BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18079
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing protein 1 OS=Pongo abelii
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ARCDA SFESVRCTF V +GVWYYE + ++GVMQIGWAT+ SKFLNHEGYGIGDDEYS
Sbjct: 339 EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYS 398
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
AYDGCRQLIW++A+S+ P W GD +G LLD+ ++ +F+LNG + +F+
Sbjct: 399 CAYDGCRQLIWYNARSK-PHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFS 456
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MSFQQCRFNFGNKSTFLFPPSREFQCFNEHASLTDEDRIVLPRSHTQAMWTQA 53
MS+QQC FNFG K F +PPS +F FN++A LT E++I+LPR A+ Q
Sbjct: 469 MSYQQCEFNFGAKP-FKYPPSMKFSTFNDYAFLTAEEKIILPRHRRLALLKQV 520
>sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing protein 1 OS=Macaca
fascicularis GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 92/122 (75%), Gaps = 1/122 (0%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ARCDA SFESVRCTF V +GVWYYE + ++GVMQIGWAT+ SKFLNHEGYGIGDDEYS
Sbjct: 339 EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYS 398
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNV 171
AYDGCRQLIW++A+S+ P W GD +G LLD+ ++ +F+LNG + +F+
Sbjct: 399 CAYDGCRQLIWYNARSK-PHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSS 457
Query: 172 NL 173
+
Sbjct: 458 TI 459
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MSFQQCRFNFGNKSTFLFPPSREFQCFNEHASLTDEDRIVLPRSHTQAMWTQA 53
MS+QQC FNFG K F +PPS +F FN++A LT E++I+LPR A+ Q
Sbjct: 469 MSYQQCEFNFGAKP-FKYPPSMKFSTFNDYAFLTAEEKIILPRHRRLALLKQV 520
>sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing protein 1 OS=Homo sapiens
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ARCDA SFESVRCTF V +GVWYYE + ++GVMQIGWAT+ SKFLNHEGYGIGDDEYS
Sbjct: 339 EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYS 398
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
AYDGCRQLIW++A+S+ P W GD +G LLD+ ++ +F+LNG + +F+
Sbjct: 399 CAYDGCRQLIWYNARSK-PHIHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFS 456
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MSFQQCRFNFGNKSTFLFPPSREFQCFNEHASLTDEDRIVLPRSHTQAMWTQA 53
MS+QQC FNFG K F +PPS +F FN++A LT E++I+LPR A+ Q
Sbjct: 469 MSYQQCEFNFGAKP-FKYPPSMKFSTFNDYAFLTAEEKIILPRHRRLALLKQV 520
>sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus
GN=Rspry1 PE=2 SV=1
Length = 576
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ARCDA SFESVRCTF V +GVWYYE + ++GVMQIGWAT+ SKFLNHEGYGIGDDEYS
Sbjct: 339 EARCDASSFESVRCTFCVDTGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYS 398
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
AYDGCRQLIW++A+S+ P W GD +G LLD+ ++ +F+LNG + +F+
Sbjct: 399 CAYDGCRQLIWYNARSK-PHVHPCWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFS 456
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MSFQQCRFNFGNKSTFLFPPSREFQCFNEHASLTDEDRIVLPRSHTQAMWTQA 53
MS+QQC FNFG + F +PPS +F FN++A LT E++I+LPR A+ Q
Sbjct: 469 MSYQQCEFNFGARP-FKYPPSMKFSTFNDYAFLTAEEKIILPRHRRLALLKQV 520
>sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana GN=RKP PE=2
SV=2
Length = 1280
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 29 EHASLTDEDRIVLPRSHTQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQI 88
E S+ + RIV P +++ F S R + G W YE + ++G+ Q+
Sbjct: 112 EEFSICGDIRIVKPPLVLESLAL--------FSSARANACIWKGKWMYEVALETSGIQQL 163
Query: 89 GWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDV 148
GWAT F + +G G DD Y A+DG R W+ E P W GD++GC +D+
Sbjct: 164 GWATLACPFTDQKGVGDADDSY--AFDGRRVSKWN---KEAEPYGQSWVAGDVIGCCIDL 218
Query: 149 EARESVFYLNG 159
E FY NG
Sbjct: 219 NCDEIYFYRNG 229
>sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens GN=RNF123 PE=1
SV=1
Length = 1314
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 59 SFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR 118
