Your job contains 1 sequence.
>psy18074
MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL
YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR
QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG
TVPQTKERQRAVVKEME
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18074
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036500 - symbol:CG7275 species:7227 "Drosophila m... 640 1.1e-62 1
UNIPROTKB|Q6NVS5 - symbol:dcaf13 "DDB1- and CUL4-associat... 621 1.2e-60 1
UNIPROTKB|Q7ZYQ6 - symbol:dcaf13 "DDB1- and CUL4-associat... 620 1.5e-60 1
ZFIN|ZDB-GENE-040426-703 - symbol:dcaf13 "ddb1 and cul4 a... 609 2.2e-59 1
UNIPROTKB|Q5ZLK1 - symbol:DCAF13 "DDB1- and CUL4-associat... 603 9.3e-59 1
RGD|1308458 - symbol:Dcaf13 "DDB1 and CUL4 associated fac... 585 7.5e-57 1
MGI|MGI:2684929 - symbol:Dcaf13 "DDB1 and CUL4 associated... 584 9.6e-57 1
UNIPROTKB|Q9NV06 - symbol:DCAF13 "DDB1- and CUL4-associat... 580 2.5e-56 1
UNIPROTKB|F1P9T8 - symbol:DCAF13 "Uncharacterized protein... 578 4.2e-56 1
UNIPROTKB|Q5R4T8 - symbol:DCAF13 "DDB1- and CUL4-associat... 573 1.4e-55 1
UNIPROTKB|F1S1E1 - symbol:DCAF13 "Uncharacterized protein... 572 1.8e-55 1
WB|WBGene00022742 - symbol:ZK430.7 species:6239 "Caenorha... 517 1.2e-49 1
POMBASE|SPBC1A4.07c - symbol:SPBC1A4.07c "U3 snoRNP-assoc... 516 1.5e-49 1
TAIR|locus:2121328 - symbol:AT4G28450 "AT4G28450" species... 507 1.4e-48 1
SGD|S000003934 - symbol:SOF1 "Essential protein required ... 477 2.1e-45 1
ASPGD|ASPL0000009210 - symbol:AN4226 species:162425 "Emer... 459 1.7e-43 1
DICTYBASE|DDB_G0276815 - symbol:DDB_G0276815 "WD repeat-c... 418 3.7e-39 1
CGD|CAL0005164 - symbol:SOF1 species:5476 "Candida albica... 409 3.4e-38 1
UNIPROTKB|Q5A7Q9 - symbol:SOF1 "Putative uncharacterized ... 409 3.4e-38 1
GENEDB_PFALCIPARUM|PFD0455w - symbol:PFD0455w "ribosomal ... 403 1.5e-37 1
UNIPROTKB|Q9U0J4 - symbol:PFD0455w "40S ribosomal process... 403 1.5e-37 1
UNIPROTKB|F1MVI8 - symbol:F1MVI8 "Uncharacterized protein... 172 2.8e-12 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 112 0.00021 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 112 0.00023 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 112 0.00025 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 112 0.00025 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 112 0.00025 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 112 0.00025 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 112 0.00025 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 112 0.00025 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 111 0.00030 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 111 0.00037 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 110 0.00039 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 110 0.00039 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 110 0.00040 1
ZFIN|ZDB-GENE-050706-71 - symbol:eml2 "echinoderm microtu... 117 0.00042 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 111 0.00045 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 112 0.00045 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 112 0.00047 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 112 0.00047 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 109 0.00052 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 109 0.00057 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 108 0.00067 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 109 0.00067 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 109 0.00078 1
>FB|FBgn0036500 [details] [associations]
symbol:CG7275 species:7227 "Drosophila melanogaster"
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006911 EMBL:AE014296 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00390000005711
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AY058590
RefSeq:NP_648767.1 UniGene:Dm.4153 SMR:Q9VUN7 STRING:Q9VUN7
EnsemblMetazoa:FBtr0075547 GeneID:39669 KEGG:dme:Dmel_CG7275
UCSC:CG7275-RA FlyBase:FBgn0036500 InParanoid:Q9VUN7
OrthoDB:EOG49S4NW GenomeRNAi:39669 NextBio:814787 Uniprot:Q9VUN7
Length = 446
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 118/196 (60%), Positives = 150/196 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF FT ANED NLY++D R+L +PL VH D SAVT VDYSPTG+EFV+ YDK++R+
Sbjct: 249 MEAFNFTVANEDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSASYDKTIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
