 180-335 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.3E-16 4.4E-21 120.7 18.4 146 1-159 188-346 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.7 8.7E-16 3E-20 123.6 15.0 141 1-146 46-227 (741)
132 1xfd_A DIP, dipeptidyl aminope 99.7 2.4E-16 8.2E-21 126.5 10.9 142 2-146 27-191 (723)
133 1nir_A Nitrite reductase; hemo 99.7 4.5E-15 1.5E-19 115.8 17.6 153 2-158 148-312 (543)
134 3u4y_A Uncharacterized protein 99.7 5.9E-15 2E-19 107.8 17.0 143 3-157 10-160 (331)
135 1z68_A Fibroblast activation p 99.7 3.5E-16 1.2E-20 125.6 11.2 140 2-146 26-187 (719)
136 1ri6_A Putative isomerase YBHE 99.7 1.9E-15 6.6E-20 110.6 14.3 145 3-157 5-160 (343)
137 1pby_B Quinohemoprotein amine 99.7 3.1E-15 1.1E-19 109.2 15.3 145 4-159 2-165 (337)
138 2ojh_A Uncharacterized protein 99.7 2.7E-15 9.2E-20 107.3 14.6 138 2-148 139-292 (297)
139 1k32_A Tricorn protease; prote 99.6 8.5E-15 2.9E-19 122.2 16.4 141 2-154 347-499 (1045)
140 3vgz_A Uncharacterized protein 99.6 2.3E-14 8E-19 105.3 16.0 147 2-159 151-305 (353)
141 2ojh_A Uncharacterized protein 99.6 2.7E-14 9.1E-19 102.1 15.9 146 2-158 95-259 (297)
142 1jmx_B Amine dehydrogenase; ox 99.6 1.1E-14 3.9E-19 106.8 13.7 149 2-159 10-177 (349)
143 3o4h_A Acylamino-acid-releasin 99.6 6.8E-15 2.3E-19 115.6 12.5 136 4-155 124-274 (582)
144 1xfd_A DIP, dipeptidyl aminope 99.6 8.5E-15 2.9E-19 117.5 13.1 153 1-158 70-290 (723)
145 1nir_A Nitrite reductase; hemo 99.6 7.2E-14 2.5E-18 109.1 17.6 149 1-160 188-358 (543)
146 3vgz_A Uncharacterized protein 99.6 8.7E-14 3E-18 102.3 16.8 151 2-158 99-263 (353)
147 4a5s_A Dipeptidyl peptidase 4 99.6 1.4E-14 4.9E-19 116.8 13.2 139 2-146 27-189 (740)
148 1pby_B Quinohemoprotein amine 99.6 1.2E-13 4.2E-18 100.7 16.4 143 2-159 92-312 (337)
149 3u4y_A Uncharacterized protein 99.6 1.2E-13 4E-18 100.9 16.3 151 2-159 50-209 (331)
150 1k32_A Tricorn protease; prote 99.6 2.8E-14 9.5E-19 119.1 14.3 143 2-158 307-462 (1045)
151 1ri6_A Putative isomerase YBHE 99.6 6.7E-14 2.3E-18 102.3 13.8 146 2-157 48-209 (343)
152 2ecf_A Dipeptidyl peptidase IV 99.6 6E-14 2E-18 113.0 14.4 148 1-159 118-323 (741)
153 2z3z_A Dipeptidyl aminopeptida 99.6 3.1E-14 1.1E-18 114.1 12.5 137 12-158 100-294 (706)
154 1z68_A Fibroblast activation p 99.6 1.6E-14 5.3E-19 116.1 10.7 149 1-154 69-284 (719)
155 3scy_A Hypothetical bacterial 99.6 7.1E-13 2.4E-17 98.1 18.2 146 2-156 165-336 (361)
156 2z3z_A Dipeptidyl aminopeptida 99.6 1.5E-13 5.1E-18 110.1 15.3 152 1-156 130-341 (706)
157 3o4h_A Acylamino-acid-releasin 99.5 6.6E-14 2.2E-18 110.0 10.7 136 2-155 160-311 (582)
158 4a5s_A Dipeptidyl peptidase 4 99.5 2.2E-13 7.6E-18 109.9 13.4 154 1-159 71-296 (740)
159 3scy_A Hypothetical bacterial 99.5 2.9E-12 9.8E-17 94.8 18.3 150 2-156 108-290 (361)
160 3hfq_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 93.9 17.7 147 2-156 151-316 (347)
161 1jmx_B Amine dehydrogenase; ox 99.5 1.1E-12 3.7E-17 96.2 14.9 143 2-159 102-327 (349)
162 3hfq_A Uncharacterized protein 99.5 2.6E-12 8.9E-17 94.5 17.0 154 2-157 96-271 (347)
163 1jof_A Carboxy-CIS,CIS-muconat 99.5 5.2E-12 1.8E-16 93.8 18.5 145 11-156 117-290 (365)
164 1q7f_A NHL, brain tumor CG1071 99.5 4.2E-12 1.4E-16 91.0 16.7 146 2-157 131-280 (286)
165 3azo_A Aminopeptidase; POP fam 99.4 4.3E-12 1.5E-16 101.0 14.9 154 1-155 139-321 (662)
166 1xip_A Nucleoporin NUP159; bet 99.4 1.3E-11 4.4E-16 92.0 14.1 130 2-144 96-230 (388)
167 3pe7_A Oligogalacturonate lyas 99.4 1.8E-11 6.2E-16 91.2 15.0 135 1-146 45-207 (388)
168 3azo_A Aminopeptidase; POP fam 99.4 7.8E-12 2.7E-16 99.5 13.7 146 2-155 89-270 (662)
169 1jof_A Carboxy-CIS,CIS-muconat 99.4 5.4E-11 1.8E-15 88.3 17.2 148 2-158 155-342 (365)
170 3no2_A Uncharacterized protein 99.3 9.2E-11 3.1E-15 84.0 16.1 148 2-156 4-154 (276)
171 2dg1_A DRP35, lactonase; beta 99.3 3.9E-10 1.3E-14 82.4 17.5 145 2-156 55-212 (333)
172 2gop_A Trilobed protease; beta 99.3 8.2E-11 2.8E-15 86.4 13.6 114 12-145 42-187 (347)
173 3fvz_A Peptidyl-glycine alpha- 99.3 8.6E-11 2.9E-15 86.1 13.5 148 2-157 154-322 (329)
174 3pe7_A Oligogalacturonate lyas 99.3 2.8E-10 9.6E-15 84.7 15.9 149 1-159 90-275 (388)
175 2oiz_A Aromatic amine dehydrog 99.3 1.1E-10 3.9E-15 86.6 13.4 101 11-114 29-146 (361)
176 1qks_A Cytochrome CD1 nitrite 99.3 6.4E-10 2.2E-14 87.2 17.6 110 3-116 167-283 (567)
177 3fvz_A Peptidyl-glycine alpha- 99.3 6.7E-10 2.3E-14 81.3 16.8 150 2-158 101-278 (329)
178 1q7f_A NHL, brain tumor CG1071 99.3 6.2E-10 2.1E-14 79.6 16.1 144 2-155 88-236 (286)
179 3e5z_A Putative gluconolactona 99.2 7.1E-10 2.4E-14 79.8 15.2 142 2-156 38-201 (296)
180 1xip_A Nucleoporin NUP159; bet 99.2 4.1E-10 1.4E-14 84.0 13.6 135 2-158 48-192 (388)
181 2xdw_A Prolyl endopeptidase; a 99.2 4.7E-10 1.6E-14 90.2 13.9 146 1-157 134-320 (710)
182 1rwi_B Serine/threonine-protei 99.2 1.8E-09 6.3E-14 76.4 15.4 148 2-159 118-266 (270)
183 3e5z_A Putative gluconolactona 99.2 2.8E-09 9.5E-14 76.7 15.6 126 13-154 153-283 (296)
184 2xdw_A Prolyl endopeptidase; a 99.2 1E-09 3.5E-14 88.3 14.6 115 35-157 125-268 (710)
185 3dsm_A Uncharacterized protein 99.2 1.9E-09 6.6E-14 78.9 14.8 144 2-158 53-213 (328)
186 3c5m_A Oligogalacturonate lyas 99.2 1E-09 3.5E-14 81.7 13.4 137 13-156 216-381 (396)
187 2oiz_A Aromatic amine dehydrog 99.1 1.8E-09 6.1E-14 80.2 14.3 124 5-140 213-360 (361)
188 2bkl_A Prolyl endopeptidase; m 99.1 5.4E-10 1.8E-14 89.7 12.3 106 33-146 119-245 (695)
189 3c5m_A Oligogalacturonate lyas 99.1 2.8E-10 9.7E-15 84.7 8.3 132 2-145 46-206 (396)
190 3dsm_A Uncharacterized protein 99.1 4.8E-09 1.6E-13 76.8 14.2 144 2-158 94-254 (328)
191 2bkl_A Prolyl endopeptidase; m 99.1 2.7E-09 9.1E-14 85.7 13.5 107 1-110 130-263 (695)
192 2dg1_A DRP35, lactonase; beta 99.1 2.6E-09 8.8E-14 78.0 12.2 128 8-146 22-153 (333)
193 1rwi_B Serine/threonine-protei 99.1 1.6E-08 5.4E-13 71.5 15.6 143 2-156 77-221 (270)
194 3no2_A Uncharacterized protein 99.0 1.1E-08 3.8E-13 73.1 14.3 140 2-156 47-194 (276)
195 3sjl_D Methylamine dehydrogena 99.0 6.9E-09 2.4E-13 77.2 13.1 112 2-116 43-177 (386)
196 2gop_A Trilobed protease; beta 99.0 6.5E-09 2.2E-13 76.2 12.9 127 1-146 68-233 (347)
197 2z2n_A Virginiamycin B lyase; 99.0 7.7E-08 2.6E-12 68.7 17.8 143 2-155 109-253 (299)
198 2z2n_A Virginiamycin B lyase; 99.0 1.4E-07 4.9E-12 67.3 17.7 143 2-156 151-294 (299)
199 1yr2_A Prolyl oligopeptidase; 98.9 1.5E-08 5E-13 82.0 13.1 114 35-157 163-303 (741)
200 2mad_H Methylamine dehydrogena 98.9 2.4E-07 8.3E-12 69.0 17.2 111 2-116 31-165 (373)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 9.7E-08 3.3E-12 68.9 13.8 144 2-156 127-298 (314)
202 2qc5_A Streptogramin B lactona 98.9 5.9E-07 2E-11 64.1 17.6 143 2-155 30-174 (300)
203 2mad_H Methylamine dehydrogena 98.9 5.6E-07 1.9E-11 67.0 17.8 68 2-71 76-162 (373)
204 1yr2_A Prolyl oligopeptidase; 98.8 4.5E-08 1.5E-12 79.2 12.3 144 1-156 172-349 (741)
205 2qc5_A Streptogramin B lactona 98.8 8.6E-07 2.9E-11 63.3 17.4 141 2-154 156-297 (300)
206 3dr2_A Exported gluconolactona 98.8 2.5E-07 8.6E-12 66.8 14.7 141 2-156 55-223 (305)
207 3g4e_A Regucalcin; six bladed 98.8 5.5E-07 1.9E-11 64.8 16.2 141 2-155 24-178 (297)
208 3c75_H MADH, methylamine dehyd 98.8 7.5E-08 2.6E-12 72.8 11.8 102 13-117 99-218 (426)
209 2hz6_A Endoplasmic reticulum t 98.8 6.2E-10 2.1E-14 82.9 -0.3 141 2-158 8-150 (369)
210 3g4e_A Regucalcin; six bladed 98.8 3.4E-07 1.1E-11 66.0 14.0 102 34-143 148-257 (297)
211 3hrp_A Uncharacterized protein 98.7 4.8E-07 1.6E-11 68.3 14.7 148 2-155 141-296 (409)
212 1qks_A Cytochrome CD1 nitrite 98.7 9.2E-08 3.2E-12 75.0 11.1 104 44-158 165-276 (567)
213 2ghs_A AGR_C_1268P; regucalcin 98.7 1E-06 3.5E-11 64.3 15.4 138 3-156 61-209 (326)
214 3dr2_A Exported gluconolactona 98.7 8.9E-07 3E-11 63.9 13.6 123 13-150 169-299 (305)
215 2hz6_A Endoplasmic reticulum t 98.7 1.8E-09 6.3E-14 80.4 -0.7 108 2-116 48-157 (369)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.1E-06 3.7E-11 63.3 13.9 141 2-156 28-206 (314)
217 2qe8_A Uncharacterized protein 98.6 2.4E-06 8.4E-11 62.7 15.5 153 2-156 27-223 (343)
218 3sjl_D Methylamine dehydrogena 98.6 1.1E-06 3.9E-11 65.4 11.7 125 2-138 237-384 (386)
219 2qe8_A Uncharacterized protein 98.5 2.7E-06 9.1E-11 62.6 13.4 136 3-146 132-309 (343)
220 2ghs_A AGR_C_1268P; regucalcin 98.5 9.6E-06 3.3E-10 59.2 16.0 129 2-143 144-287 (326)
221 3hrp_A Uncharacterized protein 98.5 6.3E-06 2.2E-10 62.2 15.3 151 2-155 181-352 (409)
222 1kb0_A Quinohemoprotein alcoho 98.5 1.1E-06 3.7E-11 70.5 11.6 129 4-142 328-534 (677)
223 2ece_A 462AA long hypothetical 98.5 4.7E-06 1.6E-10 63.0 14.0 153 2-156 148-351 (462)
224 3iuj_A Prolyl endopeptidase; h 98.5 6.5E-07 2.2E-11 72.0 10.0 116 33-157 127-268 (693)
225 2ece_A 462AA long hypothetical 98.5 4.3E-06 1.5E-10 63.2 13.6 137 4-147 97-272 (462)
226 1mda_H Methylamine dehydrogena 98.5 1.4E-06 4.6E-11 64.8 10.5 102 4-108 33-158 (368)
227 3iuj_A Prolyl endopeptidase; h 98.5 1.3E-06 4.3E-11 70.3 11.1 105 2-110 139-270 (693)
228 2iwa_A Glutamine cyclotransfer 98.5 4.6E-06 1.6E-10 59.0 12.5 151 3-157 76-237 (266)
229 1yiq_A Quinohemoprotein alcoho 98.4 4.6E-06 1.6E-10 67.0 12.6 79 56-143 455-534 (689)
230 3c75_H MADH, methylamine dehyd 98.3 1.1E-05 3.6E-10 61.1 11.6 75 39-115 323-409 (426)
231 3nol_A Glutamine cyclotransfer 98.3 3.5E-05 1.2E-09 54.2 13.3 138 4-146 98-243 (262)
232 3mbr_X Glutamine cyclotransfer 98.3 4.5E-05 1.6E-09 53.1 13.2 139 3-146 75-223 (243)
233 3nok_A Glutaminyl cyclase; bet 98.3 6.8E-05 2.3E-09 52.8 13.9 138 3-145 106-253 (268)
234 3nok_A Glutaminyl cyclase; bet 98.3 4.4E-05 1.5E-09 53.7 12.9 149 2-160 64-213 (268)
235 1fwx_A Nitrous oxide reductase 98.2 2.3E-05 7.8E-10 61.3 12.5 132 12-157 174-361 (595)
236 1npe_A Nidogen, entactin; glyc 98.2 0.00042 1.4E-08 48.8 18.1 144 3-156 48-197 (267)
237 3hxj_A Pyrrolo-quinoline quino 98.2 4.1E-05 1.4E-09 55.4 12.7 133 5-154 109-241 (330)
238 3tc9_A Hypothetical hydrolase; 98.2 0.00013 4.3E-09 55.4 15.7 140 3-155 150-299 (430)
239 1mda_H Methylamine dehydrogena 98.2 4.2E-05 1.4E-09 56.8 12.8 79 40-120 269-358 (368)
240 1fwx_A Nitrous oxide reductase 98.2 8.8E-05 3E-09 58.0 14.8 147 2-160 100-311 (595)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00016 5.5E-09 53.5 15.8 136 4-154 240-375 (376)
242 2iwa_A Glutamine cyclotransfer 98.2 9.1E-05 3.1E-09 52.4 13.5 149 2-160 31-184 (266)
243 2ad6_A Methanol dehydrogenase 98.2 2.9E-05 1E-09 61.1 11.6 63 55-119 443-505 (571)
244 3nol_A Glutamine cyclotransfer 98.2 4.5E-05 1.6E-09 53.6 11.3 148 2-160 52-204 (262)
245 2xe4_A Oligopeptidase B; hydro 98.1 5.8E-05 2E-09 61.3 13.3 105 2-109 185-305 (751)
246 2fp8_A Strictosidine synthase; 98.1 0.00026 8.8E-09 51.3 15.4 144 2-156 29-215 (322)
247 1npe_A Nidogen, entactin; glyc 98.1 0.0011 3.6E-08 46.7 17.5 106 3-110 91-200 (267)
248 1yiq_A Quinohemoprotein alcoho 98.1 0.00016 5.5E-09 58.2 14.3 55 15-70 277-343 (689)
249 3qqz_A Putative uncharacterize 98.0 0.00034 1.2E-08 49.2 14.0 127 29-156 21-150 (255)
250 3hxj_A Pyrrolo-quinoline quino 98.0 0.00018 6.1E-09 52.0 12.6 139 2-158 187-325 (330)
251 2xe4_A Oligopeptidase B; hydro 98.0 8.2E-05 2.8E-09 60.4 11.8 112 36-157 175-304 (751)
252 3mbr_X Glutamine cyclotransfer 98.0 0.00048 1.6E-08 47.9 13.6 146 3-160 31-182 (243)
253 1kb0_A Quinohemoprotein alcoho 98.0 0.0003 1E-08 56.5 14.0 58 14-72 284-353 (677)
254 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00032 1.1E-08 51.9 13.3 110 3-118 53-172 (376)
255 1flg_A Protein (quinoprotein e 97.9 0.00016 5.5E-09 57.0 11.9 80 55-143 465-545 (582)
256 3qqz_A Putative uncharacterize 97.8 0.0028 9.7E-08 44.5 15.3 152 2-156 80-250 (255)
257 2p4o_A Hypothetical protein; p 97.8 0.0044 1.5E-07 44.5 17.5 105 2-109 42-148 (306)
258 4hw6_A Hypothetical protein, I 97.8 0.002 6.8E-08 48.9 15.1 131 3-145 153-290 (433)
259 1kv9_A Type II quinohemoprotei 97.8 0.00027 9.1E-09 56.7 10.7 62 55-118 437-498 (668)
260 2p9w_A MAL S 1 allergenic prot 97.8 0.0039 1.3E-07 45.4 15.6 151 2-156 24-214 (334)
261 3v64_C Agrin; beta propeller, 97.7 0.0044 1.5E-07 45.6 16.1 104 3-108 85-191 (349)
262 1w6s_A Methanol dehydrogenase 97.7 0.00051 1.7E-08 54.3 11.6 62 55-118 452-513 (599)
263 2fp8_A Strictosidine synthase; 97.7 0.002 7E-08 46.6 14.1 134 13-156 165-312 (322)
264 3v65_B Low-density lipoprotein 97.7 0.0046 1.6E-07 46.2 15.6 104 3-108 128-234 (386)
265 3sov_A LRP-6, low-density lipo 97.6 0.0078 2.7E-07 43.7 16.2 104 3-107 47-153 (318)
266 3kya_A Putative phosphatase; s 97.6 0.0033 1.1E-07 48.5 14.5 101 3-107 152-277 (496)
267 3pbp_A Nucleoporin NUP82; beta 97.6 0.01 3.6E-07 44.7 15.8 128 13-143 41-195 (452)
268 1ijq_A LDL receptor, low-densi 97.6 0.011 3.9E-07 42.7 16.9 104 3-107 42-151 (316)
269 1k3i_A Galactose oxidase precu 97.5 0.0092 3.1E-07 47.7 16.4 109 2-110 197-325 (656)
270 3p5b_L Low density lipoprotein 97.4 0.021 7E-07 42.9 17.4 134 3-145 124-263 (400)
271 1kv9_A Type II quinohemoprotei 97.4 0.0035 1.2E-07 50.3 12.4 114 3-117 117-288 (668)
272 3v64_C Agrin; beta propeller, 97.4 0.022 7.4E-07 41.9 17.5 106 2-109 127-235 (349)
273 3v65_B Low-density lipoprotein 97.4 0.024 8.2E-07 42.3 16.4 105 3-109 171-278 (386)
274 2p4o_A Hypothetical protein; p 97.4 0.0068 2.3E-07 43.5 12.7 127 4-143 129-273 (306)
275 3m0c_C LDL receptor, low-densi 97.3 0.03 1E-06 45.8 16.9 106 3-109 436-547 (791)
276 3sre_A PON1, serum paraoxonase 97.3 0.029 1E-06 41.4 15.2 135 11-156 81-251 (355)
277 3amr_A 3-phytase; beta-propell 97.2 0.036 1.2E-06 40.8 16.4 143 6-156 90-262 (355)
278 4a2l_A BT_4663, two-component 97.2 0.063 2.2E-06 43.9 18.0 142 7-156 324-479 (795)
279 3sov_A LRP-6, low-density lipo 97.2 0.035 1.2E-06 40.3 17.4 105 2-108 90-197 (318)
280 4a2l_A BT_4663, two-component 97.2 0.057 2E-06 44.1 17.7 144 6-156 370-525 (795)
281 1ijq_A LDL receptor, low-densi 97.1 0.041 1.4E-06 39.8 17.9 103 3-108 89-195 (316)
282 1n7d_A LDL receptor, low-densi 97.0 0.006 2E-07 49.3 10.2 103 3-108 465-571 (699)
283 4hw6_A Hypothetical protein, I 97.0 0.068 2.3E-06 40.5 15.8 107 2-110 239-375 (433)
284 2ad6_A Methanol dehydrogenase 97.0 0.048 1.7E-06 42.9 14.9 57 14-72 273-342 (571)
285 3tc9_A Hypothetical hydrolase; 97.0 0.031 1.1E-06 42.3 13.2 73 35-107 226-300 (430)
286 1n7d_A LDL receptor, low-densi 96.9 0.0044 1.5E-07 50.0 8.7 104 3-107 418-527 (699)
287 3m0c_C LDL receptor, low-densi 96.9 0.14 4.8E-06 42.0 17.7 105 3-110 483-591 (791)
288 3pbp_A Nucleoporin NUP82; beta 96.8 0.064 2.2E-06 40.5 13.5 103 2-105 76-209 (452)
289 3s94_A LRP-6, low-density lipo 96.8 0.14 4.7E-06 40.8 16.2 104 3-107 52-158 (619)
290 2p9w_A MAL S 1 allergenic prot 96.8 0.058 2E-06 39.3 12.7 96 12-108 99-215 (334)
291 3a9g_A Putative uncharacterize 96.7 0.063 2.2E-06 39.5 13.0 92 2-96 39-153 (354)
292 3sre_A PON1, serum paraoxonase 96.7 0.09 3.1E-06 38.8 13.6 101 4-108 128-252 (355)
293 1tl2_A L10, protein (tachylect 96.7 0.008 2.7E-07 41.2 7.4 107 35-149 41-155 (236)
294 1k3i_A Galactose oxidase precu 96.7 0.026 8.9E-07 45.1 11.6 112 39-157 190-323 (656)
295 3p5b_L Low density lipoprotein 96.7 0.13 4.3E-06 38.6 18.0 106 2-109 170-278 (400)
296 3amr_A 3-phytase; beta-propell 96.6 0.14 4.8E-06 37.7 15.7 111 5-116 145-272 (355)
297 1w6s_A Methanol dehydrogenase 96.5 0.037 1.3E-06 43.8 11.2 77 40-116 246-350 (599)
298 2ism_A Putative oxidoreductase 96.5 0.095 3.3E-06 38.5 12.7 93 2-96 41-153 (352)
299 3v9f_A Two-component system se 96.5 0.16 5.6E-06 41.4 15.1 141 7-155 377-522 (781)
300 1tl2_A L10, protein (tachylect 96.5 0.091 3.1E-06 36.0 11.4 112 37-157 90-208 (236)
301 1flg_A Protein (quinoprotein e 96.4 0.088 3E-06 41.6 12.6 62 56-117 291-364 (582)
302 4a0p_A LRP6, LRP-6, low-densit 96.4 0.27 9.1E-06 39.3 18.1 106 2-109 48-156 (628)
303 2be1_A Serine/threonine-protei 96.4 0.011 3.9E-07 43.2 6.9 115 3-118 10-140 (339)
304 1cru_A Protein (soluble quinop 96.2 0.26 9.1E-06 37.6 14.0 96 2-97 37-163 (454)
305 2ism_A Putative oxidoreductase 96.1 0.26 8.8E-06 36.2 13.2 107 34-145 30-152 (352)
306 3v9f_A Two-component system se 96.0 0.49 1.7E-05 38.6 15.9 141 3-155 418-566 (781)
307 2xbg_A YCF48-like protein; pho 96.0 0.27 9.4E-06 35.6 15.8 111 33-151 203-316 (327)
308 2xbg_A YCF48-like protein; pho 95.8 0.36 1.2E-05 35.0 16.6 113 32-150 160-272 (327)
309 3das_A Putative oxidoreductase 95.8 0.39 1.3E-05 35.3 13.6 95 2-96 42-158 (347)
310 3a9g_A Putative uncharacterize 95.7 0.18 6.1E-06 37.1 10.8 105 34-145 28-152 (354)
311 1cru_A Protein (soluble quinop 95.5 0.42 1.4E-05 36.5 12.5 61 34-94 26-96 (454)
312 3das_A Putative oxidoreductase 95.5 0.5 1.7E-05 34.7 13.4 79 30-108 27-116 (347)
313 3kya_A Putative phosphatase; s 95.5 0.64 2.2E-05 36.0 14.8 157 2-160 258-478 (496)
314 4a0p_A LRP6, LRP-6, low-densit 95.4 0.8 2.7E-05 36.6 17.2 103 3-107 352-464 (628)
315 3s94_A LRP-6, low-density lipo 95.4 0.8 2.7E-05 36.5 17.2 104 2-107 360-466 (619)
316 3sbq_A Nitrous-oxide reductase 94.9 0.48 1.6E-05 37.3 11.0 93 15-108 300-408 (638)
317 2g8s_A Glucose/sorbosone dehyd 94.9 0.63 2.1E-05 34.2 11.4 95 2-97 28-149 (353)
318 2be1_A Serine/threonine-protei 94.8 0.029 9.8E-07 41.1 3.9 70 4-74 57-139 (339)
319 2g8s_A Glucose/sorbosone dehyd 94.7 0.62 2.1E-05 34.2 10.9 108 35-145 18-147 (353)
320 2xn4_A Kelch-like protein 2; s 93.9 0.74 2.5E-05 32.6 9.9 102 2-110 155-278 (302)
321 2vpj_A Kelch-like protein 12; 93.6 0.68 2.3E-05 32.7 9.1 102 2-109 159-279 (301)
322 2xn4_A Kelch-like protein 2; s 93.4 1.4 4.9E-05 31.1 11.3 102 2-110 108-231 (302)
323 3ii7_A Kelch-like protein 7; p 93.2 1.6 5.4E-05 30.9 11.5 102 2-110 55-180 (306)
324 3s25_A Hypothetical 7-bladed b 93.1 1.7 5.8E-05 31.2 10.9 109 13-145 129-240 (302)
325 1zgk_A Kelch-like ECH-associat 92.7 1.9 6.5E-05 30.6 12.5 102 2-110 121-242 (308)
326 2vpj_A Kelch-like protein 12; 92.4 2 7E-05 30.2 13.4 105 2-110 62-186 (301)
327 1zgk_A Kelch-like ECH-associat 92.3 2.2 7.4E-05 30.3 10.5 101 2-109 168-288 (308)
328 3ei3_A DNA damage-binding prot 92.2 2.1 7.3E-05 36.8 11.4 103 2-108 895-999 (1158)
329 4asc_A Kelch repeat and BTB do 91.9 2.4 8.3E-05 30.1 11.4 102 2-110 98-223 (315)
330 4asc_A Kelch repeat and BTB do 91.9 1.5 5.1E-05 31.3 9.0 62 2-67 148-223 (315)
331 2xzh_A Clathrin heavy chain 1; 91.5 3.1 0.00011 30.5 13.5 119 12-143 48-167 (365)
332 2uvk_A YJHT; unknown function, 91.5 2.4 8.1E-05 30.8 9.8 93 2-98 19-128 (357)
333 3zwu_A Alkaline phosphatase PH 91.2 1.1 3.9E-05 35.4 8.1 60 36-95 477-548 (592)
334 4a9v_A PHOX; hydrolase, beta-p 90.8 2 6.7E-05 33.9 9.0 61 35-95 476-548 (592)
335 2xzh_A Clathrin heavy chain 1; 90.7 3.8 0.00013 30.1 13.0 107 13-121 180-303 (365)
336 3ii7_A Kelch-like protein 7; p 90.4 3.5 0.00012 29.1 13.0 101 3-110 12-129 (306)
337 2zwa_A Leucine carboxyl methyl 89.7 6.6 0.00023 31.7 11.6 107 2-110 397-524 (695)
338 3ei3_A DNA damage-binding prot 89.5 9.7 0.00033 32.9 15.4 100 5-106 525-634 (1158)
339 2wg3_C Hedgehog-interacting pr 89.4 6 0.0002 30.3 11.8 54 35-88 14-79 (463)
340 2woz_A Kelch repeat and BTB do 89.3 4.5 0.00015 28.8 10.6 102 2-110 109-233 (318)
341 2zwa_A Leucine carboxyl methyl 88.9 4.1 0.00014 32.9 9.9 106 2-110 500-637 (695)
342 3s25_A Hypothetical 7-bladed b 87.3 6.4 0.00022 28.2 13.3 97 40-155 58-172 (302)
343 3sbq_A Nitrous-oxide reductase 85.9 12 0.0004 29.8 10.3 63 2-65 333-408 (638)
344 4gq2_M Nucleoporin NUP120; bet 85.9 1.7 5.8E-05 36.6 6.2 37 79-115 237-273 (950)
345 4gq2_M Nucleoporin NUP120; bet 85.4 4.5 0.00016 34.1 8.5 37 36-72 237-273 (950)
346 1bpo_A Protein (clathrin); cla 84.5 12 0.00041 28.8 16.0 106 13-120 179-301 (494)
347 2uvk_A YJHT; unknown function, 84.1 9.9 0.00034 27.4 9.2 50 2-55 65-128 (357)
348 1xi4_A Clathrin heavy chain; a 82.4 14 0.00048 32.9 10.1 104 11-116 177-297 (1630)
349 4fhn_B Nucleoporin NUP120; pro 81.0 1.7 6E-05 37.3 4.5 37 79-115 239-275 (1139)
350 3zwu_A Alkaline phosphatase PH 80.7 5.4 0.00019 31.6 6.8 60 79-145 477-548 (592)
351 4a9v_A PHOX; hydrolase, beta-p 77.4 12 0.0004 29.7 7.6 61 78-145 476-548 (592)
352 3f7f_A Nucleoporin NUP120; nuc 74.7 7 0.00024 31.8 5.9 36 80-117 224-259 (729)
353 2woz_A Kelch repeat and BTB do 69.8 26 0.0009 24.7 13.0 100 4-110 17-138 (318)
354 4fhn_B Nucleoporin NUP120; pro 68.5 3.8 0.00013 35.2 3.4 36 37-72 240-275 (1139)
355 1bpo_A Protein (clathrin); cla 67.9 40 0.0014 26.0 14.1 75 35-110 259-333 (494)
356 3ott_A Two-component system se 63.6 58 0.002 26.4 16.5 97 8-110 117-222 (758)
357 3f7f_A Nucleoporin NUP120; nuc 62.7 15 0.0005 30.0 5.4 34 37-72 224-257 (729)
358 3no0_A DNA gyrase subunit A; D 60.0 42 0.0014 23.6 16.6 104 3-107 80-195 (276)
359 3ott_A Two-component system se 57.7 75 0.0026 25.7 15.9 71 36-110 192-262 (758)
360 2wg3_C Hedgehog-interacting pr 55.4 68 0.0023 24.5 12.3 91 5-98 29-159 (463)
361 3qhy_B Beta-lactamase inhibito 52.0 58 0.002 22.8 12.5 88 12-107 80-167 (282)
362 3qhy_B Beta-lactamase inhibito 46.0 74 0.0025 22.3 12.5 89 12-108 119-207 (282)
363 1q47_A Semaphorin 3A; beta pro 45.9 89 0.003 24.2 7.2 56 5-60 423-487 (495)
364 1b2p_A Protein (lectin); manno 40.9 57 0.0019 19.5 8.4 25 81-107 63-87 (119)
365 3mez_B Mannose-specific lectin 40.6 55 0.0019 19.3 9.0 61 46-108 24-84 (113)
366 1xi4_A Clathrin heavy chain; a 40.6 2.1E+02 0.0073 26.0 11.8 72 36-108 260-331 (1630)
367 3b7f_A Glycosyl hydrolase, BNR 40.5 1E+02 0.0036 22.4 11.7 52 4-56 23-77 (394)
368 3q6k_A 43.2 kDa salivary prote 37.9 1.2E+02 0.0042 22.5 16.7 105 3-108 171-306 (381)
369 3q6k_A 43.2 kDa salivary prote 37.6 1.3E+02 0.0043 22.5 10.8 123 35-157 87-253 (381)
370 3a0c_A Mannose/sialic acid-bin 36.2 65 0.0022 18.8 9.2 25 81-107 53-77 (110)
371 3elq_A Arylsulfate sulfotransf 33.7 1.8E+02 0.0061 23.1 11.8 39 79-119 356-395 (571)
372 3al9_A Plexin-A2; beta-propell 30.5 99 0.0034 24.3 5.4 57 4-60 414-476 (539)
373 3al9_A Plexin-A2; beta-propell 29.5 1.5E+02 0.005 23.3 6.1 68 36-103 401-476 (539)
374 4gz8_A Semaphorin-3A; multi-do 28.4 2E+02 0.0067 23.4 6.8 60 4-64 430-498 (667)
375 3nvq_A Semaphorin-7A; beta-pro 27.5 2.2E+02 0.0075 22.7 6.8 55 5-60 382-444 (590)
376 3ol2_B Plexin-B1; beta-propell 27.2 2.1E+02 0.0073 22.4 6.6 68 36-103 388-461 (528)
377 1q47_A Semaphorin 3A; beta pro 24.3 2.5E+02 0.0085 21.8 7.7 68 36-103 405-487 (495)
378 1ukf_A Avirulence protein AVRP 23.9 86 0.0029 20.7 3.3 33 78-110 119-152 (188)
379 1olz_A Semaphorin 4D; developm 22.5 3.1E+02 0.011 22.2 7.4 56 5-60 417-477 (663)
380 3uc1_A DNA gyrase subunit A; D 22.1 2.3E+02 0.0077 20.5 16.7 105 2-107 108-227 (327)
381 1sr4_A CDT A, cytolethal diste 20.2 2E+02 0.0068 19.3 4.6 60 52-115 104-166 (206)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=9.7e-28 Score=175.88 Aligned_cols=145 Identities=15% Similarity=0.231 Sum_probs=129.8
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.+|++|+.|+.|++||+++ ++.+..+.+|..+|.+++|+|++.+|++++.|+.|++||++++.....+ .+|...|
T Consensus 174 pdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~h~~~v 251 (321)
T 3ow8_A 174 PDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL-SGHASWV 251 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE-CCCSSCE
T ss_pred CCCCEEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE-cCCCCce
Confidence 3788999999999999999987 5778888999999999999999999999999999999999988776655 6788899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeec
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNA 155 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~ 155 (197)
.+++|+|++++|++++.|+.|++||+.+++.+..+..+... |.+++|+|++++|++++ ++.+.+|+.
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~--------v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQ--------VWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC--------EEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCc--------EEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999988888766543 78999999999888665 458899985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.4e-27 Score=173.79 Aligned_cols=151 Identities=11% Similarity=0.204 Sum_probs=132.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.+|++|+.|+.|++||+.. +.....+..+...+.+++|+|++.+|++++.|+.|++||+.++..+..+ .+|...|
T Consensus 132 pdg~~l~~g~~dg~v~i~~~~~-~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-~~h~~~v 209 (321)
T 3ow8_A 132 PDSQYLATGTHVGKVNIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPI 209 (321)
T ss_dssp TTSSEEEEECTTSEEEEEETTT-CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCC
T ss_pred CCCCEEEEEcCCCcEEEEEcCC-CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-cccCCce
Confidence 3688999999999999999987 5667778888899999999999999999999999999999999877665 5677899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.+++|+|++++|++++.|+.|++||+++++....+.++... |.+++|+|++.+|++++ +..+.+|++...+
T Consensus 210 ~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~--------v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 210 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASW--------VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp CEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSC--------EEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCc--------eEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 99999999999999999999999999998888777666543 78999999999998766 4589999987654
Q ss_pred HH
Q psy18074 160 RA 161 (197)
Q Consensus 160 ~~ 161 (197)
..
T Consensus 282 ~~ 283 (321)
T 3ow8_A 282 CV 283 (321)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.6e-26 Score=170.51 Aligned_cols=144 Identities=17% Similarity=0.279 Sum_probs=125.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceee-cccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~v 80 (197)
++.++++|+.|+.|++||++. +.+...+.+|...|.+++|+|++..|++++.|+.|++||++++..+..+. ..+...|
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCEEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 678999999999999999987 57788889999999999999999999999999999999999887655542 2233579
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEee
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYN 154 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~ 154 (197)
.+++|+|+|+++++|+.|+.|++||+.+++.+..+.+|.. .|.+++|+|+|.+|++++. ..+.||+
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~--------~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN--------RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC--------cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999888877766654 3789999999999997764 5789995
No 4
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=1.1e-26 Score=173.93 Aligned_cols=153 Identities=16% Similarity=0.270 Sum_probs=127.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK------ 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~------ 75 (197)
++++|++|+.|+.|++||++....++..+.+|.+.|.+++|+|++..|++++.|+.|++||++++..+..+...
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 67899999999999999998545778889999999999999999999999999999999999998876655221
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEee
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYN 154 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~ 154 (197)
+...|.+++|+|+|+++++|+.||.|++||+.+++.+..+... ...|...|.+++|+|+|.+|++++. ..+.||+
T Consensus 297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~----~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL----QNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS----CSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc----cCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 1235899999999999999999999999999988877655221 1123345899999999999998774 5889999
Q ss_pred cchh
Q psy18074 155 AQAE 158 (197)
Q Consensus 155 ~~~~ 158 (197)
+...
T Consensus 373 ~~~~ 376 (380)
T 3iz6_a 373 FSGH 376 (380)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 8654
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=1.2e-26 Score=168.75 Aligned_cols=148 Identities=9% Similarity=0.105 Sum_probs=127.3
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.++++|+.|+.|++||+.+ +..+..+..|..+|.+++|+|++..|++|+.|+.|++||+.+++.+..+ .+|...|
T Consensus 23 p~~~~l~s~~~dg~v~lWd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~-~~h~~~v 100 (304)
T 2ynn_A 23 PTEPWVLTTLYSGRVELWNYET-QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF-EAHPDYI 100 (304)
T ss_dssp SSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEcCCCcEEEEECCC-CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE-eCCCCcE
Confidence 4789999999999999999987 5678888899999999999999999999999999999999999877665 5688999
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCce-eeeeccccccccccccccceecccCc-ccceeeeec-CcceEEeecch
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEK-LGYVNNKQRQALDYSESLKQKYAHHP-QIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~~~~i~~~~~ 157 (197)
.+++|+|++++|++++.|+.|++||+.++.. ...+.++.. .|.+++|+| ++..|++++ +..+.+|++..
T Consensus 101 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~--------~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH--------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS--------CEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC--------cEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 9999999999999999999999999987744 344544443 478999999 678888665 55899999864
Q ss_pred h
Q psy18074 158 E 158 (197)
Q Consensus 158 ~ 158 (197)
.
T Consensus 173 ~ 173 (304)
T 2ynn_A 173 S 173 (304)
T ss_dssp S
T ss_pred C
Confidence 4
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=2e-26 Score=174.15 Aligned_cols=148 Identities=12% Similarity=0.171 Sum_probs=131.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.+|++|+.|+.|++||+.+ +.....+.+|...|.+++|+|++..|++|+.|+.|++||+.++.++..+ .+|...|.
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~-~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~~V~ 196 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYET-GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVS 196 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTT-CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC-CCCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-cCCCCCEE
Confidence 678999999999999999987 5778889999999999999999999999999999999999988876665 56888999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
+++|+|+++++++++.|+.|++||+.++..+..+.++.. .+.+++|+|++.+|++++ +..+.+|+....+
T Consensus 197 ~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~--------~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE--------WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc--------cEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 999999999999999999999999999998888776654 378999999999998766 5589999986543
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=7.2e-26 Score=164.67 Aligned_cols=151 Identities=14% Similarity=0.242 Sum_probs=129.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.+|++|+.|+.|++||++........+.+|...|.+++|+| ++..|++|+.|+.|++||+.++.....+..+|...+
T Consensus 108 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v 187 (304)
T 2ynn_A 108 TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV 187 (304)
T ss_dssp SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCE
T ss_pred CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcE
Confidence 6789999999999999999864455677889999999999999 578999999999999999988776666656666789
Q ss_pred eEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecch
Q psy18074 81 THTVWSL--DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 81 ~~v~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~ 157 (197)
..++|+| ++++|++++.|+.|++||+.+++.+..+.++... |.+++|+|++.+|++++ ++.+.+|+...
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~--------v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN--------VSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSC--------EEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCC--------EEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999987 6789999999999999999999988888776654 78999999999998766 45899999876
Q ss_pred hhH
Q psy18074 158 EHR 160 (197)
Q Consensus 158 ~~~ 160 (197)
.+.
T Consensus 260 ~~~ 262 (304)
T 2ynn_A 260 YKV 262 (304)
T ss_dssp CCE
T ss_pred Cce
Confidence 543
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=5.8e-26 Score=168.52 Aligned_cols=144 Identities=17% Similarity=0.304 Sum_probs=124.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec-ccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-KRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~~~~~v 80 (197)
++.+|++|+.|+.|++||+++ +.++..+..|...|.+++|+|++..|++++.|+.|++||++.+.....+.. .+...+
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~ 287 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGA 287 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccce
Confidence 468999999999999999987 577888899999999999999999999999999999999998876554422 223578
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEee
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYN 154 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~ 154 (197)
.+++|+|++++|++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+|++|++++. +.+.+|+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~--------~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN--------RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--------CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC--------cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999988877766654 3789999999999997765 4788884
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=4.3e-26 Score=168.62 Aligned_cols=150 Identities=11% Similarity=0.113 Sum_probs=124.3
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCcccceee-ccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQ 78 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~ 78 (197)
.+|.+|++|+.|+.|++||+.+ +.++..+.+|.+.|.+++|+|++. .|++++.|+.|++||+++++....+. ..+..
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~-~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQ-QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY 215 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred CCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeec
Confidence 3789999999999999999987 678889999999999999999885 78899999999999999988766552 33446
Q ss_pred ceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccc-ceeeeec-CcceEEeec
Q psy18074 79 HVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQI-RRIARHR-QVPRHIYNA 155 (197)
Q Consensus 79 ~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~-~~~~~i~~~ 155 (197)
.+.+++|+|+ ++++++|+.||.|++||+++++.+..+.++... |.+++|+|++ ++|++++ +..+.||+.
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~--------v~~v~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC--------VTGLVFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC--------EEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC--------EEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence 7899999995 578889999999999999999988888766554 7899999998 5677665 568999998
Q ss_pred chhh
Q psy18074 156 QAEH 159 (197)
Q Consensus 156 ~~~~ 159 (197)
...+
T Consensus 288 ~~~~ 291 (344)
T 4gqb_B 288 SLSE 291 (344)
T ss_dssp TCCE
T ss_pred CCCc
Confidence 6553
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.6e-26 Score=170.64 Aligned_cols=149 Identities=17% Similarity=0.220 Sum_probs=127.2
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEE
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT 83 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v 83 (197)
..+++++.|+.|++||+.+ +.+...+.+|.+.|.+++|+|++..+++++.|+.|++||++++.....+ .+|...|.++
T Consensus 155 ~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~-~~h~~~v~~v 232 (340)
T 1got_B 155 NQIVTSSGDTTCALWDIET-GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAI 232 (340)
T ss_dssp TEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEE
T ss_pred CcEEEEECCCcEEEEECCC-CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE-cCCcCCEEEE
Confidence 4588899999999999987 5778888999999999999999999999999999999999998876665 5688899999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCc-ceEEeecchhhH
Q psy18074 84 VWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQV-PRHIYNAQAEHR 160 (197)
Q Consensus 84 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-~~~i~~~~~~~~ 160 (197)
+|+|++++|++++.|+.|++||+++++.+..+..... ...+.+++|+|+|++|+++..+ .+.+|+....+.
T Consensus 233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~------~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI------ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC------CSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc------ccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE
Confidence 9999999999999999999999998887765543221 1236899999999999977654 789999865543
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=8e-26 Score=170.82 Aligned_cols=144 Identities=13% Similarity=0.294 Sum_probs=127.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCC--------------------CCEEEEEeCCCcEEEE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT--------------------GREFVAGGYDKSLRLY 61 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~--------------------~~~l~~~~~d~~v~i~ 61 (197)
++.+|++|+.|+.|++||+.. ......+.+|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw 323 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEE
Confidence 688999999999999999987 5677788899999999999996 6689999999999999
Q ss_pred ECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccce
Q psy18074 62 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 62 d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 141 (197)
|++++.++..+ .+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+.. .|.+++|+|++.+
T Consensus 324 d~~~~~~~~~~-~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~--------~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 324 DVSTGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--------FVTSLDFHKTAPY 394 (410)
T ss_dssp ETTTTEEEEEE-ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS--------CEEEEEECSSSSC
T ss_pred ECCCCceEEEE-ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--------cEEEEEEcCCCCE
Confidence 99999877665 56888999999999999999999999999999999888887766654 3789999999999
Q ss_pred eeeec-CcceEEeec
Q psy18074 142 IARHR-QVPRHIYNA 155 (197)
Q Consensus 142 l~~~~-~~~~~i~~~ 155 (197)
|++++ ++.+.+|+.
T Consensus 395 l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 395 VVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEETTSEEEEEC-
T ss_pred EEEEeCCCcEEEEeC
Confidence 99766 458899985
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=2.3e-25 Score=162.28 Aligned_cols=149 Identities=11% Similarity=0.141 Sum_probs=130.9
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.+|++|+.|+.|++|++.. +.....+.+|...|.+++|+|++..|++++.|+.|++||+.++..+..+ .+|...|
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v 110 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYV 110 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCCEEEEeeCCCeEEEEeCCC-cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE-cCCCCCE
Confidence 3688999999999999999986 5677788899999999999999999999999999999999998876665 5678899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.+++|+|+++++++++.|+.|++||+.+++.+..+..+.. .+.+++|+|++++++++. ++.+.+|+....+
T Consensus 111 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 111 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC--------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999999999999988877766544 378999999999988665 5588999987543
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=6.9e-26 Score=168.12 Aligned_cols=151 Identities=16% Similarity=0.216 Sum_probs=128.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++..|++|+.|+.|++||+.+ +.++..+.+|...|.+++|+| ++..|++|+.|+.|++||++++.+...+ ..|...
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-~~h~~~ 242 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF-ETHESD 242 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSC
T ss_pred CCCEEEEEeCCCcEEEEeCCC-CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCC
Confidence 567899999999999999987 577888999999999999988 4689999999999999999999877665 568889
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEeecchh
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQAE 158 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~~~ 158 (197)
|.+++|+|++.+|++++.|+.|++||+++++.+..+...... ..+.+++|+|++.+|+++.. ..+.+|+....
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~------~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII------FGASSVDFSLSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC------SCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc------cceeEEEEeCCCCEEEEEECCCcEEEEECCCC
Confidence 999999999999999999999999999988776655433211 12578999999999997764 58999998665
Q ss_pred hH
Q psy18074 159 HR 160 (197)
Q Consensus 159 ~~ 160 (197)
+.
T Consensus 317 ~~ 318 (354)
T 2pbi_B 317 SR 318 (354)
T ss_dssp SE
T ss_pred ce
Confidence 43
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=5.6e-26 Score=168.01 Aligned_cols=169 Identities=14% Similarity=0.158 Sum_probs=128.7
Q ss_pred cEEEEEcCCCcEEEEEccCCCCcee----ecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLN----VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
..|++|+.||.|++||+.+. +... .+.+|.+.|.+++|+|++++|++|+.|+.|++||+.++..+..+ .+|...
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~-~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~-~~h~~~ 171 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDEN-ETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSY-RAHAAQ 171 (344)
T ss_dssp TEEEEEETTSEEEEEEECTT-SSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSC
T ss_pred CeEEEEECCCEEEEEeccCC-CceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCcCCc
Confidence 46789999999999999863 3332 34589999999999999999999999999999999999887766 678899
Q ss_pred eeEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcc-cceeeeec-CcceEEeecc
Q psy18074 80 VTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQ-IRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 80 v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~-~~~~~i~~~~ 156 (197)
|.+++|+|++. ++++++.|+.|++||+++++....+...... ..+.+++|+|+ +++++++. ++.+.+|++.
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG------YLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C------CCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceee------ccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 99999999885 6789999999999999998887766433321 23678999995 56777665 5578999997
Q ss_pred hhhHHHHhHhHhhhhhhhcCCCCC
Q psy18074 157 AEHRAIRSKQKRKESNKRTHSAPG 180 (197)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~ 180 (197)
..+.......+........+++.+
T Consensus 246 ~~~~~~~~~~h~~~v~~v~fsp~g 269 (344)
T 4gqb_B 246 STSCVLSSAVHSQCVTGLVFSPHS 269 (344)
T ss_dssp C--CCEEEECCSSCEEEEEECSSS
T ss_pred CCcEEEEEcCCCCCEEEEEEccCC
Confidence 665443333334444455555443
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=4.7e-25 Score=174.28 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=129.9
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec------ccc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT------KRM 77 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~------~~~ 77 (197)
..|++|+.|+.|++||... .+....+.+|...|.+++|+|++.+|++++.|+.|++||+.++.....+.. +|.
T Consensus 161 ~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp CEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 3699999999999999876 566788899999999999999999999999999999999998887665522 688
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccc-----------------------------------ccc
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQ-----------------------------------RQA 122 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----------------------------------~~~ 122 (197)
..|.+++|+|++++|++++.|+.|++||+.+++.+..+..+. ...
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceE
Confidence 999999999999999999999999999999888766553211 012
Q ss_pred cccccccceecccCcccceeeeec-CcceEEeecchh
Q psy18074 123 LDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 123 ~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~ 158 (197)
+..|...|.+++|+|+|++|++++ +..+.+|++...
T Consensus 320 ~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 320 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 335667799999999999999766 558999998654
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=1.2e-24 Score=158.49 Aligned_cols=150 Identities=15% Similarity=0.277 Sum_probs=129.5
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++++|++|+.|+.|++||+.+ +..+..+.+|...|.++.|+|++..|++++.|+.|++||++++.....+ ..|...|
T Consensus 75 ~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v 152 (312)
T 4ery_A 75 SDSNLLVSASDDKTLKIWDVSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPV 152 (312)
T ss_dssp TTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCE
T ss_pred CCCCEEEEECCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcE
Confidence 3688999999999999999987 5778888999999999999999999999999999999999998876665 5577899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.+++|+|+++++++++.|+.|++||+.+++.+..+..... ..+..++|+|++++|+++. ++.+.+|+....+
T Consensus 153 ~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-------PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-------CCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-------CceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999999999999999999999999887766543332 2367899999999988665 5588999987654
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=7e-25 Score=162.12 Aligned_cols=148 Identities=17% Similarity=0.242 Sum_probs=122.7
Q ss_pred CCccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc--eeecccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD--IYHTKRM 77 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~--~~~~~~~ 77 (197)
.++.+|++|+.|+.|++||+.... .....+.+|...|.+++|+|++.+|++++.|+.|++||+..+.... .....|.
T Consensus 71 p~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 71 PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred CCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 378999999999999999987532 3567788999999999999999999999999999999998764322 2235688
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee--eeeccccccccccccccceecccCcccceeeeecC-cceEEee
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYN 154 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~ 154 (197)
..|.+++|+|++++|++++.|+.|++||..+++.. ..+.++. ..|.+++|+|++++|++++. ..+.||+
T Consensus 151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~--------~~v~~l~~sp~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE--------STVWSLAFDPSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS--------SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC--------CceEEEEECCCCCEEEEEeCCCeEEEec
Confidence 89999999999999999999999999999876533 3444444 34789999999999997664 5889998
Q ss_pred cc
Q psy18074 155 AQ 156 (197)
Q Consensus 155 ~~ 156 (197)
..
T Consensus 223 ~~ 224 (345)
T 3fm0_A 223 QY 224 (345)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=1.1e-24 Score=159.43 Aligned_cols=148 Identities=15% Similarity=0.163 Sum_probs=126.9
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.+|++|+.|+.|++||+.+ ++....+.+|...|.+++|+|++..|++++.|+.|++||++.. .+..+ .+|...|
T Consensus 75 ~dg~~l~s~s~D~~v~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~-~~h~~~v 151 (319)
T 3frx_A 75 ADGAYALSASWDKTLRLWDVAT-GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATL-LGHNDWV 151 (319)
T ss_dssp TTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEE-CCCSSCE
T ss_pred CCCCEEEEEeCCCEEEEEECCC-CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEE-eccCCcE
Confidence 3788999999999999999987 5778889999999999999999999999999999999999754 33333 5688899
Q ss_pred eEEEEccC------CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEe
Q psy18074 81 THTVWSLD------NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIY 153 (197)
Q Consensus 81 ~~v~~~~~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~ 153 (197)
.+++|+|. +..+++++.|+.|++||+.+++....+.++... |.+++|+|++++|++++ ++.+.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~--------v~~~~~sp~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLW 223 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC--------EEEEEECTTSSEEEEEETTCEEEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc--------EEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 99999985 448999999999999999988877777665543 78999999999999766 4588999
Q ss_pred ecchhh
Q psy18074 154 NAQAEH 159 (197)
Q Consensus 154 ~~~~~~ 159 (197)
++...+
T Consensus 224 d~~~~~ 229 (319)
T 3frx_A 224 NLAAKK 229 (319)
T ss_dssp ETTTTE
T ss_pred ECCCCc
Confidence 987654
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=8.7e-25 Score=161.61 Aligned_cols=150 Identities=12% Similarity=0.244 Sum_probs=120.1
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCC--ceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc-eeecccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD-IYHTKRM 77 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~-~~~~~~~ 77 (197)
.+|.+|++|+.|+.|++||+..... ......+|...|.+++|+|++.+|++++.|+.+++|++..+.... ....+|.
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~ 105 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE 105 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC
Confidence 3788999999999999999975321 112236899999999999999999999999999999998765321 2236788
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce---eeeeccccccccccccccceecccCcccceeeeec-CcceEEe
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK---LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIY 153 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~ 153 (197)
..|.+++|+|++++|++++.|+.|++||+.++.. +..+..+. ..|.+++|+|++.+|++++ +..+.+|
T Consensus 106 ~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~--------~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 106 NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT--------QDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC--------SCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC--------CCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999999999999999999999999987643 33333333 3478999999999999766 4588999
Q ss_pred ecchh
Q psy18074 154 NAQAE 158 (197)
Q Consensus 154 ~~~~~ 158 (197)
+....
T Consensus 178 ~~~~~ 182 (345)
T 3fm0_A 178 REEED 182 (345)
T ss_dssp EEETT
T ss_pred EecCC
Confidence 87654
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=1.6e-24 Score=162.86 Aligned_cols=154 Identities=16% Similarity=0.259 Sum_probs=126.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
||.+|++|+.|+.|++||+.+ ......+.+|...|.+++|+|++..|++++.|+.|++||++++.....+ .+...+.
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~~~~v~ 210 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIEN-RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVT 210 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEE
T ss_pred CCCEEEEEcCCCeEEEEECCC-CcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE--EcCCCcE
Confidence 788999999999999999987 5777888999999999999999999999999999999999998876554 3447899
Q ss_pred EEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 82 HTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 82 ~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
+++|+| +++++++++.|+.|++||+.++..+..+.... .....+...|.+++|+|++++|++++ +..+.+|++....
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN-ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccc-cCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 999999 89999999999999999999988776653221 11223445689999999999999776 4588999987543
No 21
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=1.9e-24 Score=163.02 Aligned_cols=156 Identities=15% Similarity=0.203 Sum_probs=132.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.+|++|+.|+.|++||+.. +.....+.+|.+.|.+++|+|++..|++++.|+.|++||+.++.....+ .+|...|.
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~v~ 185 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNF-NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRATVT 185 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTS-CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSSCEE
T ss_pred CCCEEEEEECCCCEEEEeCCC-cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCCcEE
Confidence 688999999999999999986 5667777899999999999999999999999999999999998877666 56889999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccccc----------------ccccccccceecccCcccceeeee
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ----------------ALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----------------~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
+++|+|++++|++++.|+.|++||+.+++.+..+..+... ....+...+.+++|+|++++|+++
T Consensus 186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 265 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG 265 (420)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence 9999999999999999999999999999888877643210 111123567889999999999976
Q ss_pred cC-cceEEeecchhh
Q psy18074 146 RQ-VPRHIYNAQAEH 159 (197)
Q Consensus 146 ~~-~~~~i~~~~~~~ 159 (197)
.. +.+.+|++...+
T Consensus 266 ~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 266 HVSGVITVHNVFSKE 280 (420)
T ss_dssp ETTSCEEEEETTTCC
T ss_pred cCCCeEEEEECCCCc
Confidence 64 578999987654
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-24 Score=158.77 Aligned_cols=149 Identities=15% Similarity=0.244 Sum_probs=116.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCC------CCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCC-c---ccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG-H---SRD 70 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~-~---~~~ 70 (197)
.++.+|++|+.|+.|++||+... ..+...+.+|...|.+++|+|++.+|++++.|+.|++||+... . ++.
T Consensus 68 p~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 68 PHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp TTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 36889999999999999998531 2345667899999999999999999999999999999999533 2 222
Q ss_pred eeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCC--ceeeeeccccccccccccccceecccCcc--cceeeeec
Q psy18074 71 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGYVNNKQRQALDYSESLKQKYAHHPQ--IRRIARHR 146 (197)
Q Consensus 71 ~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~ 146 (197)
. ..+|...|.+++|+|++++|++++.|+.|++||..++ +++..+.+|.. .|.+++|+|+ +.+|++++
T Consensus 148 ~-~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--------~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 148 V-LQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--------TVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp E-ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--------CEEEEEECCSSSSCEEEEEE
T ss_pred E-eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--------cEEEEEecCCCCeeEEEEEe
Confidence 2 3578889999999999999999999999999998766 45555655544 4789999998 66777655
Q ss_pred -CcceEEeecchh
Q psy18074 147 -QVPRHIYNAQAE 158 (197)
Q Consensus 147 -~~~~~i~~~~~~ 158 (197)
+..+.+|+....
T Consensus 219 ~D~~v~iw~~~~~ 231 (330)
T 2hes_X 219 DDSTVRVWKYMGD 231 (330)
T ss_dssp TTSCEEEEEEEEE
T ss_pred CCCeEEEEEecCC
Confidence 558999998653
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=3.5e-24 Score=156.80 Aligned_cols=145 Identities=14% Similarity=0.197 Sum_probs=127.0
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCC------CCEEEEEeCCCcEEEEECCCCcccceeecc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT------GREFVAGGYDKSLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~------~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 75 (197)
++.+|++|+.|+.|++||++ +..+..+.+|...|.++.|+|. +..+++++.|+.|++||+.++.....+ .+
T Consensus 118 ~~~~l~s~s~D~~i~vwd~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~ 194 (319)
T 3frx_A 118 KASMIISGSRDKTIKVWTIK--GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IG 194 (319)
T ss_dssp TSCEEEEEETTSCEEEEETT--SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CC
T ss_pred CCCEEEEEeCCCeEEEEECC--CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cC
Confidence 67899999999999999997 4667788899999999999995 448999999999999999988765554 57
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeec
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNA 155 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~ 155 (197)
|...|.+++|+|++++|++++.||.|++||+.+++.+..+..+. .+.+++|+|++.+++++....+.+|+.
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~v~~~~~sp~~~~la~~~~~~i~v~~~ 265 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD---------EVFSLAFSPNRYWLAAATATGIKVFSL 265 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS---------CEEEEEECSSSSEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC---------cEEEEEEcCCCCEEEEEcCCCcEEEEe
Confidence 88999999999999999999999999999999998887776443 268999999999999988888999987
Q ss_pred chh
Q psy18074 156 QAE 158 (197)
Q Consensus 156 ~~~ 158 (197)
...
T Consensus 266 ~~~ 268 (319)
T 3frx_A 266 DPQ 268 (319)
T ss_dssp TTE
T ss_pred CcC
Confidence 643
No 24
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3e-24 Score=161.53 Aligned_cols=151 Identities=12% Similarity=0.190 Sum_probs=129.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCC------CceeecccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEECCCCcccceee-
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN------SPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYH- 73 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~- 73 (197)
++.+|++|+.|+.|++||+.... .+...+.+|...|.+++|+|++ ..|++++.|+.|++||+.++.....+.
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 68899999999999999998632 5677888999999999999998 699999999999999999988766653
Q ss_pred cccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee-ccccccccccccccceecccCcccceeeee----cCc
Q psy18074 74 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYV-NNKQRQALDYSESLKQKYAHHPQIRRIARH----RQV 148 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~~ 148 (197)
..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..+... .+..++|+|++++++++ .+.
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-------RPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-------SCCEEEECSTTEEEEEEECTTCCE
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-------cceEEEEcCCCcEEEEeccCCCCc
Confidence 567889999999999999999999999999999999888777 444432 25789999999999987 566
Q ss_pred ceEEeecchhh
Q psy18074 149 PRHIYNAQAEH 159 (197)
Q Consensus 149 ~~~i~~~~~~~ 159 (197)
.+.+|+....+
T Consensus 246 ~i~iwd~~~~~ 256 (402)
T 2aq5_A 246 QVALWDTKHLE 256 (402)
T ss_dssp EEEEEETTBCS
T ss_pred eEEEEcCcccc
Confidence 89999987654
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.93 E-value=4e-24 Score=159.99 Aligned_cols=154 Identities=13% Similarity=0.167 Sum_probs=124.1
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeec-----ccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCC-cccceeecc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVH-----KDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQG-HSRDIYHTK 75 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~-~~~~~~~~~ 75 (197)
+..|++|+.|+.|++||+.+ +..+..+ .+|...|.++.|+| ++..|++|+.|+.|++||++.. .....+ .+
T Consensus 170 ~~~l~s~s~D~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~-~~ 247 (380)
T 3iz6_a 170 ETRLITGSGDQTCVLWDVTT-GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY-HG 247 (380)
T ss_dssp SSCEEEECTTSCEEEECTTT-CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE-CC
T ss_pred CCEEEEECCCCcEEEEEcCC-CcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE-CC
Confidence 45799999999999999987 4555544 57889999999987 7899999999999999999854 444443 67
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEee
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYN 154 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~ 154 (197)
|...|.+++|+|++++|++++.|+.|++||++++..+..+..+... .......+.+++|+|+|++|+++.. +.+.+|+
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR-NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS-SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc-cccccCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 8899999999999999999999999999999999888776544321 1111224789999999999997764 5889999
Q ss_pred cchhh
Q psy18074 155 AQAEH 159 (197)
Q Consensus 155 ~~~~~ 159 (197)
....+
T Consensus 327 ~~~~~ 331 (380)
T 3iz6_a 327 TLLAE 331 (380)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 76443
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=5.3e-24 Score=157.22 Aligned_cols=145 Identities=17% Similarity=0.192 Sum_probs=120.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee-ecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-HTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~-~~~~~~~v 80 (197)
++.++++|+.|+.|++||+++ +.....+.+|...|.+++|+|++..|++++.|+.|++||+......... ...|...|
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v 165 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRT-GTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWV 165 (343)
T ss_dssp STTEEEEEETTSEEEEEETTS-SCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCE
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCcee
Confidence 678999999999999999987 5778888999999999999999999999999999999999843322211 23577889
Q ss_pred eEEEEccCC----------CEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cc
Q psy18074 81 THTVWSLDN----------KFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VP 149 (197)
Q Consensus 81 ~~v~~~~~~----------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 149 (197)
.+++|+|++ .++++++.|+.|++||. ..+....+..+.. .|.+++|+|+|++|++++. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~--------~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES--------NVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSS--------CEEEEEECTTSSEEEEEETTCE
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccc--------cceEEEECCCCCEEEEEcCCCe
Confidence 999999987 78999999999999994 4455555554443 4789999999999997764 57
Q ss_pred eEEeecc
Q psy18074 150 RHIYNAQ 156 (197)
Q Consensus 150 ~~i~~~~ 156 (197)
+.+|++.
T Consensus 237 v~iwd~~ 243 (343)
T 2xzm_R 237 LLIWDIL 243 (343)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 8999984
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=2.7e-24 Score=168.31 Aligned_cols=141 Identities=20% Similarity=0.316 Sum_probs=122.2
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.|+.+|++++.|+.|++||.. +..+..+.+|...|.+++|+|++.+|++++.|+.|++||. +++.+..+ .+|...|
T Consensus 436 ~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~-~~h~~~v 511 (577)
T 2ymu_A 436 PDDQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-TGHSSSV 511 (577)
T ss_dssp TTSSEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE-eCCCCCE
Confidence 368899999999999999975 5677888899999999999999999999999999999996 46655555 5788999
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEee
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYN 154 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~ 154 (197)
++++|+|++++|++++.|+.|++||. +++.+..+.+|... |.+++|+|||++|++++ +..+.+|+
T Consensus 512 ~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~--------v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS--------VWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSC--------EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCC--------EEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999996 57777777666543 78999999999999765 45789996
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.1e-24 Score=155.83 Aligned_cols=145 Identities=15% Similarity=0.293 Sum_probs=110.9
Q ss_pred cEEEEEcCCCcEEEEEccCCC-Cceeec-cc-CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCC-------cccceee
Q psy18074 4 FVFTAANEDFNLYSYDIRQLN-SPLNVH-KD-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG-------HSRDIYH 73 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~-~~~~~~-~~-~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~-------~~~~~~~ 73 (197)
.+|++|+.|+.|++||+.... .....+ .. |...|.+++|+|++.+|++++.|+.|++|++... ..... .
T Consensus 25 ~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~-~ 103 (330)
T 2hes_X 25 GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAI-I 103 (330)
T ss_dssp TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEE-E
T ss_pred CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEE-E
Confidence 489999999999999997522 233444 34 8999999999999999999999999999998542 22222 3
Q ss_pred cccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCC----ceeeeeccccccccccccccceecccCcccceeeeec-Cc
Q psy18074 74 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS----EKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QV 148 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~ 148 (197)
.+|...|.+++|+|++++|++++.|+.|++||+... +.+..+..+. ..|.+++|+|++.+|++++ +.
