Your job contains 1 sequence.
>psy18075
MAAALVLEDDEGECSDEEQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQS
HNTSNQSHSVSQLKQHSVTDFLAAPSVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLA
IMKVSSLVPSTTTLQSLTVLSCSLMKSTVSLKTENLVFVLTKNHCAYHVDRYLESMLLAI
MKVSSLVPSTTTLPSSSLFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSF
KINYNLNGCMTAVRLLSEAKLLPSLTESQLLACMKLMDEKKTLVIKVPISGFLNGEVETF
VPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDI
LKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNA
AKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFG
PIGVEGLADLLRSSCCFALEELKLNNNGLGITGCKLLSKALHDCYESSKKEGSPLALKVF
IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND
NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEIS
VQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVLEDDEGECSDE
EQDEESEEENDSDAEGDNSNLSHNDSNHSHNASNQSHNNSNQSHNTSNQSHSVSQLKQHS
VTDFLAAPSVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLAIMKVSSLVPSTTTLQSP
SSSLFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAVR
LLSEAKLLPSLTESQLLACMKLMDEKKSRAGIQLDTVIRLCKMFDLSKESSTKGRRTPCQ
QCNMCIILGLLAEKLAGPSSVAMLTQGTLEYLVANLSCT
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy18075
(999 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P46060 - symbol:RANGAP1 "Ran GTPase-activating ... 808 5.0e-89 2
UNIPROTKB|F1MFD5 - symbol:RANGAP1 "Uncharacterized protei... 802 1.2e-87 2
UNIPROTKB|F1NIE8 - symbol:RANGAP1 "Uncharacterized protei... 793 2.1e-86 2
UNIPROTKB|F1PVY6 - symbol:RANGAP1 "Uncharacterized protei... 785 9.2e-86 2
UNIPROTKB|J9NZ28 - symbol:RANGAP1 "Uncharacterized protei... 785 9.2e-86 2
MGI|MGI:103071 - symbol:Rangap1 "RAN GTPase activating pr... 793 1.9e-85 2
UNIPROTKB|F1MAA5 - symbol:Rangap1 "Protein Rangap1" speci... 775 5.7e-84 2
UNIPROTKB|O13066 - symbol:rangap1 "Ran GTPase-activating ... 786 1.2e-83 2
ZFIN|ZDB-GENE-040426-1921 - symbol:rangap1b "Ran GTPase a... 757 3.6e-82 2
RGD|1310380 - symbol:Rangap1 "RAN GTPase activating prote... 785 4.8e-78 1
ZFIN|ZDB-GENE-060929-492 - symbol:rangap1a "RAN GTPase ac... 754 1.5e-77 2
FB|FBgn0003346 - symbol:RanGAP "Ran GTPase activating pro... 723 8.5e-77 2
WB|WBGene00004303 - symbol:ran-2 species:6239 "Caenorhabd... 594 3.9e-57 1
CGD|CAL0000022 - symbol:RNA1 species:5476 "Candida albica... 403 1.1e-36 1
UNIPROTKB|F8W7I9 - symbol:RANGAP1 "Ran GTPase-activating ... 351 1.8e-35 2
POMBASE|SPAC22E12.07 - symbol:rna1 "Ran GAP Rna1" species... 379 4.4e-34 1
ASPGD|ASPL0000071633 - symbol:ranGAP species:162425 "Emer... 360 4.9e-32 1
UNIPROTKB|B0QYT4 - symbol:RANGAP1 "Ran GTPase-activating ... 333 4.0e-29 1
SGD|S000004848 - symbol:RNA1 "GTPase activating protein (... 332 5.1e-29 1
UNIPROTKB|G4MXL7 - symbol:MGG_01248 "Ran GTPase-activatin... 328 1.4e-28 1
UNIPROTKB|H0Y4Q3 - symbol:RANGAP1 "Ran GTPase-activating ... 314 4.4e-27 1
UNIPROTKB|B0QYT5 - symbol:RANGAP1 "Ran GTPase-activating ... 226 1.2e-17 1
UNIPROTKB|Q7RTR2 - symbol:NLRC3 "Protein NLRC3" species:9... 238 4.7e-16 1
TAIR|locus:2099207 - symbol:RANGAP1 "AT3G63130" species:3... 226 2.8e-15 1
ZFIN|ZDB-GENE-061026-2 - symbol:rspry1 "ring finger and S... 134 8.0e-14 2
TAIR|locus:2150285 - symbol:RANGAP2 "AT5G19320" species:3... 209 2.1e-13 1
MGI|MGI:2444070 - symbol:Nlrc3 "NLR family, CARD domain c... 212 3.0e-13 1
MGI|MGI:1921935 - symbol:4930451C15Rik "RIKEN cDNA 493045... 187 2.5e-11 1
UNIPROTKB|Q96P20 - symbol:NLRP3 "NACHT, LRR and PYD domai... 185 2.4e-10 1
ZFIN|ZDB-GENE-050208-711 - symbol:si:ch211-213a13.5 "si:c... 206 2.9e-10 2
UNIPROTKB|B0FPE9 - symbol:NLRP3 "NACHT, LRR and PYD domai... 184 3.0e-10 1
ZFIN|ZDB-GENE-061108-4 - symbol:nod2 "nucleotide-binding ... 182 4.7e-10 1
RGD|1562269 - symbol:Nod1 "nucleotide-binding oligomeriza... 178 1.2e-09 1
WB|WBGene00008876 - symbol:F16A11.1 species:6239 "Caenorh... 139 1.6e-09 2
UNIPROTKB|E2R9L3 - symbol:NOD1 "Uncharacterized protein" ... 175 2.6e-09 1
RGD|1308314 - symbol:Nlrp3 "NLR family, pyrin domain cont... 175 2.8e-09 1
MGI|MGI:1341839 - symbol:Nod1 "nucleotide-binding oligome... 174 3.3e-09 1
MGI|MGI:2653833 - symbol:Nlrp3 "NLR family, pyrin domain ... 173 4.7e-09 1
UNIPROTKB|A6QLE5 - symbol:NLRP3 "NACHT, LRR and PYD domai... 169 1.3e-08 1
MGI|MGI:98640 - symbol:Tcte1 "t-complex-associated testis... 164 1.5e-08 1
UNIPROTKB|P10775 - symbol:RNH1 "Ribonuclease inhibitor" s... 163 1.6e-08 1
UNIPROTKB|Q9Y239 - symbol:NOD1 "Nucleotide-binding oligom... 180 1.8e-08 2
UNIPROTKB|E1B7V7 - symbol:NOD1 "Uncharacterized protein" ... 166 2.4e-08 1
RGD|621398 - symbol:Rnh1 "ribonuclease/angiogenin inhibit... 160 3.4e-08 1
RGD|2321956 - symbol:LOC100360501 "ribonuclease inhibitor... 159 4.4e-08 1
TAIR|locus:2194604 - symbol:emb2004 "embryo defective 200... 160 4.4e-08 2
MGI|MGI:1924108 - symbol:Nlrp14 "NLR family, pyrin domain... 161 8.7e-08 1
UNIPROTKB|Q6E804 - symbol:NOD2 "Nucleotide-binding oligom... 160 1.1e-07 1
UNIPROTKB|E1BR67 - symbol:NOD1 "Uncharacterized protein" ... 159 1.3e-07 1
UNIPROTKB|Q8IZ02 - symbol:LRRC34 "Leucine-rich repeat-con... 153 2.2e-07 2
UNIPROTKB|Q5ZIY8 - symbol:RNH1 "Uncharacterized protein" ... 152 2.6e-07 1
UNIPROTKB|F1P9K0 - symbol:NOD2 "Uncharacterized protein" ... 156 3.1e-07 1
MGI|MGI:1919077 - symbol:Lrrc34 "leucine rich repeat cont... 156 3.3e-07 2
UNIPROTKB|Q86W25 - symbol:NLRP13 "NACHT, LRR and PYD doma... 154 5.2e-07 1
DICTYBASE|DDB_G0282605 - symbol:DDB_G0282605 "Rho GTPase ... 150 5.9e-07 1
TAIR|locus:2083028 - symbol:AT3G06000 species:3702 "Arabi... 138 7.4e-07 1
RGD|1565052 - symbol:Lrrc34 "leucine rich repeat containi... 152 9.8e-07 3
MGI|MGI:3612191 - symbol:Nlrc5 "NLR family, CARD domain c... 170 1.1e-06 2
MGI|MGI:1195456 - symbol:Rnh1 "ribonuclease/angiogenin in... 154 1.3e-06 2
ZFIN|ZDB-GENE-110913-19 - symbol:si:dkey-156k2.3 "si:dkey... 151 1.4e-06 1
UNIPROTKB|E1C3J0 - symbol:LOC100859479 "Uncharacterized p... 150 1.4e-06 2
ZFIN|ZDB-GENE-060421-8264 - symbol:zgc:136791 "zgc:136791... 149 1.6e-06 1
MGI|MGI:2429397 - symbol:Nod2 "nucleotide-binding oligome... 146 3.7e-06 1
DICTYBASE|DDB_G0295827 - symbol:DDB_G0295827 "leucine-ric... 148 6.5e-06 3
RGD|1306368 - symbol:Nod2 "nucleotide-binding oligomeriza... 143 7.8e-06 1
UNIPROTKB|F1NAC7 - symbol:F1NAC7 "Uncharacterized protein... 141 8.8e-06 1
UNIPROTKB|E9PFE0 - symbol:CIITA "MHC class II transactiva... 138 1.2e-05 1
UNIPROTKB|P13489 - symbol:RNH1 "Ribonuclease inhibitor" s... 136 1.5e-05 1
DICTYBASE|DDB_G0293920 - symbol:DDB_G0293920 species:4468... 139 1.7e-05 1
ZFIN|ZDB-GENE-081028-16 - symbol:si:ch211-233m11.1 "si:ch... 140 1.7e-05 1
UNIPROTKB|F1LSE8 - symbol:Ciita "Protein Ciita" species:1... 140 1.7e-05 1
UNIPROTKB|G3V9V5 - symbol:Ciita "Protein Ciita" species:1... 140 1.7e-05 1
DICTYBASE|DDB_G0290439 - symbol:gacW "RhoGAP domain-conta... 140 1.8e-05 1
RGD|619813 - symbol:Ciita "class II, major histocompatibi... 140 1.9e-05 1
UNIPROTKB|G3V6C0 - symbol:Ciita "Class II, major histocom... 140 1.9e-05 1
UNIPROTKB|E1BZ42 - symbol:RSPRY1 "Uncharacterized protein... 136 2.1e-05 1
MGI|MGI:108445 - symbol:Ciita "class II transactivator" s... 139 2.4e-05 1
DICTYBASE|DDB_G0285563 - symbol:DDB_G0285563 "unknown" sp... 130 2.5e-05 1
UNIPROTKB|P33076 - symbol:CIITA "MHC class II transactiva... 138 3.0e-05 1
UNIPROTKB|F1MG35 - symbol:CIITA "Uncharacterized protein"... 138 3.1e-05 1
UNIPROTKB|F1RMK8 - symbol:LOC100622751 "Uncharacterized p... 138 3.2e-05 1
UNIPROTKB|F1PS97 - symbol:NLRP8 "Uncharacterized protein"... 137 3.5e-05 1
UNIPROTKB|Q9HC29 - symbol:NOD2 "Nucleotide-binding oligom... 137 3.5e-05 1
UNIPROTKB|A4IFG8 - symbol:RSPRY1 "RSPRY1 protein" species... 133 4.4e-05 1
UNIPROTKB|E2RSA4 - symbol:RSPRY1 "Uncharacterized protein... 133 4.4e-05 1
UNIPROTKB|Q96DX4 - symbol:RSPRY1 "RING finger and SPRY do... 133 4.4e-05 1
UNIPROTKB|F1RF31 - symbol:RSPRY1 "Uncharacterized protein... 133 4.4e-05 1
MGI|MGI:1914860 - symbol:Rspry1 "ring finger and SPRY dom... 133 4.4e-05 1
RGD|1308847 - symbol:Rspry1 "ring finger and SPRY domain ... 133 4.4e-05 1
UNIPROTKB|Q53B88 - symbol:NOD2 "Nucleotide-binding oligom... 136 4.5e-05 1
MGI|MGI:2676630 - symbol:Nlrp12 "NLR family, pyrin domain... 136 4.6e-05 1
UNIPROTKB|F1NYZ9 - symbol:F1NYZ9 "Uncharacterized protein... 124 4.7e-05 4
MGI|MGI:2387183 - symbol:Lrrc45 "leucine rich repeat cont... 133 5.4e-05 1
ZFIN|ZDB-GENE-070912-120 - symbol:si:ch211-156p11.1 "si:c... 134 6.0e-05 1
UNIPROTKB|Q86W24 - symbol:NLRP14 "NACHT, LRR and PYD doma... 135 6.2e-05 1
UNIPROTKB|Q86W28 - symbol:NLRP8 "NACHT, LRR and PYD domai... 134 7.5e-05 1
RGD|1309415 - symbol:Nlrp12 "NLR family, pyrin domain con... 134 7.6e-05 1
UNIPROTKB|H0YCR7 - symbol:RNH1 "Ribonuclease inhibitor" s... 125 9.1e-05 1
ZFIN|ZDB-GENE-080207-2 - symbol:zgc:174944 "zgc:174944" s... 133 9.3e-05 1
MGI|MGI:3056570 - symbol:Nlrp4b "NLR family, pyrin domain... 132 9.7e-05 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|P46060 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005643 "nuclear pore" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0046826 "negative regulation of protein
export from nucleus" evidence=IDA] [GO:0032853 "positive regulation
of Ran GTPase activity" evidence=TAS] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_115566
GO:GO:0007165 Reactome:REACT_21300 GO:GO:0031965 GO:GO:0005643
GO:GO:0000922 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0000236 GO:GO:0046826 GO:GO:0000777 EMBL:AL035681
Pathway_Interaction_DB:ranbp2pathway eggNOG:COG5238 KO:K14319
GO:GO:0005098 PANTHER:PTHR24113 EMBL:X82260 EMBL:AB058738
EMBL:CR456557 EMBL:BC014044 EMBL:BC041396 IPI:IPI00294879
PIR:JC5300 RefSeq:NP_002874.1 UniGene:Hs.183800 PDB:1Z5S PDB:2GRN
PDB:2GRO PDB:2GRP PDB:2GRQ PDB:2GRR PDB:2IO2 PDB:2IO3 PDB:2IY0
PDB:3UIN PDB:3UIO PDB:3UIP PDBsum:1Z5S PDBsum:2GRN PDBsum:2GRO
PDBsum:2GRP PDBsum:2GRQ PDBsum:2GRR PDBsum:2IO2 PDBsum:2IO3
PDBsum:2IY0 PDBsum:3UIN PDBsum:3UIO PDBsum:3UIP
ProteinModelPortal:P46060 SMR:P46060 DIP:DIP-29079N IntAct:P46060
MINT:MINT-3016328 STRING:P46060 PhosphoSite:P46060 DMDM:1172922
PaxDb:P46060 PRIDE:P46060 DNASU:5905 Ensembl:ENST00000356244
Ensembl:ENST00000405383 Ensembl:ENST00000405486
Ensembl:ENST00000455915 GeneID:5905 KEGG:hsa:5905 UCSC:uc003azs.3
CTD:5905 GeneCards:GC22M041641 HGNC:HGNC:9854 HPA:CAB004293
MIM:602362 neXtProt:NX_P46060 PharmGKB:PA34216 HOGENOM:HOG000195026
HOVERGEN:HBG017720 InParanoid:P46060 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 EvolutionaryTrace:P46060 GenomeRNAi:5905
NextBio:22968 ArrayExpress:P46060 Bgee:P46060 CleanEx:HS_RANGAP1
Genevestigator:P46060 GermOnline:ENSG00000100401 Gene3D:1.25.40.200
SUPFAM:SSF69099 Uniprot:P46060
Length = 587
Score = 808 (289.5 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 169/356 (47%), Positives = 230/356 (64%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ EDAK ++ I + L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR++TEIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV+G LL+SS CF I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PLALKVF+AGRNRLEN+GA LA F+ + TLE V MPQNGI H GITAL+ AF N L
Sbjct: 179 PLALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITALAQAFAVNPLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA + L+++
Sbjct: 239 RVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +AM +K +L++++++ N GEEG E+++++++ F MA L
Sbjct: 299 NLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 354
Score = 141 (54.7 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEE 336
Query: 663 GGLDLVKAMK--NKTK-LKQINVSENQFGEEGVEEMEK 697
G L + ++ N K L ++ E++ EE EE E+
Sbjct: 337 GCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEE 374
Score = 100 (40.3 bits), Expect = 5.0e-89, Sum P(2) = 5.0e-89
Identities = 40/139 (28%), Positives = 59/139 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
V+ FLA PS LGP + L + + S+PE ++ A +K
Sbjct: 434 VSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPE-----KVVSAFLKVSSVFKDEATVRM 488
Query: 840 XXXXXFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAV 899
+ L ++ FN S+S +T LLVH+GL+K EDK K NL G + A+
Sbjct: 489 AVQ---DAVDALMQKAFN--SSSFNSNTFLTRLLVHMGLLKSEDK-VKAIANLYGPLMAL 542
Query: 900 RLLSEAKLLPSLTESQLLA 918
+ + P LLA
Sbjct: 543 NHMVQQDYFPKALAPLLLA 561
Score = 45 (20.9 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 279 EKKTLVIKVPISGFLNGEVETFVPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGP 338
EKK+ + + S G + T +PP L+ L EG I +V + DN GP
Sbjct: 74 EKKSELKRCHWSDMFTGRLRTEIPP-ALISLG------EGLITAGAQLVELDLSDNAFGP 126
>UNIPROTKB|F1MFD5 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0005098 "Ran GTPase
activator activity" evidence=IEA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471 GO:GO:0007165
GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:DAAA02014729
EMBL:DAAA02014730 IPI:IPI00876799 UniGene:Bt.11079
Ensembl:ENSBTAT00000012125 ArrayExpress:F1MFD5 Uniprot:F1MFD5
Length = 585
Score = 802 (287.4 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 167/356 (46%), Positives = 231/356 (64%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ +DAK ++ I + L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTADDAKDVIKEIEDFDGLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKPELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+SS CF I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PLALKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 179 PLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA + L+++
Sbjct: 239 RVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLVRSKGAIAIADAIHGGLPKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI + L + +A+ +KT+L++++++ N GEEG E+++++++ F MAA L
Sbjct: 299 NLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEEGCEQLQEVLEGFNMAAVL 354
Score = 126 (49.4 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 39/156 (25%), Positives = 73/156 (46%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGAI + A+ LP L LNL +K A S+A+ + D T LE ++L N + +
Sbjct: 277 RSKGAIAIADAIHGGLPKLKELNLSFGEIKREAALSVAEAVADKTELEKLDLNGNMLGEE 336
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 697
G L + ++ + ++S+++ GE+ +E E+
Sbjct: 337 GCEQLQEVLEGFNMAAVLASLSDDE-GEDDEDEDEE 371
Score = 93 (37.8 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
V+ FLA PS LGP + L + + S+PE ++ A +K
Sbjct: 432 VSTFLAFPSPEKLLRLGPKSSMLIAQQTDTSDPE-----KVVSAFLKVSSVFKDEASVRT 486
Query: 840 XXXXXFECTKVLYRELFNWAS-NSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTA 898
+ L ++ F+ ++ NS+ T LL+H+GL+K EDK K NL G + A
Sbjct: 487 AVQ---DAVDALMKKAFSSSAFNSNAFLT---RLLIHMGLLKSEDK-IKAVANLYGPLMA 539
Query: 899 VRLLSEAKLLPSLTESQLLACM 920
+ + + P LLA M
Sbjct: 540 LTHVVQQDYFPKALAPLLLAFM 561
>UNIPROTKB|F1NIE8 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0046826 "negative
regulation of protein export from nucleus" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:AADN02006075
EMBL:AADN02006074 IPI:IPI00583992 PRIDE:F1NIE8
Ensembl:ENSGALT00000019518 ArrayExpress:F1NIE8 Uniprot:F1NIE8
Length = 579
Score = 793 (284.2 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 165/356 (46%), Positives = 229/356 (64%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF GQ LKL+ EDA+ ++ I E L +L LEG
Sbjct: 3 SEDIAKLAESLAKTKVGGGQ----LSFKGQSLKLNTAEDAEEVIKQIEEFDGLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AAK IA AL K KR W DMFTGR+++EIP AL LG+ L AGA+LVELD
Sbjct: 59 NTVGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGDALITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+S C+ I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACYTLQELKLNNCGMGIGGGKILAAALKECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PLALK+F+AGRNRLEN+GA LA F + TLE V MPQNGI H GITAL+ AF N L
Sbjct: 179 PLALKIFMAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGITALAQAFAINSLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDV 652
+ +NLNDNT T KGA+ + + L L + ++N GDCL++S GA +IA L + L+++
Sbjct: 239 KVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLVRSKGALAIADALKEGLHKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A+++K +L++++++ N GEEG E+++++++ F MA L
Sbjct: 299 NLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEEGCEQLQEILEGFNMATVL 354
Score = 137 (53.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L+ + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGITALAQAFAINSLLKVINLNDNTFTEKGAVAMAETLKALRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + AL + L L LNL C +K A S+A+ + D LE ++L N + +
Sbjct: 277 RSKGALAIADALKEGLHKLKELNLSFCEIKRDAALSVAEAIEDKVELEKLDLNGNSLGEE 336
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 697
G L + ++ + + GEE EE E+
Sbjct: 337 GCEQLQEILEGFNMATVLGSLSDDEGEEEDEEEEE 371
Score = 90 (36.7 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 34/130 (26%), Positives = 57/130 (43%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLAIMKXXXXXXXXXXXXXX 840
V FLA PS LGP C+ L + ++ D +E ++ A+++
Sbjct: 426 VATFLAFPSPEKLLRLGPKCSVLIAQQ--TDTSD--VEKVVTALLRISSVFKDEAQVKTA 481
Query: 841 XXXXFECTKVLYRELFNWAS-NSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAV 899
E L ++ F+ A+ NSD T LL+H+GL+K E+K K +L G + +
Sbjct: 482 VH---ETADALMKKAFSSATFNSDAFIT---RLLIHMGLLKSEEK-IKAVPSLYGILMTL 534
Query: 900 RLLSEAKLLP 909
+ + P
Sbjct: 535 NHMVQQDYFP 544
>UNIPROTKB|F1PVY6 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:AAEX03007299 Ensembl:ENSCAFT00000001695 Uniprot:F1PVY6
Length = 628
Score = 785 (281.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 165/356 (46%), Positives = 226/356 (63%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ EDAK ++ I + L +L LEG
Sbjct: 44 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEG 99
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 100 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELD 159
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+SS CF I G K+L+ AL +C+ S +G
Sbjct: 160 LSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 219
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 220 PLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 279
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KGA+ + + L L ++N GDCL++S GA +IA+ + L+++
Sbjct: 280 RVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKEL 339
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A+ +K +L++++++ N GEEG E++++++ F MA L
Sbjct: 340 NLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVL 395
Score = 132 (51.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A++ + + +N D +
Sbjct: 258 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLV 317
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + +A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 318 RSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEE 377
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 697
G L + + + + ++S+++ GE+ EE E+
Sbjct: 378 GCEQLQEVLDGFNMARVLASLSDDE-GEDDEEEEEE 412
Score = 92 (37.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 40/140 (28%), Positives = 60/140 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
V+ FLA PS LGP + L + + S+PE ++ A +K
Sbjct: 475 VSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPE-----KVVSAFLKVSSVFKDEAPVRT 529
Query: 840 XXXXXFECTKVLYRELFNWAS-NSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTA 898
+ L ++ F+ +S NS+ T LLVH+GL+K EDK K NL G + A
Sbjct: 530 AVQ---DAVDALMKKAFSSSSFNSNAFLT---RLLVHMGLLKSEDK-IKAIANLYGPLMA 582
Query: 899 VRLLSEAKLLPSLTESQLLA 918
+ + + P LLA
Sbjct: 583 LNHMVQQDYFPKALAPLLLA 602
>UNIPROTKB|J9NZ28 [details] [associations]
symbol:RANGAP1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 GO:GO:0032853 GeneTree:ENSGT00440000039203
GO:GO:0005098 PANTHER:PTHR24113 OMA:SFNSNAF Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AAEX03007299 Ensembl:ENSCAFT00000043188
Uniprot:J9NZ28
Length = 641
Score = 785 (281.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 165/356 (46%), Positives = 226/356 (63%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ EDAK ++ I + L +L LEG
Sbjct: 57 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEG 112
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 113 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELD 172
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+SS CF I G K+L+ AL +C+ S +G
Sbjct: 173 LSDNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 232
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 233 PLGLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 292
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KGA+ + + L L ++N GDCL++S GA +IA+ + L+++
Sbjct: 293 RVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKEL 352
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A+ +K +L++++++ N GEEG E++++++ F MA L
Sbjct: 353 NLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVL 408
Score = 132 (51.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A++ + + +N D +
Sbjct: 271 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKTLKTLRQAEVINFGDCLV 330
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + +A+ LP L LNL C +K A ++A+ + D LE ++L N + +
Sbjct: 331 RSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVADKAELEKLDLNGNMLGEE 390
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEMEK 697
G L + + + + ++S+++ GE+ EE E+
Sbjct: 391 GCEQLQEVLDGFNMARVLASLSDDE-GEDDEEEEEE 425
Score = 92 (37.4 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 40/140 (28%), Positives = 60/140 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
V+ FLA PS LGP + L + + S+PE ++ A +K
Sbjct: 488 VSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPE-----KVVSAFLKVSSVFKDEAPVRT 542
Query: 840 XXXXXFECTKVLYRELFNWAS-NSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTA 898
+ L ++ F+ +S NS+ T LLVH+GL+K EDK K NL G + A
Sbjct: 543 AVQ---DAVDALMKKAFSSSSFNSNAFLT---RLLVHMGLLKSEDK-IKAIANLYGPLMA 595
Query: 899 VRLLSEAKLLPSLTESQLLA 918
+ + + P LLA
Sbjct: 596 LNHMVQQDYFPKALAPLLLA 615
>MGI|MGI:103071 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005098
"Ran GTPase activator activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0046826 "negative regulation of
protein export from nucleus" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR009109
InterPro:IPR027038 Pfam:PF07834 MGI:MGI:103071 GO:GO:0048471
GO:GO:0007165 GO:GO:0005819 GO:GO:0031965 GO:GO:0046826
GO:GO:0000777 GO:GO:0032853 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
CTD:5905 HOVERGEN:HBG017720 OMA:SFNSNAF OrthoDB:EOG4K0QN7
ChiTaRS:RANGAP1 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:U08110
EMBL:U20857 EMBL:AK146670 EMBL:AK159009 EMBL:AK159525 EMBL:BC066213
EMBL:BC071200 IPI:IPI00467338 PIR:A36983 PIR:T52070
RefSeq:NP_001139646.1 RefSeq:NP_035371.4 UniGene:Mm.270975 PDB:1KPS
PDBsum:1KPS ProteinModelPortal:P46061 SMR:P46061 DIP:DIP-17024N
IntAct:P46061 STRING:P46061 PhosphoSite:P46061 PaxDb:P46061
PRIDE:P46061 Ensembl:ENSMUST00000052374 Ensembl:ENSMUST00000170134
Ensembl:ENSMUST00000171115 GeneID:19387 KEGG:mmu:19387
InParanoid:Q6NZB5 EvolutionaryTrace:P46061 NextBio:296501
Bgee:P46061 CleanEx:MM_RANGAP1 Genevestigator:P46061
GermOnline:ENSMUSG00000022391 Uniprot:P46061
Length = 589
Score = 793 (284.2 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 168/356 (47%), Positives = 227/356 (63%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+GLKL+ EDAK ++ I E L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKGLKLNTAEDAKDVIKEIEEFDGLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+S CF I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PLALKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 179 PLALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA + L+++
Sbjct: 239 RVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A+ +K +L++++++ N GEEG E+++++M SF MA L
Sbjct: 299 NLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVMDSFNMAKVL 354
Score = 134 (52.2 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + A+ LP L LNL C +K A +A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEE 336
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 696
G L + M + K + ++S+++ GE+ EE E
Sbjct: 337 GCEQLQEVMDSFNMAKVLASLSDDE-GEDEDEEEE 370
Score = 81 (33.6 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
Identities = 35/140 (25%), Positives = 60/140 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
++ FL+ PS LGP + L + + + S+PE ++ A +K
Sbjct: 436 LSTFLSFPSPEKLLRLGPKVSVLIVQQTDTSDPE-----KVVSAFLKVASVFRDDASVKT 490
Query: 840 XXXXXFECTKVLYRELFNWAS-NSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTA 898
+ L ++ F+ +S NS+ T LL+H+GL+K EDK K +L+G +
Sbjct: 491 AVLDAIDA---LMKKAFSCSSFNSN---TFLTRLLIHMGLLKSEDK-IKAIPSLHGPLMV 543
Query: 899 VRLLSEAKLLPSLTESQLLA 918
+ + P LLA
Sbjct: 544 LNHVVRQDYFPKALAPLLLA 563
Score = 41 (19.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 279 EKKTLVIKVPISGFLNGEVETFVPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGP 338
EKK+ + + S G + + +PP L+ L EG I +V + DN GP
Sbjct: 74 EKKSELKRCHWSDMFTGRLRSEIPP-ALISLG------EGLITAGAQLVELDLSDNAFGP 126
>UNIPROTKB|F1MAA5 [details] [associations]
symbol:Rangap1 "Protein Rangap1" species:10116 "Rattus
norvegicus" [GO:0005098 "Ran GTPase activator activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834 GO:GO:0048471
GO:GO:0007165 GO:GO:0000776 GO:GO:0046826 GO:GO:0032853
GeneTree:ENSGT00440000039203 GO:GO:0005098 PANTHER:PTHR24113
OMA:SFNSNAF Gene3D:1.25.40.200 SUPFAM:SSF69099 IPI:IPI00471774
PRIDE:F1MAA5 Ensembl:ENSRNOT00000052098 Uniprot:F1MAA5
Length = 586
Score = 775 (277.9 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 165/356 (46%), Positives = 224/356 (62%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+GLKL+ EDAK ++ I E L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKGLKLNTAEDAKDVIKEIEEFDGLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKSKLKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+S CF I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 179 PLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA + L+++
Sbjct: 239 RVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A + +L++++++ N GEEG E++++++ SF MA L
Sbjct: 299 NLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354
Score = 124 (48.7 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + A+ LP L LNL C +K A +A+ D+ LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAGADHAELEKLDLNGNALGEE 336
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 696
G L + + + K + ++S+++ GE+ E+ E
Sbjct: 337 GCEQLQEVLDSFNMAKVLASLSDDE-GEDEDEDEE 370
Score = 85 (35.0 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
++ FL+ PS LGP + L + + + S+PE ++ A +K
Sbjct: 433 LSTFLSFPSPEKLLRLGPKVSVLIVQQTDTSDPE-----KVVSAFLKVASVFRDEASVKT 487
Query: 840 XXXXXFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAV 899
+ L ++ F+ S+S +T LL+H+GL+K EDK K +L+G + +
Sbjct: 488 AVLDAIDA---LMKKAFS--SSSFNSNTFLTRLLIHMGLLKSEDK-IKAIPSLHGPLMVL 541
Query: 900 RLLSEAKLLPSLTESQLLA 918
+ + P LLA
Sbjct: 542 NHVVQQDYFPKTLAPLLLA 560
Score = 42 (19.8 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 279 EKKTLVIKVPISGFLNGEVETFVPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGP 338
EKK+ + + S G + + +PP L+ L EG I +V + DN GP
Sbjct: 74 EKKSKLKRCHWSDMFTGRLRSEIPP-ALISLG------EGLITAGAQLVELDLSDNAFGP 126
>UNIPROTKB|O13066 [details] [associations]
symbol:rangap1 "Ran GTPase-activating protein 1"
species:8355 "Xenopus laevis" [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0005737 GO:GO:0007165 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HOVERGEN:HBG017720 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:U88155 UniGene:Xl.57165
ProteinModelPortal:O13066 SMR:O13066 PRIDE:O13066
Xenbase:XB-GENE-6464329 Uniprot:O13066
Length = 580
Score = 786 (281.7 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 162/355 (45%), Positives = 232/355 (65%)
Query: 355 DDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGN 414
+D++ + L +V G+ LSF G+ LKL+ +DA+ ++ I E + L +L LEGN
Sbjct: 4 EDIAQLADCLAKANVGDGE----LSFKGKTLKLNTAQDAEEVIREIEEYEGLQALRLEGN 59
Query: 415 TLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDL 474
T+GV AAKAIA+ L + KR W DMFTGR++ EIP ALR LG+ L AGA+L ELDL
Sbjct: 60 TVGVEAAKAIAEVLQRKPDLKRCHWSDMFTGRLRPEIPTALRSLGDALITAGAQLTELDL 119
Query: 475 SDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSP 534
SDNAFGP GV G LL+S CF I G K+L+ AL +C++ S G P
Sbjct: 120 SDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGKILAAALTECHKKSSAHGKP 179
Query: 535 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 594
LALKVFIAGRNRLEN+GA L+ F+ + TLE V MPQNGI H GITAL+++F+ N L+
Sbjct: 180 LALKVFIAGRNRLENDGATALSEAFRLIGTLEEVHMPQNGINHAGITALAESFKANSLLK 239
Query: 595 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVN 653
+NLNDNT T KG + + +AL L + ++N GDCL++S GA +IA L + L+D+N
Sbjct: 240 VINLNDNTFTEKGGVAMAEALKTLRQVEVINFGDCLVRSKGAQAIASALKEGLHKLKDLN 299
Query: 654 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
L+ EI + L +++++K+ L++++++ N GEEG E+++++++S MA L
Sbjct: 300 LSYCEIKADAAVSLAESVEDKSDLEKLDLNGNCLGEEGCEQVQEILESINMANIL 354
Score = 71 (30.1 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 29/135 (21%), Positives = 53/135 (39%)
Query: 784 FLAAPSVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLAIMKXXXXXXXXXXXXXXXXX 843
FL+ PS +GP + + ++N ++ +++ +
Sbjct: 430 FLSFPSPEKLVRMGPRRSAMIAQQVNVADTEKVVQAFIQV-------SSVYREDGEIKAA 482
Query: 844 XFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAVRLLS 903
E L +E F + + + +LLV +GL+K EDK I + LNG + + +
Sbjct: 483 VEETIDGLMKEAFE--NRGFQANVFITSLLVQMGLLKSEDKMKTIPH-LNGPLLTLNHMV 539
Query: 904 EAKLLPSLTESQLLA 918
+ P S LLA
Sbjct: 540 QQNYFPKSLASTLLA 554
>ZFIN|ZDB-GENE-040426-1921 [details] [associations]
symbol:rangap1b "Ran GTPase activating protein 1b"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-040426-1921 GO:GO:0007165 GO:GO:0032853 HSSP:P41391
GO:GO:0005098 PANTHER:PTHR24113 HOGENOM:HOG000195026
HOVERGEN:HBG017720 Gene3D:1.25.40.200 SUPFAM:SSF69099 EMBL:BC054654
IPI:IPI00505852 RefSeq:NP_998154.1 UniGene:Dr.77291
ProteinModelPortal:Q7SYN0 STRING:Q7SYN0 PRIDE:Q7SYN0 GeneID:568424
KEGG:dre:568424 CTD:568424 NextBio:20889164 ArrayExpress:Q7SYN0
Bgee:Q7SYN0 Uniprot:Q7SYN0
Length = 577
Score = 757 (271.5 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 161/349 (46%), Positives = 224/349 (64%)
Query: 357 VSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTL 416
+ DI + E+++ ++ +LS+ G+GLKLDN E K IV+ I + L SL LEGNTL
Sbjct: 3 LGDIAQITEALA-KTHVGEVELSYKGRGLKLDNAESVKEIVEDIERCQGLQSLRLEGNTL 61
Query: 417 GVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSD 476
GV AA AIA +L ++ W DMFTGR+++EIP AL+ LGN L +GARL +LDLSD
Sbjct: 62 GVEAADAIAKSLEAKRELEQCHWSDMFTGRLRSEIPPALKSLGNALMTSGARLTQLDLSD 121
Query: 477 NAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLA 536
NAFGP GV+G+ +LL+SS C+ G +L+ AL +C++ S SPL
Sbjct: 122 NAFGPDGVKGIENLLKSSACYTLQELRLNNCGMGSGGGVVLASALTECHKQSSAAASPLR 181
Query: 537 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 596
LKVFIAGRNRLEN+GA LA FK L +LE V MPQNGI H GITAL+ A + N NL+ L
Sbjct: 182 LKVFIAGRNRLENDGATALAKAFKLLGSLEEVHMPQNGINHPGITALAAALKHNPNLQVL 241
Query: 597 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDVNLT 655
NLNDNT T KG+ + +A+ L L +N GDCL++S GA +IA L + L ++NL+
Sbjct: 242 NLNDNTFTTKGSKAMAEAIRNLQCLKAINFGDCLVRSEGAIAIAGALREGLHLLRELNLS 301
Query: 656 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGM 704
EI + + KA++ K L++++++ N FGE+G E +++ M+ M
Sbjct: 302 FGEICEAAAMVVAKAVQGKADLEKLDLNGNCFGEDGCEALKEAMEKMNM 350
Score = 97 (39.2 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 44/179 (24%), Positives = 85/179 (47%)
Query: 546 RLENEGAKMLAAVFKKLKT----LERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLN 599
RL +E L ++ L T L ++++ N G+ + + + + L+ L LN
Sbjct: 91 RLRSEIPPALKSLGNALMTSGARLTQLDLSDNAFGPDGVKGIENLLKSSACYTLQELRLN 150
Query: 600 DNTITYKGAIPLGQALS---KLPSLAI--LNL-----GDCLLKSAGASSIAKYLTDNTTL 649
+ + G + L AL+ K S A L L G L++ GA+++AK +L
Sbjct: 151 NCGMGSGGGVVLASALTECHKQSSAAASPLRLKVFIAGRNRLENDGATALAKAFKLLGSL 210
Query: 650 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
E+V++ N I+ G L A+K+ L+ +N+++N F +G + M + +++ A+
Sbjct: 211 EEVHMPQNGINHPGITALAAALKHNPNLQVLNLNDNTFTTKGSKAMAEAIRNLQCLKAI 269
Score = 86 (35.3 bits), Expect = 3.6e-82, Sum P(2) = 3.6e-82
Identities = 32/111 (28%), Positives = 50/111 (45%)
Query: 779 HS--VTDFLAAPSVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLAIMKXXXXXXXXXX 836
HS + FL +PS SLG QL +++ ++ E + L I
Sbjct: 415 HSSELMSFLVSPSAEKLISLGTKRVQLIEQQVDVTDANKVSE-VFLKI------SSVYKD 467
Query: 837 XXXXXXXXFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFK 887
FE T L R+ F+ + +S S +++ L+V+LGL+K EDK K
Sbjct: 468 EPEVKQAVFETTDALLRKAFSNSPHSQSYSFISS-LMVNLGLLKSEDKKVK 517
>RGD|1310380 [details] [associations]
symbol:Rangap1 "RAN GTPase activating protein 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR027038 RGD:1310380 eggNOG:COG5238 PANTHER:PTHR24113
HOGENOM:HOG000195026 HOVERGEN:HBG017720 OrthoDB:EOG4K0QN7
IPI:IPI00471774 EMBL:BC082056 UniGene:Rn.107099
ProteinModelPortal:Q66H32 STRING:Q66H32 PRIDE:Q66H32
InParanoid:Q66H32 NextBio:681949 ArrayExpress:Q66H32
Genevestigator:Q66H32 Uniprot:Q66H32
Length = 431
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 166/356 (46%), Positives = 226/356 (63%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+GLKL+ EDAK ++ I E L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKGLKLNTAEDAKDVIKEIEEFDGLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR+++EIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKSKLKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV G LL+S CF I G K+L+ AL +C+ S +G
Sbjct: 119 LSDNAFGPDGVRGFEALLKSPACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGK 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
PL LKVF+AGRNRLEN+GA LA F + TLE V MPQNGI H G+TAL+ AF N L
Sbjct: 179 PLTLKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R +NLNDNT T KG + + + L L + ++N GDCL++S GA +IA + L+++
Sbjct: 239 RVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI L + +A+ +K +L++++++ N GEEG E++++++ SF MA L
Sbjct: 299 NLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEEGCEQLQEVLDSFNMAKVL 354
Score = 128 (50.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 544 RNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
+N + + G LA F L + + N G A+++ + + + +N D +
Sbjct: 217 QNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGGVAMAETLKTLRQVEVINFGDCLV 276
Query: 604 TYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
KGA+ + A+ LP L LNL C +K A +A+ + D LE ++L N + +
Sbjct: 277 RSKGAVAIADAVRGGLPKLKELNLSFCEIKRDAALVVAEAVADKAELEKLDLNGNALGEE 336
Query: 663 GGLDLVKAMKNKTKLKQI-NVSENQFGEEGVEEME 696
G L + + + K + ++S+++ GE+ E+ E
Sbjct: 337 GCEQLQEVLDSFNMAKVLASLSDDE-GEDEDEDEE 370
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 279 EKKTLVIKVPISGFLNGEVETFVPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGP 338
EKK+ + + S G + + +PP L+ L EG I +V + DN GP
Sbjct: 74 EKKSKLKRCHWSDMFTGRLRSEIPP-ALISLG------EGLITAGAQLVELDLSDNAFGP 126
>ZFIN|ZDB-GENE-060929-492 [details] [associations]
symbol:rangap1a "RAN GTPase activating protein 1a"
species:7955 "Danio rerio" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
ZFIN:ZDB-GENE-060929-492 GO:GO:0007165 GO:GO:0032853 eggNOG:COG5238
KO:K14319 GeneTree:ENSGT00440000039203 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 HOVERGEN:HBG017720
OMA:SFNSNAF OrthoDB:EOG4K0QN7 Gene3D:1.25.40.200 SUPFAM:SSF69099
EMBL:CR774195 EMBL:CU633617 EMBL:CU655966 EMBL:BC124540
IPI:IPI00803875 RefSeq:NP_001070084.1 UniGene:Dr.82553 SMR:Q08BV5
STRING:Q08BV5 Ensembl:ENSDART00000088610 GeneID:767677
KEGG:dre:767677 CTD:767677 NextBio:20918068 Uniprot:Q08BV5
Length = 570
Score = 754 (270.5 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 157/356 (44%), Positives = 231/356 (64%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
+DDV+++ L V G+ LS+ G+GLKLDN + + +V I E + L +L LEG
Sbjct: 3 SDDVANLADSLAKTQVNEGE----LSYKGKGLKLDNAQSVEQMVKEIGEFEGLRALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL + W DMFTGR++ EIP AL LG+ L AGARL LD
Sbjct: 59 NTIGVEAAQTIAKALENKSDLQCCHWSDMFTGRLRAEIPPALVSLGDALILAGARLKVLD 118
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNAFGP GV+G+ LL+S+ C I G K+L+ AL +C++ S G+
Sbjct: 119 LSDNAFGPDGVKGIEKLLKSAACHTLQELRLNNCGMGIGGGKILAAALSECHQQSSALGA 178
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
P LKVFIAGRNRLEN+GA LA F+ + +LE V MPQNGI + G+TAL+ A + N L
Sbjct: 179 PFKLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHMPQNGINYPGVTALATAMQHNPQL 238