+F ++R T V G W YE I S G+MQIGW T +F E G+GD S AYDG R
Sbjct: 120 NFGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEE--GVGDTHNSYAYDGNR 177
Query: 119 QLIWHDAKSEDPPNEG-MWHPGDILGCLLDVEARESVFYLNG 159
W+ + N G W GDI+ CL+D++ F LNG
Sbjct: 178 VRKWNVTTT----NYGKAWAAGDIVSCLIDLDDGTLSFCLNG 215
>sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus musculus GN=Rnf123 PE=2
SV=1
Length = 1314
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 59 SFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR 118
+F ++R T V G W YE I S G+MQIGW T +F E G+GD S AYDG R
Sbjct: 120 NFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEE--GVGDTHNSYAYDGNR 177
Query: 119 QLIWHDAKSEDPPNEG-MWHPGDILGCLLDVEARESVFYLNG 159
W+ + N G W GDI+ CL+D++ F LNG
Sbjct: 178 VRKWNVTTT----NYGKAWAAGDIVSCLIDLDDGTLSFCLNG 215
>sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3
Length = 5038
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 42 PRSHTQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHE 101
P + Q+RCD ++ V SG WY+E + + G M++GWA + +
Sbjct: 1055 PDQEPSQVENQSRCDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELR----P 1110
Query: 102 GYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRV 161
+G DE + ++G R WH P W PGD++GC++D+ +F LNG V
Sbjct: 1111 DVELGADELAYVFNGHRGQRWHLGSE---PFGRPWQPGDVVGCMIDLTENTIIFTLNGEV 1167
Query: 162 VAVTS 166
+ S
Sbjct: 1168 LMSDS 1172
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 28/120 (23%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGY-------------GIGDDEYSV 112
WY+E + A +++GWA EGY G+GDD YS
Sbjct: 661 WYFEVMVDEVTPFLTAQATHLRVGWALT-------EGYTPYPGAGEGWGGNGVGDDLYSY 713
Query: 113 AYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNVN 172
+DG H A+ P + + P D++ C LD+ F +NG V FN++
Sbjct: 714 GFDGLHLWTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQGVFESFNLD 773
>sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus GN=Rnf123
PE=1 SV=1
Length = 1318
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 59 SFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR 118
+F ++R + V G W YE I S G+MQIGW T +F E G+GD S AYDG R
Sbjct: 118 NFGTIRSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEE--GVGDTHNSYAYDGNR 175
Query: 119 QLIWHDAKSEDPPNEG-MWHPGDILGCLLDVEARESVFYLNG 159
W+ + N G W GDI+ CL+D++ F LNG
Sbjct: 176 VRKWNVTTT----NYGKAWAAGDIVSCLIDLDDGTLSFCLNG 213
>sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus GN=Ryr3 PE=1 SV=1
Length = 4863
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ D F V ++ V SG WY+E ++ + G M++GWA + +G D+ +
Sbjct: 1065 KVSIDKIRFFRVERSYAVKSGKWYFEFEVVTGGDMRVGWARPGCR----PDIELGADDQA 1120
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
++G R WH W PGD++GC+++++ VF LNG ++
Sbjct: 1121 FVFEGSRGQRWHQGSGYFGRT---WQPGDVVGCMINLDDASMVFTLNGELL 1168
>sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus GN=RYR1 PE=1 SV=1
Length = 5037
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 42 PRSHTQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHE 101
P + Q+R D ++ V SG WY+E + + G M++GWA + +
Sbjct: 1056 PDQEPSQVENQSRWDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELR----P 1111
Query: 102 GYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRV 161
+G DE + ++G R WH P W GD++GC++D+ +F LNG V
Sbjct: 1112 DVELGADELAYVFNGHRGQRWHLGSE---PFGRPWQSGDVVGCMIDLTENTIIFTLNGEV 1168
Query: 162 VAVTS 166
+ S
Sbjct: 1169 LMSDS 1173
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 28/122 (22%)
Query: 72 GVWYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEY 110
G WY+E + A +++GWA EGY +GDD Y
Sbjct: 660 GKWYFEVMVDEVVPFLTAQATHLRVGWALT-------EGYSPYPGGGEGWGGNGVGDDLY 712
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S +DG H A+ P + + P D++ C LD+ F +NG V FN
Sbjct: 713 SYGFDGLHLWTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGVFEAFN 772
Query: 171 VN 172
++
Sbjct: 773 LD 774
>sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus GN=Ryr1 PE=1 SV=1
Length = 5035
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 51 TQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEY 110
+Q+R D ++ V SG WY+E + + G M++GWA + + +G D+
Sbjct: 1066 SQSRGDRARIFRAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELR----PDVELGADDL 1121
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTS 166
+ ++G R WH P W GD++GC++D+ +F LNG V+ S
Sbjct: 1122 AYVFNGHRGQRWHLGSE---PFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDS 1174
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 28/122 (22%)
Query: 72 GVWYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEY 110
G WY+E + A +++GWA EGY +GDD Y
Sbjct: 661 GKWYFEVMVDEVAPFLTAQATHLRVGWALS-------EGYSPYPGGGEGWGGNGVGDDLY 713
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S +DG H A+ P + + P D++ C LD+ F +NG V FN
Sbjct: 714 SYGFDGLHLWTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGVFESFN 773
Query: 171 VN 172
++
Sbjct: 774 LD 775
>sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3
Length = 4870
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
+ D F V ++ V SG WY+E ++ + G M++GWA + +G D+ +
Sbjct: 1065 KVSIDKIRFFRVERSYAVRSGKWYFEFEVVTGGDMRVGWARPGCR----PDVELGADDQA 1120
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
++G R WH W PGD++GC+++++ +F LNG ++
Sbjct: 1121 FVFEGNRGQRWHQGSGYFGRT---WQPGDVVGCMINLDDASMIFTLNGELL 1168
>sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus GN=Ryr2 PE=1 SV=2
Length = 4953
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 66 TFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDA 125
T+ V +G WY+E + +AG M++GW+ + +G DE + A+DG + WH
Sbjct: 1086 TYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQ----PDLELGSDERAFAFDGFKAQRWHQG 1141
Query: 126 KSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
+ W GD++GC++D+ +F LNG ++
Sbjct: 1142 NEHYGRS---WQAGDVVGCMVDMNEHTMMFTLNGEIL 1175
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEYSV 112
WYYE + A +++GWA+ EGY +GDD +S
Sbjct: 666 WYYELMVDHTEPFVTAEATHLRVGWAST-------EGYSPYPGGGEEWGGNGVGDDLFSY 718
Query: 113 AYDGCRQLIWHD--AKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
+DG +W A++ PN+ + D++ C LD+ A F +NG+ V FN
Sbjct: 719 GFDGLH--LWSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFN 776
Query: 171 VN 172
++
Sbjct: 777 ID 778
>sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2 PE=1 SV=3
Length = 4967
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 66 TFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDA 125
T+ V +G WY+E + +AG M++GW+ + +G DE + A+DG + WH
Sbjct: 1093 TYAVKAGRWYFEFETVTAGDMRVGWSRPGCQ----PDQELGSDERAFAFDGFKAQRWHQG 1148
Query: 126 KSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
+ W GD++GC++D+ +F LNG ++
Sbjct: 1149 NEHYGRS---WQAGDVVGCMVDMNEHTMMFTLNGEIL 1182
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEYSV 112
WYYE + A +++GWA+ EGY +GDD +S
Sbjct: 673 WYYELMVDHTEPFVTAEATHLRVGWAST-------EGYSPYPGGGEEWGGNGVGDDLFSY 725
Query: 113 AYDGCRQLIWHD--AKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
+DG +W A++ PN+ + D++ C LD+ A F +NG+ V FN
Sbjct: 726 GFDGLH--LWSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFN 783
Query: 171 VN 172
++
Sbjct: 784 ID 785
>sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa GN=RYR1 PE=2 SV=2
Length = 5035
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 42 PRSHTQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHE 101
P + +Q+R D ++ V SG WY+E + + G M++GWA + +
Sbjct: 1056 PDQEPSQVESQSRWDRVRIFRAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELR----P 1111
Query: 102 GYGIGDDEYSVAYDGCRQLIWH-DAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGR 160
+G DE + ++G R WH ++ P W GD++GC++D+ +F LNG
Sbjct: 1112 DVELGADELAYVFNGHRGQRWHLGSELFGRP----WQSGDVVGCMIDLTENTIIFTLNGE 1167