T Consensus 104 ~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~--------~~v~~v~~~p~~~~l~s~s~D~ 175 (330)
T 2hes_X 104 EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS--------QDVKHVIWHPSEALLASSSYDD 175 (330)
T ss_dssp C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS--------SCEEEEEECSSSSEEEEEETTS
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC--------CceEEEEECCCCCEEEEEcCCC
Confidence 578899999999999999999999999999999532 3344444443 3478999999999999776 45
Q ss_pred ceEEeecch
Q psy18074 149 PRHIYNAQA 157 (197)
Q Consensus 149 ~~~i~~~~~ 157 (197)
.+.+|+...
T Consensus 176 ~i~iW~~~~ 184 (330)
T 2hes_X 176 TVRIWKDYD 184 (330)
T ss_dssp CEEEEEEET
T ss_pred eEEEEECCC
Confidence 889998754
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=8.7e-24 Score=153.20 Aligned_cols=148 Identities=13% Similarity=0.225 Sum_probs=119.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCccc-ceeecccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSR-DIYHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~-~~~~~~~~ 77 (197)
++.+|++|+.|++|++||+.... .....+..|...|.+++|+|+ +..|++++.|+.|++||++++... .....+|.
T Consensus 66 ~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 66 FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp GCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred cCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc
Confidence 37899999999999999998632 345667789999999999997 889999999999999999876422 23346788
Q ss_pred cceeEEEEccC-------------CCEEEEEeCCCcEEEEEcCCCc----eeeeeccccccccccccccceecccCccc-
Q psy18074 78 QHVTHTVWSLD-------------NKFVISASDEMNLRVWKAHASE----KLGYVNNKQRQALDYSESLKQKYAHHPQI- 139 (197)
Q Consensus 78 ~~v~~v~~~~~-------------~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~- 139 (197)
..|.+++|+|+ +++|++++.|+.|++||++++. ....+.+|. ..|.+++|+|++
T Consensus 146 ~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~--------~~V~~v~~sp~~~ 217 (297)
T 2pm7_B 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--------DWVRDVAWSPTVL 217 (297)
T ss_dssp SCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--------SCEEEEEECCCCS
T ss_pred CccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC--------CceEEEEECCCCC
Confidence 89999999997 5799999999999999998765 333444443 458999999984
Q ss_pred --ceeeeec-CcceEEeecch
Q psy18074 140 --RRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 140 --~~l~~~~-~~~~~i~~~~~ 157 (197)
.+|++++ +..+.||+...
T Consensus 218 ~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 218 LRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp SSEEEEEEETTSCEEEEEESS
T ss_pred CceEEEEEECCCcEEEEEeCC
Confidence 7888765 55899999865
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=4.1e-24 Score=158.79 Aligned_cols=150 Identities=13% Similarity=0.143 Sum_probs=126.4
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccee-eccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIY-HTKRMQ 78 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~~~~~-~~~~~~ 78 (197)
.++.+|++|+.|+.|++||+.+ +..+..+.+|...|.+++|+|++. .+++++.|+.|++||++++...... ...+..
T Consensus 149 pdg~~l~sgs~dg~v~iwd~~~-~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~ 227 (357)
T 4g56_B 149 SDGTQAVSGGKDFSVKVWDLSQ-KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDT 227 (357)
T ss_dssp SSSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCS
T ss_pred CCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccc
Confidence 3788999999999999999987 577888999999999999999875 7889999999999999988766554 234557
Q ss_pred ceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccc-ceeeeec-CcceEEeec
Q psy18074 79 HVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQI-RRIARHR-QVPRHIYNA 155 (197)
Q Consensus 79 ~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~-~~~~~i~~~ 155 (197)
.+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+..+... |.+++|+|++ ++|++++ +..+.||++
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~--------v~~l~~sp~~~~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN--------ITGLAYSYHSSPFLASISEDCTVAVLDA 299 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC--------EEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee--------EEEEEEcCCCCCEEEEEeCCCEEEEEEC
Confidence 8999999997 567889999999999999999888777766543 7899999987 5677665 568999998
Q ss_pred chhh
Q psy18074 156 QAEH 159 (197)
Q Consensus 156 ~~~~ 159 (197)
...+
T Consensus 300 ~~~~ 303 (357)
T 4g56_B 300 DFSE 303 (357)
T ss_dssp TSCE
T ss_pred CCCc
Confidence 6543
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=8.7e-24 Score=156.07 Aligned_cols=147 Identities=15% Similarity=0.209 Sum_probs=119.2
Q ss_pred CccEEEEEcCCCcEEEEEccCC------CCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 75 (197)
|+.+|++|+.|+.|++||+... +.+...+.+|...|.+++|+|++.++++++.|+.|++||++++.....+ .+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~-~~ 116 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF-VG 116 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE-EC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE-cC
Confidence 7889999999999999998642 2345668899999999999999999999999999999999998876665 56
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccc----------ceeeee
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQI----------RRIARH 145 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~----------~~l~~~ 145 (197)
|...|.+++|+|++++|++++.|+.|++||+.... ...... ...+...+.+++|+|++ .+++++
T Consensus 117 h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~ 190 (343)
T 2xzm_R 117 HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAE-----KENHSDWVSCVRYSPIMKSANKVQPFAPYFASV 190 (343)
T ss_dssp CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCT-----TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeec-----ccCCCceeeeeeeccccccccccCCCCCEEEEE
Confidence 88999999999999999999999999999997432 222211 01223457899999986 567755
Q ss_pred c-CcceEEeec
Q psy18074 146 R-QVPRHIYNA 155 (197)
Q Consensus 146 ~-~~~~~i~~~ 155 (197)
. +..+.+|+.
T Consensus 191 ~~d~~i~iwd~ 201 (343)
T 2xzm_R 191 GWDGRLKVWNT 201 (343)
T ss_dssp ETTSEEEEEET
T ss_pred cCCCEEEEEcC
Confidence 4 568899984
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=5.2e-24 Score=158.22 Aligned_cols=147 Identities=19% Similarity=0.233 Sum_probs=117.3
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceee--cccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNV--HKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++++++.|+.|++||+++ +++... +..+...+.+++|+|++ ..|++|+.|+.|++||++++.....+ ..|...|
T Consensus 195 ~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~-~~~~~~v 272 (357)
T 4g56_B 195 TIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS-AVHSQNI 272 (357)
T ss_dssp SCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE-CCCSSCE
T ss_pred ceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE-eccceeE
Confidence 5789999999999999986 344433 34567789999999975 67889999999999999998877665 5677899
Q ss_pred eEEEEccCC-CEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCc-ccceeeeec-CcceEEeecch
Q psy18074 81 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHP-QIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 81 ~~v~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~~~~i~~~~~ 157 (197)
++++|+|++ ++|++++.|+.|++||+.+++.+..+ +|. ..|.+++|+| ++.+|++++ ++.+.+|++..
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~--------~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHR--------DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCS--------SCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCC--------CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999999987 57899999999999999988876544 333 3478999998 788888655 56899999876
Q ss_pred hhHH
Q psy18074 158 EHRA 161 (197)
Q Consensus 158 ~~~~ 161 (197)
..+.
T Consensus 344 ~~~~ 347 (357)
T 4g56_B 344 EGRT 347 (357)
T ss_dssp ----
T ss_pred CCcc
Confidence 5444
No 33
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.5e-24 Score=157.08 Aligned_cols=151 Identities=8% Similarity=0.019 Sum_probs=118.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecc-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccc-ceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR-DIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~-~~~~~~~~~~ 79 (197)
++.++++|+.|+.|++||++. +....... .+...+.+++|+|++.+|++|+.||.|++||++++... ..+...|...
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~ 216 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYED-DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK 216 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSS-SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC
T ss_pred CCCEEEEEeCCCcEEEEECCC-CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC
Confidence 678999999999999999986 45554443 44557999999999999999999999999999998876 4443348899
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccc--eecccCcccceeeeec--CcceEEeec
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLK--QKYAHHPQIRRIARHR--QVPRHIYNA 155 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~--~~~~~i~~~ 155 (197)
|.+++|+|++.+|++++ ++.|++||+++++.+..+........ .+ .+++|+|+|++|+++. +..+.+|+.
T Consensus 217 v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEF-----KTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC----------CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccc-----cccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 99999999999999999 55999999998877655543211111 12 3599999999999744 668899988
Q ss_pred chhh
Q psy18074 156 QAEH 159 (197)
Q Consensus 156 ~~~~ 159 (197)
....
T Consensus 291 ~~~~ 294 (343)
T 3lrv_A 291 DKKT 294 (343)
T ss_dssp CTTT
T ss_pred cccc
Confidence 5543
No 34
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.92 E-value=1.8e-23 Score=151.48 Aligned_cols=151 Identities=11% Similarity=0.180 Sum_probs=120.2
Q ss_pred CCccEEEEEcCCCcEEEEEccCC-CCceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCcccc-eeeccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQL-NSPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRD-IYHTKR 76 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~~-~~~~~~ 76 (197)
.+|.+|++|+.|+.|++||+... ..+...+.+|.++|.+++|+|+ +..|++++.|+.|++||+.++.... .....|
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h 98 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVH 98 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCC
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecC
Confidence 37899999999999999999742 3567888999999999999874 8999999999999999999875322 223567
Q ss_pred ccceeEEEEccC--CCEEEEEeCCCcEEEEEcCCCce--eeeeccccccccccccccceecccCcc-------------c
Q psy18074 77 MQHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEK--LGYVNNKQRQALDYSESLKQKYAHHPQ-------------I 139 (197)
Q Consensus 77 ~~~v~~v~~~~~--~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~-------------~ 139 (197)
...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+..+ ...|.+++|+|+ +
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h--------~~~v~~~~~~p~~~~~~~~~~~~~~~ 170 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH--------AIGVNSASWAPATIEEDGEHNGTKES 170 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC--------SSCEEEEEECCCC------------C
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc--------cCccceEeecCCcccccccCCCCCCc
Confidence 789999999997 89999999999999999986532 2223333 334789999996 4
Q ss_pred ceeeeec-CcceEEeecchhh
Q psy18074 140 RRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 140 ~~l~~~~-~~~~~i~~~~~~~ 159 (197)
++|++++ +..+.+|+....+
T Consensus 171 ~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 171 RKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp CEEEEEETTSCEEEEEEETTT
T ss_pred ceEEEEcCCCcEEEEEEcCCC
Confidence 6777655 5589999986543
No 35
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=155.22 Aligned_cols=147 Identities=7% Similarity=-0.024 Sum_probs=120.1
Q ss_pred EEEEcCCCcEEEEEccCC--------CCceeec-ccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEECCCCcccceeec
Q psy18074 6 FTAANEDFNLYSYDIRQL--------NSPLNVH-KDMTSAVTSVDYSP--TGREFVAGGYDKSLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 6 l~~~~~d~~i~i~d~~~~--------~~~~~~~-~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 74 (197)
+++++.|+.|++|+.... ...+..+ ..|.+.|.+++|+| ++.++++++.|+.|++||++++........
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~ 167 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA 167 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec
Confidence 789999999999976521 2223333 35668899999999 999999999999999999999887655544
Q ss_pred ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee-eeecc-ccccccccccccceecccCcccceeeeecCcceEE
Q psy18074 75 KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GYVNN-KQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHI 152 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i 152 (197)
.+...+.+++|+|++.++++|+.||.|++||+++++.+ ..+.. |. ..|.+++|+|++.+|+++.++.+.+
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~--------~~v~~l~fs~~g~~l~s~~~~~v~i 239 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEE--------AKIKEVKFADNGYWMVVECDQTVVC 239 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTT--------SCEEEEEECTTSSEEEEEESSBEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCC--------CCEEEEEEeCCCCEEEEEeCCeEEE
Confidence 55567999999999999999999999999999998876 55655 33 3479999999999999888889999
Q ss_pred eecchhhH
Q psy18074 153 YNAQAEHR 160 (197)
Q Consensus 153 ~~~~~~~~ 160 (197)
|+++..+.
T Consensus 240 wd~~~~~~ 247 (343)
T 3lrv_A 240 FDLRKDVG 247 (343)
T ss_dssp EETTSSTT
T ss_pred EEcCCCCc
Confidence 99977644
No 36
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-24 Score=167.30 Aligned_cols=146 Identities=12% Similarity=0.036 Sum_probs=121.9
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEE--EECCCC-CEEEEEeCCCcEEEEECCCCcccceeecccc--
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSV--DYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYHTKRM-- 77 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~--~~sp~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-- 77 (197)
+..|++|+.||+|++||+++...+...+.+|...|.++ .|+|++ ..|++++.|++|++||++++.+...+ .+|.
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-~~~~~~ 355 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-VSRFRG 355 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-EEECSC
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-cccccc
Confidence 35799999999999999986445566788999999999 578888 89999999999999999988776554 2333
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEeecc
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~ 156 (197)
..|.+++|+|+++.+++++.|+.|++||++++..+..+.+|.. .|.+++|+|+|.+|++++. +.+.+|+..
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~--------~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET--------TITAIGVSRLHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS--------CEEEEECCSSCCBCEEEETTTEEECCBSC
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC--------ceEEEEeCCCCCeEEEEECCCEEEEEech
Confidence 2478999999999999999999999999999887766665554 4789999999999997764 488999975
Q ss_pred h
Q psy18074 157 A 157 (197)
Q Consensus 157 ~ 157 (197)
.
T Consensus 428 ~ 428 (524)
T 2j04_B 428 R 428 (524)
T ss_dssp S
T ss_pred H
Confidence 4
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=6.3e-24 Score=167.85 Aligned_cols=146 Identities=16% Similarity=0.153 Sum_probs=117.2
Q ss_pred CCccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC-Ccccce-eecccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-GHSRDI-YHTKRM 77 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~-~~~~~~-~~~~~~ 77 (197)
.||.+|++|+.|+.|++||+.... ..... .+|...|.+++|+|+|.+|++++.|+.|++|++.+ ++.... ....|.
T Consensus 458 pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~ 536 (611)
T 1nr0_A 458 NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT 536 (611)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS
T ss_pred CCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc
Confidence 378999999999999999997521 11233 67899999999999999999999999999999987 554443 223488
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce-e-eeeccccccccccccccceecccCcccceee-eecCcceEEee
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK-L-GYVNNKQRQALDYSESLKQKYAHHPQIRRIA-RHRQVPRHIYN 154 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~~~~~i~~ 154 (197)
..|.+++|+|+|++|++++.|+.|++||+.++.. . ..+.+|. ...|.+++|+|+++ |+ ++.+..+.+|+
T Consensus 537 ~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~-------~~~v~~v~fs~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 537 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA-------MSSVNSVIWLNETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSST-------TSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred cceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCc-------ccCeeEEEEcCCCE-EEEecCCCCEEEEe
Confidence 9999999999999999999999999999987653 2 3333331 23478999999999 55 45566899998
Q ss_pred c
Q psy18074 155 A 155 (197)
Q Consensus 155 ~ 155 (197)
+
T Consensus 609 ~ 609 (611)
T 1nr0_A 609 V 609 (611)
T ss_dssp C
T ss_pred c
Confidence 6
No 38
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=1.7e-23 Score=157.23 Aligned_cols=147 Identities=14% Similarity=0.259 Sum_probs=118.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeec-------ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccc-----
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR----- 69 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~----- 69 (197)
++.+|++|+.|+.|++||+++ +..+..+ .+|...|.+++|+|++..|++++.|+.|++||+.+....
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 688999999999999999986 4444444 578899999999999999999999999999999764321
Q ss_pred ------ceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccC------c
Q psy18074 70 ------DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHH------P 137 (197)
Q Consensus 70 ------~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s------~ 137 (197)
.....+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|... |.+++|+ |
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~--------v~~v~~~~~~~~~p 368 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS--------VISVAVANGSSLGP 368 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSC--------EEEEEECSSCTTCT
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCC--------EEEEEecCCcCcCC
Confidence 1123568889999999999999999999999999999999988888776654 5667665 4
Q ss_pred ccceeeeec-CcceEEeecch
Q psy18074 138 QIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 138 ~~~~l~~~~-~~~~~i~~~~~ 157 (197)
++.+|++++ ++.+.||+...
T Consensus 369 ~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 369 EYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp TCEEEEEEETTSEEEEEEEEE
T ss_pred CCCEEEEECCCCcEEECcccc
Confidence 788888766 45889999764
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=7.5e-24 Score=161.08 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=121.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccee--eccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~~~~~--~~~~~~ 78 (197)
++.+|++|+.||.|++||++ +..+..+.+|...|.+++|+|++. .+++++.|+.|++||++++.....+ ..+|..
T Consensus 220 ~~~~l~~g~~dg~i~~wd~~--~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~ 297 (435)
T 4e54_B 220 SSRMVVTGDNVGNVILLNMD--GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH 297 (435)
T ss_dssp TTTEEEEECSSSBEEEEESS--SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS
T ss_pred CCCEEEEEeCCCcEeeeccC--cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc
Confidence 68899999999999999997 456778889999999999999876 6778999999999999887654333 356888
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccc---------------------------------------
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQ--------------------------------------- 119 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------------------------------- 119 (197)
.|++++|+|+|++|++++.||.|++||+.++.....+..+.
T Consensus 298 ~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 377 (435)
T 4e54_B 298 PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYEL 377 (435)
T ss_dssp CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCC
T ss_pred cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCC
Confidence 99999999999999999999999999998765433221110
Q ss_pred ----------ccc----cccccccceec-ccCcccceeeeecCcceEEeecchhh
Q psy18074 120 ----------RQA----LDYSESLKQKY-AHHPQIRRIARHRQVPRHIYNAQAEH 159 (197)
Q Consensus 120 ----------~~~----~~~~~~~v~~~-~~s~~~~~l~~~~~~~~~i~~~~~~~ 159 (197)
... ...+...|.++ +|+|+|++|+++.++.+.||++...+
T Consensus 378 ~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk 432 (435)
T 4e54_B 378 RTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEAR 432 (435)
T ss_dssp CCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC---
T ss_pred CEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCe
Confidence 000 11223345565 69999999999998899999987654
No 40
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=1.2e-23 Score=168.42 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=128.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee--eccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQ 78 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~--~~~~~~ 78 (197)
.++.+|++|+.|+.|++||+.+ +.....+.+|...|.+++|+|++..|++++.|+.|++||+......... ..+|..
T Consensus 440 ~~g~~l~sgs~Dg~v~vwd~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~ 518 (694)
T 3dm0_A 440 SDGQFALSGSWDGELRLWDLAA-GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRD 518 (694)
T ss_dssp TTSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSS
T ss_pred CCCCEEEEEeCCCcEEEEECCC-CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCC
Confidence 3788999999999999999987 5777888999999999999999999999999999999998754332222 246778
Q ss_pred ceeEEEEccCC--CEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeec
Q psy18074 79 HVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNA 155 (197)
Q Consensus 79 ~v~~v~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~ 155 (197)
.|.+++|+|++ ..+++++.|+.|++||+.+++....+.+|... |.+++|+|++++|++++ ++.+.+|++
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~--------v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY--------VSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC--------EEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC--------EEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 89999999986 57999999999999999998887777666543 78999999999999766 458999998
Q ss_pred chhhH
Q psy18074 156 QAEHR 160 (197)
Q Consensus 156 ~~~~~ 160 (197)
...+.
T Consensus 591 ~~~~~ 595 (694)
T 3dm0_A 591 AEGKK 595 (694)
T ss_dssp TTTEE
T ss_pred CCCce
Confidence 76543
No 41
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=1e-23 Score=153.33 Aligned_cols=144 Identities=8% Similarity=0.004 Sum_probs=111.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCC---CCeEEEEECCCCCEE------------EEEeCCCcEEEEECCCC
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT---SAVTSVDYSPTGREF------------VAGGYDKSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l------------~~~~~d~~v~i~d~~~~ 66 (197)
++.+|++|+.|++|++||+.+ ++.+..+.+|. ..+.+++|+|+|..+ ++|+.|+++++||..++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~T-Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKT-GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp STTEEEEEETTSEEEEEETTT-CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCceEEEecCCCcEEEEECCC-CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 468899999999999999998 67788887654 357778999999876 56788999999999999
Q ss_pred ccccee----ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccccee
Q psy18074 67 HSRDIY----HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 67 ~~~~~~----~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 142 (197)
..+..+ ..+|...+.+.++ ++.++++++.|++|+|||+.+++.+.++.++.... +..++|||||++|
T Consensus 271 k~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~v-------vs~vafSPDG~~L 341 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQH-------WSFVKWSGTDSHL 341 (356)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CC-------CCEEEECSSSSEE
T ss_pred EEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCe-------EEEEEECCCCCEE
Confidence 876543 2355544444444 48899999999999999999999999988776532 2468999999999
Q ss_pred eeecCc-ceEEeec
Q psy18074 143 ARHRQV-PRHIYNA 155 (197)
Q Consensus 143 ~~~~~~-~~~i~~~ 155 (197)
++++.+ .+.||+.
T Consensus 342 aSGS~D~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKDGNIFVYHY 355 (356)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEECCCcEEEecC
Confidence 987755 8999985
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=6.9e-23 Score=150.25 Aligned_cols=153 Identities=10% Similarity=0.119 Sum_probs=122.9
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeE
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH 82 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~ 82 (197)
..++++++.|+.|++||++. ......+.+|.+.|.+++|+|++.+|++++.|+.|++||+.+...+..+. +...+.+
T Consensus 185 ~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~v~~ 261 (340)
T 4aow_A 185 NPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINA 261 (340)
T ss_dssp SCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CSSCEEE
T ss_pred CcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--CCceEEe
Confidence 45788999999999999987 57788888999999999999999999999999999999999988776653 3478999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc-cccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 83 TVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR-QALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 83 v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
++|+|++.++ +++.|+.|++||+.++..+..+..... .....+...|.+++|+|+|++|++++ ++.+.||++....
T Consensus 262 ~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 262 LCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999987655 556699999999998887766654322 12234456689999999999999766 4589999987654
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=3.1e-24 Score=159.88 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=115.3
Q ss_pred CCccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCc---ccceeeccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH---SRDIYHTKR 76 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~---~~~~~~~~~ 76 (197)
.++.+|++|+.|+.|++||+.... .....+.+|...|.+++|+|++.+|++++.|+.|++||+.++. .... ...|
T Consensus 21 ~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-~~~~ 99 (377)
T 3dwl_C 21 SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLV-LLRL 99 (377)
T ss_dssp SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEE-CCCC
T ss_pred CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeE-eccc
Confidence 378899999999999999998632 5677888999999999999999999999999999999999876 2222 3567
Q ss_pred ccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce---eeeeccccccccccccccceecccCcccceeeeecC-cceEE
Q psy18074 77 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK---LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHI 152 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i 152 (197)
...|.+++|+|++++|++++.|+.|++||+.+++. ...+... +...|.+++|+|++++|+++.. ..+.+
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP-------LRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS-------CCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc-------cCCCeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 88999999999999999999999999999998763 4444441 2234789999999999997664 57899
Q ss_pred eecc
Q psy18074 153 YNAQ 156 (197)
Q Consensus 153 ~~~~ 156 (197)
|++.
T Consensus 173 wd~~ 176 (377)
T 3dwl_C 173 LSAY 176 (377)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9985
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=3.8e-24 Score=159.40 Aligned_cols=146 Identities=15% Similarity=0.073 Sum_probs=118.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC--ceeeccc-CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC-------------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS--PLNVHKD-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ------------- 65 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~------------- 65 (197)
++.+|++|+.|+.|++||++.... ....+.. |...|.+++|+|++.+|++++.|+.|++||+..
T Consensus 111 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 190 (377)
T 3dwl_C 111 NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWG 190 (377)
T ss_dssp TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSC
T ss_pred CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccc
Confidence 678999999999999999986321 4566766 999999999999999999999999999999863
Q ss_pred -----CcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce----eeeeccccccccccccccceecccC
Q psy18074 66 -----GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK----LGYVNNKQRQALDYSESLKQKYAHH 136 (197)
Q Consensus 66 -----~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s 136 (197)
+.+...+ .|...|.+++|+|++++|++++.|+.|++||+.+++. +..+..+. ..+.+++|+
T Consensus 191 ~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------~~v~~~~~s 260 (377)
T 3dwl_C 191 SRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ--------LPLRSLLWA 260 (377)
T ss_dssp SCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS--------SCEEEEEEE
T ss_pred cccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC--------CceEEEEEc
Confidence 2232333 7788999999999999999999999999999998876 44554443 347899999
Q ss_pred cccceeeeecCcceEEeecch
Q psy18074 137 PQIRRIARHRQVPRHIYNAQA 157 (197)
Q Consensus 137 ~~~~~l~~~~~~~~~i~~~~~ 157 (197)
|++++|+++.++...+|+...
T Consensus 261 ~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 261 NESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp ETTEEEEEESSSSEEEECCCC
T ss_pred CCCCEEEEEcCCcEEEEEeCC
Confidence 999999999988888888764
No 45
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.9e-24 Score=165.88 Aligned_cols=171 Identities=10% Similarity=0.002 Sum_probs=127.5
Q ss_pred ccEEEEEcCCCcEEEEEccCCC----------CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLN----------SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~----------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
+.+||+|+.|++|++||+.... .+...+.+|...|++++|+|+ ..|++|+.||.|++||++++......
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~ 303 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFY 303 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEE
Confidence 5799999999999999997532 123467789999999999985 48999999999999999987544333
Q ss_pred ecccccceeEE--EEccCC-CEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-c
Q psy18074 73 HTKRMQHVTHT--VWSLDN-KFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-V 148 (197)
Q Consensus 73 ~~~~~~~v~~v--~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 148 (197)
...|...|.++ +|+|++ ++|++++.|++|++||+++++....+.++... ..+.+++|+|+++.++++.. .
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~------~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG------SNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC------CSCCCEEEETTTTEEEEECSSS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc------CcccceEeCCCcCeEEEeCCCC
Confidence 46788999999 578888 89999999999999999988776665544321 12578999999988886654 4
Q ss_pred ceEEeecchhhHHHHhHhHhhhhhhhcCCCCC
Q psy18074 149 PRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180 (197)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (197)
.+.+|+.+..........+........+++.+
T Consensus 378 tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 378 SLRAVPSRAAFAVHPLVSRETTITAIGVSRLH 409 (524)
T ss_dssp EEEEEETTCTTCCEEEEECSSCEEEEECCSSC
T ss_pred cEEEEECcccccceeeecCCCceEEEEeCCCC
Confidence 79999987654322222233334444555444
No 46
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.91 E-value=1.4e-23 Score=156.42 Aligned_cols=149 Identities=11% Similarity=0.100 Sum_probs=117.1
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCce-eecccCCCCeEEEEECCCCCEEEEEeCCC----cEEEEECCCCcccce---e
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQGHSRDI---Y 72 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~v~i~d~~~~~~~~~---~ 72 (197)
.||.++++++.+ .+.+|+..+..... .....|...|.+++|+|++..+++++.++ .+++|++........ .
T Consensus 186 pdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 186 TDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp TTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee
Confidence 478999999855 56677766533222 33456788899999999999999998777 688898876643221 1
Q ss_pred ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee-ccccccccccccccceecccCcccceeeeecC-cce
Q psy18074 73 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYV-NNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPR 150 (197)
Q Consensus 73 ~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~ 150 (197)
..+|...|++++|+|+|++||+|+.|+.|+|||+.+++.+..+ .+|.. .|++++|+|||++||+++. ..+
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~--------~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF--------AITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS--------CEEEEEECTTSCEEEEEETTSEE
T ss_pred ecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC--------CEEEEEECCCCCEEEEEeCCCeE
Confidence 3567789999999999999999999999999999999988765 34443 4799999999999998765 589
Q ss_pred EEeecchh
Q psy18074 151 HIYNAQAE 158 (197)
Q Consensus 151 ~i~~~~~~ 158 (197)
.||++...
T Consensus 337 rvw~ip~~ 344 (365)
T 4h5i_A 337 HIIKLPLN 344 (365)
T ss_dssp EEEECCTT
T ss_pred EEEEcCCC
Confidence 99998543
No 47
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=4.9e-23 Score=150.82 Aligned_cols=158 Identities=13% Similarity=0.119 Sum_probs=120.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCC--------CceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCcccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN--------SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRDI 71 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~~~ 71 (197)
|+.+|++|+.|+.|++||+.... .+...+..|...|.+++|+|+ +..|++++.|+.|++||++++.....
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 149 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 149 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTC
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcc
Confidence 58899999999999999998632 346677889999999999999 99999999999999999876542211
Q ss_pred -----------------------------------------------------------eecccccceeEEEEccCC---
Q psy18074 72 -----------------------------------------------------------YHTKRMQHVTHTVWSLDN--- 89 (197)
Q Consensus 72 -----------------------------------------------------------~~~~~~~~v~~v~~~~~~--- 89 (197)
...+|...|.+++|+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 150 WTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp CEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred ccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCc
Confidence 123477889999999998
Q ss_pred -CEEEEEeCCCcEEEEEcCCCceeeeec--------------------------------------cccccccccccccc
Q psy18074 90 -KFVISASDEMNLRVWKAHASEKLGYVN--------------------------------------NKQRQALDYSESLK 130 (197)
Q Consensus 90 -~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~v 130 (197)
++|++++.||.|++||+.++....... ......+..+...|
T Consensus 230 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp SEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred ceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 899999999999999998642111000 00011122344568
Q ss_pred eecccCcccceeeeec-CcceEEeecchhh
Q psy18074 131 QKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 131 ~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.+++|+|++++|++++ ++.+.+|+....+
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 9999999999999766 5589999987543
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=4.3e-23 Score=154.53 Aligned_cols=154 Identities=13% Similarity=0.168 Sum_probs=127.0
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeeccc---C---CCCeEEEEECCCCCEEEEEeCC---CcEEEEECCCCccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKD---M---TSAVTSVDYSPTGREFVAGGYD---KSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~---~~~v~~~~~sp~~~~l~~~~~d---~~v~i~d~~~~~~~~~~ 72 (197)
++ ++++++.|+.|++||++. ..++..+.. | ...+.+++|+|++..|++++.| +.|++||+.++..+..+
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred Cc-eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 56 899999999999999987 577778887 8 9999999999999999999999 99999999998876665
Q ss_pred ecc-------------cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeec------ccc-------ccccccc
Q psy18074 73 HTK-------------RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVN------NKQ-------RQALDYS 126 (197)
Q Consensus 73 ~~~-------------~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~~~-------~~~~~~~ 126 (197)
.. |...|.+++|+|++++|++++.||.|++||+.+++.+..+. .+. ......+
T Consensus 275 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 275 -SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp -CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred -ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc
Confidence 33 77899999999999999999999999999999999888877 330 0001112
Q ss_pred cccceecccCccc----------ceeeeec-CcceEEeecchh
Q psy18074 127 ESLKQKYAHHPQI----------RRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 127 ~~~v~~~~~s~~~----------~~l~~~~-~~~~~i~~~~~~ 158 (197)
...|.+++|+|++ ++|+++. ++.+.+|++...
T Consensus 354 ~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 354 EPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp SCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 4568999999998 6777655 568899998653
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2e-23 Score=158.51 Aligned_cols=158 Identities=12% Similarity=0.077 Sum_probs=129.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeeccc--CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++.+|++|+.|+.|++||++. ..++..+.. |.+.|.+++|+|++..|++++.||.|++||++++..+..+...|...
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAP 259 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEE
T ss_pred CCCEEEEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCc
Confidence 588999999999999999987 577777877 78999999999999999999999999999999988877664466678
Q ss_pred eeEEEEc----cCCCEEEEEeCCCcEEEEEcCCCceeeeecccccccc----------------cc--ccccceecccCc
Q psy18074 80 VTHTVWS----LDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQAL----------------DY--SESLKQKYAHHP 137 (197)
Q Consensus 80 v~~v~~~----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------------~~--~~~~v~~~~~s~ 137 (197)
|.+++|+ |++.+|++++.||.|++||+.+++.+..+..+..... .. +...|.+++|+
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 9999665 4678999999999999999999998887775542211 11 45568899999
Q ss_pred ccceeeeec-CcceEEeecchhhHH
Q psy18074 138 QIRRIARHR-QVPRHIYNAQAEHRA 161 (197)
Q Consensus 138 ~~~~l~~~~-~~~~~i~~~~~~~~~ 161 (197)
++.+|++++ ++.+.+|++...+..
T Consensus 339 ~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 339 NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred CceEEEecCCCCeEEEEECCCcccc
Confidence 667777665 668999998766543
No 50
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=4.9e-23 Score=154.95 Aligned_cols=146 Identities=10% Similarity=0.118 Sum_probs=120.6
Q ss_pred EEEEEcCCCcEEEEEccCCC---CceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCc-------ccceee
Q psy18074 5 VFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGH-------SRDIYH 73 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~-------~~~~~~ 73 (197)
++++++.||.|++|++...+ .....+.+|.+.|.+++|+| ++..|++++.||.|++||+.++. ....+
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~- 127 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL- 127 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE-
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe-
Confidence 34457889999999996532 34556788999999999999 89999999999999999999873 33333
Q ss_pred cccccceeEEEEccCC-CEEEEEeCCCcEEEEEcCCCceeeee--ccccccccccccccceecccCcccceeeeec-Ccc
Q psy18074 74 TKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGYV--NNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVP 149 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~ 149 (197)
.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+ ..+.. .+.+++|+|++.+|+++. ++.
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD--------TIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS--------CEEEEEECTTSSCEEEEETTSE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC--------ceEEEEECCCCCEEEEEecCCc
Confidence 5688999999999998 69999999999999999999888777 44443 378999999999998765 558
Q ss_pred eEEeecchhh
Q psy18074 150 RHIYNAQAEH 159 (197)
Q Consensus 150 ~~i~~~~~~~ 159 (197)
+.+|+....+
T Consensus 200 i~iwd~~~~~ 209 (402)
T 2aq5_A 200 VRVIEPRKGT 209 (402)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeCCCCc
Confidence 8999987644
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-22 Score=149.78 Aligned_cols=151 Identities=14% Similarity=0.114 Sum_probs=131.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++++.|+.|++||++........+..|...|.+++|+|++..|++++.|+.|++||+.++.....+. +...+.
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~ 263 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLN 263 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CCCCce
Confidence 578999999999999999986456778888899999999999999999999999999999999988777763 557899
Q ss_pred EEEEccCCCEEEEEeCCC--------------cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-
Q psy18074 82 HTVWSLDNKFVISASDEM--------------NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR- 146 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 146 (197)
+++|+|+++++++++.++ .+++||+.+++.+..+..+... |.+++|+|++++|+++.
T Consensus 264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 264 TAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGP--------LNTVAISPQGTSYASGGE 335 (369)
T ss_dssp EEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSC--------EEEEEECTTSSEEEEEET
T ss_pred eEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCc--------EEEEEECCCCCEEEEEcC
Confidence 999999999999998888 8999999999888877766543 78999999999999766
Q ss_pred CcceEEeecchhhHHH
Q psy18074 147 QVPRHIYNAQAEHRAI 162 (197)
Q Consensus 147 ~~~~~i~~~~~~~~~~ 162 (197)
++.+.+|++.......
T Consensus 336 dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 336 DGFIRLHHFEKSYFDF 351 (369)
T ss_dssp TSEEEEEEECHHHHTC
T ss_pred CCeEEEEECccccchh
Confidence 5588999998765433
No 52
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.6e-23 Score=154.86 Aligned_cols=112 Identities=14% Similarity=0.279 Sum_probs=97.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCce-eecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+|.+|++|+.|+.|++||+...+... ..+.+|...|.+++|+|++.+|++++.|+.|++||+.++..... ..|...|
T Consensus 53 ~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~v 130 (368)
T 3mmy_A 53 PGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI--AQHDAPV 130 (368)
T ss_dssp SSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCE
T ss_pred CceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee--ccccCce
Confidence 37999999999999999998633333 67888999999999999999999999999999999999886654 4677899
Q ss_pred eEEEE--ccCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy18074 81 THTVW--SLDNKFVISASDEMNLRVWKAHASEKLGYV 115 (197)
Q Consensus 81 ~~v~~--~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 115 (197)
.+++| +|+++++++++.|+.|++||+.+++.+..+
T Consensus 131 ~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp EEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE
T ss_pred EEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE
Confidence 99999 899999999999999999999877654433
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=2.7e-23 Score=158.01 Aligned_cols=149 Identities=10% Similarity=0.101 Sum_probs=116.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCccccee-eccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIY-HTKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~-~~~~~~ 78 (197)
++++||+|+.||.|++||+.... .....+.+|.+.|++++|+| ++.+|++++.|+.|++||++++...... ...+..
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 210 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINI 210 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSC
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCc
Confidence 56799999999999999997533 23445678999999999998 6889999999999999999876543332 122335
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc-eeeeec-CcceEEeecc
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR-RIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~~~~~i~~~~ 156 (197)
.+.+++|+|++++|++|+.||.|++||+.. +.+..+..+. ..|.+++|+|++. ++++++ +..+.||++.
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~--------~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK--------KKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS--------SCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc--------ceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 678999999999999999999999999864 4444454443 3478999999876 565554 5689999987
Q ss_pred hhh
Q psy18074 157 AEH 159 (197)
Q Consensus 157 ~~~ 159 (197)
..+
T Consensus 282 ~~~ 284 (435)
T 4e54_B 282 QVR 284 (435)
T ss_dssp TCC
T ss_pred ccc
Confidence 554
No 54
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=3e-23 Score=151.63 Aligned_cols=148 Identities=12% Similarity=0.175 Sum_probs=117.0
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEECCCCcccce-eecccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRLYLAHQGHSRDI-YHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i~d~~~~~~~~~-~~~~~~ 77 (197)
+|.+|++|+.|+.|++||+.... ..+..+.+|.+.|.+++|+| ++..|++++.|+.|++||+.++..... ...+|.
T Consensus 24 ~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~ 103 (316)
T 3bg1_A 24 YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD 103 (316)
T ss_dssp GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC
Confidence 68999999999999999998632 24567889999999999986 489999999999999999998753222 235688
Q ss_pred cceeEEEEccC--CCEEEEEeCCCcEEEEEcCCCcee---eeeccccccccccccccceecccCcc--------------
Q psy18074 78 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKL---GYVNNKQRQALDYSESLKQKYAHHPQ-------------- 138 (197)
Q Consensus 78 ~~v~~v~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~-------------- 138 (197)
..|.+++|+|+ +.+|++++.|+.|++||+..+... ..+.. +...+.+++|+|+
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA--------HTIGCNAVSWAPAVVPGSLIDHPSGQK 175 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS--------SSSCBCCCEECCCCCC------CCSCC
T ss_pred CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc--------ccCCcceEEEccccCCccccccccccC
Confidence 89999999998 789999999999999999865321 22222 2334678899987
Q ss_pred ---cceeeeec-CcceEEeecch
Q psy18074 139 ---IRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 139 ---~~~l~~~~-~~~~~i~~~~~ 157 (197)
+++|++++ +..+.+|+...
T Consensus 176 ~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 176 PNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp CCCCCBEECCBTTSBCCEEEECT
T ss_pred ccccceEEEecCCCeEEEEEeCC
Confidence 46777665 55889999853
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=1.6e-22 Score=150.01 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=124.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC---ceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC--------------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-------------- 64 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~-------------- 64 (197)
++.+|++++.|+.|++||+..... .......|...|.+++|+|++..|++++.|+.|++||+.
T Consensus 107 ~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 186 (372)
T 1k8k_C 107 NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 186 (372)
T ss_dssp TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB
T ss_pred CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccc
Confidence 688999999999999999986321 223336788999999999999999999999999999964
Q ss_pred ----CCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc
Q psy18074 65 ----QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR 140 (197)
Q Consensus 65 ----~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 140 (197)
.+.....+ ..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+.. .+.+++|+|++.
T Consensus 187 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~v~~~~~~~~~~ 257 (372)
T 1k8k_C 187 SKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL--------PLLAVTFITESS 257 (372)
T ss_dssp SCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC--------CEEEEEEEETTE
T ss_pred cccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCC--------CeEEEEEecCCC
Confidence 34444443 46778999999999999999999999999999999988887766543 378999999999
Q ss_pred eeeeecCcceEEeecch
Q psy18074 141 RIARHRQVPRHIYNAQA 157 (197)
Q Consensus 141 ~l~~~~~~~~~i~~~~~ 157 (197)
+++++.++.+.+|+...
T Consensus 258 ~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 258 LVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEETTSSCEEEEEET
T ss_pred EEEEEeCCeEEEEEccC
Confidence 99999888999999977
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.90 E-value=2.2e-22 Score=151.80 Aligned_cols=150 Identities=12% Similarity=0.145 Sum_probs=123.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec--ccc--
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT--KRM-- 77 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~--~~~-- 77 (197)
++.+|++|+.|+.|++||+.. +..+..+.+|...|.+++|+|++..|++++.|+.|++||++++.....+.. .+.
T Consensus 150 ~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~ 228 (420)
T 3vl1_A 150 SGEALISSSQDMQLKIWSVKD-GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDG 228 (420)
T ss_dssp TSSEEEEEETTSEEEEEETTT-CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCC
T ss_pred CCCEEEEEeCCCeEEEEeCCC-CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCC
Confidence 678999999999999999987 567788889999999999999999999999999999999999887666522 232
Q ss_pred -------------------cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcc
Q psy18074 78 -------------------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQ 138 (197)
Q Consensus 78 -------------------~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 138 (197)
..+.+++|+|+++++++++.||.|++||+++++.+..+..... ..+.+++|+|+
T Consensus 229 v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-------~~v~~~~~~~~ 301 (420)
T 3vl1_A 229 VNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT-------CSCNSLTVDGN 301 (420)
T ss_dssp EEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS-------SCEEEEEECSS
T ss_pred ccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC-------CCceeEEEeCC
Confidence 3444555688999999999999999999999887766644322 34789999999
Q ss_pred cc-eeeeec-CcceEEeecchhh
Q psy18074 139 IR-RIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 139 ~~-~l~~~~-~~~~~i~~~~~~~ 159 (197)
+. +|+++. ++.+.+|++...+
T Consensus 302 ~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 302 NANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp CTTEEEEEETTSEEEEEETTCTT
T ss_pred CCCEEEEEeCCCeEEEEEcCCCc
Confidence 98 777665 4588999987654
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.3e-22 Score=147.15 Aligned_cols=145 Identities=12% Similarity=0.137 Sum_probs=125.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeeccc-CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++++.|+.|++||.. .....+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+ ..|...|
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~i 228 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY-EGHESFV 228 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCEEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh-hcCCceE
Confidence 67899999999999999943 45566665 889999999999988 999999999999999998877666 5677899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecchhhH
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHR 160 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~~~ 160 (197)
.+++|+|++ .+++++.||.|++||+.+++.+..+..+... +.+++|+|++++++++.++.+.+|++...+.
T Consensus 229 ~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 229 YCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAIS--------IWSVDCMSNGDIIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSC--------EEEEEECTTSCEEEEETTSCEEEEESCGGGC
T ss_pred EEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCce--------EEEEEEccCCCEEEEeCCCcEEEEeCCCCce
Confidence 999999999 5889999999999999999888877665543 7899999999988888888999999876544
No 58
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=1.5e-22 Score=148.24 Aligned_cols=159 Identities=13% Similarity=0.171 Sum_probs=124.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCCC---CceeecccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEECCCCcc-------
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRLYLAHQGHS------- 68 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i~d~~~~~~------- 68 (197)
.++.+|++|+.|+.|++||+.... .....+.+|...|.+++|+| ++..|++++.|+.|++||+.++..
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~ 100 (351)
T 3f3f_A 21 FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW 100 (351)
T ss_dssp SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE
T ss_pred CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc
Confidence 368899999999999999998532 34566778999999999999 599999999999999999987642
Q ss_pred --cceeecccccceeEEEEccC--CCEEEEEeCCCcEEEEEcCCCceeeeecc---------------------------
Q psy18074 69 --RDIYHTKRMQHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGYVNN--------------------------- 117 (197)
Q Consensus 69 --~~~~~~~~~~~v~~v~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------------- 117 (197)
... ...|...|.+++|+|+ ++++++++.||.|++||+.+++.+..+..
T Consensus 101 ~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 179 (351)
T 3f3f_A 101 NKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSR 179 (351)
T ss_dssp EEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCS
T ss_pred ceeee-ecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCC
Confidence 222 3567889999999999 99999999999999999987654322110
Q ss_pred ----------------------cc---ccccccccccceecccCccc----ceeeeec-CcceEEeecchhhH
Q psy18074 118 ----------------------KQ---RQALDYSESLKQKYAHHPQI----RRIARHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 118 ----------------------~~---~~~~~~~~~~v~~~~~s~~~----~~l~~~~-~~~~~i~~~~~~~~ 160 (197)
.. ...+..+...|.+++|+|++ ++|+++. ++.+.+|++.....
T Consensus 180 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 252 (351)
T 3f3f_A 180 FSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLS 252 (351)
T ss_dssp SSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-
T ss_pred CCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcC
Confidence 00 11223356678999999998 7787665 55899999986533
No 59
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=1.4e-22 Score=158.52 Aligned_cols=143 Identities=19% Similarity=0.296 Sum_probs=122.3
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.|+.+|++++.|+.|++||.. ++.+..+.+|...|.+++|+|++..|++++.|+.|++||.. +..+..+ .+|...|
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~-~~~~~~v 470 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTL-TGHSSSV 470 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEE-cCCCCCE
Confidence 378899999999999999975 56778888999999999999999999999999999999975 4444444 5688899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEeecc
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~ 156 (197)
.+++|+|++++|++++.|+.|++||. +++.+..+.++.. .|.+++|+|++++|+++.. ..+.+|+..
T Consensus 471 ~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~--------~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS--------SVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS--------CEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC--------CEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 99999999999999999999999995 5777777766554 3789999999999997665 578999853
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=4.1e-22 Score=149.32 Aligned_cols=160 Identities=11% Similarity=0.128 Sum_probs=124.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccee--------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIY-------- 72 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~~~~~-------- 72 (197)
++.++++|+.|+.|++||++. +.....+..|.+.|.+++|+|++. .+++++.||.|++||++.+......
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKS-GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSS-SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS
T ss_pred CCcEEEEEcCCCeEEEEeCCC-cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccc
Confidence 456999999999999999987 577788889999999999999998 5889999999999999876521111
Q ss_pred -------ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc---------------------------
Q psy18074 73 -------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK--------------------------- 118 (197)
Q Consensus 73 -------~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--------------------------- 118 (197)
...|...|.+++|+|++++|++++.||.|++||+.+++........
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 1457789999999999999999999999999999876643322110
Q ss_pred ------------cccccccccccceecccCcccceeeeec-CcceEEeecchhhHHH
Q psy18074 119 ------------QRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEHRAI 162 (197)
Q Consensus 119 ------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~~~~ 162 (197)
....+..+...|.+++|+|++++|++++ ++.+.+|+....+...
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 1112234556789999999999999766 5589999998765543
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=5e-22 Score=145.27 Aligned_cols=148 Identities=11% Similarity=0.084 Sum_probs=125.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++++.|+.|++||+.... .....+..|...+.+++|+|++..+++++.|+.|++||+.++.....+ ..|...+
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~-~~~~~~i 186 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGA 186 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCE
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee-ecccCce
Confidence 67899999999999999998632 145667788999999999999999999999999999999998876665 4577899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.+++|+|+++++++++.|+.|++||+.+++.+..+... ..+.+++|+|++++++++. ++.+.+|+....+
T Consensus 187 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT---------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257 (337)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSC
T ss_pred EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC---------CceEEEEECCCCCEEEEEcCCCcEEEEECCCCC
Confidence 99999999999999999999999999998877665432 2368999999999998766 5588999987653
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.9e-22 Score=151.72 Aligned_cols=146 Identities=11% Similarity=0.045 Sum_probs=124.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.+|++++.|+.|++||++. ......+..|...+.+++|+|++ .+++++.|+.|++||+.++..+..+ ..|...+.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~ 334 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS-IVDGVPIF 334 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE-ECTTCCEE
T ss_pred CCCEEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec-ccCCccEE
Confidence 678999999999999999987 57778888899999999999999 9999999999999999998876665 45678999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCc--------------------eeeeeccccccccccccccceecccCcccce
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASE--------------------KLGYVNNKQRQALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~--------------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 141 (197)
+++|+|++++|++++.||.|++||+.++. .+..+..+... ..|.+++|+|++++
T Consensus 335 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN------DYIFDLSWNCAGNK 408 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCC------CCEEEEEECTTSSE
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC------CceEEEEccCCCce
Confidence 99999999999999999999999998877 55555554321 04789999999999
Q ss_pred eeeec-CcceEEeecc
Q psy18074 142 IARHR-QVPRHIYNAQ 156 (197)
Q Consensus 142 l~~~~-~~~~~i~~~~ 156 (197)
|+++. ++.+.+|++.
T Consensus 409 l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 409 ISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEESSSCCEEEECC
T ss_pred EEEEecCceEEEEeec
Confidence 98655 4578999874
No 63
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.90 E-value=2e-22 Score=161.39 Aligned_cols=147 Identities=13% Similarity=0.202 Sum_probs=124.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee---ecccCCCCeEEEEECCCC--CEEEEEeCCCcEEEEECCCCcccceeeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN---VHKDMTSAVTSVDYSPTG--REFVAGGYDKSLRLYLAHQGHSRDIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~sp~~--~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~ 76 (197)
++.+|++|+.|++|++||... ..... ...+|...|.+++|+|++ ..+++++.|+.|++||++++.....+ .+|
T Consensus 483 ~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~-~~h 560 (694)
T 3dm0_A 483 DNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL-AGH 560 (694)
T ss_dssp TSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE-CCC
T ss_pred CCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE-cCC
Confidence 678999999999999999864 22111 124688899999999986 57999999999999999988776655 678
Q ss_pred ccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecc
Q psy18074 77 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQ 156 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~ 156 (197)
...|.+++|+|++++|++++.||.|++||+.+++.+..+..+. .+.+++|+|++.+++++.+..+.||++.
T Consensus 561 ~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~---------~v~~~~~sp~~~~l~~~~~~~i~iwd~~ 631 (694)
T 3dm0_A 561 TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS---------VIHALCFSPNRYWLCAATEHGIKIWDLE 631 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS---------CEEEEEECSSSSEEEEEETTEEEEEETT
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC---------cEEEEEEcCCCcEEEEEcCCCEEEEECC
Confidence 8999999999999999999999999999999998876654332 3689999999999999888899999987
Q ss_pred hhh
Q psy18074 157 AEH 159 (197)
Q Consensus 157 ~~~ 159 (197)
...
T Consensus 632 ~~~ 634 (694)
T 3dm0_A 632 SKS 634 (694)
T ss_dssp TTE
T ss_pred CCC
Confidence 654
No 64
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.90 E-value=3.3e-23 Score=155.70 Aligned_cols=162 Identities=9% Similarity=-0.045 Sum_probs=114.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCC----CceeecccCCCCeEEEEECC--------CCCEEEEEeCCCcEEEEECCCCccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN----SPLNVHKDMTSAVTSVDYSP--------TGREFVAGGYDKSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~sp--------~~~~l~~~~~d~~v~i~d~~~~~~~ 69 (197)
++.++++|+.|++|++||.+... .+...+.+|.+.|.+++|+| +++.|++++.|++|++||+.++...
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 35689999999999999998632 12345789999999999998 7889999999999999999887665
Q ss_pred ceeecccccceeEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeccccc-----------------cccccccccce
Q psy18074 70 DIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGYVNNKQR-----------------QALDYSESLKQ 131 (197)
Q Consensus 70 ~~~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----------------~~~~~~~~~v~ 131 (197)
... ..|...|.+++|+|++. +|++++.|+.|++||+.+++.......... .....+...+.
T Consensus 180 ~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 180 LAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 554 45678999999999874 789999999999999998765443321110 01123344577
Q ss_pred ecccC-cccceeeeecC-cceEEeecchhhHHHHh
Q psy18074 132 KYAHH-PQIRRIARHRQ-VPRHIYNAQAEHRAIRS 164 (197)
Q Consensus 132 ~~~~s-~~~~~l~~~~~-~~~~i~~~~~~~~~~~~ 164 (197)
++.|+ |+++.|+++.. ..+.+|++...+.....
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 88876 79999887665 48899998766554443
No 65
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=3.7e-23 Score=151.12 Aligned_cols=148 Identities=15% Similarity=0.183 Sum_probs=117.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCccc--ceeeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSR--DIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~--~~~~~~~ 76 (197)
++.+|++|+.|++|++||+++.. .....+.+|...|.+++|+|+ +..|++++.|+.|++||+..+... ......|
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSS
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccc
Confidence 47899999999999999998632 345667789999999999998 789999999999999999876321 2223567
Q ss_pred ccceeEEEEccC-----------------CCEEEEEeCCCcEEEEEcCCCc---eeeeeccccccccccccccceecccC
Q psy18074 77 MQHVTHTVWSLD-----------------NKFVISASDEMNLRVWKAHASE---KLGYVNNKQRQALDYSESLKQKYAHH 136 (197)
Q Consensus 77 ~~~v~~v~~~~~-----------------~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s 136 (197)
...|.+++|+|+ +++|++++.|+.|++||+..+. .+..+.+| ...|.+++|+
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h--------~~~V~~v~~s 221 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH--------SDWVRDVAWA 221 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC--------SSCEEEEECC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC--------CCceEEEEec
Confidence 788999999997 4789999999999999997542 33344433 3458899999
Q ss_pred ccc----ceeeeec-CcceEEeecch
Q psy18074 137 PQI----RRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 137 ~~~----~~l~~~~-~~~~~i~~~~~ 157 (197)
|++ .+|++++ +..+.||+...
T Consensus 222 p~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 222 PSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCCCCCceEEEEcCCCeEEEEEccC
Confidence 986 7788665 55899998764
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=3.5e-22 Score=168.48 Aligned_cols=149 Identities=11% Similarity=0.201 Sum_probs=131.7
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.+|.++++|+.||.|++||+.+ +..+..+.+|.+.|.+++|+|++.++++++.|+.|++||+.++..+..+ .+|...|
T Consensus 625 ~~~~~l~s~~~d~~i~vw~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~~v 702 (1249)
T 3sfz_A 625 QDGQRIASCGADKTLQVFKAET-GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY-DEHSEQV 702 (1249)
T ss_dssp TTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEeCCCeEEEEECCC-CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE-cCCCCcE
Confidence 3789999999999999999987 5778888999999999999999999999999999999999999887766 5688999
Q ss_pred eEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEeecch
Q psy18074 81 THTVWSL--DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQA 157 (197)
Q Consensus 81 ~~v~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~~ 157 (197)
.+++|+| ++.++++++.|+.|++||+.+++.+..+.++... |.+++|+|+++++++++. +.+.+|+...
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~--------v~~~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNS--------VNHCRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSC--------EEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCC--------EEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence 9999999 5568899999999999999999988877766543 789999999999987664 5889999876
Q ss_pred hh
Q psy18074 158 EH 159 (197)
Q Consensus 158 ~~ 159 (197)
.+
T Consensus 775 ~~ 776 (1249)
T 3sfz_A 775 AN 776 (1249)
T ss_dssp TE
T ss_pred Cc
Confidence 53
No 67
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.90 E-value=5.4e-22 Score=147.22 Aligned_cols=151 Identities=11% Similarity=0.044 Sum_probs=114.3
Q ss_pred EcCCCcEEEEEccCCC--------------Cc-eeecccCCCCeEEEEECCCCCEEEEEeCCCc-EEEEECCCCccccee
Q psy18074 9 ANEDFNLYSYDIRQLN--------------SP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKS-LRLYLAHQGHSRDIY 72 (197)
Q Consensus 9 ~~~d~~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-v~i~d~~~~~~~~~~ 72 (197)
|+.||.|++||+.... .+ +..+.+|.+.|.+++|+|++.+|++++.|+. |++||+.+++.+..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 6899999999998632 12 6778899999999999999999999999998 999999999988777
Q ss_pred ecc-cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee--eeeccc-----ccc--------ccccccccceecccC
Q psy18074 73 HTK-RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL--GYVNNK-----QRQ--------ALDYSESLKQKYAHH 136 (197)
Q Consensus 73 ~~~-~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~-----~~~--------~~~~~~~~v~~~~~s 136 (197)
..+ |...|.+++|+|++++|++++.|+.|++||+..+... ..+... ... ...........++|+
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 534 8899999999999999999999999999999765321 111110 000 000001123568999
Q ss_pred cccceeeeec-CcceEEeecchhh
Q psy18074 137 PQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 137 ~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
++++.|+.+. ++.+.+|+.....
T Consensus 315 ~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SSSEEEEEETTTTEEEEEEEEEET
T ss_pred CCCCEEEEEeCCCeEEEEEEEcCC
Confidence 9998888655 5577888876544
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=1.7e-22 Score=153.51 Aligned_cols=157 Identities=13% Similarity=0.261 Sum_probs=121.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCC----------ceeecccCC------------CCeEEEEECCCC--CEEEEEeCCC
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNS----------PLNVHKDMT------------SAVTSVDYSPTG--REFVAGGYDK 56 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~----------~~~~~~~~~------------~~v~~~~~sp~~--~~l~~~~~d~ 56 (197)
.+|.+|++|+.||.|++||+..... ....+.+|. ..|.+++|+|++ ..|++++.|+
T Consensus 38 ~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~ 117 (447)
T 3dw8_B 38 HSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDK 117 (447)
T ss_dssp SSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSS
T ss_pred CCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCC
Confidence 3789999999999999999985321 466788898 889999999998 7999999999
Q ss_pred cEEEEECCCCccc---------------------------------------ceeecccccceeEEEEccCCCEEEEEeC
Q psy18074 57 SLRLYLAHQGHSR---------------------------------------DIYHTKRMQHVTHTVWSLDNKFVISASD 97 (197)
Q Consensus 57 ~v~i~d~~~~~~~---------------------------------------~~~~~~~~~~v~~v~~~~~~~~l~~~~~ 97 (197)
.|++|++.++... ..+..+|...|.+++|+|++++|+++ .
T Consensus 118 ~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~ 196 (447)
T 3dw8_B 118 TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D 196 (447)
T ss_dssp CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C
T ss_pred eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C
Confidence 9999998764321 12235688999999999999999998 7
Q ss_pred CCcEEEEEcCC-CceeeeeccccccccccccccceecccCccc-ceeeeec-CcceEEeecchhh
Q psy18074 98 EMNLRVWKAHA-SEKLGYVNNKQRQALDYSESLKQKYAHHPQI-RRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 98 dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~-~~~~~i~~~~~~~ 159 (197)
|+.|++||+.+ ++.+..+... ...+..+...|.+++|+|++ ++|+++. ++.+.+|++...+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIK-PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECC-CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred CCeEEEEECCCCCceeeeeecc-cccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999999984 3333322111 11233445568999999998 8888665 5589999987654
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.90 E-value=1.6e-22 Score=149.46 Aligned_cols=155 Identities=10% Similarity=0.108 Sum_probs=124.9
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceee--cccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYH--TKRMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~--~~~~~~ 79 (197)
+.+|++|+.|+.|++||+.+ +..+..+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+. ..|...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 163 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPIT-MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDE 163 (366)
T ss_dssp CEEEEEEETTCEEEEECTTT-CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSC
T ss_pred CCEEEEecCCCEEEEEEchh-ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCc
Confidence 67999999999999999987 577888889999999999999 89999999999999999999988766652 467889
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc--------------------cccccccccccceecccCccc
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK--------------------QRQALDYSESLKQKYAHHPQI 139 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--------------------~~~~~~~~~~~v~~~~~s~~~ 139 (197)
|.+++|+|++++|++++.||.|++||+.+++....+... .......+...|.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 999999999999999999999999999987654433210 001111245568899998 5
Q ss_pred ceeeeec-CcceEEeecchhhH
Q psy18074 140 RRIARHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 140 ~~l~~~~-~~~~~i~~~~~~~~ 160 (197)
.+++++. ++.+.+|+......
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTC
T ss_pred CEEEEEecCCEEEEEeCCCccc
Confidence 5676554 56889999876543
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=2.9e-22 Score=152.16 Aligned_cols=156 Identities=10% Similarity=0.252 Sum_probs=120.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-------ecccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEECCCCcc----c
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-------VHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHS----R 69 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-------~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~v~i~d~~~~~~----~ 69 (197)
++.+|++| .|+.|++||++....... .+.+|...|.+++|+|++ ..|++++.|+.|++||++++.. .
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 68899998 799999999984334333 366899999999999998 8999999999999999998875 3
Q ss_pred ceeeccccc------------ceeEEEEccCCCEEEEEeCCCcEEEEEcCC-Cceeeeeccccccccc----ccccc---
Q psy18074 70 DIYHTKRMQ------------HVTHTVWSLDNKFVISASDEMNLRVWKAHA-SEKLGYVNNKQRQALD----YSESL--- 129 (197)
Q Consensus 70 ~~~~~~~~~------------~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~----~~~~~--- 129 (197)
..+ ..|.. .|.+++|+|++++|++++. +.|++||+++ ++.+..+..+....-. +....
T Consensus 267 ~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 267 KLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp EEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 333 34443 8999999999999999998 9999999997 7777777665431100 00011
Q ss_pred ceecccCcccceeeeecC-cceEEeecchhhH
Q psy18074 130 KQKYAHHPQIRRIARHRQ-VPRHIYNAQAEHR 160 (197)
Q Consensus 130 v~~~~~s~~~~~l~~~~~-~~~~i~~~~~~~~ 160 (197)
+..++|+|++++|++++. +.+.+|+....+.
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 234899999999987765 5789999876544
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=3.4e-22 Score=157.15 Aligned_cols=145 Identities=10% Similarity=0.139 Sum_probs=122.7
Q ss_pred ccEEEEEcC-CCcEEEEEccCCCCce-eecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 3 AFVFTAANE-DFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 3 ~~~l~~~~~-d~~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+.++++++. |+.|++||+.. .... ..+..|...|.+++|+|++.+|++++.|+.|++||+.+++.+..+...|...|
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v 534 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSD-LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKI 534 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTE-EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCE
T ss_pred CCEEEEeecCCCeEEEEECCC-ccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCce
Confidence 678899999 99999999985 3333 66778999999999999999999999999999999999988776633388999
Q ss_pred eEEEEcc----------CCCEEEEEeCCCcEEEEEcCCC-ceeeeeccccccccccccccceecccCcccceeeee-cCc
Q psy18074 81 THTVWSL----------DNKFVISASDEMNLRVWKAHAS-EKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH-RQV 148 (197)
Q Consensus 81 ~~v~~~~----------~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~ 148 (197)
++++|+| ++++|++++.||.|++||+.++ +.+..+.++.. .|.+++|+|+++ |+++ .++
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~--------~v~~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD--------GVNNLLWETPST-LVSSGADA 605 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT--------CEEEEEEEETTE-EEEEETTS
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc--------ceEEEEEcCCCC-eEEecCCc
Confidence 9999999 9999999999999999999987 56666655543 478999999999 7654 466
Q ss_pred ceEEeecch
Q psy18074 149 PRHIYNAQA 157 (197)
Q Consensus 149 ~~~i~~~~~ 157 (197)
.+.+|++..
T Consensus 606 ~v~iw~~~~ 614 (615)
T 1pgu_A 606 CIKRWNVVL 614 (615)
T ss_dssp CEEEEEEC-
T ss_pred eEEEEeeec
Confidence 899999753
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1e-22 Score=153.23 Aligned_cols=153 Identities=13% Similarity=0.130 Sum_probs=123.2
Q ss_pred cEEEEEcCCC---cEEEEEccCCCCceeecc-cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 4 FVFTAANEDF---NLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 4 ~~l~~~~~d~---~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
.++++++.|+ .|++||++....+...+. +|...|.+++|+| ++.+|++++.|+.|++||+.+++.+..+ ..|..
T Consensus 228 ~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~~~ 306 (416)
T 2pm9_A 228 TRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-PARGN 306 (416)
T ss_dssp TEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-ECSSS
T ss_pred CEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-cCCCC
Confidence 6899999998 999999987546777787 8999999999999 8999999999999999999998877666 56778
Q ss_pred ceeEEEEccCC-CEEEEEeCCCcEEEEEcCCCceeeeecc--------------c------cc-------cccccccccc
Q psy18074 79 HVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGYVNN--------------K------QR-------QALDYSESLK 130 (197)
Q Consensus 79 ~v~~v~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~--------------~------~~-------~~~~~~~~~v 130 (197)
.|.+++|+|++ .++++++.|+.|++||+.++........ + .. .....+...+
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPS 386 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCS
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCc
Confidence 99999999998 8999999999999999987654322211 0 00 0011134456
Q ss_pred eecccCcccceeeeecC-cceEEeecch
Q psy18074 131 QKYAHHPQIRRIARHRQ-VPRHIYNAQA 157 (197)
Q Consensus 131 ~~~~~s~~~~~l~~~~~-~~~~i~~~~~ 157 (197)
..++|+|+|++|+++.. ..+.||++..
T Consensus 387 ~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 387 PAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 78999999999998774 5889999764
No 73
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.9e-22 Score=165.42 Aligned_cols=148 Identities=9% Similarity=-0.036 Sum_probs=116.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCce--ee----cc-----cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcc--
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPL--NV----HK-----DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS-- 68 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~--~~----~~-----~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~-- 68 (197)
|+.+|++|+.|++|++||+... ... .. +. +|...|.+++|+|+++.|++|+.||.|++|++.++..
T Consensus 446 dg~~laSgs~DgtVrlWd~~~g-~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~ 524 (902)
T 2oaj_A 446 YGTAFITGHSNGSVRIYDASHG-DIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYS 524 (902)
T ss_dssp EEEEEEEEETTSEEEEEESSCC-TTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--
T ss_pred cCcEEEEecCCCcEEEEECCCc-cccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccC
Confidence 6789999999999999999763 211 11 11 7888999999999999999999999999999986631
Q ss_pred -------------------------------------------cceeecccccceeEEEEccCCCEEEEEeCCCcEEEEE
Q psy18074 69 -------------------------------------------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK 105 (197)
Q Consensus 69 -------------------------------------------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd 105 (197)
+.. ..+|.+.|++++|+|+| +||+|+.|+.|++||
T Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 525 VENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTA-VHANKGKTSAINNSNIG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp -------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEE-ECCCSCSEEEEEECBTS-EEEEEETTSEEEEEE
T ss_pred ccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEE-EEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEE
Confidence 122 34588999999999999 999999999999999
Q ss_pred cCCCceeeeeccccccccc-cccccceecccC-----ccc---ceeeeecC-cceEEeec
Q psy18074 106 AHASEKLGYVNNKQRQALD-YSESLKQKYAHH-----PQI---RRIARHRQ-VPRHIYNA 155 (197)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-----~~~---~~l~~~~~-~~~~i~~~ 155 (197)
+.++..+..... ..+. .|...|++++|+ ||| ++|++++. ..+.+|++
T Consensus 603 ~~~~~~~~~~~~---~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 603 RRGPAIIYMENI---REISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TTTTEEEEEEEG---GGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCCeEEEEeeh---hHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 987765432111 1222 455668999999 875 88887665 58899998
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.89 E-value=1.1e-21 Score=143.50 Aligned_cols=147 Identities=12% Similarity=0.156 Sum_probs=125.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++++.|+.|++||+++ ......+..|...+.+++|+|++..|++++.|+.|++||++++.....+ .+...+.