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDV 652
R LNLNDNT T KGA+ + QAL L ++ ++N GDCL++S GAS++A+ + + L+++
Sbjct: 239 RVLNLNDNTFTKKGAMAMAQALKHLRNVQVINFGDCLVRSEGASALAETVREGLPILKEL 298
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
NL+ EI + L++ +++++K + ++++++ N GE+G + +++LM+S MA L
Sbjct: 299 NLSFGEIMEEAALEVAQSVQHKDQFEKLDLNGNSLGEDGCKSLKQLMESINMADKL 354
Score = 45 (20.9 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 870 NALLVHLGLIKCEDK 884
++LLV +GL+K EDK
Sbjct: 493 SSLLVMVGLLKSEDK 507
>FB|FBgn0003346 [details] [associations]
symbol:RanGAP "Ran GTPase activating protein" species:7227
"Drosophila melanogaster" [GO:0005098 "Ran GTPase activator
activity" evidence=IDA;NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006913 "nucleocytoplasmic transport" evidence=NAS] [GO:0045132
"meiotic chromosome segregation" evidence=TAS] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR027038 GO:GO:0005737
EMBL:AE014134 GO:GO:0022008 GO:GO:0006913 GO:GO:0045132
eggNOG:COG5238 KO:K14319 EMBL:AF143860 EMBL:AY061219
RefSeq:NP_476712.1 UniGene:Dm.3220 ProteinModelPortal:Q9VIW3
SMR:Q9VIW3 DIP:DIP-23850N IntAct:Q9VIW3 MINT:MINT-885779
STRING:Q9VIW3 PaxDb:Q9VIW3 PRIDE:Q9VIW3 EnsemblMetazoa:FBtr0081234
GeneID:35223 KEGG:dme:Dmel_CG9999 CTD:35223 FlyBase:FBgn0003346
GeneTree:ENSGT00440000039203 InParanoid:Q9VIW3 OMA:AEETAYV
OrthoDB:EOG4V15GM PhylomeDB:Q9VIW3 ChiTaRS:SD GenomeRNAi:35223
NextBio:792463 Bgee:Q9VIW3 GermOnline:CG9999 GO:GO:0005098
PANTHER:PTHR24113 Uniprot:Q9VIW3
Length = 596
Score = 723 (259.6 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 156/344 (45%), Positives = 219/344 (63%)
Query: 366 SISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIA 425
S++ + GQ+ +SF + L + D + +VDA+N+ + LNL+GNTLGV AAKAI
Sbjct: 8 SMAAQLGQEQG-ISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNTLGVEAAKAIG 66
Query: 426 DALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVE 485
+ L +H F++ALWK+MFTGR+ +EIP+AL++LG L AGA+L LDLSDNA GP G+
Sbjct: 67 EGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLSDNALGPNGMR 126
Query: 486 GLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRN 545
GL +LLRS C++ G +LS+AL D + ++ K G PL L+VFI RN
Sbjct: 127 GLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPLQLRVFIGSRN 186
Query: 546 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 605
RLE+ GA +A F+ LKT E + + QN IY G+ AL+++F+ N +LR LN+NDNT+
Sbjct: 187 RLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKS 246
Query: 606 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT-DNTTLEDVNLTCNEISVQGG 664
+GA + +AL LP L ++ GDCL+K+ GA + L N LE ++L NEI+ GG
Sbjct: 247 EGAEKIAEALPFLPLLREMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGG 306
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
L LV AM NK KL+ +N+ N FGEEG E++ M AAAL
Sbjct: 307 LVLVNAMGNKPKLRILNLDGNSFGEEGSEKIISEMSKLPTAAAL 350
Score = 103 (41.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 39/162 (24%), Positives = 68/162 (41%)
Query: 537 LKVF---IAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
LK F + +N + EG + LA FK L + M N + G +++A L
Sbjct: 203 LKTFEEIVLEQNSIYIEGVEALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLL 262
Query: 594 RHLNLNDNTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 652
R ++ D I GA G+AL + L +++LG + S G + + + L +
Sbjct: 263 REMSFGDCLIKTNGAYHFGEALERGNERLEVIDLGFNEINSDGGLVLVNAMGNKPKLRIL 322
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 694
NL N +G ++ M + ++Q EE +E+
Sbjct: 323 NLDGNSFGEEGSEKIISEMSKLPTAAALQPFQHQ-EEEDLED 363
Score = 69 (29.3 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 851 LYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAVR 900
LY+ F++A + + + V N +L+ L L+ C++ F +Y++ C A+R
Sbjct: 522 LYQATFDYAIKTKQETRVLNYVLMQLRLLPCKEV-FHSDYDVKNCRFALR 570
>WB|WBGene00004303 [details] [associations]
symbol:ran-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
InterPro:IPR027038 GO:GO:0005634 GO:GO:0009792 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0005096 GO:GO:0043547
GO:GO:0000003 EMBL:FO080706 eggNOG:COG5238 KO:K14319
GeneTree:ENSGT00440000039203 PANTHER:PTHR24113 PIR:S44770
RefSeq:NP_741232.1 RefSeq:NP_741233.2 ProteinModelPortal:P34342
SMR:P34342 IntAct:P34342 STRING:P34342 PaxDb:P34342 PRIDE:P34342
EnsemblMetazoa:C29E4.3a GeneID:176115 KEGG:cel:CELE_C29E4.3
UCSC:C29E4.3a CTD:176115 WormBase:C29E4.3a WormBase:C29E4.3b
HOGENOM:HOG000019607 InParanoid:P34342 OMA:NNIVAQC NextBio:891178
Uniprot:P34342
Length = 960
Score = 594 (214.2 bits), Expect = 3.9e-57, P = 3.9e-57
Identities = 140/346 (40%), Positives = 193/346 (55%)
Query: 357 VSDILKK-LESISVESGQDSTK----LSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNL 411
++D++ K + +E Q ++ +SF + LKLD E A+ +V I + +L L
Sbjct: 424 MNDLMNKGFGCMKIEDNQQNSNGNGMVSFLDKSLKLDTAESAEPVVKVIAAASSMKALEL 483
Query: 412 EGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVE 471
GNTLG+ A IA AL H +R LW D+FTGR+K EIP L LG + AG ++ E
Sbjct: 484 RGNTLGIAAGNVIAKALESHPELERCLWSDLFTGRLKNEIPPILEALGKAMMTAGCKIKE 543
Query: 472 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 531
LDLSDNAFGPIG + L DLL S F+ I G K ++K+L +C S
Sbjct: 544 LDLSDNAFGPIGADALKDLLESPSSFSLEVLKLNNNGLGIGG-KQIAKSLTECLRKSIAV 602
Query: 532 GSP--LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 589
G L LK FIAGRNRLEN GA LAA FK L+T+E ++ QNGI+ GI AL A +
Sbjct: 603 GGENRLRLKTFIAGRNRLENPGAHALAATFKALETVEWFDVRQNGIHEEGIRALVAALKH 662
Query: 590 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NT 647
N+NLR+L L DNT+ KGA L + L P L +LNL DCL++ AG + I +L +
Sbjct: 663 NRNLRYLWLEDNTVLPKGAKALAKTLESWPKLEVLNLSDCLIRDAGCNYIIDHLNPQHHR 722
Query: 648 TLEDVNLTCNEISVQGGLDLVKAMKN---KTKLKQINVSENQFGEE 690
L++V L NE++ L++ T +++ N FG+E
Sbjct: 723 HLKNVYLCGNELTPPVAKLLIQKWSKFDGLTPKPVLHIHTNSFGDE 768
Score = 530 (191.6 bits), Expect = 3.0e-48, P = 3.0e-48
Identities = 127/317 (40%), Positives = 178/317 (56%)
Query: 378 LSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRA 437
LSF G+ LKLD +E+ ++D I + L L+ GNTL V A K IA++L K
Sbjct: 44 LSFFGKQLKLDTEEEISKVIDQIRKHLNLEVLDFRGNTLSVLAGKLIAESLKTRRELKEC 103
Query: 438 LWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCF 497
+W DMFTGR+K EIP L LG L +G RL LDLSDNAFG L + L+S +
Sbjct: 104 IWSDMFTGRLKDEIPLVLDALGEALTASGCRLTTLDLSDNAFGAGLSTSLYNFLQSPALY 163
Query: 498 AXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 557
+ + G K + KAL ++SKK G+PL LK F+ GRNRLE E L+
Sbjct: 164 SLENLILNNNGLGLAG-KTVGKALCSLIDASKKAGTPLKLKKFVCGRNRLEVESTIALSD 222
Query: 558 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 617
F KL TLE + +PQNGI GI AL++AF NK LR +++NDN +GAI + + LS
Sbjct: 223 AFIKLGTLEEIRLPQNGIRDDGIIALAEAFRMNKKLRIIDINDNFCCPEGAIQISEVLSD 282
Query: 618 LPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKAMKNKT 675
L + +L+LGDC+ G +I L + L+ V L+ N I+ +D + A N
Sbjct: 283 LQFIEVLDLGDCVCDDPGVLAIIAELDKINRDCLKKVVLSGNNIT-SDVIDEIGACFNSP 341
Query: 676 KL--KQINVSENQFGEE 690
K+ ++++S N FG++
Sbjct: 342 KMCHVKVDISVNMFGKD 358
>CGD|CAL0000022 [details] [associations]
symbol:RNA1 species:5476 "Candida albicans" [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016072 "rRNA metabolic process" evidence=IEA]
[GO:0000054 "ribosomal subunit export from nucleus" evidence=IEA]
[GO:0006399 "tRNA metabolic process" evidence=IEA] [GO:0006407
"rRNA export from nucleus" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0006404 "RNA import into nucleus" evidence=IEA]
[GO:0005098 "Ran GTPase activator activity" evidence=IEA]
InterPro:IPR027038 CGD:CAL0000022 EMBL:AACQ01000013 KO:K14319
PANTHER:PTHR24113 HOGENOM:HOG000195026 RefSeq:XP_721726.1
ProteinModelPortal:Q5AJS1 STRING:Q5AJS1 GeneID:3636595
KEGG:cal:CaO19.1649 Uniprot:Q5AJS1
Length = 414
Score = 403 (146.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 112/342 (32%), Positives = 177/342 (51%)
Query: 364 LESISVESG-QDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAK 422
+ S+ VE G T S +G+ LK D++ D + + E + + ++ GNT+G+ A+K
Sbjct: 1 MASVEVELGVTPETTYSISGKQLKFDSESDIAPYIKELTEKENVKKVDFSGNTIGIEASK 60
Query: 423 AIADALSKHEH-FKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGP 481
A+++AL KH+ + D++TGR+ TEIP +L YL L + L ++LSDNAFG
Sbjct: 61 ALSEALLKHKDTIVEINFSDLYTGRLNTEIPQSLEYLLPALLKL-PNLKLINLSDNAFGL 119
Query: 482 IGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFI 541
++ + L + G ++ +L ++ K EG +LK FI
Sbjct: 120 QTIDPIEAYLAKAVSIEHLILSNNGMGP-FAGSRI-GGSLFKLAKAKKAEGKE-SLKTFI 176
Query: 542 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD-AFEENKNLRHLNLND 600
GRNRLEN L+ + K LE V + QNGI GI+ L + NK L+ L+L D
Sbjct: 177 CGRNRLENGSVNYLSVGLRNHKDLEVVRLYQNGIRPAGISKLVEQGLSNNKKLKVLDLQD 236
Query: 601 NTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL---TDNTTLEDVNLTCN 657
NTIT +GAI + ++LS P L LNL D LLK+ G+ + + + L + L N
Sbjct: 237 NTITTRGAIHIAESLSNWPLLVELNLNDSLLKNKGSLKLVEAFHAGDEKPQLITLKLQYN 296
Query: 658 EISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 698
E+ L A+ +K +LK + ++ N+F EE E ++K+
Sbjct: 297 ELETDSLRVLADAIASKLPQLKFLELNGNRF-EEDSEHIDKI 337
>UNIPROTKB|F8W7I9 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 Pfam:PF07834
GO:GO:0007165 EMBL:AL035681 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200
SUPFAM:SSF69099 EMBL:AL035659 IPI:IPI00879681
ProteinModelPortal:F8W7I9 SMR:F8W7I9 PRIDE:F8W7I9
Ensembl:ENST00000407260 UCSC:uc011aoz.2 ArrayExpress:F8W7I9
Bgee:F8W7I9 Uniprot:F8W7I9
Length = 532
Score = 351 (128.6 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 109/333 (32%), Positives = 157/333 (47%)
Query: 378 LSFAG-QGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKR 436
LSF+G + +K ++ I + L +L LEGNT+GV AA+ IA AL K KR
Sbjct: 12 LSFSGGDDSQTQLFVSSKDVIKEIEDFDSLEALRLEGNTVGVEAARVIAKALEKKSELKR 71
Query: 437 ALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCC 496
W DMFTGR++TEIP AL LG GL AGA+LVELDLSDNAFGP GV+G LL+SS C
Sbjct: 72 CHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSAC 131
Query: 497 FAXXXXXXXXXXXXITGCKLLS--KALHDCYESSKKEG-SPLA--------LKVFIAGRN 545
F I G K++ + +H G + LA L+V N
Sbjct: 132 FTLQELKLNNCGMGIGGGKVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDN 191
Query: 546 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTIT 604
+GA +A K L+ +E + + G A++DA L+ LNL+ I
Sbjct: 192 TFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIK 251
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
A+ + +A++ L L+L L G + + LE N+ S+
Sbjct: 252 RDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQE------VLEGFNMAKVLASLSDD 305
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 697
D + + + + ++ E + EE EE E+
Sbjct: 306 EDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEE 338
Score = 314 (115.6 bits), Expect = 6.2e-31, Sum P(2) = 6.2e-31
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 560 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 619
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 150 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 209
Query: 620 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 678
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 210 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 269
Query: 679 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
+++++ N GEEG E+++++++ F MA L
Sbjct: 270 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 299
Score = 100 (40.3 bits), Expect = 1.8e-35, Sum P(2) = 1.8e-35
Identities = 40/139 (28%), Positives = 59/139 (42%)
Query: 781 VTDFLAAPSVSLFNSLGPNCAQLFLDEIN-SEPEDRYLESMLLAIMKXXXXXXXXXXXXX 839
V+ FLA PS LGP + L + + S+PE ++ A +K
Sbjct: 379 VSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPE-----KVVSAFLKVSSVFKDEATVRM 433
Query: 840 XXXXXFECTKVLYRELFNWASNSDKLSTVTNALLVHLGLIKCEDKSFKINYNLNGCMTAV 899
+ L ++ FN S+S +T LLVH+GL+K EDK K NL G + A+
Sbjct: 434 AVQ---DAVDALMQKAFN--SSSFNSNTFLTRLLVHMGLLKSEDK-VKAIANLYGPLMAL 487
Query: 900 RLLSEAKLLPSLTESQLLA 918
+ + P LLA
Sbjct: 488 NHMVQQDYFPKALAPLLLA 506
>POMBASE|SPAC22E12.07 [details] [associations]
symbol:rna1 "Ran GAP Rna1" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IGI] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0032853 "positive regulation of Ran GTPase activity"
evidence=TAS] [GO:0046827 "positive regulation of protein export
from nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IGI] InterPro:IPR027038 PomBase:SPAC22E12.07 GO:GO:0005829
GO:GO:0048471 GO:GO:0046827 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0031965 GO:GO:0006913 GO:GO:0030702 GO:GO:0000070
GO:GO:0051383 eggNOG:COG5238 KO:K14319 GO:GO:0005098
PANTHER:PTHR24113 HOGENOM:HOG000195026 PDB:1K5D PDB:1K5G
PDBsum:1K5D PDBsum:1K5G EMBL:X69882 PIR:S37691 RefSeq:NP_594833.1
PDB:1YRG PDB:2CA6 PDBsum:1YRG PDBsum:2CA6 ProteinModelPortal:P41391
SMR:P41391 IntAct:P41391 STRING:P41391 PRIDE:P41391
EnsemblFungi:SPAC22E12.07.1 GeneID:2541863 KEGG:spo:SPAC22E12.07
OMA:GIQHAGI OrthoDB:EOG40S3QS EvolutionaryTrace:P41391
NextBio:20802950 Uniprot:P41391
Length = 386
Score = 379 (138.5 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 110/336 (32%), Positives = 170/336 (50%)
Query: 376 TKLSFAGQGLKLD--NKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEH 433
++ S G+ LKLD ED K + + E + + L GNT+G AA+ +++ ++ +
Sbjct: 2 SRFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD 61
Query: 434 FKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRS 493
+ A + D+FTGR+K EIP+ALR L L + +L + LSDNAFGP E L D L
Sbjct: 62 LEIAEFSDIFTGRVKDEIPEALRLLLQALLKC-PKLHTVRLSDNAFGPTAQEPLIDFLSK 120
Query: 494 SCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAK 553
G K+ ++AL + + K + +P L+ I GRNRLEN K
Sbjct: 121 HTPLEHLYLHNNGLGPQ-AGAKI-ARALQELAVNKKAKNAP-PLRSIICGRNRLENGSMK 177
Query: 554 MLAAVFKKLKTLERVEMPQNGIYHVGIT-ALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
A F+ + L V+M QNGI GI L + + L+ L+L DNT T+ G+ L
Sbjct: 178 EWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALA 237
Query: 613 QALSKLPSLAILNLGDCLLKSAGASSIAKYLT--DNTTLEDVNLTCNEISVQGGLDLVKA 670
AL P+L L L DCLL + GA+++ + +N L+ + L NEI + L
Sbjct: 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTV 297
Query: 671 MKNKTK-LKQINVSENQFGEEG--VEEMEKLMKSFG 703
+ K L + ++ N+F EE V+E+ ++ + G
Sbjct: 298 IDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRG 333
>ASPGD|ASPL0000071633 [details] [associations]
symbol:ranGAP species:162425 "Emericella nidulans"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0046827 "positive
regulation of protein export from nucleus" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0051383
"kinetochore organization" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR027038 EMBL:BN001303 EMBL:AACD01000084 eggNOG:COG5238
KO:K14319 PANTHER:PTHR24113 HOGENOM:HOG000195026 OMA:NTIGIEA
OrthoDB:EOG40S3QS RefSeq:XP_662466.1 ProteinModelPortal:Q5B3L8
SMR:Q5B3L8 STRING:Q5B3L8 EnsemblFungi:CADANIAT00005543
GeneID:2872661 KEGG:ani:AN4862.2 Uniprot:Q5B3L8
Length = 417
Score = 360 (131.8 bits), Expect = 4.9e-32, P = 4.9e-32
Identities = 113/335 (33%), Positives = 165/335 (49%)
Query: 379 SFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRAL 438
S G+GLKLD+ D + + + E + L GNTLGV A++ +A LS + + A
Sbjct: 8 SLEGKGLKLDSAADIEAHIQPLLESTDYTEVRLGGNTLGVPASERLAAVLSTQKSLEVAE 67
Query: 439 WKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFA 498
D+FT R+ +EIPDAL +L N L + L ++LSDNAFG + L D L
Sbjct: 68 LADIFTSRLLSEIPDALTFLLNALLEIPT-LHTINLSDNAFGANTQKPLVDFLSRHIPLR 126
Query: 499 XXXXXXXXXXXXITGCKLLSKALHDCY---ESSKKEGS--PLALKVFIAGRNRLENEGAK 553
G + +KAL + E ++ G PL L+ + GRNRLEN
Sbjct: 127 HLVLNNNGMGPE-AGSNI-AKALTELAQRKEEARSGGKEVPL-LESIVCGRNRLENGSMA 183
Query: 554 MLAAVFKKLKT-LERVEMPQNGIYHVGIT-ALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
A +K + V+M QNGI GI+ L + L L+L DNT T G+ L
Sbjct: 184 AWAHAYKAHAAGIRSVKMTQNGIRQEGISHLLKEGLSHASALEVLDLQDNTFTITGSTAL 243
Query: 612 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVK 669
+S PSL L +GDCLL + G +A+ L N +E + L N+IS +G +
Sbjct: 244 AGVVSGWPSLRELGVGDCLLSARGGIKLAQALAKAKNQKVEILRLQYNDISAEGVKQFLH 303
Query: 670 AMKNKTK-LKQINVSENQFGEEGVE--EMEKLMKS 701
A K L++I ++ N+F EE V E+ +L++S
Sbjct: 304 AAKTALPALRRIELNGNKFQEEDVNVTELSELLES 338
>UNIPROTKB|B0QYT4 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 GO:GO:0048471
GO:GO:0007165 EMBL:AL035681 GO:GO:0032853 GO:GO:0005098
PANTHER:PTHR24113 UniGene:Hs.183800 HGNC:HGNC:9854 ChiTaRS:RANGAP1
Gene3D:1.25.40.200 EMBL:AL035659 IPI:IPI00879993 SMR:B0QYT4
STRING:B0QYT4 Ensembl:ENST00000452543 HOGENOM:HOG000199972
HOVERGEN:HBG096813 Uniprot:B0QYT4
Length = 133
Score = 333 (122.3 bits), Expect = 4.0e-29, P = 4.0e-29
Identities = 71/133 (53%), Positives = 89/133 (66%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ EDAK ++ I + L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
NT+GV AA+ IA AL K KR W DMFTGR++TEIP AL LG GL AGA+LVELD
Sbjct: 59 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELD 118
Query: 474 LSDNAFGPIGVEG 486
LSDNAFGP GV+G
Sbjct: 119 LSDNAFGPDGVQG 131
>SGD|S000004848 [details] [associations]
symbol:RNA1 "GTPase activating protein (GAP) for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0016072 "rRNA
metabolic process" evidence=IMP] [GO:0006404 "RNA import into
nucleus" evidence=IMP] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006399 "tRNA metabolic process" evidence=IMP] [GO:0005098 "Ran
GTPase activator activity" evidence=IDA;IMP] [GO:0006606 "protein
import into nucleus" evidence=IDA] [GO:0000054 "ribosomal subunit
export from nucleus" evidence=IMP] [GO:0006407 "rRNA export from
nucleus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
SGD:S000004848 GO:GO:0016021 GO:GO:0005829 GO:GO:0005634
EMBL:BK006946 GO:GO:0006606 GO:GO:0006348 EMBL:Z49939 GO:GO:0006399
GO:GO:0016072 GO:GO:0000054 GO:GO:0006404 GO:GO:0006407
eggNOG:COG5238 KO:K14319 GeneTree:ENSGT00440000039203 OMA:AEETAYV
GO:GO:0005098 HOGENOM:HOG000195026 OrthoDB:EOG40S3QS EMBL:M27143
EMBL:M27142 EMBL:X17376 EMBL:X57160 PIR:A32492 RefSeq:NP_013962.1
ProteinModelPortal:P11745 SMR:P11745 DIP:DIP-2509N IntAct:P11745
MINT:MINT-558123 STRING:P11745 PaxDb:P11745 PeptideAtlas:P11745
EnsemblFungi:YMR235C GeneID:855275 KEGG:sce:YMR235C CYGD:YMR235c
NextBio:978897 Genevestigator:P11745 GermOnline:YMR235C
Uniprot:P11745
Length = 407
Score = 332 (121.9 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 103/346 (29%), Positives = 175/346 (50%)
Query: 369 VESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADAL 428
V ++ S +G+ LKL +D K ++ + +K L+L GNT+G A++A+A +
Sbjct: 7 VPQHEEEQVYSISGKALKLTTSDDIKPYLEELAALKTCTKLDLSGNTIGTEASEALAKCI 66
Query: 429 SKHEHFKRAL----WKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGV 484
+++ + +L + D++T R+ E+ D+L++L L + L ++LSDNAFG +
Sbjct: 67 AENTQVRESLVEVNFADLYTSRLVDEVVDSLKFLLPVLLKC-PHLEIVNLSDNAFGLRTI 125
Query: 485 EGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGR 544
E L D + + G + + KAL ++ K P L+ FI GR
Sbjct: 126 ELLEDYIAHAVNIKHLILSNNGMGP-FAG-ERIGKALFHLAQNKKAASKPF-LETFICGR 182
Query: 545 NRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGI-TALSDAFEENKNLRHLNLNDNT 602
NRLEN A LA K + L+ V++ QNGI G+ T + + KNL L+L DNT
Sbjct: 183 NRLENGSAVYLALGLKSHSEGLKVVKLYQNGIRPKGVATLIHYGLQYLKNLEILDLQDNT 242
Query: 603 ITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNT--TLEDVNLTCNEI 659
T ++ L +AL SL LNL DCLLK+AG+ + K T+ L + NE+
Sbjct: 243 FTKHASLILAKALPTWKDSLFELNLNDCLLKTAGSDEVFKVFTEVKFPNLHVLKFEYNEM 302
Query: 660 SVQG-GLDLVKAMK--NKTKLKQINVSENQFGEEGVEEMEKLMKSF 702
+ + + + AM+ N +L+++ ++ N+ E+ + ++ L F
Sbjct: 303 AQETIEVSFLPAMEKGNLPELEKLEINGNRLDEDS-DALDLLQSKF 347
>UNIPROTKB|G4MXL7 [details] [associations]
symbol:MGG_01248 "Ran GTPase-activating protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR027038 GO:GO:0043581
EMBL:CM001232 KO:K14319 PANTHER:PTHR24113 RefSeq:XP_003714155.1
ProteinModelPortal:G4MXL7 EnsemblFungi:MGG_01248T0 GeneID:2679480
KEGG:mgr:MGG_01248 Uniprot:G4MXL7
Length = 421
Score = 328 (120.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 100/330 (30%), Positives = 159/330 (48%)
Query: 382 GQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKD 441
G+ LKLD ED + A+ + + + + GNTLG+ A K + + LS + + A D
Sbjct: 12 GKALKLDTAEDLDAHIAALKAMDDVEEVRILGNTLGIGACKRLGEVLSTKNNLQVANLAD 71
Query: 442 MFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXX 501
+FTGR+ EIP+AL +L + L ++L+DNAFG + +AD L S
Sbjct: 72 IFTGRLLNEIPEALTHLLTQITNL-PNLTTVNLNDNAFGINTYKPVADFLSSHVPLQHLY 130
Query: 502 XXXXXXX--XXITGCKLLSKALHDCYESSKKEGSPLA--LKVFIAGRNRLENEGAKMLAA 557
+ LS+ L+D E ++KEG L+ I GRNRLEN K A
Sbjct: 131 LNNNGLGPEAGMYIADALSE-LYDKKEQARKEGRTDVPDLETVICGRNRLENGSMKAWAK 189
Query: 558 VFKKLKTLERVEMPQNGIYHVGIT-ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 616
F K L+ V+M QNGI GIT L++ ++ L+L DNT T GA L +
Sbjct: 190 AFSKHDKLKEVKMVQNGIRQEGITHLLTEGLSNTLAIQVLDLQDNTFTITGATALAKIAP 249
Query: 617 KLPSLAILNLGDCLLKSAGASSIAKYLTD--NTTLEDVNLTCNEISVQGGLDLVKAMKNK 674
L L + D L + G +++ L N LE + + N+++ + +K+
Sbjct: 250 TWTDLRELGVSDSYLGAKGGRLLSRALAKGKNEKLETLRMQYNDMNARTLKSFADTVKDG 309
Query: 675 TK-LKQINVSENQFGEEGVE--EMEKLMKS 701
LK+I ++ N+ E+ V ++KL+++
Sbjct: 310 LPALKKIEINGNKLSEDDVSIAALQKLLEA 339
>UNIPROTKB|H0Y4Q3 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR009109 InterPro:IPR027038 GO:GO:0007165
EMBL:AL035681 GO:GO:0032853 GO:GO:0005098 PANTHER:PTHR24113
HGNC:HGNC:9854 ChiTaRS:RANGAP1 Gene3D:1.25.40.200 EMBL:AL035659
ProteinModelPortal:H0Y4Q3 PRIDE:H0Y4Q3 Ensembl:ENST00000446258
Bgee:H0Y4Q3 Uniprot:H0Y4Q3
Length = 253
Score = 314 (115.6 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 64/150 (42%), Positives = 98/150 (65%)
Query: 560 KKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP 619
K + TLE V MPQNGI H GITAL+ AF N LR +NLNDNT T KGA+ + + L L
Sbjct: 101 KVIGTLEEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLR 160
Query: 620 SLAILNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLK 678
+ ++N GDCL++S GA +IA + L+++NL+ EI L + +AM +K +L+
Sbjct: 161 QVEVINFGDCLVRSKGAVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELE 220
Query: 679 QINVSENQFGEEGVEEMEKLMKSFGMAAAL 708
+++++ N GEEG E+++++++ F MA L
Sbjct: 221 KLDLNGNTLGEEGCEQLQEVLEGFNMAKVL 250
Score = 305 (112.4 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 86/240 (35%), Positives = 117/240 (48%)
Query: 416 LGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLS 475
+GV AA+ IA AL K KR W DMFTGR++TEIP AL LG GL AGA+LVELDLS
Sbjct: 2 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 61
Query: 476 DNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLS--KALHDCYESSKKEG- 532
DNAFGP GV+G LL+SS CF I G K++ + +H G
Sbjct: 62 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKVIGTLEEVHMPQNGINHPGI 121
Query: 533 SPLA--------LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 584
+ LA L+V N +GA +A K L+ +E + + G A++
Sbjct: 122 TALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIA 181
Query: 585 DAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 643
DA L+ LNL+ I A+ + +A++ L L+L L G + + L
Sbjct: 182 DAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVL 241
>UNIPROTKB|B0QYT5 [details] [associations]
symbol:RANGAP1 "Ran GTPase-activating protein 1"
species:9606 "Homo sapiens" [GO:0005098 "Ran GTPase activator
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR027038 GO:GO:0048471
EMBL:AL035681 PANTHER:PTHR24113 UniGene:Hs.183800 HGNC:HGNC:9854
ChiTaRS:RANGAP1 EMBL:AL035659 HOGENOM:HOG000199972 IPI:IPI00877824
SMR:B0QYT5 STRING:B0QYT5 Ensembl:ENST00000418067 Uniprot:B0QYT5
Length = 100
Score = 226 (84.6 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 354 NDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
++D++ + + L V GQ LSF G+ LKL+ EDAK ++ I + L +L LEG
Sbjct: 3 SEDIAKLAETLAKTQVAGGQ----LSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEG 58
Query: 414 NTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDAL 455
NT+GV AA+ IA AL K KR W DMFTGR++TEIP AL
Sbjct: 59 NTVGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPAL 100
>UNIPROTKB|Q7RTR2 [details] [associations]
symbol:NLRC3 "Protein NLRC3" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0042110 "T cell activation" evidence=IEP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005524 GO:GO:0005737 GO:GO:0042110
GO:GO:0032088 GO:GO:0007249 InterPro:IPR007111 PROSITE:PS50837
EMBL:BK001112 EMBL:AY601811 EMBL:AK090431 EMBL:AK074109
EMBL:AF501291 EMBL:AF501292 IPI:IPI00333975 IPI:IPI00385743
IPI:IPI00854580 IPI:IPI00854840 RefSeq:NP_849172.2
UniGene:Hs.592091 ProteinModelPortal:Q7RTR2 SMR:Q7RTR2
STRING:Q7RTR2 PhosphoSite:Q7RTR2 DMDM:158563940 PaxDb:Q7RTR2
PRIDE:Q7RTR2 Ensembl:ENST00000301749 GeneID:197358 KEGG:hsa:197358
UCSC:uc010btn.3 CTD:197358 GeneCards:GC16M003592 HGNC:HGNC:29889
neXtProt:NX_Q7RTR2 PharmGKB:PA162397626 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 InParanoid:Q7RTR2
GenomeRNAi:197358 NextBio:89661 ArrayExpress:Q7RTR2 Bgee:Q7RTR2
CleanEx:HS_NLRC3 Genevestigator:Q7RTR2 Uniprot:Q7RTR2
Length = 1065
Score = 238 (88.8 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 90/334 (26%), Positives = 151/334 (45%)
Query: 376 TKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFK 435
T L G + + AK + DA+ + L SL+L+GNT+ + A+++A+AL+ +
Sbjct: 697 TSLDLRGNSI---GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASN---- 749
Query: 436 RALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSC 495
R L M + + P + + + L+Q L EL S N+ G G + LA+ L+ +
Sbjct: 750 RTL--SMLHLQKNSIGPMGAQRMADALKQ-NRSLKELMFSSNSIGDGGAKALAEALKVNQ 806
Query: 496 CFAX----XXXXXXXXXXXITG--CK---LLSKALHDCYESSKKEGSPLALKVFIAGR-- 544
+ G C LLS +L + S EG+ A
Sbjct: 807 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRE--NSISPEGAQAIAHALCANSTL 864
Query: 545 -------NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 597
N L ++GA+ +A ++ +TL + + N I AL A + N++L L+
Sbjct: 865 KNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLD 924
Query: 598 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 657
L +N I GA + +AL +L L L + ++GA + + L N TLE ++L N
Sbjct: 925 LQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGN 984
Query: 658 EISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
I V G L A+K + L+++N+ EN G +G
Sbjct: 985 AIGVAGAKALANALKVNSSLRRLNLQENSLGMDG 1018
Score = 230 (86.0 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 99/353 (28%), Positives = 152/353 (43%)
Query: 368 SVESGQDST--KLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIA 425
SV SG+D K+S A ++ NK AK + ++ + L SL+L GN++G AKA+A
Sbjct: 659 SVLSGKDCRIQKISLAEN--QISNK-GAKALARSLLVNRSLTSLDLRGNSIGPQGAKALA 715
Query: 426 DALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVE 485
DAL R L G T D R + L + L L L N+ GP+G +
Sbjct: 716 DALK----INRTLTSLSLQGN--TVRDDGARSMAEALA-SNRTLSMLHLQKNSIGPMGAQ 768
Query: 486 GLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH--------DCYESSKKEGSPLAL 537
+AD L+ + G K L++AL D +S + AL
Sbjct: 769 RMADALKQNRSLKELMFSSNSIGDG--GAKALAEALKVNQGLESLDLQSNSISDAGVAAL 826
Query: 538 KVFIAGRNRL------EN----EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 587
+ L EN EGA+ +A TL+ +++ N ++ G A++ A
Sbjct: 827 MGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAV 886
Query: 588 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 647
EN+ L L+L N I A LGQAL SL L+L + + GA ++A+ L NT
Sbjct: 887 RENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNT 946
Query: 648 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
L + L I G L +A+ L+ +++ N G G + + +K
Sbjct: 947 ALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALK 999
Score = 192 (72.6 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 81/345 (23%), Positives = 150/345 (43%)
Query: 376 TKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFK 435
T LS G ++ D A+ + +A+ + L L+L+ N++G A+ +ADAL ++ K
Sbjct: 725 TSLSLQGNTVRDDG---ARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLK 781
Query: 436 RALWKDMFTGRMKTE-IPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSS 494
++ G + + +AL+ + GL+ LDL N+ GV L L ++
Sbjct: 782 ELMFSSNSIGDGGAKALAEALK-VNQGLES-------LDLQSNSISDAGVAALMGALCTN 833
Query: 495 CCF--------------AXXXXXXXXXXXXITGCKLLSKALHD----CYESSKKEGSPLA 536
A + L + LHD + +E L
Sbjct: 834 QTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLT 893
Query: 537 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 596
+ + N ++ A+ L + ++L +++ +N I G A++ A + N L L
Sbjct: 894 -SLHLQW-NFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTAL 951
Query: 597 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 656
L +I GA LG+AL+ +L IL+L + AGA ++A L N++L +NL
Sbjct: 952 YLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQE 1011
Query: 657 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
N + + G + + A+ +L+ IN+ N G+ G + + +K+
Sbjct: 1012 NSLGMDGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKT 1056
Score = 191 (72.3 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 70/258 (27%), Positives = 109/258 (42%)
Query: 469 LVELDLSDNAFGPIGVEGLADLL---RSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
L LDL N+ GP G + LAD L R+ + L S
Sbjct: 696 LTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSML 755
Query: 526 ESSKKEGSPL-------------ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 572
K P+ +LK + N + + GAK LA K + LE +++
Sbjct: 756 HLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQS 815
Query: 573 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 632
N I G+ AL A N+ L L+L +N+I+ +GA + AL +L L+L LL
Sbjct: 816 NSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLH 875
Query: 633 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 692
GA +IA + +N TL ++L N I L +A++ L +++ EN G++G
Sbjct: 876 DQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGA 935
Query: 693 EEMEKLMKSFGMAAALVL 710
+ + +K AL L
Sbjct: 936 CAVARALKVNTALTALYL 953
Score = 168 (64.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 58/237 (24%), Positives = 109/237 (45%)
Query: 455 LRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGC 514
+ LG+ L R+ ++ L++N G + LA L + G
Sbjct: 654 MELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQ--GA 711
Query: 515 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 574
K L+ AL + + L+L+ G N + ++GA+ +A +TL + + +N
Sbjct: 712 KALADAL-----KINRTLTSLSLQ----G-NTVRDDGARSMAEALASNRTLSMLHLQKNS 761
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 634
I +G ++DA ++N++L+ L + N+I GA L +AL L L+L + A
Sbjct: 762 IGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDA 821
Query: 635 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
G +++ L N TL ++L N IS +G + A+ + LK ++++ N ++G
Sbjct: 822 GVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQG 878
Score = 166 (63.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 545 NRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
N+ ++ ++L +V K ++++ + +N I + G AL+ + N++L L+L N+I
Sbjct: 647 NQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSI 706
Query: 604 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 663
+GA L AL +L L+L ++ GA S+A+ L N TL ++L N I G
Sbjct: 707 GPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMG 766
Query: 664 GLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+ A+K LK++ S N G+ G + + + +K
Sbjct: 767 AQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALK 803
>TAIR|locus:2099207 [details] [associations]
symbol:RANGAP1 "AT3G63130" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000072 "M phase specific
microtubule process" evidence=TAS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA;TAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0032153 "cell division
site" evidence=IDA] [GO:0000280 "nuclear division" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0006406 "mRNA export from nucleus" evidence=RCA]
[GO:0006913 "nucleocytoplasmic transport" evidence=RCA] [GO:0007000
"nucleolus organization" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0048527 "lateral root development"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
GO:GO:0005886 GO:GO:0009507 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005819 GO:GO:0032153 GO:GO:0005096
GO:GO:0043547 GO:GO:0031965 GO:GO:0000910 GO:GO:0006606
GO:GO:0009524 GO:GO:0009504 EMBL:AL163816 UniGene:At.48804
UniGene:At.5159 GO:GO:0000072 InterPro:IPR025265 Pfam:PF13943
EMBL:AF214559 EMBL:AY034918 EMBL:AY150448 IPI:IPI00544809
PIR:T48102 RefSeq:NP_001190166.1 RefSeq:NP_191872.1 HSSP:P41391
ProteinModelPortal:Q9LE82 SMR:Q9LE82 DIP:DIP-46423N IntAct:Q9LE82
STRING:Q9LE82 PaxDb:Q9LE82 PRIDE:Q9LE82 EnsemblPlants:AT3G63130.1
EnsemblPlants:AT3G63130.2 GeneID:825488 KEGG:ath:AT3G63130
TAIR:At3g63130 eggNOG:COG5238 HOGENOM:HOG000241563
InParanoid:Q9LE82 KO:K14319 OMA:DFQPRTF PhylomeDB:Q9LE82
ProtClustDB:CLSN2684304 Genevestigator:Q9LE82 Uniprot:Q9LE82
Length = 535
Score = 226 (84.6 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 82/339 (24%), Positives = 151/339 (44%)
Query: 359 DILKK--LESISVESGQDSTKL-SFAGQGLKLDNKEDAKVIVDAINEVK-VLVSLNLEGN 414
D++K+ E VE +D +G +E+A+ ++ + + + +
Sbjct: 98 DVIKRGPQEESEVEVSKDGDVFFDISGGSRAFIEEEEARDLLRPLADPRNSYTKIRFSNR 157
Query: 415 TLGVNAAKAIADALSK-HEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELD 473
+ G AAK A LS + D GR + E + + + L+ G++L L+
Sbjct: 158 SFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALE--GSKLRYLN 215
Query: 474 LSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS 533
LSDNA G G+ A L+ S I+ + ++A+ + S+ K
Sbjct: 216 LSDNALGEKGIRAFASLINSQ----HDLEELYLMNDGIS--EDAARAVRELLPSTDK--- 266
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
++V N +EGA +A + ++ +LE I G AL++A E +L
Sbjct: 267 ---IRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHL 323
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT-TLEDV 652
+ L+L DN +G I L + LS L L + + L+ G ++++ L + +LE +
Sbjct: 324 KKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVL 383
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
L N+I+V+ +L + +K L ++N+SEN+ +EG
Sbjct: 384 ELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEG 422
Score = 167 (63.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 64/230 (27%), Positives = 96/230 (41%)
Query: 472 LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKE 531
L +N G G +A+++R C + G L++AL C K
Sbjct: 270 LQFHNNMTGDEGATAIAEIVRE--CPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKK-- 325
Query: 532 GSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK 591
L L+ N EG LA L L + M + G ALS+A ++
Sbjct: 326 ---LDLR-----DNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSA 377
Query: 592 -NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLE 650
+L L L N IT K L ++ SLA LNL + LK G IAK + + L
Sbjct: 378 PSLEVLELAGNDITVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLV 437
Query: 651 DVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+V+L+ N I G L + + K K +N++ N EEG++E+ + K
Sbjct: 438 EVDLSTNMIRRAGARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFK 487
Score = 149 (57.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 46/176 (26%), Positives = 80/176 (45%)
Query: 527 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 586
SS EGS L + N L +G + A++ LE + + +GI A+ +
Sbjct: 203 SSALEGSKL--RYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVREL 260
Query: 587 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 646
+R L ++N +GA + + + + PSL + S G ++A+ L
Sbjct: 261 LPSTDKIRVLQFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHC 320
Query: 647 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKS 701
+ L+ ++L N V+GG+ L K + T L +I +S +EG E + E L+KS
Sbjct: 321 SHLKKLDLRDNMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKS 376
>ZFIN|ZDB-GENE-061026-2 [details] [associations]
symbol:rspry1 "ring finger and SPRY domain containing
1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 ZFIN:ZDB-GENE-061026-2 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GeneTree:ENSGT00530000063442
HOVERGEN:HBG057205 OMA:NINAMLN EMBL:BX470162 EMBL:BX470074
IPI:IPI00505851 UniGene:Dr.132250 Ensembl:ENSDART00000090608
InParanoid:Q1LX67 Uniprot:Q1LX67
Length = 580
Score = 134 (52.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ ++GW++V+ S+V VIP+D+PLGPAVI L + D+ D L
Sbjct: 125 PPYSMITLHEMAETDDGWLEVVQSLVRVIPLDDPLGPAVITL-----LLDECPLPTKDAL 179
Query: 362 KKLESI 367
+KL +
Sbjct: 180 QKLSDM 185
Score = 131 (51.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 935 DTVIRLCKMFDLSKESSTKGRRTPCQQCNMCIILGLLAEKLAGPSSVAMLTQGTLEYLVA 994
D + +L M +LS + + P + N +LG LAEKLAGP+S+A+L+ GTLEYL+
Sbjct: 177 DALQKLSDMLNLSAAVARQDALIPAKHRNTTAVLGCLAEKLAGPASIALLSPGTLEYLLE 236