Y AH HSRDIYHTKRMQHV WSLDN++V S SDEMN+R+WKA+ASEKLG + ++R
Sbjct: 309 YNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFSGSDEMNVRMWKANASEKLGVIRPRER 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
+Y E+LKQKYA HPQI+RIARHRQVPRH+ NAQ + R ++ K++ KE+N R H+
Sbjct: 369 VNFNYQEALKQKYAAHPQIKRIARHRQVPRHVLNAQKKMRTVKEKEQVKEANVRKHTKKS 428
Query: 181 T-VPQTKERQRAVVKE 195
VP E+++ V+KE
Sbjct: 429 KKVPYVSEKKKHVLKE 444
>UNIPROTKB|Q6NVS5 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 CTD:25879 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF InterPro:IPR007287
Pfam:PF04158 EMBL:CR855579 EMBL:BC067929 RefSeq:NP_998858.1
UniGene:Str.7604 ProteinModelPortal:Q6NVS5 STRING:Q6NVS5
GeneID:407967 KEGG:xtr:407967 Xenbase:XB-GENE-5791289
InParanoid:Q6NVS5 Uniprot:Q6NVS5
Length = 445
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 108/197 (54%), Positives = 153/197 (77%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANE+FNLY+YD+R ++ P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ GHSR++YHTKRMQHVT WS DNK+V+ SDEMN+R+WKA+ASEKLG ++ ++R
Sbjct: 309 FPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGLLSPRER 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A +Y++ LK+K+ HHPQI+RIARHR +PR IY+ E + +R +++K+ N+R HS PG
Sbjct: 369 AAQNYNQKLKEKFHHHPQIKRIARHRHLPRSIYSQIKEQQIMREARRKKDVNRRKHSKPG 428
Query: 181 TVPQTKERQRAVVKEME 197
+VP E+++ V+ +E
Sbjct: 429 SVPIPSEKKKHVLAVVE 445
>UNIPROTKB|Q7ZYQ6 [details] [associations]
symbol:dcaf13 "DDB1- and CUL4-associated factor 13"
species:8355 "Xenopus laevis" [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:BC042261 RefSeq:NP_001080629.1 UniGene:Xl.21976
ProteinModelPortal:Q7ZYQ6 GeneID:380321 KEGG:xla:380321
Xenbase:XB-GENE-5791341 Uniprot:Q7ZYQ6
Length = 445
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 108/197 (54%), Positives = 153/197 (77%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANE+FNLY+YD+R ++SP+ VH D SAV VDYSPTG+E V+ +DKS+R+
Sbjct: 249 MEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTGKELVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ GHSR++YHTKRMQHVT WS DNK+V+ SDEMN+R+WKA+ASEKLG ++ ++R
Sbjct: 309 FPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKANASEKLGVLSPRER 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A +Y++ LK+K+ HHPQI+RIARHR +PR IY+ E + +R +++K+ N+R HS PG
Sbjct: 369 AAQNYNQKLKEKFQHHPQIKRIARHRHLPRSIYSQIKEQQIMREARRKKDVNRRKHSKPG 428
Query: 181 TVPQTKERQRAVVKEME 197
+VP E+++ V+ +E
Sbjct: 429 SVPIPSEKKKHVLAVVE 445
>ZFIN|ZDB-GENE-040426-703 [details] [associations]
symbol:dcaf13 "ddb1 and cul4 associated factor 13"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
ZFIN:ZDB-GENE-040426-703 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:BC044155 IPI:IPI00618021
RefSeq:NP_956423.1 UniGene:Dr.79195 ProteinModelPortal:Q803X4
STRING:Q803X4 GeneID:393097 KEGG:dre:393097 InParanoid:Q803X4
NextBio:20814171 ArrayExpress:Q803X4 Uniprot:Q803X4
Length = 445
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 107/197 (54%), Positives = 150/197 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEA+ FT ANED+NLY+YDIR L+ P+ VH D SAV VDYSPTGREFV+ +DK++R+
Sbjct: 249 MEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTGREFVSASFDKTIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ +GHSR++YHTKRMQHV WS D+KF++S SDEMN+R+WKA+ASEKLG ++ +++
Sbjct: 309 FPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKANASEKLGVLSTREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A +Y++ L QK+ HHPQ+RRIARHR +PR + + E + ++ ++RKE N R HS PG
Sbjct: 369 TAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEARRRKEQNVRKHSKPG 428
Query: 181 TVPQTKERQRAVVKEME 197
+VP E+++ VVK +E
Sbjct: 429 SVPLLTEKEKHVVKVVE 445
>UNIPROTKB|Q5ZLK1 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008
EMBL:AJ719733 IPI:IPI00588762 RefSeq:NP_001026119.1
UniGene:Gga.15424 ProteinModelPortal:Q5ZLK1 STRING:Q5ZLK1
Ensembl:ENSGALT00000025898 GeneID:420263 KEGG:gga:420263 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 InParanoid:Q5ZLK1 KO:K11806 OMA:CASDRSI
OrthoDB:EOG4T4CVF NextBio:20823203 InterPro:IPR007287 Pfam:PF04158
Uniprot:Q5ZLK1
Length = 445
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 104/193 (53%), Positives = 150/193 (77%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANED+NLY++D+R L SP+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSVRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ +GHSR++YHTKRMQHV W+ D+++++ SDEMN+R+WKA+ASEKLG + +++