T Consensus 152 ~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~v~ 228 (337)
T 1gxr_A 152 DSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--DFTSQIF 228 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE--ECSSCEE
T ss_pred CCCEEEEEeCCCcEEEEeCCC-CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee--cCCCceE
Confidence 678999999999999999987 5777888889999999999999999999999999999999998876665 3557899
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhhH
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~~ 160 (197)
+++|+|+++++++++.++.|++||+.+++.. .+..+. ..+.+++|+|++++|+++. ++.+.+|+....+.
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~--------~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHE--------SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCS--------SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCc--------cceeEEEECCCCCEEEEecCCCcEEEEECCCCeE
Confidence 9999999999999999999999999887653 333332 3478999999999998766 45789999876543
No 75
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.2e-22 Score=149.88 Aligned_cols=149 Identities=12% Similarity=0.195 Sum_probs=124.6
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccC------CCCeEEEEECCCC-CEEEEEeCCC---cEEEEECCCCc-ccce
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDM------TSAVTSVDYSPTG-REFVAGGYDK---SLRLYLAHQGH-SRDI 71 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~~v~~~~~sp~~-~~l~~~~~d~---~v~i~d~~~~~-~~~~ 71 (197)
+.+|++++.|+.|++||++. ......+..+ ...+.+++|+|++ ..+++++.|+ .|++||++++. ....
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~ 256 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKA-KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT 256 (416)
T ss_dssp TTEEEEESSSSCEEEEETTT-TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC
T ss_pred CcEEEEEcCCCCEEEEECCC-CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE
Confidence 68999999999999999987 4666666655 7889999999997 6889999998 99999999864 4444
Q ss_pred eecccccceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccc-ceeeeec-Cc
Q psy18074 72 YHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQI-RRIARHR-QV 148 (197)
Q Consensus 72 ~~~~~~~~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~-~~ 148 (197)
+..+|...|.+++|+| ++++|++++.|+.|++||+.+++.+..+..+... +.+++|+|++ .+|+++. ++
T Consensus 257 ~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 257 LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW--------CFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC--------CCCEEECTTCTTEEEECCSSS
T ss_pred eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc--------eEEEEECCCCCCEEEEEecCC
Confidence 4226889999999999 8999999999999999999999888877765543 7899999998 7888666 45
Q ss_pred ceEEeecchhhH
Q psy18074 149 PRHIYNAQAEHR 160 (197)
Q Consensus 149 ~~~i~~~~~~~~ 160 (197)
.+.+|++.....
T Consensus 329 ~i~iw~~~~~~~ 340 (416)
T 2pm9_A 329 KIEVQTLQNLTN 340 (416)
T ss_dssp EEEEEESCCCCC
T ss_pred cEEEEEccCCCC
Confidence 789999876543
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=2.1e-22 Score=163.27 Aligned_cols=148 Identities=9% Similarity=0.112 Sum_probs=127.4
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.++++|+.||.|++||+.+ +.....+..|.++|.+++|+|++..|++++.||.|++||+.++.....+ .+|...|
T Consensus 23 p~~~~la~~~~~g~v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~-~~~~~~v 100 (814)
T 3mkq_A 23 PTEPWVLTTLYSGRVEIWNYET-QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF-EAHPDYI 100 (814)
T ss_dssp SSSSEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEeCCCEEEEEECCC-CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-ecCCCCE
Confidence 3788999999999999999987 5778888899999999999999999999999999999999999877666 5678899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCC-ceeeeeccccccccccccccceecccCc-ccceeeeec-CcceEEeecch
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHAS-EKLGYVNNKQRQALDYSESLKQKYAHHP-QIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~~~~i~~~~~ 157 (197)
.+++|+|++++|++++.||.|++||+.++ .....+..+.. .+.+++|+| ++..++++. ++.+.+|+...
T Consensus 101 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH--------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSS--------CEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCC--------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999999999999999999876 44445544443 378999999 888888665 55889999865
Q ss_pred h
Q psy18074 158 E 158 (197)
Q Consensus 158 ~ 158 (197)
.
T Consensus 173 ~ 173 (814)
T 3mkq_A 173 S 173 (814)
T ss_dssp S
T ss_pred C
Confidence 4
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=6.6e-22 Score=147.70 Aligned_cols=146 Identities=5% Similarity=0.045 Sum_probs=118.3
Q ss_pred Cc-cEEEEEcCCCcEEEEEccCCCCceeecc--cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCccccee--ecc
Q psy18074 2 EA-FVFTAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIY--HTK 75 (197)
Q Consensus 2 ~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~--~~~ 75 (197)
++ .+|++|+.|+.|++||+.. ......+. +|...|.+++|+| ++..|++++.|+.|++||+.... ...+ ...
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~ 161 (383)
T 3ei3_B 84 THPTTVAVGSKGGDIILWDYDV-QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFAKTDS 161 (383)
T ss_dssp SCTTEEEEEEBTSCEEEEETTS-TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEECCCC
T ss_pred CCCCEEEEEcCCCeEEEEeCCC-cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEeccCC
Confidence 45 8999999999999999986 34444443 6999999999999 67899999999999999999643 3333 223
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc-eeeeec-CcceEEe
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR-RIARHR-QVPRHIY 153 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~~~~~i~ 153 (197)
|...|.+++|+|++++|++++.|+.|++||+ .++.+..+..+.. .|.+++|+|++. +++++. +..+.+|
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~--------~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA--------KVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS--------CEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC--------cEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 4477999999999999999999999999999 4666666665544 378999999998 777655 5589999
Q ss_pred ecchh
Q psy18074 154 NAQAE 158 (197)
Q Consensus 154 ~~~~~ 158 (197)
++...
T Consensus 233 d~~~~ 237 (383)
T 3ei3_B 233 DLRNI 237 (383)
T ss_dssp EGGGC
T ss_pred eCCCC
Confidence 99763
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.9e-22 Score=147.09 Aligned_cols=150 Identities=11% Similarity=0.211 Sum_probs=122.1
Q ss_pred CCccEEEEEcCCCcEEEEEccCC-CCceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCc--ccceeecc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQL-NSPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGH--SRDIYHTK 75 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~--~~~~~~~~ 75 (197)
.++.+|++|+.|+.|++||+... ......+.+|...|.+++|+|+ +..|++++.||.|++||+.++. .... ...
T Consensus 21 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~ 99 (379)
T 3jrp_A 21 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV-HAV 99 (379)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEE-ECC
T ss_pred CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeee-ecC
Confidence 36889999999999999999731 3566778899999999999987 8999999999999999999886 3333 355
Q ss_pred cccceeEEEEccC--CCEEEEEeCCCcEEEEEcCCCceee--eeccccccccccccccceecccCc-------------c
Q psy18074 76 RMQHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLG--YVNNKQRQALDYSESLKQKYAHHP-------------Q 138 (197)
Q Consensus 76 ~~~~v~~v~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~-------------~ 138 (197)
|...|.+++|+|+ +.++++++.|+.|++||+.++.... .+..+ ...+.+++|+| +
T Consensus 100 ~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 100 HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH--------AIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC--------TTCEEEEEECCCC----------CT
T ss_pred CCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC--------CCceEEEEEcCccccccccccCCCC
Confidence 7789999999999 9999999999999999998774332 22222 33478999999 6
Q ss_pred cceeeeec-CcceEEeecchhh
Q psy18074 139 IRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 139 ~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
+.+++++. ++.+.+|++....
T Consensus 172 ~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 172 SRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp TCEEEEEETTSCEEEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEEecCCC
Confidence 88888665 5589999987543
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=1.2e-21 Score=145.27 Aligned_cols=150 Identities=13% Similarity=0.183 Sum_probs=121.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcc---cceeecccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS---RDIYHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~---~~~~~~~~~ 77 (197)
++.+|++++.|+.|++||+.... .....+..|...|.+++|+|++..|++++.|+.|++||+..+.. .......|.
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 68899999999999999997632 12333467889999999999999999999999999999988763 233345677
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcC------------------CCceeeeeccccccccccccccceecccCccc
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAH------------------ASEKLGYVNNKQRQALDYSESLKQKYAHHPQI 139 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 139 (197)
..|.+++|+|+++++++++.|+.|++||+. .++.+..+..+. ..+.+++|+|++
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~ 214 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC--------GWVHGVCFSANG 214 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS--------SCEEEEEECSSS
T ss_pred CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC--------CeEEEEEECCCC
Confidence 899999999999999999999999999964 445555554333 347899999999
Q ss_pred ceeeeecC-cceEEeecchhh
Q psy18074 140 RRIARHRQ-VPRHIYNAQAEH 159 (197)
Q Consensus 140 ~~l~~~~~-~~~~i~~~~~~~ 159 (197)
.+|+++.. +.+.+|+....+
T Consensus 215 ~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp SEEEEEETTTEEEEEEGGGTT
T ss_pred CEEEEEeCCCEEEEEECCCCc
Confidence 98887664 578999987654
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=8.3e-22 Score=148.30 Aligned_cols=147 Identities=14% Similarity=0.258 Sum_probs=123.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++|+.|+.|++||++........+.+|.+.|.+++|+|++..|++++.|+.|++||+.++.....+ ..|...|.
T Consensus 185 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~~~~v~ 263 (401)
T 4aez_A 185 NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK-TNHNAAVK 263 (401)
T ss_dssp ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE-CCCSSCCC
T ss_pred CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe-cCCcceEE
Confidence 46789999999999999998546677888899999999999999999999999999999999988776655 45778999
Q ss_pred EEEEccCCC-EEEEEe--CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeee--e-cCcceEEeec
Q psy18074 82 HTVWSLDNK-FVISAS--DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIAR--H-RQVPRHIYNA 155 (197)
Q Consensus 82 ~v~~~~~~~-~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~-~~~~~~i~~~ 155 (197)
+++|+|++. ++++++ .|+.|++||+.+++.+..+.... .+.+++|+|++..+++ + .++.+.+|+.
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS---------QVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS---------CEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC---------cEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 999999765 455654 79999999999998887775332 3689999999999987 4 3668899998
Q ss_pred chh
Q psy18074 156 QAE 158 (197)
Q Consensus 156 ~~~ 158 (197)
...
T Consensus 335 ~~~ 337 (401)
T 4aez_A 335 SSS 337 (401)
T ss_dssp ETT
T ss_pred CCc
Confidence 764
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=145.57 Aligned_cols=148 Identities=12% Similarity=0.230 Sum_probs=122.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC--ceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCcccce-eeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRDI-YHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~~~-~~~~~ 76 (197)
++.+|++|+.|+.|++||+.. +. ....+..|...|.+++|+|+ +..|++++.|+.|++||+..+..... ....|
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 146 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 146 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC
T ss_pred CCCEEEEeccCCEEEEEEcCC-CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC
Confidence 378999999999999999986 33 56777789999999999999 99999999999999999998754332 23567
Q ss_pred ccceeEEEEcc-------------CCCEEEEEeCCCcEEEEEcCCCcee----eeeccccccccccccccceecccCcc-
Q psy18074 77 MQHVTHTVWSL-------------DNKFVISASDEMNLRVWKAHASEKL----GYVNNKQRQALDYSESLKQKYAHHPQ- 138 (197)
Q Consensus 77 ~~~v~~v~~~~-------------~~~~l~~~~~dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~- 138 (197)
...|.+++|+| ++.++++++.|+.|++||++++... ..+..+ ...|.+++|+|+
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h--------~~~v~~~~~sp~~ 218 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH--------SDWVRDVAWSPTV 218 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC--------SSCEEEEEECCCC
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc--------cCcEeEEEECCCC
Confidence 78999999999 6999999999999999999876533 233333 344789999999
Q ss_pred --cceeeeec-CcceEEeecchh
Q psy18074 139 --IRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 139 --~~~l~~~~-~~~~~i~~~~~~ 158 (197)
+.+|+++. ++.+.+|+....
T Consensus 219 ~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCeEEEEeCCCEEEEEeCCCC
Confidence 88888766 558899998764
No 82
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=8.8e-22 Score=147.03 Aligned_cols=146 Identities=13% Similarity=0.122 Sum_probs=118.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccC---CCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM---TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
++.+|++++.|+.|++||+.. .....+..+ ...|.+++|+|++..|++++.|+.|++||++ +.....+ ..|..
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~-~~h~~ 205 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKE-KLHKA 205 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEE-ECSSS
T ss_pred CCCEEEEEeCCCEEEEEECCC--CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEe-ccCCC
Confidence 568999999999999999984 445555443 4789999999999999999999999999995 5544444 56788
Q ss_pred ceeEEEEccCCC-EEEEEeCCCcEEEEEcCC----CceeeeeccccccccccccccceecccCc-ccceeeeec-CcceE
Q psy18074 79 HVTHTVWSLDNK-FVISASDEMNLRVWKAHA----SEKLGYVNNKQRQALDYSESLKQKYAHHP-QIRRIARHR-QVPRH 151 (197)
Q Consensus 79 ~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~-~~~~~ 151 (197)
.|.+++|+|+++ ++++++.|+.|++||+++ +..+..+ .+ ...+.+++|+| ++++|+++. ++.+.
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~--------~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PH--------EKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-EC--------SSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cC--------CCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 999999999999 899999999999999987 4444444 22 23478999999 999999766 45889
Q ss_pred EeecchhhH
Q psy18074 152 IYNAQAEHR 160 (197)
Q Consensus 152 i~~~~~~~~ 160 (197)
+|++...+.
T Consensus 277 iwd~~~~~~ 285 (383)
T 3ei3_B 277 VYSSYDWSK 285 (383)
T ss_dssp EEETTBTTS
T ss_pred EEECCCCcc
Confidence 999876544
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=8.3e-22 Score=150.60 Aligned_cols=146 Identities=16% Similarity=0.199 Sum_probs=126.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++|+.|+.|++||+.+ ..++..+.+|...|.+++|+|++..+++++.|+.|++||+.++..+..+ .+|...|.
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~ 356 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL-QGHTALVG 356 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE-eCCCCcEE
Confidence 467899999999999999987 5778888899999999999999999999999999999999999877766 56888999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecchhhH
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHR 160 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~~~ 160 (197)
+++|+ ++++++++.||.|++||+.++.......... .+..++|++++++++++.++.+.+|+....+.
T Consensus 357 ~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 357 LLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTN---------LSAITTFYVSDNILVSGSENQFNIYNLRSGKL 424 (464)
T ss_dssp EEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTT---------CCCEEEEEECSSEEEEEETTEEEEEETTTCCE
T ss_pred EEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCC---------CccEEEEEeCCCEEEEecCCeEEEEECCCCcE
Confidence 99997 5799999999999999999877655443222 24678899999999999888999999876644
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1e-21 Score=145.14 Aligned_cols=154 Identities=12% Similarity=0.112 Sum_probs=125.6
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.++.+|++|+.|+.|++||+.+ +.....+.+|...|.+++|+|++..|++++.|+.|++||+.++.....+. +...+
T Consensus 42 ~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v 118 (369)
T 3zwl_B 42 KEGDLLFSCSKDSSASVWYSLN-GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPV 118 (369)
T ss_dssp TTSCEEEEEESSSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCE
T ss_pred CCCCEEEEEeCCCEEEEEeCCC-chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCe
Confidence 3788999999999999999987 57788899999999999999999999999999999999999998877764 56899
Q ss_pred eEEEEccCCCEEEEEeCC-----CcEEEEEcCCCceeeeeccc---cccccccccc--cceecccCcccceeeeecC-cc
Q psy18074 81 THTVWSLDNKFVISASDE-----MNLRVWKAHASEKLGYVNNK---QRQALDYSES--LKQKYAHHPQIRRIARHRQ-VP 149 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~-~~ 149 (197)
.+++|+|+++++++++.+ +.|.+||+..+.....+... ....+..+.. .+.+++|+|++++++++.. +.
T Consensus 119 ~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 198 (369)
T 3zwl_B 119 KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGK 198 (369)
T ss_dssp EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSE
T ss_pred EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCE
Confidence 999999999999999998 99999999866433222111 1111112222 5789999999999987654 57
Q ss_pred eEEeecch
Q psy18074 150 RHIYNAQA 157 (197)
Q Consensus 150 ~~i~~~~~ 157 (197)
+.+|+...
T Consensus 199 i~i~d~~~ 206 (369)
T 3zwl_B 199 ISKYDVSN 206 (369)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 89999876
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1e-21 Score=145.20 Aligned_cols=153 Identities=8% Similarity=0.092 Sum_probs=121.1
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeeccc-----CCCCeEEEEECCC----CCEEEEEeCCCcEEEEECCCCcccceeec
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKD-----MTSAVTSVDYSPT----GREFVAGGYDKSLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~sp~----~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 74 (197)
..+++++.++.|++||+.+ +..+..+.. |...|.+++|+|+ +.+|++++.||.|++||+.+++....+ .
T Consensus 35 ~~~~~~~~~~~v~vw~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~ 112 (366)
T 3k26_A 35 PLVFATVGSNRVTLYECHS-QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY-V 112 (366)
T ss_dssp CEEEEEEETTEEEEEEECG-GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE-E
T ss_pred ceEEEECCCCEEEEEEcCC-CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee-c
Confidence 3455555567999999986 344444432 5678999999998 668999999999999999998877665 5
Q ss_pred ccccceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEE
Q psy18074 75 KRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHI 152 (197)
Q Consensus 75 ~~~~~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i 152 (197)
+|...|.+++|+| ++++|++++.||.|++||+.+++.+..+... ..+...|.+++|+|++.+|+++. ++.+.+
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 187 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV-----EGHRDEVLSADYDLLGEKIMSCGMDHSLKL 187 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST-----TSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc-----ccccCceeEEEECCCCCEEEEecCCCCEEE
Confidence 6889999999999 8999999999999999999998887776210 11223478999999999998765 558999
Q ss_pred eecchhhHHHH
Q psy18074 153 YNAQAEHRAIR 163 (197)
Q Consensus 153 ~~~~~~~~~~~ 163 (197)
|+....+....
T Consensus 188 ~d~~~~~~~~~ 198 (366)
T 3k26_A 188 WRINSKRMMNA 198 (366)
T ss_dssp EESCSHHHHHH
T ss_pred EECCCCccccc
Confidence 99987655433
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=2.3e-21 Score=145.92 Aligned_cols=147 Identities=13% Similarity=0.136 Sum_probs=123.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.+|++|+.||.|++||+.+ +..+..+.+|...|.++.| ++..+++++.|+.|++||++...........|...|.
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVES-QTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred CCCEEEEECCCCeEEEEECcC-CeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee
Confidence 688999999999999999987 5778888899999999999 5679999999999999999954433333467889999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc-eeeeec---CcceEEeecch
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR-RIARHR---QVPRHIYNAQA 157 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~---~~~~~i~~~~~ 157 (197)
+++|+|++++|++++.|+.|++||+.+++.+..+..+.. .|.+++|+|++. +++++. +..+.+|+...
T Consensus 222 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 222 GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA--------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS--------CCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc--------eEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 999999999999999999999999999888777765544 378999999765 555543 66899999875
Q ss_pred hh
Q psy18074 158 EH 159 (197)
Q Consensus 158 ~~ 159 (197)
.+
T Consensus 294 ~~ 295 (401)
T 4aez_A 294 GA 295 (401)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=5.5e-22 Score=146.25 Aligned_cols=156 Identities=13% Similarity=0.184 Sum_probs=120.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC---CCCEEEEEeCCCcEEEEECCCCcccceee----c
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP---TGREFVAGGYDKSLRLYLAHQGHSRDIYH----T 74 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~~d~~v~i~d~~~~~~~~~~~----~ 74 (197)
++.++++++.|+.|++||++. ... .....|...+.+++|+| ++..+++++.||.|++||++++.....+. .
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred CCCEEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 678999999999999999986 343 34467889999999999 89999999999999999999877655442 3
Q ss_pred ccccceeEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeecc-----------ccccccccccccceecccCccccee
Q psy18074 75 KRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGYVNN-----------KQRQALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l 142 (197)
.|...|.+++|+|+++ ++++++.||.|++||+.++........ .....+..+...|.+++|+|++++|
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 6889999999999998 799999999999999986543211100 0011223334568999999999998
Q ss_pred e-eec-CcceEEeecchhh
Q psy18074 143 A-RHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 143 ~-~~~-~~~~~i~~~~~~~ 159 (197)
+ +++ ++.+.+|++.+..
T Consensus 337 ~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 337 CVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEEEETTSEEEEEEECC--
T ss_pred EEEecCCCcEEEEECCCcc
Confidence 7 555 6689999987643
No 88
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9.8e-22 Score=150.00 Aligned_cols=148 Identities=7% Similarity=0.042 Sum_probs=122.5
Q ss_pred CccEE-EEEcCCCcEEEEEcc--CCCCceeecc--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc---eee
Q psy18074 2 EAFVF-TAANEDFNLYSYDIR--QLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD---IYH 73 (197)
Q Consensus 2 ~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~---~~~ 73 (197)
++.+| ++|+.|+.|++||+. . +.....+. .|...|.+++|+|++..|++++.+|.+++|++.++.... ...
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~ 191 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTS-KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI 191 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSS-SSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS
T ss_pred CCCEEEEEECCCCeEEEEECcCCC-CceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee
Confidence 56775 899999999999998 5 56666665 567899999999999999999999999999998876543 122
Q ss_pred cccccceeEEEEccC---CCEEEEEeCCCcEEEEEcCCCceeeeec-cccccccccccccceecccCcccceeeeecC-c
Q psy18074 74 TKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASEKLGYVN-NKQRQALDYSESLKQKYAHHPQIRRIARHRQ-V 148 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~ 148 (197)
.+|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+. ++. ..|.+++|+ ++++|++++. .
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~--------~~v~~~~~s-d~~~l~s~~~d~ 262 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK--------HFVSSICCG-KDYLLLSAGGDD 262 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS--------SCEEEEEEC-STTEEEEEESSS
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC--------CceEEEEEC-CCCEEEEEeCCC
Confidence 567789999999999 9999999999999999999888776633 333 347899999 9999997664 5
Q ss_pred ceEEeecchhh
Q psy18074 149 PRHIYNAQAEH 159 (197)
Q Consensus 149 ~~~i~~~~~~~ 159 (197)
.+.+|++...+
T Consensus 263 ~v~vwd~~~~~ 273 (450)
T 2vdu_B 263 KIFAWDWKTGK 273 (450)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCc
Confidence 88999987654
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.8e-22 Score=152.16 Aligned_cols=144 Identities=12% Similarity=0.100 Sum_probs=115.0
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCC-----CeEEEEECCCCCEEEEEeCCCcEEEEECCCCcc-------
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS-----AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS------- 68 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~------- 68 (197)
.||..||+++.||.|++||... .+..+. |.. .+.+++|||+|+.|++|+.||.|++||+.++..
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 4789999999999999999542 455555 665 499999999999999999999999999998753
Q ss_pred ccee---ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCcee---eeec-cccccccccccccceecccCcccce
Q psy18074 69 RDIY---HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL---GYVN-NKQRQALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 69 ~~~~---~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~ 141 (197)
+..+ ..+|...|.+++|+|+| +++++.|+.+++||+..+... .++. ++. ..|.+++|+ |+.
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~--------~~V~svaFs--g~~ 238 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASR--------RKITDLKIV--DYK 238 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCS--------SCCCCEEEE--TTE
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeeccccc--------CcEEEEEEE--CCE
Confidence 2333 25677899999999999 788899999999999876632 2342 332 237899999 688
Q ss_pred eeeecCcceEEeecchhhH
Q psy18074 142 IARHRQVPRHIYNAQAEHR 160 (197)
Q Consensus 142 l~~~~~~~~~i~~~~~~~~ 160 (197)
||++.++.+.+|+....+.
T Consensus 239 LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 239 VVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp EEEECSSEEEEEETTTTEE
T ss_pred EEEEeCCeEEEEECCCCeE
Confidence 8888788999999875544
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=2.1e-21 Score=142.37 Aligned_cols=147 Identities=11% Similarity=0.154 Sum_probs=126.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCC--CEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG--REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++.+|++|+.|+.+++||..........+.+|...+..++|++++ ..+++++.|+.|++||+.++.....+ .+|...
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~-~~h~~~ 217 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH-IGHTGY 217 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE-CCCSSC
T ss_pred cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe-cCCCCc
Confidence 567899999999999999976444455667889999999999865 46789999999999999998876665 668899
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecchh
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAE 158 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~ 158 (197)
|.+++|+|++++|++++.|+.|++||+.+.+.+..+..+.. +.+++|+|++.+++++.+..+.+|++...
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI---------INALCFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSC---------EEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCce---------EEeeecCCCCceeeccCCCEEEEEECCCC
Confidence 99999999999999999999999999999988877765432 68999999999999888889999998644
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.89 E-value=2.1e-21 Score=147.39 Aligned_cols=148 Identities=17% Similarity=0.291 Sum_probs=118.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCC--CceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCc-ccceeecccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGH-SRDIYHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~-~~~~~~~~~~ 77 (197)
++.+|++++.|+.|++||++... .+...+..|...|.+++|+|++. .|++|+.||.|++||++... .+..+ ..|.
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~ 321 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHK 321 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCC
Confidence 57899999999999999998642 56677788999999999999987 68899999999999999844 33343 5678
Q ss_pred cceeEEEEccCCC-EEEEEeCCCcEEEEEcCCC--------------ceeeeeccccccccccccccceecccCcccc-e
Q psy18074 78 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHAS--------------EKLGYVNNKQRQALDYSESLKQKYAHHPQIR-R 141 (197)
Q Consensus 78 ~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~--------------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 141 (197)
..|.+++|+|+++ ++++++.|+.|++||+... +.+....+ +...|.+++|+|++. +
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------h~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGG--------HTAKISDFSWNPNEPWI 393 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCC--------CSSCEEEEEECSSSTTE
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCC--------CCCCceEEEECCCCCCE
Confidence 8999999999985 6889999999999999862 22222222 234589999999998 6
Q ss_pred eeeec-CcceEEeecchh
Q psy18074 142 IARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 142 l~~~~-~~~~~i~~~~~~ 158 (197)
|+++. ++.+.||+....
T Consensus 394 l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEETTSEEEEEEECHH
T ss_pred EEEEECCCCEEEeEcccc
Confidence 66555 557899998654
No 92
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=4.5e-22 Score=149.54 Aligned_cols=154 Identities=11% Similarity=0.175 Sum_probs=109.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccee--------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHSRDIY-------- 72 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~~~~~-------- 72 (197)
|+++||+|+.|++|++||+.. ..+...+..|...+.+++|+|++. +|++++.|+.|++||++++......
T Consensus 155 d~~~las~s~D~tv~~Wd~~~-~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTD-EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEET-TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred CCCEEEEEECCCeEEEEECCC-CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 678999999999999999986 456667778899999999999875 7899999999999999876532211
Q ss_pred ----------------ecccccceeEEEEc-cCCCEEEEEeCCCcEEEEEcCCCceeeeecccc----------------
Q psy18074 73 ----------------HTKRMQHVTHTVWS-LDNKFVISASDEMNLRVWKAHASEKLGYVNNKQ---------------- 119 (197)
Q Consensus 73 ----------------~~~~~~~v~~v~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---------------- 119 (197)
..+|...+.++.|+ |+++.+++++.|+.+++||+.+++....+..+.
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 13466788899986 799999999999999999986544322211100
Q ss_pred --------------------------------------ccccccccccceecccCcccceeeeecCcceEEeecc
Q psy18074 120 --------------------------------------RQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQ 156 (197)
Q Consensus 120 --------------------------------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~ 156 (197)
...+..+...|.+++|+|||++||+++++.+.+|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 0111222336778888888888888888777777654
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.7e-21 Score=148.65 Aligned_cols=154 Identities=14% Similarity=0.118 Sum_probs=126.1
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCC---ceeecccCCCCeEEEEECCC---CCEEEEEeCCCcEEEEECCCCcccceeec
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPT---GREFVAGGYDKSLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 74 (197)
.++.+|++|+.++.|++|++..... +...+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++..+..+..
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 3688999999999999999976321 33367889999999999999 88999999999999999999887766556
Q ss_pred ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc-ccc----------------ccccccceecccCc
Q psy18074 75 KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR-QAL----------------DYSESLKQKYAHHP 137 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~----------------~~~~~~v~~~~~s~ 137 (197)
+|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+..+.. ..+ ......+..++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 788999999999 999999999999999999999988777653321 000 01123578899999
Q ss_pred ccceeeeec--CcceEEeec
Q psy18074 138 QIRRIARHR--QVPRHIYNA 155 (197)
Q Consensus 138 ~~~~l~~~~--~~~~~i~~~ 155 (197)
++++|+++. +..+.+|++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 999998664 558899998
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=1.8e-21 Score=147.37 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=121.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCC---CceeecccCCCCeEEEEECCCCC-EEEE--EeCCCcEEEEECCCCcccceeecc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGR-EFVA--GGYDKSLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~sp~~~-~l~~--~~~d~~v~i~d~~~~~~~~~~~~~ 75 (197)
++.++++++.|+.+++|+..... ..+.....|...|.+++|+|.+. .+++ |+.|+.|++||+.++.+...+..
T Consensus 241 ~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~- 319 (420)
T 4gga_A 241 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA- 319 (420)
T ss_dssp TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-
T ss_pred CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-
Confidence 67899999999999999997532 24556678899999999999765 4444 45799999999999988776633
Q ss_pred cccceeEEEEccCCCEEEEEe--CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEE
Q psy18074 76 RMQHVTHTVWSLDNKFVISAS--DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHI 152 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i 152 (197)
...+.++.|+|+++.+++++ .|+.|++||+.+++.+..+.+|... |.+++|+|||++|++++. ..+.|
T Consensus 320 -~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~--------V~~l~~spdg~~l~S~s~D~tvri 390 (420)
T 4gga_A 320 -HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--------VLSLTMSPDGATVASAAADETLRL 390 (420)
T ss_dssp -SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--------EEEEEECTTSSCEEEEETTTEEEE
T ss_pred -ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC--------EEEEEEcCCCCEEEEEecCCeEEE
Confidence 36899999999999988654 7899999999999999888877654 789999999999997765 58999
Q ss_pred eecchhh
Q psy18074 153 YNAQAEH 159 (197)
Q Consensus 153 ~~~~~~~ 159 (197)
|++....
T Consensus 391 Wdv~~~~ 397 (420)
T 4gga_A 391 WRCFELD 397 (420)
T ss_dssp ECCSCSS
T ss_pred EECCCCC
Confidence 9986543
No 95
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=9.8e-22 Score=147.11 Aligned_cols=156 Identities=12% Similarity=0.101 Sum_probs=122.8
Q ss_pred CccE-EEEEcCCCcEEEEEccC------CCCcee-----ec-------ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Q psy18074 2 EAFV-FTAANEDFNLYSYDIRQ------LNSPLN-----VH-------KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL 62 (197)
Q Consensus 2 ~~~~-l~~~~~d~~i~i~d~~~------~~~~~~-----~~-------~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d 62 (197)
++.+ |++++.|+.|++||+.. . ..+. .+ ..|...+.+++|+|++ .+++++.|+.|++||
T Consensus 136 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 136 LLSHRLVATDVKGTTYIWKFHPFADESNS-LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp --CEEEEEEETTSCEEEEEEESSSSHHHH-TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCceEEEEEeCCCcEEEEeCCcccccccc-ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 5777 99999999999999985 2 2333 45 4478899999999999 999999999999999
Q ss_pred CCCCcccceeecc---c---ccceeEEEEccCCCEEEEEeCC---CcEEEEEcCCCceeeeecccccc--cc---ccccc
Q psy18074 63 AHQGHSRDIYHTK---R---MQHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGYVNNKQRQ--AL---DYSES 128 (197)
Q Consensus 63 ~~~~~~~~~~~~~---~---~~~v~~v~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~--~~---~~~~~ 128 (197)
++++..+..+ .. | ...|.+++|+|++++|++++.| +.|++||+.+++.+..+...... .. ..+..
T Consensus 214 ~~~~~~~~~~-~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 214 LSTLRPLYNF-ESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp TTTTEEEEEE-ECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred CCCCceeEEE-eccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9998776665 34 6 7899999999999999999999 99999999999888777651000 00 00233
Q ss_pred cceecccCcccceeeeec-CcceEEeecchhhH
Q psy18074 129 LKQKYAHHPQIRRIARHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 129 ~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~~ 160 (197)
.|.+++|+|++++|+++. ++.+.+|++...+.
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 478999999999999766 45789999876543
No 96
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.9e-21 Score=145.25 Aligned_cols=145 Identities=15% Similarity=0.240 Sum_probs=126.5
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEE
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT 83 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v 83 (197)
..+++++.++.|++||+.. ..+...+..|...|.+++|+|++..|++++.|+.|++||+.++.....+ ..|...|.++
T Consensus 218 ~~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~ 295 (425)
T 1r5m_A 218 DKFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCF-YGHSQSIVSA 295 (425)
T ss_dssp TEEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEE-CCCSSCEEEE
T ss_pred CEEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEe-cCCCccEEEE
Confidence 4688899999999999987 5777788899999999999999999999999999999999988776665 4577899999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 84 VWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 84 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
+|+|++ ++++++.|+.|++||+.+++.+..+..+.. .+.+++|+|++++|+++. ++.+.+|++...+
T Consensus 296 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV--------PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC--------CEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred EECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc--------cEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 999999 999999999999999999988877765543 378999999999999766 4589999997665
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=3.4e-21 Score=147.25 Aligned_cols=155 Identities=15% Similarity=0.198 Sum_probs=123.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++|+.||.|++||+.+ +..+..+.+|.+.|.+++|+|++ .+++++.||.|++||+.++.....+ .+|...|.
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~-~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~-~~h~~~v~ 207 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVF-EGHNSTVR 207 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEE
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEE-CCCCCccE
Confidence 578999999999999999987 57788899999999999999987 8999999999999999999877665 56888999
Q ss_pred EEEEc--cCCCEEEEEeCCCcEEEEEcCCCceee-----------------------eecccc-----------------
Q psy18074 82 HTVWS--LDNKFVISASDEMNLRVWKAHASEKLG-----------------------YVNNKQ----------------- 119 (197)
Q Consensus 82 ~v~~~--~~~~~l~~~~~dg~i~vwd~~~~~~~~-----------------------~~~~~~----------------- 119 (197)
+++|+ ++++++++++.|+.|++||+.++.... .+.++.
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~ 287 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS 287 (464)
T ss_dssp EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE
T ss_pred EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe
Confidence 99998 477889999999999999987654221 111110
Q ss_pred ---------------ccccccccccceecccCcccceeeeecC-cceEEeecchhh
Q psy18074 120 ---------------RQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQAEH 159 (197)
Q Consensus 120 ---------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~~~~ 159 (197)
...+..+...+.+++|+|++.++++++. +.+.+|+....+
T Consensus 288 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 288 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 0112234557889999999999987665 588999987553
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=1e-20 Score=143.63 Aligned_cols=147 Identities=13% Similarity=0.188 Sum_probs=117.4
Q ss_pred cc-EEEEEcCCCcEEEEEccCCCC------ceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCc---ccce
Q psy18074 3 AF-VFTAANEDFNLYSYDIRQLNS------PLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGH---SRDI 71 (197)
Q Consensus 3 ~~-~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~---~~~~ 71 (197)
+. +|++|+.||.|++||+..... +...+..|...|.+++|+| ++..|++++.|+.|++||++++. ....
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 44 899999999999999985221 1455678999999999999 67889999999999999999873 3333
Q ss_pred eecccccceeEEEEccCCC-EEEEEeCCCcEEEEEcCC-CceeeeeccccccccccccccceecccCcccc-eeeee-cC
Q psy18074 72 YHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA-SEKLGYVNNKQRQALDYSESLKQKYAHHPQIR-RIARH-RQ 147 (197)
Q Consensus 72 ~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~-~~ 147 (197)
+ ..|...|++++|+|++. ++++++.||.|++||+++ +..+..+..+.. .|.+++|+|++. +++++ .+
T Consensus 273 ~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~--------~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 273 V-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD--------EIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp E-ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS--------CEEEEEECSSCTTEEEEEETT
T ss_pred e-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC--------CEEEEEECCCCCCEEEEEeCC
Confidence 3 46778999999999987 588999999999999997 445555555443 478999999985 46554 46
Q ss_pred cceEEeecchh
Q psy18074 148 VPRHIYNAQAE 158 (197)
Q Consensus 148 ~~~~i~~~~~~ 158 (197)
+.+.||++...
T Consensus 344 ~~i~iwd~~~~ 354 (430)
T 2xyi_A 344 RRLHVWDLSKI 354 (430)
T ss_dssp SCCEEEEGGGT
T ss_pred CcEEEEeCCCC
Confidence 68999999764
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=4.9e-22 Score=148.01 Aligned_cols=173 Identities=10% Similarity=-0.044 Sum_probs=123.3
Q ss_pred CccEEEE--EcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccce-eeccccc
Q psy18074 2 EAFVFTA--ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI-YHTKRMQ 78 (197)
Q Consensus 2 ~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~-~~~~~~~ 78 (197)
||+++++ ++.|+.|++||+.+ ..+...+ .|.+.|.+++|+|+|.++++++.+ .+.+|+..++..... ....|..
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~-~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSD-LTEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTT-TEEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE
T ss_pred CCCEEEEEECCCCCEEEEeECCC-CcEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC
Confidence 6777654 45789999999987 4556665 478899999999999999998855 467777777665433 3456778
Q ss_pred ceeEEEEccCCCEEEEEeCCC----cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEe
Q psy18074 79 HVTHTVWSLDNKFVISASDEM----NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIY 153 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~ 153 (197)
.|.+++|+|+++++++++.++ .+.+|++.......... ..+..+...|.+++|+|||++||+++. ..+.||
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS----KQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE----EEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee----eeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 899999999999999988776 58889987654322110 111222344789999999999997765 589999
Q ss_pred ecchhhHHHHh-HhHhhhhhhhcCCCCCC
Q psy18074 154 NAQAEHRAIRS-KQKRKESNKRTHSAPGT 181 (197)
Q Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 181 (197)
++...+..... .-+........+++.+.
T Consensus 297 d~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 297 KLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp ETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred ECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 99766543322 22344455566666554
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.7e-21 Score=150.02 Aligned_cols=148 Identities=5% Similarity=0.028 Sum_probs=110.6
Q ss_pred CCccEEEEEcCCCcEEEEEccCC----------------------------CCceeecc-cCCCCeEEEEECCCCCEEEE
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQL----------------------------NSPLNVHK-DMTSAVTSVDYSPTGREFVA 51 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~----------------------------~~~~~~~~-~~~~~v~~~~~sp~~~~l~~ 51 (197)
.||.++|+++.|++|+ |.... .+....+. .|...|.+++|||+|..|++
T Consensus 25 pDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs 102 (588)
T 2j04_A 25 RDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAV 102 (588)
T ss_dssp TTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEE
T ss_pred CCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEE
Confidence 4899999999999994 32211 01111122 45678999999999999999
Q ss_pred EeCCCcEEEEECCCCcccceeeccccc-----ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce-------eeeecccc
Q psy18074 52 GGYDKSLRLYLAHQGHSRDIYHTKRMQ-----HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK-------LGYVNNKQ 119 (197)
Q Consensus 52 ~~~d~~v~i~d~~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~-------~~~~~~~~ 119 (197)
++.||.|++||... ++..+ . |.. .+.+++|||||++|++|+.||.|++||+.++.. +.++..+.
T Consensus 103 ~s~dg~V~iwd~~~--~l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~ 178 (588)
T 2j04_A 103 LSNNGNVSVFKDNK--MLTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD 178 (588)
T ss_dssp EETTSCEEEEETTE--EEEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC
T ss_pred EeCCCcEEEEeCCc--eeeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc
Confidence 99999999999654 33333 2 433 599999999999999999999999999988752 34442222
Q ss_pred ccccccccccceecccCcccceeeeecCcceEEeecchhh
Q psy18074 120 RQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEH 159 (197)
Q Consensus 120 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~~ 159 (197)
..|.++|.+++|+||| .++++.+..+.+|++...+
T Consensus 179 ----~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 179 ----AGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp ----TTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred ----ccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 1234568999999999 7777888899999986544
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.87 E-value=3.6e-21 Score=141.90 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=121.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCC----CeEEEE----ECCCCCEEEEEeCCCcEEEEECCCCcccceee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS----AVTSVD----YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 73 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~v~~~~----~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~ 73 (197)
++.+|++++.|+.|++||+.....+...+..|.+ .+.+++ |+|++..+++++.|+.|++||++++.....
T Consensus 128 ~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-- 205 (357)
T 3i2n_A 128 GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-- 205 (357)
T ss_dssp CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--
T ss_pred CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--
Confidence 5779999999999999999874446777766554 788888 789999999999999999999999876443
Q ss_pred cccccceeEEEEcc---CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc-eeeeec-Cc
Q psy18074 74 TKRMQHVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR-RIARHR-QV 148 (197)
Q Consensus 74 ~~~~~~v~~v~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~~ 148 (197)
..|...|.+++|+| ++.++++++.||.|++||+++++....+... .+..+...+.+++|+|++. +++++. ++
T Consensus 206 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 282 (357)
T 3i2n_A 206 TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV---SEKAHKSTVWQVRHLPQNRELFLTAGGAG 282 (357)
T ss_dssp EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE---EEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee---ccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence 45678999999999 9999999999999999999877655444311 1112334578999999998 677655 55
Q ss_pred ceEEeecchhh
Q psy18074 149 PRHIYNAQAEH 159 (197)
Q Consensus 149 ~~~i~~~~~~~ 159 (197)
.+.+|++....
T Consensus 283 ~i~iwd~~~~~ 293 (357)
T 3i2n_A 283 GLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEEECCS
T ss_pred cEEEeecCCCc
Confidence 88999987543
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.1e-21 Score=158.29 Aligned_cols=154 Identities=12% Similarity=0.147 Sum_probs=123.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc----------ee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRD----------IY 72 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~----------~~ 72 (197)
+.+|++++.|+.|++||+.+ ++.+..+. |.+.|++++|+|++.++++|+.||.|++||+.++.+.. ..
T Consensus 69 g~~L~S~s~D~~v~lWd~~~-~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 69 GIYLVVINAKDTVYVLSLYS-QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFF 146 (902)
T ss_dssp TTEEEEEETTCEEEEEETTT-CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTC
T ss_pred CCEEEEEECcCeEEEEECCC-CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccc
Confidence 56899999999999999987 46666664 67899999999999999999999999999999876531 11
Q ss_pred ecccccceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeecccccc----------ccccccccceecccCcccce
Q psy18074 73 HTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ----------ALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 73 ~~~~~~~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~----------~~~~~~~~v~~~~~s~~~~~ 141 (197)
..+|...|.+++|+|+ +..+++++.|+.| +||+.+++.+..+..+... ....+...|.+++|+|+|++
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 2457789999999996 5788999999999 9999999888777654110 11122356899999999999
Q ss_pred eeeecC-cceEEeecchhh
Q psy18074 142 IARHRQ-VPRHIYNAQAEH 159 (197)
Q Consensus 142 l~~~~~-~~~~i~~~~~~~ 159 (197)
|++++. +.+.+|+....+
T Consensus 226 lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEETTCCEEEEETTTCC
T ss_pred EEEEECCCeEEEEECCCCc
Confidence 997664 589999987643
No 103
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=9.1e-21 Score=140.04 Aligned_cols=137 Identities=12% Similarity=0.167 Sum_probs=112.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEE--CCCCCEEEEEeCCCcEEEEECCCCccccee-------
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY--SPTGREFVAGGYDKSLRLYLAHQGHSRDIY------- 72 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~------- 72 (197)
++.+|++++.|+.|++||+.. .... .+..|...|.+++| +|++..|++++.|+.|++||++++.....+
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 174 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSS-NQAI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY 174 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTT-TEEE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred CCCEEEEEcCCCcEEEEEcCC-CCce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence 688999999999999999986 3433 46679999999999 999999999999999999999765432111
Q ss_pred --------------------------------------------------------------------------------
Q psy18074 73 -------------------------------------------------------------------------------- 72 (197)
Q Consensus 73 -------------------------------------------------------------------------------- 72 (197)
T Consensus 175 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 175 CADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp EEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred EEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence
Q ss_pred --eccccc------------ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcc
Q psy18074 73 --HTKRMQ------------HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQ 138 (197)
Q Consensus 73 --~~~~~~------------~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 138 (197)
...|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+..+.. .|.+++|+|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------~v~~~~~s~~ 326 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ--------PISACCFNHN 326 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS--------CEEEEEECTT
T ss_pred eeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC--------CceEEEECCC
Confidence 011222 599999999999999999999999999999988887766544 3789999999
Q ss_pred cceeeeecCc
Q psy18074 139 IRRIARHRQV 148 (197)
Q Consensus 139 ~~~l~~~~~~ 148 (197)
+++|++++.+
T Consensus 327 g~~l~~~s~d 336 (368)
T 3mmy_A 327 GNIFAYASSY 336 (368)
T ss_dssp SSCEEEEECC
T ss_pred CCeEEEEecc
Confidence 9999977643
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=9.4e-21 Score=140.56 Aligned_cols=143 Identities=10% Similarity=0.025 Sum_probs=110.6
Q ss_pred EEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCC-----------------------------------CEE
Q psy18074 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-----------------------------------REF 49 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-----------------------------------~~l 49 (197)
++++|+.|+.|++||..+ +.++..+. +...|.++.++++. ..+
T Consensus 73 ~~~~~~~d~~v~iWd~~~-~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~l 150 (355)
T 3vu4_A 73 VAFVTGVKEVVHIWDDVK-KQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLL 150 (355)
T ss_dssp EEEECSSTTEEEEEETTT-TEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEE
T ss_pred EEEEECCccEEEEEECCC-CcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEE
Confidence 336678889999999986 56666664 56788888887753 233
Q ss_pred EE--EeCCCcEEEEECCCCcc----------------cceeecccccceeEEEEccCCCEEEEEeCCCc-EEEEEcCCCc
Q psy18074 50 VA--GGYDKSLRLYLAHQGHS----------------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMN-LRVWKAHASE 110 (197)
Q Consensus 50 ~~--~~~d~~v~i~d~~~~~~----------------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~-i~vwd~~~~~ 110 (197)
++ |+.+|.|++||+.++.. ... ..+|...|.+++|+|+|++|++++.|++ |++||+.+++
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~-~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL-IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEE-ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEE-EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 33 46788899999887541 222 3678899999999999999999999998 9999999999
Q ss_pred eeeeec-c-ccccccccccccceecccCcccceeeeecC-cceEEeecchh
Q psy18074 111 KLGYVN-N-KQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQAE 158 (197)
Q Consensus 111 ~~~~~~-~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~~~ 158 (197)
.+..+. + +.. .|.+++|+|++++|++++. ..+.||++...
T Consensus 230 ~~~~~~~g~h~~--------~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 230 LVREFRRGLDRA--------DVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEECTTCCS--------CEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEEcCCCCC--------cEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 888876 3 332 3789999999999997765 58899998754
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.6e-21 Score=143.71 Aligned_cols=150 Identities=9% Similarity=0.027 Sum_probs=118.7
Q ss_pred CccEEEEEcCCCcEEEEEccC--CCCceeecc----------c--CCCCeEEEE--ECCCCCEEEEEeCCCcEEEEECCC
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQ--LNSPLNVHK----------D--MTSAVTSVD--YSPTGREFVAGGYDKSLRLYLAHQ 65 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~----------~--~~~~v~~~~--~sp~~~~l~~~~~d~~v~i~d~~~ 65 (197)
++.+|++|+.|+.|++||+.. .+.....+. . +...+.++. ++|++..|++++.|+.|++||+++
T Consensus 122 ~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 122 NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 678999999999999999941 123222221 1 455677776 678899999999999999999999
Q ss_pred Ccccceeecc-cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeec-cccccccccccccceec----ccCccc
Q psy18074 66 GHSRDIYHTK-RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVN-NKQRQALDYSESLKQKY----AHHPQI 139 (197)
Q Consensus 66 ~~~~~~~~~~-~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~v~~~----~~s~~~ 139 (197)
+..+..+... |...|.+++|+|++++|++++.||.|++||+++++.+..+. .+.. .|.++ .|+|++
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~s~~~ 273 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA--------PITHVEVCQFYGKNS 273 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE--------EEEEEEECTTTCTTE
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC--------ceEEEEeccccCCCc
Confidence 9887776432 77899999999999999999999999999999988887765 3332 25677 677789
Q ss_pred ceeeeecCc-ceEEeecchhh
Q psy18074 140 RRIARHRQV-PRHIYNAQAEH 159 (197)
Q Consensus 140 ~~l~~~~~~-~~~i~~~~~~~ 159 (197)
.+|+++..+ .+.+|++...+
T Consensus 274 ~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 274 VIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEEEEESTTEEEEEEETTTTE
T ss_pred cEEEEEcCCCcEEEEEcCCCc
Confidence 899977655 79999997654
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1e-20 Score=152.76 Aligned_cols=148 Identities=13% Similarity=0.242 Sum_probs=122.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC--ceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCcccc-eeeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRD-IYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~~~-~~~~~~ 76 (197)
++.+|++|+.||.|++||+.+ +. ....+..|...|.+++|+|+ +..+++++.||.|++||+.++.... ....+|
T Consensus 66 ~~~~l~s~s~Dg~I~vwd~~~-~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~ 144 (753)
T 3jro_A 66 FGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 144 (753)
T ss_dssp SCSEEEEEETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC
T ss_pred CCCEEEEEeCCCeEEEEECCC-CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC
Confidence 388999999999999999986 33 56777889999999999999 9999999999999999999874322 224567
Q ss_pred ccceeEEEEcc-------------CCCEEEEEeCCCcEEEEEcCCCce----eeeeccccccccccccccceecccCcc-
Q psy18074 77 MQHVTHTVWSL-------------DNKFVISASDEMNLRVWKAHASEK----LGYVNNKQRQALDYSESLKQKYAHHPQ- 138 (197)
Q Consensus 77 ~~~v~~v~~~~-------------~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~- 138 (197)
...|.+++|+| ++.++++++.||.|++||++++.. ...+.++. ..|.+++|+|+
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~--------~~V~~l~~sp~~ 216 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS--------DWVRDVAWSPTV 216 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS--------SCEEEEEECCCC
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC--------CcEEEEEeccCC
Confidence 88999999999 589999999999999999987643 33333333 44789999999
Q ss_pred --cceeeeec-CcceEEeecchh
Q psy18074 139 --IRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 139 --~~~l~~~~-~~~~~i~~~~~~ 158 (197)
+.++++++ ++.+.+|+....
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCCEEEEEecCCEEEEecCCCC
Confidence 89888766 458899998764
No 107
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=8.8e-21 Score=153.79 Aligned_cols=151 Identities=14% Similarity=0.241 Sum_probs=129.9
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
.++.++++++.|+.|++||+.........+.+|...|.+++|+| ++..+++++.||.|++||+.++.....+...+...
T Consensus 107 ~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~ 186 (814)
T 3mkq_A 107 PTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG 186 (814)
T ss_dssp SSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCC
Confidence 36789999999999999999864466777889999999999999 88899999999999999999887766665555588
Q ss_pred eeEEEEcc--CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 80 VTHTVWSL--DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 80 v~~v~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
+.+++|+| ++.++++++.||.|++||+.+++.+..+..+... +.+++|+|++.++++++ ++.+.+|+..
T Consensus 187 v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN--------VSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp CCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSC--------EEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred EEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC--------EEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 99999999 9999999999999999999999888777665443 78999999999988766 5689999987
Q ss_pred hhh
Q psy18074 157 AEH 159 (197)
Q Consensus 157 ~~~ 159 (197)
..+
T Consensus 259 ~~~ 261 (814)
T 3mkq_A 259 TYK 261 (814)
T ss_dssp TCS
T ss_pred CCc
Confidence 543
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-20 Score=136.16 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=121.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++++.|+.|++|| . ......+..|...+.++.|+| ++..+++++.|+.|++||. +.....+...|...+
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i 187 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--E-GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVV 187 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--T-TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCE
T ss_pred cCCEEEEEeCCCCEEEEc--C-CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccE
Confidence 467899999999999999 2 566778889999999999988 8999999999999999993 344444434477899
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecchhhH
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHR 160 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~~~ 160 (197)
.+++|+|++. +++++.|+.|++||+.+++.+..+..+... +.+++|+|++.+++.+.++.+.+|+....+.
T Consensus 188 ~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 258 (313)
T 3odt_A 188 RHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF--------VYCIKLLPNGDIVSCGEDRTVRIWSKENGSL 258 (313)
T ss_dssp EEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC--------EEEEEECTTSCEEEEETTSEEEEECTTTCCE
T ss_pred EEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce--------EEEEEEecCCCEEEEecCCEEEEEECCCCce
Confidence 9999999998 889999999999999999888877665543 7899999999766666777999999876643
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1e-20 Score=152.83 Aligned_cols=148 Identities=11% Similarity=0.208 Sum_probs=121.3
Q ss_pred CccEEEEEcCCCcEEEEEccCC-CCceeecccCCCCeEEEEECCC--CCEEEEEeCCCcEEEEECCCCcc--cceeeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQL-NSPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHS--RDIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~v~i~d~~~~~~--~~~~~~~~ 76 (197)
++.++++|+.||.|++||+... ......+.+|.++|.+++|+|+ +..|++++.||.|++||+.++.. ... ...|
T Consensus 20 dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~-~~~h 98 (753)
T 3jro_A 20 YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAV-HAVH 98 (753)
T ss_dssp SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEE-ECCC
T ss_pred CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccc-ccCC
Confidence 6889999999999999999731 3566778899999999999988 89999999999999999998762 222 3567
Q ss_pred ccceeEEEEccC--CCEEEEEeCCCcEEEEEcCCCceee--eeccccccccccccccceecccCc-------------cc
Q psy18074 77 MQHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLG--YVNNKQRQALDYSESLKQKYAHHP-------------QI 139 (197)
Q Consensus 77 ~~~v~~v~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~-------------~~ 139 (197)
...|.+++|+|+ ++++++++.||.|++||+.++.... .+..+ ...+.+++|+| ++
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~--------~~~v~~l~~~p~~~~~~~~~~~~~d~ 170 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH--------AIGVNSASWAPATIEEDGEHNGTKES 170 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC--------SSCEEEEEECCCC---------CGGG
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC--------CCceEEEEecCcccccccccccCCCC
Confidence 889999999999 9999999999999999998764322 22222 33478999999 58
Q ss_pred ceeeeec-CcceEEeecchh
Q psy18074 140 RRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 140 ~~l~~~~-~~~~~i~~~~~~ 158 (197)
..++++. ++.+.+|+....
T Consensus 171 ~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 171 RKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp CCEEEEETTSCEEEEEEETT
T ss_pred CEEEEEECCCeEEEEeccCC
Confidence 8888665 558999998765
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=7e-21 Score=144.81 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=115.1
Q ss_pred CccEEE----EEcCCCcEEEEEccCC-----C--Cc---eeecccCCCCeEEEEECCC-CCEEEEEeCCCcEEEEECCCC
Q psy18074 2 EAFVFT----AANEDFNLYSYDIRQL-----N--SP---LNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~----~~~~d~~i~i~d~~~~-----~--~~---~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~v~i~d~~~~ 66 (197)
+|++|+ +|+.|+.|++||+... . .+ ...+.+|...|.+++|+|+ +..|++++.||.|++||++++
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 678888 7889999999998642 1 11 3556678899999999998 789999999999999999988
Q ss_pred cccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec
Q psy18074 67 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 67 ~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
...... .+|...|.+++|+|+|++|++|+.||.|++||++ ++....+..+... -..+...+.+++|++++.++++..
T Consensus 183 ~~~~~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~-~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 183 VKVCAT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY-ESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp EEEEEE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC-CTTSCEEEEEEEEEETTEEEEEEE
T ss_pred cceeec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc-CCCCceeEEEEEEecCceEEEEEc
Confidence 554332 4577899999999999999999999999999998 5544444332210 001122478999999988886322
Q ss_pred --Cc------ceEEeecchh
Q psy18074 147 --QV------PRHIYNAQAE 158 (197)
Q Consensus 147 --~~------~~~i~~~~~~ 158 (197)
++ .+.+|++.+.
T Consensus 260 ~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 260 AADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ETTCCSSSCCEEEEEECCCT
T ss_pred cCCCccCCCCceEEEEeccC
Confidence 11 2678888643
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.86 E-value=3.6e-20 Score=156.35 Aligned_cols=157 Identities=14% Similarity=0.209 Sum_probs=130.8
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
.++.++++|+.|+.|++||+.+ +..+..+.+|...|.+++|+| ++..+++++.|+.|++||+.++.....+ .+|..
T Consensus 667 ~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-~~h~~ 744 (1249)
T 3sfz_A 667 SDDSYIATCSADKKVKIWDSAT-GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-FGHTN 744 (1249)
T ss_dssp TTSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-CCCSS
T ss_pred cCCCEEEEEeCCCeEEEEECCC-CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-cCCCC
Confidence 3788999999999999999987 678888999999999999999 4568899999999999999999877665 56889
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc-----cccccccccceecccCcccceeeeecCcceEEe
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR-----QALDYSESLKQKYAHHPQIRRIARHRQVPRHIY 153 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~ 153 (197)
.|.+++|+|+++++++++.||.|++||+.+++....+..... .........+.+++|+|+|+.++++.++.+.+|
T Consensus 745 ~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~ 824 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEE
T ss_pred CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEE
Confidence 999999999999999999999999999998877665543221 011111235789999999999999888899999
Q ss_pred ecchhh
Q psy18074 154 NAQAEH 159 (197)
Q Consensus 154 ~~~~~~ 159 (197)
+.....
T Consensus 825 d~~~~~ 830 (1249)
T 3sfz_A 825 DIHTSG 830 (1249)
T ss_dssp ETTTCC
T ss_pred EecCCC
Confidence 986544
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.85 E-value=6.7e-20 Score=133.13 Aligned_cols=146 Identities=16% Similarity=0.239 Sum_probs=118.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCC---CceeecccCCCCeEEEEECCCCCEE---EEEeCCCcEEEEECCCCcccceeecc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREF---VAGGYDKSLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l---~~~~~d~~v~i~d~~~~~~~~~~~~~ 75 (197)
++.++++++.|+.|++||+++.. ........+.+.|.++.++|++..+ ++++.++.|++||.......... .
T Consensus 161 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~ 238 (318)
T 4ggc_A 161 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV--D 238 (318)
T ss_dssp TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE--E
T ss_pred CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc--c
Confidence 67899999999999999997532 2334456678899999999976643 35678899999999987765554 4
Q ss_pred cccceeEEEEccCCCEEEEEe--CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEE
Q psy18074 76 RMQHVTHTVWSLDNKFVISAS--DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHI 152 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i 152 (197)
+...+..++|+|++..+++++ .|+.|++||+.+++.+..+.+|... |.+++|+|++++|++++. +.+.|
T Consensus 239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~--------V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR--------VLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC--------EEEEEECTTSSCEEEEETTTEEEE
T ss_pred ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC--------EEEEEEcCCCCEEEEEecCCeEEE
Confidence 457899999999999887654 7999999999999999888776654 789999999999997665 57899
Q ss_pred eecch
Q psy18074 153 YNAQA 157 (197)
Q Consensus 153 ~~~~~ 157 (197)
|++..
T Consensus 311 Wd~~~ 315 (318)
T 4ggc_A 311 WRCFE 315 (318)
T ss_dssp ECCSC
T ss_pred EECCC
Confidence 99854
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.85 E-value=1.1e-19 Score=136.08 Aligned_cols=147 Identities=12% Similarity=0.180 Sum_probs=120.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeec-------------ccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVH-------------KDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------~~~~~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~ 67 (197)
++.+|++|+.||.|++||+... .....+ .+|...|.+++|+| ++..|++++.|+.|++||+.++.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 133 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENS-SRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ 133 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCC-SSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEEcCCCeEEEEECCCC-cccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc
Confidence 7899999999999999999863 333222 25899999999999 77899999999999999999988
Q ss_pred ccceeecccccceeEEEEccC---CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccce-ee
Q psy18074 68 SRDIYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRR-IA 143 (197)
Q Consensus 68 ~~~~~~~~~~~~v~~v~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 143 (197)
....+. +...+.+++|+|. +.++++++.++.|++||+.+++.+..+..+... |.+++|+|++.. ++
T Consensus 134 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~ll~ 203 (408)
T 4a11_B 134 TADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQE--------ILAVSWSPRYDYILA 203 (408)
T ss_dssp EEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSC--------EEEEEECSSCTTEEE
T ss_pred cceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCc--------EEEEEECCCCCcEEE
Confidence 776653 4578999999985 459999999999999999998888777655543 789999999984 65
Q ss_pred eec-CcceEEeecchhh
Q psy18074 144 RHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 144 ~~~-~~~~~i~~~~~~~ 159 (197)
++. ++.+.+|++....
T Consensus 204 ~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 204 TASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEETTSCEEEEETTCSS
T ss_pred EEcCCCcEEEEECCCCC
Confidence 554 5689999987543
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=1.6e-20 Score=137.81 Aligned_cols=143 Identities=8% Similarity=-0.031 Sum_probs=117.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCC--CceeecccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEC-CCCcccceeecc--
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLRLYLA-HQGHSRDIYHTK-- 75 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~-~~~~~~~~~~~~-- 75 (197)
++.+|++|+.|+.|++||+.... .....+..|...|.+++|+|++. .|++++.||.|++||+ .++..... ..
T Consensus 22 ~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~--~~~~ 99 (342)
T 1yfq_A 22 SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQAL--TNNE 99 (342)
T ss_dssp GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEEC--BSCC
T ss_pred CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEec--cccC
Confidence 67899999999999999998632 12455668999999999999999 9999999999999999 87765322 45
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCC---------CceeeeeccccccccccccccceecccCcccceeeeec
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA---------SEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
|...|.+++|+| +.++++++.|+.|++||+.+ ++.+..+. + ...+.+++|+|++ .++.+.
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~--------~~~v~~~~~~~~~-l~~~~~ 168 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-V--------KNKIFTMDTNSSR-LIVGMN 168 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-S--------CCCEEEEEECSSE-EEEEES
T ss_pred CCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-e--------CCceEEEEecCCc-EEEEeC
Confidence 889999999999 99999999999999999986 55444443 2 2347899999998 555566
Q ss_pred CcceEEeecch
Q psy18074 147 QVPRHIYNAQA 157 (197)
Q Consensus 147 ~~~~~i~~~~~ 157 (197)
+..+.+|++..
T Consensus 169 d~~i~i~d~~~ 179 (342)
T 1yfq_A 169 NSQVQWFRLPL 179 (342)
T ss_dssp TTEEEEEESSC
T ss_pred CCeEEEEECCc
Confidence 66899999876
No 115
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.85 E-value=4.2e-20 Score=145.24 Aligned_cols=150 Identities=7% Similarity=0.075 Sum_probs=123.5
Q ss_pred CccEEEEEcCCCcEEEEEccCC-------CCceeecccCCCCeEEEEECCCCCEEEEEeCC----CcEEEEECCCCcccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQL-------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHSRD 70 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~v~i~d~~~~~~~~ 70 (197)
++.+|++|+.|+.|++||+.+. ......+..|...|.+++|+|++..|++++.+ +.|++|| .+....
T Consensus 77 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~ 154 (615)
T 1pgu_A 77 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLG 154 (615)
T ss_dssp TCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEE
T ss_pred CCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcce
Confidence 7899999999999999999631 25566778899999999999999999999887 6888888 444444
Q ss_pred eeecccccceeEEEEccCCC-EEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcc-cceeeeec-C
Q psy18074 71 IYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQ-IRRIARHR-Q 147 (197)
Q Consensus 71 ~~~~~~~~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~-~ 147 (197)
.+ .+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+..+... ...+.+++|+|+ +++|+++. +
T Consensus 155 ~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 155 EV-SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ-----GSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp EC-CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT-----TCCEEEEEECSTTCCEEEEEETT
T ss_pred ee-ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCC-----CceEEEEEECCCCCCEEEEEeCC
Confidence 44 56889999999999998 7899999999999999999888877765540 013789999999 99998665 5
Q ss_pred cceEEeecchhh
Q psy18074 148 VPRHIYNAQAEH 159 (197)
Q Consensus 148 ~~~~i~~~~~~~ 159 (197)
+.+.+|++...+
T Consensus 229 g~i~vwd~~~~~ 240 (615)
T 1pgu_A 229 RKISCFDGKSGE 240 (615)
T ss_dssp CCEEEEETTTCC
T ss_pred CeEEEEECCCCC
Confidence 689999986543
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=4.6e-20 Score=140.17 Aligned_cols=143 Identities=15% Similarity=0.200 Sum_probs=115.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++|+.|+.|++||+++ +..+..+.+|...+.++.+ ++..+++|+.||.|++||++++..+..+ .+|...|.
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~v~ 340 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL-EGHEELVR 340 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEE-eCCcCcEE
Confidence 578899999999999999987 5778888999999999999 5789999999999999999999877766 56788999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCc---------eeeeeccccccccccccccceecccCcccceeeeec-CcceE
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASE---------KLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRH 151 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~ 151 (197)
+++| ++.++++|+.||.|++||+.++. .+..+..+.. .|.+++| ++.+|++++ ++.+.
T Consensus 341 ~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~--------~v~~l~~--~~~~l~s~s~Dg~i~ 408 (435)
T 1p22_A 341 CIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG--------RVFRLQF--DEFQIVSSSHDDTIL 408 (435)
T ss_dssp EEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS--------CCCCEEE--CSSCEEECCSSSEEE
T ss_pred EEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC--------CeEEEEe--CCCEEEEEeCCCEEE
Confidence 9998 78899999999999999997655 4445544443 4778888 677777666 56899
Q ss_pred EeecchhhH
Q psy18074 152 IYNAQAEHR 160 (197)
Q Consensus 152 i~~~~~~~~ 160 (197)
+|++.....
T Consensus 409 iwd~~~~~~ 417 (435)
T 1p22_A 409 IWDFLNDPA 417 (435)
T ss_dssp EEC------
T ss_pred EEECCCCCC
Confidence 999876544
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=2.6e-19 Score=136.33 Aligned_cols=149 Identities=13% Similarity=0.217 Sum_probs=120.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec--ccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT--KRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~--~~~~~ 79 (197)
++.++++|+.|+.|++||+++ +..+..+.+|...+.++.+ ++..+++++.||.|++||+.++.....+.. .|...