Query: 995 NLS 997
+LS
Sbjct: 237 SLS 239
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/140 (23%), Positives = 54/140 (38%)
Query: 785 LAAP-SVSLFNSLGPNCAQLFLDEINSEPEDRYLESMLLAIMKXXXXXXXXXXXXXXXXX 843
LA P S++L L P + L+ ++SE + L+A+ K
Sbjct: 217 LAGPASIAL---LSPGTLEYLLESLSSEAHPTVMLFALIALEKFSQTSENKLTVSES--- 270
Query: 844 XFECTKVLYRELFNWASNSDKLSTVTNAL----LVHLGLIKCEDKSF---KINY-NLNGC 895
C L +WA N D L L +L IK E + F K+N N+N
Sbjct: 271 ---CISDRLSVLESWADNLDYLKRQVGFCAQWSLDNL-FIK-EGRQFTYEKVNLSNINAM 325
Query: 896 MTAVRLLSEAKLLPSLTESQ 915
+ + + K+ P+ E++
Sbjct: 326 LNSNDVSEYLKISPTGLEAR 345
>TAIR|locus:2150285 [details] [associations]
symbol:RANGAP2 "AT5G19320" species:3702 "Arabidopsis
thaliana" [GO:0005098 "Ran GTPase activator activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=RCA;TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] GO:GO:0005783
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005635 GO:GO:0005819 GO:GO:0005096 GO:GO:0043547
GO:GO:0009651 GO:GO:0031965 GO:GO:0006913 EMBL:AF296837
GO:GO:0009524 InterPro:IPR025265 Pfam:PF13943 HOGENOM:HOG000241563
KO:K14319 ProtClustDB:CLSN2684304 EMBL:AF214560 IPI:IPI00541783
PIR:T52068 RefSeq:NP_197433.1 UniGene:At.11887
ProteinModelPortal:Q9M651 SMR:Q9M651 IntAct:Q9M651 STRING:Q9M651
PaxDb:Q9M651 PRIDE:Q9M651 EnsemblPlants:AT5G19320.1 GeneID:832052
KEGG:ath:AT5G19320 TAIR:At5g19320 eggNOG:NOG313064
InParanoid:Q9M651 OMA:NTIGIEA PhylomeDB:Q9M651
Genevestigator:Q9M651 Uniprot:Q9M651
Length = 545
Score = 209 (78.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 76/304 (25%), Positives = 131/304 (43%)
Query: 391 EDAKVIVDAINEV-KVLVSLNLEGNTLGVNAAKAIADAL-SKHEHFKRALWKDMFTGRMK 448
E+A+ ++ + E + + G+ AA+ L S + K D GR +
Sbjct: 138 EEAEELLKPLKEPGNAYTKICFSNRSFGLGAARVAEPILASLKDQLKEVDLSDFVAGRPE 197
Query: 449 TEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXX 508
E + + + LQ G+ L L+LSDNA G GV LL+S
Sbjct: 198 LEALEVMNIFSDALQ--GSILSSLNLSDNALGEKGVRAFGALLKS----LSSLEELYLMN 251
Query: 509 XXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 568
I+ K ++A+ + S++ L+V N +EGA +A V K+ LE
Sbjct: 252 DGIS--KEAAQAVSELIPSTEN------LRVLHFHNNMTGDEGALAIAEVVKRSPLLENF 303
Query: 569 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 628
+ G ALS+A E ++ L+L DN + + L + LS + L L
Sbjct: 304 RCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMTELYLSY 363
Query: 629 CLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 687
L+ GA +I L ++ + +E + + N+I+V+ + + K L ++N+SEN+
Sbjct: 364 LNLEDEGAIAIVNALKESASPIEVLEMAGNDITVEAASAIAACVAAKQDLNKLNLSENEL 423
Query: 688 GEEG 691
+EG
Sbjct: 424 KDEG 427
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 40/184 (21%), Positives = 86/184 (46%)
Query: 527 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDA 586
S K + + L F+AGR LE + + + L + + N + G+ A
Sbjct: 178 SLKDQLKEVDLSDFVAGRPELEALEVMNIFSDALQGSILSSLNLSDNALGEKGVRAFGAL 237
Query: 587 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDN 646
+ +L L L ++ I+ + A + + + +L +L+ + + GA +IA+ + +
Sbjct: 238 LKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTGDEGALAIAEVVKRS 297
Query: 647 TTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAA 706
LE+ + + +GG+ L +A+++ T ++++++ +N FG E + K + SF
Sbjct: 298 PLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSSFKHMT 357
Query: 707 ALVL 710
L L
Sbjct: 358 ELYL 361
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 35/156 (22%), Positives = 73/156 (46%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N L +G + A+ K L +LE + + +GI A+S+ +NLR L+ ++N
Sbjct: 224 NALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLRVLHFHNNMTG 283
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+GA+ + + + + P L + S G ++++ L T +E ++L N + G
Sbjct: 284 DEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAG 343
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+ L K + + + ++ +S +EG + +K
Sbjct: 344 VSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALK 379
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 37/158 (23%), Positives = 71/158 (44%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTI 603
N E L+ K + + + + G A+ +A +E+ + + L + N I
Sbjct: 336 NMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGNDI 395
Query: 604 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQ 662
T + A + ++ L LNL + LK G IA + + ++ L+ ++++ N I
Sbjct: 396 TVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYIDMSTNYIRRA 455
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
G L + K K +N+ N EEG+EE++++ K
Sbjct: 456 GARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFK 493
>MGI|MGI:2444070 [details] [associations]
symbol:Nlrc3 "NLR family, CARD domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0007249 "I-kappaB kinase/NF-kappaB cascade"
evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO;ISS] [GO:0042110 "T
cell activation" evidence=ISS] MGI:MGI:2444070 GO:GO:0005524
GO:GO:0005737 GO:GO:0042110 GO:GO:0032088 GO:GO:0007249
InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG69209
HOGENOM:HOG000108875 HOVERGEN:HBG055285 EMBL:AK220314 EMBL:AK079766
EMBL:AK084199 EMBL:AK171971 EMBL:BC130223 IPI:IPI00652368
IPI:IPI00671345 IPI:IPI00677124 IPI:IPI00678735 IPI:IPI00828619
UniGene:Mm.215994 ProteinModelPortal:Q5DU56 SMR:Q5DU56
PhosphoSite:Q5DU56 PRIDE:Q5DU56 Ensembl:ENSMUST00000180200
UCSC:uc007xzc.1 UCSC:uc007xzd.1 UCSC:uc007xze.1
GeneTree:ENSGT00690000101889 OrthoDB:EOG4BZN26 CleanEx:MM_NLRC3
Genevestigator:Q5DU56 Uniprot:Q5DU56
Length = 1064
Score = 212 (79.7 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 97/366 (26%), Positives = 162/366 (44%)
Query: 354 NDDVSDILKKLESISVESGQDST--KLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNL 411
N+ D + +L SV SG+D K+S A ++ NK AK + ++ + L++L+L
Sbjct: 645 NNQFQDPVMELLG-SVLSGKDCRIRKISLAEN--QIGNK-GAKALARSLLVNRSLITLDL 700
Query: 412 EGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVE 471
N++G AKA+ADAL R L + + D + + L + +
Sbjct: 701 RSNSIGPPGAKALADALK----INRTLTSLSLQSNVIKD--DGVMCVAEALV-SNQTISM 753
Query: 472 LDLSDNAFGPIGVEGLADLLRSS-----CCFAXXXXXXXXXXXXITGCKLLSKALH--DC 524
L L N G IG + +AD L+ + F+ K+ ++ L D
Sbjct: 754 LQLQKNLIGLIGAQQMADALKQNRSLKALMFSSNTIGDRGAIALAEALKV-NQILENLDL 812
Query: 525 YESSKKE-GSPLALKVFIAGR-----NRLEN----EGAKMLAAVFKKLKTLERVEMPQNG 574
+S + G + ++ + + N EN EGA+ L + TL+ +++ N
Sbjct: 813 QSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANL 872
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 634
++ G A++ A EN +L HL+L N I A LGQAL +L L+L + +
Sbjct: 873 LHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDE 932
Query: 635 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 694
GASS+A L NTTL + L I QG L +A+ L+ +++ N G G +
Sbjct: 933 GASSVAGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKA 992
Query: 695 MEKLMK 700
+ +K
Sbjct: 993 LANALK 998
Score = 201 (75.8 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 87/330 (26%), Positives = 144/330 (43%)
Query: 383 QGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNA-AKAIADALSKHEHFKRALWK- 440
Q L+LDN + +++ + V + +L N A AL++ R+L
Sbjct: 639 QSLRLDNNQFQDPVMELLGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITL 698
Query: 441 DMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXX 500
D+ R + P + L + L+ L L L N GV +A+ L S+ +
Sbjct: 699 DL---RSNSIGPPGAKALADALK-INRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISML 754
Query: 501 XXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK 560
+ G + ++ AL K+ S LK + N + + GA LA K
Sbjct: 755 QLQKNLIG--LIGAQQMADAL-------KQNRS---LKALMFSSNTIGDRGAIALAEALK 802
Query: 561 KLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS 620
+ LE +++ N I +G+T L A N+ L LNL +N+I+ +GA L QAL + +
Sbjct: 803 VNQILENLDLQSNSISDMGVTVLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNT 862
Query: 621 LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 680
L L+L LL GA +IA + +N +L ++L N I L +A++ L +
Sbjct: 863 LKHLDLTANLLHDRGAQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTL 922
Query: 681 NVSENQFGEEGVEEMEKLMKSFGMAAALVL 710
++ EN G+EG + +K AL L
Sbjct: 923 DLQENAIGDEGASSVAGALKVNTTLIALYL 952
Score = 199 (75.1 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 82/320 (25%), Positives = 141/320 (44%)
Query: 393 AKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTE-I 451
AK + DA+ + L SL+L+ N + + +A+AL ++ + G + + +
Sbjct: 710 AKALADALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQM 769
Query: 452 PDALR---------YLGNGLQQAGA----------RLVE-LDLSDNAFGPIGVEGLADLL 491
DAL+ + N + GA +++E LDL N+ +GV L L
Sbjct: 770 ADALKQNRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRAL 829
Query: 492 RSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEG 551
S+ + G + L++AL C ++ K L L N L + G
Sbjct: 830 CSNQTLSSLNLRENSISPE--GAQALTQAL--CRNNTLKH---LDLTA-----NLLHDRG 877
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
A+ +A + +L + + N I AL A + N+ L L+L +N I +GA +
Sbjct: 878 AQAIAVAVGENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSV 937
Query: 612 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
AL +L L L + S GA ++ + LT N TLE ++L N++ G L A+
Sbjct: 938 AGALKVNTTLIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANAL 997
Query: 672 KNKTKLKQINVSENQFGEEG 691
K + L+++N+ EN G +G
Sbjct: 998 KLNSSLRRLNLQENSLGMDG 1017
Score = 180 (68.4 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 84/349 (24%), Positives = 153/349 (43%)
Query: 374 DSTKLSFAGQGLKLDN---KEDAKVIV-DAINEVKVLVSLNLEGNTLGVNAAKAIADALS 429
D+ K++ L L + K+D + V +A+ + + L L+ N +G+ A+ +ADAL
Sbjct: 715 DALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALK 774
Query: 430 KHEHFKRALWKDMFTG-RMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLA 488
++ K ++ G R + +AL+ N + L LDL N+ +GV L
Sbjct: 775 QNRSLKALMFSSNTIGDRGAIALAEALKV--NQI------LENLDLQSNSISDMGVTVLM 826
Query: 489 DLLRSSCCFAXXXXXXXXXX----XXITG--CK--------LLSKALHD--CYESSKKEG 532
L S+ + +T C+ L + LHD + G
Sbjct: 827 RALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVG 886
Query: 533 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 592
+L N ++ A+ L + +TL +++ +N I G ++++ A + N
Sbjct: 887 ENHSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTT 946
Query: 593 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 652
L L L +I +GA LG+AL+ +L IL+L + +AGA ++A L N++L +
Sbjct: 947 LIALYLQVASIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRL 1006
Query: 653 NLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
NL N + + G + + A+ L IN+ N GE + + +K+
Sbjct: 1007 NLQENSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKT 1055
>MGI|MGI:1921935 [details] [associations]
symbol:4930451C15Rik "RIKEN cDNA 4930451C15 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1921935 GeneTree:ENSGT00640000091171
EMBL:AK039092 EMBL:AK132588 EMBL:AK143245 EMBL:AK161226
EMBL:BC115678 EMBL:BC115679 IPI:IPI00353515 IPI:IPI00406229
IPI:IPI00677034 RefSeq:NP_001138907.1 RefSeq:NP_083329.2
UniGene:Mm.38634 ProteinModelPortal:Q14BP6 SMR:Q14BP6 PRIDE:Q14BP6
Ensembl:ENSMUST00000023442 Ensembl:ENSMUST00000065125
Ensembl:ENSMUST00000100123 GeneID:74685 KEGG:mmu:74685
UCSC:uc007yle.2 UCSC:uc007ylf.2 eggNOG:NOG126824
HOGENOM:HOG000155712 HOVERGEN:HBG108751 InParanoid:Q14BP6
OMA:ISYNGFG OrthoDB:EOG4868CW NextBio:341384 Bgee:Q14BP6
CleanEx:MM_4930451C15RIK Genevestigator:Q14BP6 Uniprot:Q14BP6
Length = 391
Score = 187 (70.9 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 70/259 (27%), Positives = 116/259 (44%)
Query: 452 PDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXI 511
P +R L + L + + LDL DN G E LAD+LR + +
Sbjct: 91 PQGVRALASVLT-SNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLSENQIGAA- 148
Query: 512 TGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMP 571
G + + AL +P K+ + G NRLE + A+ LAA+ + L+ +++
Sbjct: 149 -GLQAICTAL---------ALNPTVEKMQLQG-NRLEEQAAQHLAALLLHHRGLKSLDLS 197
Query: 572 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 631
N + + L A EN L LNL+ N + GA + L L +L++
Sbjct: 198 YNQLNDLAGEILGPAVAENTGLTELNLSWNHLRGLGATAFARGLEANIFLKVLDISHNGF 257
Query: 632 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
+GAS+I L N LE++N+ N ISV G L L ++ L+ + +S+N +G
Sbjct: 258 GDSGASAIGDALRVNNVLEELNMRNNRISVSGALKLGLGLQVNQTLRILIISKNPIRSDG 317
Query: 692 VEEMEKLMKSFGMAAALVL 710
+ K +++ ++AL L
Sbjct: 318 CVGLLKSVRN-NKSSALEL 335
Score = 119 (46.9 bits), Expect = 0.00080, P = 0.00080
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 568 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 627
+ + G+ G+ AL+ N ++ L+L DN + GA L L K ++ ++L
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRKNSIISDVDLS 141
Query: 628 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 687
+ + +AG +I L N T+E + L N + Q L + + LK +++S NQ
Sbjct: 142 ENQIGAAGLQAICTALALNPTVEKMQLQGNRLEEQAAQHLAALLLHHRGLKSLDLSYNQL 201
Query: 688 GE 689
+
Sbjct: 202 ND 203
Score = 112 (44.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N L GA A + L+ +++ NG G +A+ DA N L LN+ +N I+
Sbjct: 227 NHLRGLGATAFARGLEANIFLKVLDISHNGFGDSGASAIGDALRVNNVLEELNMRNNRIS 286
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
GA+ LG L +L IL + ++S G + K + +N + L ++I V
Sbjct: 287 VSGALKLGLGLQVNQTLRILIISKNPIRSDGCVGLLKSVRNNKSSALELLDVSDIQVSRE 346
Query: 665 L-DLVKAM 671
DL +M
Sbjct: 347 CEDLASSM 354
Score = 68 (29.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 409 LNLEGNTLGVNAAKAIADALSKHEHFKRALWKDM-FTGRMKTEIPDALRYLGNGLQQAGA 467
LNL LG +A+A L+ + + KR +D G + D LR N +
Sbjct: 82 LNLRHRGLGPQGVRALASVLTSNPYIKRLDLRDNGLCGAGAEALADVLRK--NSI----- 134
Query: 468 RLVELDLSDNAFGPIGVEGLADLL 491
+ ++DLS+N G G++ + L
Sbjct: 135 -ISDVDLSENQIGAAGLQAICTAL 157
>UNIPROTKB|Q96P20 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0032621 "interleukin-18 production" evidence=IEA] [GO:0050701
"interleukin-1 secretion" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] [GO:0006954 "inflammatory
response" evidence=IMP] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0006917 "induction of apoptosis" evidence=NAS]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA] [GO:0072559 "NLRP3 inflammasome complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0051259
"protein oligomerization" evidence=TAS] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IDA]
[GO:0006952 "defense response" evidence=TAS] [GO:0009595 "detection
of biotic stimulus" evidence=TAS] [GO:0042834 "peptidoglycan
binding" evidence=TAS] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0050718 "positive regulation of interleukin-1
beta secretion" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0035872 "nucleotide-binding domain, leucine rich repeat
containing receptor signaling pathway" evidence=TAS] [GO:0045087
"innate immune response" evidence=TAS] [GO:0002674 "negative
regulation of acute inflammatory response" evidence=IMP]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IMP] [GO:0050713 "negative regulation of interleukin-1
beta secretion" evidence=IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IMP] GO:GO:0051259 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0006917 GO:GO:0050728
GO:GO:0006954 GO:GO:0045087 GO:GO:0035872 GO:GO:0051607
GO:GO:0006919 GO:GO:0043280 GO:GO:0051092 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
EMBL:CH471148 GO:GO:0042834 GO:GO:0072559 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0042347 eggNOG:NOG82860 HOVERGEN:HBG063656
CTD:114548 KO:K12800 OrthoDB:EOG4HX508 GO:GO:0050701 GO:GO:0032621
InterPro:IPR003590 SMART:SM00368 EMBL:AF410477 EMBL:AF427617
EMBL:AY051117 EMBL:AY051112 EMBL:AY051113 EMBL:AY051114
EMBL:AY051115 EMBL:AY051116 EMBL:AY056059 EMBL:AY056060
EMBL:AF468522 EMBL:AF420469 EMBL:AY092033 EMBL:AF418985
EMBL:AY422168 EMBL:AB208891 EMBL:AL606804 EMBL:AC104335
EMBL:BC117211 EMBL:BC143362 EMBL:BC143363 EMBL:AF054176
IPI:IPI00374129 IPI:IPI00451585 IPI:IPI00553033 IPI:IPI00556137
IPI:IPI00742837 RefSeq:NP_001073289.1 RefSeq:NP_001120933.1
RefSeq:NP_001120934.1 RefSeq:NP_001230062.1 RefSeq:NP_004886.3
RefSeq:NP_899632.1 UniGene:Hs.159483 PDB:3QF2 PDBsum:3QF2
ProteinModelPortal:Q96P20 SMR:Q96P20 DIP:DIP-41153N IntAct:Q96P20
STRING:Q96P20 PhosphoSite:Q96P20 DMDM:262527566 PRIDE:Q96P20
Ensembl:ENST00000336119 Ensembl:ENST00000348069
Ensembl:ENST00000366496 Ensembl:ENST00000366497
Ensembl:ENST00000391827 Ensembl:ENST00000391828 GeneID:114548
KEGG:hsa:114548 UCSC:uc001icr.3 UCSC:uc001ics.3 UCSC:uc001icv.3
UCSC:uc001icw.3 GeneCards:GC01P247579 HGNC:HGNC:16400 HPA:CAB009190
HPA:HPA012878 HPA:HPA017374 MIM:120100 MIM:191900 MIM:606416
MIM:607115 neXtProt:NX_Q96P20 Orphanet:1451 Orphanet:47045
Orphanet:575 PharmGKB:PA26512 InParanoid:Q96P20 OMA:IKMELLF
PhylomeDB:Q96P20 ChEMBL:CHEMBL1741208 GenomeRNAi:114548
NextBio:79079 ArrayExpress:Q96P20 Bgee:Q96P20 Genevestigator:Q96P20
GermOnline:ENSG00000162711 GO:GO:0009595 Uniprot:Q96P20
Length = 1036
Score = 185 (70.2 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 78/298 (26%), Positives = 129/298 (43%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L L+L N+LG + + + L R LW GR + + + + +
Sbjct: 743 LTELDLSDNSLGDPGMRVLCETLQHPGCNIRRLW----LGRCG--LSHECCFDISLVLSS 796
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
+LVELDLSDNA G G+ L L+ C + C L S D
Sbjct: 797 NQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLKKLWLVSCCLTSACCQDL- 847
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALS 584
+S S ++++ G N L + G +L K + L+++ + +G+ V +ALS
Sbjct: 848 -ASVLSTSHSLTRLYV-GENALGDSGVAILCEKAKNPQCNLQKLGLVNSGLTSVCCSALS 905
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL 643
N+NL HL L NT+ KG L + L L +L L +C L S ++ L
Sbjct: 906 SVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLSTLL 965
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLMK 700
T + +L ++L N++ G + + +K ++ L Q + +SE F E +E L +
Sbjct: 966 TSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQE 1023
>ZFIN|ZDB-GENE-050208-711 [details] [associations]
symbol:si:ch211-213a13.5 "si:ch211-213a13.5"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-050208-711
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
OrthoDB:EOG4TTGHK GeneTree:ENSGT00690000101934 eggNOG:NOG257844
HOVERGEN:HBG092009 EMBL:BX248395 EMBL:BX664621 IPI:IPI00899095
Ensembl:ENSDART00000138646 Uniprot:F6NX52
Length = 3009
Score = 206 (77.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 86/343 (25%), Positives = 152/343 (44%)
Query: 364 LESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDA-INEVKVLVSLNLEGNTLGVNAAK 422
++ +SV K+S + +ED + A I L LNL GN LG +
Sbjct: 1832 VKKLSVLLQDKHCKISTLTLNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSGIS 1891
Query: 423 AIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPI 482
I L E+ + L K + +E + + L + L+ + L+ELDL N G
Sbjct: 1892 KICPLL---ENKQCGLEKLSLSDCSISE--EGYKALASALKSNPSHLIELDLRGNDPGQS 1946
Query: 483 GVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEG-SPLALKVFI 541
GV+ L DL + C ++G S A C +K G SPL L
Sbjct: 1947 GVKELTDLSQYRC--------KTLTIRFLSG----SGAEEACAHLTKVVGISPLLLTELD 1994
Query: 542 AGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLND 600
++L++ +G K+ A + +E++++ + L+ NL+ LNLN+
Sbjct: 1995 LNEDKLKDLDGEKLSALLMDSHSKVEKMKLNNCELTEKSCPVLAAVLSSKTNLKELNLNN 2054
Query: 601 NTITYKGAIPLGQALSK-LPSLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNE 658
+ + G + + L + L IL L C L S++A L +D+++L+D++L+ N
Sbjct: 2055 SRLLDSGVRVICEGLKNPVCELKILKLSKCNLTEESCSALASVLRSDSSSLKDLDLSNNN 2114
Query: 659 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
+ G L +K+ +KL+++N+S+ EEG + + + S
Sbjct: 2115 LQDSGVKLLTDGLKH-SKLEKLNLSDCSISEEGYKALASALGS 2156
Score = 164 (62.8 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 96/373 (25%), Positives = 156/373 (41%)
Query: 334 NPLGPAVIELNHKGRMTDKPNDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDA 393
NPL + ELN + D+ D + +KKL S+ ++ K+S + +ED
Sbjct: 1641 NPL--LLKELN----LNDRQLQDTT--VKKL-SVLLQDKH--CKISTLTLNISNITEEDC 1689
Query: 394 KVIVDA-INEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIP 452
+ A I L LNL GN LG + I L E+ + L K + +E
Sbjct: 1690 AALTSAFILNPSNLKELNLSGNKLGNSGISKICPLL---ENKQCGLEKLRLSDCSISE-- 1744
Query: 453 DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT 512
+ + L + L+ + L+ELDL N G GV+ L +LL+ C A
Sbjct: 1745 EGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKL------------ 1792
Query: 513 GCKLLSKALHDCYESSKK-EG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVE 569
+ LS A D + K G +PL LK +L++ K L+ + + K + +
Sbjct: 1793 --RFLSSAADDVCQFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLT 1850
Query: 570 MPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLG 627
+ + I AL+ AF N NL+ LNL+ N + G + L +K L L+L
Sbjct: 1851 LNISNITEEDCAALTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLSLS 1910
Query: 628 DCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQ 686
DC + G ++A L N + L +++L N+ G +L + + K I
Sbjct: 1911 DCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTDLSQYRCKTLTIRFLSGS 1970
Query: 687 FGEEGVEEMEKLM 699
EE + K++
Sbjct: 1971 GAEEACAHLTKVV 1983
Score = 157 (60.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 93/355 (26%), Positives = 153/355 (43%)
Query: 334 NPLGPAVIELNHKGRMTDKPNDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDA 393
NPL + ELN + D+ D + +KKL S+ ++ K+S + +ED
Sbjct: 1297 NPL--LLKELN----LNDRQLQDTT--VKKL-SVLLQDKH--CKISTLTLNISNITEEDC 1345
Query: 394 KVIVDA-INEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIP 452
+ A I L LNL GN LG + I L E+ + L K + +E
Sbjct: 1346 AALTSAFILNPSNLKELNLSGNKLGNSGISKICPLL---ENKQCGLEKLRLSDCSISE-- 1400
Query: 453 DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT 512
+ + L + L+ + L+ELDL N G GV+ L +LL+ C A
Sbjct: 1401 EGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKL------------ 1448
Query: 513 GCKLLSKALHDCYESSKK-EG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVE 569
+ LS A D + K G +PL LK +L++ K L+ + + K + +
Sbjct: 1449 --RFLSSAADDVCQFVKGIVGKNPLLLKKLNLNDRQLQDTTVKKLSVLLQDKHCKISTLT 1506
Query: 570 MPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLG 627
+ + I L+ AF N NL+ LNL++N + G + L +K L L L
Sbjct: 1507 LNISNITEEDCAVLTSAFILNPSNLKELNLSENKLGNSGISKICPLLENKQCGLEKLRLS 1566
Query: 628 DCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 678
DC + G ++A L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1567 DCSISEEGYKALASALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1621
Score = 153 (58.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 89/342 (26%), Positives = 145/342 (42%)
Query: 346 KGRMTDKPNDDVSDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDA-INEVK 404
K + D+ D + +KKL S+ ++ K+S + +ED V+ A I
Sbjct: 1475 KLNLNDRQLQDTT--VKKL-SVLLQDKH--CKISTLTLNISNITEEDCAVLTSAFILNPS 1529
Query: 405 VLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQ 464
L LNL N LG + I L E+ + L K + +E + + L + L+
Sbjct: 1530 NLKELNLSENKLGNSGISKICPLL---ENKQCGLEKLRLSDCSISE--EGYKALASALKS 1584
Query: 465 AGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDC 524
+ L+ELDL N G GV+ L +LL+ C A L S A H C
Sbjct: 1585 NPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLRF-------------LSSAADHVC 1631
Query: 525 YESSKKEG-SPLALKVFIAGRNRLENEGAKMLAAVFK-KLKTLERVEMPQNGIYHVGITA 582
G +PL LK +L++ K L+ + + K + + + + I A
Sbjct: 1632 QFVKGIVGKNPLLLKELNLNDRQLQDTTVKKLSVLLQDKHCKISTLTLNISNITEEDCAA 1691
Query: 583 LSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIA 640
L+ AF N NL+ LNL+ N + G + L +K L L L DC + G ++A
Sbjct: 1692 LTSAFILNPSNLKELNLSGNKLGNSGISKICPLLENKQCGLEKLRLSDCSISEEGYKALA 1751
Query: 641 KYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKN---KTKLK 678
L N + L +++L N+ G +L + +++ K KL+
Sbjct: 1752 SALKSNPSHLIELDLRGNDPGQSGVKELTELLQDPLCKAKLR 1793
Score = 39 (18.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 256 LSEAKLLPSLTE-SQLLA 272
LSE KL+P L E + LLA
Sbjct: 905 LSEHKLVPKLKELAPLLA 922
>UNIPROTKB|B0FPE9 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9544 "Macaca mulatta" [GO:0072559 "NLRP3 inflammasome
complex" evidence=ISS] GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0072559 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
eggNOG:NOG82860 HOGENOM:HOG000294064 CTD:114548 KO:K12800
OrthoDB:EOG4HX508 GO:GO:0050701 GO:GO:0032621 InterPro:IPR003590
SMART:SM00368 EMBL:EU344966 RefSeq:NP_001107823.1 UniGene:Mmu.12334
ProteinModelPortal:B0FPE9 STRING:B0FPE9 GeneID:701278
KEGG:mcc:701278 NextBio:19980797 Uniprot:B0FPE9
Length = 1035
Score = 184 (69.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 77/298 (25%), Positives = 129/298 (43%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L L+L N+LG + + + L + R LW GR + + + + +
Sbjct: 742 LTELDLSDNSLGDPGMRVLCETLQHPDCNIRRLW----LGRCG--LSHECCFDISLVLSS 795
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
+LVELDLSDNA G G+ L L+ C + C L S D
Sbjct: 796 NQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLKKLWLVSCCLTSACCQDL- 846
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALS 584
+S S ++++ G N L + G +L K + L+++ + +G+ +ALS
Sbjct: 847 -ASVLSTSRSLTRLYV-GENALGDAGVAILCEKAKNPQCNLQKLGLVNSGLTSACCSALS 904
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL 643
N+NL HL L NT+ KG L + L L +L L +C L S ++ L
Sbjct: 905 SVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPDCKLQVLELDNCNLTSHCCWDLSTLL 964
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLMK 700
T + +L ++L N++ G + + +K ++ L Q + +SE F E +E L +
Sbjct: 965 TSSQSLRKLSLGNNDLGDLGVMMFCEVLKQQSCLLQNLGLSEMYFNYETKSALETLQE 1022
>ZFIN|ZDB-GENE-061108-4 [details] [associations]
symbol:nod2 "nucleotide-binding oligomerization
domain containing 2" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
ZFIN:ZDB-GENE-061108-4 GO:GO:0042981 GO:GO:0042742 GO:GO:0005622
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00660000095240
CTD:64127 KO:K10165 EMBL:CU929130 IPI:IPI01023759
RefSeq:XP_697924.3 UniGene:Dr.93177 Ensembl:ENSDART00000148805
GeneID:777696 KEGG:dre:777696 NextBio:20924266 Bgee:F8W3K2
Uniprot:F8W3K2
Length = 980
Score = 182 (69.1 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 64/228 (28%), Positives = 111/228 (48%)
Query: 470 VELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSK 529
V L L +N+ G +GVE L L C + I KLL K + +C E+ +
Sbjct: 761 VGLQLDNNSVGDVGVEQLLPCL--PMCHSLYLRNNNISDEGIR--KLLEKGI-EC-ENFQ 814
Query: 530 KEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE 589
K +AL F N+L + + + + K + + + N I VG L++
Sbjct: 815 K----IAL--F---NNKLTDTCTQYFSCLLKSKQNFLALRLGNNNITSVGAEQLAEGLSY 865
Query: 590 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 649
N++L+ L L N + +GA L AL+ +L L+L D + SAGA ++AK++ N +L
Sbjct: 866 NQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLSLVDNGVGSAGACALAKFIRQNKSL 925
Query: 650 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 697
E++ L N I +G L++A+K T +K++ + N + E++ +
Sbjct: 926 EELWLNKNSICKEGVDCLIEALKMNTSVKKVWLRGNNLSPQEEEQLSQ 973
Score = 133 (51.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 40/167 (23%), Positives = 78/167 (46%)
Query: 534 PLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNL 593
P+ +++ N + +EG + L + + +++ + N + S + +N
Sbjct: 783 PMCHSLYLRNNN-ISDEGIRKLLEKGIECENFQKIALFNNKLTDTCTQYFSCLLKSKQNF 841
Query: 594 RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVN 653
L L +N IT GA L + LS SL L L + GA +A LT++ TL ++
Sbjct: 842 LALRLGNNNITSVGAEQLAEGLSYNQSLQFLGLWGNKVGDRGAEVLADALTNSKTLIWLS 901
Query: 654 LTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
L N + G L K ++ L+++ +++N +EGV+ + + +K
Sbjct: 902 LVDNGVGSAGACALAKFIRQNKSLEELWLNKNSICKEGVDCLIEALK 948
>RGD|1562269 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10116 "Rattus norvegicus" [GO:0002606
"positive regulation of dendritic cell antigen processing and
presentation" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0016045 "detection of bacterium"
evidence=IEA;ISO] [GO:0016323 "basolateral plasma membrane"
evidence=IEA;ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA;ISO] [GO:0032760 "positive regulation of
tumor necrosis factor production" evidence=IEA;ISO] [GO:0032874
"positive regulation of stress-activated MAPK cascade"
evidence=ISO] [GO:0035556 "intracellular signal transduction"
evidence=IEA;ISO] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA;ISO] [GO:0042742 "defense response to bacterium"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA;ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050700 "CARD domain binding"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA;ISO] InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
RGD:1562269 GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 CTD:10392
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CH474011 IPI:IPI00209456
RefSeq:NP_001102706.1 UniGene:Rn.53929 Ensembl:ENSRNOT00000014324
GeneID:500133 KEGG:rno:500133 UCSC:RGD:1562269 NextBio:705213
Uniprot:D4ADT7
Length = 953
Score = 178 (67.7 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 64/278 (23%), Positives = 120/278 (43%)
Query: 435 KRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVEL-------DLSDNAFGPIGVEGL 487
++ALW +F +++ + R +G Q A L + G + G+
Sbjct: 617 RKALWAHLFAS-LRSYLKSLPRVQSDGFNQVHAMPTFLWMLRCIYETQSQKVGRLAARGI 675
Query: 488 -ADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL--HDCYESSKKEGSPL--ALKVFIA 542
AD L+ + C A + L+ L ++ + +E P L V
Sbjct: 676 SADYLKLAFCNACSADCSALSFVLHHFHRQLALDLDNNNLNDYGVRELQPCFSRLTVIRL 735
Query: 543 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
N++ + G K+L K K + + + N I +G ++ +E + L HL L N
Sbjct: 736 SVNQITDMGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLTHLKLGKNR 795
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
IT +G + QA+ S+ + + + GA + A+ L D+ +L ++L N IS +
Sbjct: 796 ITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAKAFAEALRDHPSLTTLSLAFNGISPE 855
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
GG L +A+K T L I +++N+ +E E ++++
Sbjct: 856 GGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAEMLR 893
Score = 158 (60.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 67/243 (27%), Positives = 111/243 (45%)
Query: 462 LQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 521
LQ +RL + LS N +GV+ L + L + I G + +++ L
Sbjct: 723 LQPCFSRLTVIRLSVNQITDMGVKVLCEEL-TKYKIVTFLGLYNNQITDI-GARYVAQIL 780
Query: 522 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 581
+C + LK+ G+NR+ +EG + +A K ++ V M N I G
Sbjct: 781 DECRGLTH-------LKL---GKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQIGDEGAK 830
Query: 582 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 641
A ++A ++ +L L+L N I+ +G L QAL + +L I+ L L A A+
Sbjct: 831 AFAEALRDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTIIWLTKNELNDEAAECFAE 890
Query: 642 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLM 699
L N TL+ + L N I+ +G L +A++ T + +I ++ N EE V E EK +
Sbjct: 891 MLRVNQTLKHLWLIQNHITAEGTAQLARALQKNTTITEICLNGNLIKPEEAKVFENEKRI 950
Query: 700 KSF 702
F
Sbjct: 951 ICF 953
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 568 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 627
+++ N + G+ L F L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVRELQPCFSR---LTVIRLSVNQITDMGVKVLCEELTKYKIVTFLGLY 764
Query: 628 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 687
+ + GA +A+ L + L + L N I+ +GG + +A+KN T + ++ + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLTHLKLGKNRITSEGGRCVAQAVKNSTSIVEVGMWGNQI 824
Query: 688 GEEGVEEMEKLMKSFGMAAALVL 710
G+EG + + ++ L L
Sbjct: 825 GDEGAKAFAEALRDHPSLTTLSL 847
>WB|WBGene00008876 [details] [associations]
symbol:F16A11.1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00530000063442 HOGENOM:HOG000261619 OMA:NINAMLN
EMBL:Z81505 GeneID:172764 KEGG:cel:CELE_F16A11.1 CTD:172764
NextBio:876917 PIR:T21007 RefSeq:NP_492499.1
ProteinModelPortal:P90839 SMR:P90839 STRING:P90839 PRIDE:P90839
EnsemblMetazoa:F16A11.1a UCSC:F16A11.1 WormBase:F16A11.1a
InParanoid:P90839 ArrayExpress:P90839 Uniprot:P90839
Length = 673
Score = 139 (54.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 278 DEKKTLVIKV--PISGFLNGEVETFVPPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNP 335
D+ K L+I+ I +N E E PP+ LLKL+ IAD+E+GW V+ +++ IP ++P
Sbjct: 110 DDIKELIIETLEVIRTLVNNEQE---PPQSLLKLNFIADEEKGWTMVVRALIYTIPENDP 166
Query: 336 LGPAVIEL 343
LGPAVI L
Sbjct: 167 LGPAVISL 174
Score = 86 (35.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 935 DTVIRLCKMFDLSKESSTKGRRTPCQQCNMCIILGLLAEKLAGPSSVAMLTQGTLEYLV 993
++V L LS E P NMCI+LG LAEK+AG ++V M YL+
Sbjct: 185 ESVQTLLLSLGLSSEFVDSKHLPPSWHKNMCIVLGSLAEKMAGSAAVTMFNDKIKGYLM 243
>UNIPROTKB|E2R9L3 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050830
"defense response to Gram-positive bacterium" evidence=IEA]
[GO:0050700 "CARD domain binding" evidence=IEA] [GO:0046330
"positive regulation of JNK cascade" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042228 "interleukin-8 biosynthetic process"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IEA] [GO:0032755 "positive regulation
of interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 SMART:SM00114
GO:GO:0005737 GO:GO:0016045 GO:GO:0006917 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0016323 GO:GO:0032755 GO:GO:0006919 GO:GO:0051092
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:AAEX03009404
Ensembl:ENSCAFT00000004933 NextBio:20856994 Uniprot:E2R9L3
Length = 964
Score = 175 (66.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 43/156 (27%), Positives = 81/156 (51%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N++ + G K+L K K L + + N I VG ++ +E K L HL L +N IT
Sbjct: 749 NQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYVARILDECKGLTHLKLGENKIT 808
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+G L A+ S+ + + + GA + A+ L ++ +L +++L N IS +GG
Sbjct: 809 SEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGG 868
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
L +A++ T L+ +++N+ +E E + +++K
Sbjct: 869 KSLAQALQRNTSLRIFWLTKNELDDEVAESLAEMLK 904
Score = 151 (58.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/161 (26%), Positives = 82/161 (50%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N++ + GA+ +A + + K L +++ +N I G L+ A + ++ + + N I
Sbjct: 777 NQITDVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIG 836
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+GA +AL PSL L+L + + G S+A+ L NT+L LT NE+ +
Sbjct: 837 DEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVA 896
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 704
L + +K LK + + +NQ +G+ ++ + L K+ G+
Sbjct: 897 ESLAEMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTGI 937
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 44/182 (24%), Positives = 80/182 (43%)
Query: 525 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 579
YE+ ++ LA K A +L + L+ V + +++ N + G
Sbjct: 671 YETQSEKVGRLAAKGICANYLKLTYCNACSADCSALSFVLHHFRKRLALDLDNNNLNDYG 730
Query: 580 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 639
+ L F L L L+ N IT G L + L+K L L L + GA +
Sbjct: 731 VRELQPCFSR---LTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQITDVGARYV 787
Query: 640 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
A+ L + L + L N+I+ +GG L A++N + + +I + N+ G+EG + + +
Sbjct: 788 ARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGAKAFAEAL 847
Query: 700 KS 701
++
Sbjct: 848 RN 849
>RGD|1308314 [details] [associations]
symbol:Nlrp3 "NLR family, pyrin domain containing 3"
species:10116 "Rattus norvegicus" [GO:0002674 "negative regulation
of acute inflammatory response" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA;ISO] [GO:0032621 "interleukin-18 production"
evidence=IEA;ISO] [GO:0042347 "negative regulation of NF-kappaB
import into nucleus" evidence=IEA;ISO] [GO:0043280 "positive
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0050701 "interleukin-1
secretion" evidence=IEA;ISO] [GO:0050713 "negative regulation of
interleukin-1 beta secretion" evidence=ISO] [GO:0050718 "positive
regulation of interleukin-1 beta secretion" evidence=IEA;ISO]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=ISO] [GO:0072559 "NLRP3
inflammasome complex" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:1308314 GO:GO:0005524 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
GeneTree:ENSGT00700000104141 OrthoDB:EOG4HX508 GO:GO:0050701
GO:GO:0032621 InterPro:IPR003590 SMART:SM00368 OMA:VNCCLTS
IPI:IPI00198971 Ensembl:ENSRNOT00000004280 UCSC:RGD:1308314
ArrayExpress:D4A523 Uniprot:D4A523
Length = 1033