Sbjct: 309 FPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWKANASEKLGVLAPREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A++Y++ LK+K+ HHPQI+RIARHR +P+ IY E R +R ++RKE N+R HS PG
Sbjct: 369 AAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREARRRKELNRRKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+VP E+++ +V
Sbjct: 429 SVPVVSEKKKHIV 441
>RGD|1308458 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13" species:10116
"Rattus norvegicus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308458 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 InterPro:IPR007287
Pfam:PF04158 IPI:IPI00393552 RefSeq:NP_001167029.1 UniGene:Rn.41457
ProteinModelPortal:F1M7P1 Ensembl:ENSRNOT00000005803 GeneID:362902
KEGG:rno:362902 UCSC:RGD:1308458 NextBio:681728 ArrayExpress:F1M7P1
Uniprot:F1M7P1
Length = 445
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 101/193 (52%), Positives = 148/193 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF FTAANED+NLY++D+R L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFNFTAANEDYNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHT+RMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + +++R
Sbjct: 309 FPVDKSRSREVYHTRRMQHVICVKWTSDSKYILCGSDEMNIRLWKANASEKLGVLTSRER 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ +HP ++RIARHR +P+ IY+ E R ++ ++RKE N+R HS PG
Sbjct: 369 AANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+VP ER++ VV
Sbjct: 429 SVPVVSERKKHVV 441
>MGI|MGI:2684929 [details] [associations]
symbol:Dcaf13 "DDB1 and CUL4 associated factor 13"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:2684929 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016567 GO:GO:0030529
GO:GO:0006364 GO:GO:0080008 EMBL:AC164883 CTD:25879
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
HOVERGEN:HBG056998 KO:K11806 OMA:CASDRSI OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AC165352 EMBL:BC060375
IPI:IPI00129701 RefSeq:NP_941008.2 UniGene:Mm.321937
ProteinModelPortal:Q6PAC3 SMR:Q6PAC3 STRING:Q6PAC3
PhosphoSite:Q6PAC3 PaxDb:Q6PAC3 PRIDE:Q6PAC3
Ensembl:ENSMUST00000022909 GeneID:223499 KEGG:mmu:223499
UCSC:uc007voc.2 InParanoid:Q6PAC3 NextBio:376735 Bgee:Q6PAC3
CleanEx:MM_WDSOF1 Genevestigator:Q6PAC3 Uniprot:Q6PAC3
Length = 445
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 101/193 (52%), Positives = 148/193 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF FTAANED+NLY++D+R L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHTKRMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + ++++
Sbjct: 309 FPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ +HP ++RIARHR +P+ IY+ E R ++ ++RKE N+R HS PG
Sbjct: 369 AANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEARRRKEMNRRKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+VP ER++ VV
Sbjct: 429 SVPIVSERKKHVV 441
>UNIPROTKB|Q9NV06 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016567 GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOGENOM:HOG000210082 HOVERGEN:HBG056998 KO:K11806 OrthoDB:EOG4T4CVF
InterPro:IPR007287 Pfam:PF04158 EMBL:AF161549 EMBL:AK001874
EMBL:AK027799 EMBL:AK074725 EMBL:BC026067 EMBL:BC101810
EMBL:BC112042 IPI:IPI00306642 IPI:IPI00747916 RefSeq:NP_056235.4
UniGene:Hs.532265 ProteinModelPortal:Q9NV06 SMR:Q9NV06
STRING:Q9NV06 PhosphoSite:Q9NV06 DMDM:160358731 PaxDb:Q9NV06
PeptideAtlas:Q9NV06 PRIDE:Q9NV06 Ensembl:ENST00000297579
GeneID:25879 KEGG:hsa:25879 UCSC:uc003ylm.1 GeneCards:GC08P104426
H-InvDB:HIX0201273 HGNC:HGNC:24535 neXtProt:NX_Q9NV06
PharmGKB:PA165585440 InParanoid:Q9NV06 ChiTaRS:DCAF13
GenomeRNAi:25879 NextBio:47292 ArrayExpress:Q9NV06 Bgee:Q9NV06
CleanEx:HS_WDSOF1 Genevestigator:Q9NV06 Uniprot:Q9NV06
Length = 445
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 100/193 (51%), Positives = 148/193 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANED+NLY++D+R L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHTKRMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + ++++
Sbjct: 309 FPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ H+P I+RIARHR +P+ IY+ E R ++ ++RKE N+ HS PG
Sbjct: 369 AAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+VP E+++ VV
Sbjct: 429 SVPLVSEKKKHVV 441
>UNIPROTKB|F1P9T8 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 CTD:25879
GeneTree:ENSGT00390000005711 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 EMBL:AAEX03008708