T Consensus 288 ~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 364 (445)
T 2ovr_B 288 DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 364 (445)
T ss_dssp CSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCC
Confidence 578899999999999999987 5778888889999998887 467999999999999999998887766532 37788
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCc-c----eEEee
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQV-P----RHIYN 154 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-~----~~i~~ 154 (197)
|.+++|+ ++++++++.||.|++||+.+++.+..+..... ..+...|.+++|+|++.++++++.+ . +.+|+
T Consensus 365 v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 365 VTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES---GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTT---GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred EEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecccc---CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 9999995 67999999999999999999988876632111 1123457899999999999977655 3 78888
Q ss_pred cchh
Q psy18074 155 AQAE 158 (197)
Q Consensus 155 ~~~~ 158 (197)
....
T Consensus 440 f~~~ 443 (445)
T 2ovr_B 440 FDVD 443 (445)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7643
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=1.7e-19 Score=137.01 Aligned_cols=142 Identities=12% Similarity=0.222 Sum_probs=117.0
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++++|+.||.|++||+.+ +.....+.+|.+.|.+++| ++..|++|+.||.|++||+.++.....+ ..|...|.
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~ 217 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNT-LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTL-IHHCEAVL 217 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSS-CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEE-CCCCSCEE
T ss_pred CCCEEEEEeCCCeEEEEeCCC-CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEE-cCCCCcEE
Confidence 678999999999999999987 5778888999999999999 7889999999999999999999877666 56788999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCcee---eeeccccccccccccccceecccCcccceeeeec-CcceEEeecch
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKL---GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQA 157 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~ 157 (197)
+++|++ .++++++.||.|++||+.++... ..+.++. ..|.+++| ++++++++. ++.+.+|+...
T Consensus 218 ~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 218 HLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR--------AAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCS--------SCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCC--------CcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 999974 58999999999999999887655 3333333 33677777 677777655 55789999865
Q ss_pred hh
Q psy18074 158 EH 159 (197)
Q Consensus 158 ~~ 159 (197)
.+
T Consensus 286 ~~ 287 (435)
T 1p22_A 286 CE 287 (435)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=7.2e-20 Score=134.32 Aligned_cols=154 Identities=11% Similarity=-0.003 Sum_probs=119.1
Q ss_pred ccEEEEEcCCCcEEEEEccCC--------CCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC-Cccc-cee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQL--------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-GHSR-DIY 72 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~-~~~~-~~~ 72 (197)
+.++++++.|+.|++||++.. ..++..+. |...+.+++|+|++ +++++.++.|++||+++ +... ...
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~ 188 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIE 188 (342)
T ss_dssp TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceee
Confidence 578999999999999998741 23445554 88999999999987 99999999999999998 5532 223
Q ss_pred ecccccceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCC------ceeeeeccccccc-cccccccceecccCcccceeee
Q psy18074 73 HTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS------EKLGYVNNKQRQA-LDYSESLKQKYAHHPQIRRIAR 144 (197)
Q Consensus 73 ~~~~~~~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~ 144 (197)
...|...+.+++|+| +++++++++.||.|++|++... +....+..+.... ...+...+.+++|+|++++|++
T Consensus 189 ~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 268 (342)
T 1yfq_A 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYT 268 (342)
T ss_dssp ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEE
T ss_pred ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEE
Confidence 355678899999999 9999999999999999999876 5555555543210 0011235789999999999987
Q ss_pred ec-CcceEEeecchhh
Q psy18074 145 HR-QVPRHIYNAQAEH 159 (197)
Q Consensus 145 ~~-~~~~~i~~~~~~~ 159 (197)
+. ++.+.+|+....+
T Consensus 269 ~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 269 AGSDGIISCWNLQTRK 284 (342)
T ss_dssp EETTSCEEEEETTTTE
T ss_pred ecCCceEEEEcCccHh
Confidence 66 4588999987554
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=2.1e-19 Score=136.78 Aligned_cols=141 Identities=17% Similarity=0.210 Sum_probs=118.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+|.++++|+.||.|++||+.+ +.....+.+|.+.|.++.|+ +..+++++.||.|++||+.+++....+ .+|...|.
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~ 203 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVR 203 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTT-CCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEE
T ss_pred cCCEEEEEECCCcEEEEECCC-CcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEE-CCCCCcEE
Confidence 578999999999999999987 57788899999999999996 679999999999999999999877665 56888999
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchh
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~ 158 (197)
+++|+ +..+++++.||.|++||+.+++.+..+..+... +.+++| ++.+++++. ++.+.+|+....
T Consensus 204 ~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~--------v~~~~~--~~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 204 CMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA--------VRCVQY--DGRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSC--------EEEEEE--CSSCEEEEETTSCEEEEEGGGT
T ss_pred EEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc--------EEEEEE--CCCEEEEEcCCCEEEEEECCCC
Confidence 99995 568999999999999999999888777665543 567777 666777555 558899987654
No 121
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=3e-19 Score=135.15 Aligned_cols=144 Identities=14% Similarity=0.190 Sum_probs=115.7
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeec--ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+++|++|. |++|++||..+ +.....+ .+|...|++++|+|+|.+|++|+.||.|++||+.+++.+..+ .+|...+
T Consensus 116 ~n~lAvgl-d~tV~lWd~~t-g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~-~~h~~~v 192 (420)
T 4gga_A 116 GNVLAVAL-DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-TSHSARV 192 (420)
T ss_dssp TSEEEEEE-TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCE
T ss_pred CCEEEEEe-CCEEEEEECCC-CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-eCCCCce
Confidence 45777775 89999999987 4555544 467788999999999999999999999999999999887766 6687888
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCce-eeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchh
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEK-LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~ 158 (197)
.++++ ++.++++++.|+.+.+||...... +..+.++.. .+..+.++|++++++++. ++.+.+|+....
T Consensus 193 ~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 193 GSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--------CEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccccc--------ceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 88776 467999999999999999886443 344444443 367899999999999765 458899998654
Q ss_pred h
Q psy18074 159 H 159 (197)
Q Consensus 159 ~ 159 (197)
+
T Consensus 263 ~ 263 (420)
T 4gga_A 263 E 263 (420)
T ss_dssp S
T ss_pred c
Confidence 3
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.82 E-value=1.1e-18 Score=130.45 Aligned_cols=144 Identities=16% Similarity=0.144 Sum_probs=115.7
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++++++.|+.|++||+.+ ++....+..| ..+.+++|+|++..+ ++++.++.|++||+.+++....+..+ ..+.
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~--~~v~ 77 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTS-NKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG--SSPQ 77 (391)
T ss_dssp EEEEEEETTTTEEEEEETTT-TEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS--SSEE
T ss_pred CEEEEEcCCCCEEEEEECCC-CeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC--CCcc
Confidence 56889999999999999986 5666666655 558999999999977 56778999999999999887766333 4899
Q ss_pred EEEEccCCCEEE-EEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccccee-eeec-CcceEEeecchh
Q psy18074 82 HTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI-ARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 82 ~v~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~-~~~~~i~~~~~~ 158 (197)
+++|+|++++++ +++.++.|++||+.+++.+..+..+.. +.+++|+|+++.+ +++. +..+.+|+....
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~---------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS---------PLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS---------EEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC---------cceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 999999999886 555679999999999888776654432 5789999999977 4554 558899998654
Q ss_pred h
Q psy18074 159 H 159 (197)
Q Consensus 159 ~ 159 (197)
+
T Consensus 149 ~ 149 (391)
T 1l0q_A 149 A 149 (391)
T ss_dssp E
T ss_pred c
Confidence 3
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.81 E-value=3.8e-18 Score=123.83 Aligned_cols=143 Identities=14% Similarity=0.163 Sum_probs=113.0
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeec--ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++||+|. |++|++||+.+ ++.+..+ .+|...|.+++|+|++++|++|+.|+.|++|++.+++.+..+ .+|...+.
T Consensus 37 ~~lAvg~-D~tV~iWd~~t-g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~-~~h~~~~~ 113 (318)
T 4ggc_A 37 NVLAVAL-DNSVYLWSASS-GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-TSHSARVG 113 (318)
T ss_dssp SEEEEEE-TTEEEEEETTT-CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEE
T ss_pred CEEEEEe-CCEEEEEECCC-CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe-cCccceEE
Confidence 4677764 89999999987 5655554 467788999999999999999999999999999999887766 56766666
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCce-eeeeccccccccccccccceecccCcccceeeeecC-cceEEeecchhh
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEK-LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQAEH 159 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~~~~ 159 (197)
++ ++++..+++++.++.+.+|+...... +..+.++.. .+..+.+++++++++++.. ..+.+|++...+
T Consensus 114 ~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 114 SL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--------CEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred Ee--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccC--------ceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 54 55678999999999999999886543 334444443 3678899999999987664 588999987554
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=8.3e-19 Score=127.68 Aligned_cols=151 Identities=9% Similarity=0.039 Sum_probs=111.5
Q ss_pred CccEEEEEc--CCCcEEEEEccCCCCceeecccCCCCeEEEEECC---CCCEEEEEeCCCcEEEEECCCCcccceeeccc
Q psy18074 2 EAFVFTAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP---TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp---~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~ 76 (197)
+++++.+++ .|+.|++|++...++....+..|...+..++|+| ++..|++++.|++|++||+.+|+++..+..+|
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 355566643 5999999999654677778888999999999999 77999999999999999999999888874332
Q ss_pred --ccceeEEEEccCCCEE------------EEEeCCCcEEEEEcCCCceeeeec-----cccccccccccccceecccCc
Q psy18074 77 --MQHVTHTVWSLDNKFV------------ISASDEMNLRVWKAHASEKLGYVN-----NKQRQALDYSESLKQKYAHHP 137 (197)
Q Consensus 77 --~~~v~~v~~~~~~~~l------------~~~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~ 137 (197)
...+.+++|+|+|.++ ++|+.|++|++||..+++.+..+. ++.. ..+..+.
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~----------~~lsg~~ 293 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAG----------RFLEGDV 293 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCC----------CEEEEEE
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcc----------eeEcccc
Confidence 2467788999999886 567889999999999998776542 2211 1222333
Q ss_pred ccceeeeec-CcceEEeecchhhHHH
Q psy18074 138 QIRRIARHR-QVPRHIYNAQAEHRAI 162 (197)
Q Consensus 138 ~~~~l~~~~-~~~~~i~~~~~~~~~~ 162 (197)
++.++++++ +..+.||++...+...
T Consensus 294 sg~~lASgS~DgTIkIWDl~tGk~l~ 319 (356)
T 2w18_A 294 KDHCAAAILTSGTIAIWDLLLGQCTA 319 (356)
T ss_dssp ETTEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 466788765 5689999998765443
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.81 E-value=1.1e-18 Score=132.02 Aligned_cols=146 Identities=9% Similarity=0.015 Sum_probs=119.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-----ecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-----VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-----~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~ 76 (197)
++.++++++.++.|++||+.+ ++... .+.+|.+.+.+++|+|++..+++++.|+.|++||+.++.....+ ..|
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~ 210 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINS-GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLT 210 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTT-CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECS
T ss_pred CCeEEEEeCCCCeEEEEECCC-CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCC
Confidence 567888898999999999986 44444 45678889999999999999999999999999999988876665 356
Q ss_pred ccceeEEEEccCCCEEE-EEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec---------
Q psy18074 77 MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR--------- 146 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--------- 146 (197)
...+.+++|+|++++++ +++.++.|++||+.+++.+..+..+.. +.+++|+|++++++++.
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGL---------PRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSE---------EEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCC---------ceEEEEcCCCCEEEEEECCCCccccC
Confidence 67899999999999885 555799999999999887776654332 57899999998887654
Q ss_pred CcceEEeecchh
Q psy18074 147 QVPRHIYNAQAE 158 (197)
Q Consensus 147 ~~~~~i~~~~~~ 158 (197)
++.+.+|+....
T Consensus 282 dg~i~~~d~~~~ 293 (433)
T 3bws_A 282 GGRLGIYSMDKE 293 (433)
T ss_dssp CEEEEEEETTTT
T ss_pred CCeEEEEECCCC
Confidence 457789998654
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=2.8e-19 Score=136.02 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=108.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCC---------Ccee-----ecccCCCCeEEEEECCCCCEEE----EEeCCCcEEEEEC
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN---------SPLN-----VHKDMTSAVTSVDYSPTGREFV----AGGYDKSLRLYLA 63 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~---------~~~~-----~~~~~~~~v~~~~~sp~~~~l~----~~~~d~~v~i~d~ 63 (197)
++.++++++.++ +.+|+..... .... ....+...|.+++|+|++.+|+ +++.|+.|++||+
T Consensus 47 ~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~ 125 (434)
T 2oit_A 47 KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDV 125 (434)
T ss_dssp TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEH
T ss_pred CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEc
Confidence 456778888777 8888753110 0010 1113456799999999999999 7888999999998
Q ss_pred CCC--------ccc--ceeecccccceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeecccccccccccccccee
Q psy18074 64 HQG--------HSR--DIYHTKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQK 132 (197)
Q Consensus 64 ~~~--------~~~--~~~~~~~~~~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~ 132 (197)
.++ +.+ .....+|...|.+++|+|+ +.+|++++.||.|++||++++.......++. ..+.+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~--------~~v~~ 197 (434)
T 2oit_A 126 RTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST--------VAVTS 197 (434)
T ss_dssp HHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG--------GCEEE
T ss_pred cccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC--------CceeE
Confidence 754 111 1123457889999999998 8899999999999999999886554443332 33789
Q ss_pred cccCcccceeeeecC-cceEEeecc
Q psy18074 133 YAHHPQIRRIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 133 ~~~s~~~~~l~~~~~-~~~~i~~~~ 156 (197)
++|+|+|++|+++.. +.+.+|+..
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999999997664 588999986
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=1.2e-17 Score=124.86 Aligned_cols=145 Identities=11% Similarity=0.098 Sum_probs=114.3
Q ss_pred CccEE-EEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVF-TAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++..+ ++++.|+.|++||+.+ ++....+..+ ..+.+++|+|++..++. ++.++.|++||+.+++....+. +...
T Consensus 42 dg~~l~~~~~~d~~i~v~d~~~-~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~ 117 (391)
T 1l0q_A 42 DGTKVYVANAHSNDVSIIDTAT-NNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKS 117 (391)
T ss_dssp TSSEEEEEEGGGTEEEEEETTT-TEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSS
T ss_pred CCCEEEEECCCCCeEEEEECCC-CeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCC
Confidence 56654 7788899999999986 5666666544 48999999999998865 4567999999999988766653 3367
Q ss_pred eeEEEEccCCCEE-EEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccccee-eeec-CcceEEeecc
Q psy18074 80 VTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI-ARHR-QVPRHIYNAQ 156 (197)
Q Consensus 80 v~~v~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~-~~~~~i~~~~ 156 (197)
+.+++|+|+++++ ++++.++.|++||+.+++.+..+..+.. +..++|+|+++++ +++. +..+.+|++.
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS---------PKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS---------EEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC---------cceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 8999999999987 6888899999999999888777655433 4789999999877 4544 4578999986
Q ss_pred hhh
Q psy18074 157 AEH 159 (197)
Q Consensus 157 ~~~ 159 (197)
..+
T Consensus 189 ~~~ 191 (391)
T 1l0q_A 189 TNS 191 (391)
T ss_dssp TTE
T ss_pred CCe
Confidence 543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.77 E-value=2.8e-17 Score=124.32 Aligned_cols=133 Identities=15% Similarity=0.139 Sum_probs=102.0
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCC---cEEEEECCCCcccceeecccccceeEEEEccCC
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK---SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN 89 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~---~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~ 89 (197)
+.|++||+.. .....+..|...+.+++|+|+|+.|++++.++ .|++||+.+++.... ..|...+.+++|+|||
T Consensus 159 ~~i~i~d~~g--~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l--~~~~~~~~~~~~spdg 234 (415)
T 2hqs_A 159 YELRVSDYDG--YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDG 234 (415)
T ss_dssp EEEEEEETTS--CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTS
T ss_pred ceEEEEcCCC--CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe--ecCCCcccCEEEcCCC
Confidence 6899999973 45677778899999999999999999998775 999999998876543 3456789999999999
Q ss_pred CEEE-EEeCCCc--EEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC--c--ceEEeecchh
Q psy18074 90 KFVI-SASDEMN--LRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ--V--PRHIYNAQAE 158 (197)
Q Consensus 90 ~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~--~~~i~~~~~~ 158 (197)
++|+ +++.++. |++||+.+++. ..+..+.. .+.+++|+|||++|+..+. . .+.+|++...
T Consensus 235 ~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~--------~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 235 SKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS--------NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS--------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC--------cccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 9888 6666554 99999988765 33433332 3678999999998886553 2 3455565443
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=2.1e-17 Score=125.04 Aligned_cols=145 Identities=8% Similarity=0.017 Sum_probs=116.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++++.|+.|++||+.. ......+..|...+.+++|+|++..+++ ++.++.|++||+.++.....+.. ...+
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~ 256 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKT-LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLP 256 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTT-CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEE
T ss_pred CCEEEEEECCCCEEEEEECCC-ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCc
Confidence 578999999999999999986 5667777788899999999999998855 45799999999998887665532 3569
Q ss_pred eEEEEccCCCEEEEEe--------CCCcEEEEEcCCCceeeeeccccccccccccccceecccCccccee-ee-ecCcce
Q psy18074 81 THTVWSLDNKFVISAS--------DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI-AR-HRQVPR 150 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~--------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~-~~~~~~ 150 (197)
.+++|+|+++++++++ .|+.|++||+.+++.+..+.... .+..++|+|+++.+ ++ ..+..+
T Consensus 257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~g~~l~~~~~~~~~v 327 (433)
T 3bws_A 257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---------NKRHIVSGNTENKIYVSDMCCSKI 327 (433)
T ss_dssp EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---------CEEEEEECSSTTEEEEEETTTTEE
T ss_pred eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---------CcceEEECCCCCEEEEEecCCCEE
Confidence 9999999999998877 58899999999887766542221 25789999999755 44 445688
Q ss_pred EEeecchh
Q psy18074 151 HIYNAQAE 158 (197)
Q Consensus 151 ~i~~~~~~ 158 (197)
.+|+....
T Consensus 328 ~v~d~~~~ 335 (433)
T 3bws_A 328 EVYDLKEK 335 (433)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 99998754
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=1.3e-16 Score=120.73 Aligned_cols=146 Identities=11% Similarity=0.046 Sum_probs=108.9
Q ss_pred CCccEEEEEcCCC---cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEE-EEeCCC--cEEEEECCCCcccceeec
Q psy18074 1 MEAFVFTAANEDF---NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDK--SLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 1 ~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~--~v~i~d~~~~~~~~~~~~ 74 (197)
.||..|+.++.++ .|++||+.+ ++. ..+..|.+.+.+++|+|+|+.|+ +++.++ .|++||+.++..... .
T Consensus 188 pdg~~la~~s~~~~~~~i~~~d~~t-g~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l--~ 263 (415)
T 2hqs_A 188 PDGSKLAYVTFESGRSALVIQTLAN-GAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV--T 263 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTT-CCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC--C
T ss_pred CCCCEEEEEEecCCCcEEEEEECCC-CcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC--c
Confidence 3788899988775 899999986 343 45667888999999999999887 566555 499999998876333 4
Q ss_pred ccccceeEEEEccCCCEEEEEeC-CC--cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC----
Q psy18074 75 KRMQHVTHTVWSLDNKFVISASD-EM--NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ---- 147 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---- 147 (197)
.|...+.+++|+|+|++|++++. ++ .|.+||+.+++.. .+..+. ..+..++|+|+|++|+.+..
T Consensus 264 ~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~--------~~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 264 DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEG--------SQNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSS--------SEEEEEEECTTSSEEEEEEECSSC
T ss_pred CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCC--------CcccCeEECCCCCEEEEEECcCCc
Confidence 56678999999999999987775 44 6888898877643 222222 22578999999999986543
Q ss_pred cceEEeecchhh
Q psy18074 148 VPRHIYNAQAEH 159 (197)
Q Consensus 148 ~~~~i~~~~~~~ 159 (197)
..+.+|++...+
T Consensus 335 ~~i~~~d~~~~~ 346 (415)
T 2hqs_A 335 QHIAKQDLATGG 346 (415)
T ss_dssp EEEEEEETTTCC
T ss_pred eEEEEEECCCCC
Confidence 367888876543
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=8.7e-16 Score=123.64 Aligned_cols=141 Identities=19% Similarity=0.159 Sum_probs=102.2
Q ss_pred CCccEEEEEcC-CC-----cEEEEEccCCCCceeecccCC------------------------CCeEEEEECCCCCEEE
Q psy18074 1 MEAFVFTAANE-DF-----NLYSYDIRQLNSPLNVHKDMT------------------------SAVTSVDYSPTGREFV 50 (197)
Q Consensus 1 ~~~~~l~~~~~-d~-----~i~i~d~~~~~~~~~~~~~~~------------------------~~v~~~~~sp~~~~l~ 50 (197)
.||..|++++. |+ .|++||+.+ +.....+..+. ..+.+++|||||+.|+
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~ 124 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL 124 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTT-CCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCC-CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence 47899999887 87 899999986 44444443322 2378999999999999
Q ss_pred EEeCCCcEEEEECCCC---cccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccc-
Q psy18074 51 AGGYDKSLRLYLAHQG---HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYS- 126 (197)
Q Consensus 51 ~~~~d~~v~i~d~~~~---~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~- 126 (197)
+++. +.|++||+.++ ..... ..+...+..++|+|||++|++++ ++.|++||+.+++................
T Consensus 125 ~~~~-~~i~~~d~~~~~~~~~~~l--~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~ 200 (741)
T 2ecf_A 125 FPLG-GELYLYDLKQEGKAAVRQL--THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIA 200 (741)
T ss_dssp EEET-TEEEEEESSSCSTTSCCBC--CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCC
T ss_pred EEeC-CcEEEEECCCCCcceEEEc--ccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceecccc
Confidence 9886 99999999988 44333 34557899999999999999887 46899999998776544333222111100
Q ss_pred -------cccceecccCcccceeeeec
Q psy18074 127 -------ESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 127 -------~~~v~~~~~s~~~~~l~~~~ 146 (197)
...+..++|||||++|+...
T Consensus 201 ~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 201 EFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp CHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred ceeeeeccccccceEECCCCCEEEEEE
Confidence 01146799999999998654
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.68 E-value=2.4e-16 Score=126.52 Aligned_cols=142 Identities=8% Similarity=0.029 Sum_probs=102.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCC---CeEEEEECCCCCEEEEEeCC---------CcEEEEECCCCccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS---AVTSVDYSPTGREFVAGGYD---------KSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~d---------~~v~i~d~~~~~~~ 69 (197)
||.++++ +.|+.|++||+.+ ++....+..|.. .+.+++|||||++|++++.+ +.+++||+.++...
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~-g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 104 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVET-NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ 104 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGG-CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE
T ss_pred CCcEEEE-eCCCCEEEEECCC-CcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE
Confidence 6776665 6789999999987 455566655554 48999999999999998764 78889999988762
Q ss_pred cee-ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccc-ccccc---------ccceecccCcc
Q psy18074 70 DIY-HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQA-LDYSE---------SLKQKYAHHPQ 138 (197)
Q Consensus 70 ~~~-~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~---------~~v~~~~~s~~ 138 (197)
... ...|...+..++|+|||++|++++. +.|++||+.+++.......+.... +.... ..+..++||||
T Consensus 105 ~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 105 SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 221 1233345889999999999998876 789999999887765544332211 11111 12368999999
Q ss_pred cceeeeec
Q psy18074 139 IRRIARHR 146 (197)
Q Consensus 139 ~~~l~~~~ 146 (197)
|++|+...
T Consensus 184 g~~la~~~ 191 (723)
T 1xfd_A 184 GTRLAYAA 191 (723)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 99998654
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.67 E-value=4.5e-15 Score=115.84 Aligned_cols=153 Identities=10% Similarity=0.026 Sum_probs=116.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEEC--CCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA--HQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~--~~~~~~~~~~~~~~~~ 79 (197)
++.++++++.|+.|.+||..+ ++.+..+..+.. +..++|+|+|++|++++.|+.|.+||+ .++..+..+. +...
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t-~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~ 223 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDS-KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIE 223 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSE
T ss_pred CCEEEEEEcCCCeEEEEECCC-ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCC
Confidence 567899999999999999987 567777763333 889999999999999999999999999 7777766653 3367
Q ss_pred eeEEEEcc----CCCEEEEEe-CCCcEEEEEcCCCceeeeecccccc--ccccc-cccceecccCcccceee-eec-Ccc
Q psy18074 80 VTHTVWSL----DNKFVISAS-DEMNLRVWKAHASEKLGYVNNKQRQ--ALDYS-ESLKQKYAHHPQIRRIA-RHR-QVP 149 (197)
Q Consensus 80 v~~v~~~~----~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~s~~~~~l~-~~~-~~~ 149 (197)
+..++|+| +|+++++++ .++.|.+||..+++.+..+...... ...++ ...+..+.++|++..++ +.. ++.
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~ 303 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 303 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCe
Confidence 89999999 999999887 4899999999999988877543210 00111 22467889999765544 433 346
Q ss_pred eEEeecchh
Q psy18074 150 RHIYNAQAE 158 (197)
Q Consensus 150 ~~i~~~~~~ 158 (197)
+.+|+....
T Consensus 304 i~vvd~~~~ 312 (543)
T 1nir_A 304 VLLVNYKDI 312 (543)
T ss_dssp EEEEECTTS
T ss_pred EEEEEecCC
Confidence 788887653
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=5.9e-15 Score=107.84 Aligned_cols=143 Identities=9% Similarity=0.018 Sum_probs=106.5
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEECCCCcc-cceeecccccce
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHS-RDIYHTKRMQHV 80 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~~~~~-~~~~~~~~~~~v 80 (197)
+.++++++.++.|.+||+.+ ++....+..+...+ .++|+|+++.+++++. ++.|++||+.++.. .... ..+....
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~ 86 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDT-LEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-QEGQSSM 86 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTT-CCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-EECSSCC
T ss_pred CEEEEEecCCCeEEEEeCcc-cceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-ccCCCCc
Confidence 45688889999999999987 45566665555666 9999999997766655 88999999998876 4443 3333444
Q ss_pred eEEEEccCCCEEEEEeCCC---cEEEEEcCCCceeeeeccccccccccccccceecccCcccceee-eecC-cc-eEEee
Q psy18074 81 THTVWSLDNKFVISASDEM---NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIA-RHRQ-VP-RHIYN 154 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~-~~-~~i~~ 154 (197)
.+++|+|+|++++++..++ .|.+||+.+++.+..+..... ...++|+|+|++++ ++.. .. +.+|+
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---------~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---------AVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---------EEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---------ccceEECCCCCEEEEEecCCCceEEEEE
Confidence 4499999999999555553 899999999887776654332 37899999998665 4333 56 88888
Q ss_pred cch
Q psy18074 155 AQA 157 (197)
Q Consensus 155 ~~~ 157 (197)
+..
T Consensus 158 ~~~ 160 (331)
T 3u4y_A 158 IDA 160 (331)
T ss_dssp ECT
T ss_pred ECC
Confidence 764
No 135
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=125.62 Aligned_cols=140 Identities=11% Similarity=0.082 Sum_probs=98.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCC---CeEEEEECCCCCEEEEEeC---------CCcEEEEECCCCccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS---AVTSVDYSPTGREFVAGGY---------DKSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~---------d~~v~i~d~~~~~~~ 69 (197)
||.+++++ .|+.|++||+.+ +.....+..+.. .+.+++|||||++|++++. ++.|++||+.+++..
T Consensus 26 dg~~~~~~-~d~~i~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 26 GQEYLHQS-ADNNIVLYNIET-GQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSEEEEEC-TTSCEEEEESSS-CCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCeEEEEc-CCCCEEEEEcCC-CcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 56555555 689999999986 454444443322 4889999999999998775 789999999988762
Q ss_pred ceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc-ccccccccccc---------ceecccCccc
Q psy18074 70 DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK-QRQALDYSESL---------KQKYAHHPQI 139 (197)
Q Consensus 70 ~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~---------v~~~~~s~~~ 139 (197)
...... ..+..++|||||+.|+++. ++.|++||+.+++........ ...++.++... ...++|||||
T Consensus 104 ~~~~l~--~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG 180 (719)
T 1z68_A 104 RGNELP--RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG 180 (719)
T ss_dssp CSSCCC--SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS
T ss_pred cceecC--cccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC
Confidence 111111 4688999999999999876 789999999888765433222 11112121111 2589999999
Q ss_pred ceeeeec
Q psy18074 140 RRIARHR 146 (197)
Q Consensus 140 ~~l~~~~ 146 (197)
++|+.++
T Consensus 181 ~~la~~~ 187 (719)
T 1z68_A 181 KFLAYAE 187 (719)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 9999654
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.67 E-value=1.9e-15 Score=110.56 Aligned_cols=145 Identities=16% Similarity=0.136 Sum_probs=102.3
Q ss_pred ccEEEEEcCCCcEEEEEccCCC--CceeecccCCCCeEEEEECCCCCEEEEEeCC-CcEEEEECC--CCcccceeecccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-KSLRLYLAH--QGHSRDIYHTKRM 77 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~~v~i~d~~--~~~~~~~~~~~~~ 77 (197)
..++++++.|+.|++||+...+ ..... ..+...+.+++|+|+++.|++++.+ +.|.+|++. ++...........
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 4566666889999999996322 22222 3467788999999999998888876 899999997 5553322111222
Q ss_pred cceeEEEEccCCCEEEEEe-CCCcEEEEEcCC---CceeeeeccccccccccccccceecccCcccceeeee--cCcceE
Q psy18074 78 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA---SEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH--RQVPRH 151 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~~~~~ 151 (197)
..+..++|+|+++++++++ .++.|.+||+.. .+....+.... .+.+++|+|++++++.+ .+..+.
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---------GCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---------TBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---------CceEEEECCCCCEEEEecCCCCEEE
Confidence 4789999999999887665 488899999943 33333333222 25789999999877754 456889
Q ss_pred Eeecch
Q psy18074 152 IYNAQA 157 (197)
Q Consensus 152 i~~~~~ 157 (197)
+|++..
T Consensus 155 ~~d~~~ 160 (343)
T 1ri6_A 155 LFTVSD 160 (343)
T ss_dssp EEEECT
T ss_pred EEEecC
Confidence 999865
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=3.1e-15 Score=109.18 Aligned_cols=145 Identities=12% Similarity=0.013 Sum_probs=110.1
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCC--CeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccc----
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS--AVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKR---- 76 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~---- 76 (197)
.++++++.++.|.+||+.+ ++....+..... .+..++|+|++..++ +++.++.|.+||+.+++....+..++
T Consensus 2 ~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK-MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTT-TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCC-CcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 5788999999999999986 455555543221 578899999998765 55567899999999988766553332
Q ss_pred ccceeEEEEccCCCEEEEEe------------CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeee
Q psy18074 77 MQHVTHTVWSLDNKFVISAS------------DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIAR 144 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 144 (197)
...+..++|+|+|++++++. .++.|.+||+.+++.+..+..... +..++|+|+|++|+.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---------~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ---------ITMLAWARDGSKLYG 151 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS---------CCCEEECTTSSCEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC---------cceeEECCCCCEEEE
Confidence 22677899999999988775 579999999998887766544322 468899999998887
Q ss_pred ecCcceEEeecchhh
Q psy18074 145 HRQVPRHIYNAQAEH 159 (197)
Q Consensus 145 ~~~~~~~i~~~~~~~ 159 (197)
+ +..+.+|+....+
T Consensus 152 ~-~~~i~~~d~~~~~ 165 (337)
T 1pby_B 152 L-GRDLHVMDPEAGT 165 (337)
T ss_dssp E-SSSEEEEETTTTE
T ss_pred e-CCeEEEEECCCCc
Confidence 6 5678999986543
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=2.7e-15 Score=107.32 Aligned_cols=138 Identities=14% Similarity=0.085 Sum_probs=101.0
Q ss_pred CccEEE-EEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe-CCCcEEEEECC-CCcccceeeccccc
Q psy18074 2 EAFVFT-AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAH-QGHSRDIYHTKRMQ 78 (197)
Q Consensus 2 ~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~-~~~~~~~~~~~~~~ 78 (197)
|+..++ ++..++.+.+|+++........+..+...+.++.|+|++..+++++ .++.+.+|++. .+.....+ ..+..
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~ 217 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI-TDSAY 217 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC-CCCSE
T ss_pred CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE-ecCCc
Confidence 566665 7778899999987543445566677788999999999999887665 58889999876 33333333 34556
Q ss_pred ceeEEEEccCCCEEEEEeCC-----------CcEEEEEcCCCceeeeec--cccccccccccccceecccCcccceeeee
Q psy18074 79 HVTHTVWSLDNKFVISASDE-----------MNLRVWKAHASEKLGYVN--NKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
.+.+++|+|+|++|++++.+ +.|.+||+.+++...... .+. ..+..++|+|++++|+.+
T Consensus 218 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 218 GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ--------GTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST--------TTSCSCCBCTTSSEEEEE
T ss_pred ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC--------cccccceECCCCCEEEEE
Confidence 78999999999999877655 569999998776533222 222 236789999999998866
Q ss_pred cCc
Q psy18074 146 RQV 148 (197)
Q Consensus 146 ~~~ 148 (197)
...
T Consensus 290 ~~~ 292 (297)
T 2ojh_A 290 RYF 292 (297)
T ss_dssp EEC
T ss_pred Eec
Confidence 543
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.64 E-value=8.5e-15 Score=122.16 Aligned_cols=141 Identities=11% Similarity=0.081 Sum_probs=107.6
Q ss_pred CccEEEEEcCCCcEE-EEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLY-SYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
||..++.++.++.+. +||+.. +. ...+..|...+..++|+|+|+.|++++.++.|++||+.++...... ..|...+
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~-~~~~~~v 423 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE-RSREAMI 423 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSSCC
T ss_pred CCCeEEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec-cCCCCCc
Confidence 456777777777888 889875 33 3444577788999999999999999999999999999998765554 3566788
Q ss_pred eEEEEccCCCEEEEEeCC----------CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cc
Q psy18074 81 THTVWSLDNKFVISASDE----------MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VP 149 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~ 149 (197)
.+++|+|||++|++++.+ +.|++||+.+++ ...+..+... +..++|+|||++|+..+. ..
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~--------~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH--------DYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB--------EEEEEECTTSCEEEEEESCCC
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc--------cCCceEcCCCCEEEEEecccC
Confidence 999999999999877654 489999999876 4444443322 467899999999886554 34
Q ss_pred eEEee
Q psy18074 150 RHIYN 154 (197)
Q Consensus 150 ~~i~~ 154 (197)
..+|+
T Consensus 495 ~~~~~ 499 (1045)
T 1k32_A 495 DPSPD 499 (1045)
T ss_dssp CCEEC
T ss_pred CcCcc
Confidence 44444
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=2.3e-14 Score=105.33 Aligned_cols=147 Identities=7% Similarity=0.026 Sum_probs=111.2
Q ss_pred CccEEEEEc--CCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec---cc
Q psy18074 2 EAFVFTAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT---KR 76 (197)
Q Consensus 2 ~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~---~~ 76 (197)
++..+++++ .++.|.+||+.+ .+....+..+...+.+++|+|++..+++++.++.+.+||+.+++....+.. ++
T Consensus 151 dg~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 151 ATNTVYISGIGKESVIWVVDGGN-IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp TTTEEEEEEESSSCEEEEEETTT-TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS
T ss_pred CCCEEEEEecCCCceEEEEcCCC-CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC
Confidence 556555554 578899999986 455666654556688999999999999999999999999999887665533 23
Q ss_pred ccceeEEEEccCCCEEEEEe-CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceee-ee-cCcceEEe
Q psy18074 77 MQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIA-RH-RQVPRHIY 153 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~~~~i~ 153 (197)
...+..++|+|++++++.++ .++.|.+||+.+++.+..+..... ..++|+|+|+++. +. .++.+.+|
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES----------LAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC----------CCEEEETTTTEEEEEETTTTEEEEE
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC----------ceEEECCCCCEEEEEECCCCeEEEE
Confidence 45678899999999877655 458999999999888776654332 4688999998554 44 34578999
Q ss_pred ecchhh
Q psy18074 154 NAQAEH 159 (197)
Q Consensus 154 ~~~~~~ 159 (197)
+....+
T Consensus 300 d~~~~~ 305 (353)
T 3vgz_A 300 DAKSYK 305 (353)
T ss_dssp ETTTTE
T ss_pred ECCCCe
Confidence 876543
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.7e-14 Score=102.11 Aligned_cols=146 Identities=12% Similarity=0.171 Sum_probs=99.6
Q ss_pred CccEEEEEc--CCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECC--CCcccceeeccc
Q psy18074 2 EAFVFTAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAH--QGHSRDIYHTKR 76 (197)
Q Consensus 2 ~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~--~~~~~~~~~~~~ 76 (197)
|+.+|++++ .++...+|.+.........+..+ ..+..++|+|++..|+ +++.++.+.+|++. ++..... ..+
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~--~~~ 171 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL--THG 171 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC--CCS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc--ccC
Confidence 678888887 33455555554222334444443 4588999999999887 67788988888853 3433222 345
Q ss_pred ccceeEEEEccCCCEEEEEe-CCCcEEEEEcC-CCceeeeeccccccccccccccceecccCcccceeeeecC-------
Q psy18074 77 MQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH-ASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ------- 147 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------- 147 (197)
...+.+++|+|++++++.++ .++.+.+|++. .+.....+..+.. .+..++|+|+|++|+....
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY--------GDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE--------EEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc--------ccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 57899999999999888665 58899999886 4444444443332 3578999999998885543
Q ss_pred -----cceEEeecchh
Q psy18074 148 -----VPRHIYNAQAE 158 (197)
Q Consensus 148 -----~~~~i~~~~~~ 158 (197)
..+.+|++...
T Consensus 244 ~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGG 259 (297)
T ss_dssp CSSEEEEEEEEETTSC
T ss_pred cccCceEEEEEecCCC
Confidence 24788887554
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.62 E-value=1.1e-14 Score=106.77 Aligned_cols=149 Identities=9% Similarity=-0.097 Sum_probs=105.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCC-CCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccc---
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKR--- 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~--- 76 (197)
++.++++++.++.|++||+.+ ++....+..+. ..+..++|+|++..++ +...++.|++||+.+++....+...+
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS-DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT-TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCEEEEEeCCCCeEEEEECCC-CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 567899999999999999986 45555554332 2578899999998665 45578999999999887765553322
Q ss_pred --ccceeEEEEccCCCEEEEEeCC------------CcEEEEEcCCCceeeeeccccccccccccccceecccCccccee
Q psy18074 77 --MQHVTHTVWSLDNKFVISASDE------------MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 77 --~~~v~~v~~~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 142 (197)
...+..++|+|+|+++++++.+ +.|.+||+.+++.......... ...+.+++|+|+|+.+
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM------PRQVYLMRAADDGSLY 162 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC------CSSCCCEEECTTSCEE
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC------CCcccceeECCCCcEE
Confidence 2337889999999999988755 8999999987543322111100 0125788899999944
Q ss_pred eeecCcceEEeecchhh
Q psy18074 143 ARHRQVPRHIYNAQAEH 159 (197)
Q Consensus 143 ~~~~~~~~~i~~~~~~~ 159 (197)
+. . ..+.+|+....+
T Consensus 163 ~~-~-~~i~~~d~~~~~ 177 (349)
T 1jmx_B 163 VA-G-PDIYKMDVKTGK 177 (349)
T ss_dssp EE-S-SSEEEECTTTCC
T ss_pred Ec-c-CcEEEEeCCCCc
Confidence 43 2 348888876543
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.61 E-value=6.8e-15 Score=115.60 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=100.3
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC----CcEEEEECCCCcccceeecccccc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
.++++++.+ .+.+||+.+ +...... .+.. .++.|||||+.|++++.+ +.|++||+.++..... ..|...
T Consensus 124 ~~~~s~~~~-~~~l~d~~~-g~~~~l~-~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l--~~~~~~ 196 (582)
T 3o4h_A 124 VVFTGATED-RVALYALDG-GGLRELA-RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF--DSGEGS 196 (582)
T ss_dssp EEEEEECSS-CEEEEEEET-TEEEEEE-EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE--CCSSCE
T ss_pred EEEEecCCC-CceEEEccC-CcEEEee-cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe--ecCCCc
Confidence 345555544 556999986 3433333 3333 789999999999987766 7899999998876533 456678
Q ss_pred eeEEEEccCCCEEEEEeCCC--cEEEEEcCCCceeeeeccccccccccccccceecc--------cCcccceeeeec-Cc
Q psy18074 80 VTHTVWSLDNKFVISASDEM--NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYA--------HHPQIRRIARHR-QV 148 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~-~~ 148 (197)
+..++|+|||++|+++..++ .|++||+.+++.. .+..+... +..++ |+|||..++++. +.
T Consensus 197 ~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 197 FSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD--------FSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp EEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH--------HHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC--------hhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 89999999999999888888 8999999988776 44443332 35566 999997766554 45
Q ss_pred ceEEeec
Q psy18074 149 PRHIYNA 155 (197)
Q Consensus 149 ~~~i~~~ 155 (197)
...+|..
T Consensus 268 ~~~l~~~ 274 (582)
T 3o4h_A 268 RSAVFID 274 (582)
T ss_dssp EEEEEET
T ss_pred cEEEEEE
Confidence 7889987
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.61 E-value=8.5e-15 Score=117.54 Aligned_cols=153 Identities=8% Similarity=-0.028 Sum_probs=105.5
Q ss_pred CCccEEEEEcCC---------CcEEEEEccCCCCceeec---ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcc
Q psy18074 1 MEAFVFTAANED---------FNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 68 (197)
Q Consensus 1 ~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~ 68 (197)
.||++|++++.+ +.+++||+.+ +.. ..+ ..|...+..++|||||+.|++++. +.|++||+.++..
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~ 146 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPH-GDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA 146 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSS-CCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCC-Cce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce
Confidence 378888888764 6788999986 333 233 334445889999999999999885 7899999998876
Q ss_pred cceeeccccc-----------------ceeEEEEccCCCEEEEEeCCC--------------------------------
Q psy18074 69 RDIYHTKRMQ-----------------HVTHTVWSLDNKFVISASDEM-------------------------------- 99 (197)
Q Consensus 69 ~~~~~~~~~~-----------------~v~~v~~~~~~~~l~~~~~dg-------------------------------- 99 (197)
......++.. .+.+++|+|||++|++++.++
T Consensus 147 ~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 226 (723)
T 1xfd_A 147 IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP 226 (723)
T ss_dssp EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCC
Confidence 5544222111 237899999999999876442
Q ss_pred --cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-----cceEEeecchh
Q psy18074 100 --NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-----VPRHIYNAQAE 158 (197)
Q Consensus 100 --~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----~~~~i~~~~~~ 158 (197)
.|++||+.+++....+..+.. +..+...+..++|||||++++.... ..+.+|++...
T Consensus 227 ~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 227 SISLHVIGLNGPTHDLEMMPPDD--PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEEEESSSSCCCEECCCCCC--GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeEEEEEECCCCceeEEeeCCcc--CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 789999988775444443210 1112234678999999998864321 24677876544
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.61 E-value=7.2e-14 Score=109.06 Aligned_cols=149 Identities=11% Similarity=0.126 Sum_probs=112.6
Q ss_pred CCccEEEEEcCCCcEEEEEc--cCCCCceeecccCCCCeEEEEECC----CCCEEEEEeC-CCcEEEEECCCCcccceee
Q psy18074 1 MEAFVFTAANEDFNLYSYDI--RQLNSPLNVHKDMTSAVTSVDYSP----TGREFVAGGY-DKSLRLYLAHQGHSRDIYH 73 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~~~v~~~~~sp----~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~ 73 (197)
.||+++++++.|+.|.+||+ .+ .+.+..+. +...+..++|+| +|+++++++. ++.|.+||..+++++..+.
T Consensus 188 pdg~~l~v~~~d~~V~v~D~~~~t-~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 188 ASGRYLLVIGRDARIDMIDLWAKE-PTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp TTSCEEEEEETTSEEEEEETTSSS-CEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEECcCCC-CcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 37899999999999999999 55 45666665 455679999999 9999998874 8999999999988776653
Q ss_pred cc---------c-ccceeEEEEccCCCE-EEEEeCCCcEEEEEcCCCceee--eeccccccccccccccceecccCcccc
Q psy18074 74 TK---------R-MQHVTHTVWSLDNKF-VISASDEMNLRVWKAHASEKLG--YVNNKQRQALDYSESLKQKYAHHPQIR 140 (197)
Q Consensus 74 ~~---------~-~~~v~~v~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~ 140 (197)
.. | ...+..+.++|++.. +++...++.|.+||+.+.+.+. .+.. ...+..+.|+|+|+
T Consensus 266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~---------~~~~~~~~~spdg~ 336 (543)
T 1nir_A 266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA---------APFLHDGGWDSSHR 336 (543)
T ss_dssp CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC---------CSSCCCEEECTTSC
T ss_pred ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc---------CcCccCceECCCCC
Confidence 21 2 236889999998765 4577789999999998766543 2221 12257899999999
Q ss_pred eee-eec-CcceEEeecchhhH
Q psy18074 141 RIA-RHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 141 ~l~-~~~-~~~~~i~~~~~~~~ 160 (197)
++. ++. ++.+.+|+....+.
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEEEecCCCeEEEEECCCCeE
Confidence 765 433 45889999876543
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.60 E-value=8.7e-14 Score=102.26 Aligned_cols=151 Identities=5% Similarity=-0.041 Sum_probs=110.8
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCCCceeecccCCC---------CeEEEEECCCCCEEEEEe--CCCcEEEEECCCCccc
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLNSPLNVHKDMTS---------AVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---------~v~~~~~sp~~~~l~~~~--~d~~v~i~d~~~~~~~ 69 (197)
+|. +++++..++.|.+||+.+ ++....+..+.. .+.++.|+|++..+++++ .++.|++||..+++..
T Consensus 99 dg~~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~ 177 (353)
T 3vgz_A 99 TTQTLWFGNTVNSAVTAIDAKT-GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK 177 (353)
T ss_dssp TTTEEEEEETTTTEEEEEETTT-CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE
T ss_pred CCCEEEEEecCCCEEEEEeCCC-CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE
Confidence 555 566667789999999986 455555554332 268899999999887765 4788999999998876
Q ss_pred ceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-C-
Q psy18074 70 DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-Q- 147 (197)
Q Consensus 70 ~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~- 147 (197)
..+. .+...+.+++|+|+|+++++++.++.|.+||+.+++....+...... ....+..++|+|+++++.... .
T Consensus 178 ~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~ 252 (353)
T 3vgz_A 178 TAIQ-NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDG----KEHFFINISLDTARQRAFITDSKA 252 (353)
T ss_dssp EEEC-CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS----SCCCEEEEEEETTTTEEEEEESSS
T ss_pred EEec-CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC----CCcccceEEECCCCCEEEEEeCCC
Confidence 6653 13345789999999999999999999999999998877665542110 011246789999998766433 3
Q ss_pred cceEEeecchh
Q psy18074 148 VPRHIYNAQAE 158 (197)
Q Consensus 148 ~~~~i~~~~~~ 158 (197)
..+.+|+....
T Consensus 253 ~~v~~~d~~~~ 263 (353)
T 3vgz_A 253 AEVLVVDTRNG 263 (353)
T ss_dssp SEEEEEETTTC
T ss_pred CEEEEEECCCC
Confidence 57788887554
No 147
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=1.4e-14 Score=116.85 Aligned_cols=139 Identities=9% Similarity=0.016 Sum_probs=99.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCC-----eEEEEECCCCCEEEEEeCC---------CcEEEEECCCCc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSA-----VTSVDYSPTGREFVAGGYD---------KSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----v~~~~~sp~~~~l~~~~~d---------~~v~i~d~~~~~ 67 (197)
||.+++++ |+.|++||+.+ +.....+..|... ...+.|||||+.|+.++.+ +.+++||+.++.
T Consensus 27 dg~~~~~~--~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~ 103 (740)
T 4a5s_A 27 DHEYLYKQ--ENNILVFNAEY-GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ 103 (740)
T ss_dssp SSEEEEEE--TTEEEEEETTT-CCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred CCcEEEEc--CCcEEEEECCC-CceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc
Confidence 67888886 89999999987 4555555555432 2448899999999988765 667899999988
Q ss_pred ccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeec-cccccccccccc---------cceecccCc
Q psy18074 68 SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVN-NKQRQALDYSES---------LKQKYAHHP 137 (197)
Q Consensus 68 ~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~---------~v~~~~~s~ 137 (197)
.... ..+...+..++|||||+.|+.+. ++.|++|++.+++...... +.....+....+ ....+.|||
T Consensus 104 ~~~l--~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp 180 (740)
T 4a5s_A 104 LITE--ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP 180 (740)
T ss_dssp ECCS--SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT
T ss_pred EEEc--ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC
Confidence 6543 34557899999999999999875 6899999998877554222 222212222221 123588999
Q ss_pred ccceeeeec
Q psy18074 138 QIRRIARHR 146 (197)
Q Consensus 138 ~~~~l~~~~ 146 (197)
||++||...
T Consensus 181 Dg~~la~~~ 189 (740)
T 4a5s_A 181 NGTFLAYAQ 189 (740)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 999998643
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=1.2e-13 Score=100.70 Aligned_cols=143 Identities=9% Similarity=0.009 Sum_probs=104.2
Q ss_pred CccEEEEEc------------CCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Q psy18074 2 EAFVFTAAN------------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~ 69 (197)
||..+++++ .++.|.+||+.+ ......+.. ...+.+++|+|++.+++++ ++.|++||+.++...
T Consensus 92 dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 92 DGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLV 167 (337)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEE
T ss_pred CCCEEEEEecccccccccccccCceEEEEECCC-CcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEe
Confidence 677777775 578999999976 455555543 4567889999999988877 688999999876543
Q ss_pred ceeecc-----------------------------------------------------------------cccceeEEE
Q psy18074 70 DIYHTK-----------------------------------------------------------------RMQHVTHTV 84 (197)
Q Consensus 70 ~~~~~~-----------------------------------------------------------------~~~~v~~v~ 84 (197)
..+... +...+.+++
T Consensus 168 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 247 (337)
T 1pby_B 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA 247 (337)
T ss_dssp EEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE
T ss_pred eeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEE
Confidence 222110 112345689
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 85 WSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 85 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
|+|+|++++++ ++.|.+||+.+++.+..+..... +.+++|+|+|++|+.+. +..+.+|++...+
T Consensus 248 ~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 248 VNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHS---------YYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSC---------CCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCc---------eeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 99999999887 78999999998887766654322 47899999999777544 4578999986554
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=1.2e-13 Score=100.89 Aligned_cols=151 Identities=13% Similarity=0.049 Sum_probs=103.6
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCCCc-eeecccCCCCeEEEEECCCCCEEEEEeCCC---cEEEEECCCCcccceeeccc
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLNSP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDK---SLRLYLAHQGHSRDIYHTKR 76 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~---~v~i~d~~~~~~~~~~~~~~ 76 (197)
||. +++++..++.|++||+.+ +.. ...+..+..+..+++|+|++++++++..++ .|.+||+.+++....+..
T Consensus 50 dg~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-- 126 (331)
T 3u4y_A 50 DCSNVVVTSDFCQTLVQIETQL-EPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-- 126 (331)
T ss_dssp SSCEEEEEESTTCEEEEEECSS-SSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--
T ss_pred CCCEEEEEeCCCCeEEEEECCC-CceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--
Confidence 566 445555588999999986 454 666666666665599999999998555443 899999999887666533
Q ss_pred ccceeEEEEccCCCEEE-EEeCCCc-EEEEEcCCCceeeeeccccccccccccccceecccCcccceee-eec-CcceEE
Q psy18074 77 MQHVTHTVWSLDNKFVI-SASDEMN-LRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIA-RHR-QVPRHI 152 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~-~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~-~~~~~i 152 (197)
...+.+++|+|+|++++ +...++. +.+|++.....+.... . ..+ .....+..++|+|+|++++ ++. +..+.+
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~--~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-Q--EFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGI 202 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-E--EEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-C--ccc-cCCCCccceEECCCCCEEEEEeCCCCeEEE
Confidence 25678999999998665 4456688 9999987544332111 0 000 1112257899999998654 443 457899
Q ss_pred eecchhh
Q psy18074 153 YNAQAEH 159 (197)
Q Consensus 153 ~~~~~~~ 159 (197)
|+....+
T Consensus 203 ~d~~~~~ 209 (331)
T 3u4y_A 203 LETQNPE 209 (331)
T ss_dssp EECSSTT
T ss_pred EECCCCc
Confidence 9986544
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.58 E-value=2.8e-14 Score=119.09 Aligned_cols=143 Identities=11% Similarity=0.133 Sum_probs=112.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCC-CeEEEEECCCCCEEEEEeCCCcEE-EEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS-AVTSVDYSPTGREFVAGGYDKSLR-LYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~d~~v~-i~d~~~~~~~~~~~~~~~~~ 79 (197)
||..++.++ ++.|++|+... +. ...+..|.. .+..+.|+ +|..|++++.+..++ +|++..+...... .|...
T Consensus 307 dG~~la~~~-~~~i~~~~~~~-~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~--~~~~~ 380 (1045)
T 1k32_A 307 DGDLIAFVS-RGQAFIQDVSG-TY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE--ENLGN 380 (1045)
T ss_dssp GGGCEEEEE-TTEEEEECTTS-SB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC--CCCCS
T ss_pred CCCEEEEEE-cCEEEEEcCCC-Cc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec--CCccc
Confidence 677777776 78899999875 33 444666777 89999999 999999988888898 9999877654332 56678
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-----------c
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-----------V 148 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----------~ 148 (197)
+..++|+|||++|++++.++.|++||+.+++.......+.. .+..++|||||++|+.+.. .
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~--------~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~ 452 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA--------MITDFTISDNSRFIAYGFPLKHGETDGYVMQ 452 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS--------CCCCEEECTTSCEEEEEEEECSSTTCSCCEE
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC--------CccceEECCCCCeEEEEecCccccccCCCCC
Confidence 99999999999999999999999999998887665544333 2578999999999985543 2
Q ss_pred ceEEeecchh
Q psy18074 149 PRHIYNAQAE 158 (197)
Q Consensus 149 ~~~i~~~~~~ 158 (197)
.+.+|++...
T Consensus 453 ~i~l~d~~~g 462 (1045)
T 1k32_A 453 AIHVYDMEGR 462 (1045)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEECCCC
Confidence 6788987654
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=6.7e-14 Score=102.35 Aligned_cols=146 Identities=10% Similarity=0.145 Sum_probs=100.0
Q ss_pred CccEEEEEcCC-CcEEEEEccCC-CC--ceeecccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEECCCC---cccceee
Q psy18074 2 EAFVFTAANED-FNLYSYDIRQL-NS--PLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQG---HSRDIYH 73 (197)
Q Consensus 2 ~~~~l~~~~~d-~~i~i~d~~~~-~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~~~---~~~~~~~ 73 (197)
++.++++++.+ +.|.+|++... +. .+..+.. ...+..++|+|+++.+++++. ++.|.+||+..+ ......
T Consensus 48 dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~- 125 (343)
T 1ri6_A 48 DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV- 125 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-
T ss_pred CCCEEEEeecCCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-
Confidence 67777777665 89999999721 22 2333433 347889999999998876664 888999999533 233332
Q ss_pred cccccceeEEEEccCCCEEEEEe-CCCcEEEEEcCC-Cceeee----eccccccccccccccceecccCcccceee-ee-
Q psy18074 74 TKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA-SEKLGY----VNNKQRQALDYSESLKQKYAHHPQIRRIA-RH- 145 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~-~~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~- 145 (197)
.....+.+++|+|+++++++++ .++.|.+||+.+ ++.... ..... ...+..++|+|++++++ ++
T Consensus 126 -~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 126 -EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-------GAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp -CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-------TCCEEEEEECTTSSEEEEEET
T ss_pred -cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-------CCCcceEEECCCCCEEEEEeC
Confidence 2235688999999999888776 889999999987 543221 11111 12256899999999765 43
Q ss_pred cCcceEEeecch
Q psy18074 146 RQVPRHIYNAQA 157 (197)
Q Consensus 146 ~~~~~~i~~~~~ 157 (197)
.+..+.+|+...
T Consensus 198 ~~~~i~~~~~~~ 209 (343)
T 1ri6_A 198 LNSSVDVWELKD 209 (343)
T ss_dssp TTTEEEEEESSC
T ss_pred CCCEEEEEEecC
Confidence 345789999853
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.57 E-value=6e-14 Score=112.98 Aligned_cols=148 Identities=14% Similarity=0.088 Sum_probs=106.8
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCC--ceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
.||+.|++++. +.|++||+.. +. ....+..+...+..++|||||+.|++++ ++.|++||+.++........ +..
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~-~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~-~~~ 193 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQ-EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD-GST 193 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSS-CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC-CCS
T ss_pred CCCCEEEEEeC-CcEEEEECCC-CCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC-Ccc
Confidence 37888888876 8999999986 31 3455667778899999999999999887 46899999998776544322 212
Q ss_pred ----------------ceeEEEEccCCCEEEEEeCCC---------------------------------cEEEEEcCC-
Q psy18074 79 ----------------HVTHTVWSLDNKFVISASDEM---------------------------------NLRVWKAHA- 108 (197)
Q Consensus 79 ----------------~v~~v~~~~~~~~l~~~~~dg---------------------------------~i~vwd~~~- 108 (197)
.+..++|+|||++|++++.|+ .|.+||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 147899999999999887654 788999987
Q ss_pred CceeeeeccccccccccccccceecccCcccceeeeec------CcceEEeecchhh
Q psy18074 109 SEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR------QVPRHIYNAQAEH 159 (197)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~~~~~i~~~~~~~ 159 (197)
++........ .+...+..++| |||++|+... +..+.+|++...+
T Consensus 274 ~~~~~~~~~~------~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 274 AQTQWIDLGK------EQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp CCCEEECCCS------CSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred CceEEecCCC------CcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 7654433220 11233678999 9999998443 2356778775543
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.57 E-value=3.1e-14 Score=114.10 Aligned_cols=137 Identities=12% Similarity=0.182 Sum_probs=98.9
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC-----Ccccceeecccccc-------
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-----GHSRDIYHTKRMQH------- 79 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~-----~~~~~~~~~~~~~~------- 79 (197)
++.|++||+.+ +. ...+..+...+.+++|||+|+.|+++ .++.|++|++.+ +........++ ..
T Consensus 100 ~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~-~~~~~g~~~ 175 (706)
T 2z3z_A 100 QGGLVGFDMLA-RK-VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGT-ETLVYGQAV 175 (706)
T ss_dssp TTEEEEEETTT-TE-EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCB-TTEEESSCC
T ss_pred CCEEEEEECCC-Cc-eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCC-CCeEcccch
Confidence 58999999975 33 34445567778899999999999985 679999999988 76554432222 22
Q ss_pred -------eeEEEEccCCCEEEEEe---------------------------------CCCcEEEEEcCCCceeeeecccc
Q psy18074 80 -------VTHTVWSLDNKFVISAS---------------------------------DEMNLRVWKAHASEKLGYVNNKQ 119 (197)
Q Consensus 80 -------v~~v~~~~~~~~l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~ 119 (197)
+.+++|+|||++|++++ .+..|.+||+.+++.........
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 48899999999999886 44679999999877544332211
Q ss_pred ccccccccccceecccCcccceeeeec-Cc-----ceEEeecchh
Q psy18074 120 RQALDYSESLKQKYAHHPQIRRIARHR-QV-----PRHIYNAQAE 158 (197)
Q Consensus 120 ~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~-----~~~i~~~~~~ 158 (197)
+...+..++|+|||++|+... +. .+.+|+....
T Consensus 256 ------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 256 ------KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp ------TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred ------CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 122367899999999888643 22 5678887654
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=116.10 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=99.7
Q ss_pred CCccEEEEEcC---------CCcEEEEEccCCCCce--eecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Q psy18074 1 MEAFVFTAANE---------DFNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR 69 (197)
Q Consensus 1 ~~~~~l~~~~~---------d~~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~ 69 (197)
.||++|+.++. ++.|++||+.+ +... ..+ ...+..++|||||+.|+++. ++.|++|++.++...
T Consensus 69 pDg~~la~~~~~~~~~~~s~~~~i~~~d~~~-g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 69 PDRQFVYLESDYSKLWRYSYTATYYIYDLSN-GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred CCCCeEEEEecCceeEEeecceEEEEEECCC-Cccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcE
Confidence 37888888766 68999999986 3331 222 35688999999999999886 789999999887765
Q ss_pred ceeecccccce-----------------eEEEEccCCCEEEEEeCCC---------------------------------
Q psy18074 70 DIYHTKRMQHV-----------------THTVWSLDNKFVISASDEM--------------------------------- 99 (197)
Q Consensus 70 ~~~~~~~~~~v-----------------~~v~~~~~~~~l~~~~~dg--------------------------------- 99 (197)
.....++...+ .+++|+|||++|++++.|.
T Consensus 144 ~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~ 223 (719)
T 1z68_A 144 QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV 223 (719)
T ss_dssp ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence 43323322222 4899999999999876542
Q ss_pred -cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec--Cc---ceEEee
Q psy18074 100 -NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR--QV---PRHIYN 154 (197)
Q Consensus 100 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~---~~~i~~ 154 (197)
.|++||+.+++....+.......+..+...+..++||||++++++.. .. .+.+|+
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 78899998776420011001011222334478999999988776532 21 256777
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.56 E-value=7.1e-13 Score=98.08 Aligned_cols=146 Identities=11% Similarity=0.109 Sum_probs=97.6
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCCC------c------eeecccCCCCeEEEEECCCCCEEEEEe-CCCcEEEEECCCCc
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLNS------P------LNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~~------~------~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~~~~ 67 (197)
||+ +++++..++.|.+|++..... . ..........+..++|+|+|+++++++ .++.|.+|++.++.
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 676 445555688999999875332 1 111223345678999999999887776 68999999998775
Q ss_pred ccce--e--ecccccceeEEEEccCCCEEEEEeC--CCcEEEEEcC--CCc--eeeeeccccccccccccccceecccCc
Q psy18074 68 SRDI--Y--HTKRMQHVTHTVWSLDNKFVISASD--EMNLRVWKAH--ASE--KLGYVNNKQRQALDYSESLKQKYAHHP 137 (197)
Q Consensus 68 ~~~~--~--~~~~~~~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~--~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~ 137 (197)
.... . ...+...+..++|+|+|++|+++.. ++.|.+|++. ++. .+..+.. . ..+..++|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g--------~~~~~~~~sp 315 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-G--------IHPRNFIITP 315 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-S--------SCCCEEEECT
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-C--------CCCceEEECC
Confidence 4222 1 1122345689999999999876655 4889999986 344 2222222 1 1257899999
Q ss_pred ccceeeeec--CcceEEeecc
Q psy18074 138 QIRRIARHR--QVPRHIYNAQ 156 (197)
Q Consensus 138 ~~~~l~~~~--~~~~~i~~~~ 156 (197)
||++|+.+. ++.+.+|...
T Consensus 316 dg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 316 NGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TSCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCCEEEEEEE
Confidence 999887554 3467886553
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.55 E-value=1.5e-13 Score=110.14 Aligned_cols=152 Identities=15% Similarity=0.150 Sum_probs=104.8
Q ss_pred CCccEEEEEcCCCcEEEEEccCC----CCceeecccCCCC--------------eEEEEECCCCCEEEEEe---------
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQL----NSPLNVHKDMTSA--------------VTSVDYSPTGREFVAGG--------- 53 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~~--------------v~~~~~sp~~~~l~~~~--------- 53 (197)
.||+.|+.+ .++.|++||+... +........+... +.++.|||||+.|++++
T Consensus 130 pdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~ 208 (706)
T 2z3z_A 130 PVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPT 208 (706)
T ss_dssp TTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCE
T ss_pred CCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceE
Confidence 378888885 5789999999851 2333333333332 48899999999999887
Q ss_pred ------------------------CCCcEEEEECCCCcccceee-cccccceeEEEEccCCCEEEEEeCCC-----cEEE
Q psy18074 54 ------------------------YDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEM-----NLRV 103 (197)
Q Consensus 54 ------------------------~d~~v~i~d~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~~~dg-----~i~v 103 (197)
.+..|++||+.++....... ..|...+.+++|+|||++|++++.++ .|.+
T Consensus 209 ~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~ 288 (706)
T 2z3z_A 209 PIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA 288 (706)
T ss_dssp EEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred EeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE
Confidence 44689999999887544432 24556789999999999999876664 8999
Q ss_pred EEcCCCceeeeeccccccccccccccceecccCc--ccceeeeecC-cceEEeecc
Q psy18074 104 WKAHASEKLGYVNNKQRQALDYSESLKQKYAHHP--QIRRIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 104 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~-~~~~i~~~~ 156 (197)
||+.+++....+........ ...+..++|+| ||++++++.. +...||...
T Consensus 289 ~d~~~g~~~~~~~~~~~~~~---~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 289 YDAETGRFVRTLFVETDKHY---VEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EETTTCCEEEEEEEEECSSC---CCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EECCCCceeeEEEEccCCCe---ECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 99998843333321111100 01235789999 9998886654 467888765
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.52 E-value=6.6e-14 Score=110.01 Aligned_cols=136 Identities=12% Similarity=0.110 Sum_probs=102.8
Q ss_pred CccEEEEEcCC----CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCC--cEEEEECCCCcccceeecc
Q psy18074 2 EAFVFTAANED----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--SLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 2 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~v~i~d~~~~~~~~~~~~~ 75 (197)
||+.+++++.+ ..|++||+.+ +. ...+..|.+.+..++|||||+.|+++..++ .|++||+.++... .+ ..
T Consensus 160 DG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-~~ 235 (582)
T 3o4h_A 160 RGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-EL 235 (582)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-CC
T ss_pred CCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-cC
Confidence 78889977766 7799999875 33 446678888899999999999999888888 8999999988766 33 45
Q ss_pred cccceeEEE--------EccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC
Q psy18074 76 RMQHVTHTV--------WSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ 147 (197)
Q Consensus 76 ~~~~v~~v~--------~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 147 (197)
|...+..++ |+|||.++++++.++.+++|++ ++...... ..+.+++|+ +++++++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~-----------~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 236 PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQ-----------GNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCS-----------SEEEEEEEE-TTEEEEEEEE
T ss_pred CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCC-----------CceEEEEec-CCEEEEEEcC
Confidence 555566666 9999988889999999999999 55443111 125788999 8888875433
Q ss_pred --cceEEeec
Q psy18074 148 --VPRHIYNA 155 (197)
Q Consensus 148 --~~~~i~~~ 155 (197)
.+-.+|..
T Consensus 302 ~~~p~~l~~~ 311 (582)
T 3o4h_A 302 LSTPPRIVSL 311 (582)
T ss_dssp TTEEEEEEEE
T ss_pred CCCCCeEEEE
Confidence 24445543
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.51 E-value=2.2e-13 Score=109.93 Aligned_cols=154 Identities=12% Similarity=0.098 Sum_probs=101.9
Q ss_pred CCccEEEEEcCC---------CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccce
Q psy18074 1 MEAFVFTAANED---------FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI 71 (197)
Q Consensus 1 ~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~ 71 (197)
.||+.++.++.+ +.+++||+.+ ++ ...+..+.+.+..++|||||+.|+.+. ++.|++|++.++.....