Score = 175 (66.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 76/298 (25%), Positives = 126/298 (42%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L L+L NTLG + + +AL + LW GR + + + + +
Sbjct: 740 LTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLW----LGRCG--LTHQCCFNISSVLSS 793
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
+LVELDLSDNA G GV L L+ C + C L S C
Sbjct: 794 SQKLVELDLSDNALGDFGVRLLCVGLKHLLC--------NLQKLWLVSCCLTSAC---CQ 842
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALS 584
+ + S +L G N L + G ++L K + L+++ + +G+ + +AL+
Sbjct: 843 DLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSGLTSLCCSALT 902
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL 643
+ N+NL HL L N + G L + L L +L L +C L S ++ L
Sbjct: 903 SVLKTNQNLTHLYLRSNALGDMGLKLLCEGLLHPDCKLQMLELDNCSLTSHSCWDLSTIL 962
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGVEEMEKLMK 700
T N +L +NL+ N++ + L + +K + L Q + + E E +E L +
Sbjct: 963 THNQSLRKLNLSNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNCETKRTLEALQE 1020
>MGI|MGI:1341839 [details] [associations]
symbol:Nod1 "nucleotide-binding oligomerization domain
containing 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO;RCA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006952 "defense response" evidence=RCA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016045 "detection of bacterium" evidence=ISO]
[GO:0016323 "basolateral plasma membrane" evidence=ISO] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IGI;IMP]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IGI;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=IDA] [GO:0035556
"intracellular signal transduction" evidence=ISO] [GO:0042228
"interleukin-8 biosynthetic process" evidence=ISO] [GO:0042742
"defense response to bacterium" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043123 "positive regulation
of I-kappaB kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0045087
"innate immune response" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IDA] [GO:0050700 "CARD domain
binding" evidence=ISO] [GO:0050830 "defense response to
Gram-positive bacterium" evidence=IGI;IMP] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IDA] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 MGI:MGI:1341839 GO:GO:0005524 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0016324 GO:GO:0043123 GO:GO:0070374 GO:GO:0046330
GO:GO:0045087 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 eggNOG:NOG275503 HOGENOM:HOG000113813 HOVERGEN:HBG050793
KO:K08727 OMA:NDYGVRE OrthoDB:EOG4WH8K2 GO:GO:0042228 EMBL:AK082663
EMBL:AK089662 EMBL:BC042670 EMBL:BC043670 IPI:IPI00221820
RefSeq:NP_001164478.1 RefSeq:NP_766317.1 UniGene:Mm.28498
ProteinModelPortal:Q8BHB0 SMR:Q8BHB0 DIP:DIP-59535N STRING:Q8BHB0
PhosphoSite:Q8BHB0 PaxDb:Q8BHB0 PRIDE:Q8BHB0
Ensembl:ENSMUST00000060655 Ensembl:ENSMUST00000168172 GeneID:107607
KEGG:mmu:107607 GeneTree:ENSGT00660000095240 InParanoid:Q8BHB0
NextBio:359142 Bgee:Q8BHB0 Genevestigator:Q8BHB0
GermOnline:ENSMUSG00000038058 Uniprot:Q8BHB0
Length = 953
Score = 174 (66.3 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 63/278 (22%), Positives = 119/278 (42%)
Query: 435 KRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVEL-------DLSDNAFGPIGVEGL 487
++ALW +F +++ + R G Q A L + G + G+
Sbjct: 617 RKALWAHLFAS-LRSYLKSLPRVQSGGFNQVHAMPTFLWMLRCIYETQSQKVGRLAARGI 675
Query: 488 -ADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL--HDCYESSKKEGSPL--ALKVFIA 542
AD L+ + C A + L+ L ++ + +E P L V
Sbjct: 676 SADYLKLAFCNACSADCSALSFVLHHFHRQLALDLDNNNLNDYGVQELQPCFSRLTVIRL 735
Query: 543 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
N++ + G K+L K K + + + N I +G ++ +E + L+HL L N
Sbjct: 736 SVNQITDTGVKVLCEELTKYKIVTFLGLYNNQITDIGARYVAQILDECRGLKHLKLGKNR 795
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
IT +G + A+ S+ + + + GA + A+ L D+ +L ++L N IS +
Sbjct: 796 ITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAKAFAEALKDHPSLTTLSLAFNGISPE 855
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
GG L +A+K T L I +++N+ +E E ++++
Sbjct: 856 GGKSLAQALKQNTTLTVIWLTKNELNDESAECFAEMLR 893
Score = 159 (61.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 68/243 (27%), Positives = 109/243 (44%)
Query: 462 LQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL 521
LQ +RL + LS N GV+ L + L + I G + +++ L
Sbjct: 723 LQPCFSRLTVIRLSVNQITDTGVKVLCEEL-TKYKIVTFLGLYNNQITDI-GARYVAQIL 780
Query: 522 HDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 581
+C G LK G+NR+ +EG K +A K ++ V M N I G
Sbjct: 781 DEC------RG----LKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQIGDEGAK 830
Query: 582 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 641
A ++A +++ +L L+L N I+ +G L QAL + +L ++ L L A A+
Sbjct: 831 AFAEALKDHPSLTTLSLAFNGISPEGGKSLAQALKQNTTLTVIWLTKNELNDESAECFAE 890
Query: 642 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLM 699
L N TL + L N I+ +G L +A++ T + +I ++ N EE V E EK +
Sbjct: 891 MLRVNQTLRHLWLIQNRITAKGTAQLARALQKNTAITEICLNGNLIKPEEAKVFENEKRI 950
Query: 700 KSF 702
F
Sbjct: 951 ICF 953
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 37/143 (25%), Positives = 65/143 (45%)
Query: 568 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 627
+++ N + G+ L F L + L+ N IT G L + L+K + L L
Sbjct: 708 LDLDNNNLNDYGVQELQPCFSR---LTVIRLSVNQITDTGVKVLCEELTKYKIVTFLGLY 764
Query: 628 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 687
+ + GA +A+ L + L+ + L N I+ +GG + A+KN T + + + NQ
Sbjct: 765 NNQITDIGARYVAQILDECRGLKHLKLGKNRITSEGGKCVALAVKNSTSIVDVGMWGNQI 824
Query: 688 GEEGVEEMEKLMKSFGMAAALVL 710
G+EG + + +K L L
Sbjct: 825 GDEGAKAFAEALKDHPSLTTLSL 847
>MGI|MGI:2653833 [details] [associations]
symbol:Nlrp3 "NLR family, pyrin domain containing 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002674 "negative regulation of acute
inflammatory response" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=ISO]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0032621 "interleukin-18 production"
evidence=IMP] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=ISO] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0050701 "interleukin-1 secretion" evidence=IMP]
[GO:0050713 "negative regulation of interleukin-1 beta secretion"
evidence=ISO] [GO:0050718 "positive regulation of interleukin-1
beta secretion" evidence=ISO] [GO:0050728 "negative regulation of
inflammatory response" evidence=ISO] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISO] [GO:0051607 "defense response to virus" evidence=IMP]
[GO:0071222 "cellular response to lipopolysaccharide" evidence=ISO]
[GO:0072559 "NLRP3 inflammasome complex" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2653833 GO:GO:0005829
GO:GO:0005524 GO:GO:0050728 GO:GO:0006954 GO:GO:0051607
GO:GO:0006919 Reactome:REACT_107772 GO:GO:0032088 GO:GO:0050718
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 GO:GO:0072559
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347 EMBL:AL592522
eggNOG:NOG82860 GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 CTD:114548 KO:K12800 OrthoDB:EOG4HX508
GO:GO:0050701 GO:GO:0032621 InterPro:IPR003590 SMART:SM00368
EMBL:AF486632 EMBL:AY495376 EMBL:AY495377 EMBL:AY337285
EMBL:AY337292 EMBL:AY337286 EMBL:AY337287 EMBL:AY337288
EMBL:AY337289 EMBL:AY337290 EMBL:AY337291 EMBL:AY337299
EMBL:AY337293 EMBL:AY337294 EMBL:AY337295 EMBL:AY337296
EMBL:AY337297 EMBL:AY337298 EMBL:AY337306 EMBL:AY337300
EMBL:AY337301 EMBL:AY337302 EMBL:AY337303 EMBL:AY337304
EMBL:AY337305 EMBL:AY355340 EMBL:BC116174 EMBL:BC116175
IPI:IPI00153873 IPI:IPI00620168 IPI:IPI00620897 IPI:IPI00621784
RefSeq:NP_665826.1 UniGene:Mm.54174 ProteinModelPortal:Q8R4B8
SMR:Q8R4B8 STRING:Q8R4B8 PhosphoSite:Q8R4B8 PRIDE:Q8R4B8
Ensembl:ENSMUST00000079476 Ensembl:ENSMUST00000101148 GeneID:216799
KEGG:mmu:216799 UCSC:uc007jeh.1 InParanoid:Q8R4B8 OMA:VNCCLTS
NextBio:375328 Bgee:Q8R4B8 CleanEx:MM_NLRP3 Genevestigator:Q8R4B8
GermOnline:ENSMUSG00000032691 Uniprot:Q8R4B8
Length = 1033
Score = 173 (66.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 74/308 (24%), Positives = 130/308 (42%)
Query: 396 IVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDAL 455
+ +++ + L L+L NTLG + + +AL + LW GR +
Sbjct: 730 LFSSLSTNRSLTELDLSDNTLGDPGMRVLCEALQHPGCNIQRLW----LGRCG--LSHQC 783
Query: 456 RYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCK 515
+ + + + +LVELDLSDNA G G+ L L+ C + C
Sbjct: 784 CFDISSVLSSSQKLVELDLSDNALGDFGIRLLCVGLKHLLC--------NLQKLWLVSCC 835
Query: 516 LLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNG 574
L S C + + S +L G N L + G ++L K + L+++ + +G
Sbjct: 836 LTSAC---CQDLALVLSSNHSLTRLYIGENALGDSGVQVLCEKMKDPQCNLQKLGLVNSG 892
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKS 633
+ + +AL+ + N+N HL L N + G L + L L +L L +C L S
Sbjct: 893 LTSICCSALTSVLKTNQNFTHLYLRSNALGDTGLRLLCEGLLHPDCKLQMLELDNCSLTS 952
Query: 634 AGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ-INVSENQFGEEGV 692
+++ LT N +L +NL N++ + L + +K + L Q + + E E
Sbjct: 953 HSCWNLSTILTHNHSLRKLNLGNNDLGDLCVVTLCEVLKQQGCLLQSLQLGEMYLNRETK 1012
Query: 693 EEMEKLMK 700
+E L +
Sbjct: 1013 RALEALQE 1020
>UNIPROTKB|A6QLE5 [details] [associations]
symbol:NLRP3 "NACHT, LRR and PYD domains-containing protein
3" species:9913 "Bos taurus" [GO:0072559 "NLRP3 inflammasome
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050701
"interleukin-1 secretion" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0032621 "interleukin-18 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] GO:GO:0005524 GO:GO:0005737 GO:GO:0050728
GO:GO:0006954 GO:GO:0051607 GO:GO:0006919 GO:GO:0032088
GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
GO:GO:0072559 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0042347
eggNOG:NOG82860 GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
EMBL:BC147936 IPI:IPI00708191 RefSeq:NP_001095689.1
UniGene:Bt.61644 ProteinModelPortal:A6QLE5 STRING:A6QLE5
PRIDE:A6QLE5 Ensembl:ENSBTAT00000001675 GeneID:538639
KEGG:bta:538639 CTD:114548 InParanoid:A6QLE5 KO:K12800 OMA:SSHCCWD
OrthoDB:EOG4HX508 NextBio:20877489 GO:GO:0050701 GO:GO:0032621
InterPro:IPR003590 SMART:SM00368 Uniprot:A6QLE5
Length = 1031
Score = 169 (64.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 76/298 (25%), Positives = 121/298 (40%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L LNL GNTLG + + L + R LW G+ + +
Sbjct: 738 LTELNLSGNTLGDPGMNVLCETLQQPGCNIRRLW----LGQCCLSHQCCFNI--SSVLSN 791
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
+LVELDLS NA G G+ L LR C + C L S + D
Sbjct: 792 NQKLVELDLSHNALGDFGIRLLCVGLRHLFC--------NLKKLWLVSCCLTSASCEDL- 842
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALS 584
+S + ++++ G N L + G +L K L+++ + +G+ ALS
Sbjct: 843 -ASVLSTNHSLTRLYL-GENALGDSGVGILCEKVKNPHCNLQKLGLVNSGLTSGCCPALS 900
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYL 643
N+NL HL L N + G L + L + L +L L +C L S ++ L
Sbjct: 901 SVLSTNQNLTHLYLQGNALGDMGVKLLCEGLLHRNCKLQVLELDNCSLTSHCCWDLSTLL 960
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEKLMK 700
T N +L + L N++ G + L + +K + LK + + E F + +E L +
Sbjct: 961 TSNQSLRKLCLGNNDLGDLGVMLLCEVLKQQGCLLKSLRLCEMYFNYDTKRALETLQE 1018
>MGI|MGI:98640 [details] [associations]
symbol:Tcte1 "t-complex-associated testis expressed 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:98640
GeneTree:ENSGT00640000091171 UniGene:Mm.329064 EMBL:M28821
EMBL:BC145741 IPI:IPI01008396 PIR:A45841 PIR:A45878
RefSeq:NP_038716.2 ProteinModelPortal:A6H639 SMR:A6H639
STRING:A6H639 PhosphoSite:A6H639 PRIDE:A6H639
Ensembl:ENSMUST00000113547 GeneID:21645 KEGG:mmu:21645
UCSC:uc008cqt.1 CTD:202500 eggNOG:NOG258271 HOGENOM:HOG000007147
HOVERGEN:HBG056299 OMA:GSWKRMF ChiTaRS:TCTE1 NextBio:300902
Bgee:A6H639 Genevestigator:A6H639 Uniprot:A6H639
Length = 498
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/144 (31%), Positives = 72/144 (50%)
Query: 536 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 595
AL+ N + + GA+ A + + L + + N + G +L+ A N NL
Sbjct: 306 ALEELDLSHNLIGDRGARAAAKLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVF 364
Query: 596 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 655
LNL N I +G + AL L++L+LG L A+ +++ LT NTTL +NL+
Sbjct: 365 LNLRLNCIEDEGGQAIAHALETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLS 424
Query: 656 CNEISVQGGLDLVKAMK-NKTKLK 678
CN I GG L++ + NKT L+
Sbjct: 425 CNHIGQDGGKQLLEGISDNKTILE 448
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 523 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITA 582
DCY + + LK+F R++++++ A++L LE +++ N I G A
Sbjct: 265 DCYSLAATIKACHTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARA 324
Query: 583 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 642
+ ++ LR LNL +N + GA L AL+ +L LNL ++ G +IA
Sbjct: 325 AAKLLSHSR-LRVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHA 383
Query: 643 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 695
L N L ++L N++S L + + T L +N+S N G++G +++
Sbjct: 384 LETNKCLSVLHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQL 436
>UNIPROTKB|P10775 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR003590 SMART:SM00368 HOVERGEN:HBG001059 EMBL:M58700
PIR:A31857 UniGene:Ssc.6413 PDB:1DFJ PDB:2BNH PDBsum:1DFJ
PDBsum:2BNH ProteinModelPortal:P10775 SMR:P10775 IntAct:P10775
PRIDE:P10775 EvolutionaryTrace:P10775 Uniprot:P10775
Length = 456
Score = 163 (62.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/241 (27%), Positives = 115/241 (47%)
Query: 461 GLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKA 520
G+ + A L ELDL N G G+ L L S +GC+ L +
Sbjct: 216 GIVASQASLRELDLGSNGLGDAGIAELCPGLLSPAS-RLKTLWLWECDITASGCRDLCRV 274
Query: 521 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVG 579
L + + KE S +AG N+L +EGA++L ++ + LE + + +
Sbjct: 275 LQA--KETLKELS-------LAG-NKLGDEGARLLCESLLQPGCQLESLWVKSCSLTAAC 324
Query: 580 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKL-PSLAILNLGDCLLKSAGASS 638
+S +NK+L L L+ N + G L QALS+ +L +L LGDC + ++G SS
Sbjct: 325 CQHVSLMLTQNKHLLELQLSSNKLGDSGIQELCQALSQPGTTLRVLCLGDCEVTNSGCSS 384
Query: 639 IAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEMEK 697
+A L N +L +++L+ N + G L L+ +++ L+Q+ + + + EE + ++
Sbjct: 385 LASLLLANRSLRELDLSNNCVGDPGVLQLLGSLEQPGCALEQLVLYDTYWTEEVEDRLQA 444
Query: 698 L 698
L
Sbjct: 445 L 445
>UNIPROTKB|Q9Y239 [details] [associations]
symbol:NOD1 "Nucleotide-binding oligomerization
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IDA;TAS] [GO:0016323 "basolateral plasma
membrane" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA;TAS]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IDA;IPI] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IDA] [GO:0050700 "CARD
domain binding" evidence=IDA] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0035556 "intracellular signal
transduction" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0042834 "peptidoglycan binding" evidence=TAS]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0016045 "detection of
bacterium" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IDA] [GO:0042228 "interleukin-8 biosynthetic
process" evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0007254 "JNK cascade" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0034130
"toll-like receptor 1 signaling pathway" evidence=TAS] [GO:0034134
"toll-like receptor 2 signaling pathway" evidence=TAS] [GO:0034138
"toll-like receptor 3 signaling pathway" evidence=TAS] [GO:0034142
"toll-like receptor 4 signaling pathway" evidence=TAS] [GO:0035666
"TRIF-dependent toll-like receptor signaling pathway" evidence=TAS]
[GO:0035872 "nucleotide-binding domain, leucine rich repeat
containing receptor signaling pathway" evidence=TAS] [GO:0045087
"innate immune response" evidence=TAS] [GO:0051403
"stress-activated MAPK cascade" evidence=TAS] [GO:0070423
"nucleotide-binding oligomerization domain containing signaling
pathway" evidence=TAS] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=ISS]
Reactome:REACT_6782 InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209
GO:GO:0051259 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0007254
GO:GO:0016324 GO:GO:0043123 GO:GO:0042742 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0016323
GO:GO:0032755 GO:GO:0000187 GO:GO:0042802 GO:GO:0051092
GO:GO:0008656 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0042834 GO:GO:0032760 GO:GO:0002755 GO:GO:0008063
GO:GO:0034130 GO:GO:0034134 GO:GO:0034138 GO:GO:0034142
GO:GO:0035666 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0070423 GO:GO:0002606 EMBL:AF126484 EMBL:AF149774
EMBL:AF113925 EMBL:AC006027 EMBL:BC040339 IPI:IPI00005776
RefSeq:NP_006083.1 UniGene:Hs.405153 PDB:2B1W PDB:2DBD PDB:2NSN
PDB:2NZ7 PDB:4E9M PDBsum:2B1W PDBsum:2DBD PDBsum:2NSN PDBsum:2NZ7
PDBsum:4E9M ProteinModelPortal:Q9Y239 SMR:Q9Y239 DIP:DIP-41064N
IntAct:Q9Y239 MINT:MINT-90728 STRING:Q9Y239 PhosphoSite:Q9Y239
DMDM:20137579 PaxDb:Q9Y239 PRIDE:Q9Y239 Ensembl:ENST00000222823
GeneID:10392 KEGG:hsa:10392 UCSC:uc003tav.3 CTD:10392
GeneCards:GC07M030464 HGNC:HGNC:16390 MIM:605980 neXtProt:NX_Q9Y239
PharmGKB:PA162398098 eggNOG:NOG275503 HOGENOM:HOG000113813
HOVERGEN:HBG050793 InParanoid:Q9Y239 KO:K08727 OMA:NDYGVRE
OrthoDB:EOG4WH8K2 PhylomeDB:Q9Y239 BindingDB:Q9Y239
ChEMBL:CHEMBL1293222 EvolutionaryTrace:Q9Y239 GenomeRNAi:10392
NextBio:39370 ArrayExpress:Q9Y239 Bgee:Q9Y239 CleanEx:HS_NOD1
Genevestigator:Q9Y239 GermOnline:ENSG00000106100 GO:GO:0042228
Uniprot:Q9Y239
Length = 953
Score = 180 (68.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 83/287 (28%), Positives = 127/287 (44%)
Query: 419 NAAKAIADALS-KHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDN 477
NA A ALS HF + L D+ + Y LQ +RL L LS N
Sbjct: 686 NACSADCSALSFVLHHFPKRLALDLDNNNLND-------YGVRELQPCFSRLTVLRLSVN 738
Query: 478 AFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLAL 537
GV+ L++ L G + ++K L +C +G L
Sbjct: 739 QITDGGVKVLSEELTKYKIVTYLGLYNNQITD--VGARYVTKILDEC------KGLT-HL 789
Query: 538 KVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLN 597
K+ G+N++ +EG K LA K K++ V M N + G A ++A + +L L+
Sbjct: 790 KL---GKNKITSEGGKYLALAVKNSKSISEVGMWGNQVGDEGAKAFAEALRNHPSLTTLS 846
Query: 598 LNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCN 657
L N I+ +G L +AL + SL IL L L A S+A+ L N TL+ + L N
Sbjct: 847 LASNGISTEGGKSLARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQN 906
Query: 658 EISVQGGLDLVKAMKNKTKLKQINVSENQFG-EEG-VEEMEKLMKSF 702
+I+ +G L A+++ T + +I ++ N EE V E EK + F
Sbjct: 907 QITAKGTAQLADALQSNTGITEICLNGNLIKPEEAKVYEDEKRIICF 953
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 215 NSDKLSTVTNALLVHLGLIKCEDKSFKINY 244
N+D +S T L HLG D F + Y
Sbjct: 122 NTDPVSRYTQQLRHHLG----RDSKFVLCY 147
>UNIPROTKB|E1B7V7 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 CTD:10392 KO:K08727 OMA:NDYGVRE
GO:GO:0042228 GeneTree:ENSGT00660000095240 EMBL:DAAA02010901
IPI:IPI00924206 RefSeq:NP_001243492.1 UniGene:Bt.106142
UniGene:Bt.42716 UniGene:Bt.89027 ProteinModelPortal:E1B7V7
PRIDE:E1B7V7 Ensembl:ENSBTAT00000061183 GeneID:781426
KEGG:bta:781426 NextBio:20924824 Uniprot:E1B7V7
Length = 954
Score = 166 (63.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 65/279 (23%), Positives = 119/279 (42%)
Query: 435 KRALWKDMFTGRMKTEIPDALRYLGNGLQQAGA--------RLVELDLSDNAFGPIGVEG 486
++ALW +F +++ + R G Q A R + S+ G + G
Sbjct: 618 RKALWTHLFAS-LRSHLKSLPRVQSGGFNQVQALPTFIWMLRCIYETQSEKV-GQLAARG 675
Query: 487 L-ADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKAL--HDCYESSKKEGSPL--ALKVFI 541
+ A+ L+ + C A K L+ L ++ + +E P L V
Sbjct: 676 ICANYLKLTFCNACSADCSALSFVLHHLRKRLALDLDNNNLNDFGVRELQPCFSRLTVIR 735
Query: 542 AGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 601
N++ + G K+L K K L + + N I VG ++ +E K L HL L N
Sbjct: 736 LSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKN 795
Query: 602 TITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 661
IT +G L A+ S+ + + + GA + A+ L ++ +L +++L N IS
Sbjct: 796 KITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGIST 855
Query: 662 QGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+GG L A++ L+ +++N+ +E E +++K
Sbjct: 856 EGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLK 894
Score = 157 (60.3 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/154 (31%), Positives = 77/154 (50%)
Query: 543 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
G+N++ +EG K LA K K++ V M N I G A ++A + +L +L+L N
Sbjct: 793 GKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNG 852
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
I+ +G L AL + SL I L L A S A+ L N TL+ + L N+I+ +
Sbjct: 853 ISTEGGKSLAWALQQNASLRIFWLTKNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAK 912
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 696
G L +A++ T + +I ++ N E + E
Sbjct: 913 GIAQLAEALQKNTGIMEICLNGNLIKPEEAKVFE 946
Score = 148 (57.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 43/161 (26%), Positives = 82/161 (50%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N++ + GA+ +A + + K L +++ +N I G +L+ A + +K++ + + N I
Sbjct: 767 NQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIG 826
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+GA +AL PSL L+L + + G S+A L N +L LT NE+ +
Sbjct: 827 DEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLTKNELDDEVA 886
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEM-EKLMKSFGM 704
+ +K LK + + +NQ +G+ ++ E L K+ G+
Sbjct: 887 ESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGI 927
Score = 136 (52.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 45/182 (24%), Positives = 81/182 (44%)
Query: 525 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 579
YE+ ++ LA + A +L + L+ V L+ +++ N + G
Sbjct: 661 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHLRKRLALDLDNNNLNDFG 720
Query: 580 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 639
+ L F L + L+ N IT G L + L+K L L L + + GA I
Sbjct: 721 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYI 777
Query: 640 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
A+ L + L + L N+I+ +GG L A+KN + ++ + NQ G+EG + + +
Sbjct: 778 ARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFEVGMWGNQIGDEGAKAFAEAL 837
Query: 700 KS 701
++
Sbjct: 838 RN 839
>RGD|621398 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0045765
"regulation of angiogenesis" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:621398 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634 OrthoDB:EOG4DZ1VG
EMBL:X62528 EMBL:BC070501 IPI:IPI00959348 PIR:S20597
RefSeq:NP_001257691.1 RefSeq:NP_001257692.1 RefSeq:NP_620805.2
UniGene:Rn.3756 ProteinModelPortal:P29315 SMR:P29315 IntAct:P29315
STRING:P29315 PhosphoSite:P29315 PRIDE:P29315 GeneID:100360501
KEGG:rno:100360501 eggNOG:NOG299368 InParanoid:P29315
NextBio:623232 ArrayExpress:P29315 Genevestigator:P29315
GermOnline:ENSRNOG00000016416 Uniprot:P29315
Length = 456
Score = 160 (61.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 467 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
A L ELDL N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE--GCKDLCRVLRA-- 277
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 584
+ S KE S +AG N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKELS-------LAG-NELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 643
+N++L L ++ N + G + L +AL + L +L LGDC + +G SS+A L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
N +L +++L+ N + G L L++++K + + Q V + + + VE+ + ++
Sbjct: 390 LANRSLRELDLSNNCMGDNGVLQLLESLKQPSCILQQLVLYDIYWTDEVEDQLRALE 446
>RGD|2321956 [details] [associations]
symbol:LOC100360501 "ribonuclease inhibitor-like" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IEA]
[GO:0032311 "angiogenin-PRI complex" evidence=IEA] [GO:0045765
"regulation of angiogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 RGD:2321956 GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 EMBL:AC118351 EMBL:CH473953
InterPro:IPR003590 SMART:SM00368 KO:K16634 OMA:MEDRLQA
GeneTree:ENSGT00670000097902 RefSeq:NP_001257692.1
RefSeq:NP_620805.2 UniGene:Rn.3756 GeneID:100360501
KEGG:rno:100360501 EMBL:AB296102 IPI:IPI00959820
Ensembl:ENSRNOT00000022241 Uniprot:E2RUH2
Length = 456
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 64/236 (27%), Positives = 111/236 (47%)
Query: 467 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
A L ELDL N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLGSNKLGNTGIAALCSGLLLPSCRLRTLWLWDCDVTAE--GCKDLCRVLRA-- 277
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 584
+ S KE S +AG N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKELS-------LAG-NELKDEGAQLLCESLLEPGCQLESLWVKTCSLTAASCPHFC 329
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 643
+N++L L ++ N + G + L +AL + L +L LGDC + +G SS+A L
Sbjct: 330 SVLTKNRSLFELQMSSNPLGDSGVVELCKALGYPDTVLRVLWLGDCDVTDSGCSSLATVL 389
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 698
N +L +++L+ N + G L L++++K + L+Q+ + + + +E +++ L
Sbjct: 390 LANRSLRELDLSNNCMGDTGVLQLLESLKQPSCALQQLVLYDIYWTDEVEDQLRAL 445
>TAIR|locus:2194604 [details] [associations]
symbol:emb2004 "embryo defective 2004" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009941 eggNOG:NOG69209 EMBL:AY056236
EMBL:AY091215 IPI:IPI00540032 RefSeq:NP_563871.1 UniGene:At.26354
ProteinModelPortal:Q93ZV8 SMR:Q93ZV8 IntAct:Q93ZV8 PaxDb:Q93ZV8
PRIDE:Q93ZV8 EnsemblPlants:AT1G10510.1 GeneID:837591
KEGG:ath:AT1G10510 TAIR:At1g10510 HOGENOM:HOG000264659
InParanoid:Q93ZV8 OMA:NNMIDYS PhylomeDB:Q93ZV8
ProtClustDB:CLSN2687758 ArrayExpress:Q93ZV8 Genevestigator:Q93ZV8
Uniprot:Q93ZV8
Length = 605
Score = 160 (61.4 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 48/173 (27%), Positives = 85/173 (49%)
Query: 533 SPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN 592
S + LK+ N + +EGAK L A + ++E +++ I G +++ + N
Sbjct: 224 SNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNST 283
Query: 593 LRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 652
LR + LN+N I Y G L AL + ++ L+L + GA+++AK L N +L ++
Sbjct: 284 LRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLREL 343
Query: 653 NLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG---VEEMEKLMKS 701
+L N I +G L+ + + K K+ +++ N +G V E K KS
Sbjct: 344 HLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRSKS 396
Score = 158 (60.7 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 48/159 (30%), Positives = 72/159 (45%)
Query: 539 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 598
V ++G N +EG LA +T+E V NGI G+ A + N L+ LNL
Sbjct: 175 VDMSGCN-FGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKILNL 233
Query: 599 NDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNE 658
+ N I +GA L L + S+ IL L + GA IA+ L N+TL + L N
Sbjct: 234 SGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNNNM 293
Query: 659 ISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEK 697
I G L A+ ++ ++++ N G G + K
Sbjct: 294 IDYSGFTSLAGALLENNTIRNLHLNGNYGGALGANALAK 332
Score = 154 (59.3 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 42/177 (23%), Positives = 91/177 (51%)
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 585
E K+ S + L +++ N + +EGA+ +A K+ +++ +++ N I+ G+ A++
Sbjct: 389 EYIKRSKSLVWLNLYM---NDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQ 445
Query: 586 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD 645
A ++N + L + N I GA L + L ++ L LG C + + GA +A L
Sbjct: 446 ALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADMLRY 505
Query: 646 NTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQFGEEGVEEMEKLMKS 701
N T+ ++L N + +G L +++K + L +++ N+ ++G + + +K+
Sbjct: 506 NNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDLGFNEIRDDGAFAIAQALKA 562
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 551 GAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTITYKGAI 609
GA LA + K+L + + N I G AL +K + L+L +N+I+ KGA
Sbjct: 326 GANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAF 385
Query: 610 PLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVK 669
+ + + + SL LNL + GA IA L N ++ ++L N I +G + +
Sbjct: 386 YVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQ 445
Query: 670 AMKNKTKLKQINVSENQFGEEGVEEMEKLMKSFGMAAALVL 710
A+K+ + + V N G +G + + +++K G L L
Sbjct: 446 ALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKL 486
Score = 145 (56.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 43/167 (25%), Positives = 75/167 (44%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N + G K V + L+ + + N I G L EN ++ L LN I
Sbjct: 208 NGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIG 267
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+GA + + L + +L I+ L + ++ +G +S+A L +N T+ +++L N G
Sbjct: 268 DEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYGGALGA 327
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEE-MEKLMKSFGMAAALVL 710
L K ++ L+++++ N G+EG M L G A L L
Sbjct: 328 NALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDL 374
Score = 134 (52.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/171 (23%), Positives = 83/171 (48%)
Query: 531 EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEE 589
EG+ ++ + G N + +EG + L A K + +++ N I G +++ +
Sbjct: 335 EGNKSLRELHLHG-NSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKR 393
Query: 590 NKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTL 649
+K+L LNL N I +GA + +L + S+A ++LG + + G ++IA+ L DN +
Sbjct: 394 SKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNAIAQALKDNAII 453
Query: 650 EDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+ + N I G L + +K +K + + Q +G E + +++
Sbjct: 454 TTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAKGAEHVADMLR 504
Score = 124 (48.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 32/158 (20%), Positives = 76/158 (48%)
Query: 543 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
G N + +GA +A K+ K+L + + N I G ++D+ ++N+++ ++L N
Sbjct: 375 GNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNN 434
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
I +G + QAL + L +G + GA ++++ L + ++ + L +I+ +
Sbjct: 435 IHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNVKTLKLGWCQIAAK 494
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
G + ++ + +++ N +EG + + +K
Sbjct: 495 GAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLK 532
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 32/146 (21%), Positives = 67/146 (45%)
Query: 546 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 605
+++ E + L K+L++ V+M G+ L+++ N+ + ++ + N IT
Sbjct: 153 KVDREAKQRLNEFAKELRSFRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITA 212
Query: 606 KGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 665
G L L ILNL + GA ++ L +N+++E + L +I +G
Sbjct: 213 AGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAK 272
Query: 666 DLVKAMKNKTKLKQINVSENQFGEEG 691
++ + +K + L+ I ++ N G
Sbjct: 273 EIAELLKRNSTLRIIELNNNMIDYSG 298
Score = 55 (24.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 396 IVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDAL 455
+ A+ E + +L+L GN G A A+A L ++ + G +
Sbjct: 302 LAGALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIG------DEGT 355
Query: 456 RYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSS 494
R L GL ++ LDL +N+ G +A+ ++ S
Sbjct: 356 RALMAGLSSHKGKVALLDLGNNSISAKGAFYVAEYIKRS 394
>MGI|MGI:1924108 [details] [associations]
symbol:Nlrp14 "NLR family, pyrin domain containing 14"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
MGI:MGI:1924108 GO:GO:0007275 GO:GO:0005524 GO:GO:0030154
GO:GO:0007283 InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG82860
HOGENOM:HOG000294064 HOVERGEN:HBG063656 CTD:338323
OrthoDB:EOG4HDSSR EMBL:AY673647 EMBL:BC141199 EMBL:AY596199
IPI:IPI00460862 RefSeq:NP_001002894.2 UniGene:Mm.35644 HSSP:P10775
ProteinModelPortal:Q6B966 SMR:Q6B966 STRING:Q6B966
PhosphoSite:Q6B966 PRIDE:Q6B966 Ensembl:ENSMUST00000084763
GeneID:76858 KEGG:mmu:76858 GeneTree:ENSGT00700000104427
InParanoid:B2RUL1 OMA:FLEIPLC NextBio:345943 Bgee:Q6B966
CleanEx:MM_NLRP14 Genevestigator:Q6B966 Uniprot:Q6B966
Length = 993
Score = 161 (61.7 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 75/274 (27%), Positives = 120/274 (43%)
Query: 404 KVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQ 463
K + L+L+ LGVN K + +AL K + + + + L N LQ
Sbjct: 630 KKVTHLDLKETDLGVNGLKTLCEALK----CKGCKLRVLRLASCDLNVARCQK-LSNALQ 684
Query: 464 QAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHD 523
LV L+LS N GV+ L ++L + + GCK+LS AL
Sbjct: 685 -TNRSLVFLNLSLNNLSNDGVKSLCEVLENPNS-SLERLALASCGLTKAGCKVLSSAL-- 740
Query: 524 CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITA 582
+ K + L L N LE+EG K+L+ K + TL+ + + +G
Sbjct: 741 ---TKSKRLTHLCLS-----DNVLEDEGIKLLSHTLKHPQCTLQSLVLRSCSFTPIGSEH 792
Query: 583 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIA 640
LS A N++L HL+L N + G L +L + P +L L L C+L S +A
Sbjct: 793 LSTALLHNRSLVHLDLGQNKLADNGVKLLCHSLQQ-PHCNLQELELMSCVLTSKACGDLA 851
Query: 641 KYLTDNTTLEDVNLTCNEISVQGGLDLV-KAMKN 673
L +N+ L ++L N + GL+++ A++N
Sbjct: 852 SVLVNNSNLWSLDLGHNILD-DAGLNILCDALRN 884
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 57/220 (25%), Positives = 98/220 (44%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 527
++ LDL + G G++ L + L+ C + C+ LS AL ++
Sbjct: 631 KVTHLDLKETDLGVNGLKTLCEALKCKGC-KLRVLRLASCDLNVARCQKLSNAL----QT 685
Query: 528 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 586
++ S + L + + N L N+G K L V + + LER+ + G+ G LS A
Sbjct: 686 NR---SLVFLNLSL---NNLSNDGVKSLCEVLENPNSSLERLALASCGLTKAGCKVLSSA 739
Query: 587 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLT 644
++K L HL L+DN + +G L L K P +L L L C G+ ++ L
Sbjct: 740 LTKSKRLTHLCLSDNVLEDEGIKLLSHTL-KHPQCTLQSLVLRSCSFTPIGSEHLSTALL 798
Query: 645 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 684
N +L ++L N+++ G VK + + + N+ E
Sbjct: 799 HNRSLVHLDLGQNKLADNG----VKLLCHSLQQPHCNLQE 834
>UNIPROTKB|Q6E804 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9913 "Bos taurus" [GO:0002830
"positive regulation of type 2 immune response" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=IDA]
[GO:0046645 "positive regulation of gamma-delta T cell activation"
evidence=IMP] [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002710 "negative regulation
of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0032495 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0032874 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
GO:GO:0050871 GO:GO:0034136 GeneTree:ENSGT00660000095240
EMBL:AY518737 EMBL:AY518748 EMBL:AY518739 EMBL:AY518740
EMBL:AY518741 EMBL:AY518742 EMBL:AY518743 EMBL:AY518744
EMBL:AY518745 EMBL:AY518746 EMBL:AY518747 IPI:IPI00717866
RefSeq:NP_001002889.1 UniGene:Bt.30778 ProteinModelPortal:Q6E804
STRING:Q6E804 Ensembl:ENSBTAT00000027887 GeneID:444867
KEGG:bta:444867 CTD:64127 eggNOG:NOG248107 HOGENOM:HOG000113814
InParanoid:Q6E804 KO:K10165 OMA:WASGRAF OrthoDB:EOG4WM4T6
NextBio:20831757 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:0046645 GO:GO:2000363 Uniprot:Q6E804
Length = 1013
Score = 160 (61.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 66/233 (28%), Positives = 97/233 (41%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 527
R V L L N+ G IGVE L L C A I CKL+ AL C +
Sbjct: 764 RPVALQLDHNSVGDIGVEQLLPCL--GVCKALYLRDNNISDRGI--CKLVEHALR-CEQL 818
Query: 528 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 587
K LAL F N+L + A +A + + + + N I G L+
Sbjct: 819 QK-----LAL--F---NNKLTDGCAHSMARLLACKQNFLALRLGNNHITAAGAEVLAQGL 868
Query: 588 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 647
N +L+ L N + +GA L AL SL L+L + S GA ++A L N
Sbjct: 869 RTNNSLQFLGFWGNQVGDEGAQALAAALGDHQSLRWLSLVGNNIGSVGAQALALMLEKNM 928
Query: 648 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
LE++ L N + +G L K + + LK + +S N G E + + ++
Sbjct: 929 ALEELCLEENHVQDEGVCFLAKGLARNSSLKVLKLSNNHISSLGAEALLRALE 981
>UNIPROTKB|E1BR67 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002606 "positive regulation of dendritic cell antigen
processing and presentation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0016045 "detection
of bacterium" evidence=IEA] [GO:0016323 "basolateral plasma
membrane" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0050700 "CARD domain binding"
evidence=IEA] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0006917 GO:GO:0035556 GO:GO:0043123 GO:GO:0070374
GO:GO:0046330 GO:GO:0016323 GO:GO:0032755 GO:GO:0006919