RefSeq:XP_532299.2 Ensembl:ENSCAFT00000001031 GeneID:475065
KEGG:cfa:475065 Uniprot:F1P9T8
Length = 445
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 103/197 (52%), Positives = 149/197 (75%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANED+NLY++D+R L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHTKRMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + ++++
Sbjct: 309 FPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ HHP I+RIARHR +P+ IY+ E R ++ ++RKE N+ HS PG
Sbjct: 369 AAKDYNQKLKEKFQHHPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRLKHSKPG 428
Query: 181 TV---PQTKERQRAVVK 194
+V P+ K+ AVVK
Sbjct: 429 SVSIVPEKKKHIVAVVK 445
>UNIPROTKB|Q5R4T8 [details] [associations]
symbol:DCAF13 "DDB1- and CUL4-associated factor 13"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0030529 GO:GO:0006364 GO:GO:0080008 CTD:25879
HOVERGEN:HBG056998 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:CR861153 RefSeq:NP_001126898.1 UniGene:Pab.18251
ProteinModelPortal:Q5R4T8 GeneID:100173913 KEGG:pon:100173913
InParanoid:Q5R4T8 Uniprot:Q5R4T8
Length = 445
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 99/193 (51%), Positives = 147/193 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANED+NLY++D+ L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANEDYNLYTFDMSALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHTKRMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + ++++
Sbjct: 309 FPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ H+P I+RIARHR +P+ IY+ E R ++ ++RKE N+ HS PG
Sbjct: 369 AAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVNRIKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+VP E+++ VV
Sbjct: 429 SVPIVSEKKKHVV 441
>UNIPROTKB|F1S1E1 [details] [associations]
symbol:DCAF13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:CU469011
Ensembl:ENSSSCT00000006637 Uniprot:F1S1E1
Length = 445
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 98/193 (50%), Positives = 147/193 (76%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF+FTAANED+NLY++D+R L++P+ VH D SAV VDYSPTG+EFV+ +DKS+R+
Sbjct: 249 MEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSASFDKSIRI 308
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + SR++YHTKRMQHV W+ D+K+++ SDEMN+R+WKA+ASEKLG + ++++
Sbjct: 309 FPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKLGVLTSREK 368
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
A DY++ LK+K+ HHP I+RI+RHR +P+ IY+ E R ++ ++RKE N+ HS PG
Sbjct: 369 AATDYNQRLKEKFQHHPHIKRISRHRHLPKSIYSQIQEQRIMKEARRRKELNRIKHSKPG 428
Query: 181 TVPQTKERQRAVV 193
+V E+++ +V
Sbjct: 429 SVRIVSEKKKHIV 441
>WB|WBGene00022742 [details] [associations]
symbol:ZK430.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040039 "inductive cell migration"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040039
GO:GO:0007276 GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:FO080155
PIR:T27863 RefSeq:NP_494781.1 ProteinModelPortal:Q23494 SMR:Q23494
STRING:Q23494 PaxDb:Q23494 EnsemblMetazoa:ZK430.7.1
EnsemblMetazoa:ZK430.7.2 GeneID:173778 KEGG:cel:CELE_ZK430.7
UCSC:ZK430.7.1 CTD:173778 WormBase:ZK430.7 InParanoid:Q23494
NextBio:881057 Uniprot:Q23494
Length = 444
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 91/170 (53%), Positives = 129/170 (75%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEA+ FT A+ED++LY++D+R + P+ H+ TSAV VDYSPTG+EFVA GYD+S+RL
Sbjct: 246 MEAYNFTVASEDYSLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQEFVAAGYDRSIRL 305
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ A SRD+Y+TKRM V +WS D+KFV+S S+EMN+RVWKA+A+EKLG + +++
Sbjct: 306 FKARDMTSRDVYYTKRMASVLSVLWSADSKFVLSGSNEMNIRVWKANAAEKLGPLTKREK 365
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKE 170
QA Y+E L+ Y +HP++RRIA+HR VPRHI+ A EH+ IR + R++
Sbjct: 366 QAFAYNEKLRDTYKNHPEVRRIAKHRNVPRHIFTAAKEHKLIRDARGRRD 415
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 97/193 (50%), Positives = 133/193 (68%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF F A +ED NLY YD+R L L+V+KD SAV SVD+SPTG+EFV+G YDK++R+
Sbjct: 240 MEAFNFVAGSEDHNLYMYDMRNLKRALHVYKDHVSAVMSVDFSPTGQEFVSGSYDKTIRI 299
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
Y +GHSRD+YHTKRMQ VT +S+D +++ S SD+ N+R+W+A AS + + ++
Sbjct: 300 YNVREGHSRDVYHTKRMQRVTAVKFSMDAQYIFSGSDDSNVRLWRARASSRASIRSTREE 359
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