T Consensus 71 pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-~~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 71 PDGQFILLEYNYVKQWRHSYTASYDIYDLNK-RQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp TTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred CCCCEEEEEECCeeeEEEccceEEEEEECCC-Cc-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEE
Confidence 378888888765 5667999986 33 445667778899999999999999885 68999999988775543
Q ss_pred eecccccce-----------------eEEEEccCCCEEEEEeCCC-----------------------------------
Q psy18074 72 YHTKRMQHV-----------------THTVWSLDNKFVISASDEM----------------------------------- 99 (197)
Q Consensus 72 ~~~~~~~~v-----------------~~v~~~~~~~~l~~~~~dg----------------------------------- 99 (197)
...++...+ ..+.|||||++|+..+.|.
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~ 227 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT 227 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence 322322222 3589999999999764321
Q ss_pred -cEEEEEcCC---Cce--eeeeccccccccccccccceecccCcccceeeee--cC---cceEEeecchhh
Q psy18074 100 -NLRVWKAHA---SEK--LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH--RQ---VPRHIYNAQAEH 159 (197)
Q Consensus 100 -~i~vwd~~~---~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~---~~~~i~~~~~~~ 159 (197)
.|++||+.+ ++. ...+... ..+..+...+..++|+|||+.++.. .. ..+.+|++...+
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAP--ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCC--HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred eEEEEEECCCCCCCCcceEEEecCC--ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 477788776 531 1122211 0011123347889999999966632 11 246788876554
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=2.9e-12 Score=94.82 Aligned_cols=150 Identities=11% Similarity=0.089 Sum_probs=95.9
Q ss_pred CccEEEEE-cCCCcEEEEEccCCCCce--eec---cc--------CCCCeEEEEECCCCCEEEEEe-CCCcEEEEECCCC
Q psy18074 2 EAFVFTAA-NEDFNLYSYDIRQLNSPL--NVH---KD--------MTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~-~~d~~i~i~d~~~~~~~~--~~~---~~--------~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~~~ 66 (197)
++.+++++ ..++.|.+|++...+... ... .+ +...+.+++|+|+|+++++++ .++.+.+|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 35545554 468899999997432211 111 11 122358899999999776655 5789999988754
Q ss_pred cc------c------ceeecccccceeEEEEccCCCEEEEEe-CCCcEEEEEcCCCcee--eeeccccccccccccccce
Q psy18074 67 HS------R------DIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL--GYVNNKQRQALDYSESLKQ 131 (197)
Q Consensus 67 ~~------~------~~~~~~~~~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~ 131 (197)
.. + ......+...+..++|+|+|+++++++ .++.|.+|++.++... ..+..... +.....
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~-----~~~~~~ 262 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV-----NAQGSG 262 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS-----CCCCEE
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC-----CCCCcc
Confidence 31 1 112223345688999999999887666 6899999999876432 21211110 111246
Q ss_pred ecccCcccceee-eecC--cceEEeecc
Q psy18074 132 KYAHHPQIRRIA-RHRQ--VPRHIYNAQ 156 (197)
Q Consensus 132 ~~~~s~~~~~l~-~~~~--~~~~i~~~~ 156 (197)
.++|+|||++|+ +... ..+.+|++.
T Consensus 263 ~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 263 DIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred cEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 899999999885 4444 468999875
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=3.3e-12 Score=93.94 Aligned_cols=147 Identities=12% Similarity=0.138 Sum_probs=96.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCce--eecccC-CCCeEEEEECCCCCEEEE-EeCCCcEEEEECCC--Ccccce--ee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPL--NVHKDM-TSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQ--GHSRDI--YH 73 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~-~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~--~~~~~~--~~ 73 (197)
||++++++..++.|.+|++...+... ..+... ...+..++|+|+|+++++ ...++.+.+|++.. +..... ..
T Consensus 151 dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 230 (347)
T 3hfq_A 151 DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK 230 (347)
T ss_dssp TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE
T ss_pred CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee
Confidence 67777777788899999998323322 112222 236788999999996665 56788999999874 443211 11
Q ss_pred ccc-----ccceeEEEEccCCCEEE-EEeCCCcEEEEEcCCC---ceeeeeccccccccccccccceecccCcccceeee
Q psy18074 74 TKR-----MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHAS---EKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIAR 144 (197)
Q Consensus 74 ~~~-----~~~v~~v~~~~~~~~l~-~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 144 (197)
... ...+..++|+|+|++|+ +...++.|.+|++... ..+..+..+. ..+..++|+|||++|+.
T Consensus 231 ~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~--------~~~~~~~~spdg~~l~v 302 (347)
T 3hfq_A 231 TIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEG--------DFPRDFDLDPTEAFVVV 302 (347)
T ss_dssp SSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSS--------SCCCEEEECTTSSEEEE
T ss_pred ecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCC--------CCcCeEEECCCCCEEEE
Confidence 110 13588999999999875 5667899999998732 2222222211 22578999999998775
Q ss_pred ec-C-cceEEeecc
Q psy18074 145 HR-Q-VPRHIYNAQ 156 (197)
Q Consensus 145 ~~-~-~~~~i~~~~ 156 (197)
+. + +.+.+|...
T Consensus 303 ~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 303 VNQNTDNATLYARD 316 (347)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EEcCCCcEEEEEEe
Confidence 43 3 477888553
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.50 E-value=1.1e-12 Score=96.20 Aligned_cols=143 Identities=10% Similarity=0.025 Sum_probs=100.6
Q ss_pred CccEEEEEcCC------------CcEEEEEccCCC--CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Q psy18074 2 EAFVFTAANED------------FNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~d------------~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~ 67 (197)
||+++++++.+ +.|.+||+.+.. .....+. +...+.+++|+|+|. +++++ +.|++||+.+++
T Consensus 102 dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 102 DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGK 177 (349)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCC
T ss_pred CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCc
Confidence 67788887754 899999997521 2222332 344688999999999 65554 349999998876
Q ss_pred ccceeeccc-------------------------------------------------------------------ccce
Q psy18074 68 SRDIYHTKR-------------------------------------------------------------------MQHV 80 (197)
Q Consensus 68 ~~~~~~~~~-------------------------------------------------------------------~~~v 80 (197)
....+..+. ...+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
T 1jmx_B 178 YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELY 257 (349)
T ss_dssp EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCE
T ss_pred eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcc
Confidence 544332110 0134
Q ss_pred eEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchh
Q psy18074 81 THTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 81 ~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~ 158 (197)
..++|+| ++++++++ ++.|.+||+.+++.+..+..... +..++|+|+|++|+.+. +..+.+|+....
T Consensus 258 ~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---------~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 258 FTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT---------YYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC---------CCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred eeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC---------ccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 5778889 99999887 88999999999887766653322 46899999998777544 457899998654
Q ss_pred h
Q psy18074 159 H 159 (197)
Q Consensus 159 ~ 159 (197)
+
T Consensus 327 ~ 327 (349)
T 1jmx_B 327 E 327 (349)
T ss_dssp E
T ss_pred c
Confidence 3
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=2.6e-12 Score=94.51 Aligned_cols=154 Identities=12% Similarity=0.046 Sum_probs=97.9
Q ss_pred CccEEEEEc-CCCcEEEEEccCCCC--ceeeccc---------CCCCeEEEEECCCCCEEEEEeCCCcEEEEECC-CCcc
Q psy18074 2 EAFVFTAAN-EDFNLYSYDIRQLNS--PLNVHKD---------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-QGHS 68 (197)
Q Consensus 2 ~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~~~---------~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~-~~~~ 68 (197)
||.++++++ .++.|.+|++...+. .+..+.. ....+.+++|+|+|+.+++...++.|++|++. ++..
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE
Confidence 677677666 788999999963222 2222211 11248899999999955666678899999998 4543
Q ss_pred ccee--ecccccceeEEEEccCCCEEEE-EeCCCcEEEEEcCC--Ccee--eeeccccccccccccccceecccCcccce
Q psy18074 69 RDIY--HTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHA--SEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 69 ~~~~--~~~~~~~v~~v~~~~~~~~l~~-~~~dg~i~vwd~~~--~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 141 (197)
.... .......+..++|+|+|+++++ ...++.|.+|++.. ++.. ..+...... ......+..++|+|||++
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD--YTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT--CCSCCEEEEEEECTTSCE
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC--CCCCCcceeEEECCCCCE
Confidence 2221 1222246788999999997665 56788999999874 4321 111111100 000123578999999997
Q ss_pred ee-eec-CcceEEeecch
Q psy18074 142 IA-RHR-QVPRHIYNAQA 157 (197)
Q Consensus 142 l~-~~~-~~~~~i~~~~~ 157 (197)
|+ +.. +..+.+|++..
T Consensus 254 l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEEEEETTTEEEEEEECG
T ss_pred EEEEeCCCCEEEEEEECC
Confidence 74 443 45789999863
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.49 E-value=5.2e-12 Score=93.79 Aligned_cols=145 Identities=3% Similarity=-0.044 Sum_probs=94.6
Q ss_pred CCCcEEEEEccCCCCceeecc----cCCCCeEEEEECCCCCEEEEEe-CCCcEEEEECC-CCcccce--eec-cccccee
Q psy18074 11 EDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAH-QGHSRDI--YHT-KRMQHVT 81 (197)
Q Consensus 11 ~d~~i~i~d~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~-~~~~~~~--~~~-~~~~~v~ 81 (197)
.++.+.+|++...+.....+. .+...+.+++|+|+|+++++++ .++.|++|++. +++.... ... .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 688999999974344333332 2456789999999999888765 46799999998 6764322 211 1345689
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEEcC--CCceee---eeccccccccccccc------cceecc-cCcccceeeeec-C
Q psy18074 82 HTVWSLDNKFVISASD-EMNLRVWKAH--ASEKLG---YVNNKQRQALDYSES------LKQKYA-HHPQIRRIARHR-Q 147 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~-dg~i~vwd~~--~~~~~~---~~~~~~~~~~~~~~~------~v~~~~-~s~~~~~l~~~~-~ 147 (197)
.++|+|+|+++++++. ++.|.+|++. +++... .+..... .+..+.. .+..++ |+|||++|+.+. .
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP-GIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT-TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC-CcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 9999999999887664 7899999865 454321 1111000 0000011 357899 999999886433 2
Q ss_pred -c-----ceEEeecc
Q psy18074 148 -V-----PRHIYNAQ 156 (197)
Q Consensus 148 -~-----~~~i~~~~ 156 (197)
+ .+.+|++.
T Consensus 276 ~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 276 NKFELQGYIAGFKLR 290 (365)
T ss_dssp SSTTSCCEEEEEEEC
T ss_pred CCCCCCCeEEEEEEC
Confidence 2 57899875
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.48 E-value=4.2e-12 Score=91.01 Aligned_cols=146 Identities=8% Similarity=0.072 Sum_probs=105.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecc--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceee-ccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~ 78 (197)
+|+++++...++.|.+||.. +.....+. .+...+.+++++|+|..+++...++.|++|+.. +..+..+. .++..
T Consensus 131 ~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~ 207 (286)
T 1q7f_A 131 KGRIIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITN 207 (286)
T ss_dssp TSCEEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSC
T ss_pred CCCEEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccC
Confidence 67888888888899999975 34444443 344568999999999977777788999999975 44433331 22235
Q ss_pred ceeEEEEccCCCEEEEEeCCC-cEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecch
Q psy18074 79 HVTHTVWSLDNKFVISASDEM-NLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQA 157 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~ 157 (197)
.+..++++|+|+++++...++ .|.+||. +++.+..+..+... ..+..++++|+|+++++..+..+.+|+...
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~------~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKH------AQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCC------SCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCC------CcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 789999999999888887776 9999996 45555555433211 124689999999988887667889997643
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.43 E-value=4.3e-12 Score=100.99 Aligned_cols=154 Identities=14% Similarity=0.070 Sum_probs=101.4
Q ss_pred CCccEEEEEcCC----------CcEEEEEccCCC----Cceeecc-cCCCCeEEEEECCCCCEEEEEeCC--------Cc
Q psy18074 1 MEAFVFTAANED----------FNLYSYDIRQLN----SPLNVHK-DMTSAVTSVDYSPTGREFVAGGYD--------KS 57 (197)
Q Consensus 1 ~~~~~l~~~~~d----------~~i~i~d~~~~~----~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d--------~~ 57 (197)
.||+.|+.++.+ ..|++||+.... .....+. .+...+..+.|||||+.|+.++.+ ..
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~ 218 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTE 218 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEE
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcE
Confidence 378888887766 579999987510 3344555 556778889999999999877644 37
Q ss_pred EEEEECC-CCc--ccceeecccccceeEEEEccCCCEEEEEeCCC--cEEEEEcCCCceeeeeccccccccccccc-cce
Q psy18074 58 LRLYLAH-QGH--SRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--NLRVWKAHASEKLGYVNNKQRQALDYSES-LKQ 131 (197)
Q Consensus 58 v~i~d~~-~~~--~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~v~ 131 (197)
|++||+. ++. ....+...+...+..++|+|||++++++..++ .|.+||+.+++...... ........... .+.
T Consensus 219 i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 219 LKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMR 297 (662)
T ss_dssp EEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCC
T ss_pred EEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCc
Confidence 9999998 562 22233334457899999999999777887788 66677766665443322 22111000000 135
Q ss_pred ecccCcccceeeeecCcceEEeec
Q psy18074 132 KYAHHPQIRRIARHRQVPRHIYNA 155 (197)
Q Consensus 132 ~~~~s~~~~~l~~~~~~~~~i~~~ 155 (197)
.++|+|++++++++......||..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~ 321 (662)
T 3azo_A 298 WFAPLANGLIAVVHGKGAAVLGIL 321 (662)
T ss_dssp SEEECTTSCEEEEEBSSSCEEEEE
T ss_pred eEeEeCCCEEEEEEEcCccEEEEE
Confidence 678888888887655455677744
No 166
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=1.3e-11 Score=92.04 Aligned_cols=130 Identities=12% Similarity=0.026 Sum_probs=97.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
|+++|+++ .++.|++||++... .......|...+.++.+.+. .+++++.||.|.+||+.++.... +...|+
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs 166 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVT 166 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEE
T ss_pred CCCEEEEE-cCCcEEEEEchhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCce
Confidence 56788888 78999999998643 44455677778888887654 38889999999999999877542 235899
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCce--eeeeccccccccc---cccccceecccCcccceeee
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEK--LGYVNNKQRQALD---YSESLKQKYAHHPQIRRIAR 144 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~ 144 (197)
+++|+|+| ++.|..||.+++|+...++. ...+.... .+. .+...|.+++|.+++.++++
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp--~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPS--ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCH--HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCc--ccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999 67788999999999887664 44442211 111 12345889999999998884
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.39 E-value=1.8e-11 Score=91.16 Aligned_cols=135 Identities=10% Similarity=-0.013 Sum_probs=94.3
Q ss_pred CCccEEEEEcC-CCc--EEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccc
Q psy18074 1 MEAFVFTAANE-DFN--LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM 77 (197)
Q Consensus 1 ~~~~~l~~~~~-d~~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 77 (197)
.||..|+.++. ++. |++||+.. +........+...+..+.|+|+|+.|++++.++.|++||+.+++..... ..+.
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~-g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~-~~~~ 122 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNT-QVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY-QVPA 122 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTT-CEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-ECCT
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCC-CceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee-echh
Confidence 37887777776 664 88888875 4545555555555556789999999999999999999999998765544 2233
Q ss_pred cceeEEE--EccCCCEEEEE----------------------eCCCcEEEEEcCCCceeeeeccccccccccccccceec
Q psy18074 78 QHVTHTV--WSLDNKFVISA----------------------SDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKY 133 (197)
Q Consensus 78 ~~v~~v~--~~~~~~~l~~~----------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 133 (197)
..+.... ++|++++++.. ..+..|.+||+.+++...... ... .+..+
T Consensus 123 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~--------~~~~~ 193 (388)
T 3pe7_A 123 EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-ENQ--------WLGHP 193 (388)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ESS--------CEEEE
T ss_pred hcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec-CCc--------ccccc
Confidence 3343333 48999988742 234679999999886543332 211 25788
Q ss_pred ccCc-ccceeeeec
Q psy18074 134 AHHP-QIRRIARHR 146 (197)
Q Consensus 134 ~~s~-~~~~l~~~~ 146 (197)
+|+| ||+.|+...
T Consensus 194 ~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 194 IYRPYDDSTVAFCH 207 (388)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EECCCCCCEEEEEE
Confidence 9999 999988544
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.39 E-value=7.8e-12 Score=99.54 Aligned_cols=146 Identities=10% Similarity=-0.015 Sum_probs=94.0
Q ss_pred CccE-EEEEc-CCCcEEEEEccCCC-Cceeeccc-----CCCCeEEEEECCCCCEEEEEeCC----------CcEEEEEC
Q psy18074 2 EAFV-FTAAN-EDFNLYSYDIRQLN-SPLNVHKD-----MTSAVTSVDYSPTGREFVAGGYD----------KSLRLYLA 63 (197)
Q Consensus 2 ~~~~-l~~~~-~d~~i~i~d~~~~~-~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~~d----------~~v~i~d~ 63 (197)
||.. |+.++ .+..|+++++...+ .....+.. |...+..++|+|||+.|++++.+ ..|++||+
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 5665 55443 35667777664001 22344444 56678999999999999988766 58999999
Q ss_pred CC------CcccceeecccccceeEEEEccCCCEEEEEeCC--------CcEEEEEcC-CCc--eeeeeccccccccccc
Q psy18074 64 HQ------GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE--------MNLRVWKAH-ASE--KLGYVNNKQRQALDYS 126 (197)
Q Consensus 64 ~~------~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d--------g~i~vwd~~-~~~--~~~~~~~~~~~~~~~~ 126 (197)
.+ +... .+...+...+..++|+|||++|+.++.+ ..|.+||+. ++. ....+....
T Consensus 169 ~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~------- 240 (662)
T 3azo_A 169 DGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP------- 240 (662)
T ss_dssp TSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-------
T ss_pred CCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-------
Confidence 87 4433 2220334678889999999999876644 479999998 561 222332221
Q ss_pred cccceecccCcccceeeeecC-cceEEeec
Q psy18074 127 ESLKQKYAHHPQIRRIARHRQ-VPRHIYNA 155 (197)
Q Consensus 127 ~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~ 155 (197)
...+..+.|+|||++++++.. +...||..
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEE
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEE
Confidence 122578999999996665543 33345544
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=5.4e-11 Score=88.32 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=96.9
Q ss_pred CccEEEEEc-CCCcEEEEEcc-CCCCc--eeecc--cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEECC--CCcccc--
Q psy18074 2 EAFVFTAAN-EDFNLYSYDIR-QLNSP--LNVHK--DMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAH--QGHSRD-- 70 (197)
Q Consensus 2 ~~~~l~~~~-~d~~i~i~d~~-~~~~~--~~~~~--~~~~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~--~~~~~~-- 70 (197)
||++++++. .++.|++||+. + ++. +..+. .+...+..++|+|+|+++++++. ++.+.+|++. ++....
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~-g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLAS-GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTT-SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEECCC-CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 677666654 46789999997 4 332 22232 23566899999999999887764 6889999765 454321
Q ss_pred -ee---ec---cccc------ceeEEE-EccCCCEEEEEeCC-C-----cEEEEEcC-CCceeee---eccccccccccc
Q psy18074 71 -IY---HT---KRMQ------HVTHTV-WSLDNKFVISASDE-M-----NLRVWKAH-ASEKLGY---VNNKQRQALDYS 126 (197)
Q Consensus 71 -~~---~~---~~~~------~v~~v~-~~~~~~~l~~~~~d-g-----~i~vwd~~-~~~~~~~---~~~~~~~~~~~~ 126 (197)
.. .. +|.. .+..++ |+|||++|+++..+ + .|.+|++. +++.... .....
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~------- 306 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT------- 306 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS-------
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC-------
Confidence 11 11 1111 588999 99999998766532 2 89999996 4553321 11111
Q ss_pred cccceecccCc---ccceeeeecC--cceEEeecchh
Q psy18074 127 ESLKQKYAHHP---QIRRIARHRQ--VPRHIYNAQAE 158 (197)
Q Consensus 127 ~~~v~~~~~s~---~~~~l~~~~~--~~~~i~~~~~~ 158 (197)
..+..++|+| ||++|+.+.. +.+.+|+....
T Consensus 307 -~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 -SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred -CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 1246789999 8999886543 57889987543
No 170
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.35 E-value=9.2e-11 Score=83.96 Aligned_cols=148 Identities=6% Similarity=-0.041 Sum_probs=106.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCC-CCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
.+++|++++.++.|.+||..+ ++.+..+..+. ..+.++.++|+|+.++ +.++.|+.||. +++.+..+..+....+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT-KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT-TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCC-CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 578999999999999999976 67777776655 4688999999999888 45778999999 7888777754333468
Q ss_pred eEEEEccCCCEEEEEeC-CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-cceEEeecc
Q psy18074 81 THTVWSLDNKFVISASD-EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~~~i~~~~ 156 (197)
.++.+.|+|+++++.+. ++.+..+|. +|+.+..+..... ..........+++.++|+++++... ..+..|+..
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~--~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG--IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS--CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC--CCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 88999999999998877 778888886 6776665542211 0001112345567788888876654 355666654
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=3.9e-10 Score=82.37 Aligned_cols=145 Identities=10% Similarity=0.023 Sum_probs=97.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC----CcEEEEECCCCcccceee-ccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHSRDIYH-TKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~v~i~d~~~~~~~~~~~-~~~ 76 (197)
+|.+++++..++.|++||... +........+...+.+++++|+|..+++...+ +.|++||..++....... ..+
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 133 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPET-KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST 133 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTT-CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS
T ss_pred CCCEEEEECCCCEEEEEeCCC-CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc
Confidence 678888888889999999875 34333333456789999999999887777666 689999998776542321 123
Q ss_pred ccceeEEEEccCCCEEEEEeC------CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceee-ee-cCc
Q psy18074 77 MQHVTHTVWSLDNKFVISASD------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIA-RH-RQV 148 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~ 148 (197)
...+..++++|+|+++++... .+.|..+|..+++... +.... ..+..++|+|+++.|. +. ...
T Consensus 134 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~--------~~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 134 AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNI--------SVANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEE--------SSEEEEEECTTSSEEEEEEGGGT
T ss_pred CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCC--------CcccceEECCCCCEEEEEeCCCC
Confidence 357899999999998876653 3556666665444322 21111 1246889999998554 33 245
Q ss_pred ceEEeecc
Q psy18074 149 PRHIYNAQ 156 (197)
Q Consensus 149 ~~~i~~~~ 156 (197)
.+.+|+..
T Consensus 205 ~i~~~d~~ 212 (333)
T 2dg1_A 205 RLHRIALE 212 (333)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEec
Confidence 67778764
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.29 E-value=8.2e-11 Score=86.37 Aligned_cols=114 Identities=11% Similarity=0.162 Sum_probs=81.5
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC---C--cEEEEECCCCcccceeecccccceeEEEEc
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---K--SLRLYLAHQGHSRDIYHTKRMQHVTHTVWS 86 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---~--~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~ 86 (197)
++.|++||+.. +.. ..+ ..+..+.|+|+|+.|+.++.+ + .|++|++.+++....... + . +..++|+
T Consensus 42 ~~~l~~~d~~~-~~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~-~-~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKN-NAR-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K-N-IRSLEWN 112 (347)
T ss_dssp EEEEEEEETTT-CCE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S-E-EEEEEEC
T ss_pred cceEEEEeCCC-Cce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C-C-ccceeEC
Confidence 56788999875 332 333 567889999999999877643 2 488889888776554422 2 3 8999999
Q ss_pred cCCCEEEEEeC---------------------------CCcEEEEEcCCCceeeeeccccccccccccccceecccCccc
Q psy18074 87 LDNKFVISASD---------------------------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQI 139 (197)
Q Consensus 87 ~~~~~l~~~~~---------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 139 (197)
|+|+.|+.++. ...|++||+.+++.+..+.. . . +..++|+|||
T Consensus 113 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~--------~~~~~~spdg 182 (347)
T 2gop_A 113 EDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-R--------FSSGIWHRDK 182 (347)
T ss_dssp TTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-T--------TCEEEEETTE
T ss_pred CCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-C--------cccccCCCCe
Confidence 99999887653 25699999988876344433 1 1 5788999999
Q ss_pred ceeeee
Q psy18074 140 RRIARH 145 (197)
Q Consensus 140 ~~l~~~ 145 (197)
+++++
T Consensus 183 -~~~~~ 187 (347)
T 2gop_A 183 -IVVNV 187 (347)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 66554
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.29 E-value=8.6e-11 Score=86.07 Aligned_cols=148 Identities=7% Similarity=0.006 Sum_probs=103.1
Q ss_pred CccEEEEEc-CCCcEEEEEccCCCCceeeccc----------CCCCeEEEEECCC-CCEEEEEeCCCcEEEEECCCCccc
Q psy18074 2 EAFVFTAAN-EDFNLYSYDIRQLNSPLNVHKD----------MTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHSR 69 (197)
Q Consensus 2 ~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~----------~~~~v~~~~~sp~-~~~l~~~~~d~~v~i~d~~~~~~~ 69 (197)
++.++++.+ .++.|++||.. +..+..+.. +.....+++++|+ +..+++...++.|++|+..+++.+
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~--g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPS--GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTT--SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCeEEEEeCCCCCeEEEEcCC--CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 578888886 68999999954 454554422 1234889999998 667777778899999999988776
Q ss_pred ceee-cccccceeEEEEccCCCEEEE-------EeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccce
Q psy18074 70 DIYH-TKRMQHVTHTVWSLDNKFVIS-------ASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRR 141 (197)
Q Consensus 70 ~~~~-~~~~~~v~~v~~~~~~~~l~~-------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 141 (197)
..+. ..+...+..++|+| +..+++ ...+..|++||+.+++.+..+..... +...+..++++|+|..
T Consensus 232 ~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-----~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 232 REIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-----HFDMPHDIVASEDGTV 305 (329)
T ss_dssp EEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS-----CCSSEEEEEECTTSEE
T ss_pred EEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC-----ccCCeeEEEECCCCCE
Confidence 6552 23446788999999 333333 33455899999999988877642111 1123578999999977
Q ss_pred eeeecC-cceEEeecch
Q psy18074 142 IARHRQ-VPRHIYNAQA 157 (197)
Q Consensus 142 l~~~~~-~~~~i~~~~~ 157 (197)
+++... ..+.+|+...
T Consensus 306 yvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 306 YIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEESSSCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCc
Confidence 776554 4778887643
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.28 E-value=2.8e-10 Score=84.71 Aligned_cols=149 Identities=11% Similarity=-0.030 Sum_probs=99.6
Q ss_pred CCccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEE--ECCCCCEEEEE----------------------eCCC
Q psy18074 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD--YSPTGREFVAG----------------------GYDK 56 (197)
Q Consensus 1 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~--~sp~~~~l~~~----------------------~~d~ 56 (197)
.||..|+.++.++.|++||+.+ +.....+..+...+.... ++|++..++.. ..+.
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLAT-LEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTT-CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CCCCEEEEEeCCCeEEEEECCC-CcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 3788899988888999999986 444444544455454343 48999988742 2346
Q ss_pred cEEEEECCCCcccceeecccccceeEEEEcc-CCCEEEEEeCC------CcEEEEEcCCCceeeeecccccccccccccc
Q psy18074 57 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDE------MNLRVWKAHASEKLGYVNNKQRQALDYSESL 129 (197)
Q Consensus 57 ~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 129 (197)
.|++||+.++...... .+...+..++|+| +|+.|+....+ ..|.++|+..+... .+...... ..
T Consensus 169 ~l~~~d~~~g~~~~l~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~------~~ 239 (388)
T 3pe7_A 169 RLMRVDLKTGESTVIL--QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEG------ES 239 (388)
T ss_dssp EEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTT------EE
T ss_pred eEEEEECCCCceEEee--cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCC------cc
Confidence 8999999988765443 3346789999999 99998876653 36888887655433 33222210 12
Q ss_pred ceecccCcccceeeeecC--c--c--eEEeecchhh
Q psy18074 130 KQKYAHHPQIRRIARHRQ--V--P--RHIYNAQAEH 159 (197)
Q Consensus 130 v~~~~~s~~~~~l~~~~~--~--~--~~i~~~~~~~ 159 (197)
+..++|+|||+.|+.... . . +.+|++...+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 467889999998864221 1 2 7788876543
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.27 E-value=1.1e-10 Score=86.61 Aligned_cols=101 Identities=10% Similarity=0.080 Sum_probs=77.9
Q ss_pred CCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEECCCCcccceeecc-----
Q psy18074 11 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGHSRDIYHTK----- 75 (197)
Q Consensus 11 ~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~v~i~d~~~~~~~~~~~~~----- 75 (197)
.|+.|++||..+ ++.+..+..+..+ .++|+|+++++++++ .++.|.+||..+++....+...
T Consensus 29 ~d~~v~v~D~~t-~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 29 TESRVHVYDYTN-GKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GGCEEEEEETTT-CCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred ccCeEEEEECCC-CeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 367999999876 4666666655444 899999999998876 2567999999988776655322
Q ss_pred cccceeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeee
Q psy18074 76 RMQHVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGY 114 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~ 114 (197)
+...+..++|+|+|++|+++.. ++.|.+||+.+++.+..
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 1245678999999999987753 68899999999887766
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.26 E-value=6.4e-10 Score=87.15 Aligned_cols=110 Identities=12% Similarity=0.029 Sum_probs=86.9
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC--CCcccceeecccccce
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH--QGHSRDIYHTKRMQHV 80 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~--~~~~~~~~~~~~~~~v 80 (197)
+.++++...++.|.++|..+ .+.+..+.. ...+..+.++|+|+++++++.++.|.+||+. +++.+..+..+ ...
T Consensus 167 ~~~~V~~~~~~~V~viD~~t-~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--~~P 242 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGST-YEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SEA 242 (567)
T ss_dssp GEEEEEETTTTEEEEEETTT-CCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SEE
T ss_pred ceEEEEeCCCCeEEEEECCC-CeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC--CCC
Confidence 45778888899999999987 466666643 3456799999999999999999999999996 66665555443 457
Q ss_pred eEEEEc----cCCCEEEEEe-CCCcEEEEEcCCCceeeeec
Q psy18074 81 THTVWS----LDNKFVISAS-DEMNLRVWKAHASEKLGYVN 116 (197)
Q Consensus 81 ~~v~~~----~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~ 116 (197)
..++|+ |||++++++. .++.+.++|..+.+.+..+.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 899999 6999988654 46899999998888776554
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.26 E-value=6.7e-10 Score=81.34 Aligned_cols=150 Identities=11% Similarity=0.165 Sum_probs=101.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeec---------ccCCCCeEEEEECC-CCCEEEEEe-CCCcEEEEECCCCcccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYSP-TGREFVAGG-YDKSLRLYLAHQGHSRD 70 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~~~~~~v~~~~~sp-~~~~l~~~~-~d~~v~i~d~~~~~~~~ 70 (197)
+|+++++...++.|++||.......+..+ ..+......++++| ++..+++.+ .++.|++|+ .++....
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 67889999889999999986321144444 23445689999999 788778776 689999999 4465554
Q ss_pred eeec---------ccccceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCc---
Q psy18074 71 IYHT---------KRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHP--- 137 (197)
Q Consensus 71 ~~~~---------~~~~~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--- 137 (197)
.+.. .+...+..++++|+ ++++++...++.|++||..+++.+..+..... ...+..++|+|
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~------~~~~~~~~~~pg~~ 253 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF------GRNVFAISYIPGFL 253 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT------TTCEEEEEEETTEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc------CCCcceeeecCCEE
Confidence 4421 12234899999998 77777878889999999988887776643221 11245677777
Q ss_pred ---ccceeeeecC-cceEEeecchh
Q psy18074 138 ---QIRRIARHRQ-VPRHIYNAQAE 158 (197)
Q Consensus 138 ---~~~~l~~~~~-~~~~i~~~~~~ 158 (197)
+|+..++... ..+.+|+....
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTC
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCC
Confidence 4443333222 25677775443
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=6.2e-10 Score=79.61 Aligned_cols=144 Identities=9% Similarity=0.098 Sum_probs=100.8
Q ss_pred CccEEEEEcC-CCcEEEEEccCCCCceeecc-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceee-ccccc
Q psy18074 2 EAFVFTAANE-DFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~ 78 (197)
++.++++... ++.|.+||.. +..+..+. .+...+.+++++|+|..+++...++.|++|+.. +.....+. ..+..
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~--g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQY--GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLE 164 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTT--SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCS
T ss_pred CCeEEEEcCCCCCEEEEECCC--CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccC
Confidence 4566666643 7889999954 44444443 334578999999999977777778999999965 44433332 13335
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCc--ceEEeec
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQV--PRHIYNA 155 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--~~~i~~~ 155 (197)
.+..++++|+|+++++...++.|.+||.. ++.+..+..... ...+..++++++|+++++.... .+.+|+.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~------~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI------TNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT------SCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCc------cCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 68999999999988887888999999974 555544433210 1125789999999888776543 6788874
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.23 E-value=7.1e-10 Score=79.80 Aligned_cols=142 Identities=9% Similarity=0.006 Sum_probs=97.8
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec---ccc
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT---KRM 77 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~---~~~ 77 (197)
+|+ +++++..++.|+.||... . ...+..+...+.+++++|+|..+++...++.|.+||..++........ ...
T Consensus 38 ~g~~l~~~~~~~~~i~~~~~~~--~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 38 ARSAVIFSDVRQNRTWAWSDDG--Q-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKL 114 (296)
T ss_dssp GGTEEEEEEGGGTEEEEEETTS--C-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEEC
T ss_pred CCCEEEEEeCCCCEEEEEECCC--C-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCC
Confidence 465 788888899999999985 3 556666677899999999999887777778999999988775433211 112
Q ss_pred cceeEEEEccCCCEEEE----Ee-------------CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc
Q psy18074 78 QHVTHTVWSLDNKFVIS----AS-------------DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR 140 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~----~~-------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 140 (197)
..+..++++|+|+++++ ++ ..+.|..++.. ++. ..+.... .....++|+|+++
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~--------~~~~gi~~s~dg~ 184 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDR--------VKPNGLAFLPSGN 184 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCC--------SSEEEEEECTTSC
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCC--------CCCccEEECCCCC
Confidence 35678999999998887 32 12355555544 332 2222221 1247899999999
Q ss_pred eeeeecC-cceEEeecc
Q psy18074 141 RIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 141 ~l~~~~~-~~~~i~~~~ 156 (197)
.+++... ..+.+|+..
T Consensus 185 ~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 185 LLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCeEEEEEEC
Confidence 8855443 467778764
No 180
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.21 E-value=4.1e-10 Score=83.96 Aligned_cols=135 Identities=9% Similarity=-0.013 Sum_probs=94.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCC----------CceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN----------SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI 71 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~----------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~ 71 (197)
...++++|+.++ +.+|++.... ++... ..+.+ |+.++| ++..|+++ .++.|++||+.+......
T Consensus 48 ~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~ 121 (388)
T 1xip_A 48 SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRT 121 (388)
T ss_dssp TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEE
T ss_pred CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCc
Confidence 356778887774 6679875321 12122 24566 999999 89999988 789999999987553332
Q ss_pred eecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceE
Q psy18074 72 YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRH 151 (197)
Q Consensus 72 ~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 151 (197)
. ..+...+.++.+.+. .++.++.||.+.+||+.++.... . . ..|.+++|||+| ..+...++.+.
T Consensus 122 ~-~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~---~--------~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 122 V-TSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L---A--------QNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp E-EECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E---E--------ESEEEEEECSSE-EEEEETTSCEE
T ss_pred c-ceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c---c--------CCceEEEEcCCc-eEEEEcCCcEE
Confidence 2 334456777777654 28888999999999998776543 1 1 137899999999 44555667888
Q ss_pred Eeecchh
Q psy18074 152 IYNAQAE 158 (197)
Q Consensus 152 i~~~~~~ 158 (197)
+|+....
T Consensus 186 ~~~~~~~ 192 (388)
T 1xip_A 186 SFAWRNG 192 (388)
T ss_dssp EEEEETT
T ss_pred EEcCCCc
Confidence 9866543
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.19 E-value=4.7e-10 Score=90.24 Aligned_cols=146 Identities=8% Similarity=0.008 Sum_probs=93.6
Q ss_pred CCccEEEEEcCCC-----cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCc----------------EE
Q psy18074 1 MEAFVFTAANEDF-----NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS----------------LR 59 (197)
Q Consensus 1 ~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~----------------v~ 59 (197)
.||++|+.+..++ .|++||+.+ +........ ...+..++|+|||+.|+.++.++. |+
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~t-g~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~ 211 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDG-AKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTT-TEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCC-CCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEE
Confidence 3778777654433 899999986 443332212 223678999999999998887765 99
Q ss_pred EEECCCCcccc--eee-cccccceeEEEEccCCCEEEEEeC-----CCcEEEEEcCC------Cc-eeeeeccccccccc
Q psy18074 60 LYLAHQGHSRD--IYH-TKRMQHVTHTVWSLDNKFVISASD-----EMNLRVWKAHA------SE-KLGYVNNKQRQALD 124 (197)
Q Consensus 60 i~d~~~~~~~~--~~~-~~~~~~v~~v~~~~~~~~l~~~~~-----dg~i~vwd~~~------~~-~~~~~~~~~~~~~~ 124 (197)
+|++.++.... .+. ..+...+..++|+|||++|+..+. +..|++||+.+ +. ....+..+...
T Consensus 212 ~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~--- 288 (710)
T 2xdw_A 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG--- 288 (710)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---
T ss_pred EEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc---
Confidence 99998876432 221 123455789999999999886654 56899999976 43 23344433322
Q ss_pred cccccceecccCcccceeeeecC-c----ceEEeecch
Q psy18074 125 YSESLKQKYAHHPQIRRIARHRQ-V----PRHIYNAQA 157 (197)
Q Consensus 125 ~~~~~v~~~~~s~~~~~l~~~~~-~----~~~i~~~~~ 157 (197)
+.. .|+|+|..|+.... . .+.+|++..
T Consensus 289 -----~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~ 320 (710)
T 2xdw_A 289 -----EYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD 320 (710)
T ss_dssp -----CEE-EEEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred -----EEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 122 47888887763322 1 356666543
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.18 E-value=1.8e-09 Score=76.38 Aligned_cols=148 Identities=7% Similarity=-0.037 Sum_probs=100.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+|+++++...++.|.+|+... .............+.+++++|+|..+++...++.|.+|+.......... ..+...+.
T Consensus 118 ~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p~ 195 (270)
T 1rwi_B 118 QGAVYVADRGNNRVVKLAAGS-KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-FTDITAPW 195 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTC-CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-CSSCCSEE
T ss_pred CCCEEEEECCCCEEEEEECCC-ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-ccCCCCce
Confidence 577788877788899997654 2222222222346788999999987777777889999998866543322 22225688
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhh
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEH 159 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~ 159 (197)
.++++++|..+++...++.|.+||.............. ..+..++++++|+..++.. ++.+.+++....+
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~--------~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGL--------NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSC--------SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCC--------CCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 99999999877777778899999986543322111111 2257899999998666654 4477888776554
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=2.8e-09 Score=76.68 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=85.6
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC-CCcc---cceeecccccceeEEEEccC
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-QGHS---RDIYHTKRMQHVTHTVWSLD 88 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~-~~~~---~~~~~~~~~~~v~~v~~~~~ 88 (197)
+.|+.++.. +. ...+..+......++|+|++..+++.+.++.|++|++. ++.. ...+ ..+...+..++++++
T Consensus 153 ~~l~~~~~~--g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 153 RWVFRLAPD--GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAG 228 (296)
T ss_dssp CEEEEECTT--SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTT
T ss_pred cEEEEECCC--CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCC
Confidence 345555543 23 34445556778999999999988777778999999987 4544 2233 334456778999999
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceeccc-CcccceeeeecCcceEEee
Q psy18074 89 NKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAH-HPQIRRIARHRQVPRHIYN 154 (197)
Q Consensus 89 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~~~~~i~~ 154 (197)
|+++++. ++.|.+||.. ++.+..+..+.. +.+++| +|+++.|..+....+.-++
T Consensus 229 G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~---------~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 229 GLIWASA--GDGVHVLTPD-GDELGRVLTPQT---------TSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp SCEEEEE--TTEEEEECTT-SCEEEEEECSSC---------CCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred CCEEEEc--CCeEEEECCC-CCEEEEEECCCC---------ceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 9977666 7889999986 666655543332 367888 6888877765555443333
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.16 E-value=1e-09 Score=88.25 Aligned_cols=115 Identities=10% Similarity=0.013 Sum_probs=80.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCc---------
Q psy18074 35 SAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN--------- 100 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~--------- 100 (197)
..+..+.|||||++|+.+..++ .|++||+.+++........ ..+..++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--cccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 4588999999999998765433 8999999998876543222 23678999999999998877665
Q ss_pred -------EEEEEcCCCcee--eeeccccccccccccccceecccCcccceeeeec------CcceEEeecch
Q psy18074 101 -------LRVWKAHASEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR------QVPRHIYNAQA 157 (197)
Q Consensus 101 -------i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~~~~~i~~~~~ 157 (197)
|++|++.+++.. ..+..... ...+..+.|||||++|+... ...+.+|++..
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDE------PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTC------TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCC------CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 999999877632 12222111 11246789999999988543 23556777654
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.16 E-value=1.9e-09 Score=78.90 Aligned_cols=144 Identities=4% Similarity=-0.029 Sum_probs=100.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe-CCCcEEEEECCCCcccceeeccc----
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDIYHTKR---- 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~---- 76 (197)
++.++++...++.|.+||..+ .+.+..+. .......++++|++ .++.+. .++.|.+||..+++....+..+.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t-~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINT-FKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTT-CCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred CCEEEEEEcCCCEEEEEECcc-cEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCcccc
Confidence 356777777789999999987 46666664 34678899999888 455544 88999999999988765553331
Q ss_pred ccceeEEEEccCCCEEEEEe-CCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC--------
Q psy18074 77 MQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-------- 147 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------- 147 (197)
...+..+++ .+++.+++.. .++.|.++|+.+++.+..+..... ...++++|+|+++++...
T Consensus 130 ~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~---------p~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 130 SGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ---------PTSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp TCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC---------BCCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred CCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC---------ccceEEcCCCCEEEEECCCccCCccc
Confidence 015567777 4444444443 488999999999887776654322 367889999987776543
Q ss_pred ---cceEEeecchh
Q psy18074 148 ---VPRHIYNAQAE 158 (197)
Q Consensus 148 ---~~~~i~~~~~~ 158 (197)
..+.+++....
T Consensus 200 ~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 200 YEAPSLYRIDAETF 213 (328)
T ss_dssp BCCCEEEEEETTTT
T ss_pred cCCceEEEEECCCC
Confidence 35677776543
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.15 E-value=1e-09 Score=81.73 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=83.8
Q ss_pred CcEEEEEccCCCCceeecccCC--CCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcccceeecccccceeEEEE
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMT--SAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 85 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~ 85 (197)
..|.+||+.. +. ...+..+. ..+..+.|+|+|+.|+.++.+ +.|++||+.++......... ... ++|
T Consensus 216 ~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~-~~~ 289 (396)
T 3c5m_A 216 ARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS-HLM 289 (396)
T ss_dssp CCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE-EEE
T ss_pred ceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC-CCc
Confidence 3688888864 23 33333332 357889999999988776543 34999999888654432111 233 889
Q ss_pred cc-CCCEEEEEe----------------CCCcEEEEEcCCCceeeeeccccccc--cc-cccccceecccCcccceeeee
Q psy18074 86 SL-DNKFVISAS----------------DEMNLRVWKAHASEKLGYVNNKQRQA--LD-YSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 86 ~~-~~~~l~~~~----------------~dg~i~vwd~~~~~~~~~~~~~~~~~--~~-~~~~~v~~~~~s~~~~~l~~~ 145 (197)
+| +|+++++++ .+..|++||+.+++.. .+..+.... +. .....+..++|+|||+.|+..
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEE
Confidence 99 999888654 3478999999877643 232222100 00 000013567899999988744
Q ss_pred c--CcceEEeecc
Q psy18074 146 R--QVPRHIYNAQ 156 (197)
Q Consensus 146 ~--~~~~~i~~~~ 156 (197)
+ .....||...
T Consensus 369 s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 369 SDFEGVPAIYIAD 381 (396)
T ss_dssp ECTTSSCEEEEEE
T ss_pred ecCCCCceEEEEE
Confidence 3 3355666553
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.14 E-value=1.8e-09 Score=80.17 Aligned_cols=124 Identities=8% Similarity=-0.009 Sum_probs=85.1
Q ss_pred EEEEEcCCCcEEEEEccCCCCc-eeeccc------CC----CCeEEEEECCCCCEEEEEeC-----------CCcEEEEE
Q psy18074 5 VFTAANEDFNLYSYDIRQLNSP-LNVHKD------MT----SAVTSVDYSPTGREFVAGGY-----------DKSLRLYL 62 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~~~-~~~~~~------~~----~~v~~~~~sp~~~~l~~~~~-----------d~~v~i~d 62 (197)
.++..+.++.|+++|+...... ...+.. .. .....++++|++..++++.. ...|.+||
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD 292 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMD 292 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEE
Confidence 4444556788999998642111 111100 00 11123689999888776543 34899999
Q ss_pred CCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCC--ceeeeeccccccccccccccceecccCcccc
Q psy18074 63 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGYVNNKQRQALDYSESLKQKYAHHPQIR 140 (197)
Q Consensus 63 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 140 (197)
+.+++.+..+..+ . +.+++|+|+|++|+++.. +.|.+||..++ +.+..+...... ...++++|+|.
T Consensus 293 ~~t~~~v~~i~~~--~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~--------P~~~~~~p~G~ 360 (361)
T 2oiz_A 293 TKTKQRVARIPGR--D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEA--------SLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEEEECT--T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSS--------EEEEEECCCSC
T ss_pred CCCCcEEEEEecC--C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCC--------cEEEEecCCCC
Confidence 9999887776444 3 899999999999998876 99999999999 888776322221 36788999885
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.14 E-value=5.4e-10 Score=89.70 Aligned_cols=106 Identities=8% Similarity=-0.051 Sum_probs=73.8
Q ss_pred CCCCeEEEEECCCCCEEEEE-----eCCCcEEEEECCCCccc-ceeecccccceeEEEEccCCCEEEEEeCCCc------
Q psy18074 33 MTSAVTSVDYSPTGREFVAG-----GYDKSLRLYLAHQGHSR-DIYHTKRMQHVTHTVWSLDNKFVISASDEMN------ 100 (197)
Q Consensus 33 ~~~~v~~~~~sp~~~~l~~~-----~~d~~v~i~d~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~------ 100 (197)
|...+.++.|||||++|+.+ +.+..|++||+.+++.+ ... ... .....++|+|||+.|+.++.+..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~-~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV-IEG-GKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC-BSC-CTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc-cCc-ccccceEEecCCCEEEEEEecCCCCCccc
Confidence 44468999999999998843 34468999999998865 211 111 11268999999999998887765
Q ss_pred -------EEEEEcCCCcee--eeeccccccccccccccceecccCcccceeeeec
Q psy18074 101 -------LRVWKAHASEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 101 -------i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
|++|++.+++.. ..+..... ...+..+.|||||++|+...
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~------~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGD------PTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCC------TTCEEEEEECTTSCCEEEEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCC------CEEEEEEEECCCCCEEEEEE
Confidence 999999887632 22222111 11256889999999988544
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.10 E-value=2.8e-10 Score=84.73 Aligned_cols=132 Identities=11% Similarity=-0.016 Sum_probs=85.2
Q ss_pred CccEEEEEcC---CCcEEEEEccCCCCceeecccCCCC-eEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccc
Q psy18074 2 EAFVFTAANE---DFNLYSYDIRQLNSPLNVHKDMTSA-VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 77 (197)
||..|+.... +..|++||+.. +.. ..+..+... ...+.|+|+|+.|+.++.++.|++||+.++....... .+.
T Consensus 46 dG~~l~~~~~~~g~~~l~~~d~~~-~~~-~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~-~~~ 122 (396)
T 3c5m_A 46 DGKKLLFAGDFDGNRNYYLLNLET-QQA-VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT-VDE 122 (396)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTT-TEE-EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CCT
T ss_pred CCCEEEEEEecCCCceEEEEECCC-CcE-EEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe-ccc
Confidence 6777666533 23688888875 333 333333333 3347899999999999989999999999887544432 121
Q ss_pred cceeE-------------------EEEccCCCEEEEE-----eCCCcEEEEEcCCCceeeeeccccccccccccccceec
Q psy18074 78 QHVTH-------------------TVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKY 133 (197)
Q Consensus 78 ~~v~~-------------------v~~~~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 133 (197)
..... ++|+|++++++.. ..+..|.+||+.+++...... .. ..+..+
T Consensus 123 ~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~--------~~~~~~ 193 (396)
T 3c5m_A 123 EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DT--------AWLGHP 193 (396)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ES--------SCEEEE
T ss_pred ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CC--------cccccc
Confidence 22212 3567888776644 356789999998877554332 11 125688
Q ss_pred ccCc-ccceeeee
Q psy18074 134 AHHP-QIRRIARH 145 (197)
Q Consensus 134 ~~s~-~~~~l~~~ 145 (197)
.|+| ++..|+..
T Consensus 194 ~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 194 IYRPFDDSTVGFC 206 (396)
T ss_dssp EEETTEEEEEEEE
T ss_pred eECCCCCCEEEEE
Confidence 9999 88877643
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.09 E-value=4.8e-09 Score=76.81 Aligned_cols=144 Identities=8% Similarity=-0.028 Sum_probs=98.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCC-----CCeEEEEECCCCCEEEEEe--CCCcEEEEECCCCcccceeec
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT-----SAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~ 74 (197)
++.++++...++.|.+||+.+ .+....+.... .....+++ ++..++.++ .++.|.++|+.++.....+..
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t-~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKT-YEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTT-TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEECCC-CeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 455666665789999999986 34444443222 14456777 455555554 488999999999887666533
Q ss_pred ccccceeEEEEccCCCEEEEEeCC----------CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeee
Q psy18074 75 KRMQHVTHTVWSLDNKFVISASDE----------MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIAR 144 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 144 (197)
+ ..+..++++|+|++++++..+ +.|.++|..+++....+..... .....++++|+++++..
T Consensus 171 g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-------~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 171 G--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-------DWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp S--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-------CCCEEEEECTTSCEEEE
T ss_pred C--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-------CCceeEEEecCCCEEEE
Confidence 3 456788999999977776554 7899999998887655543211 12478999999888875
Q ss_pred ecCcceEEeecchh
Q psy18074 145 HRQVPRHIYNAQAE 158 (197)
Q Consensus 145 ~~~~~~~i~~~~~~ 158 (197)
... .+.+|+....
T Consensus 242 ~~~-~v~~~d~~t~ 254 (328)
T 3dsm_A 242 INN-DIWRMPVEAD 254 (328)
T ss_dssp ESS-SEEEEETTCS
T ss_pred Ecc-EEEEEECCCC
Confidence 544 6777776543
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.07 E-value=2.7e-09 Score=85.69 Aligned_cols=107 Identities=11% Similarity=0.065 Sum_probs=73.9
Q ss_pred CCccEEE-----EEcCCCcEEEEEccCCCCce-e-ecccCCCCeEEEEECCCCCEEEEEeCCCc-------------EEE
Q psy18074 1 MEAFVFT-----AANEDFNLYSYDIRQLNSPL-N-VHKDMTSAVTSVDYSPTGREFVAGGYDKS-------------LRL 60 (197)
Q Consensus 1 ~~~~~l~-----~~~~d~~i~i~d~~~~~~~~-~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-------------v~i 60 (197)
.||++|| .|+.+..|++||+.+ +... . .+.. .....++|+|||+.|+.++.+.. |++
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~t-g~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~ 206 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDS-GEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY 206 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTT-CCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCC-CCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence 3778887 455567899999986 3332 1 1211 11267899999999999888765 999
Q ss_pred EECCCCccc--cee-ecccccceeEEEEccCCCEEEEEeCCC----cEEEEEcCCCc
Q psy18074 61 YLAHQGHSR--DIY-HTKRMQHVTHTVWSLDNKFVISASDEM----NLRVWKAHASE 110 (197)
Q Consensus 61 ~d~~~~~~~--~~~-~~~~~~~v~~v~~~~~~~~l~~~~~dg----~i~vwd~~~~~ 110 (197)
|++.++... ..+ ...+...+..++|+|||++|+..+.++ .|.+|+..+++
T Consensus 207 ~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 207 HTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp EETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred EECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 999987642 222 122335788999999999998766555 67777665544
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=2.6e-09 Score=77.99 Aligned_cols=128 Identities=4% Similarity=0.018 Sum_probs=90.8
Q ss_pred EEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEcc
Q psy18074 8 AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL 87 (197)
Q Consensus 8 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~ 87 (197)
..+.++.+..|. ......+..+...+.+++|+|++..++++..++.|++||..++...... ..+...+.+++++|
T Consensus 22 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 22 PIISESELQTIT----AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHK 96 (333)
T ss_dssp CCCCGGGSCEEE----CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECT
T ss_pred EEeecccCcccc----cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-eCCCCCcceEEECC
Confidence 334566677772 3445556666677899999999997778888899999999887754433 23446799999999
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec
Q psy18074 88 DNKFVISASDE----MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 88 ~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
+|+++++...+ +.|.+||..++.....+.... ....+..++++|+|+++++..
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS------TAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS------SCCCEEEEEECTTSCEEEEEC
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc------cCCcccceEECCCCCEEEEec
Confidence 99988877666 689999988766442322111 112357889999998777654
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.06 E-value=1.6e-08 Score=71.52 Aligned_cols=143 Identities=8% Similarity=-0.026 Sum_probs=96.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecc-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+|.++++.. ++.|..||... .....+. .....+.+++++|+|..+++...++.|.+|+..+....... ......+
T Consensus 77 ~g~l~v~~~-~~~i~~~d~~~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~~~p 152 (270)
T 1rwi_B 77 AGTVYVTDF-NNRVVTLAAGS--NNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGLNDP 152 (270)
T ss_dssp TCCEEEEET-TTEEEEECTTC--SCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSCCSC
T ss_pred CCCEEEEcC-CCEEEEEeCCC--ceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccCCCc
Confidence 567777766 78899999874 2233332 22357899999999987777777889999976554332211 2222467
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
..++++|+|+.+++...++.|.+||.............. ..+..++++++|...++.. ...+.+|+..
T Consensus 153 ~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI--------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC--------CSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC--------CCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 889999999977777778899999987655432221111 1257889999987666554 4467777764
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.04 E-value=1.1e-08 Score=73.13 Aligned_cols=140 Identities=8% Similarity=-0.044 Sum_probs=99.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCC-CCeEEEEECCCCCEEEEEeC-CCcEEEEECCCCcccceeec-----
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIYHT----- 74 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~----- 74 (197)
+|+++++ .++.|..||. + ++.+..+.... ..+.++.+.|+|..+++.+. ++.+..++. +|+.+..+..
T Consensus 47 dG~ilvs--~~~~V~~~d~-~-G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~ 121 (276)
T 3no2_A 47 AGEILFS--YSKGAKMITR-D-GRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE 121 (276)
T ss_dssp TSCEEEE--CBSEEEEECT-T-SCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS
T ss_pred CCCEEEe--CCCCEEEECC-C-CCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC
Confidence 6788883 4677999998 4 56677776543 46888999999999998877 777887876 5665554421
Q ss_pred ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCc-ceEEe
Q psy18074 75 KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQV-PRHIY 153 (197)
Q Consensus 75 ~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-~~~i~ 153 (197)
.+......+++.++|+++++...++.|..||.. |+.+..+..... +......++|+.++++.+. .+..+
T Consensus 122 ~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~---------~~~~~~~~~g~~~v~~~~~~~v~~~ 191 (276)
T 3no2_A 122 RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGT---------PFSSAFLDNGDCLVACGDAHCFVQL 191 (276)
T ss_dssp SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSC---------CCEEEECTTSCEEEECBTTSEEEEE
T ss_pred cccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCC---------ccceeEcCCCCEEEEeCCCCeEEEE
Confidence 122345567789999999999999999999998 998888765422 2455667788777765544 34444
Q ss_pred ecc
Q psy18074 154 NAQ 156 (197)
Q Consensus 154 ~~~ 156 (197)
+..
T Consensus 192 d~~ 194 (276)
T 3no2_A 192 NLE 194 (276)
T ss_dssp CTT
T ss_pred eCc
Confidence 443
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.03 E-value=6.9e-09 Score=77.23 Aligned_cols=112 Identities=6% Similarity=-0.106 Sum_probs=84.5
Q ss_pred CccEEEEEcC-----CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEECCCC
Q psy18074 2 EAFVFTAANE-----DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~v~i~d~~~~ 66 (197)
++..+++... ++.|.++|..+ .+.+..+.....+ . +.++|+|+++++++ .++.|.+||..++
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t-~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEA-GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTT-TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCC-CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 4555666544 67899999987 4666666654455 4 99999999887765 3578999999998
Q ss_pred cccceeeccc------ccceeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeeeec
Q psy18074 67 HSRDIYHTKR------MQHVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGYVN 116 (197)
Q Consensus 67 ~~~~~~~~~~------~~~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~ 116 (197)
+....+..+. ......++|+|||++++.+.. ++.|.++|+.+++.+.++.
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 177 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence 8776653321 124677999999999887753 6889999999998887764
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.03 E-value=6.5e-09 Score=76.18 Aligned_cols=127 Identities=9% Similarity=0.180 Sum_probs=79.7
Q ss_pred CCccEEEEEcCC---C--cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC--------------------
Q psy18074 1 MEAFVFTAANED---F--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-------------------- 55 (197)
Q Consensus 1 ~~~~~l~~~~~d---~--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------------------- 55 (197)
.||..|+.++.+ + .|++||+.. +...... .+.. +..+.|+|+|+.|+.++.+
T Consensus 68 pDg~~la~~~~~~~~~~~~l~~~~~~~-g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 68 PDGKKIAFMRANEEKKVSEIWVADLET-LSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEETTT-TEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred CCCCEEEEEEeccCCCcceEEEEECCC-CceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 367777766543 2 377788765 3433333 3334 9999999999998887632
Q ss_pred -------CcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCC-------cEEEEEcCCCceeeeecccccc
Q psy18074 56 -------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM-------NLRVWKAHASEKLGYVNNKQRQ 121 (197)
Q Consensus 56 -------~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg-------~i~vwd~~~~~~~~~~~~~~~~ 121 (197)
..|++||+.++.....+.. . .+..++|+|+| +++++..++ ...+|.+.+++. ..+..+ ..
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~ 218 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VS 218 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ES
T ss_pred ccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC-cc
Confidence 5799999998876333322 2 78899999999 777765442 334444444443 233222 11
Q ss_pred ccccccccceecccCcccceeeeec
Q psy18074 122 ALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 122 ~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
+..+ +|||++|+...
T Consensus 219 --------~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 219 --------FYAV--DSDGERILLYG 233 (347)
T ss_dssp --------EEEE--EECSSCEEEEE
T ss_pred --------eeeE--CCCCCEEEEEE
Confidence 2233 89999887543
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.01 E-value=7.7e-08 Score=68.74 Aligned_cols=143 Identities=3% Similarity=-0.092 Sum_probs=98.0
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-ecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+|.++++...++.|..||.. +.... ........+.+++++++|..+++...++.|..||. ++.............+
T Consensus 109 ~g~l~v~~~~~~~i~~~d~~--g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 109 NGDIWFTEMNGNRIGRITDD--GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCEEEEecCCceEEEECCC--CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 57788887778889999983 33222 22334467899999999987777767789999998 6655433222233568
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee-cCcceEEeec
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH-RQVPRHIYNA 155 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~~i~~~ 155 (197)
..++++++|+.+++...++.|.+||. ++.... +.... ....+..++++++|+..++. ....+..|+.
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPT------PNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSS------TTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred eeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCC------CCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 89999999998777767889999998 665332 21110 11235789999999876665 3456777775
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.96 E-value=1.4e-07 Score=67.34 Aligned_cols=143 Identities=2% Similarity=-0.119 Sum_probs=95.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceee-cccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+|.++++...++.|..||. + +..... +......+.++++++++..+++...++.|..|+. ++.........+...+
T Consensus 151 ~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 227 (299)
T 2z2n_A 151 DNALWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARP 227 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCc
Confidence 5677887777788999998 4 333222 3334456889999999987776666888999999 6654332222234678
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecc
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQ 156 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~ 156 (197)
.+++++++|+.+++...++.|..||. ++. +..+..... ...+.++++ ++|++.++...+.+..++..
T Consensus 228 ~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~------~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~ 294 (299)
T 2z2n_A 228 HAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIK------SAEPHGICF-DGETIWFAMECDKIGKLTLI 294 (299)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSS------SCCEEEEEE-CSSCEEEEETTTEEEEEEEC
T ss_pred eeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCC------CCccceEEe-cCCCEEEEecCCcEEEEEcC
Confidence 99999999997777667788999998 444 222211110 122578888 88887776555566666543
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.94 E-value=1.5e-08 Score=82.02 Aligned_cols=114 Identities=8% Similarity=0.042 Sum_probs=75.8
Q ss_pred CCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCc---------
Q psy18074 35 SAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN--------- 100 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~--------- 100 (197)
..+..+.|||||++|+.++.+ ..|++||+.+++.+... .+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~--~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE--LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE--EEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc--CCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 368899999999999876543 36999999998865432 11122367899999 99887766543
Q ss_pred -----EEEEEcCCCcee--eeeccccccccccccccceecccCcccceeeeecC------cceEEeecch
Q psy18074 101 -----LRVWKAHASEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ------VPRHIYNAQA 157 (197)
Q Consensus 101 -----i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------~~~~i~~~~~ 157 (197)
|++|++.+++.. ..+..... ...+..+.|||||++|+.... ..+.+|++..
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~------~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPEL------PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTC------TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCC------CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 889998776532 12221111 012468899999998884332 2456777654
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.90 E-value=2.4e-07 Score=69.03 Aligned_cols=111 Identities=6% Similarity=-0.130 Sum_probs=79.4
Q ss_pred CccEEEEEcC--CC---cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEECCCC
Q psy18074 2 EAFVFTAANE--DF---NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~--d~---~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~v~i~d~~~~ 66 (197)
++..+.+... .. .|.+||..+ .+.+..+.....+ .+.++|||++++.+. .++.|.+||..+.
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t-~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGS-GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCC-CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 4555555543 33 789999987 4556666543344 999999999998875 3678999999987
Q ss_pred cccceeecc------cccceeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeee-ec
Q psy18074 67 HSRDIYHTK------RMQHVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGY-VN 116 (197)
Q Consensus 67 ~~~~~~~~~------~~~~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~-~~ 116 (197)
+.......+ +......++|+|||++|+.+.. ++.|.++| .+++.+.. +.
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 765554322 0124568999999999997764 57899999 98887766 54
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.86 E-value=9.7e-08 Score=68.86 Aligned_cols=144 Identities=9% Similarity=0.099 Sum_probs=92.3
Q ss_pred CccEEEEEcCC---------------CcEEEEEccCCCCceeecccCCCCeEEEEEC----CCCCEEEEE-eCCCcEEEE
Q psy18074 2 EAFVFTAANED---------------FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS----PTGREFVAG-GYDKSLRLY 61 (197)
Q Consensus 2 ~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~-~~d~~v~i~ 61 (197)
+|+++++...+ +.|..||.. +... .+..+......++|+ |++..++.+ ..++.|.+|
T Consensus 127 ~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~ 203 (314)
T 1pjx_A 127 EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSY 203 (314)
T ss_dssp TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEE
T ss_pred CCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEE
Confidence 56677766544 456666654 3322 222333456889999 999766554 567899999
Q ss_pred ECC-CCcccc--ee--ecccc-cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceeccc
Q psy18074 62 LAH-QGHSRD--IY--HTKRM-QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAH 135 (197)
Q Consensus 62 d~~-~~~~~~--~~--~~~~~-~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (197)
+.. ++.... .+ ...+. ..+..++++++|+++++...++.|.+||..+++.+..+..+. ..+.++++
T Consensus 204 ~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~--------~~~~~i~~ 275 (314)
T 1pjx_A 204 DIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF--------EKPSNLHF 275 (314)
T ss_dssp EEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS--------SCEEEEEE
T ss_pred ECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC--------CCceeEEE
Confidence 986 443211 11 11222 457889999999988887778899999998776655443322 22578999
Q ss_pred CcccceeeeecC--cceEEeecc
Q psy18074 136 HPQIRRIARHRQ--VPRHIYNAQ 156 (197)
Q Consensus 136 s~~~~~l~~~~~--~~~~i~~~~ 156 (197)
+|+++.|..+.. ..+..|+..
T Consensus 276 ~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 276 KPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CTTSSEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEeCCCCeEEEEeCC
Confidence 999985543332 366666654
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.86 E-value=5.9e-07 Score=64.14 Aligned_cols=143 Identities=8% Similarity=-0.054 Sum_probs=95.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-ecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+|.++++...++.|.+||.. +.... .+......+.++++++++..+++...++.|..||.. +.............+
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~ 106 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS--GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGP 106 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT--SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred CCCEEEEcCCCCeEEEECCC--CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCC
Confidence 57788887778889999976 22222 223334678999999999877776667889999988 554322212223578
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeec
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNA 155 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~ 155 (197)
..+++.++|+++++...++.|..+|.. ++......... ...+..+++.++|+..++.. ...+..++.
T Consensus 107 ~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK-------GSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSST-------TCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred ccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC-------CCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 999999999988887778889999987 55432211111 11256788888888665554 335556654
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.85 E-value=5.6e-07 Score=67.05 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=46.9
Q ss_pred CccEEEEEc----------CCCcEEEEEccCCCCceeecccC-------CCCeEEEEECCCCCEEEEEeC--CCcEEEEE
Q psy18074 2 EAFVFTAAN----------EDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLRLYL 62 (197)
Q Consensus 2 ~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~-------~~~v~~~~~sp~~~~l~~~~~--d~~v~i~d 62 (197)
||+.++++. .++.|.+||..+ .+.+..+.-. ......+.|+|+|++|++++. +..|.++|
T Consensus 76 Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD 154 (373)
T 2mad_H 76 SGSEFALASTSFSRIAKGKRTDYVEVFDPVT-FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV 154 (373)
T ss_pred CCCEEEEEeccccccccCCCCCeEEEEECCC-CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE
Confidence 677777765 367899999976 3444443221 123458899999999998874 47899999
Q ss_pred CCCCcccce
Q psy18074 63 AHQGHSRDI 71 (197)
Q Consensus 63 ~~~~~~~~~ 71 (197)
.+++....