GO:GO:0051092 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0032760 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0002606
CTD:10392 KO:K08727 GeneTree:ENSGT00660000095240 EMBL:AADN02001205
IPI:IPI00589517 RefSeq:XP_418777.2 UniGene:Gga.40185
ProteinModelPortal:E1BR67 Ensembl:ENSGALT00000018808 GeneID:420677
KEGG:gga:420677 OMA:MFEIGMW NextBio:20823559 Uniprot:E1BR67
Length = 951
Score = 159 (61.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 52/184 (28%), Positives = 88/184 (47%)
Query: 513 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 572
G K ++K + +C S E +K+ G N++ +EG K LA +K T+ + M
Sbjct: 770 GAKYVAKLIEEC---SSLE----YVKI---GANKITSEGGKCLAQAIQKSTTMFEIGMWG 819
Query: 573 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 632
N + G A +DA + L +++L N IT +G + +AL S+ I L L
Sbjct: 820 NQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELD 879
Query: 633 SAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 692
A S A+ L N L + L N+I+ +G L +A+K T +K++ ++ N +E
Sbjct: 880 DEAAMSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEA 939
Query: 693 EEME 696
+ E
Sbjct: 940 KAFE 943
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/156 (22%), Positives = 79/156 (50%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N++ + GA++L K + + + + N I +G ++ EE +L ++ + N IT
Sbjct: 736 NQITDHGARILYEELSKYQIVSYLGLYNNQITDIGAKYVAKLIEECSSLEYVKIGANKIT 795
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+G L QA+ K ++ + + + GA + A L ++ L +V+L N I+ +GG
Sbjct: 796 SEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGAKAFADALRNHPRLTNVSLAFNGITTEGG 855
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+ +A+++ +K +++N+ +E +++K
Sbjct: 856 KSIAEALQHNDSVKIFWLTKNELDDEAAMSFAEMLK 891
Score = 144 (55.7 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 39/156 (25%), Positives = 79/156 (50%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N++ + GAK +A + ++ +LE V++ N I G L+ A +++ + + + N +
Sbjct: 764 NQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVG 823
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+GA AL P L ++L + + G SIA+ L N +++ LT NE+ +
Sbjct: 824 DEGAKAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQHNDSVKIFWLTKNELDDEAA 883
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+ + +K KL + + +NQ +GV+ + + +K
Sbjct: 884 MSFAEMLKINKKLVHLWLIQNQITAKGVKYLSEALK 919
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/134 (28%), Positives = 70/134 (52%)
Query: 568 VEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 627
+++ N I G+ L F + L + L+ N IT GA L + LSK ++ L L
Sbjct: 706 LDLDNNNINDYGVKQLLPCFSK---LAVIRLSVNQITDHGARILYEELSKYQIVSYLGLY 762
Query: 628 DCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQF 687
+ + GA +AK + + ++LE V + N+I+ +GG L +A++ T + +I + NQ
Sbjct: 763 NNQITDIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQV 822
Query: 688 GEEGVEEMEKLMKS 701
G+EG + +++
Sbjct: 823 GDEGAKAFADALRN 836
Score = 128 (50.1 bits), Expect = 0.00029, P = 0.00029
Identities = 35/156 (22%), Positives = 76/156 (48%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N + + G K L F KL + R+ + N I G L + + + + +L L +N IT
Sbjct: 711 NNINDYGVKQLLPCFSKLAVI-RLSV--NQITDHGARILYEELSKYQIVSYLGLYNNQIT 767
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
GA + + + + SL + +G + S G +A+ + +TT+ ++ + N++ +G
Sbjct: 768 DIGAKYVAKLIEECSSLEYVKIGANKITSEGGKCLAQAIQKSTTMFEIGMWGNQVGDEGA 827
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
A++N +L ++++ N EG + + + ++
Sbjct: 828 KAFADALRNHPRLTNVSLAFNGITTEGGKSIAEALQ 863
>UNIPROTKB|Q8IZ02 [details] [associations]
symbol:LRRC34 "Leucine-rich repeat-containing protein 34"
species:9606 "Homo sapiens" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AC078795
EMBL:BC032841 IPI:IPI00217826 RefSeq:NP_001166250.1
RefSeq:NP_699184.2 UniGene:Hs.591289 ProteinModelPortal:Q8IZ02
SMR:Q8IZ02 PhosphoSite:Q8IZ02 DMDM:296434572 PRIDE:Q8IZ02
Ensembl:ENST00000316515 GeneID:151827 KEGG:hsa:151827 CTD:151827
GeneCards:GC03M169511 HGNC:HGNC:28408 HPA:HPA035747
neXtProt:NX_Q8IZ02 PharmGKB:PA142671522 eggNOG:NOG309390
HOGENOM:HOG000007976 HOVERGEN:HBG080754 InParanoid:Q8IZ02
PhylomeDB:Q8IZ02 GenomeRNAi:151827 NextBio:86795
ArrayExpress:Q8IZ02 Bgee:Q8IZ02 CleanEx:HS_LRRC34
Genevestigator:Q8IZ02 GermOnline:ENSG00000171757 Uniprot:Q8IZ02
Length = 419
Score = 153 (58.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 453 DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT 512
D Y L Q L+ L+L N GP G E +A +L + +T
Sbjct: 124 DVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKN---------RTLKYLRMT 174
Query: 513 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQ 572
G K+ +K + + + S L K+ + G LE E + + K+ L + M +
Sbjct: 175 GNKIENKG-GMFFAAMLQINSSLE-KLDL-GDCDLE-ESTVHVGRMLKENHCLVALHMCK 230
Query: 573 NGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 632
+ I + GI L DA N +LR+L+++ N IT+ G + L L +L +++L ++
Sbjct: 231 HDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIE 290
Query: 633 SAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 689
+AGA+ +++ LT N +L+ +++ N I +G + L ++MK I + N+F E
Sbjct: 291 NAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDE 348
Score = 143 (55.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 39/157 (24%), Positives = 81/157 (51%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N + EG +++A V K +TL+ + M N I + G + + N +L L+L D +
Sbjct: 148 NDIGPEGGELIAKVLHKNRTLKYLRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLE 207
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
+ + +G+ L + L L++ +K++G + L N++L ++++CN+I+ G
Sbjct: 208 -ESTVHVGRMLKENHCLVALHMCKHDIKNSGIQQLCDALYLNSSLRYLDVSCNKITHDGM 266
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
+ L +K+ T L+ I++S N+ G + + + S
Sbjct: 267 VYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLTS 303
Score = 129 (50.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 41/159 (25%), Positives = 76/159 (47%)
Query: 543 GRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
G N L + GA A + +K L + + N I G ++ +N+ L++L + N
Sbjct: 118 GYNLLCDVGAYYAAKLLQKQLNLIYLNLMFNDIGPEGGELIAKVLHKNRTLKYLRMTGNK 177
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
I KG + L SL L+LGDC L+ + + + L +N L +++ ++I
Sbjct: 178 IENKGGMFFAAMLQINSSLEKLDLGDCDLEESTVH-VGRMLKENHCLVALHMCKHDIKNS 236
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
G L A+ + L+ ++VS N+ +G+ + ++KS
Sbjct: 237 GIQQLCDALYLNSSLRYLDVSCNKITHDGMVYLADVLKS 275
Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 6/33 (18%), Positives = 18/33 (54%)
Query: 848 TKVLYRELFNWASNSDKLSTVTNALLVHLGLIK 880
T + + ++ W + D+ + + + L+ +G +K
Sbjct: 332 TNLTFSHIYIWGNKFDEATCIAYSDLIQMGCLK 364
>UNIPROTKB|Q5ZIY8 [details] [associations]
symbol:RNH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008428
"ribonuclease inhibitor activity" evidence=IEA] [GO:0032311
"angiogenin-PRI complex" evidence=IEA] [GO:0045765 "regulation of
angiogenesis" evidence=IEA] GO:GO:0005737 GO:GO:0045765
GO:GO:0008428 GO:GO:0032311 InterPro:IPR003590 SMART:SM00368
CTD:6050 eggNOG:NOG308334 HOGENOM:HOG000140402 HOVERGEN:HBG001059
KO:K16634 OrthoDB:EOG4DZ1VG GeneTree:ENSGT00670000097902
EMBL:AADN02030266 EMBL:AJ720646 IPI:IPI00573868
RefSeq:NP_001006473.1 UniGene:Gga.1426 STRING:Q5ZIY8
Ensembl:ENSGALT00000011181 GeneID:423111 KEGG:gga:423111
InParanoid:Q5ZIY8 OMA:AMAFANI NextBio:20825627 Uniprot:Q5ZIY8
Length = 456
Score = 152 (58.6 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 83/325 (25%), Positives = 145/325 (44%)
Query: 383 QGLKLDNKEDAKVIVDAIN---EVK-VLVSLNLEGNTLGVNAAKAIADALSKHEHFKRAL 438
Q L+L+ E IV+A+N + K L L+L NTLG A K + L + L
Sbjct: 140 QKLQLEYCELTADIVEALNAALQAKPTLKELSLSNNTLGDTAVKQLCRGLVEASCDLELL 199
Query: 439 WKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLAD-LLRSSCCF 497
+ G D+ R + L + L++L + DN G G+ L LL +C
Sbjct: 200 HLEN-CGITS----DSCRDISAVLSSKPS-LLDLAVGDNKIGDTGLALLCQGLLHPNCKI 253
Query: 498 AXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAA 557
CK LS+ S KE L+V + N L + G +ML
Sbjct: 254 QKLWLWDCDLTSA--SCKDLSRVF------STKE---TLLEVSLIDNN-LRDSGMEMLCQ 301
Query: 558 VFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALS 616
K K L+ + + + G+ A+S NK+L+ L++ +N + G L + L
Sbjct: 302 ALKDPKAHLQELWVRECGLTAACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEILCEGLL 361
Query: 617 KLPSLAI--LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 674
P+ I L LG+C + +A +++A + L +++L+ N + +G + L +A++N
Sbjct: 362 H-PNCNIHSLWLGNCDITAACCATLANVMVTKQNLTELDLSYNTLEDEGVMKLCEAVRNP 420
Query: 675 T-KLKQINVSENQFGEEGVEEMEKL 698
K++Q+ + + +G E +E++ L
Sbjct: 421 NCKMQQLILYDIFWGPEVDDELKAL 445
>UNIPROTKB|F1P9K0 [details] [associations]
symbol:NOD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090022 "regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0071224 "cellular response to
peptidoglycan" evidence=IEA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0050871
"positive regulation of B cell activation" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=IEA] [GO:0050700 "CARD
domain binding" evidence=IEA] [GO:0046330 "positive regulation of
JNK cascade" evidence=IEA] [GO:0044130 "negative regulation of
growth of symbiont in host" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042834
"peptidoglycan binding" evidence=IEA] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0032740 "positive
regulation of interleukin-17 production" evidence=IEA] [GO:0032735
"positive regulation of interleukin-12 production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032701 "negative
regulation of interleukin-18 production" evidence=IEA] [GO:0032695
"negative regulation of interleukin-12 production" evidence=IEA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IEA] [GO:0032500 "muramyl dipeptide binding" evidence=IEA]
[GO:0032498 "detection of muramyl dipeptide" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0031982 "vesicle" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016045
"detection of bacterium" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006965
"positive regulation of biosynthetic process of antibacterial
peptides active against Gram-positive bacteria" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002830 "positive regulation
of type 2 immune response" evidence=IEA] [GO:0002710 "negative
regulation of T cell mediated immunity" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002367 "cytokine production
involved in immune response" evidence=IEA] [GO:0002227 "innate
immune response in mucosa" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0032496
GO:GO:0070374 GO:GO:0032755 GO:GO:0045747 GO:GO:0050731
GO:GO:0050766 GO:GO:0032720 GO:GO:0044130 GO:GO:0035419
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0043330 GO:GO:0002606 GO:GO:0032735 GO:GO:0043552
GO:GO:0051770 GO:GO:2000110 GO:GO:0032733 GO:GO:0002830
GO:GO:0032703 GO:GO:0032874 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:2000363 OMA:QYECDEI
EMBL:AAEX03001616 Ensembl:ENSCAFT00000015589 Uniprot:F1P9K0
Length = 1013
Score = 156 (60.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 76/249 (30%), Positives = 115/249 (46%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITG-------CKLLSK- 519
R V L L N+ G IGVE L L S C A I C+ L K
Sbjct: 764 RPVALQLDHNSVGDIGVEQLLPCL--SVCKALYLRDNNISDRGICKLIEHALHCEQLQKL 821
Query: 520 ALHD------CYESSKKEGSPLALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVE 569
AL + C S + LA K F+A G NR+ GA+ LA + +L+ +
Sbjct: 822 ALFNNKLTDGCAHSMARL---LACKQNFLALRLGNNRITAAGAQALAEGLRANTSLQFLG 878
Query: 570 MPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 629
N + G AL++A ++++LR L+L N I GA L L K +L L L +
Sbjct: 879 FWGNKVGDEGAQALAEALGDHQSLRWLSLVGNDIGSVGARALALMLEKNVALEELCLEEN 938
Query: 630 LLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 689
L+ G S+AK L N++L+ + L+ N I+ G L++A++ + ++ + N F
Sbjct: 939 HLQDEGVCSLAKGLERNSSLKVLKLSNNCITYLGAEGLLQALEKNDTILEVWLRGNTFS- 997
Query: 690 EGVEEMEKL 698
+EEME+L
Sbjct: 998 --LEEMERL 1004
>MGI|MGI:1919077 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1919077
CTD:151827 eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
EMBL:AK005720 EMBL:BC100519 IPI:IPI00118820 RefSeq:NP_082217.1
UniGene:Mm.45373 ProteinModelPortal:Q9DAM1 SMR:Q9DAM1
PhosphoSite:Q9DAM1 PaxDb:Q9DAM1 PRIDE:Q9DAM1
Ensembl:ENSMUST00000029252 GeneID:71827 KEGG:mmu:71827
GeneTree:ENSGT00640000091171 InParanoid:Q9DAM1 OMA:HNRSLKA
OrthoDB:EOG4H9XM3 NextBio:334616 Bgee:Q9DAM1 CleanEx:MM_LRRC34
Genevestigator:Q9DAM1 GermOnline:ENSMUSG00000027702 Uniprot:Q9DAM1
Length = 415
Score = 156 (60.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 42/155 (27%), Positives = 82/155 (52%)
Query: 548 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 607
+ E + + K+ L + M ++G+ + G+ L +A N +LR+L+++ N IT G
Sbjct: 202 QEESTVHIGHMLKENHVLVELHMCKHGMKNYGLQQLCNALYLNSSLRYLDVSCNKITRDG 261
Query: 608 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLD 666
+ L L +L +L+L +++AGA +++ LT N +L+ +++ N+I +G +
Sbjct: 262 MVFLADVLKSNTTLEVLDLSFNRIETAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVA 321
Query: 667 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
L ++MK L I + N+F E+ L+KS
Sbjct: 322 LSQSMKTNLVLSNIYIWGNKFDEDTCVAYSDLIKS 356
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 89 LFNSLGPNCAQLFLDEINSEPEDRYL 114
+FN +GP +L ++ +YL
Sbjct: 110 MFNDIGPEGGELIAKALHKNKTLKYL 135
Score = 37 (18.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 391 EDAKVIVDAINEVKVLVSLNLEGNTL 416
E ++I A+++ K L L + GN +
Sbjct: 117 EGGELIAKALHKNKTLKYLRMTGNKI 142
>UNIPROTKB|Q86W25 [details] [associations]
symbol:NLRP13 "NACHT, LRR and PYD domains-containing
protein 13" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
EMBL:AY154468 EMBL:BK001108 IPI:IPI00249591 RefSeq:NP_789780.2
UniGene:Hs.446924 ProteinModelPortal:Q86W25 SMR:Q86W25
PhosphoSite:Q86W25 DMDM:145559500 PaxDb:Q86W25 PRIDE:Q86W25
DNASU:126204 Ensembl:ENST00000342929 GeneID:126204 KEGG:hsa:126204
UCSC:uc010ygg.2 CTD:126204 GeneCards:GC19M056407 H-InvDB:HIX0040054
HGNC:HGNC:22937 MIM:609660 neXtProt:NX_Q86W25 PharmGKB:PA162397891
eggNOG:NOG146595 InParanoid:Q86W25 OMA:ENLHELD OrthoDB:EOG40VVNS
PhylomeDB:Q86W25 GenomeRNAi:126204 NextBio:81710 Bgee:Q86W25
CleanEx:HS_NLRP13 Genevestigator:Q86W25 GermOnline:ENSG00000173572
Uniprot:Q86W25
Length = 1043
Score = 154 (59.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 61/225 (27%), Positives = 104/225 (46%)
Query: 464 QAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHD 523
Q ++L L+ S N G + V + LR S C + C L + + D
Sbjct: 779 QGNSKLTHLNFSSNKLG-MTVPLILKALRHSAC--------NLKYLCLEKCNLSAASCQD 829
Query: 524 C--YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGI 580
+ +S + + L L G NRL+++G K+L A K LER+E+ +
Sbjct: 830 LALFLTSIQHVTRLCL-----GFNRLQDDGIKLLCAALTHPKCALERLELWFCQLAAPAC 884
Query: 581 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSI 639
LSDA +N++L HLNL+ N++ +G L +AL + +L LNL C G +
Sbjct: 885 KHLSDALLQNRSLTHLNLSKNSLRDEGVKFLCEALGRPDGNLQSLNLSGCSFTREGCGEL 944
Query: 640 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSE 684
A L+ N ++ ++L N++ G L +A+K L + +++
Sbjct: 945 ANALSHNHNVKILDLGENDLQDDGVKLLCEALKPHRALHTLGLAK 989
>DICTYBASE|DDB_G0282605 [details] [associations]
symbol:DDB_G0282605 "Rho GTPase domain containing
protein" species:44689 "Dictyostelium discoideum" [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 Pfam:PF00071
dictyBase:DDB_G0282605 GO:GO:0005525 GO:GO:0007264
EMBL:AAFI02000047 eggNOG:KOG4308 RefSeq:XP_640151.1
ProteinModelPortal:Q54S88 EnsemblProtists:DDB0233293 GeneID:8623689
KEGG:ddi:DDB_G0282605 InParanoid:Q54S88 OMA:QWIPEIE Uniprot:Q54S88
Length = 552
Score = 150 (57.9 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 547 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYK 606
L +EG K ++ + + +++ N I +GI L + E N+ L L L++N I +
Sbjct: 47 LGDEGVKTISKALGQQAIVSSLDLSSNSITDIGIKHLCEGIESNRYLLFLKLDNNPIGDQ 106
Query: 607 GAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGL 665
G L Q+L SK L L + +C + + L+ N TLE ++L N+IS +G +
Sbjct: 107 GLKLLCQSLKSKQCVLKSLYISECDITGKSMEYLVDALSVNHTLETIHLNSNKISNEGAI 166
Query: 666 DLVKAMKNKTKLKQINVSENQFGEEG 691
L K + ++LK +++ G+ G
Sbjct: 167 ILSKLINGSSRLKNLSLFFCGIGDAG 192
>TAIR|locus:2083028 [details] [associations]
symbol:AT3G06000 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AC013454 KO:K14319 IPI:IPI00516588
RefSeq:NP_187251.1 UniGene:At.53197 ProteinModelPortal:Q9SFG4
SMR:Q9SFG4 PRIDE:Q9SFG4 EnsemblPlants:AT3G06000.1 GeneID:819771
KEGG:ath:AT3G06000 TAIR:At3g06000 eggNOG:NOG255239
HOGENOM:HOG000153458 InParanoid:Q9SFG4 OMA:ETCTHIK PhylomeDB:Q9SFG4
ProtClustDB:CLSN2915399 Genevestigator:Q9SFG4 Uniprot:Q9SFG4
Length = 211
Score = 138 (53.6 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 559 FKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSK 617
F L + + + + G AL +A + + +L+ + + N ITY+ A + L+
Sbjct: 33 FSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAATAIAVCLAA 92
Query: 618 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 677
L LNL + LK G I K + D LE V+++ N++ +G L L + + K
Sbjct: 93 KRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLARVVVKKGSF 151
Query: 678 KQINVSENQFGEEGVEEME 696
K +N+ N +G+EE++
Sbjct: 152 KMLNIDGNMISLKGIEEIK 170
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 578 VGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGA 636
VG++ +S F L +NL+ + GAI L AL + PSL ++ + + A
Sbjct: 25 VGVS-MSKPFSSFSFLTVINLSYTNLENGGAIALVNALKNSAPSLQVIEMAGNNITYEAA 83
Query: 637 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEME 696
++IA L L+ +NL+ N++ +G +++VK+M++ +L+ +++S N EG +
Sbjct: 84 TAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMED-WELEYVDMSYNDLRREGALRLA 142
Query: 697 KLMKSFG 703
+++ G
Sbjct: 143 RVVVKKG 149
>RGD|1565052 [details] [associations]
symbol:Lrrc34 "leucine rich repeat containing 34" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] RGD:1565052 CTD:151827
eggNOG:NOG309390 HOGENOM:HOG000007976 HOVERGEN:HBG080754
OrthoDB:EOG4H9XM3 EMBL:BC097432 IPI:IPI00372167
RefSeq:NP_001038161.1 UniGene:Rn.30636 ProteinModelPortal:Q4V8D9
PhosphoSite:Q4V8D9 GeneID:499589 KEGG:rno:499589 UCSC:RGD:1565052
InParanoid:Q4V8D9 NextBio:703364 Genevestigator:Q4V8D9
Uniprot:Q4V8D9
Length = 415
Score = 152 (58.6 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 41/155 (26%), Positives = 80/155 (51%)
Query: 548 ENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKG 607
+ E + + K+ L + M ++G+ + GI L +A N LR+L+++ N IT G
Sbjct: 202 QEESTVHIGHMSKQNHVLVELHMCKHGMKNYGIQQLCNALHSNSTLRYLDVSCNKITRDG 261
Query: 608 AIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLD 666
+ L L +L +L+L +++AGA +++ LT N +L+ +++ N+I +G +
Sbjct: 262 MVFLADVLKSNSTLEVLDLSFNRIENAGAKYLSETLTSHNRSLKALSVVSNKIEGEGLVA 321
Query: 667 LVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
L ++M L I + N+F E+ L++S
Sbjct: 322 LSQSMNTNLVLSNIYIWGNKFDEDTCVAYSNLIES 356
Score = 41 (19.5 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 451 IPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSS 494
I D Y L Q + L+L N GP G E +A L+ +
Sbjct: 86 IGDVGAYYAAKLLQKQPNITYLNLMFNDIGPEGGELIAKALQKN 129
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 89 LFNSLGPNCAQLFLDEINSEPEDRYL 114
+FN +GP +L + +YL
Sbjct: 110 MFNDIGPEGGELIAKALQKNKTLKYL 135
Score = 37 (18.1 bits), Expect = 9.8e-07, Sum P(3) = 9.8e-07
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 81 FLAAPSVSLFNSLGPNCAQLFLDEINSEPEDR 112
FL + ++ N L N Q +EI P+++
Sbjct: 10 FLCSENIRKTNPLILNILQKLDEEIEKRPKEK 41
>MGI|MGI:3612191 [details] [associations]
symbol:Nlrc5 "NLR family, CARD domain containing 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006952 "defense response" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO;IDA] [GO:0043549 "regulation of kinase
activity" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO;IMP] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=ISO]
[GO:0060339 "negative regulation of type I interferon-mediated
signaling pathway" evidence=ISO;IDA] [GO:0060340 "positive
regulation of type I interferon-mediated signaling pathway"
evidence=ISO] InterPro:IPR000767 PRINTS:PR00364 PROSITE:PS51450
MGI:MGI:3612191 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0045087 GO:GO:0051607 GO:GO:0032088 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0060339 GO:GO:0060340 GO:GO:0060335
eggNOG:NOG265451 CTD:84166 HOVERGEN:HBG108194 OrthoDB:EOG4Z0B4Q
EMBL:FJ889356 EMBL:AK220210 IPI:IPI00462310 IPI:IPI00944192
RefSeq:NP_001028379.2 UniGene:Mm.334720 ProteinModelPortal:C3VPR6
SMR:C3VPR6 IntAct:C3VPR6 STRING:C3VPR6 GeneID:434341
KEGG:mmu:434341 UCSC:uc009mwj.2 UCSC:uc012gio.1
HOGENOM:HOG000168392 InParanoid:Q571H9 NextBio:409534
Genevestigator:C3VPR6 Uniprot:C3VPR6
Length = 1915
Score = 170 (64.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 87/367 (23%), Positives = 150/367 (40%)
Query: 332 IDNPLGPAVIEL--NHKGRMTDKPNDDVSDIL-KKLESISVESGQDSTKLSFAGQGLKLD 388
+D+ PA++E+ G +T+ ++ L +LE E DS L A L+ +
Sbjct: 1389 VDSVSLPALMEVCAQASGCLTELSISEIQRKLWLQLEFPHQEGNSDSMALRLAHCDLETE 1448
Query: 389 NKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMK 448
+ +V+ ++ L + N ++K + + L K ++ F+ ++
Sbjct: 1449 HSHLMIQLVETYARLQQLSLSQVSFNDNDGTSSKLLQNILLSSCELKS--FRLTFS-QVS 1505
Query: 449 TEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXX 508
T+ +L +L GL L ELD S+N+ E L L+ +C
Sbjct: 1506 TK---SLTHLAFGLGHCH-HLEELDFSNNSLREEDTELLMGALQGTCRLKKLHLSFLPLG 1561
Query: 509 XXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERV 568
+ LL + L S+ L+ N++ + G + LAA+ KL L +
Sbjct: 1562 A--SSLALLIQGL------SRMT----LLQDLCLSHNQIGDVGTQCLAAILPKLPELRKF 1609
Query: 569 EMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGD 628
++ N I VG L+ + LR NL+ N I + G L L KLP L +L
Sbjct: 1610 DLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKFDLSR 1669
Query: 629 CLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFG 688
+ G +A L L +L+ N I GG+ LVK++ + L++I + N G
Sbjct: 1670 NQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGNNALG 1729
Query: 689 EEGVEEM 695
E E+
Sbjct: 1730 EPTALEL 1736
Score = 148 (57.2 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 45/155 (29%), Positives = 70/155 (45%)
Query: 537 LKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHL 596
L+ F N++ + G + LAA+ KL L + + N I HVG L+ + LR
Sbjct: 1606 LRKFDLSHNQIGDVGTQCLAAILPKLPELRKFNLSHNQIGHVGTQCLAAILPKLPELRKF 1665
Query: 597 NLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTC 656
+L+ N I G L L KLP L +L + AG + K LT LE++ L
Sbjct: 1666 DLSRNQIGDVGTQCLAAILPKLPELRKFDLSGNRIGPAGGVQLVKSLTHFEHLEEIKLGN 1725
Query: 657 NEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
N + L+L A + +L+ + + + G EG
Sbjct: 1726 NALGEPTALEL--AQRLPPQLRVLCLPSSHLGPEG 1758
Score = 51 (23.0 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 469 LVELDLSDNAFGPIGVEGLADLL 491
L +LDL+DN G IG+ L + L
Sbjct: 1243 LSQLDLTDNLLGDIGLRCLLECL 1265
Score = 41 (19.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 223 TNALLVHLGLIKCEDKSFKINYN 245
++ LL ++ L CE KSF++ ++
Sbjct: 1480 SSKLLQNILLSSCELKSFRLTFS 1502
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 297 VETFVPPEVLL 307
VETF P E LL
Sbjct: 446 VETFSPSETLL 456
Score = 37 (18.1 bits), Expect = 9.5e-05, Sum P(3) = 9.5e-05
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 255 LLSEAKLLPSLTESQLLACMKLMDEKKTLV--IKVPIS 290
+LS +LLPSL + Q L + + L+ +KV I+
Sbjct: 762 VLSLVELLPSLPKLQKLDLSRNSFSRSILLSLVKVAIT 799
>MGI|MGI:1195456 [details] [associations]
symbol:Rnh1 "ribonuclease/angiogenin inhibitor 1"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008428 "ribonuclease inhibitor activity" evidence=ISO]
[GO:0032311 "angiogenin-PRI complex" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0045765 "regulation of angiogenesis" evidence=ISO]
MGI:MGI:1195456 GO:GO:0005737 GO:GO:0045765 GO:GO:0008428
GO:GO:0032311 eggNOG:NOG309390 InterPro:IPR003590 SMART:SM00368
CTD:6050 HOGENOM:HOG000140402 HOVERGEN:HBG001059 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG ChiTaRS:RNH1 EMBL:AF071546
EMBL:AK133822 EMBL:AK141351 EMBL:AK147059 EMBL:BC010331
IPI:IPI00313296 RefSeq:NP_001165571.1 RefSeq:NP_001165572.1
RefSeq:NP_660117.2 UniGene:Mm.279485 PDB:3TSR PDBsum:3TSR
ProteinModelPortal:Q91VI7 SMR:Q91VI7 IntAct:Q91VI7 STRING:Q91VI7
PhosphoSite:Q91VI7 UCD-2DPAGE:Q91VI7 PaxDb:Q91VI7 PRIDE:Q91VI7
Ensembl:ENSMUST00000106033 Ensembl:ENSMUST00000167493 GeneID:107702
KEGG:mmu:107702 UCSC:uc009kjs.2 GeneTree:ENSGT00670000097902
InParanoid:Q91VI7 NextBio:359282 Bgee:Q91VI7 CleanEx:MM_RNH1
Genevestigator:Q91VI7 GermOnline:ENSMUSG00000038650 Uniprot:Q91VI7
Length = 456
Score = 154 (59.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 65/236 (27%), Positives = 112/236 (47%)
Query: 467 ARLVELDLSDNAFGPIGVEGLAD-LLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
A L ELDLS N G G+ L LL SC GCK L + L
Sbjct: 222 ASLQELDLSSNKLGNAGIAALCPGLLLPSCKLRTLWLWECDITAE--GCKDLCRVLRA-- 277
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHVGITALS 584
+ S KE L+L N L++EGA++L ++ + LE + + +
Sbjct: 278 KQSLKE---LSL-----ASNELKDEGARLLCESLLEPGCQLESLWIKTCSLTAASCPYFC 329
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYL 643
++++L L ++ N + +G L +ALS+ + L L LGDC + ++G SS+A L
Sbjct: 330 SVLTKSRSLLELQMSSNPLGDEGVQELCKALSQPDTVLRELWLGDCDVTNSGCSSLANVL 389
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKL 698
N +L +++L+ N + G L L++++K + L+Q+ + + + E E++ L
Sbjct: 390 LANRSLRELDLSNNCMGGPGVLQLLESLKQPSCTLQQLVLYDIYWTNEVEEQLRAL 445
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 318 GWIKVINSMVSVIPIDNPLGPAVIELNHKG 347
G ++ ++++ + DNP+G A ++L +G
Sbjct: 102 GMLRSLSTLRELHLNDNPMGDAGLKLLCEG 131
>ZFIN|ZDB-GENE-110913-19 [details] [associations]
symbol:si:dkey-156k2.3 "si:dkey-156k2.3"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 ZFIN:ZDB-GENE-110913-19 GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR007111 PROSITE:PS50837
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101971 EMBL:BX324126 EMBL:BX465205
EMBL:BX957251 Ensembl:ENSDART00000150746 Uniprot:H0WFD4
Length = 1252
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 91/353 (25%), Positives = 150/353 (42%)
Query: 348 RMTDKPNDDVSDILKKLESISVESGQDSTK-LSFAGQGLKLDNKEDAKVIVDAINEVKVL 406
R D N+D+ D KL S ++S + L L + + E + + N VL
Sbjct: 719 RELDLSNNDLQDSGVKLLSDGLKSPDCKLETLRLVMCKLTVRSCESLSSALQSSN--CVL 776
Query: 407 VSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAG 466
L+L N L + K ++D L K + K + F + D+ L + LQ +
Sbjct: 777 RELDLSNNDLQDSGVKLLSDGL-KSPNCKLETLR--FV--LCNITADSCESLSSALQSSN 831
Query: 467 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 526
L ELDLS+N GV+ L+D L+S + GC L +++
Sbjct: 832 CVLRELDLSNNGLQDSGVKLLSDGLKSP--------DFKLETLSLQGCNLTTQSFESL-- 881
Query: 527 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFK----KLKTLERVEMPQNGIYHVGITA 582
SS + S L+ N L++ K+L+ K KL+TL R++ + + +
Sbjct: 882 SSALQSSNCVLRELDLSNNDLQHSAVKLLSDGLKSPNCKLETL-RLQWCKLTVQ--SCES 938
Query: 583 LSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIA 640
LS A + N LR L+L++N + G L + S L L L C L S++
Sbjct: 939 LSSALQSSNCVLRELDLSNNDLQDSGVKLHSDGLKTVNSKLETLRLAMCNLTVQCCESLS 998
Query: 641 KYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEG 691
L + N L +++L+ N++ G L +K+ KL+ + +S EEG
Sbjct: 999 SALQSSNYVLRELDLSNNDLQDSGVKKLSDGLKSLNCKLETLRLSGCMVTEEG 1051
Score = 133 (51.9 bits), Expect = 0.00012, P = 0.00012
Identities = 64/250 (25%), Positives = 107/250 (42%)
Query: 458 LGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLL 517
L + LQ + L ELDLS+N GV+ L+D L+S C + CKL
Sbjct: 707 LSSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSPDC--------KLETLRLVMCKLT 758
Query: 518 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIY 576
++ SS + S L+ N L++ G K+L+ K LE + I
Sbjct: 759 VRSCESL--SSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSPNCKLETLRFVLCNIT 816
Query: 577 HVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKS 633
+LS A + N LR L+L++N + G L L K P L L+L C L +
Sbjct: 817 ADSCESLSSALQSSNCVLRELDLSNNGLQDSGVKLLSDGL-KSPDFKLETLSLQGCNLTT 875
Query: 634 AGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG 691
S++ L + N L +++L+ N++ L +K+ KL+ + + + +
Sbjct: 876 QSFESLSSALQSSNCVLRELDLSNNDLQHSAVKLLSDGLKSPNCKLETLRLQWCKLTVQS 935
Query: 692 VEEMEKLMKS 701
E + ++S
Sbjct: 936 CESLSSALQS 945
>UNIPROTKB|E1C3J0 [details] [associations]
symbol:LOC100859479 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR002048 InterPro:IPR011992 PROSITE:PS50222 GO:GO:0005509
Gene3D:1.10.238.10 GeneTree:ENSGT00640000091171 EMBL:AADN02003486
IPI:IPI00822711 Ensembl:ENSGALT00000037695 Uniprot:E1C3J0
Length = 497
Score = 150 (57.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 60/247 (24%), Positives = 108/247 (43%)
Query: 465 AGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDC 524
+ A + L+L DN G + +A++LR +C + L++
Sbjct: 39 SNATVTHLELEDNHILAEGAKCIAEMLRENCSLRELVPNLIQQKNVLPNVSWLTEDKDPS 98
Query: 525 YE---SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGIT 581
++K E S L F+ + L ++ LK + ++++ G H T
Sbjct: 99 LRPQHNTKGEISTLFTHFFLHRKQFL----FPSFCTIWHHLK-MPQLQLV--GRSHSSCT 151
Query: 582 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAK 641
+S + N ++ L+L+ N + KG LGQ L+ +L IL+L L+ G +
Sbjct: 152 FVS--LQSNYQVKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGT 209
Query: 642 YLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMKS 701
L N L+ +NL+ N I +G L +A+K + L +++S NQ EG +++ K +K
Sbjct: 210 GLKGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNEGAKKICKGLKV 269
Query: 702 FGMAAAL 708
G L
Sbjct: 270 NGTLKVL 276
Score = 147 (56.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N +G ++L + TLE +++ N + G A + N L+ LNL+ N+I
Sbjct: 169 NEFSEKGGQLLGQMLAVNTTLEILDLSWNHLRRKGTVAFGTGLKGNAALKILNLSWNSIG 228
Query: 605 YKGAIPLGQALSKLPSLAI-LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 663
+GA L +AL K+ S+ I L++ + + + GA I K L N TL+ + + N ++V+G
Sbjct: 229 NEGAQALAEAL-KVNSVLIHLDISNNQINNEGAKKICKGLKVNGTLKVLKMANNLLTVEG 287
Query: 664 GLDLVKAM-KNKTK-LKQINVS 683
+LV ++ KN +++IN+S
Sbjct: 288 ATELVGSVRKNPNSVMEEINIS 309
Score = 126 (49.4 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 546 RLENEGAKMLAAVFKKLKT---LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
+L+ G + F L++ ++ +++ N G L N L L+L+ N
Sbjct: 139 QLQLVGRSHSSCTFVSLQSNYQVKELDLSHNEFSEKGGQLLGQMLAVNTTLEILDLSWNH 198
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
+ KG + G L +L ILNL + + GA ++A+ L N+ L ++++ N+I+ +
Sbjct: 199 LRRKGTVAFGTGLKGNAALKILNLSWNSIGNEGAQALAEALKVNSVLIHLDISNNQINNE 258
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 695
G + K +K LK + ++ N EG E+
Sbjct: 259 GAKKICKGLKVNGTLKVLKMANNLLTVEGATEL 291
Score = 42 (19.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 399 AINEVKVLVSLNLEGNTLGVNAAKAIADAL 428
A N K ++LN G LG KAIA AL
Sbjct: 10 AQNLTKPYINLNHHG--LGPKGVKAIAIAL 37
Score = 37 (18.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 472 LDLSDNAFGPIGVEGLADLLRSS 494
++L+ + GP GV+ +A L S+
Sbjct: 18 INLNHHGLGPKGVKAIAIALVSN 40
>ZFIN|ZDB-GENE-060421-8264 [details] [associations]
symbol:zgc:136791 "zgc:136791" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-060421-8264 InterPro:IPR007111
PROSITE:PS50837 eggNOG:NOG82860 OrthoDB:EOG4HX508
GeneTree:ENSGT00690000101934 EMBL:AL929041 IPI:IPI00758745
UniGene:Dr.113712 UniGene:Dr.84346 ProteinModelPortal:A5PF24
Ensembl:ENSDART00000144759 HOVERGEN:HBG092009 OMA:PHCKLEK
ArrayExpress:A5PF24 Bgee:A5PF24 Uniprot:A5PF24
Length = 938
Score = 149 (57.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 65/250 (26%), Positives = 109/250 (43%)
Query: 458 LGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLL 517
L + L+ + L ELDLS N G GV+ L+ L+ C GC L
Sbjct: 654 LASALRSNSSNLRELDLSYNIVGDSGVKLLSAGLKDPHCKLEKLRLRCCGVSD-EGCADL 712
Query: 518 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIY 576
+ L SS L+ + + + G K+L+A K LE++ + G+
Sbjct: 713 ASVLRS--NSSNLRELELSKNINVG------DSGVKLLSAGLKDPHCKLEKLRLGYCGVS 764
Query: 577 HVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKS 633
G AL+ N NLR L+L+DN I G L L K P L L L +C +
Sbjct: 765 DEGCAALASVLRSNSSNLRELDLSDNKIVDSGVKRLSAGL-KDPQCKLETLRLINCDVSG 823
Query: 634 AGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEG 691
G +++A L N++ L ++NL+ N++ G L +K+ KL+++ ++ +
Sbjct: 824 KGCAALASALRSNSSNLRELNLSENKVGDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDAS 883
Query: 692 VEEMEKLMKS 701
++ ++S
Sbjct: 884 CADLASALRS 893
Score = 137 (53.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 63/249 (25%), Positives = 109/249 (43%)
Query: 455 LRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGC 514
++ L GL+ +L +L L G LA +LRS+ +G
Sbjct: 680 VKLLSAGLKDPHCKLEKLRLRCCGVSDEGCADLASVLRSNSSNLRELELSKNINVGDSGV 739
Query: 515 KLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQN 573
KLLS L D + +K L++ G + +EG LA+V + + L +++ N
Sbjct: 740 KLLSAGLKDPHCKLEK------LRLGYCG---VSDEGCAALASVLRSNSSNLRELDLSDN 790
Query: 574 GIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQAL-SKLPSLAILNLGDCLL 631
I G+ LS ++ + L L L + ++ KG L AL S +L LNL + +
Sbjct: 791 KIVDSGVKRLSAGLKDPQCKLETLRLINCDVSGKGCAALASALRSNSSNLRELNLSENKV 850
Query: 632 KSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQFGE 689
+G ++ L D + LE + L +S DL A++ N + L+++N+ N+
Sbjct: 851 GDSGVKRLSAGLKDPHCKLEKLTLNYCGVSDASCADLASALRSNSSNLRELNLKWNRVEG 910
Query: 690 EGVEEMEKL 698
GV+ + L
Sbjct: 911 IGVKWLSDL 919
>MGI|MGI:2429397 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0002227 "innate immune response in
mucosa" evidence=IMP] [GO:0002253 "activation of immune response"
evidence=IMP] [GO:0002282 "microglial cell activation involved in
immune response" evidence=ISO] [GO:0002367 "cytokine production
involved in immune response" evidence=ISO] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IMP] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IMP]
[GO:0002710 "negative regulation of T cell mediated immunity"
evidence=IMP] [GO:0002732 "positive regulation of dendritic cell
cytokine production" evidence=ISO] [GO:0002830 "positive regulation
of type 2 immune response" evidence=ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IMP] [GO:0002925 "positive regulation of humoral immune
response mediated by circulating immunoglobulin" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006952 "defense response" evidence=TAS] [GO:0006954
"inflammatory response" evidence=TAS] [GO:0006965 "positive
regulation of biosynthetic process of antibacterial peptides active
against Gram-positive bacteria" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISO] [GO:0009595 "detection of biotic
stimulus" evidence=TAS] [GO:0009986 "cell surface" evidence=ISO]
[GO:0016045 "detection of bacterium" evidence=ISO] [GO:0016888
"endodeoxyribonuclease activity, producing 5'-phosphomonoesters"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0032494 "response to peptidoglycan"
evidence=IMP;IDA] [GO:0032495 "response to muramyl dipeptide"
evidence=ISO;IDA;IMP] [GO:0032496 "response to lipopolysaccharide"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=ISO] [GO:0032500 "muramyl dipeptide binding" evidence=ISO]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IMP] [GO:0032695 "negative regulation of interleukin-12
production" evidence=IMP;IDA] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IMP] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IMP] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IMP] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=ISO] [GO:0032733 "positive regulation of
interleukin-10 production" evidence=IMP] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA;IMP]
[GO:0032740 "positive regulation of interleukin-17 production"
evidence=ISO] [GO:0032755 "positive regulation of interleukin-6
production" evidence=ISO;IGI;IDA;IMP] [GO:0032760 "positive
regulation of tumor necrosis factor production"
evidence=IGI;ISO;IDA;IMP] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO;IDA] [GO:0034136
"negative regulation of toll-like receptor 2 signaling pathway"
evidence=IMP] [GO:0035419 "activation of MAPK activity involved in
innate immune response" evidence=IDA] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO] [GO:0042834 "peptidoglycan binding"
evidence=ISO;TAS] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IDA] [GO:0043330 "response
to exogenous dsRNA" evidence=IMP] [GO:0043410 "positive regulation
of MAPK cascade" evidence=IMP] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0044130