L Y +SL+++Y H P+IRRIARHR +P ++ A R + KR+E N R HS G
Sbjct: 360 NRLKYLDSLRERYKHIPEIRRIARHRHLPTNVKKAAEIKREEINSLKRREENIRRHSKKG 419
Query: 181 TVPQTKERQRAVV 193
VP KER+R VV
Sbjct: 420 AVPYEKERERHVV 432
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 95/197 (48%), Positives = 137/197 (69%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
ME TAANED + YS+D R+L+ VHKD SAV +D+SPTGREFV G YD+S+R+
Sbjct: 256 MEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRI 315
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ + GHSR+IYHTKRMQ V +S D +VIS SD+ NLR+WKA ASE+LG + +++
Sbjct: 316 FPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKAKASEQLGVILPREQ 375
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
+ +Y+E++K +Y H +++RI RHR +P+ IY A R + ++RKE+ ++ HSAPG
Sbjct: 376 KKHEYNEAVKNRYKHLSEVKRIVRHRHLPKPIYKAMGIIRTVNDSKRRKEARRKAHSAPG 435
Query: 181 TVPQTKERQRAVVKEME 197
TV R+R ++KE+E
Sbjct: 436 TVVTAPLRKRKIIKEVE 452
>SGD|S000003934 [details] [associations]
symbol:SOF1 "Essential protein required for biogenesis of the
40S ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000003934 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006945 GO:GO:0030686 EMBL:X91488 GO:GO:0032040
GeneTree:ENSGT00390000005711 HOGENOM:HOG000210082 KO:K11806
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 OrthoDB:EOG4GXJWG
EMBL:X70052 EMBL:Z73116 PIR:S35323 RefSeq:NP_013090.1
ProteinModelPortal:P33750 SMR:P33750 DIP:DIP-746N IntAct:P33750
MINT:MINT-635582 STRING:P33750 PaxDb:P33750 PeptideAtlas:P33750
EnsemblFungi:YLL011W GeneID:850649 KEGG:sce:YLL011W CYGD:YLL011w
NextBio:966596 Genevestigator:P33750 GermOnline:YLL011W
GO:GO:0000462 Uniprot:P33750
Length = 489
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 92/193 (47%), Positives = 128/193 (66%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF F ANED N Y YD+R L+ LNV KD SAV VD+SPTG E V G YDKS+R+
Sbjct: 272 MEAFNFVTANEDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRI 331
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
Y + GHSR+IYHTKRMQHV +S+D+K++IS SD+ N+R+W++ A E+ +++
Sbjct: 332 YKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWERSNVKTTREK 391
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
L+Y E LK+++ H P+I+RI+RHR VP+ I AQ S KR+E+N+R
Sbjct: 392 NKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIKNIELSSIKRREANERRTRKD- 450
Query: 181 TVPQTKERQRAVV 193
+P ER++ +V
Sbjct: 451 -MPYISERKKQIV 462
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 89/196 (45%), Positives = 131/196 (66%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF F ANED N+Y +D+R++N LNV KD +AV VD+SPTG E V YD+++RL
Sbjct: 250 MEAFNFAVANEDHNVYMFDMRKMNRALNVLKDHVAAVMDVDFSPTGEELVTASYDRTIRL 309
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ GHSRDIYHT+RMQ V ++ DNK+V+S SD+ N+R+W+A+AS++ G + +QR
Sbjct: 310 WNRATGHSRDIYHTQRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRANASDRSGIKSARQR 369
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPG 180
L+Y ++L Q+YAH P+I+RI R R VPR I A+ + KR+E N R H+
Sbjct: 370 TKLEYDQALVQRYAHMPEIKRIKRQRHVPRTIKKAREIKNEELAAIKRREENIRKHAKKS 429
Query: 181 TV-PQTKERQRAVVKE 195
T+ + ER++ ++ +
Sbjct: 430 TLRARQSEREKMILAQ 445
>DICTYBASE|DDB_G0276815 [details] [associations]
symbol:DDB_G0276815 "WD repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 dictyBase:DDB_G0276815 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0016567 GO:GO:0030529
EMBL:AAFI02000019 GO:GO:0006364 GO:GO:0080008 KO:K11806 OMA:CASDRSI
InterPro:IPR007287 Pfam:PF04158 RefSeq:XP_642903.1
ProteinModelPortal:Q7KWL3 STRING:Q7KWL3 EnsemblProtists:DDB0168265
GeneID:8620769 KEGG:ddi:DDB_G0276815 Uniprot:Q7KWL3
Length = 445
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 72/186 (38%), Positives = 124/186 (66%)
Query: 2 EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 61
E+F ANED N+Y YDIR L+ + VH+D +V +DYSPTGRE V+G YDK++R++
Sbjct: 251 ESFTLAIANEDENVYQYDIRNLSKAMTVHRDHVGSVLDIDYSPTGREIVSGSYDKTIRIF 310
Query: 62 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQ 121
SR++Y+T RMQ + +++ D++F++S SD+MN+RVWKA++S LG ++N++++
Sbjct: 311 PVDSYKSREVYYTNRMQRIFSVLFTADSRFILSGSDDMNIRVWKANSSAPLGILSNREKE 370
Query: 122 ALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSAPGT 181
L+Y + +K+K+ P+++ IA HR+VP+ +Y + I ++R+ N +S G
Sbjct: 371 KLEYQDKIKEKFKEIPELKTIATHRRVPQLVYKRRFIKNEIHKAKQRRVKNISNNS--GK 428
Query: 182 VPQTKE 187
P+ ++
Sbjct: 429 SPKVEK 434