T Consensus 155 -~t~~~~~~ 162 (373)
T 2mad_H 155 -QGGSSDDQ 162 (373)
T ss_pred -CCCCEEeE
Confidence 87765443
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.83 E-value=4.5e-08 Score=79.19 Aligned_cols=144 Identities=8% Similarity=0.037 Sum_probs=87.1
Q ss_pred CCccEEEEEcCC-----CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCc--------------EEEE
Q psy18074 1 MEAFVFTAANED-----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS--------------LRLY 61 (197)
Q Consensus 1 ~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~--------------v~i~ 61 (197)
.||+.|+.+..+ ..|++||+.+ +..+.. ..+...+..++|+|| +.|+.++.++. |++|
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~t-g~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~ 248 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVAD-GKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLH 248 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTT-CCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCC-CCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEE
Confidence 377877766443 3599999986 343322 111122357899999 98888776554 8999
Q ss_pred ECCCCcccc--eee-cccccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCC--ceeeeeccccccccccccccce
Q psy18074 62 LAHQGHSRD--IYH-TKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS--EKLGYVNNKQRQALDYSESLKQ 131 (197)
Q Consensus 62 d~~~~~~~~--~~~-~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~v~ 131 (197)
++.++.... .+. ..+...+..+.|+|||++|+..+.+ ..|++||+.++ +....+...... +.
T Consensus 249 ~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--------~~ 320 (741)
T 1yr2_A 249 RLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA--------QW 320 (741)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS--------CE
T ss_pred ECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc--------eE
Confidence 998765322 221 1222358899999999998866543 37999999876 313334333221 12
Q ss_pred ecccCcccceeeeecC-c----ceEEeecc
Q psy18074 132 KYAHHPQIRRIARHRQ-V----PRHIYNAQ 156 (197)
Q Consensus 132 ~~~~s~~~~~l~~~~~-~----~~~i~~~~ 156 (197)
.. ++|+|..|+.... . .+.+|++.
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 22 3477877764332 1 25555554
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.82 E-value=8.6e-07 Score=63.28 Aligned_cols=141 Identities=4% Similarity=-0.088 Sum_probs=91.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-ecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
+++++++...++.|..||.. +.... .+......+.+++++++|..+++....+.|..|+. ++.........+...+
T Consensus 156 ~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 232 (300)
T 2qc5_A 156 DNALWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARP 232 (300)
T ss_dssp TSSEEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred CCCEEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCc
Confidence 56777777667889999883 33222 22233456889999999987776666778999998 4544333222234668
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEee
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYN 154 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~ 154 (197)
.+++++++|+.+++...++.|..||. ++... .+..... ...+.++++.++|++.++... .+..++
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~------~~~~~~i~~~~~g~l~v~~~~-~i~~~~ 297 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTE------NAEPHGITFGKDGSVWFALKC-KIGKLN 297 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECCST------TCCCCCEEECTTSCEEEECSS-EEEEEE
T ss_pred eEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECCcc------CCccceeEeCCCCCEEEEccC-ceEEeC
Confidence 89999999997777666789999998 44432 2211100 122578888999987766553 444443
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.82 E-value=2.5e-07 Score=66.84 Aligned_cols=141 Identities=9% Similarity=0.025 Sum_probs=92.4
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceee--cc-cc
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH--TK-RM 77 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~--~~-~~ 77 (197)
+|+ +++++..++.|..|+.. +. ...+......+.+++++++|+.+++...++.|..|+.. +....... .+ ..
T Consensus 55 ~g~~l~~~d~~~~~i~~~~~~--g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~ 130 (305)
T 3dr2_A 55 AQRTLVWSDLVGRRVLGWRED--GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRL 130 (305)
T ss_dssp GGTEEEEEETTTTEEEEEETT--SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEEC
T ss_pred CCCEEEEEECCCCEEEEEeCC--CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCcc
Confidence 455 77888888999999874 33 44455556778999999999977666666789999986 55332221 11 12
Q ss_pred cceeEEEEccCCCEEEE----EeC-------------CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccc
Q psy18074 78 QHVTHTVWSLDNKFVIS----ASD-------------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIR 140 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~----~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 140 (197)
..+..++++|+|+++++ |.. .+.|..||..+++..... ... ....++|+||++
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~--------~p~gl~~spdg~ 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD--------HPNGLAFSPDEQ 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES--------SEEEEEECTTSS
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC--------CCcceEEcCCCC
Confidence 35678999999998886 332 245777777666543322 111 146889999998
Q ss_pred eeeeec-C------cceEEeecc
Q psy18074 141 RIARHR-Q------VPRHIYNAQ 156 (197)
Q Consensus 141 ~l~~~~-~------~~~~i~~~~ 156 (197)
.|.... . ..+.+|+..
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEE
T ss_pred EEEEEecCCcCCCCCEEEEEEec
Confidence 666433 2 345666654
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.81 E-value=5.5e-07 Score=64.80 Aligned_cols=141 Identities=6% Similarity=0.019 Sum_probs=87.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec---cccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT---KRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~---~~~~ 78 (197)
++.++++...++.|+.||... +. ...+ .....+.+++++|+|.++++ . +..|.+||..++........ ....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~-~~-~~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFT-KQ-VQRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNN 98 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTT-CC-EEEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSE
T ss_pred CCEEEEEECCCCEEEEEECCC-Cc-EEEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCC
Confidence 456788888889999999875 22 3333 33578999999999995544 4 56799999988765433211 1124
Q ss_pred ceeEEEEccCCCEEEEEeCC---------CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeee-ec-C
Q psy18074 79 HVTHTVWSLDNKFVISASDE---------MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIAR-HR-Q 147 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~-~ 147 (197)
.++.++++|+|+++++.... ..-.+|.+........+.... .....++|+||++.|.. .. .
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~--------~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV--------DISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE--------SBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc--------ccccceEEcCCCCEEEEecCCC
Confidence 57899999999977654221 223455444222222221111 12468999999986653 33 3
Q ss_pred cceEEeec
Q psy18074 148 VPRHIYNA 155 (197)
Q Consensus 148 ~~~~i~~~ 155 (197)
..+..|+.
T Consensus 171 ~~i~~~~~ 178 (297)
T 3g4e_A 171 YSVDAFDY 178 (297)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEec
Confidence 45666664
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.81 E-value=7.5e-08 Score=72.76 Aligned_cols=102 Identities=8% Similarity=-0.106 Sum_probs=78.9
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEECCCCcccceeecc------c
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGHSRDIYHTK------R 76 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~v~i~d~~~~~~~~~~~~~------~ 76 (197)
+.|.++|+.+ .+.+..+..-..+ .+.++||++++++++ .++.|.++|..+++....+..+ .
T Consensus 99 ~~VsVID~~t-~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGST-GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTT-TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCC-CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 6899999987 4666666654455 899999999888775 3678999999998876665332 0
Q ss_pred ccceeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeeeecc
Q psy18074 77 MQHVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGYVNN 117 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~ 117 (197)
......++|+|||++++.+.. ++.|.+.|+.+++.+..+..
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 134567899999999998764 57899999999988776654
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=6.2e-10 Score=82.91 Aligned_cols=141 Identities=13% Similarity=0.051 Sum_probs=68.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++..+++++.|+.|+.||..+ ++....+.. +.+.+..+.+++..+++++.|+.|+.||..+|+.+..........+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t-G~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT-GSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT-CCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCC-CCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 467788899999999999987 565555554 44545555567777888889999999999988875543111101111
Q ss_pred -EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchh
Q psy18074 82 -HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAE 158 (197)
Q Consensus 82 -~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~ 158 (197)
+..+. ++..+++++.++.++.||..+|+.+..+..+.. ..++|++..++.+. +..+..|+....
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~------------~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA------------DSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC----------------------------------EEEEEEEEEEECCCSSSS
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc------------ccccccCCEEEEEecCCEEEEEECCCC
Confidence 11111 344667788899999999999998876654321 22344555555433 345666665543
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.77 E-value=3.4e-07 Score=65.96 Aligned_cols=102 Identities=10% Similarity=0.058 Sum_probs=73.4
Q ss_pred CCCeEEEEECCCCCEEEE-EeCCCcEEEEEC--CCCccc--ceee--cccccceeEEEEccCCCEEEEEeCCCcEEEEEc
Q psy18074 34 TSAVTSVDYSPTGREFVA-GGYDKSLRLYLA--HQGHSR--DIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA 106 (197)
Q Consensus 34 ~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~--~~~~~~--~~~~--~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~ 106 (197)
......++|+|+++.++. .+.++.|..|++ .++... ..+. ..+...+..++++++|++.++....+.|..||.
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 445689999999987654 556788999987 455432 1121 122356789999999998888777888999999
Q ss_pred CCCceeeeeccccccccccccccceecccC-cccceee
Q psy18074 107 HASEKLGYVNNKQRQALDYSESLKQKYAHH-PQIRRIA 143 (197)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~ 143 (197)
.+++.+..+...... +++++|. |+++.|.
T Consensus 228 ~tG~~~~~i~~p~~~--------~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDK--------TTSCCFGGKNYSEMY 257 (297)
T ss_dssp TTCCEEEEEECSSSB--------EEEEEEESGGGCEEE
T ss_pred CCceEEEEEECCCCC--------ceEEEEeCCCCCEEE
Confidence 888877766544322 5789998 7877654
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.75 E-value=4.8e-07 Score=68.27 Aligned_cols=148 Identities=7% Similarity=0.035 Sum_probs=90.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCC--cEEEEECCCCccccee---eccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--SLRLYLAHQGHSRDIY---HTKR 76 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~v~i~d~~~~~~~~~~---~~~~ 76 (197)
+++++++...++.|+.||+.. +........ ..... ++|+|++..|+.+..++ .|++|+...+...... ....
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~-g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~ 217 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDD-NKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTF 217 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTT-TEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTS
T ss_pred CCCEEEEecCCCcEEEEECCC-CEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchh
Confidence 577888888888999999975 333333333 23334 99999999998888765 7888988765542222 0112
Q ss_pred ccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccce-ecccCcc-cceeeeecC-cceEEe
Q psy18074 77 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQ-KYAHHPQ-IRRIARHRQ-VPRHIY 153 (197)
Q Consensus 77 ~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~-~~~l~~~~~-~~~~i~ 153 (197)
...+.+++++|++..|+.+..++.|+.||..++... .+....... ....... .++|+|+ +.+.++... ..+..|
T Consensus 218 ~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g--~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLELSG--SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCCCS--CCCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccccC--CCCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 356788999995555555777889999999876532 221000000 0000112 8899995 555555443 345555
Q ss_pred ec
Q psy18074 154 NA 155 (197)
Q Consensus 154 ~~ 155 (197)
+.
T Consensus 295 ~~ 296 (409)
T 3hrp_A 295 TP 296 (409)
T ss_dssp CT
T ss_pred ec
Confidence 43
No 212
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.75 E-value=9.2e-08 Score=75.01 Aligned_cols=104 Identities=6% Similarity=-0.046 Sum_probs=79.1
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcC--CCceeeeecccccc
Q psy18074 44 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH--ASEKLGYVNNKQRQ 121 (197)
Q Consensus 44 p~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~ 121 (197)
|.+..+++...++.|.++|..+++.+..+..+ ..+..+.|+|||+++++++.++.|.+||+. +++.+..+.....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~- 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE- 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-
Confidence 33445667778899999999999887776444 467799999999999999999999999996 7777666654333
Q ss_pred ccccccccceecccC----cccceeeeecC--cceEEeecchh
Q psy18074 122 ALDYSESLKQKYAHH----PQIRRIARHRQ--VPRHIYNAQAE 158 (197)
Q Consensus 122 ~~~~~~~~v~~~~~s----~~~~~l~~~~~--~~~~i~~~~~~ 158 (197)
...++|+ |||++++.+.. ..+.+++....
T Consensus 242 --------P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 242 --------ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp --------EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred --------CceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 3688999 69998875443 46678876543
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.72 E-value=1e-06 Score=64.34 Aligned_cols=138 Identities=8% Similarity=-0.066 Sum_probs=87.2
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc---cccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---RMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~~~~ 79 (197)
+.++++...++.|..||... +. ...+. ....+.++.|+|+|..+++. .+ .|++||..++......... ....
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~-~~-~~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLAS-GR-KTVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNR 135 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTT-TE-EEEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEE
T ss_pred CEEEEEECCCCEEEEEECCC-Cc-EEEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCC
Confidence 56777887788999999875 22 33332 34679999999998877654 44 4999999887754332111 1245
Q ss_pred eeEEEEccCCCEEEEEeC------CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec--CcceE
Q psy18074 80 VTHTVWSLDNKFVISASD------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR--QVPRH 151 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~~~ 151 (197)
+..++++|+|+++++... .+.|..++ +++.. .+.... .....++|+|+++.+.... ...+.
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~--------~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADI--------SIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEE--------SSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCC--------cccCCeEEcCCCCEEEEEECCCCEEE
Confidence 889999999997765432 24555555 44432 221111 1246889999998665332 34567
Q ss_pred Eeecc
Q psy18074 152 IYNAQ 156 (197)
Q Consensus 152 i~~~~ 156 (197)
+|+..
T Consensus 205 ~~d~~ 209 (326)
T 2ghs_A 205 RVPLD 209 (326)
T ss_dssp EEEBC
T ss_pred EEEcc
Confidence 77653
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.67 E-value=8.9e-07 Score=63.95 Aligned_cols=123 Identities=7% Similarity=0.033 Sum_probs=76.8
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC------CcEEEEECCCCccc--ceeecccccceeEEE
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD------KSLRLYLAHQGHSR--DIYHTKRMQHVTHTV 84 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------~~v~i~d~~~~~~~--~~~~~~~~~~v~~v~ 84 (197)
+.|+.||..+ +.... +. .......++|+|++..|+.+... +.|+.|++..+... ..+.......+..++
T Consensus 169 ~~v~~~d~~~-g~~~~-~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~ 245 (305)
T 3dr2_A 169 HSVYRLPPDG-SPLQR-MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFC 245 (305)
T ss_dssp EEEEEECSSS-CCCEE-EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEE
T ss_pred CeEEEEcCCC-CcEEE-Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEE
Confidence 4566777654 33222 22 34566889999999988776654 68999998754311 111111224456789
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcce
Q psy18074 85 WSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPR 150 (197)
Q Consensus 85 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 150 (197)
++++|++.++. .+ .|.+|+. .++.+..+..... +.+++|+++++.|..+....+
T Consensus 246 ~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~~---------~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 246 VDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPGT---------ASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp ECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSSC---------CCEEEECTTSCEEEEEETTEE
T ss_pred ECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCCc---------eeEEEEeCCCCEEEEEcCCeE
Confidence 99999955543 44 4999998 4666655543332 478889998876665444433
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.67 E-value=1.8e-09 Score=80.35 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=53.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCC-CeE-EEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS-AVT-SVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~v~-~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++.++++++.|+.|+.||..+ ++....+..+.. .+. +..+. .+..+++++.++.++.||..+|+.+..+... .
T Consensus 48 ~g~~~v~~s~dg~l~a~d~~t-G~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~--~- 122 (369)
T 2hz6_A 48 EEPAFLPDPNDGSLYTLGSKN-NEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA--F- 122 (369)
T ss_dssp --CCEEECTTTCCEEEC------CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------
T ss_pred CCCEEEEeCCCCEEEEEECCC-CceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC--C-
Confidence 456778888999999999976 343333322211 010 00111 3456777888999999999999987765332 1
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeec
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVN 116 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 116 (197)
...++|++..+++++.++.|+.||..+|+.+..+.
T Consensus 123 --~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 123 --ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred --cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 23456788889999999999999999998876654
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.66 E-value=1.1e-06 Score=63.35 Aligned_cols=141 Identities=11% Similarity=0.138 Sum_probs=87.7
Q ss_pred CccEEEE-------EcCCCcEEEEEccCCCCceeeccc-----CCCCeEEEEECCC-CCEEEEEeCCCcEEEEECCCCcc
Q psy18074 2 EAFVFTA-------ANEDFNLYSYDIRQLNSPLNVHKD-----MTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHS 68 (197)
Q Consensus 2 ~~~~l~~-------~~~d~~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~sp~-~~~l~~~~~d~~v~i~d~~~~~~ 68 (197)
++.++++ +..++.|..||..+ +.. ..+.. +...+.+++++++ +..+++. ....|.+||.. +..
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~-g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~ 103 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKT-GKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTF 103 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTT-CCE-EEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCC-CcE-EEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCE
Confidence 5677777 56778899999765 332 22222 3467899999999 6645544 34479999988 665
Q ss_pred cce-eec---ccccceeEEEEccCCCEEEEEeCC---------------CcEEEEEcCCCceeeeecccccccccccccc
Q psy18074 69 RDI-YHT---KRMQHVTHTVWSLDNKFVISASDE---------------MNLRVWKAHASEKLGYVNNKQRQALDYSESL 129 (197)
Q Consensus 69 ~~~-~~~---~~~~~v~~v~~~~~~~~l~~~~~d---------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 129 (197)
... ... .....+.+++++++|+++++...+ +.|..||.. ++...... .. ..
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~--------~~ 173 (314)
T 1pjx_A 104 EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AF--------QF 173 (314)
T ss_dssp EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EE--------SS
T ss_pred EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-CC--------CC
Confidence 333 211 112458899999999988776544 567777765 44322211 11 11
Q ss_pred ceecccC----cccceee-ee-cCcceEEeecc
Q psy18074 130 KQKYAHH----PQIRRIA-RH-RQVPRHIYNAQ 156 (197)
Q Consensus 130 v~~~~~s----~~~~~l~-~~-~~~~~~i~~~~ 156 (197)
...++++ |+++.+. +. ....+.+|+..
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 3678888 9986544 33 34567777754
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=2.4e-06 Score=62.74 Aligned_cols=153 Identities=10% Similarity=0.023 Sum_probs=93.5
Q ss_pred CccEEEEEc--CCCcEEEEEccCCCCceeec-------ccCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEECCCCc
Q psy18074 2 EAFVFTAAN--EDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGY-----DKSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~-------~~~~~~v~~~~~sp~~~~l~~~~~-----d~~v~i~d~~~~~ 67 (197)
+|+++++.. .++.+.+|.+.. +. +..+ ..+...+.++++++++..+++-.. ++.|.+||+.+++
T Consensus 27 ~g~~~v~~~~~~~~~~~l~~~~~-g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~ 104 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPEMQVAELTQ-DG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ 104 (343)
T ss_dssp TSCEEEEECGGGCCSCSEEEEET-TE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE
T ss_pred CCCEEEEeCCCCCCceEEEEECC-CC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe
Confidence 678888853 234244555432 32 2222 234467999999999876665433 5789999999888
Q ss_pred ccceeec-----ccccceeEEEEccCCCEE-EEEe---CCCcEEEEEcCCCceeeeeccccc-----ccccc--------
Q psy18074 68 SRDIYHT-----KRMQHVTHTVWSLDNKFV-ISAS---DEMNLRVWKAHASEKLGYVNNKQR-----QALDY-------- 125 (197)
Q Consensus 68 ~~~~~~~-----~~~~~v~~v~~~~~~~~l-~~~~---~dg~i~vwd~~~~~~~~~~~~~~~-----~~~~~-------- 125 (197)
....+.. .+...+..++++|++..+ ++.. .++.|.+||+.+++....+..+.. ..+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~ 184 (343)
T 2qe8_A 105 LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIG 184 (343)
T ss_dssp EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEE
T ss_pred EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEec
Confidence 6554422 122456899999865554 4544 578899999988776554432110 00000
Q ss_pred --------ccccceecccCcccceeeeecCcceEEeecc
Q psy18074 126 --------SESLKQKYAHHPQIRRIARHRQVPRHIYNAQ 156 (197)
Q Consensus 126 --------~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~ 156 (197)
....+..++|+|+|+.|..+......+|...
T Consensus 185 ~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 185 QPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp CTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred cCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 0123578999999988876654444666654
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.56 E-value=1.1e-06 Score=65.38 Aligned_cols=125 Identities=12% Similarity=0.079 Sum_probs=85.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-Cceeecc---------c-CCCCeEEEEECCCCCEEEEEeC----------CCcEEE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHK---------D-MTSAVTSVDYSPTGREFVAGGY----------DKSLRL 60 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~---------~-~~~~v~~~~~sp~~~~l~~~~~----------d~~v~i 60 (197)
+|.++++. .+|.|++.|+.... .....+. + ..+....++++|++..++.... ...|.+
T Consensus 237 dG~~~~vs-~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPT-YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEB-TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEe-CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 45555544 47899999986421 1111111 0 0123345777999988877643 247999
Q ss_pred EECCCCcccceeecccccceeEEEEccCCC-EEEE-EeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcc
Q psy18074 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVIS-ASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQ 138 (197)
Q Consensus 61 ~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 138 (197)
+|+.+++.+..+..+ ..+..++++||++ +|++ ...++.|.++|..+++.+.++...... ..+.+++|
T Consensus 316 iD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p---------~~l~~s~d 384 (386)
T 3sjl_D 316 LDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG---------PQVITTAD 384 (386)
T ss_dssp EETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS---------CCEEEECC
T ss_pred EECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC---------ceeEECCc
Confidence 999999988887665 4788999999997 6665 455899999999999998887655432 45556655
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.55 E-value=2.7e-06 Score=62.55 Aligned_cols=136 Identities=8% Similarity=0.020 Sum_probs=84.3
Q ss_pred ccEEEEEc---CCCcEEEEEccCCCCceeecccC-----------------------------CCCeEEEEECCCCCEEE
Q psy18074 3 AFVFTAAN---EDFNLYSYDIRQLNSPLNVHKDM-----------------------------TSAVTSVDYSPTGREFV 50 (197)
Q Consensus 3 ~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~-----------------------------~~~v~~~~~sp~~~~l~ 50 (197)
+.++++.. .++.|.+||+.+ +...+.+..| ...+..++|+|+++.|+
T Consensus 132 g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 132 NFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY 210 (343)
T ss_dssp TEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE
T ss_pred CEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEE
Confidence 45566655 678899999875 3333333221 12368899999999888
Q ss_pred EEeCCC-cEEEEECC---CCc-----cccee-ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc
Q psy18074 51 AGGYDK-SLRLYLAH---QGH-----SRDIY-HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120 (197)
Q Consensus 51 ~~~~d~-~v~i~d~~---~~~-----~~~~~-~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 120 (197)
.+..++ .++.++.. .+. ....+ ..++......++++++|+++++...++.|.+||..+++........ .
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-~ 289 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-K 289 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG-G
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC-c
Confidence 877665 55555532 111 00111 1123345678999999999889888999999998556532222111 0
Q ss_pred cccccccccceecccCcccceeeeec
Q psy18074 121 QALDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 121 ~~~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
...+..++|.++++++++..
T Consensus 290 ------~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 290 ------LSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp ------GSCEEEEEECTTSCEEEEEC
T ss_pred ------eecCCeeEECCCCcEEEEeC
Confidence 12257889988887666554
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.54 E-value=9.6e-06 Score=59.17 Aligned_cols=129 Identities=11% Similarity=0.055 Sum_probs=80.7
Q ss_pred CccEEEEEcC------CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEE-eCCCcEEEEECC--CC-ccc--
Q psy18074 2 EAFVFTAANE------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLYLAH--QG-HSR-- 69 (197)
Q Consensus 2 ~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~v~i~d~~--~~-~~~-- 69 (197)
+|.++++... .+.|+.++ + +.. ..+.........++|+|+++.++.+ +.++.|++|++. ++ ...
T Consensus 144 ~G~l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~ 219 (326)
T 2ghs_A 144 SGALWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA 219 (326)
T ss_dssp TSCEEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC
T ss_pred CCCEEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc
Confidence 4666655432 23455555 2 332 2222233456789999999877554 457899999986 55 321
Q ss_pred ceee--cccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccC-cccceee
Q psy18074 70 DIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHH-PQIRRIA 143 (197)
Q Consensus 70 ~~~~--~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~ 143 (197)
..+. ......+..++++++|+++++...++.|.+||. +++.+..+..... .+.+++|+ +++..|.
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~--------~~~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK--------QTTCPAFIGPDASRLL 287 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS--------BEEEEEEESTTSCEEE
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC--------CcEEEEEecCCCCEEE
Confidence 1121 112345788999999998877766788999998 5665555443322 25788998 7876554
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.53 E-value=6.3e-06 Score=62.15 Aligned_cols=151 Identities=5% Similarity=-0.056 Sum_probs=90.3
Q ss_pred CccEEEEEcCCC--cEEEEEccCCCCceeec----ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee---
Q psy18074 2 EAFVFTAANEDF--NLYSYDIRQLNSPLNVH----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--- 72 (197)
Q Consensus 2 ~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~--- 72 (197)
++..++++..++ .|.+|+.... .....+ ......+.+++++|++..|+.+..++.|+.||..++......
T Consensus 181 ~g~~l~~~d~~~~~~I~~~d~~~~-~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~ 259 (409)
T 3hrp_A 181 DKQRVYSIGWEGTHTVYVYMKASG-WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLE 259 (409)
T ss_dssp TSSEEEEEBSSTTCEEEEEEGGGT-TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECC
T ss_pred CCCcEEEEecCCCceEEEEEcCCC-ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccc
Confidence 456677776655 7888887642 222232 213456788999996555666777889999999877543220
Q ss_pred ecccccce-e-EEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeecccc-c-c-----ccccccccceecccCccccee
Q psy18074 73 HTKRMQHV-T-HTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQ-R-Q-----ALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 73 ~~~~~~~v-~-~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~-~-----~~~~~~~~v~~~~~s~~~~~l 142 (197)
..++.... . .++|+|+ +.++++-...+.|+.|+.... ...+.+.. . . .....-.....++++|+|++.
T Consensus 260 ~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly 337 (409)
T 3hrp_A 260 LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY 337 (409)
T ss_dssp CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE
T ss_pred ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE
Confidence 11221222 3 9999995 555556667888999987643 22222221 0 0 000001235789999999866
Q ss_pred eeec-C-cceEEeec
Q psy18074 143 ARHR-Q-VPRHIYNA 155 (197)
Q Consensus 143 ~~~~-~-~~~~i~~~ 155 (197)
++.. . ..+..|+.
T Consensus 338 vad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 338 IVDGFKGYCLRKLDI 352 (409)
T ss_dssp EEETTTTCEEEEEET
T ss_pred EEeCCCCCEEEEEEC
Confidence 6654 3 35666764
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.53 E-value=1.1e-06 Score=70.51 Aligned_cols=129 Identities=9% Similarity=0.006 Sum_probs=88.9
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCC----------C-Ce------------------------EEEEECCCCCE
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMT----------S-AV------------------------TSVDYSPTGRE 48 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~-~v------------------------~~~~~sp~~~~ 48 (197)
.+++.++.+|.++++|..+ ++.+..+.... + ++ ..++++|++..
T Consensus 328 ~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~ 406 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTN-GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGL 406 (677)
T ss_dssp EEEEECCTTSEEEEEETTT-CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTE
T ss_pred eEEEEECCCCEEEEEECCC-CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCE
Confidence 6788899999999999987 44443332110 0 01 14678888887
Q ss_pred EEEEeC-------------------------------------------CCcEEEEECCCCcccceeecccccceeEEEE
Q psy18074 49 FVAGGY-------------------------------------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW 85 (197)
Q Consensus 49 l~~~~~-------------------------------------------d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~ 85 (197)
+++... .+.|..||+.+++.+.....+ ..+....+
T Consensus 407 ~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~ 484 (677)
T 1kb0_A 407 VYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV--SPWNGGTL 484 (677)
T ss_dssp EEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--SSCCCCEE
T ss_pred EEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--CCCcCcce
Confidence 776532 267999999999987776332 34455556
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCccccee
Q psy18074 86 SLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 86 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 142 (197)
..++..++.++.+|.+++||..+++.+..+....... ...+.|..+|+..
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~-------~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV-------AAPSTYMVDGRQY 534 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-------SCCEEEEETTEEE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc-------cCCEEEEeCCEEE
Confidence 7788888889999999999999999998876543211 1344556676533
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=4.7e-06 Score=62.99 Aligned_cols=153 Identities=7% Similarity=-0.008 Sum_probs=96.1
Q ss_pred CccEEEEEcCC------CcEEEEEccCCCCceeecccCC---CCeEEEEECCCCCEEEEEe-------------------
Q psy18074 2 EAFVFTAANED------FNLYSYDIRQLNSPLNVHKDMT---SAVTSVDYSPTGREFVAGG------------------- 53 (197)
Q Consensus 2 ~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l~~~~------------------- 53 (197)
|| +++++..+ +.|.++|..+ .+.+..+..-. ..-..+-|+|+++.+++..
T Consensus 148 dG-i~Vs~~g~~~g~~~g~v~vlD~~T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 148 DA-IYISALGNEEGEGPGGILMLDHYS-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SC-EEEEEEEETTSCSCCEEEEECTTT-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred Ce-EEEEcCCCcCCCCCCeEEEEECCC-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 45 66665554 6799999887 46666664221 2244578899999888874
Q ss_pred CCCcEEEEECCCCcccceeecc-cccceeEEEE--ccCCCEEEEEe------CCCcEEEEEcCCCce--eeee--cccc-
Q psy18074 54 YDKSLRLYLAHQGHSRDIYHTK-RMQHVTHTVW--SLDNKFVISAS------DEMNLRVWKAHASEK--LGYV--NNKQ- 119 (197)
Q Consensus 54 ~d~~v~i~d~~~~~~~~~~~~~-~~~~v~~v~~--~~~~~~l~~~~------~dg~i~vwd~~~~~~--~~~~--~~~~- 119 (197)
.+..|.+||+.+++....+..+ .......+.| +|++++++.++ .+++|.+|....+.- ...+ ....
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 4689999999988766665443 1234556666 99999987655 677888776654321 1111 1100
Q ss_pred cccc-------ccccccceecccCcccceeeeec--CcceEEeecc
Q psy18074 120 RQAL-------DYSESLKQKYAHHPQIRRIARHR--QVPRHIYNAQ 156 (197)
Q Consensus 120 ~~~~-------~~~~~~v~~~~~s~~~~~l~~~~--~~~~~i~~~~ 156 (197)
...+ .........+.+|+||++|..+. ++.+.+|+..
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 0000 00012357888999999887443 3478888875
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.51 E-value=6.5e-07 Score=71.97 Aligned_cols=116 Identities=9% Similarity=0.002 Sum_probs=74.4
Q ss_pred CCCCeEEEEECCCCCEEEEEe-----CCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCC--------
Q psy18074 33 MTSAVTSVDYSPTGREFVAGG-----YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM-------- 99 (197)
Q Consensus 33 ~~~~v~~~~~sp~~~~l~~~~-----~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg-------- 99 (197)
+...+..+.|||||++|+.+. ....|++||+.+++.+...... .....++|+ ||+.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 344688899999999887532 2357999999999864432111 113578999 999998877664
Q ss_pred -----cEEEEEcCCCcee--eeecccc-ccccccccccceecccCcccceeeeec--C---cceEEeecch
Q psy18074 100 -----NLRVWKAHASEKL--GYVNNKQ-RQALDYSESLKQKYAHHPQIRRIARHR--Q---VPRHIYNAQA 157 (197)
Q Consensus 100 -----~i~vwd~~~~~~~--~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~--~---~~~~i~~~~~ 157 (197)
.|++|++.+++.. ..+.... .. .....+.|+|||++|+... . ..+.++++..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~------~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQH------HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGC------CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCC------eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 3999998876532 2222211 11 1135788999999886322 1 2456666543
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.51 E-value=4.3e-06 Score=63.24 Aligned_cols=137 Identities=11% Similarity=0.137 Sum_probs=89.5
Q ss_pred cEEEEEcCCCcEEEEEccCC-C--Cceeecc------c-CCCCeEEEEECCCCCEEEEEeCC------CcEEEEECCCCc
Q psy18074 4 FVFTAANEDFNLYSYDIRQL-N--SPLNVHK------D-MTSAVTSVDYSPTGREFVAGGYD------KSLRLYLAHQGH 67 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~-~--~~~~~~~------~-~~~~v~~~~~sp~~~~l~~~~~d------~~v~i~d~~~~~ 67 (197)
.++++|..++.|+++|+.+. . +....+. . .......+..+|+| .++++..+ +.|.++|..+.+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 35566788899999998632 1 2233331 1 11244567788999 66665444 789999999988
Q ss_pred ccceeecccc--cceeEEEEccCCCEEEEEe-------------------CCCcEEEEEcCCCceeeeeccccccccccc
Q psy18074 68 SRDIYHTKRM--QHVTHTVWSLDNKFVISAS-------------------DEMNLRVWKAHASEKLGYVNNKQRQALDYS 126 (197)
Q Consensus 68 ~~~~~~~~~~--~~v~~v~~~~~~~~l~~~~-------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 126 (197)
.+.....+.. .....+.|+|+++.++++. ....|.+||+.+++.+.++.......
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~---- 251 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR---- 251 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE----
T ss_pred EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC----
Confidence 7766532211 2244578899999988874 46889999999887777665531110
Q ss_pred ccccee--cccCcccceeeeecC
Q psy18074 127 ESLKQK--YAHHPQIRRIARHRQ 147 (197)
Q Consensus 127 ~~~v~~--~~~s~~~~~l~~~~~ 147 (197)
.... ++|+|+++++.....
T Consensus 252 --~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 252 --MALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp --EEEEEEECSSTTCCEEEEEEE
T ss_pred --ccceeEeeECCCCCEEEEEEe
Confidence 0123 456999988775544
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.49 E-value=1.4e-06 Score=64.78 Aligned_cols=102 Identities=6% Similarity=-0.140 Sum_probs=76.5
Q ss_pred cEEEEEcCCC----cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEECCCCccc
Q psy18074 4 FVFTAANEDF----NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGHSR 69 (197)
Q Consensus 4 ~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~v~i~d~~~~~~~ 69 (197)
.++++...++ .|.++|..+ .+.+..+.....+ .+.++|+++.+++++ .++.|.+||+.+++..
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t-~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGC-GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT-TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred eEEEECCccCCccceEEEEECCC-CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 4556655555 788999987 5667777654555 799999999888876 3678999999999887
Q ss_pred ceeeccc------ccceeEEEEccCCCEEEEEeC--CCcEEE--EEcCC
Q psy18074 70 DIYHTKR------MQHVTHTVWSLDNKFVISASD--EMNLRV--WKAHA 108 (197)
Q Consensus 70 ~~~~~~~------~~~v~~v~~~~~~~~l~~~~~--dg~i~v--wd~~~ 108 (197)
..+..+. ......++++|||++++.+.. +..+.+ +|+.+
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 7763320 124678999999999987764 456888 99876
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.49 E-value=1.3e-06 Score=70.32 Aligned_cols=105 Identities=13% Similarity=0.252 Sum_probs=68.6
Q ss_pred CccEEEE-----EcCCCcEEEEEccCCCCceee-cccCCCCeEEEEECCCCCEEEEEeCCC-------------cEEEEE
Q psy18074 2 EAFVFTA-----ANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGYDK-------------SLRLYL 62 (197)
Q Consensus 2 ~~~~l~~-----~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~d~-------------~v~i~d 62 (197)
||++||- |+....|++||+.+ ++.+.. +.. .....++|+ |++.|+.++.+. .|++|+
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~t-g~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVES-KQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTT-CSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred CCCEEEEEEecCCCceEEEEEEECCC-CCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 6777763 33335799999987 343322 211 113567899 999998887764 499999
Q ss_pred CCCCcccc--eeec-c-cccceeEEEEccCCCEEEEEe----CCCcEEEEEcCCCc
Q psy18074 63 AHQGHSRD--IYHT-K-RMQHVTHTVWSLDNKFVISAS----DEMNLRVWKAHASE 110 (197)
Q Consensus 63 ~~~~~~~~--~~~~-~-~~~~v~~v~~~~~~~~l~~~~----~dg~i~vwd~~~~~ 110 (197)
+.++.... .+.. . |.....++.|+|||++|+... ..+.|+++|+.++.
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence 98765422 2211 2 234577899999999986432 23589999997764
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.48 E-value=4.6e-06 Score=59.04 Aligned_cols=151 Identities=9% Similarity=-0.030 Sum_probs=97.0
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccc----cc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR----MQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~----~~ 78 (197)
+.++++.-.++.+.++|..+ .+.+..+......- ..++++|..++++..++.|.++|..+.+.......+. ..
T Consensus 76 ~~lyv~t~~~~~v~viD~~t-~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~ 152 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRT-LSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVI 152 (266)
T ss_dssp TEEEEEETTCSEEEEEETTT-TEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEEecCCEEEEEECCC-CcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccc
Confidence 35666666788999999986 45566664221222 3345578878777778999999999887766653321 12
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc--c---ccccccccceecccCcccceee-eecCc-ceE
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR--Q---ALDYSESLKQKYAHHPQIRRIA-RHRQV-PRH 151 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~---~~~~~~~~v~~~~~s~~~~~l~-~~~~~-~~~ 151 (197)
.++.+.|. +|...+....++.|.+.|+.+++.+..+..... . .-.......+.++|+|+++.+. ++..- .+.
T Consensus 153 ~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 46788887 776556666788999999999998887764310 0 0000012357999999886555 44333 444
Q ss_pred Eeecch
Q psy18074 152 IYNAQA 157 (197)
Q Consensus 152 i~~~~~ 157 (197)
..++..
T Consensus 232 ~i~l~~ 237 (266)
T 2iwa_A 232 EIKLHL 237 (266)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 444433
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.41 E-value=4.6e-06 Score=67.01 Aligned_cols=79 Identities=10% Similarity=-0.041 Sum_probs=56.5
Q ss_pred CcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceeccc
Q psy18074 56 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAH 135 (197)
Q Consensus 56 ~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (197)
|.|..||+.+++.+.....+ .......+...+..++.++.||.++.||..+|+.+..+....... ...+.|
T Consensus 455 g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~-------~~p~ty 525 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM-------AAPVTY 525 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-------SCCEEE
T ss_pred eeEEEEECCCCCeEeEccCC--CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc-------cCceEE
Confidence 77999999999987776332 333444566678889999999999999999999998776543311 134556
Q ss_pred Ccccc-eee
Q psy18074 136 HPQIR-RIA 143 (197)
Q Consensus 136 s~~~~-~l~ 143 (197)
..+|+ +++
T Consensus 526 ~~~G~qyv~ 534 (689)
T 1yiq_A 526 SVDGEQYVT 534 (689)
T ss_dssp EETTEEEEE
T ss_pred EECCEEEEE
Confidence 66765 444
No 230
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.31 E-value=1.1e-05 Score=61.13 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=61.8
Q ss_pred EEEECCCCCEEEEEeC----------CCcEEEEECCCCcccceeecccccceeEEEEccCCC-EEEEEe-CCCcEEEEEc
Q psy18074 39 SVDYSPTGREFVAGGY----------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKA 106 (197)
Q Consensus 39 ~~~~sp~~~~l~~~~~----------d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~-~l~~~~-~dg~i~vwd~ 106 (197)
.++++|++..+++... .+.|.++|+.+.+.+..+..+ .....++|+|||+ ++++.. .++.|.++|+
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 3689999888776542 357999999999988777554 4689999999999 788776 5899999999
Q ss_pred CCCceeeee
Q psy18074 107 HASEKLGYV 115 (197)
Q Consensus 107 ~~~~~~~~~ 115 (197)
.+++.+..+
T Consensus 401 ~t~kvv~tI 409 (426)
T 3c75_H 401 ATGEELRSV 409 (426)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 999988876
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.30 E-value=3.5e-05 Score=54.16 Aligned_cols=138 Identities=8% Similarity=0.048 Sum_probs=90.6
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc---c-ccc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---R-MQH 79 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~-~~~ 79 (197)
.++++.-.++.+.+||..+ .+.+..+.- ...-..++ +++..|+.+..++.|.++|..+.+........ . ...
T Consensus 98 ~ly~ltw~~~~v~v~D~~t-~~~~~ti~~-~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRN-LRQVRSFNY-DGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp EEEEEESSSSEEEEEETTT-CCEEEEEEC-SSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred EEEEEEeeCCEEEEEECcc-CcEEEEEEC-CCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 4555555688899999987 456666643 22223444 47777877777788999999988776665321 1 134
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccccc--c--cccccccceecccCcccceeeeec
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ--A--LDYSESLKQKYAHHPQIRRIARHR 146 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~--~~~~~~~v~~~~~s~~~~~l~~~~ 146 (197)
++.+.|. +|+..+....++.|.+.|..+++.+..+....-. . .....+..+.++|+|+++.|....
T Consensus 174 lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 174 LNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 5567776 7776666667889999999999998877543110 0 011123468999999776665433
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.27 E-value=4.5e-05 Score=53.06 Aligned_cols=139 Identities=6% Similarity=0.092 Sum_probs=91.6
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc-c---cc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-R---MQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~---~~ 78 (197)
+.++...-.++.+.+||..+ .+.+..+.. .+.-..++ +++..|+.+..++.|.++|..+......+... + ..
T Consensus 75 ~~ly~ltw~~~~v~v~D~~t-l~~~~ti~~-~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLAT-LTPRARFRY-PGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp TEEEEEESSSSEEEEEETTT-TEEEEEEEC-SSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEEeeCCEEEEEECCc-CcEEEEEeC-CCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 34556666788999999987 456666643 22334555 46777777777899999999988776655322 1 13
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc--ccc---ccccccceecccCcccceee-eec
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR--QAL---DYSESLKQKYAHHPQIRRIA-RHR 146 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~---~~~~~~v~~~~~s~~~~~l~-~~~ 146 (197)
.++.+.|. +|+..+....+..|.+.|..+++.+..+....- ... ....+..+.++++|+++.|. +|-
T Consensus 151 ~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 151 NLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 45667765 677666666788999999999998887764321 000 11234568999999765554 543
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.26 E-value=6.8e-05 Score=52.79 Aligned_cols=138 Identities=8% Similarity=0.010 Sum_probs=92.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc-c---cc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-R---MQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~---~~ 78 (197)
..++++.-.++.+.+||..+ .+.+..+.. ...-..++ +++..|+.+..++.|.++|..+.+....+... + ..
T Consensus 106 ~~Ly~ltw~~~~v~V~D~~T-l~~~~ti~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~ 181 (268)
T 3nok_A 106 ERLYQLTWTEGLLFTWSGMP-PQRERTTRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVE 181 (268)
T ss_dssp SCEEEEESSSCEEEEEETTT-TEEEEEEEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CEEEEEEccCCEEEEEECCc-CcEEEEEeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccc
Confidence 35556666788999999987 456666643 22224444 47888888878999999999988776655221 1 12
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccccc--c---cccccccceecccCcccceee-ee
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ--A---LDYSESLKQKYAHHPQIRRIA-RH 145 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~---~~~~~~~v~~~~~s~~~~~l~-~~ 145 (197)
.++.+.|. +|+..+....++.|.+.|..+++.+..+....-. . .....+..+.++|+|+++.|. +|
T Consensus 182 ~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 182 LINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 45677776 7776666667889999999999988877643110 0 011123468999999765554 44
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.25 E-value=4.4e-05 Score=53.74 Aligned_cols=149 Identities=9% Similarity=-0.033 Sum_probs=92.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.++.+.+.+|.|+.+|+.+ ++....+....-.-..+++.. +..++....++.+.+||..+.+.+..+.... .-.
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~T-gkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~--eGw 139 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLES-AQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSG--EGW 139 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSC-SSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSS--CCC
T ss_pred CCEEEEEcCCCCEEEEEECCC-CcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCC--cee
Confidence 356778888889999999987 455555422111223455542 2344445578999999999998887774432 223
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecchhhH
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQAEHR 160 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~~~~~ 160 (197)
.+ +++++.|+.+..++.|.++|..+.+.+..+........ -..++.+.|. +|+..+... .+.+.+.+....+.
T Consensus 140 GL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~---v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 140 GL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP---VELINELECA-NGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp CE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE---CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBE
T ss_pred EE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc---cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcE
Confidence 34 35788888777789999999999888877654332100 0012445555 666555443 34566666655443
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.25 E-value=2.3e-05 Score=61.26 Aligned_cols=132 Identities=7% Similarity=-0.062 Sum_probs=85.5
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCC-----------------------------------
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK----------------------------------- 56 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----------------------------------- 56 (197)
++.+.+.|..+. +....+.- .+....++++|+|.++++.+.+.
T Consensus 174 ~~~vtvID~~t~-~v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 174 VNVFTAVDADKW-EVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEEETTTT-EEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred CceEEEEECCCC-eEEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 456888888763 44444432 12456788999999998877442
Q ss_pred ---cEEEEECCC--Ccc-cceeecccccceeEEEEccCCCEEEE-EeCCCcEEEEEcCCCc------------eeeeecc
Q psy18074 57 ---SLRLYLAHQ--GHS-RDIYHTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASE------------KLGYVNN 117 (197)
Q Consensus 57 ---~v~i~d~~~--~~~-~~~~~~~~~~~v~~v~~~~~~~~l~~-~~~dg~i~vwd~~~~~------------~~~~~~~ 117 (197)
.|.+.|..+ +.. +..+..+ ....++.++|||++++. +..+..|.++|+.+.+ ....+..
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred EECcEEEEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 477777776 433 2333232 45678999999999875 4568899999998653 1222222
Q ss_pred ccccccccccccceecccCcccceee-ee-cCcceEEeecch
Q psy18074 118 KQRQALDYSESLKQKYAHHPQIRRIA-RH-RQVPRHIYNAQA 157 (197)
Q Consensus 118 ~~~~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~~~~i~~~~~ 157 (197)
.. ....++|+|+| .+. +. -+..+..|+...
T Consensus 330 G~---------gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GL---------GPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CS---------CEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CC---------CcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 22 24788999999 443 33 345788898765
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.23 E-value=0.00042 Score=48.79 Aligned_cols=144 Identities=6% Similarity=0.010 Sum_probs=84.3
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++++-..++.|..+++.. ......+.........++++|++..++. -...+.|.++++......... ........
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~ 125 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHG-GEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLVNPR 125 (267)
T ss_dssp TEEEEEETTTTEEEEEESSS-CCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSSEE
T ss_pred CEEEEEECCCCEEEEEecCC-CCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-ECCCCCcc
Confidence 45666776778899999874 2322223222356789999997665554 455678999998744322222 21224678
Q ss_pred EEEEccCCCEEEEEeC---CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC--cceEEeecc
Q psy18074 82 HTVWSLDNKFVISASD---EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ--VPRHIYNAQ 156 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~~~i~~~~ 156 (197)
.++++|++..|+.+.. .+.|..+++.. .....+.... ......+++++++..|..... ..+..++..
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~-------~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDN-------LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTT-------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECC-------CCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 9999997666554443 36788888753 2222221110 012468889987665543332 345555543
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.21 E-value=4.1e-05 Score=55.38 Aligned_cols=133 Identities=11% Similarity=-0.007 Sum_probs=85.3
Q ss_pred EEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEE
Q psy18074 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTV 84 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~ 84 (197)
.+..++.++.|..+|.. +............+.++...+++. ++.++.++.|+.+|.. +........ ....+.++.
T Consensus 109 ~l~v~t~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~ 183 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD--GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAAS 183 (330)
T ss_dssp EEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCE
T ss_pred EEEEEecCCEEEEEcCC--CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeE
Confidence 45667778889999987 344444444444566667776666 5567778899999998 766555432 234567777
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEee
Q psy18074 85 WSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYN 154 (197)
Q Consensus 85 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~ 154 (197)
..+++..++.. +.+..+| .+++.......... .+.++...++|...+...+..+..++
T Consensus 184 ~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~--------~~~~~~~~~~g~l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 184 IGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYW--------TVTRPAISEDGTIYVTSLDGHLYAIN 241 (330)
T ss_dssp ECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSC--------CCSCCEECTTSCEEEEETTTEEEEEC
T ss_pred EcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCc--------ceeceEECCCCeEEEEcCCCeEEEEC
Confidence 77788765544 7799999 66766655443221 24566777777666655545555554
No 238
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.00013 Score=55.43 Aligned_cols=140 Identities=5% Similarity=-0.031 Sum_probs=81.0
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC-C----cEEEEECCCCccc--ceeecc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K----SLRLYLAHQGHSR--DIYHTK 75 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~----~v~i~d~~~~~~~--~~~~~~ 75 (197)
+.++++-.. +.|+.+|+.. ..+..+.........++|++++..|+.+... + .+..++. .+... ..+..
T Consensus 150 g~Lyv~d~~-~~I~~id~~~--~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~- 224 (430)
T 3tc9_A 150 NHLYLVGEQ-HPTRLIDFEK--EYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK- 224 (430)
T ss_dssp EEEEEEEBT-EEEEEEETTT--TEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-
T ss_pred CeEEEEeCC-CcEEEEECCC--CEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-
Confidence 444444433 6788888874 2333443445668899999999966665542 2 2333443 33322 12211
Q ss_pred cccceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecC--cceEE
Q psy18074 76 RMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ--VPRHI 152 (197)
Q Consensus 76 ~~~~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~~~i 152 (197)
......++++| ++..+++-...+.|..++...+........... .....++|+|+|++|..... ..+..
T Consensus 225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~-------~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS-------GWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS-------SCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC-------CcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 24567889999 677666666778999999876554222111110 12468999999985553332 34444
Q ss_pred eec
Q psy18074 153 YNA 155 (197)
Q Consensus 153 ~~~ 155 (197)
++.
T Consensus 297 ~~~ 299 (430)
T 3tc9_A 297 SDY 299 (430)
T ss_dssp EEE
T ss_pred EeC
Confidence 443
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.21 E-value=4.2e-05 Score=56.79 Aligned_cols=79 Identities=10% Similarity=0.025 Sum_probs=61.9
Q ss_pred EEECCCCCEEEEEeC---------CCcEEEEECCCCcccceeecccccceeEEEEccCCCE-EEEEe-CCCcEEEEEcCC
Q psy18074 40 VDYSPTGREFVAGGY---------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF-VISAS-DEMNLRVWKAHA 108 (197)
Q Consensus 40 ~~~sp~~~~l~~~~~---------d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-l~~~~-~dg~i~vwd~~~ 108 (197)
+.++|++..++.+.. +..+.++|+.+++.+..+..+ .....++|+|||++ +++.. .++.|.++|+.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 689999998876543 235669999999887776554 36899999999985 55666 599999999999
Q ss_pred Cceeeeeccccc
Q psy18074 109 SEKLGYVNNKQR 120 (197)
Q Consensus 109 ~~~~~~~~~~~~ 120 (197)
++.+..+.....
T Consensus 347 ~kvv~~I~vg~~ 358 (368)
T 1mda_H 347 DQDQSSVELDKG 358 (368)
T ss_dssp CEEEEECCCCSC
T ss_pred CcEEEEEECCCC
Confidence 999888765543
No 240
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.20 E-value=8.8e-05 Score=58.03 Aligned_cols=147 Identities=7% Similarity=0.037 Sum_probs=96.5
Q ss_pred CccEEEEEc-CCCcEEEEEccCCCCceeeccc-CCCCeEEEEE-C-CCCCEEEEEe------------------CCCcEE
Q psy18074 2 EAFVFTAAN-EDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDY-S-PTGREFVAGG------------------YDKSLR 59 (197)
Q Consensus 2 ~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~-s-p~~~~l~~~~------------------~d~~v~ 59 (197)
||.++.... .++.|.+.|+.+. +....+.- .......+++ + |++.++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 556665544 4556999999873 54443321 1245778887 5 9999998874 345788
Q ss_pred EEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCC--------------------------------------cE
Q psy18074 60 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--------------------------------------NL 101 (197)
Q Consensus 60 i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg--------------------------------------~i 101 (197)
+.|..+.+.......+ +....++++|+|+++++.+.+. .|
T Consensus 179 vID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999988776666443 2456788999999998776443 35
Q ss_pred EEEEcCC--Cce-eeeeccccccccccccccceecccCcccceeeeec--CcceEEeecchhhH
Q psy18074 102 RVWKAHA--SEK-LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR--QVPRHIYNAQAEHR 160 (197)
Q Consensus 102 ~vwd~~~--~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~~~i~~~~~~~~ 160 (197)
.|.|..+ +.. +..+.... ...++.++|||+++.... ...+.+++..+.+.
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~---------~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~ 311 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIAN---------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDA 311 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEES---------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHH
T ss_pred EEEeCcccCCceeEEEEecCC---------CceEEEEcCCCCEEEEeCCCCCeEEEEECccccc
Confidence 5666655 322 22232221 247899999999887554 34778998876543
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.19 E-value=0.00016 Score=53.50 Aligned_cols=136 Identities=11% Similarity=-0.022 Sum_probs=84.7
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEE
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT 83 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v 83 (197)
..++.++.++.+..+|..+ ++...... ......+.. ++..++.++.++.|..+|..+++.+.............+
T Consensus 240 ~~v~~~~~~g~l~~~d~~t-G~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRS-GQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp TEEEEECTTSCEEEEETTT-CCEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCC
T ss_pred CEEEEEecCcEEEEEECCC-CcEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCC
Confidence 4566667788999999986 44443332 223444444 467788888899999999999987665431111222223
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEee
Q psy18074 84 VWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYN 154 (197)
Q Consensus 84 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~ 154 (197)
.. .+..++.++.+|.+..+|..+++.+......... +.......++..++...++.+..|+
T Consensus 315 ~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~--------~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 315 VL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSG--------FQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTC--------BCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred EE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCc--------ceeCCEEECCEEEEEeCCCEEEEEe
Confidence 22 2567888888999999999999987766542221 1111111355555555555666654
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.19 E-value=9.1e-05 Score=52.41 Aligned_cols=149 Identities=9% Similarity=-0.056 Sum_probs=92.4
Q ss_pred CccEEEEEcC--CCcEEEEEccCCCCceeeccc-CCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeecccc
Q psy18074 2 EAFVFTAANE--DFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRM 77 (197)
Q Consensus 2 ~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~ 77 (197)
|+.++++.+. ++.|.++|+.+ ++.+..+.- .......+++. +..++ +...++.+.++|..+.+.+..+..+ .
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~t-g~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~ 106 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQT-GKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M 106 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTT-CCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC-S
T ss_pred CCeEEEECCCCCCCEEEEEECCC-CCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEECC-C
Confidence 3556666543 57899999987 465655432 12223355554 44554 4557889999999998887776433 1
Q ss_pred cceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 78 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
.. ...+++||+.++.+..++.|.++|..+.+.+..+........ -..++.+.|. +|...+... .+.+.+.+..
T Consensus 107 ~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p---~~~~nele~~-dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 107 KD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR---VIRLNELEYI-NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp SS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE---CCCEEEEEEE-TTEEEEEETTSSEEEEEETT
T ss_pred CC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc---cccceeEEEE-CCEEEEecCCCCeEEEEECC
Confidence 11 233566888777776789999999999887777654322100 0013456666 665555443 4567777776
Q ss_pred hhhH
Q psy18074 157 AEHR 160 (197)
Q Consensus 157 ~~~~ 160 (197)
..+.
T Consensus 181 tg~V 184 (266)
T 2iwa_A 181 DGTL 184 (266)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 5544
No 243
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.16 E-value=2.9e-05 Score=61.06 Aligned_cols=63 Identities=11% Similarity=0.001 Sum_probs=45.9
Q ss_pred CCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccc
Q psy18074 55 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQ 119 (197)
Q Consensus 55 d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 119 (197)
++.|..||+.+++.+...... ..+....+...+..++.++.|+.++.||..+|+.+..+....
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 478999999999887765332 223333333456677788999999999999999998776543
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.15 E-value=4.5e-05 Score=53.58 Aligned_cols=148 Identities=7% Similarity=-0.009 Sum_probs=90.5
Q ss_pred CccEEEEEcCCC--cEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECCCCcccceeeccccc
Q psy18074 2 EAFVFTAANEDF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 2 ~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
++.++.+.+.+| .|+.+|+.+ ++....+.- ..........+++..|+. ...++.+.+||..+.+.+..+..+.
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~T-gkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-- 127 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIES-GKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-- 127 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTT-CCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CCEEEEECCCCCCceEEEEECCC-CcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC--
Confidence 456677776665 899999987 555555543 223322222334555554 4468899999999998887774432
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc-cccccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR-QALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
....+++++..|+.+..++.|.++|..+.+.+..+..... ..+ ..++.+.|. +|+..+... .+.+.+.+..
T Consensus 128 --eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~----~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 128 --EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEEL----PELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp --CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEEC----CCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred --CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccc----cccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 2233446777777666688899999999888777654321 110 012345554 666555443 3456666665
Q ss_pred hhhH
Q psy18074 157 AEHR 160 (197)
Q Consensus 157 ~~~~ 160 (197)
..+.
T Consensus 201 tG~V 204 (262)
T 3nol_A 201 TGKV 204 (262)
T ss_dssp TCBE
T ss_pred CCcE
Confidence 5543
No 245
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.14 E-value=5.8e-05 Score=61.30 Aligned_cols=105 Identities=8% Similarity=0.067 Sum_probs=65.0
Q ss_pred CccEEEEE-cCC----CcEEEEEccCCCCce-eecccCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCccc-
Q psy18074 2 EAFVFTAA-NED----FNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSR- 69 (197)
Q Consensus 2 ~~~~l~~~-~~d----~~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~~- 69 (197)
||+.||-+ ..+ ..|+++|+.+....+ ..+. .....+.|+|||+.|+....+ ..|+++++.++...
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~ 261 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSED 261 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGC
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhc
Confidence 67666533 222 249999998630211 1111 123468899999988776654 36888888776533
Q ss_pred -ceeecccccceeEEEEccCCCEEEEEe---CCCcEEEEEcCCC
Q psy18074 70 -DIYHTKRMQHVTHTVWSLDNKFVISAS---DEMNLRVWKAHAS 109 (197)
Q Consensus 70 -~~~~~~~~~~v~~v~~~~~~~~l~~~~---~dg~i~vwd~~~~ 109 (197)
..+..........+.|+|||++|+..+ ....|.++|+.++
T Consensus 262 ~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 262 VCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 222222224567889999999988544 2446888898765
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.12 E-value=0.00026 Score=51.34 Aligned_cols=144 Identities=7% Similarity=0.003 Sum_probs=84.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeeccc--------------------CCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKD--------------------MTSAVTSVDYSPTGREFVAGGYDKSLRLY 61 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--------------------~~~~v~~~~~sp~~~~l~~~~~d~~v~i~ 61 (197)
++.++.++..++.|..||... .. ...+.. ....+.+++++++...|+.+...+.+..+
T Consensus 29 ~g~~l~v~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~ 106 (322)
T 2fp8_A 29 TNKGFYTSVQDGRVIKYEGPN-SG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVV 106 (322)
T ss_dssp TCSSEEEECTTSEEEEECCTT-TC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEE
T ss_pred CCCEEEEEcCCCeEEEECCCC-Cc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEE
Confidence 566677788888999998764 22 222210 01357889999833345555445558888
Q ss_pred ECCCCcccceee--c-ccccceeEEEEcc-CCCEEEEEeC-----------------CCcEEEEEcCCCceeeeeccccc
Q psy18074 62 LAHQGHSRDIYH--T-KRMQHVTHTVWSL-DNKFVISASD-----------------EMNLRVWKAHASEKLGYVNNKQR 120 (197)
Q Consensus 62 d~~~~~~~~~~~--~-~~~~~v~~v~~~~-~~~~l~~~~~-----------------dg~i~vwd~~~~~~~~~~~~~~~ 120 (197)
|..++....... . .....+..+++.+ +|+..++-.. ++.|..||..+++.........
T Consensus 107 d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~- 185 (322)
T 2fp8_A 107 GSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH- 185 (322)
T ss_dssp CTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES-
T ss_pred eCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc-
Confidence 877554322111 1 1113578899999 9987766432 3678888887665432221111
Q ss_pred cccccccccceecccCcccceeeee-c-CcceEEeecc
Q psy18074 121 QALDYSESLKQKYAHHPQIRRIARH-R-QVPRHIYNAQ 156 (197)
Q Consensus 121 ~~~~~~~~~v~~~~~s~~~~~l~~~-~-~~~~~i~~~~ 156 (197)
....++++|+++.|... . ...+..|+..
T Consensus 186 --------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 186 --------VPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp --------CCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred --------cCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 13678999998755433 2 3456666654
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.08 E-value=0.0011 Score=46.71 Aligned_cols=106 Identities=4% Similarity=-0.028 Sum_probs=67.1
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEECCCCcccceeecccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
+.++++-...+.|.++++.. ................++++|++..|+.+.. .+.|..+++.... ...+.......
T Consensus 91 ~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~ 168 (267)
T 1npe_A 91 RTIFWTDSQLDRIEVAKMDG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGL 168 (267)
T ss_dssp TEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSC
T ss_pred CeEEEEECCCCEEEEEEcCC-CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCC
Confidence 45666666677888888863 2222222222246789999997666655543 4688888876432 22222222346
Q ss_pred eeEEEEccCCCEEE-EEeCCCcEEEEEcCCCc
Q psy18074 80 VTHTVWSLDNKFVI-SASDEMNLRVWKAHASE 110 (197)
Q Consensus 80 v~~v~~~~~~~~l~-~~~~dg~i~vwd~~~~~ 110 (197)
...++++|++..|+ +-...+.|.++|+....
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 78999999877665 44556789999987543
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.06 E-value=0.00016 Score=58.19 Aligned_cols=55 Identities=4% Similarity=-0.020 Sum_probs=35.9
Q ss_pred EEEEEccCCCCceeeccc--CC-------CCeEEEEECCCCC---EEEEEeCCCcEEEEECCCCcccc
Q psy18074 15 LYSYDIRQLNSPLNVHKD--MT-------SAVTSVDYSPTGR---EFVAGGYDKSLRLYLAHQGHSRD 70 (197)
Q Consensus 15 i~i~d~~~~~~~~~~~~~--~~-------~~v~~~~~sp~~~---~l~~~~~d~~v~i~d~~~~~~~~ 70 (197)
|..+|..+ ++..-.+.. |. .++.......+|. .++.++.+|.++++|..+|+.+.
T Consensus 277 v~AlD~~T-G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 277 IVAVNADT-GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEEEETTT-CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEccC-CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEec
Confidence 89999987 454444432 21 1222222222554 68889999999999999998763
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.04 E-value=0.00034 Score=49.16 Aligned_cols=127 Identities=12% Similarity=0.107 Sum_probs=82.5
Q ss_pred ecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy18074 29 VHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 107 (197)
Q Consensus 29 ~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~ 107 (197)
.+.+-...+..++|+|++..|+ +...++.|...|.. +..+..+........-.+++.+++.++++...++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4556667899999999876555 57778899999998 776666533323567889999999887777677889999886
Q ss_pred CCceeeeeccccccc-cccccccceecccCcccceee-eecCcceEEeecc
Q psy18074 108 ASEKLGYVNNKQRQA-LDYSESLKQKYAHHPQIRRIA-RHRQVPRHIYNAQ 156 (197)
Q Consensus 108 ~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~-~~~~~~~~i~~~~ 156 (197)
....+.......-.. ....+.....++|+|.++.|. +....+..||...
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 544221111100000 001122357999999875444 5555577777765
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.01 E-value=0.00018 Score=51.96 Aligned_cols=139 Identities=9% Similarity=-0.028 Sum_probs=81.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
++.+++. + +.|..|| .+ +.....+......+.++...++|. +..++.++.|..++. ++.....+.. ....+.
T Consensus 187 ~g~l~v~-t--~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~-~~~~~~ 258 (330)
T 3hxj_A 187 DGTIYFG-S--DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKT-GKRIES 258 (330)
T ss_dssp TCCEEEE-S--SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEEC-SSCCCS
T ss_pred CCEEEEE-e--CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeC-CCCccc
Confidence 3444443 3 6788888 43 344444444445677788887765 455666777888874 4444443322 223344
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeecchh
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAE 158 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~~ 158 (197)
.+.+.+++. |..++.+|.+..+|. +++.+..+.... ..+.++...++|+..+...++-+.+......
T Consensus 259 ~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~--------~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 259 SPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGS--------WIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp CCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSS--------CCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred cceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCC--------ccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 455655664 556677878999986 566655543322 1245666778888777777666666655433
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.00 E-value=8.2e-05 Score=60.42 Aligned_cols=112 Identities=6% Similarity=0.006 Sum_probs=69.8
Q ss_pred CeEEEEEC-CCCCEEEEEeC-CC----cEEEEECCCC-cccceeecccccceeEEEEccCCCEEEEEeCC-----CcEEE
Q psy18074 36 AVTSVDYS-PTGREFVAGGY-DK----SLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRV 103 (197)
Q Consensus 36 ~v~~~~~s-p~~~~l~~~~~-d~----~v~i~d~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~v 103 (197)
.+....|| |||++|+.+.. +| .|+++|+.++ +.+..... .....++|+|||+.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99998876432 33 5999999988 63221111 124578999999988866554 35788
Q ss_pred EEcCCCcee--eeeccccccccccccccceecccCcccceeeeec--Cc--ceEEeecch
Q psy18074 104 WKAHASEKL--GYVNNKQRQALDYSESLKQKYAHHPQIRRIARHR--QV--PRHIYNAQA 157 (197)
Q Consensus 104 wd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~--~~~i~~~~~ 157 (197)
+++.+++.. ..+..... .....+.|||||++|+... .. .+.++++..
T Consensus 252 ~~lgt~~~~~~lv~~~~~~-------~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNP-------LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp EETTSCGGGCEEEEECCCT-------TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred EECCCCchhcEEEEecCCC-------ceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 888766432 22211111 1135778999999888433 22 345555543
No 252
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.98 E-value=0.00048 Score=47.95 Aligned_cols=146 Identities=7% Similarity=-0.004 Sum_probs=87.1
Q ss_pred ccEEEEEcCC--CcEEEEEccCCCCceeecccCCCC-eEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 3 AFVFTAANED--FNLYSYDIRQLNSPLNVHKDMTSA-VTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 3 ~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
+.++.+.+.. ..|+.+|+.+ ++....+.-.... -..++. .+..|+ ....++.+.+||..+.+.+..+..+.
T Consensus 31 ~~LyestG~~g~S~v~~vD~~t-gkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-- 105 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLET-GRILQRAEVPPPYFGAGIVA--WRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-- 105 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTT-CCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTTEEEEEEECSS--
T ss_pred CEEEEECCCCCCceEEEEECCC-CCEEEEEeCCCCcceeEEEE--eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC--
Confidence 4556666654 4799999987 5655555332221 123444 345554 45578999999999998887774432
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccccc-ccccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ-ALDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
.-..+ .+++..|+.+..++.|.++|..+.+.+..+...... .+ ..++.+.|. +|+..+... .+.+.+.+..