"negative regulation of growth of symbiont in host" evidence=IMP]
[GO:0045089 "positive regulation of innate immune response"
evidence=IMP] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0046330 "positive regulation of JNK
cascade" evidence=ISO;IDA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IMP] [GO:0050700 "CARD
domain binding" evidence=ISO] [GO:0050718 "positive regulation of
interleukin-1 beta secretion" evidence=ISO;IDA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IMP] [GO:0050766 "positive regulation of phagocytosis"
evidence=IMP] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IGI;IMP] [GO:0050871 "positive regulation of B
cell activation" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO;IMP]
[GO:0051259 "protein oligomerization" evidence=TAS] [GO:0051353
"positive regulation of oxidoreductase activity" evidence=IDA]
[GO:0051770 "positive regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=ISO] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=IDA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IDA] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IMP] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IMP] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IMP] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=IDA] [GO:2000363 "positive
regulation of prostaglandin-E synthase activity" evidence=IDA]
InterPro:IPR001315 InterPro:IPR018228 Pfam:PF00619 PROSITE:PS50209
MGI:MGI:2429397 GO:GO:0051259 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0019901 GO:GO:0009986 GO:GO:0016045
GO:GO:0002381 GO:GO:0032689 GO:GO:0002862 GO:GO:0050830
GO:GO:0035556 GO:GO:0043123 GO:GO:0032496 GO:GO:0006954
GO:GO:0070374 GO:GO:0046330 GO:GO:0032755 GO:GO:0045747
GO:GO:0050731 GO:GO:0050766 GO:GO:0032720 GO:GO:0044130
Reactome:REACT_107772 GO:GO:0035419 GO:GO:0051092 GO:GO:0031398
GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10 InterPro:IPR011029
SUPFAM:SSF47986 GO:GO:0016888 GO:GO:0031982 GO:GO:0008180
GO:GO:0006965 GO:GO:0002227 GO:GO:0042834 GO:GO:0032695
GO:GO:0032760 GO:GO:0050679 GO:GO:0050700 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606 GO:GO:0032735
GO:GO:0043552 GO:GO:0051770 GO:GO:2000110 GO:GO:0032733
GO:GO:0002830 GO:GO:0032703 GO:GO:0060585 GO:GO:0090022
GO:GO:0002925 GO:GO:0070431 GO:GO:0032740 GO:GO:0050871
GO:GO:0034136 GeneTree:ENSGT00660000095240 eggNOG:NOG248107
HOGENOM:HOG000113814 GO:GO:0032500 GO:GO:0071224 GO:GO:0002367
GO:GO:0032498 GO:GO:0071608 GO:GO:0032701 GO:GO:0002710
GO:GO:2000363 HOVERGEN:HBG050792 OMA:QYECDEI EMBL:AF520774
EMBL:BC044774 IPI:IPI00223373 IPI:IPI00230403 UniGene:Mm.222633
ProteinModelPortal:Q8K3Z0 SMR:Q8K3Z0 DIP:DIP-46115N STRING:Q8K3Z0
PhosphoSite:Q8K3Z0 PRIDE:Q8K3Z0 Ensembl:ENSMUST00000054324
Ensembl:ENSMUST00000109634 Bgee:Q8K3Z0 Genevestigator:Q8K3Z0
Uniprot:Q8K3Z0
Length = 1020
Score = 146 (56.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/161 (28%), Positives = 83/161 (51%)
Query: 535 LALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLR 594
L+L+V G N + GA++LA K +L+ + N + G AL++ +++NL+
Sbjct: 854 LSLRV---GNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLK 910
Query: 595 HLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNL 654
L+L N I GA L L K SL L L + + G S+A+ L N+TL+ + L
Sbjct: 911 WLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKL 970
Query: 655 TCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 695
+ N I+ +G L++A+ + + ++ + N F E ++ +
Sbjct: 971 SNNGITYRGAEALLQALSRNSAILEVWLRGNTFSLEEIQTL 1011
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 59/228 (25%), Positives = 95/228 (41%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYES 527
R V L L N+ G +GVE L L C A G + L + C +
Sbjct: 771 RPVALQLDYNSVGDVGVEQLRPCL--GVCTALYLRDNNISDR---GARTLVECALRCEQL 825
Query: 528 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF 587
K LAL F N+L + A +A + + + + N I G L+
Sbjct: 826 QK-----LAL--F---NNKLTDACACSMAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGL 875
Query: 588 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNT 647
+ N +L+ L N++ KG L + ++ +L L+L + S GA ++A L N
Sbjct: 876 KSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNK 935
Query: 648 TLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEM 695
+LE++ L N I +G L + +K + LK + +S N G E +
Sbjct: 936 SLEELCLEENHICDEGVYSLAEGLKRNSTLKFLKLSNNGITYRGAEAL 983
Score = 130 (50.8 bits), Expect = 0.00020, P = 0.00020
Identities = 35/156 (22%), Positives = 70/156 (44%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N + + GA+ L + + L+++ + N + +++ +N L + +N IT
Sbjct: 805 NNISDRGARTLVECALRCEQLQKLALFNNKLTDACACSMAKLLAHKQNFLSLRVGNNHIT 864
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
GA L Q L SL L + G ++A+ + D+ L+ ++L N I G
Sbjct: 865 AAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGTQALAEVVADHQNLKWLSLVGNNIGSMGA 924
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
L ++ L+++ + EN +EGV + + +K
Sbjct: 925 EALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK 960
>DICTYBASE|DDB_G0295827 [details] [associations]
symbol:DDB_G0295827 "leucine-rich repeat-containing
protein (LRR)" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450
dictyBase:DDB_G0295827 EMBL:AAFI02000012 RefSeq:XP_002649178.1
EnsemblProtists:DDB0266619 GeneID:8619365 KEGG:ddi:DDB_G0295827
OMA:KLIWSYN ProtClustDB:CLSZ2846621 Uniprot:C7FZZ3
Length = 572
Score = 148 (57.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 579 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASS 638
G +L+D NK+L+ L+L N GAI L L+ PSL+IL+L L+ + G
Sbjct: 337 GALSLADTLAINKSLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDK 396
Query: 639 IAKYLTDNTTLEDVNLTCNEISVQGGLD-LVKAMK-NKTKLKQINVSE 684
I L NTTL ++NL+ N++ + L+ L ++ NKT L +N+SE
Sbjct: 397 ILFSLESNTTLTNLNLSRNQLDLSIPLNYLTSSLAFNKT-LTSLNLSE 443
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 47/156 (30%), Positives = 80/156 (51%)
Query: 536 ALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRH 595
+LK G N+ + GA LA+ +L +++ N I G + + E N L +
Sbjct: 350 SLKELDLGSNQFGDAGAITLASKLNSHPSLSILDLSSNLISTEGFDKILFSLESNTTLTN 409
Query: 596 LNLNDNTITYKGAIPLGQALSKLP---SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDV 652
LNL+ N + +IPL S L +L LNL +C L+++ I+ L N L+ +
Sbjct: 410 LNLSRNQLDL--SIPLNYLTSSLAFNKTLTSLNLSECNLQNSHFIQISIALQSNKKLKKL 467
Query: 653 NLTCNEIS-VQGGLDLVKAMKNKTKLKQINVSENQF 687
NL+ N IS ++ ++++ NKT LK I +S+++F
Sbjct: 468 NLSKNNISDIKPFFTIIQS--NKT-LKSIYLSKHKF 500
Score = 44 (20.5 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 26/131 (19%), Positives = 56/131 (42%)
Query: 361 LKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNA 420
+K ++S S+ ++ KL+F + + + D + + + L+L+ + VN
Sbjct: 226 VKVIQS-SLSCNRNIRKLAFDSCPI---GDQGVVYLSDVLESNQCIRQLDLQ-SCGSVNG 280
Query: 421 AKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFG 480
+ + ALS ++ ++ +W + T + L NGL+ +++ L +
Sbjct: 281 LEYLGRALSNNQTLEKLIWS--YNQSNYTSV----MCLSNGLRNPHSQMKSLIMKGCDIE 334
Query: 481 PIGVEGLADLL 491
G LAD L
Sbjct: 335 GWGALSLADTL 345
Score = 37 (18.1 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 312 IADQEEGWIKVINSMVSVIPIDN 334
I D+++ I +N+ +S+I IDN
Sbjct: 7 IKDEDQEII-CLNNDISLIEIDN 28
>RGD|1306368 [details] [associations]
symbol:Nod2 "nucleotide-binding oligomerization domain
containing 2" species:10116 "Rattus norvegicus" [GO:0002227 "innate
immune response in mucosa" evidence=IEA;ISO] [GO:0002253
"activation of immune response" evidence=ISO] [GO:0002282
"microglial cell activation involved in immune response"
evidence=IDA] [GO:0002367 "cytokine production involved in immune
response" evidence=IEA;ISO] [GO:0002381 "immunoglobulin production
involved in immunoglobulin mediated immune response"
evidence=IEA;ISO] [GO:0002606 "positive regulation of dendritic
cell antigen processing and presentation" evidence=ISO] [GO:0002710
"negative regulation of T cell mediated immunity" evidence=IEA;ISO]
[GO:0002732 "positive regulation of dendritic cell cytokine
production" evidence=IDA] [GO:0002830 "positive regulation of type
2 immune response" evidence=IEA;ISO] [GO:0002862 "negative
regulation of inflammatory response to antigenic stimulus"
evidence=IEA;ISO] [GO:0002925 "positive regulation of humoral
immune response mediated by circulating immunoglobulin"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA;ISO] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0016045 "detection of bacterium" evidence=IEA;ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISO] [GO:0031982 "vesicle"
evidence=IEA;ISO] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0032494
"response to peptidoglycan" evidence=ISO] [GO:0032495 "response to
muramyl dipeptide" evidence=ISO;IDA] [GO:0032496 "response to
lipopolysaccharide" evidence=IEA;ISO] [GO:0032498 "detection of
muramyl dipeptide" evidence=IEA;ISO] [GO:0032500 "muramyl dipeptide
binding" evidence=ISO;IDA] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032695
"negative regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032701 "negative regulation of
interleukin-18 production" evidence=IEA;ISO] [GO:0032703 "negative
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISO] [GO:0032733 "positive
regulation of interleukin-10 production" evidence=ISO] [GO:0032735
"positive regulation of interleukin-12 production"
evidence=IEA;ISO] [GO:0032740 "positive regulation of
interleukin-17 production" evidence=IEA;ISO] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA;ISO]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA;ISO] [GO:0032874 "positive regulation of
stress-activated MAPK cascade" evidence=ISO] [GO:0034136 "negative
regulation of toll-like receptor 2 signaling pathway"
evidence=IEA;ISO] [GO:0035419 "activation of MAPK activity involved
in innate immune response" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISO] [GO:0042742 "defense response to
bacterium" evidence=ISO;IDA] [GO:0042834 "peptidoglycan binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA;ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043552 "positive
regulation of phosphatidylinositol 3-kinase activity" evidence=ISO]
[GO:0044130 "negative regulation of growth of symbiont in host"
evidence=IEA;ISO] [GO:0045089 "positive regulation of innate immune
response" evidence=ISO] [GO:0045747 "positive regulation of Notch
signaling pathway" evidence=ISO] [GO:0046330 "positive regulation
of JNK cascade" evidence=IEA;ISO] [GO:0050679 "positive regulation
of epithelial cell proliferation" evidence=ISO] [GO:0050700 "CARD
domain binding" evidence=IEA;ISO] [GO:0050718 "positive regulation
of interleukin-1 beta secretion" evidence=IEA;ISO] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA;ISO] [GO:0050766 "positive regulation of phagocytosis"
evidence=IEA;ISO] [GO:0050830 "defense response to Gram-positive
bacterium" evidence=IEA;ISO] [GO:0050871 "positive regulation of B
cell activation" evidence=IEA;ISO] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA;ISO]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISO] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISO] [GO:0052033
"pathogen-associated molecular pattern dependent induction by
symbiont of host innate immune response" evidence=IDA] [GO:0060585
"positive regulation of prostaglandin-endoperoxide synthase
activity" evidence=ISO] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA;ISO] [GO:0070431 "nucleotide-binding
oligomerization domain containing 2 signaling pathway"
evidence=IEA;ISO] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA;ISO] [GO:0071608 "macrophage inflammatory protein-1
alpha production" evidence=IEA;ISO] [GO:0090022 "regulation of
neutrophil chemotaxis" evidence=IEA;ISO] [GO:2000110 "negative
regulation of macrophage apoptotic process" evidence=ISO]
[GO:2000363 "positive regulation of prostaglandin-E synthase
activity" evidence=ISO] InterPro:IPR001315 Pfam:PF00619
PROSITE:PS50209 RGD:1306368 GO:GO:0005737 GO:GO:0042981
GO:GO:0008284 GO:GO:0042742 GO:GO:0007584 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0052033 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0032495 GO:GO:0002282 GO:GO:0032500
IPI:IPI00359351 ProteinModelPortal:F1LZ02
Ensembl:ENSRNOT00000018996 GO:GO:0002732 Uniprot:F1LZ02
Length = 1019
Score = 143 (55.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 524
R V L L N+ G +GVE L L + + + C L + L
Sbjct: 770 RPVALQLDHNSVGDVGVEQLLPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLAL 829
Query: 525 YESSKKEGSPLALKVFIA----------GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 574
+ + +G ++ +A G N + GA++LA K +L+ + N
Sbjct: 830 FNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLQFLGFWGNS 889
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 634
+ G AL++ +++ L+ L+L N I GA L L K SL L L + +
Sbjct: 890 VGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKSLEELCLEENHICDE 949
Query: 635 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 694
G S+A+ L N+TL+ + L+ N I+ +G L++A+ + + ++ + N F E +
Sbjct: 950 GVYSLAEGLKRNSTLKFLKLSNNGITYRGAEALLQALNRNSTVLEVWLRGNTFSPEEAQT 1009
Query: 695 M 695
+
Sbjct: 1010 L 1010
Score = 126 (49.4 bits), Expect = 0.00053, P = 0.00053
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
N + + GA+ L + + L+++ + N + ++++ +N L + +N IT
Sbjct: 804 NNISDRGARTLVECALRCEQLQKLALFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHIT 863
Query: 605 YKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
GA L Q L SL L + G+ ++A+ + D+ L+ ++L N I G
Sbjct: 864 AAGAEVLAQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGA 923
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
L ++ L+++ + EN +EGV + + +K
Sbjct: 924 HALALMLEKNKSLEELCLEENHICDEGVYSLAEGLK 959
>UNIPROTKB|F1NAC7 [details] [associations]
symbol:F1NAC7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0045944 GO:GO:0046677
GO:GO:0000122 GO:GO:0044212 InterPro:IPR025875 Pfam:PF12799
GO:GO:0034341 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AADN02023473 IPI:IPI00571200
Ensembl:ENSGALT00000011613 OMA:EQTKDYE Uniprot:F1NAC7
Length = 759
Score = 141 (54.7 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 555 LAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQA 614
+ A F L+ L+ + +NGI G +LS+ F +L LNL+ N IT GA L A
Sbjct: 610 ILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLATA 669
Query: 615 LSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK 674
L L SL L+L + + GA ++AK L +L +++ N+I+ G L +++
Sbjct: 670 LPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSLRKC 729
Query: 675 TKLKQINVSENQFGEEGV-EEMEKL 698
+K + V N GV E +++L
Sbjct: 730 PHIKNL-VMWNPTIPYGVLEHLQQL 753
>UNIPROTKB|E9PFE0 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001611 InterPro:IPR008095 PRINTS:PR01719
PROSITE:PS51450 GO:GO:0005524 GO:GO:0006355 InterPro:IPR025875
Pfam:PF12799 EMBL:AC133065 HGNC:HGNC:7067 IPI:IPI00641977
ProteinModelPortal:E9PFE0 SMR:E9PFE0 Ensembl:ENST00000381835
UCSC:uc002dak.4 ArrayExpress:E9PFE0 Bgee:E9PFE0 Uniprot:E9PFE0
Length = 546
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
++L A F L+ L+ + +N I G++ LS F + K+L LNL+ N IT GA L
Sbjct: 394 RILTA-FSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLA 452
Query: 613 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 453 EALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 512
Query: 672 K 672
+
Sbjct: 513 R 513
>UNIPROTKB|P13489 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0006402 "mRNA catabolic process" evidence=NAS]
[GO:0008428 "ribonuclease inhibitor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045765 "regulation
of angiogenesis" evidence=IDA] [GO:0032311 "angiogenin-PRI complex"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
GO:GO:0045765 GO:GO:0008428 GO:GO:0006402 GO:GO:0032311 PDB:1A4Y
PDBsum:1A4Y InterPro:IPR003590 SMART:SM00368 EMBL:M22414
EMBL:M36717 EMBL:X13973 EMBL:AY071904 EMBL:AL161967 EMBL:BC000677
EMBL:BC003506 EMBL:BC011186 EMBL:BC011500 EMBL:BC014629
EMBL:BC024037 EMBL:BC047730 IPI:IPI00550069 PIR:A31858
RefSeq:NP_002930.2 RefSeq:NP_976317.1 RefSeq:NP_976318.1
RefSeq:NP_976319.1 RefSeq:NP_976320.1 RefSeq:NP_976321.1
RefSeq:NP_976322.1 RefSeq:NP_976323.1 UniGene:Hs.530687 PDB:1Z7X
PDB:2BEX PDB:2Q4G PDBsum:1Z7X PDBsum:2BEX PDBsum:2Q4G
ProteinModelPortal:P13489 SMR:P13489 IntAct:P13489 STRING:P13489
PhosphoSite:P13489 DMDM:132573 REPRODUCTION-2DPAGE:IPI00550069
PaxDb:P13489 PeptideAtlas:P13489 PRIDE:P13489
Ensembl:ENST00000354420 Ensembl:ENST00000356187
Ensembl:ENST00000397604 Ensembl:ENST00000397614
Ensembl:ENST00000397615 Ensembl:ENST00000438658
Ensembl:ENST00000533410 Ensembl:ENST00000534797 GeneID:6050
KEGG:hsa:6050 UCSC:uc001lpk.1 CTD:6050 GeneCards:GC11M000485
HGNC:HGNC:10074 HPA:HPA039223 HPA:HPA040781 MIM:173320
neXtProt:NX_P13489 PharmGKB:PA34447 eggNOG:NOG308334
HOGENOM:HOG000140402 HOVERGEN:HBG001059 InParanoid:P13489 KO:K16634
OMA:MEDRLQA OrthoDB:EOG4DZ1VG PhylomeDB:P13489 ChiTaRS:RNH1
EvolutionaryTrace:P13489 GenomeRNAi:6050 NextBio:23577
ArrayExpress:P13489 Bgee:P13489 CleanEx:HS_RNH1
Genevestigator:P13489 GermOnline:ENSG00000023191 Uniprot:P13489
Length = 461
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 62/244 (25%), Positives = 107/244 (43%)
Query: 461 GLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKA 520
G+ + A L EL L N G +G +A+L C I C + +K
Sbjct: 221 GIVASKASLRELALGSNKLGDVG---MAEL-----CPGLLHPSSRLRTLWIWECGITAKG 272
Query: 521 LHD-CYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHV 578
D C KE +LK N L +EGA++L + + LE + +
Sbjct: 273 CGDLCRVLRAKE----SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328
Query: 579 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGAS 637
+ S +N+ L L +++N + G L Q L + S L +L L DC + + S
Sbjct: 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 388
Query: 638 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNK-TKLKQINVSENQFGEEGVEEME 696
S+A L N +L +++L+ N + G L LV++++ L+Q+ + + + EE + ++
Sbjct: 389 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 448
Query: 697 KLMK 700
L K
Sbjct: 449 ALEK 452
>DICTYBASE|DDB_G0293920 [details] [associations]
symbol:DDB_G0293920 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293920 eggNOG:NOG239526 EMBL:AAFI02000224
RefSeq:XP_628873.1 ProteinModelPortal:Q54B43
EnsemblProtists:DDB0192196 GeneID:8629489 KEGG:ddi:DDB_G0293920
InParanoid:Q54B43 OMA:DYSQQDQ Uniprot:Q54B43
Length = 861
Score = 139 (54.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/270 (23%), Positives = 114/270 (42%)
Query: 398 DAI--NEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDA- 454
DA+ N+ LVSLN N + ++A+A+ F R + + + + A
Sbjct: 259 DALKENQTNQLVSLNCSDNRVSDKGMNSLANAIRS---FNRP-FLEFIASNVDLQSKGAS 314
Query: 455 --LRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLAD---LLRSSCCFAXXXXXXXXXXX 509
R L + +GA +V LD+S N IG E L D LL +S
Sbjct: 315 IFFRTLQSNYSSSGA-IVHLDVSRNDLEKIGSESLHDWIILLNTSIPSPRKPLVHINLEE 373
Query: 510 XITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVE 569
++ AL K+G +L+ N+ E L ++ K +L +++
Sbjct: 374 TQLDTTKVTMAL--------KQGQLESLEYINLSGNKFTPEAVANLCSIIAKCDSLAQIK 425
Query: 570 MPQNGIYHVGITALSDAFEENKNL--RHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG 627
+ + I + + +A + R L+L+ N + KGA+ Q + ++A LNL
Sbjct: 426 LSKCSITGDQVNNILNACTSGIQVHDRTLDLSSNNLEQKGALSFAQTIKSSSNIAHLNLA 485
Query: 628 DCLLKSAGASSIAKYLTDNTTLEDVNLTCN 657
+ + G + I + L +N+TL+ ++L+ N
Sbjct: 486 NNSFRKKGITFIVQALEENSTLQSIDLSSN 515
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 56/245 (22%), Positives = 103/245 (42%)
Query: 462 LQQAGARLVE-LDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKA 520
L+Q +E ++LS N F P V L ++ + C ITG ++ +
Sbjct: 385 LKQGQLESLEYINLSGNKFTPEAVANLCSII-AKC---DSLAQIKLSKCSITGDQV-NNI 439
Query: 521 LHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGI 580
L+ C + L L N LE +GA A K + + + N GI
Sbjct: 440 LNACTSGIQVHDRTLDLS-----SNNLEQKGALSFAQTIKSSSNIAHLNLANNSFRKKGI 494
Query: 581 TALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP----SLAILNLGDCLLKS--A 634
T + A EEN L+ ++L+ N + A P+ +++ S+ L L + K
Sbjct: 495 TFIVQALEENSTLQSIDLSSNFKSSSKAEPIVDHIARTVHHHVSIRKLVLAGSVSKGFYL 554
Query: 635 GAS--SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 692
G + K L ++ L +++++ N + +L +++K T LK +++ N G G
Sbjct: 555 GKELLPLVKSLVNDCKLVELDISGNNMGDDICRELFESLKKNTCLKTLHLDNNSLGLAGF 614
Query: 693 EEMEK 697
+ M++
Sbjct: 615 QAMKR 619
>ZFIN|ZDB-GENE-081028-16 [details] [associations]
symbol:si:ch211-233m11.1 "si:ch211-233m11.1"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-081028-16 GO:GO:0005524
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00690000101934
EMBL:BX571701 IPI:IPI00861537 Ensembl:ENSDART00000138143
Uniprot:F1QBA5
Length = 1057
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 76/314 (24%), Positives = 133/314 (42%)
Query: 394 KVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRAL-WKDMFTGRMKTEIP 452
+V+ + V+ S L + ++ ALS H R L +++ G + ++
Sbjct: 694 EVLQKLVPVVEASRSARLSKCDISDEGCAVLSSALSSHSSNLRELNLTEIYVGDSRVKL- 752
Query: 453 DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT 512
L L+ +L +L L + G LA LRS+ +
Sbjct: 753 -----LFAALKDPHCKLEKLMLFNCGISNEGSADLASALRSNLNLRELDLSGNKLRD--S 805
Query: 513 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMP 571
G KLLS L DC K E L++ G + +EG LA + + L +++
Sbjct: 806 GVKLLSDGLKDC----KLE----ILRLCYCG---ISDEGCAALALALRSASSNLRELDLI 854
Query: 572 QNGIYHVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGD 628
N + G+ LS + + L L L + IT KG L AL + + L L+L D
Sbjct: 855 GNRLGDSGVKLLSAGLKNPHCKLEALRLKNCGITNKGCDALASALRSVSTANLRELDLCD 914
Query: 629 CLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKAMK-NKTKLKQINVSENQ 686
L+ +G ++ L D + LE + L CN ++ DL +K N + L++++++ N+
Sbjct: 915 NRLRDSGVRLLSARLEDPHCKLEKLRL-CN-CEIEDCADLASTLKLNSSNLRELDLTGNK 972
Query: 687 FGEEGVEEMEKLMK 700
G+ GV+ + +K
Sbjct: 973 LGDSGVKLLSDGLK 986
Score = 129 (50.5 bits), Expect = 0.00026, P = 0.00026
Identities = 87/375 (23%), Positives = 149/375 (39%)
Query: 321 KVINSMVSVIPIDNPLGPAVIELNHKG-RMTDKPNDDVSDILKKLESISVESGQDSTKLS 379
+V+ +V V+ + +++ +G + S L++L + G KL
Sbjct: 694 EVLQKLVPVVEASRSARLSKCDISDEGCAVLSSALSSHSSNLRELNLTEIYVGDSRVKLL 753
Query: 380 FAG--------QGLKLDN----KEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADA 427
FA + L L N E + + A+ L L+L GN L + K ++D
Sbjct: 754 FAALKDPHCKLEKLMLFNCGISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLSDG 813
Query: 428 LSKHEHFKRALWKDMFTGRMKTEIPD-ALRYLGNGLQQAGARLVELDLSDNAFGPIGVEG 486
L + K + + + G I D L L+ A + L ELDL N G GV+
Sbjct: 814 L---KDCKLEILRLCYCG-----ISDEGCAALALALRSASSNLRELDLIGNRLGDSGVKL 865
Query: 487 LADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNR 546
L+ L++ C + C + +K D S+ + S L+ NR
Sbjct: 866 LSAGLKNPHC--------KLEALRLKNCGITNKGC-DALASALRSVSTANLRELDLCDNR 916
Query: 547 LENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITY 605
L + G ++L+A + LE++ + I A S + NLR L+L N +
Sbjct: 917 LRDSGVRLLSARLEDPHCKLEKLRLCNCEIEDCADLA-STLKLNSSNLRELDLTGNKLGD 975
Query: 606 KGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIAKYL-TDNTTLEDVNLTCNEISVQG 663
G L L L L L C + G +++A L + ++ L +++LT N + G
Sbjct: 976 SGVKLLSDGLKDAHCKLEKLRLIKCGITDEGCTALASALRSPSSNLRELDLTGNNVGDSG 1035
Query: 664 GLDLVKAMKNKTKLK 678
G L+ +K+ K
Sbjct: 1036 G-KLLSDVKDDPNCK 1049
Score = 128 (50.1 bits), Expect = 0.00033, P = 0.00033
Identities = 54/197 (27%), Positives = 90/197 (45%)
Query: 513 GCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMP 571
GC +LS AL + S+ +E L L G +R+ K+L A K LE++ +
Sbjct: 720 GCAVLSSALSS-HSSNLRE---LNLTEIYVGDSRV-----KLLFAALKDPHCKLEKLMLF 770
Query: 572 QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLL 631
GI + G L+ A N NLR L+L+ N + G L L L IL L C +
Sbjct: 771 NCGISNEGSADLASALRSNLNLRELDLSGNKLRDSGVKLLSDGLKDC-KLEILRLCYCGI 829
Query: 632 KSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA-MKNK-TKLKQINVSENQFG 688
G +++A L ++ L +++L N + G+ L+ A +KN KL+ + +
Sbjct: 830 SDEGCAALALALRSASSNLRELDLIGNRLG-DSGVKLLSAGLKNPHCKLEALRLKNCGIT 888
Query: 689 EEGVEEMEKLMKSFGMA 705
+G + + ++S A
Sbjct: 889 NKGCDALASALRSVSTA 905
>UNIPROTKB|F1LSE8 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 IPI:IPI00391658 Ensembl:ENSRNOT00000030118
Uniprot:F1LSE8
Length = 1063
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 910 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 968
Query: 612 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 670
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 969 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1028
Query: 671 MK 672
++
Sbjct: 1029 LQ 1030
>UNIPROTKB|G3V9V5 [details] [associations]
symbol:Ciita "Protein Ciita" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 EMBL:CH474017 UniGene:Rn.162013
GeneID:85483 KEGG:rno:85483 RefSeq:NP_001257732.1
Ensembl:ENSRNOT00000064827 Uniprot:G3V9V5
Length = 1073
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 920 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 978
Query: 612 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 670
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 979 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1038
Query: 671 MK 672
++
Sbjct: 1039 LQ 1040
>DICTYBASE|DDB_G0290439 [details] [associations]
symbol:gacW "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0290439 GO:GO:0005737 GO:GO:0007165 GO:GO:0005096
GO:GO:0043547 Gene3D:1.10.555.10 SUPFAM:SSF48350
GenomeReviews:CM000154_GR eggNOG:NOG295787 EMBL:AAFI02000163
RefSeq:XP_635754.1 ProteinModelPortal:Q54G18
EnsemblProtists:DDB0233787 GeneID:8627673 KEGG:ddi:DDB_G0290439
InParanoid:Q54G18 OMA:ENIAICW Uniprot:Q54G18
Length = 1115
Score = 140 (54.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 546 RLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK--NLRHLNLNDNTI 603
+L NE +LA VFK+ +L+++ + + I L ENK +L H+NLN+N++
Sbjct: 221 KLSNEDLNLLAEVFKENSSLQQLTITNSQASKEPIITLLQNVAENKALHLSHINLNNNSL 280
Query: 604 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNT----TLEDVNLTCNE 658
KG + LG ++ + L LN+ + G ++ LT N ++ +N++ N+
Sbjct: 281 ENKGILTLGSSIQTFSNGLTYLNIENTSCSGKGLEAMFGCLTANNVVCGSMTHLNISNNK 340
Query: 659 ISVQGGLDLVKAMKNKTKLKQINVS 683
+ G L K + T L+Q+ +S
Sbjct: 341 LESYGTNGLCKFLSKATALQQLLMS 365
>RGD|619813 [details] [associations]
symbol:Ciita "class II, major histocompatibility complex,
transactivator" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006954 "inflammatory response" evidence=IEP] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=IEP;IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0046677 "response to antibiotic" evidence=ISO] [GO:0071346
"cellular response to interferon-gamma" evidence=IEP]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006954 GO:GO:0045944 GO:GO:0000122 GO:GO:0071346
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
HOGENOM:HOG000107439 HOVERGEN:HBG000174 GO:GO:0045348
UniGene:Rn.162013 EMBL:AF251305 IPI:IPI00190599
ProteinModelPortal:Q9GJE0 STRING:Q9GJE0 PRIDE:Q9GJE0
UCSC:RGD:619813 InParanoid:Q9GJE0 NextBio:617566
ArrayExpress:Q9GJE0 Genevestigator:Q9GJE0 Uniprot:Q9GJE0
Length = 1153
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 1000 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 612 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 670
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 671 MK 672
++
Sbjct: 1119 LQ 1120
>UNIPROTKB|G3V6C0 [details] [associations]
symbol:Ciita "Class II, major histocompatibility complex,
transactivator, isoform CRA_c" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034341 "response to interferon-gamma" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 RGD:619813 GO:GO:0005524
GO:GO:0006355 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 KO:K08060 OMA:PQAFPKL
GeneTree:ENSGT00660000095240 EMBL:CH474017 RefSeq:NP_445981.2
UniGene:Rn.162013 Ensembl:ENSRNOT00000003572 GeneID:85483
KEGG:rno:85483 Uniprot:G3V6C0
Length = 1153
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N+IT GA L
Sbjct: 1000 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNSITDVGACKL 1058
Query: 612 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 670
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1059 AEALPALAKSLLRLSLYNNCICDEGAKSLARVLPDMVSLRVMDVQFNKFTAVGAQQLTSS 1118
Query: 671 MK 672
++
Sbjct: 1119 LQ 1120
>UNIPROTKB|E1BZ42 [details] [associations]
symbol:RSPRY1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00530000063442 CTD:89970 OMA:NINAMLN
EMBL:AADN02065767 IPI:IPI00592202 RefSeq:XP_414014.1
Ensembl:ENSGALT00000002065 GeneID:415648 KEGG:gga:415648
NextBio:20819217 Uniprot:E1BZ42
Length = 575
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW++V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 120 PPYSMITLHEMAETDEGWLEVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 174
Query: 362 KKLESISVESG 372
+KL I SG
Sbjct: 175 QKLTEILNLSG 185
>MGI|MGI:108445 [details] [associations]
symbol:Ciita "class II transactivator" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016605 "PML body"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034341 "response to interferon-gamma" evidence=ISO;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045348 "positive
regulation of MHC class II biosynthetic process" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046677 "response to antibiotic" evidence=ISO]
InterPro:IPR008095 PRINTS:PR01719 MGI:MGI:108445 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0032403 GO:GO:0045944
GO:GO:0046677 GO:GO:0006351 GO:GO:0000122 GO:GO:0044212
InterPro:IPR025875 Pfam:PF12799 GO:GO:0034341 InterPro:IPR007111
PROSITE:PS50837 CTD:4261 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
GO:GO:0045345 EMBL:AF000006 EMBL:AF000007 EMBL:AF042158
EMBL:AF042159 EMBL:AF100709 EMBL:AF100710 EMBL:U60653 EMBL:U46562
IPI:IPI00108982 IPI:IPI00115417 IPI:IPI00742270
RefSeq:NP_001230690.1 RefSeq:NP_031601.1 UniGene:Mm.249560
ProteinModelPortal:P79621 SMR:P79621 STRING:P79621
PhosphoSite:P79621 PRIDE:P79621 DNASU:12265
Ensembl:ENSMUST00000023147 GeneID:12265 KEGG:mmu:12265
UCSC:uc007ydr.1 UCSC:uc007yds.1 InParanoid:P79621 NextBio:280710
Bgee:P79621 CleanEx:MM_CIITA Genevestigator:P79621
GermOnline:ENSMUSG00000022504 Uniprot:P79621
Length = 1155
Score = 139 (54.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 552 AKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPL 611
AK+L A F L+ L+ + +N I G++ LS F + K L LNL+ N IT GA L
Sbjct: 1002 AKILPA-FSSLQHLDLDSLSENKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKL 1060
Query: 612 GQALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKA 670
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L +
Sbjct: 1061 AEALPALAKSLLRLSLYNNCICDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASS 1120
Query: 671 MK 672
++
Sbjct: 1121 LQ 1122
Score = 135 (52.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 603
N++ ++G L+A F +LK LE + + QN I VG L++A K+L L+L +N I
Sbjct: 1022 NKIGDKGVSKLSATFPQLKALETLNLSQNNITDVGACKLAEALPALAKSLLRLSLYNNCI 1081
Query: 604 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYL 643
KGA L Q L + SL ++++ +AGA +A L
Sbjct: 1082 CDKGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSL 1121
>DICTYBASE|DDB_G0285563 [details] [associations]
symbol:DDB_G0285563 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285563 EMBL:AAFI02000079 eggNOG:KOG4308
RefSeq:XP_638127.1 ProteinModelPortal:Q54N16
EnsemblProtists:DDB0304945 GeneID:8625176 KEGG:ddi:DDB_G0285563
InParanoid:Q54N16 OMA:SNHIGDE Uniprot:Q54N16
Length = 283
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 583 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKY 642
+S + E N + +N + I L + L K S+ L+ + + GA +IA
Sbjct: 136 ISMSLETNSTILSMNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANM 195
Query: 643 LTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGV 692
L N ++E +NL+ NEI QG + + +K + ++N+S N G+EGV
Sbjct: 196 LKVNKSIETINLSNNEIGNQGAMSMADILKTTKRNVKLNLSSNHIGDEGV 245
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 565 LERVEMP-QNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI 623
LE + +P + + ++ E + L L+ ++ I K A + +L ++
Sbjct: 89 LENLLIPYKQSVLDQAFLSIQQIIENSTTLTTLDFSNIEIDKKRASLISMSLETNSTILS 148
Query: 624 LNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVS 683
+N C L + + + L N ++ +++ N+I QG L + +K ++ IN+S
Sbjct: 149 MNFEYCYLDNDSIIQLCRGLEKNKSIIELDFNNNKIGPQGALAIANMLKVNKSIETINLS 208
Query: 684 ENQFGEEGVEEMEKLMKS 701
N+ G +G M ++K+
Sbjct: 209 NNEIGNQGAMSMADILKT 226
>UNIPROTKB|P33076 [details] [associations]
symbol:CIITA "MHC class II transactivator" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0016605 "PML body" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0046677 "response to antibiotic" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0060333
"interferon-gamma-mediated signaling pathway" evidence=TAS]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045348 "positive regulation of MHC class II biosynthetic
process" evidence=IC] [GO:0034341 "response to interferon-gamma"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0032966 "negative regulation of collagen
biosynthetic process" evidence=IC] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR001611
InterPro:IPR008095 PRINTS:PR01719 PROSITE:PS51450 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0005654 GO:GO:0060333 GO:GO:0032403
GO:GO:0045944 GO:GO:0046677 GO:GO:0032966 GO:GO:0006351
EMBL:CH471112 GO:GO:0000122 GO:GO:0044212 GO:GO:0003713
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR007111 PROSITE:PS50837
EMBL:X74301 EMBL:U18259 EMBL:AC133065 IPI:IPI00186224 PIR:A48843
RefSeq:NP_000237.2 UniGene:Hs.701991 ProteinModelPortal:P33076
SMR:P33076 IntAct:P33076 STRING:P33076 PhosphoSite:P33076
DMDM:218511957 PaxDb:P33076 PRIDE:P33076 DNASU:4261
Ensembl:ENST00000324288 GeneID:4261 KEGG:hsa:4261 UCSC:uc002dag.2
CTD:4261 GeneCards:GC16P010879 HGNC:HGNC:7067 HPA:CAB016084
MIM:209920 MIM:600005 neXtProt:NX_P33076 Orphanet:572
PharmGKB:PA30795 eggNOG:NOG269671 HOGENOM:HOG000107439
HOVERGEN:HBG000174 KO:K08060 OMA:PQAFPKL OrthoDB:EOG48PMJD
PhylomeDB:P33076 GenomeRNAi:4261 NextBio:16805 ArrayExpress:P33076
Bgee:P33076 CleanEx:HS_CIITA Genevestigator:P33076
GermOnline:ENSG00000179583 GO:GO:0045345 GO:GO:0045348
Uniprot:P33076
Length = 1130
Score = 138 (53.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/121 (32%), Positives = 65/121 (53%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
++L A F L+ L+ + +N I G++ LS F + K+L LNL+ N IT GA L
Sbjct: 978 RILTA-FSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLA 1036
Query: 613 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
+AL L SL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1037 EALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASL 1096
Query: 672 K 672
+
Sbjct: 1097 R 1097
>UNIPROTKB|F1MG35 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046677 "response to antibiotic" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045345 "positive
regulation of MHC class I biosynthetic process" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524 GO:GO:0045944
GO:GO:0046677 GO:GO:0000122 GO:GO:0044212 InterPro:IPR025875
Pfam:PF12799 GO:GO:0034341 InterPro:IPR007111 PROSITE:PS50837
OMA:PQAFPKL GO:GO:0045345 GeneTree:ENSGT00660000095240
EMBL:DAAA02057466 EMBL:DAAA02057467 EMBL:DAAA02057468
EMBL:DAAA02057469 EMBL:DAAA02057470 IPI:IPI01001017
Ensembl:ENSBTAT00000027518 Uniprot:F1MG35
Length = 1162
Score = 138 (53.6 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
K+L A F L+ L+ + +N I G+ LS F + K L LNL+ N IT GA L
Sbjct: 1010 KILEA-FTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLA 1068
Query: 613 QALSKLP-SLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
+AL L SL L+L + + AGA S+A L D +L +++ N+ + G L +
Sbjct: 1069 EALPALATSLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLAAGL 1128
Query: 672 KNKTKLKQI 680
+ ++K +
Sbjct: 1129 RKCPQVKTL 1137
Score = 126 (49.4 bits), Expect = 0.00062, P = 0.00062
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 545 NRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEE-NKNLRHLNLNDNTI 603
N++ +EG L+A F +LK LE + + QN I VG L++A +L L+L +N I
Sbjct: 1029 NKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAEALPALATSLLRLSLYNNCI 1088
Query: 604 TYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIA 640
GA L AL + SL +L++ +AGA +A
Sbjct: 1089 CDAGAESLAHALPDMVSLRVLDVQYNKFTAAGAQQLA 1125