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 76/165 (46%), Positives = 107/165 (64%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF F NED N Y YD+R L L V+K A+ VD++PTG+E V G YDK++RL
Sbjct: 272 MEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRL 331
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ G S+D+YHTKRMQ V +S D+K++IS SD+ NLRVW++ AS + +++QR
Sbjct: 332 WKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDASSRSNIKSSRQR 391
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSK 165
L+Y + LK++Y + P+I RIARHR +P+ + AQ R K
Sbjct: 392 AKLEYQDKLKERYKYMPEINRIARHRHLPKPVKKAQDMKRLYSKK 436
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 76/165 (46%), Positives = 107/165 (64%)
Query: 1 MEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 60
MEAF F NED N Y YD+R L L V+K A+ VD++PTG+E V G YDK++RL
Sbjct: 272 MEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMDVDFAPTGQELVTGSYDKTIRL 331
Query: 61 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQR 120
+ G S+D+YHTKRMQ V +S D+K++IS SD+ NLRVW++ AS + +++QR
Sbjct: 332 WKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSDDTNLRVWRSDASSRSNIKSSRQR 391
Query: 121 QALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSK 165
L+Y + LK++Y + P+I RIARHR +P+ + AQ R K
Sbjct: 392 AKLEYQDKLKERYKYMPEINRIARHRHLPKPVKKAQDMKRLYSKK 436
>GENEDB_PFALCIPARUM|PFD0455w [details] [associations]
symbol:PFD0455w "ribosomal processing protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0000154
"rRNA modification" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/191 (42%), Positives = 121/191 (63%)
Query: 6 FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 65
F ANED NLYS+D+R L + VHK +AV VD+SP G +FVA YDK++RL+ + +
Sbjct: 292 FVIANEDSNLYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVRLFNSDE 351
Query: 66 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDY 125
S D+YHTKRMQHV +S D K+V + S +M+LR+WK + E G ++NK++QA++Y
Sbjct: 352 PTSYDVYHTKRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKEKQAINY 411
Query: 126 SESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSA-PGTVPQ 184
LK+K+A +I+RI +H VP I + + + + +KRKE NK HS P +P
Sbjct: 412 RNKLKEKFASLKEIKRIRQHHHVPALIKSLSDKKKVMLEAKKRKEKNKIQHSKNPEQLP- 470
Query: 185 TKERQRAVVKE 195
E+++ V E
Sbjct: 471 IPEKKKIFVTE 481
>UNIPROTKB|Q9U0J4 [details] [associations]
symbol:PFD0455w "40S ribosomal processing protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000154
"rRNA modification" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AL844503
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 GO:GO:0000154 GO:GO:0005732 RefSeq:XP_001351406.1
ProteinModelPortal:Q9U0J4 EnsemblProtists:PFD0455w:mRNA
GeneID:812403 KEGG:pfa:PFD0455w EuPathDB:PlasmoDB:PF3D7_0409200
ProtClustDB:CLSZ2433499 Uniprot:Q9U0J4
Length = 482
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/191 (42%), Positives = 121/191 (63%)
Query: 6 FTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 65
F ANED NLYS+D+R L + VHK +AV VD+SP G +FVA YDK++RL+ + +
Sbjct: 292 FVIANEDSNLYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVRLFNSDE 351
Query: 66 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDY 125
S D+YHTKRMQHV +S D K+V + S +M+LR+WK + E G ++NK++QA++Y
Sbjct: 352 PTSYDVYHTKRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKEKQAINY 411
Query: 126 SESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKRTHSA-PGTVPQ 184
LK+K+A +I+RI +H VP I + + + + +KRKE NK HS P +P
Sbjct: 412 RNKLKEKFASLKEIKRIRQHHHVPALIKSLSDKKKVMLEAKKRKEKNKIQHSKNPEQLP- 470
Query: 185 TKERQRAVVKE 195
E+++ V E
Sbjct: 471 IPEKKKIFVTE 481
>UNIPROTKB|F1MVI8 [details] [associations]
symbol:F1MVI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 GeneTree:ENSGT00390000005711
EMBL:DAAA02039320 EMBL:DAAA02039321 EMBL:DAAA02039322
IPI:IPI00686597 Ensembl:ENSBTAT00000028594 OMA:ECESHHI
Uniprot:F1MVI8
Length = 449
Score = 172 (65.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 52/199 (26%), Positives = 97/199 (48%)
Query: 1 MEAFVFTAANEDF-NLYSY-DIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL 58
MEAF+FTAANED+ NL S + +++P+ H S+ + Y R F +D +
Sbjct: 249 MEAFIFTAANEDYKNLTSVISMTLIDNPVLFHFKHCSSSCQIKYQNVSRAF--SNFDMYV 306
Query: 59 RL-YLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLR-VWKAHASEKLGY 114
++ R+ Y HTK+ Q V+ ++L+ ++ S N+R K+G
Sbjct: 307 SFKHIPKDSQRRERYNYHTKKHQRVSLLGFALNMHKMLCKSQHTNIRGCILQELIFKVGK 366