T Consensus 106 ~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~----~~lNeLe~~-~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 106 EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPL----DNLNELEWV-NGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEEC----CCEEEEEEE-TTEEEEEETTTTEEEEECTT
T ss_pred CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccc----ccceeeEEe-CCEEEEEECCCCeEEEEECC
Confidence 22344 456777776667889999999998887766543211 00 012334433 555554332 3455666655
Q ss_pred hhhH
Q psy18074 157 AEHR 160 (197)
Q Consensus 157 ~~~~ 160 (197)
..+.
T Consensus 179 tG~V 182 (243)
T 3mbr_X 179 SGKV 182 (243)
T ss_dssp TCBE
T ss_pred CCCE
Confidence 5443
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.0003 Score=56.53 Aligned_cols=58 Identities=7% Similarity=-0.022 Sum_probs=37.9
Q ss_pred cEEEEEccCCCCceeeccc--CC-------CCeEEEEECCCC---CEEEEEeCCCcEEEEECCCCccccee
Q psy18074 14 NLYSYDIRQLNSPLNVHKD--MT-------SAVTSVDYSPTG---REFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 14 ~i~i~d~~~~~~~~~~~~~--~~-------~~v~~~~~sp~~---~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
.|..+|..+ ++....++. |. .....+....+| ..++.++.+|.++++|..+|+.+...
T Consensus 284 sv~AlD~~T-G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 284 SIVALDPDT-GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EEEEECTTT-CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCC-CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 488888887 444444322 21 122223333467 57888999999999999999876554
No 254
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.95 E-value=0.00032 Score=51.88 Aligned_cols=110 Identities=11% Similarity=0.033 Sum_probs=71.7
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccC---------CCCe-EEEEECCCCCEEEEEeCCCcEEEEECCCCccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDM---------TSAV-TSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~~v-~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
+..+++++.++.|+.||..+ ++....+... ...+ ..+.. ++..++.++.++.|+.+|..+|+.+...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADD-GKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp TTEEEEECTTSEEEEEETTT-CCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccC-CceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 34566777788999999986 4444333321 1222 22222 4667888889999999999999887665
Q ss_pred ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc
Q psy18074 73 HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK 118 (197)
Q Consensus 73 ~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 118 (197)
.... ........ .+..++.++.++.+..+|..+|+.+......
T Consensus 130 ~~~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 130 KVAG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp ECSS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred eCCC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCC
Confidence 3321 11111222 2446777888999999999999988766543
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.93 E-value=0.00016 Score=57.02 Aligned_cols=80 Identities=10% Similarity=0.037 Sum_probs=53.0
Q ss_pred CCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecc
Q psy18074 55 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYA 134 (197)
Q Consensus 55 d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 134 (197)
+|.|.-||+.+++.+...... ..+..-.....+.+++.++.|+.++.||..+|+.+..+....... -..+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~-------a~P~~ 535 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV-------SPPIT 535 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-------SCCEE
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcc-------cCceE
Confidence 578999999999887665332 222221222346678889999999999999999998876543210 12345
Q ss_pred cCcccc-eee
Q psy18074 135 HHPQIR-RIA 143 (197)
Q Consensus 135 ~s~~~~-~l~ 143 (197)
|..+|+ +++
T Consensus 536 y~~~G~qYv~ 545 (582)
T 1flg_A 536 WEQDGEQYLG 545 (582)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 556765 554
No 256
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.81 E-value=0.0028 Score=44.50 Aligned_cols=152 Identities=11% Similarity=0.144 Sum_probs=86.8
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC--ceeecc------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC---CCcccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS--PLNVHK------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH---QGHSRD 70 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~---~~~~~~ 70 (197)
++.++++.-.++.+.++++..... ...... .......+++|+|.+..|+++.......+|.+. .+..+.
T Consensus 80 ~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 80 DNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 456666666778899998764332 111111 123456899999998877776655444444443 111111
Q ss_pred eee------cccccceeEEEEccC-CCEEEEEeCCCcEEEEEcCCCceeeeeccccc-cccccccccceecccCccccee
Q psy18074 71 IYH------TKRMQHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGYVNNKQR-QALDYSESLKQKYAHHPQIRRI 142 (197)
Q Consensus 71 ~~~------~~~~~~v~~v~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l 142 (197)
... ..+...+..++++|. +++++.+.....+..+|.. ++.+..+.-... ..+...-.....++|.++|+..
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly 238 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY 238 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEE
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEE
Confidence 110 112346789999996 4555666777888899976 555544432211 0010001124789999999876
Q ss_pred eeecCcceEEeecc
Q psy18074 143 ARHRQVPRHIYNAQ 156 (197)
Q Consensus 143 ~~~~~~~~~i~~~~ 156 (197)
+++..+ .+|...
T Consensus 239 IvsE~n--~~y~f~ 250 (255)
T 3qqz_A 239 IVSEPN--RFYRFT 250 (255)
T ss_dssp EEETTT--EEEEEE
T ss_pred EEcCCc--eEEEEE
Confidence 676554 555543
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.79 E-value=0.0044 Score=44.51 Aligned_cols=105 Identities=9% Similarity=0.089 Sum_probs=65.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC-C-cEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-K-SLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~-~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++.++++...++.|..||... .....+ .....+.+++++++|+.+++.... + .|..++..++.............
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g--~~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 118 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDG--NQQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIF 118 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTC--CEEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSC
T ss_pred CCCEEEEeCCCCeEEEECCCC--ceEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccc
Confidence 567777777788888888763 322222 224568899999999966654332 2 47777877776543322222233
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHAS 109 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~ 109 (197)
...++..+++..+++-..++.|.++|..++
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 455555565554555556888999987654
No 258
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.76 E-value=0.002 Score=48.92 Aligned_cols=131 Identities=7% Similarity=0.040 Sum_probs=74.2
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCC----C-cEEEEECCCCccc-ceeeccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD----K-SLRLYLAHQGHSR-DIYHTKR 76 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~-~v~i~d~~~~~~~-~~~~~~~ 76 (197)
+.++++-.. +.|+.+|+.. +. +..+........+++++++|. |+.+... . .+..++...+... ..+ ..
T Consensus 153 g~Lyv~D~~-~~I~~id~~~-g~-v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~--~~ 226 (433)
T 4hw6_A 153 DDLYWVGQR-DAFRHVDFVN-QY-VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSL--CN 226 (433)
T ss_dssp CEEEEECBT-SCEEEEETTT-TE-EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEE--EE
T ss_pred CEEEEEeCC-CCEEEEECCC-CE-EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccccc--cc
Confidence 455555443 7888888864 33 334434455689999999999 4444332 1 2333333222110 111 11
Q ss_pred ccceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee
Q psy18074 77 MQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 77 ~~~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
......++++| +|.+.++-..++.|+.+|..++.....+...... .....++|+|++++|...
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~------~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK------GSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC------SSCEEEEECTTSSEEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC------CCcccEEEeCCCCEEEEE
Confidence 24567788999 6776666666788999998866652222111111 012469999999855533
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.76 E-value=0.00027 Score=56.72 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=47.5
Q ss_pred CCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc
Q psy18074 55 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK 118 (197)
Q Consensus 55 d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 118 (197)
+|.|..||+.+++.+...... .......+...+.+++.++.|+.++.||..+++.+..+...
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 377999999999987765332 33333445567888889999999999999999998877654
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.75 E-value=0.0039 Score=45.36 Aligned_cols=151 Identities=8% Similarity=0.029 Sum_probs=92.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCcee-eccc----CC--CCeEEEEE---CCCCCEEEEEe-------------CCCcE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLN-VHKD----MT--SAVTSVDY---SPTGREFVAGG-------------YDKSL 58 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~----~~--~~v~~~~~---sp~~~~l~~~~-------------~d~~v 58 (197)
++.++++.-..+.|..||... +.... .+.+ .. ..+.++.| .|++..+++.. .+..|
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~-~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v 102 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKT-QSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSF 102 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTT-CCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEE
T ss_pred CCEEEEEeccCCEEEEEcCCC-CeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEE
Confidence 366777777899999999874 22222 2222 11 13689999 68877777543 25779
Q ss_pred EEEECC---CCcccceeecc------------cccceeEEEEccCCCEEEEEeCC-CcEEEEEcCCCceeeeeccccccc
Q psy18074 59 RLYLAH---QGHSRDIYHTK------------RMQHVTHTVWSLDNKFVISASDE-MNLRVWKAHASEKLGYVNNKQRQA 122 (197)
Q Consensus 59 ~i~d~~---~~~~~~~~~~~------------~~~~v~~v~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~ 122 (197)
..||+. +++.+...... .......++..++|+..++++.. +.|...+... +....+......
T Consensus 103 ~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~- 180 (334)
T 2p9w_A 103 HSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWESGN- 180 (334)
T ss_dssp EEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEECCCC-
T ss_pred EEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCC-
Confidence 999999 77765544211 11347899999999998888877 7777777653 323222111100
Q ss_pred cccccccceecccCcccceeeeec-CcceEEeecc
Q psy18074 123 LDYSESLKQKYAHHPQIRRIARHR-QVPRHIYNAQ 156 (197)
Q Consensus 123 ~~~~~~~v~~~~~s~~~~~l~~~~-~~~~~i~~~~ 156 (197)
.......+.++++|+|+.|+... .+.+..+++.
T Consensus 181 -~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 181 -GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp -SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred -cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 00011146889999998777543 3345555554
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.73 E-value=0.0044 Score=45.60 Aligned_cols=104 Identities=4% Similarity=-0.055 Sum_probs=62.8
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++++-...+.|+.+++.. ......+.........+++.+.+..| ++-...+.|.+.++..... ..+.........
T Consensus 85 ~~ly~~D~~~~~I~r~~~~g-~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~ 162 (349)
T 3v64_C 85 ELVFWSDVTLDRILRANLNG-SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPR 162 (349)
T ss_dssp TEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEE
T ss_pred cEEEEEeccCCceEEEecCC-CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcc
Confidence 45555655666777777764 22222222223445788888765555 4555667899999875432 222222335678
Q ss_pred EEEEccCCCEEEEE-eCC-CcEEEEEcCC
Q psy18074 82 HTVWSLDNKFVISA-SDE-MNLRVWKAHA 108 (197)
Q Consensus 82 ~v~~~~~~~~l~~~-~~d-g~i~vwd~~~ 108 (197)
.++++|.+..|+.. ... +.|...++..
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 99999976666544 334 6788888763
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.73 E-value=0.00051 Score=54.35 Aligned_cols=62 Identities=11% Similarity=0.010 Sum_probs=43.9
Q ss_pred CCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccc
Q psy18074 55 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNK 118 (197)
Q Consensus 55 d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 118 (197)
.|.|.-||+.+++.+.....+ .....-.+...+..++.++.|+.++.||..+|+.+..+...
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 467888999999877665322 12221112335677778999999999999999999877543
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.72 E-value=0.002 Score=46.57 Aligned_cols=134 Identities=9% Similarity=-0.031 Sum_probs=74.8
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEE-eCCCcEEEEECCCCcc--cceeecccccceeEEEEccCC
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLYLAHQGHS--RDIYHTKRMQHVTHTVWSLDN 89 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~v~i~d~~~~~~--~~~~~~~~~~~v~~v~~~~~~ 89 (197)
+.|..||... +. ...+.........++++|++..|+.+ +..+.|+.|++..... ...+.. ..+ ...+++.++|
T Consensus 165 g~v~~~d~~~-~~-~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 165 GRLIKYDPST-KE-TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADG 240 (322)
T ss_dssp EEEEEEETTT-TE-EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTS
T ss_pred ceEEEEeCCC-CE-EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCC
Confidence 5566677653 22 22221112345679999999866655 5568899999875321 112211 113 7889999999
Q ss_pred CEEEEEeC----------CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee-cCcceEEeecc
Q psy18074 90 KFVISASD----------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH-RQVPRHIYNAQ 156 (197)
Q Consensus 90 ~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~~i~~~~ 156 (197)
+++++... .+.|..+|.. ++.+..+.......+ ..+..+++ .++++.++. ....+..+++.
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~----~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAG----EHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTT----SCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCcc----ccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 87766543 4668888864 665555543321101 12344555 355555443 34466667654
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.67 E-value=0.0046 Score=46.16 Aligned_cols=104 Identities=4% Similarity=-0.038 Sum_probs=62.2
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++++-...+.|+.+++.. ......+.........+++++.+..|+ +-...+.|.+.++..... ..+.........
T Consensus 128 ~~ly~~D~~~~~I~r~~~~g-~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~ 205 (386)
T 3v65_B 128 ELVFWSDVTLDRILRANLNG-SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPR 205 (386)
T ss_dssp TEEEEEETTTTEEEEEETTS-CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEE
T ss_pred CeEEEEeCCCCcEEEEecCC-CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCc
Confidence 45566666667777777764 222222222233456788887655554 445567888888764432 222222335678
Q ss_pred EEEEccCCCEEEEEe-CC-CcEEEEEcCC
Q psy18074 82 HTVWSLDNKFVISAS-DE-MNLRVWKAHA 108 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~-~d-g~i~vwd~~~ 108 (197)
.++++|.+..|+... .. +.|..+++..
T Consensus 206 giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred EEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 999999777666544 33 6788888764
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.65 E-value=0.0078 Score=43.69 Aligned_cols=104 Identities=5% Similarity=0.017 Sum_probs=62.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++.+-...+.|+.+++.........+........++++.+.+..| ++-...+.|.++++..... ..+.........
T Consensus 47 ~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~ 125 (318)
T 3sov_A 47 GLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPR 125 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEE
T ss_pred CEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCcc
Confidence 45566666666777777764211122222223456678888755544 4545677899999875432 222223335678
Q ss_pred EEEEccCCCEEEEEe--CCCcEEEEEcC
Q psy18074 82 HTVWSLDNKFVISAS--DEMNLRVWKAH 107 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~--~dg~i~vwd~~ 107 (197)
.++++|.+..|+... ..+.|...++.
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 999999766666554 25678888775
No 266
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.64 E-value=0.0033 Score=48.46 Aligned_cols=101 Identities=7% Similarity=0.096 Sum_probs=61.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccC----CCCeEEEEE-------CCCCCEEEEEeCCC-------cEEEEECC
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDM----TSAVTSVDY-------SPTGREFVAGGYDK-------SLRLYLAH 64 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~-------sp~~~~l~~~~~d~-------~v~i~d~~ 64 (197)
++++++....+.|++.|+.. ..+..+... ......++| ++++..|+.+...+ .|.+++..
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~--~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~ 229 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKN--RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRN 229 (496)
T ss_dssp EEEEEEEETEEEEEEEETTT--TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECC
T ss_pred CEEEEEECCCCeEEEEECCC--CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecC
Confidence 45666655556688888774 233333221 235889999 99999776665443 26666644
Q ss_pred C-Cccc-----ceeecccccceeEEEEccCC-CEEEEEeCCCcEEEEEcC
Q psy18074 65 Q-GHSR-----DIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAH 107 (197)
Q Consensus 65 ~-~~~~-----~~~~~~~~~~v~~v~~~~~~-~~l~~~~~dg~i~vwd~~ 107 (197)
. +... ..+.. -.....++++|++ .++++-..++.|..+|+.
T Consensus 230 ~~G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 230 ADGTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TTSCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 3 2322 12211 1345678899954 445566677889999987
No 267
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.56 E-value=0.01 Score=44.68 Aligned_cols=128 Identities=10% Similarity=0.060 Sum_probs=77.9
Q ss_pred CcEEEEEccCCCCceeecccC----CCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccc------------ceeecc-
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDM----TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR------------DIYHTK- 75 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~------------~~~~~~- 75 (197)
+.||..++... ..-+.+... ...+..+..||+|.+|+..+ +..|.+..+..+... ..+..+
T Consensus 41 n~iR~~~i~~~-~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 41 NIIRWYNVLTD-SLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TEEEEEETTTC-SSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CEEEEEECCCC-CcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 56676676632 223333221 23578899999999998876 456888888733211 012111
Q ss_pred ----cccceeEEEEccC---CCEEEEEeCCCcEEEEEcCCCc--eeeeecccccc-ccccccccceecccCcccceee
Q psy18074 76 ----RMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE--KLGYVNNKQRQ-ALDYSESLKQKYAHHPQIRRIA 143 (197)
Q Consensus 76 ----~~~~v~~v~~~~~---~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~ 143 (197)
....|..+.|+|- +..|++-..|+.|++||+.... +. .+...... .+......+.+++|.+++-.|.
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLY 195 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLY 195 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEE
Confidence 2467999999994 6789999999999999998522 22 23211110 1111123477888988775443
No 268
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.55 E-value=0.011 Score=42.70 Aligned_cols=104 Identities=6% Similarity=-0.053 Sum_probs=62.1
Q ss_pred ccEEEEEcCCCcEEEEEccCC---CCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQL---NSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
+.++++-..++.|+.+++... ......+........++++++.+..|+ +-...+.|.++++......... .....
T Consensus 42 ~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~ 120 (316)
T 1ijq_A 42 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGS 120 (316)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTC
T ss_pred CEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-ECCCC
Confidence 456667666778888887631 111222222224557888887555554 4456788999998754332222 22235
Q ss_pred ceeEEEEccCCCEEEEEeC-C-CcEEEEEcC
Q psy18074 79 HVTHTVWSLDNKFVISASD-E-MNLRVWKAH 107 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~-d-g~i~vwd~~ 107 (197)
....++++|.+..++.+.. . +.|...++.
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 6789999997766654443 2 678888775
No 269
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.53 E-value=0.0092 Score=47.73 Aligned_cols=109 Identities=14% Similarity=0.026 Sum_probs=68.2
Q ss_pred CccEEEEEcCCC-----------cEEEEEccCCC-Cceeecc-cCCCCeEEEEECCCCCEEEEEeC-CCcEEEEECCCCc
Q psy18074 2 EAFVFTAANEDF-----------NLYSYDIRQLN-SPLNVHK-DMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~d~-----------~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~~~~ 67 (197)
++++++.|+.+. .+.+||+.+.. ..+..+. .+.....++++.+++..+++|+. +..+.+||..++.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 678888886543 47889987522 1222222 22334445777889999999884 4589999988764
Q ss_pred ccceeecccccceeEEEEccCCCEEEEEe-CC-----CcEEEEEcCCCc
Q psy18074 68 SRDIYHTKRMQHVTHTVWSLDNKFVISAS-DE-----MNLRVWKAHASE 110 (197)
Q Consensus 68 ~~~~~~~~~~~~v~~v~~~~~~~~l~~~~-~d-----g~i~vwd~~~~~ 110 (197)
-...........-.+++..++++.++.|+ .+ ..+.+||..+..
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 32221111112223455667899988887 34 468999998654
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.44 E-value=0.021 Score=42.88 Aligned_cols=134 Identities=6% Similarity=-0.054 Sum_probs=74.8
Q ss_pred ccEEEEEcCCCcEEEEEccCCC---CceeecccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
+.++++-...+.|+.+++.... .....+.........+++.+.+..| ++-...+.|.+.++........+ .....
T Consensus 124 ~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~-~~~~~ 202 (400)
T 3p5b_L 124 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGS 202 (400)
T ss_dssp TEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE-ECSSC
T ss_pred CceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE-eCCCC
Confidence 4555555556667777765311 1222233234567889998855544 45556778998888755433332 22235
Q ss_pred ceeEEEEccCCCEEEEEeC--CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee
Q psy18074 79 HVTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
.+..++++|.+.+|+.... .+.|...++............. .....+++++++..|...
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l--------~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI--------QWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC--------SCEEEEEEETTTTEEEEE
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC--------CceEEEEEEeCCCEEEEE
Confidence 6889999997666665442 3678888876433222222111 113567777666555543
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.39 E-value=0.0035 Score=50.31 Aligned_cols=114 Identities=9% Similarity=0.021 Sum_probs=71.6
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCC-CCeEEEEECC--CCCEEEEEeC------CCcEEEEECCCCcccceee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSP--TGREFVAGGY------DKSLRLYLAHQGHSRDIYH 73 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~sp--~~~~l~~~~~------d~~v~i~d~~~~~~~~~~~ 73 (197)
+..++.++.|+.|+.+|..+ ++.+-.+.... .....+..+| .+..++++.. ++.|+.+|..+|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~t-G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKT-GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTT-CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCC-CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 34567778899999999987 44444433211 0001111112 2344555433 5899999999999877653
Q ss_pred ccc--c----------------------------cceeEEEEccCCCEEEEEeCCC-------------------cEEEE
Q psy18074 74 TKR--M----------------------------QHVTHTVWSLDNKFVISASDEM-------------------NLRVW 104 (197)
Q Consensus 74 ~~~--~----------------------------~~v~~v~~~~~~~~l~~~~~dg-------------------~i~vw 104 (197)
... . .....++++|+...++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 0 0112468888888888777665 39999
Q ss_pred EcCCCceeeeecc
Q psy18074 105 KAHASEKLGYVNN 117 (197)
Q Consensus 105 d~~~~~~~~~~~~ 117 (197)
|..+|+.+..+..
T Consensus 276 D~~tG~~~W~~~~ 288 (668)
T 1kv9_A 276 RPDTGKLAWHYQV 288 (668)
T ss_dssp CTTTCCEEEEEES
T ss_pred cCCCCceeeEeec
Confidence 9999999887764
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.38 E-value=0.022 Score=41.89 Aligned_cols=106 Identities=3% Similarity=-0.083 Sum_probs=66.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCC-CcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYD-KSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d-~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
+++++++-...+.|.++++.. ......+.........++++|.+..|+. -... +.|..+++..... ..+.......
T Consensus 127 ~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~ 204 (349)
T 3v64_C 127 HDKLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFW 204 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSC
T ss_pred CCeEEEEcCCCCeEEEEcCCC-CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCC
Confidence 355666666677888888763 2222223333456789999996665554 4444 7888888774332 2221222356
Q ss_pred eeEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy18074 80 VTHTVWSLDNKFVISA-SDEMNLRVWKAHAS 109 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~-~~dg~i~vwd~~~~ 109 (197)
.+.++++|++..|+.+ ...+.|..+|+...
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 7899999877766654 45678999998643
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.38 E-value=0.024 Score=42.28 Aligned_cols=105 Identities=3% Similarity=-0.076 Sum_probs=65.0
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe-CC-CcEEEEECCCCcccceeecccccce
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YD-KSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d-~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++++++-...+.|.++++.. ......+.........++++|.+..|+.+. .. +.|+.+++..... ..+........
T Consensus 171 g~lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~P 248 (386)
T 3v65_B 171 DKLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWP 248 (386)
T ss_dssp TEEEEEETTTTEEEECBTTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCE
T ss_pred CeEEEEcCCCCeEEEEeCCC-CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCe
Confidence 45566666666777777653 222222333345678999999776665543 34 6788888764332 22212223467
Q ss_pred eEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy18074 81 THTVWSLDNKFVISA-SDEMNLRVWKAHAS 109 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~-~~dg~i~vwd~~~~ 109 (197)
+.++|+|++..|+.+ ...+.|..+|+...
T Consensus 249 nGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 249 NGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred eeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 899999877766654 45678999988643
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.36 E-value=0.0068 Score=43.52 Aligned_cols=127 Identities=8% Similarity=-0.006 Sum_probs=73.9
Q ss_pred cEEEEEcCCCcEEEEEccCCCCcee---------ecccCCCCeEEEEECCCCCEEEEE-eCCCcEEEEECCC-Ccc--cc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLN---------VHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLYLAHQ-GHS--RD 70 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~---------~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~v~i~d~~~-~~~--~~ 70 (197)
.++++-..++.|+.+|.......+. ...........+ +|++..|+.+ ...+.|+.|++.. +.. ..
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~ 206 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPE 206 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCE
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccE
Confidence 3455555678888888753110111 001111234555 7788766554 4567899999875 332 11
Q ss_pred eeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceee--eeccccccccccccccceecccC---cccceee
Q psy18074 71 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG--YVNNKQRQALDYSESLKQKYAHH---PQIRRIA 143 (197)
Q Consensus 71 ~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~ 143 (197)
.+... .....++++++|+++++....+.|.++|.. ++... .+... .....+++|. |++..|.
T Consensus 207 ~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~--------~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 207 IFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG--------VIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--------CTTEEEEEECCSTTTTTEEE
T ss_pred EEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--------cCCceEEEEecccCCCCEEE
Confidence 12111 346778999999887777778889999975 54322 12111 0124788888 7765554
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.30 E-value=0.03 Score=45.83 Aligned_cols=106 Identities=6% Similarity=-0.088 Sum_probs=63.7
Q ss_pred ccEEEEEcCCCcEEEEEccCC---CCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQL---NSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
+.++++-...+.|+.+++... ......+.........|++.+.+..|+ +-...+.|.+.++..... ..+......
T Consensus 436 ~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~ 514 (791)
T 3m0c_C 436 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGS 514 (791)
T ss_dssp TEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTC
T ss_pred CeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCC
Confidence 455666666666777776531 122233332345567889988776555 445678899999875443 333233335
Q ss_pred ceeEEEEccCCCEEEEEeC--CCcEEEEEcCCC
Q psy18074 79 HVTHTVWSLDNKFVISASD--EMNLRVWKAHAS 109 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~~~ 109 (197)
....|+++|.+.+|+.... .+.|...++...
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 6889999998666665542 267888887643
No 276
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.27 E-value=0.029 Score=41.37 Aligned_cols=135 Identities=7% Similarity=0.036 Sum_probs=72.1
Q ss_pred CCCcEEEEEccCCCCceeec--cc-----CCCCeEEEEECC--CCC-EEEEEe-C--CCcEEEEECCCC--ccc--ceee
Q psy18074 11 EDFNLYSYDIRQLNSPLNVH--KD-----MTSAVTSVDYSP--TGR-EFVAGG-Y--DKSLRLYLAHQG--HSR--DIYH 73 (197)
Q Consensus 11 ~d~~i~i~d~~~~~~~~~~~--~~-----~~~~v~~~~~sp--~~~-~l~~~~-~--d~~v~i~d~~~~--~~~--~~~~ 73 (197)
.+|.|.++|+.+.......+ .+ .......+.+.+ +++ +|+.+. . +..+.+|++... ... ..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987422222222 22 123567777755 454 444443 2 456777776543 211 1121
Q ss_pred cccccceeEEEEccCCCEEEEEeC-----------------CCcEEEEEcCCCceeeeeccccccccccccccceecccC
Q psy18074 74 TKRMQHVTHTVWSLDNKFVISASD-----------------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHH 136 (197)
Q Consensus 74 ~~~~~~v~~v~~~~~~~~l~~~~~-----------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 136 (197)
...-...+.+.+.++|++.++... .|.+.-+|. ++. ..+... -...+.++|+
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~--------l~~pNGia~s 229 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEG--------FDFANGINIS 229 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEE--------ESSEEEEEEC
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEeecC--------CcccCcceEC
Confidence 122356889999999998776541 233444443 321 111111 1124789999
Q ss_pred cccceeeeec--CcceEEeecc
Q psy18074 137 PQIRRIARHR--QVPRHIYNAQ 156 (197)
Q Consensus 137 ~~~~~l~~~~--~~~~~i~~~~ 156 (197)
||++.+.... ...+..|+..
T Consensus 230 pDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 230 PDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp TTSSEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCeEEEEEEC
Confidence 9998776443 3355666654
No 277
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.21 E-value=0.036 Score=40.76 Aligned_cols=143 Identities=13% Similarity=0.151 Sum_probs=85.3
Q ss_pred EEEEcC--CCcEEEEEccCCCCceeeccc------CC-CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEECCC-------
Q psy18074 6 FTAANE--DFNLYSYDIRQLNSPLNVHKD------MT-SAVTSVDY--SPT-GR-EFVAGGYDKSLRLYLAHQ------- 65 (197)
Q Consensus 6 l~~~~~--d~~i~i~d~~~~~~~~~~~~~------~~-~~v~~~~~--sp~-~~-~l~~~~~d~~v~i~d~~~------- 65 (197)
+++... +++|.+|++.....++..+.. .. ..+..+++ +|. +. ++++...+|.+..|++..
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~ 169 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS 169 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE
T ss_pred EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc
Confidence 344444 578999987532334444421 11 45677787 775 44 567778889999998832
Q ss_pred CcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcC-----CCceeeeeccccccccccccccceeccc--Ccc
Q psy18074 66 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH-----ASEKLGYVNNKQRQALDYSESLKQKYAH--HPQ 138 (197)
Q Consensus 66 ~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~ 138 (197)
.+.++.+..+ +.+-.+...+....|+.+-.+.-|..++.. +++.+..+.... + ...+..+++ .++
T Consensus 170 ~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~---l---~aDvEGLai~~~~~ 241 (355)
T 3amr_A 170 GKKVRAFKMN--SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRH---L---TRDIEGLTIYYAAD 241 (355)
T ss_dssp EEEEEEEECS--SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSS---B---CSCEEEEEEEECGG
T ss_pred ceEEEEecCC--CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCc---c---ccCcceEEEEecCC
Confidence 2444555444 577888888888888888888666666644 233333332110 0 112466666 455
Q ss_pred cc--eeeeecC-cceEEeecc
Q psy18074 139 IR--RIARHRQ-VPRHIYNAQ 156 (197)
Q Consensus 139 ~~--~l~~~~~-~~~~i~~~~ 156 (197)
++ +++++.. +...+|+..
T Consensus 242 g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESS
T ss_pred CCEEEEEEcCCCCEEEEEECC
Confidence 44 4555533 477899875
No 278
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.20 E-value=0.063 Score=43.87 Aligned_cols=142 Identities=10% Similarity=0.001 Sum_probs=85.5
Q ss_pred EEEcCCCcEEEEEccCCCCceeeccc-------CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec-----
Q psy18074 7 TAANEDFNLYSYDIRQLNSPLNVHKD-------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT----- 74 (197)
Q Consensus 7 ~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~----- 74 (197)
..|+.++-|..|+... .. ...+.. ....|.++...++|.. ..|+.++-|..|+..++........
T Consensus 324 Wigt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 324 WLGTYFGGLNYYHPIR-NR-FKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp EEEESSSCEEEECGGG-GS-SEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred EEEECCCCeEEeCCCc-cc-ceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence 3455556688887653 22 222211 2346999999887774 4567776799999887654332211
Q ss_pred --ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEE
Q psy18074 75 --KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHI 152 (197)
Q Consensus 75 --~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i 152 (197)
-....|.+++..++|+.|..|+.++-+..||..+++... +...... .....|.++...++|.+.+... ..+.+
T Consensus 401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~---l~~~~v~~i~~d~~g~lwigt~-~Gl~~ 475 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQ---LVNENVYAILPDGEGNLWLGTL-SALVR 475 (795)
T ss_dssp -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSC---CSCSCEEEEEECSSSCEEEEES-SCEEE
T ss_pred cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCC---cCCCeeEEEEECCCCCEEEEec-CceeE
Confidence 113578999988888845566766679999988765433 2211110 1123467777777777665544 55666
Q ss_pred eecc
Q psy18074 153 YNAQ 156 (197)
Q Consensus 153 ~~~~ 156 (197)
|+..
T Consensus 476 ~~~~ 479 (795)
T 4a2l_A 476 FNPE 479 (795)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6643
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.19 E-value=0.035 Score=40.28 Aligned_cols=105 Identities=5% Similarity=-0.078 Sum_probs=66.5
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe--CCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
+++++++-...+.|.++++.. ......+.........++++|.+..|+.+. ..+.|..+++.... ...+....-..
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~ 167 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYW 167 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSC
T ss_pred CCeEEEEECCCCEEEEEECCC-CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCC
Confidence 355666666667788888763 222222223345678999999766665554 35788888876432 22221222356
Q ss_pred eeEEEEccCCCEEEEE-eCCCcEEEEEcCC
Q psy18074 80 VTHTVWSLDNKFVISA-SDEMNLRVWKAHA 108 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~-~~dg~i~vwd~~~ 108 (197)
.+.++++|++..|+.+ +..+.|..+|+..
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 7899999977776655 4567899999864
No 280
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.19 E-value=0.057 Score=44.11 Aligned_cols=144 Identities=8% Similarity=0.016 Sum_probs=86.7
Q ss_pred EEEEcCCCcEEEEEccCCCCceeecc---------cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec--
Q psy18074 6 FTAANEDFNLYSYDIRQLNSPLNVHK---------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-- 74 (197)
Q Consensus 6 l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-- 74 (197)
|..|+.++-|..||..+ +. ...+. .....|.++...+++..|..|+.++-|..||..++........
T Consensus 370 lWiGt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~ 447 (795)
T 4a2l_A 370 LWIGTNDGGLNLYNPIT-QR-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS 447 (795)
T ss_dssp EEEEESSSCEEEECTTT-CC-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS
T ss_pred EEEEECCCCeEEEcCCC-Cc-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC
Confidence 33455666688888764 22 22221 1135689999888888566677777799999987764332210
Q ss_pred -ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEe
Q psy18074 75 -KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIY 153 (197)
Q Consensus 75 -~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~ 153 (197)
.....|.++...++|++.+... + -+..||..+++........... ......|.++...++|+..+... ..+..|
T Consensus 448 ~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~ 522 (795)
T 4a2l_A 448 QLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGT--PVVSKQITTLFRDSHKRLWIGGE-EGLSVF 522 (795)
T ss_dssp CCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCC--BCCCCCEEEEEECTTCCEEEEES-SCEEEE
T ss_pred CcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEcccccccc--ccCCceEEEEEECCCCCEEEEeC-CceEEE
Confidence 1235789999888888766543 4 4888998766543221110000 01123467787888887666554 556666
Q ss_pred ecc
Q psy18074 154 NAQ 156 (197)
Q Consensus 154 ~~~ 156 (197)
+..
T Consensus 523 ~~~ 525 (795)
T 4a2l_A 523 KQE 525 (795)
T ss_dssp EEE
T ss_pred eCC
Confidence 654
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.12 E-value=0.041 Score=39.76 Aligned_cols=103 Identities=7% Similarity=-0.059 Sum_probs=65.8
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceee-cccCCCCeEEEEECCCCCEEEEEeC-C-CcEEEEECCCCcccceeecccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGY-D-KSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~-d-~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++++++-...+.|.++++.. ..... +.........++++|.+..|+.+.. . +.|..+++.. .....+....-..
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g--~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQW 165 (316)
T ss_dssp TEEEEEETTTTEEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSC
T ss_pred CeEEEEECCCCEEEEEeCCC--CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCC
Confidence 45666666677888888763 22222 2323456789999997666655443 3 6788888763 3322221222356
Q ss_pred eeEEEEccCCCEEEEE-eCCCcEEEEEcCC
Q psy18074 80 VTHTVWSLDNKFVISA-SDEMNLRVWKAHA 108 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~-~~dg~i~vwd~~~ 108 (197)
...++++|++..|+.+ ...+.|..+|+..
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 8899999987777655 4567899999874
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.02 E-value=0.006 Score=49.25 Aligned_cols=103 Identities=7% Similarity=-0.088 Sum_probs=62.1
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeec-ccCCCCeEEEEECCCCCEEEEEe-C-CCcEEEEECCCCcccceeecccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-Y-DKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~-d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++++++-...+.|.++++.. .....+ .........++++|.+..|+.+. . .+.|..+++.... ...+.......
T Consensus 465 g~LY~tD~~~~~I~v~d~dg--~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKG--VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSS--CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSS
T ss_pred CcEEEEeccCCeEEEEecCC--CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCC
Confidence 45566655667788888763 223332 22234567889999765555443 2 2678877775332 22221222245
Q ss_pred eeEEEEccCCCEEE-EEeCCCcEEEEEcCC
Q psy18074 80 VTHTVWSLDNKFVI-SASDEMNLRVWKAHA 108 (197)
Q Consensus 80 v~~v~~~~~~~~l~-~~~~dg~i~vwd~~~ 108 (197)
.+.|+|+|++..|+ +-...+.|.++++..
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 78899999866555 445567899999864
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.01 E-value=0.068 Score=40.54 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=64.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCc-eeecc-cCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECC--CCccc--ceeec
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSP-LNVHK-DMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAH--QGHSR--DIYHT 74 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~-~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~--~~~~~--~~~~~ 74 (197)
+|.++++-..++.|+.+|... +.. ...+. +.......++|+|++..|+. -...+.|+.++.. ++... ..+..
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag 317 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCG 317 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEE
T ss_pred CCeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEe
Confidence 566777766777888888864 222 11111 11223357999999995554 4556789988765 23221 11100
Q ss_pred --c------------cccceeEEEE---------ccCCCEEEEEeCCCcEEEEEcCCCc
Q psy18074 75 --K------------RMQHVTHTVW---------SLDNKFVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 75 --~------------~~~~v~~v~~---------~~~~~~l~~~~~dg~i~vwd~~~~~ 110 (197)
+ .-.....+++ .++|.+.++-...+.|+.++. +|.
T Consensus 318 ~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 318 QHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp CTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred cCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 0 1134677899 677777777667788999885 453
No 284
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.99 E-value=0.048 Score=42.92 Aligned_cols=57 Identities=11% Similarity=0.010 Sum_probs=35.9
Q ss_pred cEEEEEccCCCCceeeccc--C--------CCCeEEEEECCCCC---EEEEEeCCCcEEEEECCCCccccee
Q psy18074 14 NLYSYDIRQLNSPLNVHKD--M--------TSAVTSVDYSPTGR---EFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 14 ~i~i~d~~~~~~~~~~~~~--~--------~~~v~~~~~sp~~~---~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
.|..+|..+ ++..-.++. | ..++. +...++|+ .++.++.+|.++++|..+|+.+...
T Consensus 273 ~v~Ald~~t-G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 273 TIWGRDLDT-GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEEEETTT-CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEecCC-CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 488889887 444444321 1 12222 22224664 5677888999999999999876554
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.96 E-value=0.031 Score=42.32 Aligned_cols=73 Identities=5% Similarity=0.073 Sum_probs=51.3
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEE-EEeCCCcEEEEEcC
Q psy18074 35 SAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH 107 (197)
Q Consensus 35 ~~v~~~~~sp-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~-~~~~dg~i~vwd~~ 107 (197)
....+++++| ++..+++-..++.|+.++...+................++|+|+|++|+ +-...+.|..++..
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 3457788999 6676666667789999999876542222222224578999999999655 44567889998765
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.93 E-value=0.0044 Score=50.04 Aligned_cols=104 Identities=6% Similarity=-0.055 Sum_probs=57.5
Q ss_pred ccEEEEEcCCCcEEEEEccCC---CCceeecccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEECCCCcccceeeccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQL---NSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 78 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~v~i~d~~~~~~~~~~~~~~~~ 78 (197)
+.++++-...+.|+.+++... ......+.........+++.+.+..| ++-...+.|.++++........+ .....
T Consensus 418 ~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-~~~~~ 496 (699)
T 1n7d_A 418 NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-REQGS 496 (699)
T ss_dssp TEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEEC-CCSSC
T ss_pred CeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEE-eCCCC
Confidence 345555555677888887631 11112221112345678888655444 44455678999998755433222 22224
Q ss_pred ceeEEEEccCCCEEEEEeC--CCcEEEEEcC
Q psy18074 79 HVTHTVWSLDNKFVISASD--EMNLRVWKAH 107 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~--dg~i~vwd~~ 107 (197)
....++++|.+.+|+.... .+.|.++++.
T Consensus 497 ~P~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred CcceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 5678899997665554432 2677777664
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.88 E-value=0.14 Score=42.00 Aligned_cols=105 Identities=7% Similarity=-0.090 Sum_probs=68.1
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeec-ccCCCCeEEEEECCCCCEEEEEe-C-CCcEEEEECCCCcccceeecccccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-Y-DKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~-~-d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
++++++-...+.|.+.++.. .....+ ........+|+++|.+..|+.+. . .+.|...++..... ..+.......
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG--~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~ 559 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKG--VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQW 559 (791)
T ss_dssp TEEEEEETTTTEEEEEETTS--SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSC
T ss_pred CcEEEEecCCCeEEEEeCCC--CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCC
Confidence 46677777778888888873 333333 23345688999999766665544 2 36788888874433 3332333357
Q ss_pred eeEEEEccCCCEEEEE-eCCCcEEEEEcCCCc
Q psy18074 80 VTHTVWSLDNKFVISA-SDEMNLRVWKAHASE 110 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 110 (197)
...|++++.+..|+.+ ...+.|...++....
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 8899999877777655 445678888886433
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.84 E-value=0.064 Score=40.50 Aligned_cols=103 Identities=11% Similarity=0.128 Sum_probs=66.6
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-Cc----------eeeccc------CCCCeEEEEECCC---CCEEEEEeCCCcEEEE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SP----------LNVHKD------MTSAVTSVDYSPT---GREFVAGGYDKSLRLY 61 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~----------~~~~~~------~~~~v~~~~~sp~---~~~l~~~~~d~~v~i~ 61 (197)
+|.++|..+ +..|.+..+.... .. .+.+.- ...+|..+.|+|- +..|++-..|+.|++|
T Consensus 76 sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~y 154 (452)
T 3pbp_A 76 SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMF 154 (452)
T ss_dssp TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEE
T ss_pred CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEE
Confidence 678888875 4578888876211 00 111211 2467999999995 5689999999999999
Q ss_pred ECCCCcccc-ee--------ecccccceeEEEEccCCCEEEEEe--CCCcEEEEE
Q psy18074 62 LAHQGHSRD-IY--------HTKRMQHVTHTVWSLDNKFVISAS--DEMNLRVWK 105 (197)
Q Consensus 62 d~~~~~~~~-~~--------~~~~~~~v~~v~~~~~~~~l~~~~--~dg~i~vwd 105 (197)
|+....... .+ ...+...|.+++|.+++-.|...+ ..|.|+-..
T Consensus 155 Dl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 155 DILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp ETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 998632111 11 011225688999988776666644 667766543
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.81 E-value=0.14 Score=40.83 Aligned_cols=104 Identities=5% Similarity=-0.017 Sum_probs=60.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEE-EeCCCcEEEEECCCCcccceeeccccccee
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA-GGYDKSLRLYLAHQGHSRDIYHTKRMQHVT 81 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~ 81 (197)
+.++++-...+.|..+++.........+.........+++++.+..|+. -...+.|.+.++..... ..+....-....
T Consensus 52 ~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~ 130 (619)
T 3s94_A 52 GLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPR 130 (619)
T ss_dssp TEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCC
T ss_pred CEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCc
Confidence 4455555555667777765321112233332356889999986665554 45678899999875433 233223335678
Q ss_pred EEEEccCCCEEEEEeC--CCcEEEEEcC
Q psy18074 82 HTVWSLDNKFVISASD--EMNLRVWKAH 107 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~--dg~i~vwd~~ 107 (197)
.+++.|.+.+|+.... .+.|...++.
T Consensus 131 ~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 131 AIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp CEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 9999997666655443 3566666655
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.79 E-value=0.058 Score=39.29 Aligned_cols=96 Identities=9% Similarity=0.089 Sum_probs=65.2
Q ss_pred CCcEEEEEcc---CCCCceeecc--c-----------CCCCeEEEEECCCCCEEEEEeCC-CcEEEEECCCCcccceeec
Q psy18074 12 DFNLYSYDIR---QLNSPLNVHK--D-----------MTSAVTSVDYSPTGREFVAGGYD-KSLRLYLAHQGHSRDIYHT 74 (197)
Q Consensus 12 d~~i~i~d~~---~~~~~~~~~~--~-----------~~~~v~~~~~sp~~~~l~~~~~d-~~v~i~d~~~~~~~~~~~~ 74 (197)
+..|..||+. + ++.+.... . -......++..++|+..++++.. +.|..++............
T Consensus 99 ~~~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC
T ss_pred CCEEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec
Confidence 5678899988 5 33332221 1 12358899999999999988887 8777777664322211111
Q ss_pred ----ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy18074 75 ----KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 75 ----~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
......+.++++|+|+.|+.....|.+..+|+.+
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 1123467999999999888776699999999874
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.73 E-value=0.063 Score=39.53 Aligned_cols=92 Identities=4% Similarity=-0.058 Sum_probs=51.1
Q ss_pred CccEEEEEcCCCcEEEEEccCCCC-ceeec---ccCCCCeEEEEECCC---CCEEEEEeC----C----CcEEEEECCCC
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNS-PLNVH---KDMTSAVTSVDYSPT---GREFVAGGY----D----KSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~---~~~~~~v~~~~~sp~---~~~l~~~~~----d----~~v~i~d~~~~ 66 (197)
||.++++- .++.|+++|.. +. .+..+ .........++++|+ +..|+.+.. + ..|..|+...+
T Consensus 39 dG~l~V~e-~~g~I~~~d~~--G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 39 GGRYLVTE-RPGRLVLISPS--GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp TTEEEEEE-TTTEEEEECSS--CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred CCeEEEEe-CCCEEEEEeCC--CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 56656554 45888888743 22 22211 122356889999997 455544332 2 56777777644
Q ss_pred --c---ccce---eecccccceeEEEEccCCCEEEEEe
Q psy18074 67 --H---SRDI---YHTKRMQHVTHTVWSLDNKFVISAS 96 (197)
Q Consensus 67 --~---~~~~---~~~~~~~~v~~v~~~~~~~~l~~~~ 96 (197)
. .... +..........++|.|||.+.++.+
T Consensus 116 ~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 116 TFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp SCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred CcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 1 1111 1111111346799999998766643
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.72 E-value=0.09 Score=38.79 Aligned_cols=101 Identities=12% Similarity=0.160 Sum_probs=61.9
Q ss_pred cEEEEEcC--CCcEEEEEccCCCCc---eeecccC-CCCeEEEEECCCCCEEEEEe-----------------CCCcEEE
Q psy18074 4 FVFTAANE--DFNLYSYDIRQLNSP---LNVHKDM-TSAVTSVDYSPTGREFVAGG-----------------YDKSLRL 60 (197)
Q Consensus 4 ~~l~~~~~--d~~i~i~d~~~~~~~---~~~~~~~-~~~v~~~~~sp~~~~l~~~~-----------------~d~~v~i 60 (197)
.++++-.. +..|.+|++...+.. +..+.+. ......+.+.++|..+++.. ..|.|+-
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 35555433 467888887643322 2223221 24578999999998777643 1245555
Q ss_pred EECCCCcccceeecccccceeEEEEccCCCEEEEE-eCCCcEEEEEcCC
Q psy18074 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 108 (197)
Q Consensus 61 ~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~-~~dg~i~vwd~~~ 108 (197)
++. ++..... ..-...+.++|+||++.++.+ +..+.|..|++..
T Consensus 208 ~d~--~~~~~~~--~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 208 YSP--NDVRVVA--EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ECT--TCCEEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEC--CeEEEee--cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 554 3322222 223567999999999988755 4578899999863
No 293
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.72 E-value=0.008 Score=41.19 Aligned_cols=107 Identities=10% Similarity=0.009 Sum_probs=63.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccc--------eeEEEEccCCCEEEEEeCCCcEEEEEc
Q psy18074 35 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQH--------VTHTVWSLDNKFVISASDEMNLRVWKA 106 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~--------v~~v~~~~~~~~l~~~~~dg~i~vwd~ 106 (197)
..+..++|+|+|.+.+. .+|.++-.+..++.....+.. ... -.++.|.|+|.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s--~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR--AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH--CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc--ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 36779999998886666 678787777654332211111 122 378899999988777 4588887775
Q ss_pred CCCceeeeeccccccccccccccceecccCcccceeeeecCcc
Q psy18074 107 HASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVP 149 (197)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 149 (197)
.+.....-+ .....+-......+..+.+.|+|.+-+.. +..
T Consensus 115 P~~~~~~Wl-~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ 155 (236)
T 1tl2_A 115 PQSDTDNWI-ARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQ 155 (236)
T ss_dssp CCSTTCCHH-HHSEEEECSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred CcCCCCcee-ccccEeccCCCCceEEEEECCCceEEEEe-CCc
Confidence 432221111 11111101111235788999999988877 443
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.71 E-value=0.026 Score=45.12 Aligned_cols=112 Identities=12% Similarity=0.111 Sum_probs=66.9
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEECCCCcccce--eecccccceeEEEEccCCCEEEEEeC-CCcEEE
Q psy18074 39 SVDYSP-TGREFVAGGYDK-----------SLRLYLAHQGHSRDI--YHTKRMQHVTHTVWSLDNKFVISASD-EMNLRV 103 (197)
Q Consensus 39 ~~~~sp-~~~~l~~~~~d~-----------~v~i~d~~~~~~~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~-dg~i~v 103 (197)
.+++.| ++..++.|+.+. .+.+||..++.-... +...+.....++++.++++.++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556666 777788876542 588899988764332 22223334456778889999998874 557999
Q ss_pred EEcCCCceeeeeccccccccccccccceecccCcccceeeeecC-------cceEEeecch
Q psy18074 104 WKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQ-------VPRHIYNAQA 157 (197)
Q Consensus 104 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------~~~~i~~~~~ 157 (197)
||..+.+=.......... .-...+..+++++++.|.. ..+.+|+...
T Consensus 270 yd~~t~~W~~~~~~~~~R-------~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVAR-------GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEGGGTEEEECCCCSSCC-------SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ecCcCCceeECCCCCccc-------cccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 998865422211111110 0123445568887776552 3467777654
No 295
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.67 E-value=0.13 Score=38.61 Aligned_cols=106 Identities=6% Similarity=-0.061 Sum_probs=66.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEe--CCCcEEEEECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~ 79 (197)
.++++++-...+.|.+.++.. ......+.........++++|.+..|+... ..+.|...++......... ...-..
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g-~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~-~~~l~~ 247 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENIQW 247 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTT-CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE-CSSCSC
T ss_pred CCceEEEECCCCeEEEEeCCC-CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE-ECCCCc
Confidence 345666666667777777763 222222333345578999999766665544 2468888888743332222 222356
Q ss_pred eeEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy18074 80 VTHTVWSLDNKFVISAS-DEMNLRVWKAHAS 109 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~-~dg~i~vwd~~~~ 109 (197)
.+.+++++++..|+.+. ..+.|..+|+...
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 89999999877777554 4678999998643
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.55 E-value=0.14 Score=37.67 Aligned_cols=111 Identities=9% Similarity=0.166 Sum_probs=74.1
Q ss_pred EEEEEcCCCcEEEEEccCC------CCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC-----Ccccceee
Q psy18074 5 VFTAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-----GHSRDIYH 73 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~-----~~~~~~~~ 73 (197)
++++...+|.+..|++... .+.++.+.. .+.+..+...+....|+.+-.+..|..++... +..+....
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 5666677799999888421 244555543 56788999998888999998887788888652 33333322
Q ss_pred cccc-cceeEEEE--ccCCC-EEEEEe-CCCcEEEEEcC-CCceeeeec
Q psy18074 74 TKRM-QHVTHTVW--SLDNK-FVISAS-DEMNLRVWKAH-ASEKLGYVN 116 (197)
Q Consensus 74 ~~~~-~~v~~v~~--~~~~~-~l~~~~-~dg~i~vwd~~-~~~~~~~~~ 116 (197)
.++. ..+..+++ .++++ ||+.++ .++.+.+||.. +.+.+..+.
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 2222 36788887 55666 666555 56789999996 566666664
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.54 E-value=0.037 Score=43.83 Aligned_cols=77 Identities=10% Similarity=0.033 Sum_probs=52.7
Q ss_pred EEECCCCCEEEEEeCC----------------CcEEEEECCCCcccceeeccccc--------ceeEEEEc-cCC---CE
Q psy18074 40 VDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHTKRMQ--------HVTHTVWS-LDN---KF 91 (197)
Q Consensus 40 ~~~sp~~~~l~~~~~d----------------~~v~i~d~~~~~~~~~~~~~~~~--------~v~~v~~~-~~~---~~ 91 (197)
+++.++...++.+..+ +.|.-+|..+|+....+...+.. ...-+... .+| ..
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKL 325 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEE
Confidence 4555667777776654 37899999999988776443321 11112222 467 46
Q ss_pred EEEEeCCCcEEEEEcCCCceeeeec
Q psy18074 92 VISASDEMNLRVWKAHASEKLGYVN 116 (197)
Q Consensus 92 l~~~~~dg~i~vwd~~~~~~~~~~~ 116 (197)
++.++.+|.++++|..+|+.+....
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCcEEEEEECCCCCEeeccc
Confidence 6778899999999999999887654
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.52 E-value=0.095 Score=38.50 Aligned_cols=93 Identities=8% Similarity=0.003 Sum_probs=51.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeec---ccCCCCeEEEEECCC---CCEEEEEeC-C-----CcEEEEECCCCcc-
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPT---GREFVAGGY-D-----KSLRLYLAHQGHS- 68 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~---~~~l~~~~~-d-----~~v~i~d~~~~~~- 68 (197)
||.++++- .++.|++++ ......+..+ .........++++|+ +..|+.+.. . ..|..|+...+..
T Consensus 41 dG~l~V~e-~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~ 118 (352)
T 2ism_A 41 DGGMLIAE-RPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGV 118 (352)
T ss_dssp TSCEEEEE-TTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEE
T ss_pred CCeEEEEe-CCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcC
Confidence 57766654 458888888 3111111111 122456899999998 555554432 2 5677788764321
Q ss_pred --cce---ee--cccccceeEEEEccCCCEEEEEe
Q psy18074 69 --RDI---YH--TKRMQHVTHTVWSLDNKFVISAS 96 (197)
Q Consensus 69 --~~~---~~--~~~~~~v~~v~~~~~~~~l~~~~ 96 (197)
... +. .........++|.|+|.+.++.+
T Consensus 119 ~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 119 LDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 111 11 11111346899999997666543
No 299
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.51 E-value=0.16 Score=41.38 Aligned_cols=141 Identities=11% Similarity=0.061 Sum_probs=81.4
Q ss_pred EEEcCCCcEEEEEccCCCCceeec----ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceee-ccccccee
Q psy18074 7 TAANEDFNLYSYDIRQLNSPLNVH----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQHVT 81 (197)
Q Consensus 7 ~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~v~ 81 (197)
..|+.++-|..||..+ .. ...+ ......|.++...+++...+ |+.++-|..++..++....... ......|.
T Consensus 377 Wigt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~ 453 (781)
T 3v9f_A 377 WIGTDGGGINVFENGK-RV-AIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVR 453 (781)
T ss_dssp EEEEBSSCEEEEETTE-EE-EECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEE
T ss_pred EEEeCCCcEEEEECCC-Ce-EEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEE
Confidence 3444445588888753 11 1111 12245789998887776544 6666678899988765433221 11235788
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeec
Q psy18074 82 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNA 155 (197)
Q Consensus 82 ~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~ 155 (197)
++...++|+..+. +. +-+..+|..+++........... .....+.++...++|.+.+......+..++.
T Consensus 454 ~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~---~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 454 VFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQ---LLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp EEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSS---CSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred EEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccc---cccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 9988888876554 44 45888998766543322111000 0123467777778887666555445555554
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.50 E-value=0.091 Score=36.05 Aligned_cols=112 Identities=5% Similarity=-0.016 Sum_probs=60.3
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee------ecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy18074 37 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY------HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 37 v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~------~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~ 110 (197)
..++.|.|+|.+.++ .||.|+-++-.+...-..+ -...-..+..|.|.|+|.+.+.. ++.++-+...++.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC
Confidence 378899999998877 5698988876432211111 01111467999999999887665 7765433222211
Q ss_pred eeeeeccccccccc-cccccceecccCcccceeeeecCcceEEeecch
Q psy18074 111 KLGYVNNKQRQALD-YSESLKQKYAHHPQIRRIARHRQVPRHIYNAQA 157 (197)
Q Consensus 111 ~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~~~ 157 (197)
...-+. . ...+. .....-..+.|.+++...+.. + -.||....
T Consensus 166 ~~~wl~-~-~~~~g~~g~~~yr~l~f~~~G~l~~v~-~--g~~Y~~~~ 208 (236)
T 1tl2_A 166 QDNWLA-R-ATKIGQGGWDTFKFLFFSSVGTLFGVQ-G--GKFYEDYP 208 (236)
T ss_dssp TCCHHH-H-CEEEESSSGGGEEEEEECTTSCEEEEE-T--TEEEEESC
T ss_pred Cccccc-c-cceeccCCcceEEEEEECCCCcEEEEe-C--CeEEecCC
Confidence 111000 0 00000 001112446688999888766 2 25555443
No 301
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.42 E-value=0.088 Score=41.58 Aligned_cols=62 Identities=10% Similarity=-0.048 Sum_probs=43.2
Q ss_pred CcEEEEECCCCcccceeeccccc--------ceeEEEEc-cCCC---EEEEEeCCCcEEEEEcCCCceeeeecc
Q psy18074 56 KSLRLYLAHQGHSRDIYHTKRMQ--------HVTHTVWS-LDNK---FVISASDEMNLRVWKAHASEKLGYVNN 117 (197)
Q Consensus 56 ~~v~i~d~~~~~~~~~~~~~~~~--------~v~~v~~~-~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~ 117 (197)
+.|.-+|..+|+.+..+...+.. ...-+... .+|+ .++.++.+|.++++|..+|+.+.....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 57999999999988776443211 11112222 4674 677899999999999999998876543
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.41 E-value=0.27 Score=39.27 Aligned_cols=106 Identities=7% Similarity=-0.034 Sum_probs=64.4
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++-..++.|+.+++.. ......+.........+++.+.+..|+ +-...+.|.+.++..... ..+....-...
T Consensus 48 ~~~lywtD~~~~~I~r~~~~g-~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P 125 (628)
T 4a0p_A 48 DNRIYWTDISLKTISRAFMNG-SALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSP 125 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCE
T ss_pred CCEEEEEECCCCeEEEEECCC-CCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCc
Confidence 355666666677788787763 222223322224567888887666555 445567899999875432 22222333567
Q ss_pred eEEEEccCCCEEEEEe--CCCcEEEEEcCCC
Q psy18074 81 THTVWSLDNKFVISAS--DEMNLRVWKAHAS 109 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~--~dg~i~vwd~~~~ 109 (197)
..++++|...+|+... ..+.|...++...
T Consensus 126 ~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 126 RALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 8999999655666544 2466777776543
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.011 Score=43.22 Aligned_cols=115 Identities=12% Similarity=0.045 Sum_probs=69.0
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecccC-CCCeEEEEE--CCCCCEEEEE--eCCCcEEEEECCCCcccceeecccc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKDM-TSAVTSVDY--SPTGREFVAG--GYDKSLRLYLAHQGHSRDIYHTKRM 77 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~--sp~~~~l~~~--~~d~~v~i~d~~~~~~~~~~~~~~~ 77 (197)
+.++++++.||.|+-+|..+ ++..-.+... ..++....- .+.+..++.+ +.||.|+.++..+|.....+.....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t-G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN-GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT-TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCC-CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 34678888999999999887 4544444332 122222110 1112234433 5899999999988854433322110
Q ss_pred cceeEEEEc-----------cCCCEEEEEeCCCcEEEEEcCCCceeeeeccc
Q psy18074 78 QHVTHTVWS-----------LDNKFVISASDEMNLRVWKAHASEKLGYVNNK 118 (197)
Q Consensus 78 ~~v~~v~~~-----------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 118 (197)
....-+... ..+..+++|+.+|.+...|+.+|+.+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 000001111 13557789999999999999999999887654
No 304
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.22 E-value=0.26 Score=37.60 Aligned_cols=96 Identities=8% Similarity=0.110 Sum_probs=52.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-Cceeeccc------CCCCeEEEEECCC---CCEEEEEeC-------------CCcE
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVHKD------MTSAVTSVDYSPT---GREFVAGGY-------------DKSL 58 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~------~~~~v~~~~~sp~---~~~l~~~~~-------------d~~v 58 (197)
||.++++-...+.|++++..... ..+..+.. .++.+..|+|+|+ +..|+.+.. ...|
T Consensus 37 dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v 116 (454)
T 1cru_A 37 DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTII 116 (454)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEE
Confidence 67777776555578888764311 11222221 2456789999995 555544332 2345
Q ss_pred EEEECCCC--cc--cc-ee---ecccccceeEEEEccCCCEEEEEeC
Q psy18074 59 RLYLAHQG--HS--RD-IY---HTKRMQHVTHTVWSLDNKFVISASD 97 (197)
Q Consensus 59 ~i~d~~~~--~~--~~-~~---~~~~~~~v~~v~~~~~~~~l~~~~~ 97 (197)
.-|+...+ .. .. .+ .....-....++|.|||.+.++.++
T Consensus 117 ~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 117 RRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred EEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 55655432 11 11 11 1111124688999999987776543
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.11 E-value=0.26 Score=36.19 Aligned_cols=107 Identities=7% Similarity=0.033 Sum_probs=59.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee----ecccccceeEEEEccC---CCEEEEE-eCC-----Cc
Q psy18074 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY----HTKRMQHVTHTVWSLD---NKFVISA-SDE-----MN 100 (197)
Q Consensus 34 ~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~----~~~~~~~v~~v~~~~~---~~~l~~~-~~d-----g~ 100 (197)
-.....++|.|+|..++ +..++.|++++ ++...... ..........++|+|+ +..|+.+ ... +.
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 45678999999998554 45669999998 44321111 0112356889999998 5555433 322 56
Q ss_pred EEEEEcCCCce---eeeeccccccccccccccceecccCcccceeeee
Q psy18074 101 LRVWKAHASEK---LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 101 i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
|..++...+.. ...+...... .........++|.|||.+.++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~--~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPAR--PHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCC--TTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCC--CCCCcCCceEEECCCCCEEEEE
Confidence 77888764311 0111100000 0001113578999999765543
No 306
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.02 E-value=0.49 Score=38.57 Aligned_cols=141 Identities=9% Similarity=0.011 Sum_probs=80.2
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecc---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc----
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHK---DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---- 75 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---- 75 (197)
+.+.+ |+.++-|..||..+ +. ...+. .....|.++...+++...+ |+. +-|..|+..++.........
T Consensus 418 g~lWi-gt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 418 GNLWF-GTYLGNISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp SCEEE-EETTEEEEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSC
T ss_pred CCEEE-EeccCCEEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCccccc
Confidence 44443 55545577787754 22 22222 1345789998888776444 455 45889998876543322111
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcce-EEee
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPR-HIYN 154 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~i~~ 154 (197)
....|.++...++|++.+.....| +..||..+++.. .+..... + ....|.++...++|.+.++.. ..+ ..|+
T Consensus 493 ~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~-~~~~~~~--l--~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 493 LENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVR-KFNQYEG--F--CSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp SCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEE-EECTTTT--C--SCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred ccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEE-EccCCCC--C--CCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 135789999999888766543344 777887665432 2322111 1 123366777777777665544 333 5555
Q ss_pred c
Q psy18074 155 A 155 (197)
Q Consensus 155 ~ 155 (197)
.
T Consensus 566 ~ 566 (781)
T 3v9f_A 566 A 566 (781)
T ss_dssp T
T ss_pred C
Confidence 4
No 307
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.00 E-value=0.27 Score=35.56 Aligned_cols=111 Identities=6% Similarity=0.001 Sum_probs=61.6
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc---cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy18074 33 MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 109 (197)
Q Consensus 33 ~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~ 109 (197)
....+..+.+++++..+ .++.+|.+++.+...+........+ ....+..+++.+++..++.+. ++.+ .+....|
T Consensus 203 ~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp SSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT
T ss_pred CCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC
Confidence 34578889999988755 4456787776643323322211111 223578899998887766655 6655 3444444
Q ss_pred ceeeeeccccccccccccccceecccCcccceeeeecCcceE
Q psy18074 110 EKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRH 151 (197)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 151 (197)
+.-..+..... ....+..+.|.+++..++.+.++.+.
T Consensus 280 ~tW~~~~~~~~-----~~~~~~~v~~~~~~~~~~~G~~G~i~ 316 (327)
T 2xbg_A 280 QTWQQDVDVKK-----VPSNFYKILFFSPDQGFILGQKGILL 316 (327)
T ss_dssp SSCEECGGGTT-----SSSCCCEEEEEETTEEEEECSTTEEE
T ss_pred cccEEcCccCC-----CCCCeEEEEEECCCceEEEcCCceEE
Confidence 33222221100 00124667777777777777766443
No 308
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.76 E-value=0.36 Score=34.96 Aligned_cols=113 Identities=8% Similarity=0.007 Sum_probs=61.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCce
Q psy18074 32 DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 111 (197)
Q Consensus 32 ~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 111 (197)
.....+..+.+.|++..++.+. .+.++.-.-..+.............+..+.+.++++.++. +.+|.+++.+...++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSEN 237 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEE
T ss_pred CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCe
Confidence 3456788999999888776654 4555443211122222222233457888999998876654 4577777664322332
Q ss_pred eeeeccccccccccccccceecccCcccceeeeecCcce
Q psy18074 112 LGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPR 150 (197)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 150 (197)
-..+.... + .....+..+.+.+++..++.+....+
T Consensus 238 W~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 238 WGELLSPL---R-RNSVGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp ECCCBCTT---S-SCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred eEeccCCc---c-cCCcceEEEEecCCCEEEEEeCCCeE
Confidence 22121110 0 00012467778888887777665433
No 309
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.76 E-value=0.39 Score=35.32 Aligned_cols=95 Identities=8% Similarity=0.121 Sum_probs=53.2
Q ss_pred CccEEEEEcCCCcEEEEEccCCC-Cceeec----ccCCCCeEEEEECCC---CCEEEEE---eCCCcEEEEECCCC----
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLN-SPLNVH----KDMTSAVTSVDYSPT---GREFVAG---GYDKSLRLYLAHQG---- 66 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~----~~~~~~v~~~~~sp~---~~~l~~~---~~d~~v~i~d~~~~---- 66 (197)
||.++++-...|.|++++..... ..+..+ ....+....++++|+ +..|+.. ..+..|.-|.+..+
T Consensus 42 dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~ 121 (347)
T 3das_A 42 GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSG 121 (347)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTT
T ss_pred CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCccc
Confidence 67777777668899988765321 112111 223567899999995 3444432 23445666666542
Q ss_pred -c---cccee---ecccccceeEEEEccCCCEEEEEe
Q psy18074 67 -H---SRDIY---HTKRMQHVTHTVWSLDNKFVISAS 96 (197)
Q Consensus 67 -~---~~~~~---~~~~~~~v~~v~~~~~~~~l~~~~ 96 (197)
. ....+ .....-....+.|.|||.+.++.+
T Consensus 122 ~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 122 EQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp CCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred ccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 1 11111 111111345799999998777654
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.73 E-value=0.18 Score=37.12 Aligned_cols=105 Identities=9% Similarity=-0.059 Sum_probs=58.7
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee----ecccccceeEEEEccC---CCEEEEEeC----C----
Q psy18074 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY----HTKRMQHVTHTVWSLD---NKFVISASD----E---- 98 (197)
Q Consensus 34 ~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~----~~~~~~~v~~v~~~~~---~~~l~~~~~----d---- 98 (197)
......++|.|+|..+ ++..++.|++++ .++. .... ..........++++|+ +..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~l~-V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYL-VTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEEE-EEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeEE-EEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 4567899999999744 455669999887 3454 1111 0112246889999997 445543322 2
Q ss_pred CcEEEEEcCCCc--e--eee-eccccccccccccccceecccCcccceeeee
Q psy18074 99 MNLRVWKAHASE--K--LGY-VNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 99 g~i~vwd~~~~~--~--~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
+.|..|+..... . ... +..... ........++|.|||.+.++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~----~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPG----AYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEEC----CSSCCCCCEEECTTSCEEEEC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCC----CCCcCCceEEECCCCcEEEEE
Confidence 567777765431 0 011 110000 001113578899999766653
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.53 E-value=0.42 Score=36.49 Aligned_cols=61 Identities=7% Similarity=0.169 Sum_probs=39.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeec-------ccccceeEEEEccC---CCEEEE
Q psy18074 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-------KRMQHVTHTVWSLD---NKFVIS 94 (197)
Q Consensus 34 ~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~-------~~~~~v~~v~~~~~---~~~l~~ 94 (197)
....+.++|.|+|+.+++-...+.|++++..++........ ........++|+|+ +.+|+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 45678999999999777654445788887655543221110 11356779999996 555543
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.48 E-value=0.5 Score=34.74 Aligned_cols=79 Identities=10% Similarity=0.042 Sum_probs=49.4
Q ss_pred cccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee-----ecccccceeEEEEccC---CCEEEEE---eCC
Q psy18074 30 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY-----HTKRMQHVTHTVWSLD---NKFVISA---SDE 98 (197)
Q Consensus 30 ~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~-----~~~~~~~v~~v~~~~~---~~~l~~~---~~d 98 (197)
+-..-...+.++|.|+|..+++--..|.|++++...+...... ..........++++|+ +.+|+.. ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3333566789999999997776655899999987655432111 1122356789999995 3444432 234
Q ss_pred CcEEEEEcCC
Q psy18074 99 MNLRVWKAHA 108 (197)
Q Consensus 99 g~i~vwd~~~ 108 (197)
+.|.-|.+..