>UNIPROTKB|F1RMK8 [details] [associations]
symbol:LOC100622751 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:QEVWLLI
EMBL:FP102565 Ensembl:ENSSSCT00000003680 Uniprot:F1RMK8
Length = 1178
Score = 138 (53.6 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 75/298 (25%), Positives = 128/298 (42%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L SL+L GN + + K + DAL + L K + G D+ + L + L +
Sbjct: 875 LKSLSLAGNKVTDPSIKPLCDALRSTQC---TLQK-LILGDCGLTAADS-QDLASALTK- 928
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
L L L+ N+ G GV L ++ C + + GC L+ AL
Sbjct: 929 NQSLTHLYLASNSLGSEGVNLLGRAMKLPNC-SLQRLILNACNLDVAGCGFLAFAL---- 983
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALS 584
+ + L+L V N LE++G K+L V + L+ +E+ + + +LS
Sbjct: 984 -MGNRRLTHLSLSV-----NPLEDDGMKLLCEVMMEPSCHLQDLELVKCQLTATCCKSLS 1037
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 644
NK+L+ L+L N + G L + L + SL L L C L S +++ L+
Sbjct: 1038 HVITRNKHLQSLDLAANALGDNGIEVLCEGLKQKNSLRRLGLEACELTSGCCEALSSALS 1097
Query: 645 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG---VEEMEKL 698
+ L +NL N S+ G L A T L+ + + + Q+ + +EE+++L
Sbjct: 1098 GSEHLTSLNLMQNNFSLGGMTKLCSAFAQPTCDLQMLGLWKWQYPAQMRRLLEELQRL 1155
Score = 128 (50.1 bits), Expect = 0.00038, P = 0.00038
Identities = 42/129 (32%), Positives = 61/129 (47%)
Query: 546 RLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTIT 604
RL+ E M K LE + + + G+ H ALS + +L+ L+L N +T
Sbjct: 827 RLKEEDVVMACEAIKHPNCQLESLRLDRCGLTHSSCLALSQVLVTSVSLKSLSLAGNKVT 886
Query: 605 YKGAIPLGQAL-SKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQG 663
PL AL S +L L LGDC L +A + +A LT N +L + L N + +G
Sbjct: 887 DPSIKPLCDALRSTQCTLQKLILGDCGLTAADSQDLASALTKNQSLTHLYLASNSLGSEG 946
Query: 664 GLDLVKAMK 672
L +AMK
Sbjct: 947 VNLLGRAMK 955
>UNIPROTKB|F1PS97 [details] [associations]
symbol:NLRP8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
OMA:DIFAKMN EMBL:AAEX03000720 Ensembl:ENSCAFT00000003948
Uniprot:F1PS97
Length = 1028
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 545 NRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI 603
N L++EGAK L + + + L+R+ + + ++ A +NKNLR L+L N++
Sbjct: 889 NALKDEGAKQLCSALQHPMCPLQRLVLRNCALTSDCCQDMASALGKNKNLRSLDLGFNSL 948
Query: 604 TYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
G L +AL K S L IL L CL S ++A L N +L ++++ N+I ++
Sbjct: 949 KDDGVTLLFEALKKSESGLQILELERCLFTSLCCQAMASMLLHNQSLRYLDVSKNDIGLR 1008
Query: 663 GGLDLVKAMK-NKTKLKQI 680
G L L +A + +K K K +
Sbjct: 1009 GILLLREAFQQHKWKKKVV 1027
>UNIPROTKB|Q9HC29 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0002227 "innate immune
response in mucosa" evidence=IEA] [GO:0002282 "microglial cell
activation involved in immune response" evidence=IEA] [GO:0002381
"immunoglobulin production involved in immunoglobulin mediated
immune response" evidence=IEA] [GO:0002710 "negative regulation of
T cell mediated immunity" evidence=IEA] [GO:0002732 "positive
regulation of dendritic cell cytokine production" evidence=IEA]
[GO:0002862 "negative regulation of inflammatory response to
antigenic stimulus" evidence=IEA] [GO:0002925 "positive regulation
of humoral immune response mediated by circulating immunoglobulin"
evidence=IEA] [GO:0006965 "positive regulation of biosynthetic
process of antibacterial peptides active against Gram-positive
bacteria" evidence=IEA] [GO:0007584 "response to nutrient"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032496 "response
to lipopolysaccharide" evidence=IEA] [GO:0032689 "negative
regulation of interferon-gamma production" evidence=IEA]
[GO:0032695 "negative regulation of interleukin-12 production"
evidence=IEA] [GO:0032701 "negative regulation of interleukin-18
production" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=IEA] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IEA]
[GO:0032735 "positive regulation of interleukin-12 production"
evidence=IEA] [GO:0034136 "negative regulation of toll-like
receptor 2 signaling pathway" evidence=IEA] [GO:0043330 "response
to exogenous dsRNA" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IEA] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0050766 "positive regulation of phagocytosis" evidence=IEA]
[GO:0050830 "defense response to Gram-positive bacterium"
evidence=IEA] [GO:0052033 "pathogen-associated molecular pattern
dependent induction by symbiont of host innate immune response"
evidence=IEA] [GO:0071224 "cellular response to peptidoglycan"
evidence=IEA] [GO:0071608 "macrophage inflammatory protein-1 alpha
production" evidence=IEA] [GO:0090022 "regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA;TAS]
[GO:0050700 "CARD domain binding" evidence=IPI] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0009986 "cell surface"
evidence=IDA] [GO:0032740 "positive regulation of interleukin-17
production" evidence=IMP] [GO:0045087 "innate immune response"
evidence=NAS;TAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0002367 "cytokine production involved in immune response"
evidence=IMP] [GO:0032498 "detection of muramyl dipeptide"
evidence=IDA] [GO:0032760 "positive regulation of tumor necrosis
factor production" evidence=IMP;IDA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0070431 "nucleotide-binding oligomerization domain containing 2
signaling pathway" evidence=IDA] [GO:0006952 "defense response"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0009595
"detection of biotic stimulus" evidence=TAS] [GO:0042834
"peptidoglycan binding" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=TAS] [GO:0032495 "response to muramyl
dipeptide" evidence=IDA] [GO:0032500 "muramyl dipeptide binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016045 "detection of bacterium" evidence=IDA] [GO:0031982
"vesicle" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0042742 "defense response to bacterium" evidence=IDA]
[GO:0035556 "intracellular signal transduction" evidence=IDA]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=IDA] [GO:0000187 "activation of MAPK activity"
evidence=TAS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=TAS] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0002756 "MyD88-independent
toll-like receptor signaling pathway" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling pathway"
evidence=TAS] [GO:0034130 "toll-like receptor 1 signaling pathway"
evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling pathway"
evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling pathway"
evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=TAS] [GO:0035666 "TRIF-dependent toll-like receptor
signaling pathway" evidence=TAS] [GO:0035872 "nucleotide-binding
domain, leucine rich repeat containing receptor signaling pathway"
evidence=TAS] [GO:0051403 "stress-activated MAPK cascade"
evidence=TAS] [GO:0070423 "nucleotide-binding oligomerization
domain containing signaling pathway" evidence=TAS] [GO:0032733
"positive regulation of interleukin-10 production" evidence=ISS]
[GO:0035419 "activation of MAPK activity involved in innate immune
response" evidence=ISS] [GO:0043552 "positive regulation of
phosphatidylinositol 3-kinase activity" evidence=ISS] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=ISS]
[GO:0051353 "positive regulation of oxidoreductase activity"
evidence=ISS] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISS] [GO:0060585 "positive
regulation of prostaglandin-endoperoxide synthase activity"
evidence=ISS] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISS] [GO:2000110 "negative regulation of
macrophage apoptotic process" evidence=ISS] [GO:0002606 "positive
regulation of dendritic cell antigen processing and presentation"
evidence=ISS] [GO:0046645 "positive regulation of gamma-delta T
cell activation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0002830 "positive
regulation of type 2 immune response" evidence=IMP] [GO:2000363
"positive regulation of prostaglandin-E synthase activity"
evidence=ISS] [GO:0050871 "positive regulation of B cell
activation" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IMP] [GO:0050727
"regulation of inflammatory response" evidence=IC] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
Reactome:REACT_6782 InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0051259 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
Reactome:REACT_6900 GO:GO:0009986 GO:GO:0016045 GO:GO:0002381
GO:GO:0032689 GO:GO:0002862 GO:GO:0050830 GO:GO:0007254
GO:GO:0043123 GO:GO:0042742 Orphanet:206 GO:GO:0032496
GO:GO:0070374 GO:GO:0046330 GO:GO:0045087 GO:GO:0032755
GO:GO:0045747 GO:GO:0050731 GO:GO:0050766 GO:GO:0050727
GO:GO:0032720 GO:GO:0044130 GO:GO:0035419 GO:GO:0051092
GO:GO:0031398 GO:GO:0032088 GO:GO:0050718 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982 GO:GO:0006965
GO:GO:0002227 GO:GO:0042834 GO:GO:0032695 GO:GO:0032760
GO:GO:0002755 GO:GO:0008063 GO:GO:0034130 GO:GO:0034134
GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0050679
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043330 GO:GO:0002606
GO:GO:0032735 GO:GO:0043552 GO:GO:0051770 GO:GO:2000110
GO:GO:0032733 GO:GO:0002830 GO:GO:0032703 GO:GO:0060585
GO:GO:0090022 GO:GO:0002925 GO:GO:0070431 GO:GO:0032740
Orphanet:771 GO:GO:0050871 GO:GO:0034136 CTD:64127 eggNOG:NOG248107
HOGENOM:HOG000113814 KO:K10165 OrthoDB:EOG4WM4T6 GO:GO:0032500
GO:GO:0071224 GO:GO:0002367 GO:GO:0032498 GO:GO:0071608
GO:GO:0032701 GO:GO:0002710 GO:GO:0046645 GO:GO:2000363
EMBL:AF178930 EMBL:AF385089 EMBL:AF385090 EMBL:AJ303140
IPI:IPI00005559 IPI:IPI00759531 RefSeq:NP_071445.1
UniGene:Hs.592072 ProteinModelPortal:Q9HC29 SMR:Q9HC29
DIP:DIP-41998N MINT:MINT-151071 STRING:Q9HC29 PhosphoSite:Q9HC29
DMDM:20137973 PaxDb:Q9HC29 PRIDE:Q9HC29 DNASU:64127
Ensembl:ENST00000300589 GeneID:64127 KEGG:hsa:64127 UCSC:uc002egl.1
GeneCards:GC16P050729 HGNC:HGNC:5331 MIM:186580 MIM:266600
MIM:605956 MIM:609464 neXtProt:NX_Q9HC29 Orphanet:90340
Orphanet:90341 PharmGKB:PA26074 HOVERGEN:HBG050792
InParanoid:Q9HC29 OMA:QYECDEI PhylomeDB:Q9HC29 BindingDB:Q9HC29
ChEMBL:CHEMBL1293266 GenomeRNAi:64127 NextBio:66012
ArrayExpress:Q9HC29 Bgee:Q9HC29 CleanEx:HS_NOD2
Genevestigator:Q9HC29 GermOnline:ENSG00000167207 Uniprot:Q9HC29
Length = 1040
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 65/244 (26%), Positives = 111/244 (45%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 524
R V L L N+ G IGVE L L + + C L + L
Sbjct: 791 RPVALQLDYNSVGDIGVEQLLPCLGVCKALYLRDNNISDRGICKLIECALHCEQLQKLAL 850
Query: 525 YESSKKEGSP------LALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 574
+ + +G LA + F+A G N + GA++LA + +L+ + N
Sbjct: 851 FNNKLTDGCAHSMAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFLGFWGNR 910
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 634
+ G AL++A ++++LR L+L N I GA L L+K L L L + L+
Sbjct: 911 VGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDE 970
Query: 635 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 694
G S+A+ L N++L+ + L+ N I+ G L++A++ + ++ + N F +EE
Sbjct: 971 GVCSLAEGLKKNSSLKILKLSNNCITYLGAEALLQALERNDTILEVWLRGNTFS---LEE 1027
Query: 695 MEKL 698
++KL
Sbjct: 1028 VDKL 1031
>UNIPROTKB|A4IFG8 [details] [associations]
symbol:RSPRY1 "RSPRY1 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 eggNOG:NOG303191
GeneTree:ENSGT00530000063442 CTD:89970 HOGENOM:HOG000261619
HOVERGEN:HBG057205 OMA:NINAMLN OrthoDB:EOG4QFWCZ EMBL:DAAA02046510
EMBL:DAAA02046511 EMBL:BC134575 IPI:IPI00705113
RefSeq:NP_001077203.1 UniGene:Bt.9244 Ensembl:ENSBTAT00000006361
GeneID:538571 KEGG:bta:538571 InParanoid:A4IFG8 NextBio:20877448
Uniprot:A4IFG8
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>UNIPROTKB|E2RSA4 [details] [associations]
symbol:RSPRY1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00530000063442 CTD:89970 OMA:NINAMLN
EMBL:AAEX03001577 RefSeq:XP_862758.2 ProteinModelPortal:E2RSA4
Ensembl:ENSCAFT00000013986 GeneID:478112 KEGG:cfa:478112
NextBio:20853484 Uniprot:E2RSA4
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>UNIPROTKB|Q96DX4 [details] [associations]
symbol:RSPRY1 "RING finger and SPRY domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005576
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 eggNOG:NOG303191
EMBL:AB075852 EMBL:AY358548 EMBL:AK172845 EMBL:BC013173
EMBL:AL834402 IPI:IPI00061267 IPI:IPI00643431 RefSeq:NP_588609.1
UniGene:Hs.460885 ProteinModelPortal:Q96DX4 SMR:Q96DX4
IntAct:Q96DX4 STRING:Q96DX4 PhosphoSite:Q96DX4 DMDM:74731506
PaxDb:Q96DX4 PRIDE:Q96DX4 DNASU:89970 Ensembl:ENST00000394420
Ensembl:ENST00000537866 GeneID:89970 KEGG:hsa:89970 UCSC:uc002elb.3
UCSC:uc002ele.1 CTD:89970 GeneCards:GC16P057220 HGNC:HGNC:29420
HPA:HPA003729 neXtProt:NX_Q96DX4 PharmGKB:PA143485602
HOGENOM:HOG000261619 HOVERGEN:HBG057205 InParanoid:Q96DX4
OMA:NINAMLN OrthoDB:EOG4QFWCZ PhylomeDB:Q96DX4 ChiTaRS:RSPRY1
GenomeRNAi:89970 NextBio:76466 Bgee:Q96DX4 CleanEx:HS_RSPRY1
Genevestigator:Q96DX4 Uniprot:Q96DX4
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>UNIPROTKB|F1RF31 [details] [associations]
symbol:RSPRY1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00530000063442 OMA:NINAMLN EMBL:FP102873
RefSeq:XP_003127018.1 Ensembl:ENSSSCT00000003120 GeneID:100515835
KEGG:ssc:100515835 Uniprot:F1RF31
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>MGI|MGI:1914860 [details] [associations]
symbol:Rspry1 "ring finger and SPRY domain containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1914860 Prosite:PS00518 GO:GO:0005576
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 eggNOG:NOG303191
GeneTree:ENSGT00530000063442 CTD:89970 HOVERGEN:HBG057205
OMA:NINAMLN OrthoDB:EOG4QFWCZ ChiTaRS:RSPRY1 EMBL:AK173313
EMBL:AK013003 EMBL:AK031153 EMBL:AK032416 EMBL:AK076799
EMBL:AK134544 EMBL:AK141443 EMBL:AK146028 EMBL:AK150941
EMBL:AK152435 EMBL:AK166167 EMBL:AK172567 EMBL:BC010833
EMBL:BC054121 IPI:IPI00223590 IPI:IPI00654218 IPI:IPI00828718
RefSeq:NP_080550.3 UniGene:Mm.109074 ProteinModelPortal:Q8BVR6
SMR:Q8BVR6 IntAct:Q8BVR6 STRING:Q8BVR6 PhosphoSite:Q8BVR6
PRIDE:Q8BVR6 Ensembl:ENSMUST00000060389 Ensembl:ENSMUST00000121101
GeneID:67610 KEGG:mmu:67610 UCSC:uc009mwq.2 UCSC:uc009mwr.2
InParanoid:Q8BVR6 NextBio:325045 Bgee:Q8BVR6 CleanEx:MM_RSPRY1
Genevestigator:Q8BVR6 Uniprot:Q8BVR6
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>RGD|1308847 [details] [associations]
symbol:Rspry1 "ring finger and SPRY domain containing 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 RGD:1308847 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 IPI:IPI00764977
Ensembl:ENSRNOT00000061227 UCSC:RGD:1308847 ArrayExpress:E9PTX4
Uniprot:E9PTX4
Length = 576
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 302 PPEVLLKLHTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDIL 361
PP ++ LH +A+ +EGW+ V+ S++ VIP+++PLGPAVI L + D+ D L
Sbjct: 121 PPYSMITLHEMAETDEGWLDVVQSLIRVIPLEDPLGPAVITL-----LLDECPLPTKDAL 175
Query: 362 KKLESISVESGQ 373
+KL I +G+
Sbjct: 176 QKLTEILNLNGE 187
>UNIPROTKB|Q53B88 [details] [associations]
symbol:NOD2 "Nucleotide-binding oligomerization
domain-containing protein 2" species:9580 "Hylobates lar"
[GO:0002367 "cytokine production involved in immune response"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0016045 "detection of bacterium" evidence=ISS]
[GO:0019899 "enzyme binding" evidence=ISS] [GO:0019901 "protein
kinase binding" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032495 "response to muramyl dipeptide" evidence=ISS]
[GO:0032498 "detection of muramyl dipeptide" evidence=ISS]
[GO:0032500 "muramyl dipeptide binding" evidence=ISS] [GO:0032740
"positive regulation of interleukin-17 production" evidence=ISS]
[GO:0035556 "intracellular signal transduction" evidence=ISS]
[GO:0042742 "defense response to bacterium" evidence=ISS]
[GO:0042834 "peptidoglycan binding" evidence=ISS] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISS] [GO:0050700 "CARD domain binding" evidence=ISS]
[GO:0050718 "positive regulation of interleukin-1 beta secretion"
evidence=ISS] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISS] [GO:0008180
"signalosome" evidence=ISS] InterPro:IPR001611 InterPro:IPR001315
Pfam:PF00619 PROSITE:PS50209 PROSITE:PS51450 SMART:SM00114
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0019901
GO:GO:0009986 GO:GO:0016045 GO:GO:0042981 GO:GO:0035556
GO:GO:0043123 GO:GO:0042742 GO:GO:0051092 GO:GO:0050718
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0031982
GO:GO:0042834 GO:GO:0050700 InterPro:IPR007111 PROSITE:PS50837
GO:GO:0032740 GO:GO:0032500 GO:GO:0002367 GO:GO:0032498
HOVERGEN:HBG050792 EMBL:AY594161 EMBL:AY594150 EMBL:AY594151
EMBL:AY594152 EMBL:AY594153 EMBL:AY594154 EMBL:AY594155
EMBL:AY594156 EMBL:AY594157 EMBL:AY594158 EMBL:AY594159
EMBL:AY594160 ProteinModelPortal:Q53B88 Uniprot:Q53B88
Length = 1040
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 64/244 (26%), Positives = 111/244 (45%)
Query: 468 RLVELDLSDNAFGPIGVEGLADLLR-SSCCFAXXXXXXXXXXXXITGCKLLSKALHDC-- 524
R V L L N+ G IGVE L L + + C L + L
Sbjct: 791 RPVALQLDYNSVGDIGVEQLLPCLGVCKALYLRDNNISDRGICKLIECALHCEQLQKLVL 850
Query: 525 YESSKKEGSP------LALKV-FIA---GRNRLENEGAKMLAAVFKKLKTLERVEMPQNG 574
+ + +G LA + F+A G N + GA++LA + +L+ + N
Sbjct: 851 FNNKLTDGCAHSMAKLLACRQNFLALRLGNNHITPAGAQVLAEGLRGNTSLQFLGFWGNR 910
Query: 575 IYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSA 634
+ G AL++A ++++LR L+L N I GA L L+K L L L + ++
Sbjct: 911 VGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHIQDE 970
Query: 635 GASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEE 694
G S+A+ L N++L+ + L+ N I+ G L++A++ + ++ + N F +EE
Sbjct: 971 GVCSLAEGLKKNSSLKILKLSNNCITYLGAKALLQALERNDTILEVWLRGNIFS---LEE 1027
Query: 695 MEKL 698
++KL
Sbjct: 1028 VDKL 1031
>MGI|MGI:2676630 [details] [associations]
symbol:Nlrp12 "NLR family, pyrin domain containing 12"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008588
"release of cytoplasmic sequestered NF-kappaB" evidence=ISO]
[GO:0009968 "negative regulation of signal transduction"
evidence=ISO] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=ISO] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=ISO] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO] [GO:0043281 "regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=ISO] [GO:0045409 "negative
regulation of interleukin-6 biosynthetic process" evidence=ISO]
[GO:0045751 "negative regulation of Toll signaling pathway"
evidence=ISO] [GO:0050710 "negative regulation of cytokine
secretion" evidence=ISO] [GO:0050711 "negative regulation of
interleukin-1 secretion" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2676630 GO:GO:0005524
GO:GO:0005737 GO:GO:0050728 GO:GO:0043124 GO:GO:0031953
GO:GO:0032088 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 GeneTree:ENSGT00700000104141 CTD:91662 GO:GO:0045751
EMBL:CAAA01093162 EMBL:CAAA01093166 EMBL:CAAA01193276 EMBL:AK149454
IPI:IPI00750318 RefSeq:NP_001028603.1 UniGene:Mm.277152
ProteinModelPortal:E9Q5R7 SMR:E9Q5R7 PRIDE:E9Q5R7
Ensembl:ENSMUST00000108653 GeneID:378425 KEGG:mmu:378425
OMA:YISCREL NextBio:400959 Bgee:E9Q5R7 Uniprot:E9Q5R7
Length = 1054
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 465 AGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDC 524
A L+ LDLSDN+ G G+E L + L+ C + C LL A
Sbjct: 761 ANRNLIRLDLSDNSIGVPGLELLCEGLQHPRC--------RLQMIQLRKC-LLEAAAGRS 811
Query: 525 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALS 584
S S L +++ + G N LE+ G K+L + + R+ I H+G +
Sbjct: 812 LASVLSNNSYL-VELDLTG-NPLEDSGLKLLCQGLRH--PVCRLRTLWLKICHLGQASCE 867
Query: 585 D---AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSAGASSIA 640
D + N++L L+L N + G + L + LS L L LG C L S IA
Sbjct: 868 DLASTLKMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLGSVACVGIA 927
Query: 641 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 699
L NT L++++L+ N++ +G L + ++++T +L+++ + + E++ ++
Sbjct: 928 SVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLSSIL 987
>UNIPROTKB|F1NYZ9 [details] [associations]
symbol:F1NYZ9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0043549 "regulation of kinase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0045345 "positive regulation of MHC class I biosynthetic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0060335
"positive regulation of interferon-gamma-mediated signaling
pathway" evidence=IEA] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IEA] [GO:0060340
"positive regulation of type I interferon-mediated signaling
pathway" evidence=IEA] GO:GO:0005829 GO:GO:0005634 GO:GO:0045944
GO:GO:0045087 GO:GO:0032088 GO:GO:0000979 GO:GO:0043549
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339
GO:GO:0060340 GO:GO:0060335 OMA:EILLSWN
GeneTree:ENSGT00660000095240 EMBL:AADN02065764 IPI:IPI00597693
Ensembl:ENSGALT00000001908 Uniprot:F1NYZ9
Length = 1698
Score = 124 (48.7 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 33/101 (32%), Positives = 55/101 (54%)
Query: 589 ENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTT 648
E +L+ L LN N+I G L +ALS + + +NLG + G +IA L +
Sbjct: 1587 EMPSLKRLILNHNSIGDDGCSRLAEALSSMHCMEEINLGHNKIGDLGLINIAAVLLEMQN 1646
Query: 649 LEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGE 689
L+ ++L+ N S GG L++A+ N L+++ +S N FG+
Sbjct: 1647 LKRIDLSGNCPSPAGGEKLMEALANCKHLEELILSRNDFGD 1687
Score = 54 (24.1 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 464 QAGARLVELDLSDNAFGPIGVEGLADLLRS-SCCFAXXXXXXXXXXXXITGCKLLSKALH 522
Q+ L E+DLSDN G EG + LL + S +TG L KA++
Sbjct: 887 QSCPHLSEVDLSDNKLGD---EGCSFLLENLSWISISKQLNLSHNLLSVTGIYSLLKAVN 943
Query: 523 DC 524
C
Sbjct: 944 TC 945
Score = 53 (23.7 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 29/110 (26%), Positives = 49/110 (44%)
Query: 369 VESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADAL 428
+ SGQD T L FAG L D E ++ + V+ L+ G + A A++ L
Sbjct: 681 INSGQDVTHLDFAGCPLDTDCLE----MLASCRNVE---HLSFRSRRFGDDFAAALSKGL 733
Query: 429 SKHEHFKRALWKDMFTGRMKTE-IPDALRYLGNGLQQAGARLVELDLSDN 477
+ K+ ++ G + + D ++ L + LQ L E++L DN
Sbjct: 734 GEMGSLKKL---EVTGGSITAAGLTDMVQALSHCLQ-----LEEINLQDN 775
Score = 51 (23.0 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 276 LMDEKKTLVIK---VPISGFLNGEVETFVPPEVLLKLHTIADQEEGWIK----VINSMVS 328
L +E KT ++ + +SG + E TF+ +LL A+Q E W++ I +
Sbjct: 572 LRNEAKTGFMESFHIFLSGLSSKECRTFI---MLL-----AEQSEAWVQDKQDAILQSLK 623
Query: 329 VIPIDNPLGPAVIELNH 345
+ GP VIEL H
Sbjct: 624 KLAATQLTGPKVIELCH 640
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 383 QGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIA 425
Q ++ N D K +++ + ++ L ++L N+L +NA +A
Sbjct: 773 QDNRIQNP-DVKTVMELFSRMEKLKKIDLSKNSLSLNAVLLLA 814
Score = 49 (22.3 bits), Expect = 0.00065, Sum P(4) = 0.00065
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 358 SDILKKLESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLG 417
SD L+KL ++ E G S +L + L ++ A+++ + +K L SL L N L
Sbjct: 1011 SD-LEKLCAVLKECGSIS-ELDPSLSNNYLGDEGLAQLL-QFLPNLKTLRSLKLNNNHLS 1067
Query: 418 VNAAKAIADALSKHEHFK 435
+++ +A +L EH +
Sbjct: 1068 LSSVFCLAQSLCTLEHLE 1085
Score = 46 (21.3 bits), Expect = 0.00052, Sum P(4) = 0.00052
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 452 PDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSC 495
P+ + L L Q +L E+DL NA +E L L C
Sbjct: 1148 PEDVTRLCQMLMQC-TQLTEIDLCGNALNDQSIERLLSFLPHFC 1190
>MGI|MGI:2387183 [details] [associations]
symbol:Lrrc45 "leucine rich repeat containing 45"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005813 "centrosome" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2387183 GO:GO:0005813
EMBL:CH466558 EMBL:AL663030 GeneTree:ENSGT00640000091171 CTD:201255
eggNOG:NOG327240 HOGENOM:HOG000231243 HOVERGEN:HBG080193
OMA:SDHREAL OrthoDB:EOG4W0XD0 ChiTaRS:LRRC45 EMBL:AK153361
EMBL:BC023296 IPI:IPI00229879 RefSeq:NP_705773.2 UniGene:Mm.347545
ProteinModelPortal:Q8CIM1 SMR:Q8CIM1 PhosphoSite:Q8CIM1
PRIDE:Q8CIM1 Ensembl:ENSMUST00000026139 GeneID:217366
KEGG:mmu:217366 InParanoid:A2AC12 NextBio:375819 Bgee:Q8CIM1
CleanEx:MM_LRRC45 Genevestigator:Q8CIM1
GermOnline:ENSMUSG00000025145 Uniprot:Q8CIM1
Length = 670
Score = 133 (51.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 47/188 (25%), Positives = 86/188 (45%)
Query: 514 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 573
C+ L K LH KE LK + L EG+ +L +++ +++ N
Sbjct: 47 CRALGKLLH-------KE---TLLKELVLSDCMLSEEGSTLLFQGLCANTSVQHLDLKGN 96
Query: 574 GIYHVGITALSDAFEENKNLRHLNLNDNTI-TYKGAIP-LGQALSKLPSLAILNLGDCLL 631
+ G AL +NK+++ L L N + T++ A L+ +L L+L + +
Sbjct: 97 NLRATGAEALGKLLRQNKSIQSLTLEWNNLGTWEDAFATFCGGLAANSALRQLDLRNNQI 156
Query: 632 KSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
GA +A L NTTL+ ++L N I + GG LV + + L +++++ N +
Sbjct: 157 SHKGAEELALALKGNTTLQQLDLRWNNIGLLGGRALVNCLPSNRTLWKLDLAGNNIPGDI 216
Query: 692 VEEMEKLM 699
+ +E+ M
Sbjct: 217 LRAVEQAM 224
>ZFIN|ZDB-GENE-070912-120 [details] [associations]
symbol:si:ch211-156p11.1 "si:ch211-156p11.1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-070912-120
GO:GO:0005524 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000101971 EMBL:BX927329 EMBL:CR936376
IPI:IPI00868161 Ensembl:ENSDART00000105988 Bgee:F1R8I8
Uniprot:F1R8I8
Length = 871
Score = 134 (52.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 70/282 (24%), Positives = 122/282 (43%)
Query: 390 KEDAKVIVDAI-NEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHF--KRALWKDMFTGR 446
++ +++ A+ + L L+L N L + K ++D L H+ K L K T +
Sbjct: 604 EQQCEILTSALKSNPSHLRELDLSQNKLE-SGVKNLSDLLKNHQCKLEKLNLCKCSIT-K 661
Query: 447 MKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXX 506
+ EI L + L+ + L ELDLS+N G+ L D+L+ S C
Sbjct: 662 EQCEI------LTSALKSNPSYLRELDLSENQIRNTGLNLLCDVLKDSHC--------RL 707
Query: 507 XXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TL 565
++ C++ +A +S + +P L+ N+L + G K L+ + K + L
Sbjct: 708 QTLRLSSCEMTDEACSAV--TSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKL 765
Query: 566 ERVEMPQNGIYHVGITALSDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI- 623
E++ + I L+ A + N +LR LNL+ N + G L L K P +
Sbjct: 766 EKLHLCNCSITEEQCVILTSALKSNPSHLRELNLSCNELADSGVKNLSDLLMK-PQFRLE 824
Query: 624 -LNLGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQG 663
L+L C + + L N + L ++NL+ N+I G
Sbjct: 825 KLHLYKCSITEKQCKILTSALKSNPSHLRELNLSENQIRNTG 866
Score = 134 (52.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 72/318 (22%), Positives = 131/318 (41%)
Query: 389 NKEDAKVIVDAI-NEVKVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRM 447
++E K + A+ + L+ LNL GN G + K + + L + L F
Sbjct: 488 SEEGCKALTSALRSNPSHLIELNLGGNDPGQSGVKELTNLLQDPHCTLKTL---RFLSSA 544
Query: 448 KTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXX 507
EI +++ + + L EL+LS++ G V L+ LL+ C
Sbjct: 545 ADEI---CQHVAEIVGKNPLLLTELNLSNHKLGDTRVNQLSALLQDKHC-KFNTLILRCC 600
Query: 508 XXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLER 567
C++L+ AL + +P L+ +N+LE+ + + LE+
Sbjct: 601 SITEQQCEILTSAL---------KSNPSHLRELDLSQNKLESGVKNLSDLLKNHQCKLEK 651
Query: 568 VEMPQNGIYHVGITALSDAFEENKN-LRHLNLNDNTITYKGAIPLGQALSKLPS-LAILN 625
+ + + I L+ A + N + LR L+L++N I G L L L L
Sbjct: 652 LNLCKCSITKEQCEILTSALKSNPSYLRELDLSENQIRNTGLNLLCDVLKDSHCRLQTLR 711
Query: 626 LGDCLLKSAGASSIAKYLTDNTT-LEDVNLTCNEISVQGGLDL-VKAMKNKTKLKQINVS 683
L C + S++ L N + L ++NL+ N++ G +L MK + KL+++++
Sbjct: 712 LSSCEMTDEACSAVTSALKSNPSHLRELNLSYNKLGDSGVKNLSYLLMKPQFKLEKLHLC 771
Query: 684 ENQFGEEGVEEMEKLMKS 701
EE + +KS
Sbjct: 772 NCSITEEQCVILTSALKS 789
>UNIPROTKB|Q86W24 [details] [associations]
symbol:NLRP14 "NACHT, LRR and PYD domains-containing
protein 14" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] GO:GO:0007275
GO:GO:0005524 GO:GO:0030154 GO:GO:0007283 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837 eggNOG:NOG82860
HOGENOM:HOG000294064 HOVERGEN:HBG063656 EMBL:AY154469 EMBL:BK001107
IPI:IPI00219561 RefSeq:NP_789792.1 UniGene:Hs.449637
ProteinModelPortal:Q86W24 SMR:Q86W24 STRING:Q86W24
PhosphoSite:Q86W24 DMDM:38372322 PaxDb:Q86W24 PRIDE:Q86W24
DNASU:338323 Ensembl:ENST00000299481 GeneID:338323 KEGG:hsa:338323
UCSC:uc001mfb.1 CTD:338323 GeneCards:GC11P007017 HGNC:HGNC:22939
HPA:HPA039477 MIM:609665 neXtProt:NX_Q86W24 PharmGKB:PA162397917
InParanoid:Q86W24 OMA:TFPDGCQ OrthoDB:EOG4HDSSR PhylomeDB:Q86W24
GenomeRNAi:338323 NextBio:96933 Bgee:Q86W24 CleanEx:HS_NLRP14
Genevestigator:Q86W24 GermOnline:ENSG00000158077 Uniprot:Q86W24
Length = 1093
Score = 135 (52.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 64/228 (28%), Positives = 94/228 (41%)
Query: 404 KVLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMK-TEIPDALRYLGNGL 462
K L L L N LG K ++DAL +H + L K + R T + YL L
Sbjct: 843 KRLTHLCLADNVLGDGGVKLMSDAL---QHAQCTL-KSLVLRRCHFTSLSS--EYLSTSL 896
Query: 463 QQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALH 522
L LDL N GV+ L D+ R C + GC L +
Sbjct: 897 LH-NKSLTHLDLGSNWLQDNGVKLLCDVFRHPSC--------NLQDLELMGCVLTNACCL 947
Query: 523 DCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGIT 581
D +S +P L+ G N L+++G K+L + ++R+ + G+ +
Sbjct: 948 DL--ASVILNNP-NLRSLDLGNNDLQDDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQ 1004
Query: 582 ALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDC 629
LS A NK L +NL NT+ Y+G + L + L K P + LG C
Sbjct: 1005 DLSSALICNKRLIKMNLTQNTLGYEGIVKLYKVL-KSPKCKLQVLGLC 1051
Score = 128 (50.1 bits), Expect = 0.00035, P = 0.00035
Identities = 86/370 (23%), Positives = 152/370 (41%)
Query: 343 LNHKGRMTDKPNDDVSDILKKLESISVESG-QD-STKLSFAGQGLKLDNK-ED-----AK 394
L+H+ R PN + +L K I+ G QD ST L + LD K D K
Sbjct: 693 LHHELR---HPNCKLQKLLLKF--ITFPDGCQDISTSLIHNKNLMHLDLKGSDIGDNGVK 747
Query: 395 VIVDAINEVKV-LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPD 453
+ +A+ + L +L LE L V I++AL + + ++ ++ T + + D
Sbjct: 748 SLCEALKHPECKLQTLRLESCNLTVFCCLNISNALIRSQSL---IFLNLSTNNL---LDD 801
Query: 454 ALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITG 513
++ L L+ L L L G E L+ L S+ G
Sbjct: 802 GVQLLCEALRHPKCYLERLSLESCGLTEAGCEYLSLALISNKRLTHLCLADNVLGDG--G 859
Query: 514 CKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQN 573
KL+S AL + + LK + R + ++ L+ K+L +++ N
Sbjct: 860 VKLMSDAL---------QHAQCTLKSLVLRRCHFTSLSSEYLSTSLLHNKSLTHLDLGSN 910
Query: 574 GIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLK 632
+ G+ L D F NL+ L L +T + L + P+L L+LG+ L+
Sbjct: 911 WLQDNGVKLLCDVFRHPSCNLQDLELMGCVLTNACCLDLASVILNNPNLRSLDLGNNDLQ 970
Query: 633 SAGASSIAKYLT-DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEG 691
G + L N ++ + L ++ DL A+ +L ++N+++N G EG
Sbjct: 971 DDGVKILCDALRYPNCNIQRLGLEYCGLTSLCCQDLSSALICNKRLIKMNLTQNTLGYEG 1030
Query: 692 VEEMEKLMKS 701
+ ++ K++KS
Sbjct: 1031 IVKLYKVLKS 1040
>UNIPROTKB|Q86W28 [details] [associations]
symbol:NLRP8 "NACHT, LRR and PYD domains-containing protein
8" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005524
GO:GO:0005737 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
EMBL:AY154463 EMBL:BK001109 IPI:IPI00219557 IPI:IPI00795887
RefSeq:NP_789781.2 UniGene:Hs.446925 ProteinModelPortal:Q86W28
SMR:Q86W28 PhosphoSite:Q86W28 DMDM:143355070 PRIDE:Q86W28
DNASU:126205 Ensembl:ENST00000291971 GeneID:126205 KEGG:hsa:126205
UCSC:uc002qmh.3 UCSC:uc010etg.3 CTD:126205 GeneCards:GC19P056460
H-InvDB:HIX0040052 HGNC:HGNC:22940 MIM:609659 neXtProt:NX_Q86W28
PharmGKB:PA162398028 eggNOG:NOG145701 HOVERGEN:HBG100536
InParanoid:Q86W28 OMA:DIFAKMN OrthoDB:EOG44BB1Q PhylomeDB:Q86W28
GenomeRNAi:126205 NextBio:81714 Bgee:Q86W28 CleanEx:HS_NLRP8
Genevestigator:Q86W28 Uniprot:Q86W28
Length = 1048
Score = 134 (52.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 61/216 (28%), Positives = 100/216 (46%)
Query: 473 DLSDNAFGPIGVEGLADLLRSSC--CFAXXXXXXXXXXXXITGCKLLS---KALHDCYES 527
DL +N G ++ L L ++S C A I C L ++L C
Sbjct: 807 DLGNNLQGNGHLKTLI-LRKNSLENCGAYYLSVAQLERLSIENCNLTQLTCESLASCLRQ 865
Query: 528 SKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 586
SK + L+L N L++EGAK + L+ L+R+ + + + + A
Sbjct: 866 SKML-THLSL-----AENALKDEGAKHIWNALPHLRCPLQRLVLRKCDLTFNCCQDMISA 919
Query: 587 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLT 644
+NK L+ L+L+ N++ G I L +AL K P +L IL L +CL S ++A L
Sbjct: 920 LCKNKTLKSLDLSFNSLKDDGVILLCEAL-KNPDCTLQILELENCLFTSICCQAMASMLR 978
Query: 645 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 680
N L ++L+ N I V G L L +A ++ K +++
Sbjct: 979 KNQHLRHLDLSKNAIGVYGILTLCEAFSSQKKREEV 1014
>RGD|1309415 [details] [associations]
symbol:Nlrp12 "NLR family, pyrin domain containing 12"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008588
"release of cytoplasmic sequestered NF-kappaB" evidence=ISO]
[GO:0009968 "negative regulation of signal transduction"
evidence=ISO] [GO:0031953 "negative regulation of protein
autophosphorylation" evidence=ISO] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=ISO]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISO] [GO:0045409 "negative regulation of
interleukin-6 biosynthetic process" evidence=ISO] [GO:0045751
"negative regulation of Toll signaling pathway" evidence=ISO]
[GO:0050710 "negative regulation of cytokine secretion"
evidence=ISO] [GO:0050711 "negative regulation of interleukin-1
secretion" evidence=ISO] [GO:0050728 "negative regulation of
inflammatory response" evidence=ISO] RGD:1309415 GO:GO:0005524
GO:GO:0005737 GO:GO:0050728 GO:GO:0043124 GO:GO:0031953
GO:GO:0032088 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0008588 GO:GO:0045409
GO:GO:0050711 GeneTree:ENSGT00700000104141 CTD:91662
OrthoDB:EOG4TTGHK GO:GO:0045751 IPI:IPI00205289
RefSeq:NP_001162613.1 UniGene:Rn.108865 ProteinModelPortal:D4A399
Ensembl:ENSRNOT00000043650 GeneID:292541 KEGG:rno:292541
UCSC:RGD:1309415 NextBio:634266 ArrayExpress:D4A399 Uniprot:D4A399
Length = 1054
Score = 134 (52.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 73/300 (24%), Positives = 133/300 (44%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L+ L L N LG + + L +H + K +++ R A + L + A
Sbjct: 708 LIELALYRNALGSQGVRLLCQGL-RHANCKL---QNLRLKRCHIS-GSACQDLAAAII-A 761
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
L+ LDLS N+ G +G+E L + L+ C + C LL A
Sbjct: 762 NRNLIRLDLSGNSIGVLGLELLCEGLQHPMC--------RLQMIQLRKC-LLEAAAGRAL 812
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSD 585
S S L +++ + G N LE+ G K+L + + R+ I H+G + D
Sbjct: 813 ASVLSNNSHL-VELDLTG-NPLEDLGLKLLCQGLRH--PVCRLRTLWLKICHLGQASCED 868
Query: 586 ---AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIA 640
+ N++L L+L N + GA+ L + L + P L L LG C L S + +A
Sbjct: 869 LASTLKMNQSLMELDLGLNDLGDSGALLLCEGL-RHPDCKLQTLRLGICRLGSDACAGVA 927
Query: 641 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVEEMEKLM 699
L NT L +++L+ N++ +G L + ++++T +L+++ + + E++ ++
Sbjct: 928 SVLQVNTCLRELDLSFNDLGDRGLWLLGEGLRHQTCRLQKLWLDSCGLTSKACEDLSSVL 987
>UNIPROTKB|H0YCR7 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
InterPro:IPR003590 SMART:SM00368 EMBL:AC137894 HGNC:HGNC:10074
ChiTaRS:RNH1 PRIDE:H0YCR7 Ensembl:ENST00000529768 Bgee:H0YCR7
Uniprot:H0YCR7
Length = 285
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 56/215 (26%), Positives = 93/215 (43%)
Query: 461 GLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKA 520
G+ + A L EL L N G +G +A+L C I C + +K
Sbjct: 15 GIVASKASLRELALGSNKLGDVG---MAEL-----CPGLLHPSSRLRTLWIWECGITAKG 66
Query: 521 LHD-CYESSKKEGSPLALKVFIAGRNRLENEGAKMLA-AVFKKLKTLERVEMPQNGIYHV 578
D C KE +LK N L +EGA++L + + LE + +
Sbjct: 67 CGDLCRVLRAKE----SLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 122
Query: 579 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGAS 637
+ S +N+ L L +++N + G L Q L + S L +L L DC + + S
Sbjct: 123 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCS 182
Query: 638 SIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 672
S+A L N +L +++L+ N + G L LV++++
Sbjct: 183 SLAATLLANHSLRELDLSNNCLGDAGILQLVESVR 217
>ZFIN|ZDB-GENE-080207-2 [details] [associations]
symbol:zgc:174944 "zgc:174944" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003877 Pfam:PF00622
ZFIN:ZDB-GENE-080207-2 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 OrthoDB:EOG4TTGHK eggNOG:NOG299368
HOVERGEN:HBG092009 HOGENOM:HOG000251591 EMBL:BC155301
IPI:IPI00884716 RefSeq:NP_001108057.1 UniGene:Dr.124687
ProteinModelPortal:A9JTD7 GeneID:100136867 KEGG:dre:100136867
NextBio:20789384 Uniprot:A9JTD7
Length = 1022
Score = 133 (51.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 69/261 (26%), Positives = 112/261 (42%)