Query: 115 VNNKQRQALDYSESLKQKYAHHPQIRRIARHRQVPRHIYNAQAEHRAIRSKQKRKESNKR 174
+N ++ Y+ ++K P+++++A H P + + +A + + +E N+
Sbjct: 367 NSNAVKKLPQYNNTIKHSKRFCPKMQKVAAHITTPECESHHIHKTKASKLTKVSRELNRI 426
Query: 175 THSAPGTVPQTKERQRAVV 193
HS PG+V E+++ VV
Sbjct: 427 KHSKPGSVQMVSEKKKHVV 445
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 112 (44.5 bits), Expect = 0.00021, P = 0.00021
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 19 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 77
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 78 SASDDKTLKIWDVSSGKCL 96
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFV-AGGYDKSLRLYL 62
V ++ D +L +DI + PL V+K+ T SVD+S T G + V +G +D++ +L+
Sbjct: 80 VLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWD 139
Query: 63 AHQGHSRDIYHTKRMQHVTH-TVWS--LDNKFVISASDEMNLRVWKAHA 108
G S + K + V + T+WS + F SAS + LR+W A
Sbjct: 140 PAVGKSLRTF--KGHEGVIYSTIWSPHIPGCFA-SASGDQTLRIWDVKA 185
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 112 (44.5 bits), Expect = 0.00025, P = 0.00025
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV+SV +SP G + DK ++++ A+ G ++ ++ WS D+ ++
Sbjct: 45 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLV 103
Query: 94 SASDEMNLRVWKAHASEKL 112
SASD+ L++W + + L
Sbjct: 104 SASDDKTLKIWDVSSGKCL 122
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 111 (44.1 bits), Expect = 0.00030, P = 0.00030
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 30 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSL 87
HKD AVT V++SP+G +G DK++R+++ + ++ HT ++ V H +
Sbjct: 60 HKD---AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV-H--FCS 113
Query: 88 DNKFVISASDEMNLRVWKAH 107
D + +++ASD+ ++VW H
Sbjct: 114 DGQLLVTASDDKTVKVWSTH 133
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 111 (44.1 bits), Expect = 0.00037, P = 0.00037
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 34 TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVI 93
T AV++V +SP G + DK ++++ A+ G ++ ++ WS D++ ++
Sbjct: 72 TKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSRLLV 130
Query: 94 SASDEMNLRVWKAHASEKL 112
S SD+ L+VW+ + L
Sbjct: 131 SGSDDKTLKVWELSTGKSL 149
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFV-AGGYDKSLRLYL 62
V + D +L +D + PL V+K+ T V SVD+S T G + V +G +D++++++
Sbjct: 77 VLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD 136
Query: 63 AHQGHSRDIYHTKRMQHVTHTVWS--LDNKFVISASDEMNLRVW 104
G+S + + T+WS + F SAS + LR+W
Sbjct: 137 PTVGNSLCTFRGHESV-IYSTIWSPHIPGCFA-SASGDQTLRIW 178
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFV-AGGYDKSLRLYL 62
V + D +L +D + PL V+K+ T V SVD+S T G + V +G +D++++++
Sbjct: 77 VLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD 136
Query: 63 AHQGHSRDIYHTKRMQHVTHTVWS--LDNKFVISASDEMNLRVW 104
G+S + + T+WS + F SAS + LR+W
Sbjct: 137 PTVGNSLCTFRGHESV-IYSTIWSPHIPGCFA-SASGDQTLRIW 178
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 110 (43.8 bits), Expect = 0.00040, P = 0.00040
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFV-AGGYDKSLRLYL 62
+ + D +L +D + PL V+K+ T V SVD+S T G + V +G +D++++L+
Sbjct: 82 ILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Query: 63 AHQGHSRDIYHTKRMQHVTHTVWS--LDNKFVISASDEMNLRVW 104
G S + + T+WS + F SAS + LR+W
Sbjct: 142 PTVGKSLCTFRGHESV-IYSTIWSPHIPGCFA-SASGDQTLRIW 183
>ZFIN|ZDB-GENE-050706-71 [details] [associations]
symbol:eml2 "echinoderm microtubule associated
protein like 2" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001610
ZFIN:ZDB-GENE-050706-71 GO:GO:0007165 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR011047
SUPFAM:SSF50998 SMART:SM00086 InterPro:IPR005108 Pfam:PF03451
GeneTree:ENSGT00550000074369 EMBL:CABZ01014980 EMBL:CU657967
EMBL:CU929111 IPI:IPI00503692 ProteinModelPortal:F1R7V9
Ensembl:ENSDART00000017268 ArrayExpress:F1R7V9 Bgee:F1R7V9
Uniprot:F1R7V9
Length = 833
Score = 117 (46.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 19 DIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY-LAHQG--HSRDIYHTK 75
D R L +++H D ++ V YSP G G +D + +Y + G +SR T
Sbjct: 632 DTRDL---VSMHTDGNEIISVVKYSPDGAYLAVGSHDNFVYIYSVTENGKKYSRVGKCTG 688
Query: 76 RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGYVNNKQRQALDYSES 128
VTH WS D++F+++ S + + W+A + + + NN + L+++ S
Sbjct: 689 HSSFVTHLDWSTDSQFIVTNSGDYEILYWEASSGKHI--TNNDIVRNLEWATS 739
Score = 35 (17.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 147 QVPRHIYNAQAEH 159
+ P HIY + H
Sbjct: 792 RAPSHIYGGHSSH 804