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 5566665543
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.48 E-value=0.64 Score=35.95 Aligned_cols=157 Identities=8% Similarity=-0.062 Sum_probs=83.1
Q ss_pred CccEEEEEcCCCcEEEEEcc-------CCCC-----c-----eee-cc-cCCCCeEEEEECCCCCEEEEE-eCCCcEEEE
Q psy18074 2 EAFVFTAANEDFNLYSYDIR-------QLNS-----P-----LNV-HK-DMTSAVTSVDYSPTGREFVAG-GYDKSLRLY 61 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~-------~~~~-----~-----~~~-~~-~~~~~v~~~~~sp~~~~l~~~-~~d~~v~i~ 61 (197)
++.++++-..++.|+.+|+. +... + ... +. ........++|+|+|..|+.+ +....|+.+
T Consensus 258 ~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 258 NGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp TCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 46778888788889999986 3211 0 111 11 112446799999999965544 566788885
Q ss_pred EC--CCCccc--ceeec-----c---------ccccee-EEEEc-------cCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy18074 62 LA--HQGHSR--DIYHT-----K---------RMQHVT-HTVWS-------LDNKFVISASDEMNLRVWKAHASEKLGYV 115 (197)
Q Consensus 62 d~--~~~~~~--~~~~~-----~---------~~~~v~-~v~~~-------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 115 (197)
+. ..+... ..+.. + .-.... .++.. ++|.++++=.....|+.++. +|. +.++
T Consensus 338 d~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~Ti 415 (496)
T 3kya_A 338 DYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTY 415 (496)
T ss_dssp EEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEE
T ss_pred ecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEE
Confidence 54 333210 11100 0 012244 44454 45666666666778998884 453 4444
Q ss_pred cccccc----------------ccccccccceecccCcc-cceeeeecCc-ceEEeecchhhH
Q psy18074 116 NNKQRQ----------------ALDYSESLKQKYAHHPQ-IRRIARHRQV-PRHIYNAQAEHR 160 (197)
Q Consensus 116 ~~~~~~----------------~~~~~~~~v~~~~~s~~-~~~l~~~~~~-~~~i~~~~~~~~ 160 (197)
.+.... .....-.....+++.++ |.+.++-... .+..+++.....
T Consensus 416 aG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 416 AGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp EESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred ecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 332110 00001123567888886 6655554433 455555544433
No 314
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.40 E-value=0.8 Score=36.56 Aligned_cols=103 Identities=6% Similarity=-0.002 Sum_probs=58.6
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeeccc------CCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeecc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHKD------MTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTK 75 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~ 75 (197)
+.++.+=...+.|+.+++.. ......+.. ....+.++++.+.+..|+ +-+..+.|.+.++. |.....+...
T Consensus 352 ~~iy~sD~~~~~I~r~~~~g-~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~ 429 (628)
T 4a0p_A 352 KQLYWIDSRQNMIRKAQEDG-SQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKG 429 (628)
T ss_dssp TEEEEEETTTTEEEEEETTS-CSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEEC
T ss_pred CeEEEEecCcceEEEEEcCC-CCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeC
Confidence 44555545556666666653 122222222 234678999988776555 55567788888886 4444344333
Q ss_pred cccceeEEEEccCCCEEE-EEeCCC--cEEEEEcC
Q psy18074 76 RMQHVTHTVWSLDNKFVI-SASDEM--NLRVWKAH 107 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~-~~~~dg--~i~vwd~~ 107 (197)
....+..++++|...+++ +-.... .|...++.
T Consensus 430 ~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d 464 (628)
T 4a0p_A 430 EQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD 464 (628)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT
T ss_pred CCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC
Confidence 346789999999544444 432222 45555554
No 315
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.38 E-value=0.8 Score=36.48 Aligned_cols=104 Identities=8% Similarity=0.003 Sum_probs=60.7
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEE-EEeCCCcEEEEECCCCcccceeecccccce
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AGGYDKSLRLYLAHQGHSRDIYHTKRMQHV 80 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v 80 (197)
++.++++-...+.|+.+++.. ......+........++++.+.+..|+ +-+..+.|.+.++.... ...+....-...
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g-~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P 437 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDG-SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEP 437 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSE
T ss_pred CCeEEEEeCCCCeEEEEEcCC-CccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCe
Confidence 345566655566777777763 222222322234567888887555454 54567789998887543 233322333578
Q ss_pred eEEEEccCCCEEEEEeC--CCcEEEEEcC
Q psy18074 81 THTVWSLDNKFVISASD--EMNLRVWKAH 107 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~--dg~i~vwd~~ 107 (197)
..+++.|...+|+.... .+.|...++.
T Consensus 438 ~~iavdp~~G~ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 438 RAIVLDPMVGYMYWTDWGEIPKIERAALD 466 (619)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eeEEEEcCCCcEEEecCCCCCEEEEEccC
Confidence 99999997445554432 3556666654
No 316
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.93 E-value=0.48 Score=37.25 Aligned_cols=93 Identities=13% Similarity=0.092 Sum_probs=59.8
Q ss_pred EEEEEccC----CCCceeecccCCCCeEEEEECCCCCEEEEEe-CCCcEEEEECCCC------cc---ccee--eccccc
Q psy18074 15 LYSYDIRQ----LNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQG------HS---RDIY--HTKRMQ 78 (197)
Q Consensus 15 i~i~d~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~v~i~d~~~~------~~---~~~~--~~~~~~ 78 (197)
|.+.|.+. .......+.. ......+..+|||.+++.++ .+.++.+++.+.- .. .... ...-..
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~-pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPV-PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEE-SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEeC-CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 66777664 2223333333 34556789999999987655 6779999998741 11 0111 111225
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
.....+|.++|.-..+.-.|..|..|++..
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccH
Confidence 678899999994444666899999999864
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.87 E-value=0.63 Score=34.15 Aligned_cols=95 Identities=8% Similarity=0.039 Sum_probs=49.0
Q ss_pred Ccc-EEEEEcCCCcEEEEEccCCC-Cceeec----ccCCCCeEEEEECCC---CCEEEEE-eC-------CCcEEEEECC
Q psy18074 2 EAF-VFTAANEDFNLYSYDIRQLN-SPLNVH----KDMTSAVTSVDYSPT---GREFVAG-GY-------DKSLRLYLAH 64 (197)
Q Consensus 2 ~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~----~~~~~~v~~~~~sp~---~~~l~~~-~~-------d~~v~i~d~~ 64 (197)
||. ++++- ..|.|++++..... ..+..+ ....+....++++|+ +..|+.+ +. ...|..|++.
T Consensus 28 dG~~l~V~e-~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 28 DNHGMLITL-RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLS 106 (353)
T ss_dssp TTCCEEEEE-TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEEC
T ss_pred CCCEEEEEe-CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEEC
Confidence 566 66554 56889988854210 111111 122456789999996 4545443 22 2356666665
Q ss_pred CC--cc--cceeec------ccccceeEEEEccCCCEEEEEeC
Q psy18074 65 QG--HS--RDIYHT------KRMQHVTHTVWSLDNKFVISASD 97 (197)
Q Consensus 65 ~~--~~--~~~~~~------~~~~~v~~v~~~~~~~~l~~~~~ 97 (197)
.+ .. ...+.. ........++|.|||.+.++.+.
T Consensus 107 ~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 107 DDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp TTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 33 11 111100 00012357999999966555443
No 318
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.79 E-value=0.029 Score=41.13 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=41.9
Q ss_pred cEEEEE-cCCCcEEEEEccCCCCceeeccc----CCCCeEE---EEE-C----CCCCEEEEEeCCCcEEEEECCCCcccc
Q psy18074 4 FVFTAA-NEDFNLYSYDIRQLNSPLNVHKD----MTSAVTS---VDY-S----PTGREFVAGGYDKSLRLYLAHQGHSRD 70 (197)
Q Consensus 4 ~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~----~~~~v~~---~~~-s----p~~~~l~~~~~d~~v~i~d~~~~~~~~ 70 (197)
..++.. ..||.|+.++..+ +.....+.. ...++.. ... . ..+..+++|+.+|.++-.|+.+|+.+.
T Consensus 57 ~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 57 ETLIIEPFGDGNIYYFNAHQ-GLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp EEEEECCSTTTEEEEEETTT-EEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCEEEEEECCC-CcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 444444 5789999998765 322111110 1122221 000 0 135678899999999999999999888
Q ss_pred eeec
Q psy18074 71 IYHT 74 (197)
Q Consensus 71 ~~~~ 74 (197)
.+..
T Consensus 136 ~~~~ 139 (339)
T 2be1_A 136 AFGP 139 (339)
T ss_dssp EEST
T ss_pred EEec
Confidence 7743
No 319
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.68 E-value=0.62 Score=34.19 Aligned_cols=108 Identities=6% Similarity=-0.003 Sum_probs=57.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee------ecccccceeEEEEccC---CCEEEEE-eC-------
Q psy18074 35 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY------HTKRMQHVTHTVWSLD---NKFVISA-SD------- 97 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~------~~~~~~~v~~v~~~~~---~~~l~~~-~~------- 97 (197)
.....++|.|+|+.++.+...|.|++++.. +.....+ ..........++|+|+ +.+|+.+ +.
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 456899999999834455567999999853 3221111 0112245789999996 4554433 22
Q ss_pred CCcEEEEEcCCCc----eeee-eccccccccccccccceecccCcccceeeee
Q psy18074 98 EMNLRVWKAHASE----KLGY-VNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 98 dg~i~vwd~~~~~----~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
...|..|++.... .... +...... .........+.|.|||.+.++.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~--~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKL--STGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCC--BSSSCCCCCEEECSSSEEEEEE
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCC--CCCcccCccEEECCCCcEEEEE
Confidence 2346666664321 1111 1110000 0001113578999999766553
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.95 E-value=0.74 Score=32.57 Aligned_cols=102 Identities=13% Similarity=0.213 Sum_probs=53.1
Q ss_pred CccEEEEEcCC-------CcEEEEEccCCCCceeec---ccCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCC
Q psy18074 2 EAFVFTAANED-------FNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~ 66 (197)
++.+++.|+.+ ..+.+||+.+ . ....+ .........+.+ ++..++.|+.+ ..+.+||+.++
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATT-N-EWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCC-C-cEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 45677776543 3578899874 2 22222 111122233333 56667777654 36889999876
Q ss_pred ccccee--ecccccceeEEEEccCCCEEEEEeCCC-----cEEEEEcCCCc
Q psy18074 67 HSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEM-----NLRVWKAHASE 110 (197)
Q Consensus 67 ~~~~~~--~~~~~~~v~~v~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 110 (197)
.-.... .... .....+. .+++.++.|+.++ .+.+||+.+.+
T Consensus 231 ~W~~~~~~~~~r-~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 231 AWRQVADMNMCR-RNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCCSSCC-BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CEeeCCCCCCcc-ccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 432221 1111 1112222 2566777776543 47888876543
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.60 E-value=0.68 Score=32.75 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=53.2
Q ss_pred CccEEEEEcCC-----CcEEEEEccCCCCceeeccc---CCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcc
Q psy18074 2 EAFVFTAANED-----FNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHS 68 (197)
Q Consensus 2 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~ 68 (197)
++.+++.|+.+ ..+.+||+.+ . ....+.. .......+.+ ++..++.|+.+ ..+.+||+.+..-
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHT-G-HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCC-C-cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 46677777654 4588899874 2 2222211 1112233333 56666777654 4689999987653
Q ss_pred cceeeccc-ccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCC
Q psy18074 69 RDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS 109 (197)
Q Consensus 69 ~~~~~~~~-~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 109 (197)
........ ......+. -+++.++.|+.+ ..+.+||+.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 22211111 11112222 256666777654 34677777654
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.41 E-value=1.4 Score=31.08 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=53.2
Q ss_pred CccEEEEEcCCC-----cEEEEEccCCCCceeeccc---CCCCeEEEEECCCCCEEEEEeCC-------CcEEEEECCCC
Q psy18074 2 EAFVFTAANEDF-----NLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYD-------KSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d-------~~v~i~d~~~~ 66 (197)
++.+++.|+.++ .+.+||+.+ . ....+.. .......+.+ ++..++.|+.+ ..+..||+.++
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKS-N-EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCC-C-eEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 466777776553 467788764 2 2222211 1122223333 55666666542 35888998876
Q ss_pred cccce--eecccccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy18074 67 HSRDI--YHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 110 (197)
Q Consensus 67 ~~~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 110 (197)
.-... +.... .....+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 184 ~W~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 184 EWTYIAEMSTRR-SGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEEECCCSSCC-BSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred cEEECCCCcccc-ccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 43222 11111 11222222 56677777654 368889987654
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.15 E-value=1.6 Score=30.90 Aligned_cols=102 Identities=9% Similarity=0.157 Sum_probs=54.3
Q ss_pred CccEEEEEcCC----CcEEEEEccCCCCceeec---ccCCCCeEEEEECCCCCEEEEEeCC------CcEEEEECCCCcc
Q psy18074 2 EAFVFTAANED----FNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTGREFVAGGYD------KSLRLYLAHQGHS 68 (197)
Q Consensus 2 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d------~~v~i~d~~~~~~ 68 (197)
++.+++.|+.+ ..+.+||+.+ . ....+ .........+.+ ++..++.|+.+ ..+.+||..+..-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVK-D-SWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTT-T-EEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCC-C-eEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 46677777654 5678888875 2 22222 111122233333 56666777654 4688999887643
Q ss_pred cce--eecccccceeEEEEccCCCEEEEEeC---------CCcEEEEEcCCCc
Q psy18074 69 RDI--YHTKRMQHVTHTVWSLDNKFVISASD---------EMNLRVWKAHASE 110 (197)
Q Consensus 69 ~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~---------dg~i~vwd~~~~~ 110 (197)
... +.... .....+. -+++.++.|+. -..+.+||+.+..
T Consensus 131 ~~~~~~p~~r-~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 131 HTKPSMLTQR-CSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EEECCCSSCC-BSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EeCCCCcCCc-ceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 222 11111 1112222 25666666653 3458889987654
No 324
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.15 E-value=1.7 Score=31.18 Aligned_cols=109 Identities=12% Similarity=-0.008 Sum_probs=58.8
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEECCCCcccceeecccccceeEEEEccCCCE
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF 91 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 91 (197)
..|+..++. +.....+..+.. ..++|++..|+..+. ...|+..++..+.....+ .+ ... ..++|++.+
T Consensus 129 ~~Iy~~~~d--Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~-~~---~~~-~~~~P~g~~ 197 (302)
T 3s25_A 129 TSLYRIRID--GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY-DC---NCY-KPVVLDDTN 197 (302)
T ss_dssp EEEEEEETT--SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE-CS---CEE-EEEEEETTE
T ss_pred ceEEEEECC--CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe-CC---Ccc-ceeeecCCE
Confidence 344444444 333344444332 356778888876654 678888888766543332 22 222 235699999
Q ss_pred EEEEeCC--CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee
Q psy18074 92 VISASDE--MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 92 l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
|+-.... ..|..-++.... ...+.... ...|+|++.+|...
T Consensus 198 iy~t~~~~~~~I~~~~ldG~~-~~~Lt~~~------------~~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 198 VYYMDVNRDNAIVHVNINNPN-PVVLTEAN------------IEHYNVYGSLIFYQ 240 (302)
T ss_dssp EEEEEGGGTTEEEEECSSSCC-CEECSCSC------------EEEEEEETTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCC-eEEEeCCC------------cceEEECCCEEEEE
Confidence 8855433 356666665433 22232111 12367777777654
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.72 E-value=1.9 Score=30.63 Aligned_cols=102 Identities=13% Similarity=0.208 Sum_probs=54.0
Q ss_pred CccEEEEEcCC-----CcEEEEEccCCCCceeec---ccCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcc
Q psy18074 2 EAFVFTAANED-----FNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHS 68 (197)
Q Consensus 2 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~ 68 (197)
++.+++.|+.+ ..+.+||+.+ . ....+ .........+.+ ++..++.|+.+ ..+..||+.+..-
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPER-D-EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTT-T-EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCC-C-eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 46677777643 3578888874 2 22222 111122233333 56666777654 4688899887543
Q ss_pred cce--eecccccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy18074 69 RDI--YHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 110 (197)
Q Consensus 69 ~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 110 (197)
... +.... .....+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 197 ~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 197 RMITAMNTIR-SGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EECCCCSSCC-BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eeCCCCCCcc-ccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 221 11111 12222223 56666777654 458899987654
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.39 E-value=2 Score=30.21 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=54.6
Q ss_pred CccEEEEEcCC-----CcEEEEEccCCC-Cceeecc---cCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCc
Q psy18074 2 EAFVFTAANED-----FNLYSYDIRQLN-SPLNVHK---DMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~d-----~~i~i~d~~~~~-~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~ 67 (197)
++.+++.|+.+ ..+.+||+.+.. .....+. ........+.+ ++..++.|+.+ ..+.+||..++.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45677777754 458889987522 0022221 11122223333 56666676643 368889988765
Q ss_pred ccceeeccc-ccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy18074 68 SRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 110 (197)
Q Consensus 68 ~~~~~~~~~-~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 110 (197)
-........ ......+. .+++.++.|+.+ ..+.+||+.+..
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 322211111 11112222 256666776654 458888987654
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.29 E-value=2.2 Score=30.31 Aligned_cols=101 Identities=14% Similarity=0.211 Sum_probs=52.6
Q ss_pred CccEEEEEcCC-----CcEEEEEccCCCCceeeccc---CCCCeEEEEECCCCCEEEEEeCC-----CcEEEEECCCCcc
Q psy18074 2 EAFVFTAANED-----FNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHS 68 (197)
Q Consensus 2 ~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d-----~~v~i~d~~~~~~ 68 (197)
++.+++.|+.+ ..+.+||+.+ . ....+.. .......+.+ ++..++.|+.+ ..+.+||+.+..-
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPER-N-EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-T-EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCC-C-eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 45677777654 4588899874 2 2222211 1122233333 56666777654 5689999987643
Q ss_pred cce--eecccccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCC
Q psy18074 69 RDI--YHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS 109 (197)
Q Consensus 69 ~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 109 (197)
... +.... .....+. -+++.++.|+.+ ..+.+||+.+.
T Consensus 244 ~~~~~~p~~r-~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 244 TFVAPMKHRR-SALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EECCCCSSCC-BSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCCCCCCc-cceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 222 11111 1112222 256666677643 34677777654
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.25 E-value=2.1 Score=36.83 Aligned_cols=103 Identities=13% Similarity=0.166 Sum_probs=62.3
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEE--ECCCCcccceeecccccc
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY--LAHQGHSRDIYHTKRMQH 79 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~--d~~~~~~~~~~~~~~~~~ 79 (197)
+|+++++. ..+|++|++.. .+.++.-..+-..+..+.....+.+++.|..-..+.++ +...+.+...........
T Consensus 895 ~g~Lla~i--g~~l~vy~l~~-~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~ 971 (1158)
T 3ei3_A 895 NGKLLASI--NSTVRLYEWTT-EKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNW 971 (1158)
T ss_dssp TTEEEEEE--TTEEEEEEECT-TSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBC
T ss_pred CCEEEEEc--CCEEEEEECCC-CceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeeccccc
Confidence 46555544 36899999975 23333111111122222332357889988877777664 444555444443444577
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
++++.|-.++ .++.+..+|++.+.....
T Consensus 972 vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 972 MSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 8888886554 677789999999987654
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.94 E-value=2.4 Score=30.12 Aligned_cols=102 Identities=14% Similarity=0.218 Sum_probs=53.1
Q ss_pred CccEEEEEcCC--------CcEEEEEccCCCCceeeccc---CCCCeEEEEECCCCCEEEEEeC-C-----CcEEEEECC
Q psy18074 2 EAFVFTAANED--------FNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGY-D-----KSLRLYLAH 64 (197)
Q Consensus 2 ~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~-d-----~~v~i~d~~ 64 (197)
++.+++.|+.+ ..+.+||+.+. ....+.. .......+.+ ++..++.|+. + ..+.+||..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCC
Confidence 45667777632 45888888752 2222211 1122222332 5566677765 2 478899988
Q ss_pred CCcccce--eecccccceeEEEEccCCCEEEEEeCCC-----cEEEEEcCCCc
Q psy18074 65 QGHSRDI--YHTKRMQHVTHTVWSLDNKFVISASDEM-----NLRVWKAHASE 110 (197)
Q Consensus 65 ~~~~~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 110 (197)
+..-... +.... .....+.+ +++.++.|+.++ .+.+||+.+.+
T Consensus 174 ~~~W~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 174 KFEWKELAPMQTAR-SLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEECCCCSSCC-BSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCeEEECCCCCCch-hceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 7642221 11111 11222222 566777776543 47888887653
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.93 E-value=1.5 Score=31.28 Aligned_cols=62 Identities=18% Similarity=0.228 Sum_probs=35.4
Q ss_pred CccEEEEEcC------CCcEEEEEccCCCCceeeccc---CCCCeEEEEECCCCCEEEEEeCCC-----cEEEEECCCCc
Q psy18074 2 EAFVFTAANE------DFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQGH 67 (197)
Q Consensus 2 ~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~-----~v~i~d~~~~~ 67 (197)
++.+++.|+. -..+.+||+.+. ....+.. .......+.+ ++..++.|+.++ .+.+||+.+..
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 4667777765 245888998752 2222221 1112233333 566777777554 58889988764
No 331
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.53 E-value=3.1 Score=30.53 Aligned_cols=119 Identities=12% Similarity=0.175 Sum_probs=74.3
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCE
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF 91 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 91 (197)
+..|.+.|+.+...+.+.-... -+.-.+|....++.-. ...+.+||+.+...+...... ..|..-.|-.+. .
T Consensus 48 ~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~--e~VvfWkWis~~-~ 119 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT--DDVTFWKWISLN-T 119 (365)
T ss_dssp EEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS--SCEEEEEECSSS-E
T ss_pred CCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC--CccEEEEecCCC-e
Confidence 3468888988654544332222 2445689888777655 678999999998776665332 578888885543 4
Q ss_pred EEEEeCCCcEEEEEcCC-CceeeeeccccccccccccccceecccCcccceee
Q psy18074 92 VISASDEMNLRVWKAHA-SEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIA 143 (197)
Q Consensus 92 l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 143 (197)
|+..+ +..|+.|++.. ..+...+..+..- ....|-....+++.+|++
T Consensus 120 L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L----~~~QIInY~~d~~~kW~~ 167 (365)
T 2xzh_A 120 VALVT-DNAVYHWSMEGESQPVKMFDRHSSL----AGCQIINYRTDAKQKWLL 167 (365)
T ss_dssp EEEEE-SSEEEEEESSTTCCCEEEEECCGGG----TTCEEEEEEECTTSCEEE
T ss_pred EEEEc-CCcEEEEcccCCCCCceeeecchhc----ccceEEEEEECCCCCEEE
Confidence 44333 45799999864 3444444433321 123455666777888776
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.49 E-value=2.4 Score=30.77 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=47.1
Q ss_pred CccEEEEEcCC-CcEEEEEccCCCCceeecccCC----CCeEEEEECCCCCEEEEEeC-C---------CcEEEEECCCC
Q psy18074 2 EAFVFTAANED-FNLYSYDIRQLNSPLNVHKDMT----SAVTSVDYSPTGREFVAGGY-D---------KSLRLYLAHQG 66 (197)
Q Consensus 2 ~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~sp~~~~l~~~~~-d---------~~v~i~d~~~~ 66 (197)
++.+++.|+.+ ..+.+||+.........+.... .....+.+ ++..++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 45667776543 4688899863223333332211 12223333 4666666665 2 46889999876
Q ss_pred cccceeecc-c-ccceeEEEEccCCCEEEEEeCC
Q psy18074 67 HSRDIYHTK-R-MQHVTHTVWSLDNKFVISASDE 98 (197)
Q Consensus 67 ~~~~~~~~~-~-~~~v~~v~~~~~~~~l~~~~~d 98 (197)
.-....... . ......+. .+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 422221111 1 11222222 467777777754
No 333
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.20 E-value=1.1 Score=35.43 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=41.7
Q ss_pred CeEEEEECCCCCEEEEEeCC------------CcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEE
Q psy18074 36 AVTSVDYSPTGREFVAGGYD------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 95 (197)
Q Consensus 36 ~v~~~~~sp~~~~l~~~~~d------------~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 95 (197)
..-.|+|+|.|.+++.-..+ ..+.+.+..+++....+.......++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35678999999977664322 2455566667776655544444789999999999988654
No 334
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=90.83 E-value=2 Score=33.93 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=42.2
Q ss_pred CCeEEEEECCCCCEEEEEeC------------CCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEE
Q psy18074 35 SAVTSVDYSPTGREFVAGGY------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 95 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~------------d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~ 95 (197)
...-.|.|+++|.+.++... ...|+.++..+++....+.......++.++|+||+++|+..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45678999999987773321 12577777777776555432223568999999999988765
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.74 E-value=3.8 Score=30.10 Aligned_cols=107 Identities=6% Similarity=0.002 Sum_probs=66.6
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCC--CC-EEEEEeC---CCcEEEEECCCC---cc------ccee--ecc
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT--GR-EFVAGGY---DKSLRLYLAHQG---HS------RDIY--HTK 75 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~--~~-~l~~~~~---d~~v~i~d~~~~---~~------~~~~--~~~ 75 (197)
|.+.+|..+ ....+.+++|-.....+.+..+ .. .+..+.. .+.+.+.++... .. ...+ ...
T Consensus 180 G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 180 GAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp EEEEEEETT--TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred eeEEEEeec--ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 567889887 3556777787655544444221 22 3333332 258889888432 11 0111 011
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecccccc
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ 121 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 121 (197)
..+..-++..++....++.-+.-|.+++||+.++.++..-.-....
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 2355667888888778888899999999999999988765444433
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.41 E-value=3.5 Score=29.11 Aligned_cols=101 Identities=10% Similarity=0.144 Sum_probs=54.4
Q ss_pred ccEEEEEcCC--CcEEEEEccCCCCceeecc---cCCCCeEEEEECCCCCEEEEEeCC----CcEEEEECCCCccccee-
Q psy18074 3 AFVFTAANED--FNLYSYDIRQLNSPLNVHK---DMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHSRDIY- 72 (197)
Q Consensus 3 ~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d----~~v~i~d~~~~~~~~~~- 72 (197)
+.+++.|+.+ ..+.+||+.+ . ....+. ........+.+ ++..++.|+.+ ..+.+||..++.-....
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKD-Y-SWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTT-T-EEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCC-C-CEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 4566677653 5688999875 2 222221 11122233333 56666777654 57888998876532221
Q ss_pred -ecccccceeEEEEccCCCEEEEEeCC------CcEEEEEcCCCc
Q psy18074 73 -HTKRMQHVTHTVWSLDNKFVISASDE------MNLRVWKAHASE 110 (197)
Q Consensus 73 -~~~~~~~v~~v~~~~~~~~l~~~~~d------g~i~vwd~~~~~ 110 (197)
.... .....+.+ +++.++.|+.+ ..+.+||+.+..
T Consensus 88 ~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 88 PPTPR-DSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp CSSCC-BSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCccc-cceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 1111 11122222 56666777654 458889987654
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.68 E-value=6.6 Score=31.72 Aligned_cols=107 Identities=9% Similarity=0.074 Sum_probs=57.2
Q ss_pred CccEEEEEcCC----CcEEEEEccCCCCceeecc---------cCCCCeEEEEECCCCCEEEEEeCC------CcEEEEE
Q psy18074 2 EAFVFTAANED----FNLYSYDIRQLNSPLNVHK---------DMTSAVTSVDYSPTGREFVAGGYD------KSLRLYL 62 (197)
Q Consensus 2 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~d------~~v~i~d 62 (197)
++.+++.|+.+ ..+.+||+.+ .. ...+. ........+.+..++..++.|+.+ ..+.+||
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~-~~-W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHY-DK-IDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECS-SC-EEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred CCEEEEECCCCCCCcCcEEEEECCC-Ce-EEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 46677777643 4588898875 22 33222 111223333443256677777643 3578899
Q ss_pred CCCCcccceeecccccceeEEEEccCCCEEEEEeCCC--cEEEEEcCCCc
Q psy18074 63 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--NLRVWKAHASE 110 (197)
Q Consensus 63 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg--~i~vwd~~~~~ 110 (197)
..++.-...........-.+.+.-.+++.++.|+.++ .+.+||+.+..
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 8875422211111111112233324778888877654 68889987653
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.54 E-value=9.7 Score=32.94 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=59.4
Q ss_pred EEEEEcCCCcEEEEEccCCC-CceeecccCCCCeEEEEECCC------CCEEEEEeC-CCcEEEEECCCCcccceeeccc
Q psy18074 5 VFTAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPT------GREFVAGGY-DKSLRLYLAHQGHSRDIYHTKR 76 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~v~~~~~sp~------~~~l~~~~~-d~~v~i~d~~~~~~~~~~~~~~ 76 (197)
+++.+. ++.+..+.+.... ..... ......|.|+++.|. +..++.|.. |+.++++.+.+.+.+.....+.
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Confidence 444444 4677777776411 11111 123568999999863 357888885 9999999998655443322221
Q ss_pred ccceeEEEEcc--CCCEEEEEeCCCcEEEEEc
Q psy18074 77 MQHVTHTVWSL--DNKFVISASDEMNLRVWKA 106 (197)
Q Consensus 77 ~~~v~~v~~~~--~~~~l~~~~~dg~i~vwd~ 106 (197)
...+.++.+.. ...+|..|-.||.+.-+.+
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 12344444432 3457788888998765544
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.39 E-value=6 Score=30.32 Aligned_cols=54 Identities=4% Similarity=-0.054 Sum_probs=34.6
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEECCCCcc---cc----eeecc----cccceeEEEEccC
Q psy18074 35 SAVTSVDYSPTGR-EFVAGGYDKSLRLYLAHQGHS---RD----IYHTK----RMQHVTHTVWSLD 88 (197)
Q Consensus 35 ~~v~~~~~sp~~~-~l~~~~~d~~v~i~d~~~~~~---~~----~~~~~----~~~~v~~v~~~~~ 88 (197)
...+.|+|.|+|. .++++...|.|++++...... +. .+..+ .......++|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4568899999996 566667889999997542211 11 11111 1356788999996
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=89.33 E-value=4.5 Score=28.78 Aligned_cols=102 Identities=16% Similarity=0.296 Sum_probs=51.4
Q ss_pred CccEEEEEcCC-------CcEEEEEccCCCCceeecccCCC---CeEEEEECCCCCEEEEEeC------CCcEEEEECCC
Q psy18074 2 EAFVFTAANED-------FNLYSYDIRQLNSPLNVHKDMTS---AVTSVDYSPTGREFVAGGY------DKSLRLYLAHQ 65 (197)
Q Consensus 2 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~------d~~v~i~d~~~ 65 (197)
++.+++.|+.+ ..+.+||+.+ . ....+..... ....+. .++..++.|+. ...+.+||+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVA-A-KWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTT-T-EEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCC-C-CEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 45677777654 2477788864 2 2222221111 112222 25666666653 23688999987
Q ss_pred Ccccce--eecccccceeEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy18074 66 GHSRDI--YHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 110 (197)
Q Consensus 66 ~~~~~~--~~~~~~~~v~~v~~~~~~~~l~~~~~d-----g~i~vwd~~~~~ 110 (197)
..-... +.... .....+. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 185 ~~W~~~~~~p~~r-~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 185 GDWKDLAPMKTPR-SMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TEEEEECCCSSCC-BSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CEEEECCCCCCCc-ccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 643222 11111 1112222 256666666543 346788887653
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.87 E-value=4.1 Score=32.91 Aligned_cols=106 Identities=8% Similarity=0.130 Sum_probs=58.1
Q ss_pred CccEEEEEcCCC--cEEEEEccCCCCceeecc------cCCCCeEEEEECCC-CCEEEEEeC--C-----CcEEEEECCC
Q psy18074 2 EAFVFTAANEDF--NLYSYDIRQLNSPLNVHK------DMTSAVTSVDYSPT-GREFVAGGY--D-----KSLRLYLAHQ 65 (197)
Q Consensus 2 ~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~------~~~~~v~~~~~sp~-~~~l~~~~~--d-----~~v~i~d~~~ 65 (197)
++.+++.|+.++ .+.+||+.+ . ....+. .......++.+..+ +..++.|+. + ..+..||+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t-~-~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTE-E-IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTT-T-EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred CCEEEEECCCCCCCCEEEEECCC-C-ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 677888887655 688999875 2 222222 11222234555554 566677765 2 4688999987
Q ss_pred Ccc------cceee--cccccceeEEEEccCCCEEEEEeC--------CCcEEEEEcCCCc
Q psy18074 66 GHS------RDIYH--TKRMQHVTHTVWSLDNKFVISASD--------EMNLRVWKAHASE 110 (197)
Q Consensus 66 ~~~------~~~~~--~~~~~~v~~v~~~~~~~~l~~~~~--------dg~i~vwd~~~~~ 110 (197)
..- ..... ....... +++...+++.++.|+. ...+.+||+.+..
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 761 11111 0111112 2223333667777763 3458899988654
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=87.30 E-value=6.4 Score=28.16 Aligned_cols=97 Identities=10% Similarity=0.001 Sum_probs=53.3
Q ss_pred EEECCCCCEEEEEeCC--------------CcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEe----CCCcE
Q psy18074 40 VDYSPTGREFVAGGYD--------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS----DEMNL 101 (197)
Q Consensus 40 ~~~sp~~~~l~~~~~d--------------~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~----~dg~i 101 (197)
--+++++.+|+.+... ..|+..++..+...... .. . ...|++++++|+-.. ....|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~-~~---~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD-PD---P--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE-CS---C--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee-cC---C--ccEEEEeCCEEEEEeecCCCCceE
Confidence 3457889988876543 35777777766532222 21 1 236788999988655 33455
Q ss_pred EEEEcCCCceeeeeccccccccccccccceecccCcccceeeeecCcceEEeec
Q psy18074 102 RVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNA 155 (197)
Q Consensus 102 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~i~~~ 155 (197)
..-++.... ...+.... ..+++++++.|...+++.-.|+.+
T Consensus 132 y~~~~dGs~-~~~lt~~~------------~~~~~~~g~~iy~t~~g~~~Iy~~ 172 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHY------------LFTCNTSDRYFYYNNPKNGQLYRY 172 (302)
T ss_dssp EEEETTSCC-CEEEESSC------------CCCSEEETTEEEEECTTTCCEEEE
T ss_pred EEEECCCCC-eEEEeCCC------------ceEeeEECCEEEEEeCCCceEEEE
Confidence 555665322 23332221 134677777777554443344443
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.92 E-value=12 Score=29.81 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=41.9
Q ss_pred CccEEEE-EcCCCcEEEEEccCCC-----C------c-eeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCC
Q psy18074 2 EAFVFTA-ANEDFNLYSYDIRQLN-----S------P-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 65 (197)
Q Consensus 2 ~~~~l~~-~~~d~~i~i~d~~~~~-----~------~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~ 65 (197)
||+++++ |-.+.++.++|.++.. . . ..... -.-...-.+|.++|.-+.+-.-|..|..|++..
T Consensus 333 DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 333 DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 6666655 5668889999987421 1 1 11122 233467789999995555666899999999974
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.85 E-value=1.7 Score=36.56 Aligned_cols=37 Identities=8% Similarity=0.167 Sum_probs=31.9
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYV 115 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 115 (197)
.+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4667777888889999999999999999999887754
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.41 E-value=4.5 Score=34.06 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=31.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee
Q psy18074 36 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 36 ~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
.+.+++..++..++++-+.|+.+++|++.++.++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677778888889999999999999999998876654
No 346
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=84.54 E-value=12 Score=28.76 Aligned_cols=106 Identities=6% Similarity=0.006 Sum_probs=68.8
Q ss_pred CcEEEEEccCCCCceeecccCCCCeEEEEECCCC--C-EEEEEeC---CCcEEEEECCCC---cc------ccee--ecc
Q psy18074 13 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG--R-EFVAGGY---DKSLRLYLAHQG---HS------RDIY--HTK 75 (197)
Q Consensus 13 ~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~-~l~~~~~---d~~v~i~d~~~~---~~------~~~~--~~~ 75 (197)
|.+.+|..+ ....+.+.+|-.....+.+..+. . .+..+.. .+.+.+.++... .. ...+ ...
T Consensus 179 G~mQLYS~e--r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~ 256 (494)
T 1bpo_A 179 GAMQLYSVD--RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (494)
T ss_dssp EEEEEEEST--TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred ceEEEeecc--ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence 567889887 35567788887666555553321 2 3334433 378999988542 11 0111 111
Q ss_pred cccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeeccccc
Q psy18074 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120 (197)
Q Consensus 76 ~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 120 (197)
..+...++..++....++.-+.-|.+++||+.++.++..-.-...
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~ 301 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 301 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCC
Confidence 235567788888888888889999999999999998876544333
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=84.06 E-value=9.9 Score=27.42 Aligned_cols=50 Identities=12% Similarity=0.252 Sum_probs=26.5
Q ss_pred CccEEEEEcC-C---------CcEEEEEccCCCCceeecccC----CCCeEEEEECCCCCEEEEEeCC
Q psy18074 2 EAFVFTAANE-D---------FNLYSYDIRQLNSPLNVHKDM----TSAVTSVDYSPTGREFVAGGYD 55 (197)
Q Consensus 2 ~~~~l~~~~~-d---------~~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~d 55 (197)
++.+++.|+. + ..+.+||+.+ . ....+... .....++. .++..++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~-~-~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT-N-SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTT-T-EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCC-C-cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 4667777765 2 4688899875 2 22222211 11222233 366777777754
No 348
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.36 E-value=14 Score=32.95 Aligned_cols=104 Identities=5% Similarity=0.000 Sum_probs=63.2
Q ss_pred CCCcEEEEEccCCCCceeecccCCCCeEEEEEC--CCCCEE-EEEe---CCCcEEEEECCCC---cc------cceeec-
Q psy18074 11 EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS--PTGREF-VAGG---YDKSLRLYLAHQG---HS------RDIYHT- 74 (197)
Q Consensus 11 ~d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~s--p~~~~l-~~~~---~d~~v~i~d~~~~---~~------~~~~~~- 74 (197)
-.|.+.+|.... ...+.+.+|-+....+... +....+ ..+. ..+.+.+-++... .. ...+..
T Consensus 177 v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~ 254 (1630)
T 1xi4_A 177 VVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP 254 (1630)
T ss_pred ccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc
Confidence 347788888873 4456677776665555442 222233 3222 2368888888542 11 111111
Q ss_pred -ccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeec
Q psy18074 75 -KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVN 116 (197)
Q Consensus 75 -~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 116 (197)
.......++..++....+...+.-|.++++|+.++.++..-.
T Consensus 255 ~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 255 EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred ccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 112445567777777777888899999999999998876443
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.99 E-value=1.7 Score=37.25 Aligned_cols=37 Identities=8% Similarity=0.167 Sum_probs=30.6
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeee
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYV 115 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 115 (197)
.+.+++..++..++++-+.|+.+++|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666778889999999999999999999887664
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=80.70 E-value=5.4 Score=31.63 Aligned_cols=60 Identities=5% Similarity=-0.002 Sum_probs=38.0
Q ss_pred ceeEEEEccCCCEEEEEeCC------------CcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee
Q psy18074 79 HVTHTVWSLDNKFVISASDE------------MNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
..-.|.|+|.|+++++-..+ +.+.+.+..+++....+.... .+.++.++|+||++.|..+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-------gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-------GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-------TCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-------CccCcCeeECCCCCEEEEE
Confidence 45678999999977664432 234555555666544443322 2346899999999877543
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=77.42 E-value=12 Score=29.71 Aligned_cols=61 Identities=5% Similarity=-0.009 Sum_probs=38.4
Q ss_pred cceeEEEEccCCCEEEEEeC------------CCcEEEEEcCCCceeeeeccccccccccccccceecccCcccceeeee
Q psy18074 78 QHVTHTVWSLDNKFVISASD------------EMNLRVWKAHASEKLGYVNNKQRQALDYSESLKQKYAHHPQIRRIARH 145 (197)
Q Consensus 78 ~~v~~v~~~~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 145 (197)
.....|.|.++|.+.++... .+.+..++..+++....+..... ..++.++|+||++.|...
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-------aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-------CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-------CEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-------ccccCCEECCCCCEEEEE
Confidence 45678999999988774322 12466666666665443322211 225899999999887643
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=74.66 E-value=7 Score=31.80 Aligned_cols=36 Identities=8% Similarity=0.376 Sum_probs=28.6
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEEcCCCceeeeecc
Q psy18074 80 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNN 117 (197)
Q Consensus 80 v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 117 (197)
|.++. .+..++++-+.|..+++|++.+++++....-
T Consensus 224 Is~~~--~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKL--FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEE--ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEec--cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44443 4578999999999999999999998776544
No 353
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=69.85 E-value=26 Score=24.69 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=49.2
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeec--ccCCCCeEEEEECCCCCEEEEEeC----CC-------cEEEEECCCCcccc
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGY----DK-------SLRLYLAHQGHSRD 70 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~----d~-------~v~i~d~~~~~~~~ 70 (197)
.+++.|+. .+..||..+ .. .... ..............++..++.|+. ++ .+..||..++.-..
T Consensus 17 ~i~~~GG~--~~~~yd~~~-~~-W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 92 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPME-NE-CYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG 92 (318)
T ss_dssp EEEEECSS--EEEEEETTT-TE-EEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEE
T ss_pred hhhhcccc--ceEEECCCC-Cc-eecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE
Confidence 45556653 488899875 22 2221 111112222233446777777773 11 17788887664322
Q ss_pred e--eecccccceeEEEEccCCCEEEEEeCC-------CcEEEEEcCCCc
Q psy18074 71 I--YHTKRMQHVTHTVWSLDNKFVISASDE-------MNLRVWKAHASE 110 (197)
Q Consensus 71 ~--~~~~~~~~v~~v~~~~~~~~l~~~~~d-------g~i~vwd~~~~~ 110 (197)
. +.... .....+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 93 ~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 138 (318)
T 2woz_A 93 LPPLPSAR-CLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAK 138 (318)
T ss_dssp CSCBSSCB-CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred CCCCCccc-cccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCC
Confidence 2 11111 11122222 56666666643 347788887653
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=68.46 E-value=3.8 Score=35.22 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=28.9
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee
Q psy18074 37 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 37 v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
+.+++..++...+++-+.|+.+++|++.++.++...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445556677889999999999999999998776553
No 355
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=67.90 E-value=40 Score=26.01 Aligned_cols=75 Identities=8% Similarity=-0.073 Sum_probs=52.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy18074 35 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~ 110 (197)
....++..|+....++..+.-|.+++||+.++.++-.-.. ....|..-+.+....-++.....|.|.--.+....
T Consensus 259 DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI-s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 259 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred CceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc-cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 4567888888888888899999999999999987655322 22455555555555666666677776666555443
No 356
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=63.62 E-value=58 Score=26.38 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=53.8
Q ss_pred EEcCCCcEEEEEccCCCCceeecc-----cCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecc----ccc
Q psy18074 8 AANEDFNLYSYDIRQLNSPLNVHK-----DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK----RMQ 78 (197)
Q Consensus 8 ~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~----~~~ 78 (197)
.|+.+ -+..||..+ .. ...+. .....|.++....++...+ ++.. -|..|+..++......... ...
T Consensus 117 igt~~-Gl~~~~~~~-~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~ 191 (758)
T 3ott_A 117 LGALN-GLYTYQLQS-RK-LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNL 191 (758)
T ss_dssp EEETT-EEEEEETTT-CC-EEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSC
T ss_pred EEcCC-cceeEeCCC-Ce-EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccc
Confidence 34444 477788764 22 22221 1134688888887777555 4444 4778887766432211111 113
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy18074 79 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 79 ~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~ 110 (197)
.|.++...+++..|..|+. +-+..+|..+++
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4788887777664444443 347788877654
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.69 E-value=15 Score=30.01 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=27.4
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCccccee
Q psy18074 37 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 72 (197)
Q Consensus 37 v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 72 (197)
|.++.+ +..++++-+.|..+++|++.++.++...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 555544 4779999999999999999998876654
No 358
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=60.00 E-value=42 Score=23.57 Aligned_cols=104 Identities=4% Similarity=-0.038 Sum_probs=63.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCC---Cce--eecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcc-------cc
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLN---SPL--NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS-------RD 70 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~---~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~-------~~ 70 (197)
..+++..+.+|.++...+.... .-. ..+.. ...+..+........++..+..|.++.+....-.. ..
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 4577888889999988875431 111 11222 34565655555566788888899988887642111 11
Q ss_pred eeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy18074 71 IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 107 (197)
Q Consensus 71 ~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~ 107 (197)
.+.......|..+...+++.+++..+..|.++...+.
T Consensus 159 ~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 159 GIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp CCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1111122456555555556788888899998888764
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=57.67 E-value=75 Score=25.74 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=45.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy18074 36 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 36 ~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~~~ 110 (197)
.|.++...+++..|..|+. +-+..++..++...... ......|.++....+|.+.+.. .+| +.+++..++.
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~g~lWigT-~~G-l~~~~~~~~~ 262 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTE-AFHNNSIKSLALDGNGDLLAGT-DNG-LYVYHNDTTP 262 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEE-EEEEEEEEEEEECTTCCEEEEE-TTE-EEEECCTTSC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEecc-CCCCCeEEEEEEcCCCCEEEEe-CCc-eeEEecCCCc
Confidence 4788888777765555554 45888998776543221 1112468888888888776543 444 7788876554
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=55.40 E-value=68 Score=24.54 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=47.7
Q ss_pred EEEEEcCCCcEEEEEccCC--CCceeecc---------cCCCCeEEEEECCC----CCEEEEEeC--C----------Cc
Q psy18074 5 VFTAANEDFNLYSYDIRQL--NSPLNVHK---------DMTSAVTSVDYSPT----GREFVAGGY--D----------KS 57 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~--~~~~~~~~---------~~~~~v~~~~~sp~----~~~l~~~~~--d----------~~ 57 (197)
+|++ ...|.|++++.... ..++..+. ..+.....|+++|+ +..+++-+. + ..
T Consensus 29 l~V~-er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~ 107 (463)
T 2wg3_C 29 LFIL-EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILR 107 (463)
T ss_dssp EEEE-ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEE
T ss_pred EEEE-eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceE
Confidence 5555 45789999975421 11222111 11456889999996 333333221 1 13
Q ss_pred EEEEECCCC----------cccceee---cccccceeEEEEccCCCEEEEEeCC
Q psy18074 58 LRLYLAHQG----------HSRDIYH---TKRMQHVTHTVWSLDNKFVISASDE 98 (197)
Q Consensus 58 v~i~d~~~~----------~~~~~~~---~~~~~~v~~v~~~~~~~~l~~~~~d 98 (197)
|.-|.+..+ +.+.... ..| ....++|.|||.+.++.++.
T Consensus 108 v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 108 VVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTSCEEEEECCT
T ss_pred EEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCCcEEEEeCCC
Confidence 444665431 1111111 123 35789999999877765543
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.96 E-value=58 Score=22.79 Aligned_cols=88 Identities=9% Similarity=0.027 Sum_probs=43.4
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCE
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF 91 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 91 (197)
||.|+.|-....++.-... .-...|..++...+ ..+.-. +|.|+.|-......+... ......|..++.....
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~-~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~-- 152 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPA-EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYT-- 152 (282)
T ss_dssp TTEEEEEECCTTSTTCCCG-GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSE--
T ss_pred CCEEEEeeCCCCCCCCCCc-ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCE--
Confidence 7778777765322211100 11235666666432 233334 888888876542222111 1112456666554332
Q ss_pred EEEEeCCCcEEEEEcC
Q psy18074 92 VISASDEMNLRVWKAH 107 (197)
Q Consensus 92 l~~~~~dg~i~vwd~~ 107 (197)
.+... +|.++.|-..
T Consensus 153 ~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 153 ALAVK-NGGVIAWGDN 167 (282)
T ss_dssp EEEEE-TTEEEEEECC
T ss_pred EEEEE-CCEEEEecCC
Confidence 22233 6888888654
No 362
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.99 E-value=74 Score=22.26 Aligned_cols=89 Identities=8% Similarity=-0.011 Sum_probs=48.9
Q ss_pred CCcEEEEEccCCCCceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCE
Q psy18074 12 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF 91 (197)
Q Consensus 12 d~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~ 91 (197)
||.|+.|-....++.-... .....|..++...+...+ -. ||.|+.|-......+... ..-...|..++......
T Consensus 119 ~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~hs- 192 (282)
T 3qhy_B 119 DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGGIFHS- 192 (282)
T ss_dssp TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSEE-
T ss_pred CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCCCCc-eecCCCeEEEEecCCEE-
Confidence 8899999776433321111 123457777665433222 33 799999977643222221 11124677776644332
Q ss_pred EEEEeCCCcEEEEEcCC
Q psy18074 92 VISASDEMNLRVWKAHA 108 (197)
Q Consensus 92 l~~~~~dg~i~vwd~~~ 108 (197)
++. .+|.++.|-...
T Consensus 193 ~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 193 LAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EEE--ETTEEEEEECCT
T ss_pred EEE--ECCeEEEEECCC
Confidence 233 589999997653
No 363
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=45.91 E-value=89 Score=24.22 Aligned_cols=56 Identities=9% Similarity=0.067 Sum_probs=35.5
Q ss_pred EEEEEcCCCcEEEEEccCCC-------Cceeecc--cCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy18074 5 VFTAANEDFNLYSYDIRQLN-------SPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRL 60 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~-------~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~v~i 60 (197)
++..|+.+|.|.-.-..... ..+..+. ....+|..+.++++...|+.++..+.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 56778889987543332111 1122222 23578999999999999999988776554
No 364
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=40.93 E-value=57 Score=19.47 Aligned_cols=25 Identities=24% Similarity=0.432 Sum_probs=13.7
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAH 107 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~ 107 (197)
..+.+..+|++++.. .++. .+|...
T Consensus 63 ~~l~l~~dGNLVl~d-~~~~-~lW~S~ 87 (119)
T 1b2p_A 63 CRAVLQPDGVLVVIT-NENV-TVWQSP 87 (119)
T ss_dssp CEEEECTTSCEEEEC-TTCC-EEEECS
T ss_pred eEEEEccCCEEEEEe-CCCc-EEEcCC
Confidence 345667777766553 2333 467543
No 365
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=40.58 E-value=55 Score=19.26 Aligned_cols=61 Identities=11% Similarity=-0.036 Sum_probs=28.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy18074 46 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 46 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
+.+.+.-..||.+.+|+...+..+.............+.+..+|++++... ++.+ +|...+
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-~~~~-iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD-RLNT-VFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT-TSCE-EEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC-CCCE-EEECCC
Confidence 333344445555555554222222221111111224567777888766533 3443 676544
No 366
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=40.55 E-value=2.1e+02 Score=26.03 Aligned_cols=72 Identities=8% Similarity=-0.084 Sum_probs=44.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEECCCCcccceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy18074 36 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 36 ~v~~~~~sp~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
...++..|+....++..+.-|.+++||+.++.++-.-.. ....|...+-+.....++.....|.|.--.+..
T Consensus 260 fpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri-s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI-SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred cceEEEeccccCEEEEEecCceEEEEecccchhhhhccc-cCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 455677788777888888999999999999987544311 123444444444334445445566555544443
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=40.46 E-value=1e+02 Score=22.42 Aligned_cols=52 Identities=4% Similarity=0.016 Sum_probs=27.2
Q ss_pred cEEEEEcCCCcEEEEEccCCCCceeec--ccCCCCeEEEEECC-CCCEEEEEeCCC
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSP-TGREFVAGGYDK 56 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~sp-~~~~l~~~~~d~ 56 (197)
..|.+|+..| +.+++....+.....+ ......|.+|+++| +...++.++..+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 3566666666 6666543212333322 12245699999998 333444444444
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=37.88 E-value=1.2e+02 Score=22.50 Aligned_cols=105 Identities=10% Similarity=0.109 Sum_probs=59.4
Q ss_pred ccEEEEEcCCCcEEEEEccCCCCceeecc----cC--------------CCCeEEEEECCC----CCEEEEEeCCC-cEE
Q psy18074 3 AFVFTAANEDFNLYSYDIRQLNSPLNVHK----DM--------------TSAVTSVDYSPT----GREFVAGGYDK-SLR 59 (197)
Q Consensus 3 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~--------------~~~v~~~~~sp~----~~~l~~~~~d~-~v~ 59 (197)
+..+++=...+-|.+||+.+ ++..+.+. .. ...+..++++|+ ++.|+.....+ .++
T Consensus 171 ~~aYItD~~~~gLIVydl~~-~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly 249 (381)
T 3q6k_A 171 TFVYITNFLRGALFIYDHKK-QDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVY 249 (381)
T ss_dssp EEEEEEETTTTEEEEEETTT-TEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEE
T ss_pred cEEEEEcCCCCcEEEEECCC-CcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEE
Confidence 44555555667789999876 33333321 00 136888999997 67777665554 333
Q ss_pred EEE---CCCCccccee-ecccc---cceeEEEEc-cCCCEEEEEeCCCcEEEEEcCC
Q psy18074 60 LYL---AHQGHSRDIY-HTKRM---QHVTHTVWS-LDNKFVISASDEMNLRVWKAHA 108 (197)
Q Consensus 60 i~d---~~~~~~~~~~-~~~~~---~~v~~v~~~-~~~~~l~~~~~dg~i~vwd~~~ 108 (197)
--. ++.......+ ..+.. ..-...++. .+|..+++--..+.|..|+..+
T Consensus 250 ~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 250 SVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 322 1222111111 11111 223345665 5777777777888999999875
No 369
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=37.59 E-value=1.3e+02 Score=22.48 Aligned_cols=123 Identities=11% Similarity=0.045 Sum_probs=73.3
Q ss_pred CCeEEEEECCCCCEEEE--Ee-------------CCCcEEEEECCCC--cccceeecc-----cccceeEEEEc---cC-
Q psy18074 35 SAVTSVDYSPTGREFVA--GG-------------YDKSLRLYLAHQG--HSRDIYHTK-----RMQHVTHTVWS---LD- 88 (197)
Q Consensus 35 ~~v~~~~~sp~~~~l~~--~~-------------~d~~v~i~d~~~~--~~~~~~~~~-----~~~~v~~v~~~---~~- 88 (197)
-.|..+...+.+.+-+. |- ....|.+||+.++ +.+..+... ..+....+++. |.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 35788888877664443 21 1236889999998 776665221 23567788877 22
Q ss_pred ---CCEEEEEe-CCCcEEEEEcCCCceeeeecccc----ccccccc------cccceecccCcc----cceeeeecCcce
Q psy18074 89 ---NKFVISAS-DEMNLRVWKAHASEKLGYVNNKQ----RQALDYS------ESLKQKYAHHPQ----IRRIARHRQVPR 150 (197)
Q Consensus 89 ---~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~----~~~~~~~------~~~v~~~~~s~~----~~~l~~~~~~~~ 150 (197)
+.+++... ..+.|.|+|+.+++.-....... ...+..+ ...+..++++|+ ++.|.-+.-...
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 33444433 46779999999887655442110 0001001 235778888987 778876665666
Q ss_pred EEeecch
Q psy18074 151 HIYNAQA 157 (197)
Q Consensus 151 ~i~~~~~ 157 (197)
.+|....
T Consensus 247 ~ly~V~T 253 (381)
T 3q6k_A 247 KVYSVNT 253 (381)
T ss_dssp EEEEEEH
T ss_pred cEEEEEH
Confidence 6666543
No 370
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=36.16 E-value=65 Score=18.80 Aligned_cols=25 Identities=12% Similarity=0.295 Sum_probs=14.3
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy18074 81 THTVWSLDNKFVISASDEMNLRVWKAH 107 (197)
Q Consensus 81 ~~v~~~~~~~~l~~~~~dg~i~vwd~~ 107 (197)
..+.+..+|++++... ++. .+|...
T Consensus 53 ~~l~l~~dGNLVl~~~-~~~-~~W~S~ 77 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQ-SNR-VIWQTK 77 (110)
T ss_dssp CEEEECTTSCEEEECT-TCC-EEEECC
T ss_pred EEEEEeCCCCEEEECC-CCc-EEEecC
Confidence 3466777787766532 333 467643
No 371
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=33.71 E-value=1.8e+02 Score=23.11 Aligned_cols=39 Identities=10% Similarity=0.189 Sum_probs=29.6
Q ss_pred ceeEEEEcc-CCCEEEEEeCCCcEEEEEcCCCceeeeecccc
Q psy18074 79 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGYVNNKQ 119 (197)
Q Consensus 79 ~v~~v~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 119 (197)
.++++.+.+ ++++|+++..- .|...|. +++.+..+.+..
T Consensus 356 HiNsv~~d~~dd~~liSsR~~-~I~~Id~-tG~V~W~LGg~~ 395 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQ-GVVKIGR-DKQVKWILAPSK 395 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTT-EEEEEET-TSCEEEEESCST
T ss_pred EecceeEcCCCCEEEEECCcc-EEEEEcC-CCcEEEEECCCC
Confidence 489999988 55788887777 7777785 788888876654
No 372
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=30.50 E-value=99 Score=24.26 Aligned_cols=57 Identities=9% Similarity=-0.045 Sum_probs=35.4
Q ss_pred cEEEEEcCCCcEEEEEccCCCC---ceeec--ccCCCCeE-EEEECCCCCEEEEEeCCCcEEE
Q psy18074 4 FVFTAANEDFNLYSYDIRQLNS---PLNVH--KDMTSAVT-SVDYSPTGREFVAGGYDKSLRL 60 (197)
Q Consensus 4 ~~l~~~~~d~~i~i~d~~~~~~---~~~~~--~~~~~~v~-~~~~sp~~~~l~~~~~d~~v~i 60 (197)
.++..|+.+|.|.-..+..... ....+ .....+|. .+.+++++..|+.++..+.+++
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4677788899876544432111 12222 12245775 8899999899988887765544
No 373
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=29.49 E-value=1.5e+02 Score=23.32 Aligned_cols=68 Identities=16% Similarity=0.145 Sum_probs=39.2
Q ss_pred CeEEEEECCCC--CEEEEEeCCCcEEEEECCCCc----ccceeec-cccccee-EEEEccCCCEEEEEeCCCcEEE
Q psy18074 36 AVTSVDYSPTG--REFVAGGYDKSLRLYLAHQGH----SRDIYHT-KRMQHVT-HTVWSLDNKFVISASDEMNLRV 103 (197)
Q Consensus 36 ~v~~~~~sp~~--~~l~~~~~d~~v~i~d~~~~~----~~~~~~~-~~~~~v~-~v~~~~~~~~l~~~~~dg~i~v 103 (197)
.++.++....+ ..++.|+.+|.|.-..+..+. ....+.. ....+|. .+.++++..+|+.++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35555554433 355678889977765553221 1111111 1135674 8889999999988887664443
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=28.35 E-value=2e+02 Score=23.39 Aligned_cols=60 Identities=10% Similarity=0.087 Sum_probs=36.9
Q ss_pred cEEEEEcCCCcEE-EEEccCCC-C-----ceeec--ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC
Q psy18074 4 FVFTAANEDFNLY-SYDIRQLN-S-----PLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 64 (197)
Q Consensus 4 ~~l~~~~~d~~i~-i~d~~~~~-~-----~~~~~--~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~ 64 (197)
.++..|+.+|.|. +....... . .+..+ .....+|..+.++++...|+.++..+.+++ .+.
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV-Pl~ 498 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL-PLH 498 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE-ESC
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE-Ehh
Confidence 3567788888875 33222101 0 11111 134567899999999999999998886654 444
No 375
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=27.53 E-value=2.2e+02 Score=22.72 Aligned_cols=55 Identities=5% Similarity=-0.051 Sum_probs=0.0
Q ss_pred EEEEEcCCCcEEEEEccCCCC--------ceeecccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q psy18074 5 VFTAANEDFNLYSYDIRQLNS--------PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60 (197)
Q Consensus 5 ~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i 60 (197)
++..|+.+|.|.-.-... .. ....+.....+|..+.++++...|+.++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~-~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPG-EQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCC-SSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecC-CCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
No 376
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.15 E-value=2.1e+02 Score=22.39 Aligned_cols=68 Identities=12% Similarity=0.067 Sum_probs=40.2
Q ss_pred CeEEEEECC-CC-CEEEEEeCCCcEEEEECC-CCc--ccceeecccccce-eEEEEccCCCEEEEEeCCCcEEE
Q psy18074 36 AVTSVDYSP-TG-REFVAGGYDKSLRLYLAH-QGH--SRDIYHTKRMQHV-THTVWSLDNKFVISASDEMNLRV 103 (197)
Q Consensus 36 ~v~~~~~sp-~~-~~l~~~~~d~~v~i~d~~-~~~--~~~~~~~~~~~~v-~~v~~~~~~~~l~~~~~dg~i~v 103 (197)
..+.|+... ++ ..++.|+.+|.|.-.-+. .+. ....+......+| ..+.++++..+|+.++..+.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 355555543 23 345568888988755543 211 1222222233567 48889999999988887776554
No 377
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.34 E-value=2.5e+02 Score=21.75 Aligned_cols=68 Identities=7% Similarity=0.002 Sum_probs=39.8
Q ss_pred CeEEEEECC----CCC--EEEEEeCCCcEEEEECCCC-c-------ccceeec-ccccceeEEEEccCCCEEEEEeCCCc
Q psy18074 36 AVTSVDYSP----TGR--EFVAGGYDKSLRLYLAHQG-H-------SRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMN 100 (197)
Q Consensus 36 ~v~~~~~sp----~~~--~l~~~~~d~~v~i~d~~~~-~-------~~~~~~~-~~~~~v~~v~~~~~~~~l~~~~~dg~ 100 (197)
..+.|+... ++. .++.|+.+|.|.-.-+..+ . .+..+.. ....+|..+.++++..+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 346655532 233 4567888997765444321 1 1111111 12367899999999999999887775
Q ss_pred EEE
Q psy18074 101 LRV 103 (197)
Q Consensus 101 i~v 103 (197)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 378
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.89 E-value=86 Score=20.70 Aligned_cols=33 Identities=6% Similarity=0.207 Sum_probs=22.2
Q ss_pred cceeEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy18074 78 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE 110 (197)
Q Consensus 78 ~~v~~v~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 110 (197)
..+.++.|...+. .+++.+.++++.++|..-|+
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 4455566655432 35566778999999998665
No 379
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=22.53 E-value=3.1e+02 Score=22.21 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=34.5
Q ss_pred EEEEEcCCCcEEEE-EccCCCCceeec--ccCCCCeEEEEECCCC--CEEEEEeCCCcEEE
Q psy18074 5 VFTAANEDFNLYSY-DIRQLNSPLNVH--KDMTSAVTSVDYSPTG--REFVAGGYDKSLRL 60 (197)
Q Consensus 5 ~l~~~~~d~~i~i~-d~~~~~~~~~~~--~~~~~~v~~~~~sp~~--~~l~~~~~d~~v~i 60 (197)
++..|+.+|.|.-. ........+..+ .....+|..+.++++. ..|+.++..+.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67788889987533 333211111111 1235688899999987 88888877664443
No 380
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=22.09 E-value=2.3e+02 Score=20.45 Aligned_cols=105 Identities=7% Similarity=0.003 Sum_probs=63.9
Q ss_pred CccEEEEEcCCCcEEEEEccCCCCc----e--eecccCCCCeEEEEECCCCCEEEEEeCCCcEEEEECC--CCcc-----
Q psy18074 2 EAFVFTAANEDFNLYSYDIRQLNSP----L--NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH--QGHS----- 68 (197)
Q Consensus 2 ~~~~l~~~~~d~~i~i~d~~~~~~~----~--~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~v~i~d~~--~~~~----- 68 (197)
+..+++..+.+|.++.-.+...... . ..+.. ...+..+........++..+..|.+..+... .-..
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 3567888889999998876532111 1 12333 3445555444455678888889988888776 2111
Q ss_pred --cceeecccccceeEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy18074 69 --RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 107 (197)
Q Consensus 69 --~~~~~~~~~~~v~~v~~~~~~~~l~~~~~dg~i~vwd~~ 107 (197)
...+.......|.++...+++.+++..+..|.++.-.+.
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 011111223556666665666788888999988877654
No 381
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=20.20 E-value=2e+02 Score=19.34 Aligned_cols=60 Identities=18% Similarity=0.285 Sum_probs=36.6
Q ss_pred EeCCCcEEEEECCCCcccceeecccccceeEEEEccC---CCEEEEEeCCCcEEEEEcCCCceeeee
Q psy18074 52 GGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASEKLGYV 115 (197)
Q Consensus 52 ~~~d~~v~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~ 115 (197)
.-.+|.|.+-+..++.++..... .+........ ..+-+.-...|.+.|=.+.+++++...
T Consensus 104 ~~p~G~VqFvN~~TgtCL~ay~n----Gvv~~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~ 166 (206)
T 1sr4_A 104 GKHREYFRFVNQSLGTCVEAYGN----GLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYN 166 (206)
T ss_dssp CSSTTCEEEEETTTCCEEEEETT----EEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEEC
T ss_pred ecCCCEEEEEECCCCceeeeccC----CeEEecCCCCCcccEEEEecCCCccEEEEECCCCccCCcc
Confidence 46678888888888887766422 2322222221 123334455778888888888888764
Done!