Query: 405 VLVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQ 464
VL L+L N L + K ++D L K +H K + + T ++ + ++L + LQ
Sbjct: 624 VLGELDLSNNDLQDSGVKLLSDGL-KSQHCKLDTLR-LMTCKLTVQCCESL---SSALQS 678
Query: 465 AGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDC 524
+ L ELDLS+N GV+ L+D L+S C + CKL + +
Sbjct: 679 SNCVLRELDLSNNDLQDSGVKKLSDGLKSQHC--------KLDTLRLMTCKLTADSCESL 730
Query: 525 YESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITAL 583
SS + S L+ N L++ G K L+ K + LE + + + G L
Sbjct: 731 --SSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSVNCKLETLRLSGCMVTEEGCGFL 788
Query: 584 SDAFEEN-KNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNL---GDCLLKSAGAS 637
S A N +LR L+L+ N G L + L P+ + LNL G+ + +AG
Sbjct: 789 SSALTSNPSHLRELDLSYNHPGDSGVKLLSEQLED-PNYTLDKLNLDHGGETRI-TAGPR 846
Query: 638 SIAKYLTDNTTLEDVNLTCNE 658
+LT + + L +E
Sbjct: 847 KYVCFLTLDPNTANTELILSE 867
Score = 130 (50.8 bits), Expect = 0.00020, P = 0.00020
Identities = 54/204 (26%), Positives = 87/204 (42%)
Query: 458 LGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLL 517
L + LQ + L ELDLS+N GV+ L+D L+S C + CKL
Sbjct: 614 LSSALQSSNCVLGELDLSNNDLQDSGVKLLSDGLKSQHC--------KLDTLRLMTCKLT 665
Query: 518 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIY 576
+ SS + S L+ N L++ G K L+ K L+ + + +
Sbjct: 666 VQCCESL--SSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSQHCKLDTLRLMTCKLT 723
Query: 577 HVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAILNLGDCLLKSA 634
+LS A + N LR L+L++N + G L L + L L L C++
Sbjct: 724 ADSCESLSSALQSSNCVLRELDLSNNDLQDSGVKKLSDGLKSVNCKLETLRLSGCMVTEE 783
Query: 635 GASSIAKYLTDNTT-LEDVNLTCN 657
G ++ LT N + L +++L+ N
Sbjct: 784 GCGFLSSALTSNPSHLRELDLSYN 807
>MGI|MGI:3056570 [details] [associations]
symbol:Nlrp4b "NLR family, pyrin domain containing 4B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:3056570
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104141
HOGENOM:HOG000294064 HOVERGEN:HBG063656 EMBL:AY596198 EMBL:AY355342
EMBL:AK054426 IPI:IPI00226298 RefSeq:NP_766069.1 UniGene:Mm.95244
ProteinModelPortal:Q8C6J9 SMR:Q8C6J9 PhosphoSite:Q8C6J9
PRIDE:Q8C6J9 Ensembl:ENSMUST00000047809 Ensembl:ENSMUST00000117413
GeneID:210045 KEGG:mmu:210045 UCSC:uc009fdi.1 CTD:210045
eggNOG:KOG4308 InParanoid:Q8C6J9 OMA:SAMNCRE OrthoDB:EOG42FSKF
NextBio:372846 Bgee:Q8C6J9 CleanEx:MM_NLRP4B Genevestigator:Q8C6J9
Uniprot:Q8C6J9
Length = 863
Score = 132 (51.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 41/122 (33%), Positives = 63/122 (51%)
Query: 583 LSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAI--LNLGDCLLKSAGASSIA 640
LSD +NK+LR+LN++ N + +G L +AL+ LP+ A+ L+L C L A +A
Sbjct: 733 LSDVLRQNKSLRYLNISYNNLKDEGLKALCRALT-LPNSALHSLSLEACQLTGACCKDLA 791
Query: 641 KYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEGVE----EM 695
T L +NL N + G L KAMK++T L ++ + F + E EM
Sbjct: 792 STFTRYKCLRRINLAKNSLGFSGLFVLCKAMKDQTCTLYELKLRMADFDSDSQEFLLSEM 851
Query: 696 EK 697
E+
Sbjct: 852 ER 853
>UNIPROTKB|G3MYV6 [details] [associations]
symbol:Bt.111263 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 EMBL:DAAA02047820
EMBL:DAAA02047821 EMBL:DAAA02047822 EMBL:DAAA02047823
EMBL:DAAA02047824 EMBL:DAAA02047825 EMBL:DAAA02047826
Ensembl:ENSBTAT00000066236 Uniprot:G3MYV6
Length = 1037
Score = 141 (54.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 62/235 (26%), Positives = 102/235 (43%)
Query: 448 KTEIP-DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXX 506
K+ P + LR LG L + L LDLS N+ G+ +L S C
Sbjct: 755 KSMAPVEGLRKLGL-LLRGDRHLTHLDLSSNSLDAAVSRGVFRMLGHSAC-GLKYLWLEK 812
Query: 507 XXXXITGCKLLSKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TL 565
C+ L+ L +P ++ + G N L +EG ++L + + L
Sbjct: 813 GNLSAAACEDLASLL---------TSTPRLTRLCL-GLNPLGDEGVQLLCGSLTRPECVL 862
Query: 566 ERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP-SLAIL 624
+R+E+ + LSDA +++L HLNL N++ G L AL + +L L
Sbjct: 863 QRLELWCCRLSTPSCRHLSDALLRSRSLTHLNLRRNSLGDGGVKLLSSALGRADCALQSL 922
Query: 625 NLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQ 679
NL C L AG +A L N L+ +++ N+I +G +L +K+ + + Q
Sbjct: 923 NLSHCSLTVAGCRELAHALKHNGHLKILDVGNNDIQDEGVKELCSVLKSPSCVLQ 977
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/105 (22%), Positives = 42/105 (40%)
Query: 310 HTIADQEEGWIKVINSMVSVIPIDNPLGPAVIELNHKG-RMTDKPNDDVSDILKKLESIS 368
H AD W +++ ++ D L + E G RM+ D+V D ++LE
Sbjct: 564 HAFADANPYWRQMVRFFFGLLGTD--LARQLEEA--VGCRMSPGVADEVLDWAEELERCG 619
Query: 369 VESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEG 413
SG + F L +D + +N + V L+++G
Sbjct: 620 AVSG----RFDFLWLFQCLHETQDENLARRVLNRLPV-ADLDIQG 659
>UNIPROTKB|F1RMK9 [details] [associations]
symbol:NLRP8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 OMA:DIFAKMN
EMBL:FP102565 Ensembl:ENSSSCT00000003679 Uniprot:F1RMK9
Length = 1015
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 544 RNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
+N L+++GAK L + + L+R+ + + ++ A +NK LR L+L N+
Sbjct: 875 KNSLKDDGAKQLWDALQHTRHPLQRLVLRNCALTSDCCQNMASALNKNKTLRSLDLGFNS 934
Query: 603 ITYKGAIPLGQALSKLPS-LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISV 661
+ G I L Q L S L +L L +CL S+ ++A L N +L ++L+ N+I
Sbjct: 935 LKDDGVIMLCQPLMDPDSGLQVLELENCLFTSSCCEAMASVLLSNQSLRYLDLSKNDIQC 994
Query: 662 QGGLDLVKAM-KNKTKLKQI 680
G L + + K K K+K I
Sbjct: 995 HGVRFLCETIQKKKGKVKVI 1014
>RGD|1598218 [details] [associations]
symbol:Nlrp14 "NLR family, pyrin domain containing 14"
species:10116 "Rattus norvegicus" [GO:0007283 "spermatogenesis"
evidence=ISO] GO:GO:0007283 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104427 IPI:IPI00958183
Ensembl:ENSRNOT00000051854 Uniprot:F1M918
Length = 737
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 55/199 (27%), Positives = 84/199 (42%)
Query: 469 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 528
+ LDL D G GV+ L + L+ C +T C+ LSKAL +S+
Sbjct: 509 VTHLDLKDTDLGDNGVKTLCEALKYQGC-KLRVLRLESCDLNVTHCQNLSKAL----QSN 563
Query: 529 KKEGSPLALKVFI-AGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALSDA 586
+ VF+ N L N+G K L V + LER+ + G+ VG LS A
Sbjct: 564 RS-------LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKVGCEVLSSA 616
Query: 587 FEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGASSIAKYLT 644
+ K L HL L N + +G L L + P +L L L C G+ ++
Sbjct: 617 LTKTKRLTHLCLAHNVLEDEGIELLSYTL-RHPRCTLQSLVLRCCYFTPIGSEHLSLLFR 675
Query: 645 DNTTLEDVNLTCNEISVQG 663
+L ++L N+++ G
Sbjct: 676 TTKSLIHLDLGFNKLADSG 694
Score = 122 (48.0 bits), Expect = 0.00095, P = 0.00095
Identities = 63/244 (25%), Positives = 106/244 (43%)
Query: 409 LNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGAR 468
L+L+ LG N K + +AL K++ K + + T + + L Q+
Sbjct: 512 LDLKDTDLGDNGVKTLCEAL-KYQGCKLRVLRLESCDLNVTHCQNLSKAL-----QSNRS 565
Query: 469 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 528
LV L+LS N+ GV+ L ++L + C + GC++LS AL +
Sbjct: 566 LVFLNLSTNSLSNDGVKSLCEVLENPNCPLERLALASCGLTKV-GCEVLSSAL-----TK 619
Query: 529 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSDAF 587
K + L L N LE+EG ++L+ + + TL+ + + +G LS F
Sbjct: 620 TKRLTHLCL-----AHNVLEDEGIELLSYTLRHPRCTLQSLVLRCCYFTPIGSEHLSLLF 674
Query: 588 EENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTD 645
K+L HL+L N + G L Q L + P+ L L L +C L + L++
Sbjct: 675 RTTKSLIHLDLGFNKLADSGVKLLCQTLQQ-PNCNLQELELENCGLTPGCCQDLLDLLSN 733
Query: 646 NTTL 649
N ++
Sbjct: 734 NQSV 737
>ZFIN|ZDB-GENE-110913-10 [details] [associations]
symbol:si:ch73-289h5.4 "si:ch73-289h5.4"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003877
Pfam:PF00622 ZFIN:ZDB-GENE-110913-10 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR007111
PROSITE:PS50837 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 InterPro:IPR003590 SMART:SM00368
EMBL:CABZ01013139 EMBL:CU694442 IPI:IPI00897710
Ensembl:ENSDART00000113296 GeneTree:ENSGT00700000104633
Uniprot:E7EXM5
Length = 1172
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 67/250 (26%), Positives = 104/250 (41%)
Query: 458 LGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLL 517
L + LQ + L ELDLS+N GV+ L+D L+ C + CK L
Sbjct: 706 LSSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKDPNC-KLETLRFFMCKLTVNSCKSL 764
Query: 518 SKALHDCYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIY 576
S AL + S L+ G N L++ G K+L+ K LE + +
Sbjct: 765 SSAL---------QSSNCVLRELDLGDNDLQDSGVKLLSDGLKSPNCKLEILRFVMCKLT 815
Query: 577 HVGITALSDAFEE-NKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKS 633
+LS A + N LR L+L+DN + G L L K P+ L L C L
Sbjct: 816 VDSCESLSSALQSSNCVLRELDLSDNDLQDSGVKHLFDEL-KSPNCKLETLRFVMCKLTV 874
Query: 634 AGASSIAKYL-TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG 691
S++ L + N L +++L+ N++ G L +K+ L+ + +S EEG
Sbjct: 875 DSCESLSLALQSPNCVLRELDLSDNDLQDSGVKLLSDGLKSPNCNLEILRLSGCMVTEEG 934
Query: 692 VEEMEKLMKS 701
+ + S
Sbjct: 935 CGFLSSALSS 944
>UNIPROTKB|K7GQ78 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] EMBL:CU928276
Ensembl:ENSSSCT00000033324 GeneTree:ENSGT00660000095240
Gene3D:1.10.533.10 InterPro:IPR001315 InterPro:IPR011029
InterPro:IPR007111 Pfam:PF00619 SUPFAM:SSF47986 PROSITE:PS50209
PROSITE:PS50837 Uniprot:K7GQ78
Length = 845
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 42/182 (23%), Positives = 82/182 (45%)
Query: 525 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 579
YE+ ++ LA + A +L + L+ V + +++ N + G
Sbjct: 660 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHFRKQLALDLDNNNLNDYG 719
Query: 580 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 639
+ L F L + L+ N IT G L + L+K + L L + + GA +
Sbjct: 720 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYV 776
Query: 640 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ G+EG + + +
Sbjct: 777 ARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEAL 836
Query: 700 KS 701
++
Sbjct: 837 RN 838
>UNIPROTKB|F1SII2 [details] [associations]
symbol:NOD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=IEA] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0050830 "defense
response to Gram-positive bacterium" evidence=IEA] [GO:0050700
"CARD domain binding" evidence=IEA] [GO:0046330 "positive
regulation of JNK cascade" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042228 "interleukin-8 biosynthetic process" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA] [GO:0016323 "basolateral
plasma membrane" evidence=IEA] [GO:0016045 "detection of bacterium"
evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0002606 "positive regulation of
dendritic cell antigen processing and presentation" evidence=IEA]
InterPro:IPR001315 Pfam:PF00619 PROSITE:PS50209 GO:GO:0005737
GO:GO:0016045 GO:GO:0006917 GO:GO:0050830 GO:GO:0035556
GO:GO:0043123 GO:GO:0070374 GO:GO:0046330 GO:GO:0016323
GO:GO:0032755 GO:GO:0006919 GO:GO:0051092 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0032760 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0002606 OMA:NDYGVRE GO:GO:0042228
GeneTree:ENSGT00660000095240 EMBL:CU928276
Ensembl:ENSSSCT00000018159 Uniprot:F1SII2
Length = 846
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 42/182 (23%), Positives = 82/182 (45%)
Query: 525 YESSKKEGSPLALKVFIAGRNRLE-----NEGAKMLAAVFKKLKTLERVEMPQNGIYHVG 579
YE+ ++ LA + A +L + L+ V + +++ N + G
Sbjct: 660 YETQSEKVGQLAARGICANYLKLTFCNACSADCSALSFVLHHFRKQLALDLDNNNLNDYG 719
Query: 580 ITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSI 639
+ L F L + L+ N IT G L + L+K + L L + + GA +
Sbjct: 720 VRELQPCFSR---LTVIRLSVNQITDSGVKVLYEELTKYKIVTFLGLYNNQITDVGARYV 776
Query: 640 AKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
A+ L + L+ + L N+I+ +GG L +A+KN + ++ + NQ G+EG + + +
Sbjct: 777 ARILDECKGLKCLKLGKNKITSEGGKCLARAVKNSRSIFEVGMWGNQIGDEGAKAFAEAL 836
Query: 700 KS 701
++
Sbjct: 837 RN 838
>UNIPROTKB|E2RI72 [details] [associations]
symbol:PPP1R37 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019902 "phosphatase binding"
evidence=IEA] [GO:0010923 "negative regulation of phosphatase
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0010923 GeneTree:ENSGT00640000091171 CTD:284352 OMA:GMTLPHT
EMBL:AAEX03000889 EMBL:AAEX03000888 RefSeq:XP_541567.3
Ensembl:ENSCAFT00000007363 GeneID:484452 KEGG:cfa:484452
NextBio:20858590 Uniprot:E2RI72
Length = 700
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/165 (21%), Positives = 81/165 (49%)
Query: 538 KVFIAGRNRLEN-EGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAF-EENKNLRH 595
++++A N+L + + L + K +L+ +++ N + G+ + + E+ K L
Sbjct: 251 ELYLAD-NKLNGLQDSAQLGNLLKFNSSLQILDLRNNHVLDSGLAYICEGLKEQKKGLET 309
Query: 596 LNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLT 655
L L +N +T+ G LG L SL LNLG + + G ++ L N ++ + LT
Sbjct: 310 LVLWNNQLTHTGMAFLGMTLPHTQSLETLNLGHNPIGNEGVRNLKNGLISNRSVLRLGLT 369
Query: 656 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLMK 700
+++ +G + + + + +L ++++ EN+ G+ + +K
Sbjct: 370 STKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK 414
>UNIPROTKB|F1PSA2 [details] [associations]
symbol:NLRP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
InterPro:IPR007111 PROSITE:PS50837 GeneTree:ENSGT00700000104427
OMA:QEVWLLI EMBL:AAEX03000720 Ensembl:ENSCAFT00000003937
Uniprot:F1PSA2
Length = 1170
Score = 130 (50.8 bits), Expect = 0.00023, P = 0.00023
Identities = 73/277 (26%), Positives = 112/277 (40%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L SL+L GN + K + DAL+ + L K M G+ + PD + L + L +
Sbjct: 866 LKSLSLVGNKVTNQGIKPLCDALTASQC---TLQK-MILGKCGLKAPDC-QDLASALI-S 919
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
L L LS N+ G G+ L ++ C + GC L+ AL
Sbjct: 920 NQSLTHLCLSSNSLGSEGMNLLGRAIKFPNC-GLQRLILNECNLDVAGCGFLAFAL---- 974
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALS 584
+ + L+L + N LE++G +L V + L+ +E+ + + LS
Sbjct: 975 -MGNRHLTHLSLSM-----NPLEDDGMNLLCEVIMEPSCHLQDLELVKCHLTAGCCKKLS 1028
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALS-KLPSLAILNLGDCLLKSAGASSIAKYL 643
NK+L+ L+L N + G L + L + SL L L C L S +A L
Sbjct: 1029 HVIVRNKHLKSLDLAVNALGDDGVTALCEGLKHRKASLKRLGLEACGLTSGCCEVLASAL 1088
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQI 680
+ L +NL N+ S G L A T QI
Sbjct: 1089 LCSQRLTSLNLMRNDFSPMGMTKLCPAFAQPTSNLQI 1125
>UNIPROTKB|P59047 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0043487 "regulation
of RNA stability" evidence=IEA] [GO:0043623 "cellular protein
complex assembly" evidence=IEA] [GO:0045179 "apical cortex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0043234 GO:GO:0005730 GO:GO:0001701
GO:GO:0009566 GO:GO:0009887 GO:GO:0045179 GO:GO:0031647
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 GO:GO:0043623
GO:GO:0007566 InterPro:IPR007111 PROSITE:PS50837 GO:GO:0043487
HOGENOM:HOG000294064 HOVERGEN:HBG063656 CTD:126206 eggNOG:NOG147585
OrthoDB:EOG44XJG0 EMBL:AY054986 EMBL:AY154460 EMBL:AC011470
EMBL:AC024580 IPI:IPI00168282 RefSeq:NP_703148.4 UniGene:Hs.356872
ProteinModelPortal:P59047 SMR:P59047 STRING:P59047
PhosphoSite:P59047 DMDM:215274029 PRIDE:P59047 DNASU:126206
Ensembl:ENST00000390649 GeneID:126206 KEGG:hsa:126206
UCSC:uc002qmi.3 GeneCards:GC19P056511 H-InvDB:HIX0040046
HGNC:HGNC:21269 MIM:609658 neXtProt:NX_P59047 PharmGKB:PA162397970
InParanoid:P59047 OMA:SQAMEQE PhylomeDB:P59047 GenomeRNAi:126206
NextBio:81718 Bgee:P59047 CleanEx:HS_NLRP5 Genevestigator:P59047
GermOnline:ENSG00000171487 Uniprot:P59047
Length = 1200
Score = 130 (50.8 bits), Expect = 0.00024, P = 0.00024
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 522 HDCYESSKK--EGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHV 578
H CY + SP + +AG N++ ++G L+ + + L+++ + GI
Sbjct: 880 HACYLKISQILTTSPSLKSLSLAG-NKVTDQGVMPLSDALRVSQCALQKLILEDCGITAT 938
Query: 579 GITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLP--SLAILNLGDCLLKSAGA 636
G +L+ A N++L HL L++N++ +G L +++ +LP SL L L C L +AG
Sbjct: 939 GCQSLASALVSNRSLTHLCLSNNSLGNEGVNLLCRSM-RLPHCSLQRLMLNQCHLDTAGC 997
Query: 637 SSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMK 672
+A L N+ L ++L+ N + G L + M+
Sbjct: 998 GFLALALMGNSWLTHLSLSMNPVEDNGVKLLCEVMR 1033
>MGI|MGI:2675377 [details] [associations]
symbol:Nlrp9b "NLR family, pyrin domain containing 9B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2675377 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 OrthoDB:EOG4N04DB eggNOG:NOG148799 EMBL:AY596196
EMBL:AY360471 IPI:IPI00340432 IPI:IPI00471053 RefSeq:NP_918947.2
UniGene:Mm.277114 HSSP:P13489 ProteinModelPortal:Q66X22 SMR:Q66X22
STRING:Q66X22 PhosphoSite:Q66X22 PRIDE:Q66X22
Ensembl:ENSMUST00000073151 Ensembl:ENSMUST00000117909 GeneID:243874
KEGG:mmu:243874 UCSC:uc009fnt.1 UCSC:uc012fbm.1 CTD:243874
InParanoid:Q66X22 OMA:FGHDSEL NextBio:385990 Bgee:Q66X22
CleanEx:MM_NLRP9B Genevestigator:Q66X22 Uniprot:Q66X22
Length = 1003
Score = 131 (51.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 65/238 (27%), Positives = 100/238 (42%)
Query: 467 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 526
+++ L L +N GV L ++L+ C I C L +AL
Sbjct: 748 SKVKHLSLVENPLKNKGVMSLCEMLKDPSCVLQSLMLSYCCLTFIA-CGHLYEAL----- 801
Query: 527 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSD 585
S K S L L G N LE+ G +L K TL+ + +P + +S
Sbjct: 802 LSNKHLSLLDL-----GSNFLEDTGVNLLCEALKDPNCTLKELWLPGCFLTSQCCEEISA 856
Query: 586 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL 643
N+NL+ L L +N I G L +ALS P+ L L L C S +A L
Sbjct: 857 VLICNRNLKTLKLGNNNIQDTGVRQLCEALSH-PNCNLECLGLDLCEFTSDCCKDLALAL 915
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKNKT-KLKQINVSENQFGEEG---VEEMEK 697
T TL +NL + G + L +A+ +K LK + + ++ F EE ++++EK
Sbjct: 916 TTCKTLNSLNLDWKTLDHSGLVVLCEALNHKRCNLKMLGLDKSAFSEESQTLLQDVEK 973
Score = 48 (22.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 405 VLVSLNLEGNT--LGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPD 453
+++SL L+ N L + A K +K++ F + ++ ++T T IPD
Sbjct: 68 MMLSLFLQVNREDLSIMAQKKKRHKQTKYKKFMKTTFERIWTLETNTHIPD 118
>UNIPROTKB|Q86WI3 [details] [associations]
symbol:NLRC5 "Protein NLRC5" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060335 "positive regulation of
interferon-gamma-mediated signaling pathway" evidence=IMP;IDA]
[GO:0060340 "positive regulation of type I interferon-mediated
signaling pathway" evidence=IDA] [GO:0045087 "innate immune
response" evidence=IMP;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0060339 "negative regulation of type I
interferon-mediated signaling pathway" evidence=IDA] [GO:0051607
"defense response to virus" evidence=IEP] [GO:0043549 "regulation
of kinase activity" evidence=IDA] [GO:0032088 "negative regulation
of NF-kappaB transcription factor activity" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0032480 "negative
regulation of type I interferon production" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045345 "positive regulation of MHC class I
biosynthetic process" evidence=IDA] [GO:0000979 "RNA polymerase II
core promoter sequence-specific DNA binding" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_6900 GO:GO:0045944 GO:GO:0045087
GO:GO:0051607 GO:GO:0032088 InterPro:IPR025875 Pfam:PF12799
GO:GO:0000979 GO:GO:0032480 GO:GO:0043549 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0045345 GO:GO:0060339 GO:GO:0060340
GO:GO:0060335 HSSP:P10775 eggNOG:NOG265451 EMBL:AF389420
EMBL:EF452236 EMBL:AK074133 EMBL:AK074182 EMBL:AC009090
EMBL:AC023825 EMBL:AK090439 EMBL:BC050527 EMBL:BC063566
EMBL:AK027414 EMBL:AK027416 IPI:IPI00329085 IPI:IPI00383061
IPI:IPI00641739 IPI:IPI00647281 IPI:IPI00789837 IPI:IPI00854610
RefSeq:NP_115582.4 UniGene:Hs.528836 ProteinModelPortal:Q86WI3
SMR:Q86WI3 IntAct:Q86WI3 STRING:Q86WI3 DMDM:269849666 PaxDb:Q86WI3
PRIDE:Q86WI3 DNASU:84166 Ensembl:ENST00000262510
Ensembl:ENST00000308149 Ensembl:ENST00000436936
Ensembl:ENST00000539144 Ensembl:ENST00000539881 GeneID:84166
KEGG:hsa:84166 UCSC:uc021tit.1 UCSC:uc021tiu.1 CTD:84166
GeneCards:GC16P057023 HGNC:HGNC:29933 MIM:613537 neXtProt:NX_Q86WI3
PharmGKB:PA162397694 HOVERGEN:HBG108194 InParanoid:Q86WI3
OMA:EILLSWN OrthoDB:EOG4Z0B4Q PhylomeDB:Q86WI3 ChiTaRS:NLRC5
GenomeRNAi:84166 NextBio:73516 ArrayExpress:Q86WI3 Bgee:Q86WI3
CleanEx:HS_NLRC5 Genevestigator:Q86WI3 Uniprot:Q86WI3
Length = 1866
Score = 135 (52.6 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 39/157 (24%), Positives = 76/157 (48%)
Query: 545 NRLENEGAK--MLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNT 602
N E++ A +L ++ L L+ + + + G+ L+ +L L+L++N
Sbjct: 1474 NLCEDDDASSLLLQSLLLSLSELKTFRLTSSCVSTEGLAHLASGLGHCHHLEELDLSNNQ 1533
Query: 603 ITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQ 662
+G L +AL L L+L LL S+ + + L+ T L+ + L N I
Sbjct: 1534 FDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTLALLTHRLSQMTCLQSLRLNRNSIGDV 1593
Query: 663 GGLDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
G L +A++ T L+++++S NQ G+ GV+ + ++
Sbjct: 1594 GCCHLSEALRAATSLEELDLSHNQIGDAGVQHLATIL 1630
Score = 126 (49.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 57/235 (24%), Positives = 98/235 (41%)
Query: 453 DALRYLGNGLQQAGARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXIT 512
+ L +L +GL L ELDLS+N F G + L L
Sbjct: 1509 EGLAHLASGLGHCH-HLEELDLSNNQFDEEGTKALMRALEGKWMLKRLDLSHLLLNSSTL 1567
Query: 513 GCKLLSKALHD--CYESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKTLERVEM 570
LL+ L C +S L++ RN + + G L+ + +LE +++
Sbjct: 1568 A--LLTHRLSQMTCLQS---------LRL---NRNSIGDVGCCHLSEALRAATSLEELDL 1613
Query: 571 PQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCL 630
N I G+ L+ LR ++L+ N+I+ G + L ++L L L LG
Sbjct: 1614 SHNQIGDAGVQHLATILPGLPELRKIDLSGNSISSAGGVQLAESLVLCRRLEELMLGCNA 1673
Query: 631 LKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKLKQINVSEN 685
L A +A+ L + L ++L + + G L L +A+ L++I+++EN
Sbjct: 1674 LGDPTALGLAQELPQH--LRVLHLPFSHLGPGGALSLAQALDGSPHLEEISLAEN 1726
Score = 58 (25.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 365 ESISVESGQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAI 424
ES G S L+ Q +L DA+ ++ + E L ++L GN L + +
Sbjct: 832 ESDGQRKGAQSRSLTLRLQKCQLQ-VHDAEALIALLQEGPHLEEVDLSGNQLEDEGCRLM 890
Query: 425 ADALSKHEHFKRAL 438
A+A S+ H R L
Sbjct: 891 AEAASQL-HIARKL 903
Score = 54 (24.1 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 323 INSMVSVIPIDNPLGPAVIELNHKGRMTDKPNDDVSDILKKLESISVESGQDSTKLSFAG 382
++S++ +P + PL + L H G + +K + + K L S G L F+G
Sbjct: 961 LDSLMLQMPSELPLSSRRMRLTHCG-LQEK---HLEQLCKALGG-SCHLGH--LHLDFSG 1013
Query: 383 QGLKLDNKEDAKVIVDAINEVKVLVSLNLEGNTLGVNAAKAIADALS 429
L E A + + + L SLNL N L ++A + S
Sbjct: 1014 NAL---GDEGAARLAQLLPGLGALQSLNLSENGLSLDAVLGLVRCFS 1057
Score = 37 (18.1 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 469 LVELDLSDNAFGPIGVEGLADLL 491
L ++DLS N G G+ L + L
Sbjct: 1245 LSQVDLSANLLGDSGLRCLLECL 1267
>UNIPROTKB|E2RJ74 [details] [associations]
symbol:NLRP14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524 GO:GO:0007283
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 GeneTree:ENSGT00700000104427 InterPro:IPR003590
SMART:SM00368 EMBL:AAEX03012879 EMBL:AAEX03012880
Ensembl:ENSCAFT00000010803 OMA:KSPECKL Uniprot:E2RJ74
Length = 1094
Score = 141 (54.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 76/294 (25%), Positives = 128/294 (43%)
Query: 409 LNLEGNTLGVNAAKAIADALSKHE-HFKRALWKDMFTGRMKTEIPD-ALRYLGNGLQQAG 466
LNL N L + K + +AL + H +R + G D +L + N
Sbjct: 793 LNLSTNHLLDDGVKLLCEALGHPKCHLERLSLESC--GLTVAGCEDLSLALISN------ 844
Query: 467 ARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYE 526
RL L L+DN G GV+ + D L+ C ++ + LS AL C +
Sbjct: 845 KRLTHLCLADNILGDDGVKLVNDALKHPQCKLQSLVLRRCHFTSLSS-EHLSSALL-CNK 902
Query: 527 SSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVGITALSD 585
S + L + G N ++++G K+L F+ L+ +E+ + + L+
Sbjct: 903 SL------IHLDL---GSNWIQDDGIKLLCDAFRHPSCNLQDLELMGCVLTSMCCLDLAS 953
Query: 586 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLG--DCLLKSAGASSIAKYL 643
A N +L++L+L N + G L +AL + P+ I LG C L S ++ L
Sbjct: 954 AILNNSHLQNLDLGHNDLRDDGVKILCEAL-RHPNCNIQRLGLEYCGLTSLCCQDLSYTL 1012
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLVKAMKN-KTKLKQINVSENQFGEEGVEEME 696
N L +NL N + +G + L + +K+ + KLK + V + F EE + +E
Sbjct: 1013 RSNQNLIKINLKQNTLGYEGMMKLCEVLKSPECKLKVLGVCKEAFDEEAQKLLE 1066
Score = 37 (18.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 394 KVIVDAINEVKVLVS 408
KV++D +V +LVS
Sbjct: 605 KVVIDVCGKVHLLVS 619
>UNIPROTKB|E2R142 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524
GO:GO:0006355 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030075 Uniprot:E2R142
Length = 1128
Score = 139 (54.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
K+L A F L+ L+ + +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 976 KILEA-FSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLA 1034
Query: 613 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1035 EALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Query: 672 K 672
+
Sbjct: 1095 R 1095
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 256 LSEAKLLPSLTESQLLACMKL 276
L E L+P LL+C+ L
Sbjct: 204 LGETVLMPVPASGSLLSCLSL 224
>UNIPROTKB|F1PJN5 [details] [associations]
symbol:CIITA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046677 "response to antibiotic"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045345
"positive regulation of MHC class I biosynthetic process"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR008095 PRINTS:PR01719 GO:GO:0005524 GO:GO:0045944
GO:GO:0046677 GO:GO:0000122 GO:GO:0044212 GO:GO:0034341
InterPro:IPR007111 PROSITE:PS50837 OMA:PQAFPKL GO:GO:0045345
GeneTree:ENSGT00660000095240 EMBL:AAEX03004543
Ensembl:ENSCAFT00000030069 Uniprot:F1PJN5
Length = 1128
Score = 139 (54.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 41/121 (33%), Positives = 64/121 (52%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLG 612
K+L A F L+ L+ + +N I G+ LS F K L LNL+ N+IT GA L
Sbjct: 976 KILEA-FSSLQHLDLDSLSENKIGDEGVEQLSATFPRLKALETLNLSQNSITDVGACKLA 1034
Query: 613 QALSKL-PSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAM 671
+AL L PSL L+L + + GA S+A+ L D +L +++ N+ + G L ++
Sbjct: 1035 EALPSLAPSLLRLSLYNNYICDVGAESLAQVLPDMVSLRVLDVQYNKFTGAGAQQLAASL 1094
Query: 672 K 672
+
Sbjct: 1095 R 1095
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 256 LSEAKLLPSLTESQLLACMKL 276
L E L+P LL+C+ L
Sbjct: 204 LGETVLMPVPASGSLLSCLSL 224
>MGI|MGI:2675292 [details] [associations]
symbol:Nlrp9a "NLR family, pyrin domain containing 9A"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2675292 GO:GO:0005524 GO:GO:0005737 Gene3D:1.10.533.10
InterPro:IPR004020 InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986
PROSITE:PS50824 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00700000104141 HOGENOM:HOG000294064
HOVERGEN:HBG063656 HSSP:P10775 EMBL:AY596202 EMBL:AY364009
IPI:IPI00377936 IPI:IPI00471049 RefSeq:NP_001041685.1
UniGene:Mm.11889 ProteinModelPortal:Q66X03 SMR:Q66X03 PRIDE:Q66X03
DNASU:233001 Ensembl:ENSMUST00000117252 GeneID:233001
KEGG:mmu:233001 UCSC:uc012fge.1 CTD:233001 eggNOG:NOG148799
NextBio:381438 Bgee:Q66X03 CleanEx:MM_NLRP9A Genevestigator:Q66X03
Uniprot:Q66X03
Length = 949
Score = 126 (49.4 bits), Expect = 0.00048, P = 0.00048
Identities = 77/303 (25%), Positives = 123/303 (40%)
Query: 409 LNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGAR 468
+NL G L +A + + AL F +++ G+ +A + L +
Sbjct: 643 MNLYGTNLSNDAVERLCSALK----FSTCGVEELLLGKCDIS-SEACGIIAASL--INSE 695
Query: 469 LVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESS 528
+ L L +N GV L ++L+ C I C L +AL S
Sbjct: 696 VKHLSLVENPLKNKGVMSLCEMLKDPSCVLESLMLSYCCLTFIA-CGHLYEAL-----LS 749
Query: 529 KKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLK-TLERVEMPQNGIYHVG--ITALSD 585
+ S L L G N LE+ G +L K TL+ + +P G Y +S
Sbjct: 750 NEHLSLLDL-----GSNFLEDTGVNLLCEALKDPNCTLKELWLP--GCYLTSECCEEISA 802
Query: 586 AFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYL 643
N NL+ L L +N I G L +AL P+ + L L C S +A L
Sbjct: 803 VLTCNTNLKTLKLGNNNIQDTGVKRLCEALCH-PNCEMQCLGLDMCDFTSDCCEDLALVL 861
Query: 644 TDNTTLEDVNLTCNEISVQGGLDLV-KAMKNKT-KLKQINVSENQFGEEG---VEEMEKL 698
T TL+ +NL N GL+++ KA+ +K L+ + + ++ F EE ++ +EK
Sbjct: 862 TTCNTLKSLNLDWNAFD-HSGLEMLCKALNHKACNLEVLGLDKSLFSEESQTLLQAVEKK 920
Query: 699 MKS 701
K+
Sbjct: 921 NKN 923
>UNIPROTKB|Q96CN5 [details] [associations]
symbol:LRRC45 "Leucine-rich repeat-containing protein 45"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
GO:GO:0005813 EMBL:BC014109 IPI:IPI00060474 RefSeq:NP_659436.1
UniGene:Hs.143774 ProteinModelPortal:Q96CN5 SMR:Q96CN5
IntAct:Q96CN5 PhosphoSite:Q96CN5 DMDM:74760765 PaxDb:Q96CN5
PRIDE:Q96CN5 DNASU:201255 Ensembl:ENST00000306688 GeneID:201255
KEGG:hsa:201255 UCSC:uc002kde.3 CTD:201255 GeneCards:GC17P079981
HGNC:HGNC:28302 HPA:HPA023372 HPA:HPA023382 HPA:HPA024768
neXtProt:NX_Q96CN5 PharmGKB:PA142671505 eggNOG:NOG327240
HOGENOM:HOG000231243 HOVERGEN:HBG080193 InParanoid:Q96CN5
OMA:SDHREAL OrthoDB:EOG4W0XD0 PhylomeDB:Q96CN5 ChiTaRS:LRRC45
GenomeRNAi:201255 NextBio:90107 Bgee:Q96CN5 CleanEx:HS_LRRC45
Genevestigator:Q96CN5 GermOnline:ENSG00000169683 Uniprot:Q96CN5
Length = 670
Score = 124 (48.7 bits), Expect = 0.00051, P = 0.00051
Identities = 38/155 (24%), Positives = 74/155 (47%)
Query: 547 LENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTI-TY 605
L EGA +L L +++ N + G AL ++NK+++ L L N++ T+
Sbjct: 70 LSEEGATLLLRGLCANTVLRFLDLKGNNLRAAGAEALGKLLQQNKSIQSLTLEWNSLGTW 129
Query: 606 KGAIP-LGQALSKLPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGG 664
A L+ +L L+L + + GA +A L NTTL+ ++L N + + GG
Sbjct: 130 DDAFATFCGGLAANGALQRLDLRNNQISHKGAEELALALKGNTTLQQLDLRWNNVGLLGG 189
Query: 665 LDLVKAMKNKTKLKQINVSENQFGEEGVEEMEKLM 699
L+ + + L +++++ N + + +E+ M
Sbjct: 190 RALMNCLPSNRTLWRLDLAGNNIPGDVLRAVEQAM 224
>UNIPROTKB|F2Z321 [details] [associations]
symbol:NLRP12 "NACHT, LRR and PYD domains-containing
protein 12" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005524
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HGNC:HGNC:22938 EMBL:AC008753 IPI:IPI00647656
ProteinModelPortal:F2Z321 SMR:F2Z321 Ensembl:ENST00000345770
UCSC:uc010eqx.3 ArrayExpress:F2Z321 Bgee:F2Z321 Uniprot:F2Z321
Length = 1005
Score = 126 (49.4 bits), Expect = 0.00052, P = 0.00052
Identities = 74/304 (24%), Positives = 128/304 (42%)
Query: 372 GQDSTKLSFAGQGLKLDNKEDAKVIVDAINEVKV--------LVSLNLEGNTLGVNAAKA 423
G+D + S L + + + V++DA +E L+ L+L N LG K
Sbjct: 674 GEDRARCSAGAHTLLVQLRPERTVLLDAYSEHLAAALCTNPNLIELSLYRNALGSRGVKL 733
Query: 424 IADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQAGARLVELDLSDNAFGPIG 483
+ L +H + K +++ R + A L L A L +DLS N G G
Sbjct: 734 LCQGL-RHPNCKL---QNLRLKRCRIS-SSACEDLSAALI-ANKNLTRMDLSGNGVGFPG 787
Query: 484 VEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCYESSKKEGS-PLALKVFIA 542
+ L + LR C + C+L S A C E + G+ P +++ +
Sbjct: 788 MMLLCEGLRHPQC--------RLQMIQLRKCQLESGA---CQEMASVLGTNPHLVELDLT 836
Query: 543 GRNRLENEGAKMLAAVFKK-LKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDN 601
G N LE+ G ++L + + L + + + L+ N++LR L+L+ N
Sbjct: 837 G-NALEDLGLRLLCQGLRHPVCRLRTLWLKICRLTAAACDELASTLSVNQSLRELDLSLN 895
Query: 602 TITYKGAIPLGQALSKLPS--LAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEI 659
+ G + L + L + P+ L L LG C L SA ++ L N L +++L+ N++
Sbjct: 896 ELGDLGVLLLCEGL-RHPTCKLQTLRLGICRLGSAACEGLSVVLQANHNLRELDLSFNDL 954
Query: 660 SVQG 663
G
Sbjct: 955 GDWG 958
>ZFIN|ZDB-GENE-071116-6 [details] [associations]
symbol:ciita "class II, major histocompatibility
complex, transactivator" species:7955 "Danio rerio" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR008095
PRINTS:PR01719 ZFIN:ZDB-GENE-071116-6 GO:GO:0005524 GO:GO:0006355
InterPro:IPR007111 PROSITE:PS50837 CTD:4261 KO:K08060
GeneTree:ENSGT00660000095240 EMBL:CU695195 IPI:IPI00859206
RefSeq:XP_001343072.2 UniGene:Dr.114302 UniGene:Dr.156689
Ensembl:ENSDART00000130281 GeneID:100003537 KEGG:dre:100003537
NextBio:20785877 Uniprot:E7F3F4
Length = 1044
Score = 125 (49.1 bits), Expect = 0.00069, P = 0.00069
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 558 VFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNLNDNTITYKGAIPLGQALSK 617
V L++L +++ +N I G LS + L+ L L+ N I G L QAL+
Sbjct: 897 VLPSLQSLLCLDLDKNHIGDSGAEKLSGVLHFLECLKLLILSQNLIGDAGVGKLAQALAS 956
Query: 618 LPSLAILNLGDCLLKSAGASSIAKYLTDNTTLEDVNLTCNEISVQGGLDLVKAMKNKTKL 677
+PSL L L + +GA +A L D +L+D+++ N+ + G L A+KN +
Sbjct: 957 VPSLQTLRLYGNAIADSGAEHLALALPDMKSLQDLDVKFNKFTDIGATKLSAALKNCPGM 1016
Query: 678 KQINVSENQFGEEGVEEMEKLMKS 701
K + + N GV E +L S
Sbjct: 1017 KSLELWNNCI-PYGVFEHLRLQDS 1039
>UNIPROTKB|Q647I9 [details] [associations]
symbol:NLRP5 "NACHT, LRR and PYD domains-containing protein
5" species:9913 "Bos taurus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0017111
Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
PROSITE:PS50837 HOGENOM:HOG000294064 HOVERGEN:HBG063656 HSSP:P10775
EMBL:AY721594 IPI:IPI00685152 RefSeq:NP_001007815.1
UniGene:Bt.36110 ProteinModelPortal:Q647I9 STRING:Q647I9
PRIDE:Q647I9 GeneID:493717 KEGG:bta:493717 CTD:126206
eggNOG:NOG147585 InParanoid:Q647I9 OrthoDB:EOG44XJG0
NextBio:20865463 Uniprot:Q647I9
Length = 1098
Score = 125 (49.1 bits), Expect = 0.00074, P = 0.00074
Identities = 68/284 (23%), Positives = 114/284 (40%)
Query: 406 LVSLNLEGNTLGVNAAKAIADALSKHEHFKRALWKDMFTGRMKTEIPDALRYLGNGLQQA 465
L SL+L GN + K++ DAL + L G D L ++
Sbjct: 795 LKSLSLTGNKVADQGVKSLCDALKVTPCTLQKLILGS-CGLTAATCQDLASAL---IENQ 850
Query: 466 GARLVELDLSDNAFGPIGVEGLADLLRSSCCFAXXXXXXXXXXXXITGCKLLSKALHDCY 525
G L L LS + G G+ L ++ S C + GC L+ AL
Sbjct: 851 G--LTHLSLSGDELGSKGMSLLCRAVKLSSC-GLQKLALNACSLDVAGCGFLAFAL---- 903
Query: 526 ESSKKEGSPLALKVFIAGRNRLENEGAKMLAAVFKKLKT-LERVEMPQNGIYHVGITALS 584
+ + L+L + N LE+ G +L V + L +++ + +LS
Sbjct: 904 -MGNRHLTHLSLSM-----NPLEDPGMNLLCEVMMEPSCPLRDLDLVNCRLTASCCKSLS 957
Query: 585 DAFEENKNLRHLNLNDNTITYKGAIPLGQALSKLPSLAILNLGDCLLKSAGASSIAKYLT 644
+ + LR L+L N + +G L + L + +L L L C L S G +++ LT
Sbjct: 958 NVITRSPRLRSLDLAANALGDEGIAALCEGLKQKNTLTRLGLEACGLTSEGCKALSAALT 1017
Query: 645 DNTTLEDVNLTCNEISVQGGLDLVKAMKNKTK-LKQINVSENQF 687
+ L +NL N++ +G L A + T L+ I + + Q+
Sbjct: 1018 CSRHLASLNLMRNDLGPRGMTTLCSAFMHPTSNLQTIGLWKEQY 1061
>UNIPROTKB|E9PMJ3 [details] [associations]
symbol:RNH1 "Ribonuclease inhibitor" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
EMBL:AC137894 HGNC:HGNC:10074 ChiTaRS:RNH1 IPI:IPI00983412
ProteinModelPortal:E9PMJ3 SMR:E9PMJ3 PRIDE:E9PMJ3
Ensembl:ENST00000529306 ArrayExpress:E9PMJ3 Bgee:E9PMJ3
Uniprot:E9PMJ3
Length = 189
Score = 111 (44.1 bits), Expect = 0.00095, P = 0.00095
Identities = 36/142 (25%), Positives = 61/142 (42%)
Query: 553 KMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENK-NLRHLNLNDNTITYKGAIPL 611
K +++ + L + + N + VG+ + + ++ L+L + +T G L
Sbjct: 46 KDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 105
Query: 612 GQALSKLPSLAILNLGDCLLKSAGASSIAKYLTD-NTTLEDVNLTCNEISVQGGLDLVKA 670
L LP+L L+L D LL AG + + L D LE + L +S L
Sbjct: 106 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165
Query: 671 MKNKTKLKQINVSENQFGEEGV 692
++ K K++ VS N E GV
Sbjct: 166 LRAKPDFKELTVSNNDINEAGV 187
>UNIPROTKB|F1NNA4 [details] [associations]
symbol:FBXL7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005813
GO:GO:0000086 GO:GO:0007067 GO:GO:0008283 SUPFAM:SSF81383
GO:GO:0019005 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0031146 OMA:LMLETVI EMBL:AADN02007618
IPI:IPI00583555 Ensembl:ENSGALT00000021147 Uniprot:F1NNA4
Length = 376
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 47/164 (28%), Positives = 80/164 (48%)
Query: 539 VFIAGRNRLENEGAKMLAAVFKKLKTLERVEMPQNGIYHVGITALSDAFEENKNLRHLNL 598
V ++G RL + G +A +L+ LE +G Y++ A+ D NL HL++
Sbjct: 92 VIVSGCRRLTDRGLYTIAQCCPELRRLE-----VSGCYNISNEAVFDVVSLCPNLEHLDV 146
Query: 599 NDNTI--TYKGAIPLGQALSKLPSLAILNLGDC-LLKSAGASSIAKYLTDNTTLEDVNLT 655
+ I T + +I L K S+ L++ DC +L+ G +IA + T T L
Sbjct: 147 SVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHL--YLRR 204
Query: 656 CNEISVQGGLDLVKAMKNKTKLKQINVSENQFGEE-GVEEMEKL 698
C I+ +G L M T +K+++VS+ +F + G+ E+ KL
Sbjct: 205 CVRITDEG---LRYLMIYCTSIKELSVSDCRFVSDFGMREIAKL 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 999 802 0.00097 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 618 (66 KB)
Total size of DFA: 351 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 64.06u 0.10s 64.16t Elapsed: 00:00:18
Total cpu time: 64.10u 0.10s 64.20t Elapsed: 00:00:20
Start: Thu Aug 15 12:03:24 2013 End: Thu Aug 15 12:03:44 2013
WARNINGS ISSUED: 1