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 111 (44.1 bits), Expect = 0.00045, P = 0.00045
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 30 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSL 87
HKD AVT V++SP+G +G DK++R+++ + ++ HT ++ V H +
Sbjct: 60 HKD---AVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSV-H--FCS 113
Query: 88 DNKFVISASDEMNLRVWKAHASEKL 112
D + +++ASD+ ++VW H + L
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQKFL 138
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 8 AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH 67
+ ++D LY + Q N + + V V YSP + + +DKS+RL+ A G
Sbjct: 350 SCSDDNTLYLWRNNQ-NKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ 408
Query: 68 SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 112
+ +Q V WS D++ ++S S + L+VW ++KL
Sbjct: 409 YMATFRG-HVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ-TKKL 451
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 8 AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH 67
+ ++DF L+ + + PL + + V +SP R + +DKS++L+ G
Sbjct: 359 SGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGK 418
Query: 68 SRDIYHTKRMQHVT---HTVWSLDNKFVISASDEMNLRVWKAHASEKL 112
Y T HV+ WS D++ ++S S + L+VW A ++KL
Sbjct: 419 ----YLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAE-TKKL 461
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 8 AANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH 67
+A++D L +D ++ P+ V +SP GR +D S+RL+ G
Sbjct: 363 SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLW---DGK 419
Query: 68 SRDIYHTKR--MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGY 114
+ T R + V WS D++ ++S+S + L+VW S+K+ +
Sbjct: 420 TGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVR-SKKMKF 467
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 109 (43.4 bits), Expect = 0.00052, P = 0.00052
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGRE--FVAGGYDKSLRLYL 62
V + D +L +D + PL V+K+ T V SVD+S T E V+G +D++++++
Sbjct: 77 VLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWD 136
Query: 63 AHQGHSRDIYHTKRMQHVTHTVWS--LDNKFVISASDEMNLRVW 104
G+S + + T+WS + F SAS + LR+W
Sbjct: 137 PTVGNSLCTFRGHESV-IYSTIWSPHIPGCFA-SASGDQTLRIW 178
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 109 (43.4 bits), Expect = 0.00057, P = 0.00057
Identities = 21/81 (25%), Positives = 45/81 (55%)
Query: 31 KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-SRDIYHTKRMQHVTHTVWSLDN 89
K +++SV +SP G+ + DK+++++ A+ G R + K + ++ WS D+
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHK--EGISDIAWSQDS 100
Query: 90 KFVISASDEMNLRVWKAHASE 110
K + SASD+ +++W + +
Sbjct: 101 KLICSASDDKTIKIWDVESGK 121
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 108 (43.1 bits), Expect = 0.00067, P = 0.00067
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 5 VFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFV-AGGYDKSLRLYL 62
V + D +L +D PL V+K+ T V SVD+S T G + V +G +D++++L+
Sbjct: 82 VLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Query: 63 AHQGHSRDIYHTKRMQHVTH-TVWS--LDNKFVISASDEMNLRVW 104
G S + K + + + T+WS + F SAS + LR+W
Sbjct: 142 PTVGRSLCTF--KGHESIIYSTIWSPHIPGCFA-SASGDQTLRIW 183
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 30 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH-QGHSRDIY-HTKRMQHVTHTVWSL 87
HKD AVT V++SP+G +G DK++R+++ + +G S HT ++ V H +
Sbjct: 91 HKD---AVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSV-H--FCS 144
Query: 88 DNKFVISASDEMNLRVWKAHASEKL 112
D + ++ASD+ ++VW H + L
Sbjct: 145 DGQSFVTASDDKTIKVWSTHRQKFL 169
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 109 (43.4 bits), Expect = 0.00078, P = 0.00078
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 30 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSL 87
HKD AVT V++SP+G +G DK++R+++ + ++ HT ++ V H +
Sbjct: 60 HKD---AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV-H--FCS 113
Query: 88 DNKFVISASDEMNLRVWKAH 107
D + +++ASD+ ++VW H
Sbjct: 114 DGQSLVTASDDKTVKVWSTH 133
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.127 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.47 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 584 (62 KB)
Total size of DFA: 166 KB (2098 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.59u 0.07s 23.66t Elapsed: 00:00:09
Total cpu time: 23.59u 0.07s 23.66t Elapsed: 00:00:09
Start: Thu Aug 15 12:02:11 2013 End: Thu Aug 15 12:02:20 2013