Query: 161 VVAVTS 166
V+ S
Sbjct: 1168 VLMSDS 1173
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 46/120 (38%), Gaps = 28/120 (23%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEYSV 112
WY+E + A +++GWA EGY +GDD YS
Sbjct: 662 WYFEVMVDEVVPFLTAQATHLRVGWALT-------EGYSPYPGGGEGWGGNGVGDDLYSY 714
Query: 113 AYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNVN 172
+DG H + P + + P D++ C LD+ F +NG V FN+N
Sbjct: 715 GFDGLHLWTGHVPRLVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQGVFEAFNLN 774
>sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus GN=Ryr2 PE=1 SV=1
Length = 4966
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 66 TFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDA 125
T+ V +G WY+E + +AG M++GW+ + +G D+ + A+DG + WH
Sbjct: 1093 TYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQ----PDLELGSDDRAFAFDGFKAQRWHQG 1148
Query: 126 KSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
+ W GD++GC++D+ +F LNG ++
Sbjct: 1149 NEHYGRS---WQAGDVVGCMVDMNEHTMMFTLNGEIL 1182
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEYSV 112
WYYE + A +++GWA+ EGY +GDD +S
Sbjct: 673 WYYELMVDHTEPFVTAEATHLRVGWAST-------EGYSPYPGGGEEWGGNGVGDDLFSY 725
Query: 113 AYDGCRQLIWHD--AKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
+DG +W A++ PN+ + D++ C LD+ A F +NG+ V FN
Sbjct: 726 GFDGLH--LWSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFN 783
Query: 171 VN 172
++
Sbjct: 784 ID 785
>sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus GN=RYR2 PE=1 SV=3
Length = 4969
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 66 TFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDA 125
T+ V +G WY+E + ++G M++GW+ + +G DE + A+DG + WH
Sbjct: 1093 TYAVKAGRWYFEFEAVTSGDMRVGWSRPGCQ----PDQELGSDERAFAFDGFKAQRWHQG 1148
Query: 126 KSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVV 162
+ W GD++GC++D+ +F LNG ++
Sbjct: 1149 NEHYGRS---WQAGDVVGCMVDMNEHTMMFTLNGEIL 1182
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 32/122 (26%)
Query: 74 WYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEYSV 112
WYYE + A +++GWA+ EGY +GDD +S
Sbjct: 673 WYYELMVDHTEPFVTAEATHLRVGWAST-------EGYSPYPGGGEEWGGNGVGDDLFSY 725
Query: 113 AYDGCRQLIWHD--AKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
+DG +W A++ PN+ + D++ C LD+ A F +NG+ V FN
Sbjct: 726 GFDGLH--LWSGCIARTVSSPNQHLLRTDDVISCCLDLSAPSISFRINGQPVQGMFENFN 783
Query: 171 VN 172
++
Sbjct: 784 ID 785
>sp|Q24498|RY44_DROME Ryanodine receptor 44F OS=Drosophila melanogaster GN=Rya-r44F PE=1
SV=3
Length = 5127
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 46 TQAMWTQA-RCDAYSFESVRC--TFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEG 102
T+A+ +A R F + R + VTSG WY+E ++ ++G M++GWA + G
Sbjct: 1063 TEALLAEAQRLKFAGFRTYRVERNYAVTSGKWYFEFEVLTSGPMRVGWARADC----YPG 1118
Query: 103 YGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGM-WHPGDILGCLLDVEARESVFYLNGRV 161
+G ++ S A+DG H E + G+ + GD++GC +DV+ + F LNG +
Sbjct: 1119 AMLGSEDTSWAFDGHNVTKMHAGSIE---HFGVRYEAGDVIGCFIDVKEQTISFSLNGEL 1175
Query: 162 V 162
+
Sbjct: 1176 L 1176
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 37/125 (29%)
Query: 74 WYYETKI----RSAGVM---QIGWATKKSKFLNHEGY-------------GIGDDEYSVA 113
WY+E + ++ +M +IGWA N GY G+GDD YS
Sbjct: 666 WYFEVTMDHIEQTTHMMPHLRIGWA-------NTSGYVPYPGGGKKWGGNGVGDDLYSFG 718
Query: 114 YDGC------RQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSH 167
+DG R+ + DA E+P GD++G +D+ F NG V +
Sbjct: 719 FDGAFLWTGGRKTLVVDALPEEP----FIRKGDVIGVAIDLSVPIITFTFNGVKVRGSFR 774
Query: 168 LFNVN 172
FN++
Sbjct: 775 DFNLD 779
>sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus GN=Ryr1 PE=2 SV=1
Length = 5035
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 42 PRSHTQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHE 101
P + +Q+R D ++ V SG WY+E + + G ++GWA + +
Sbjct: 1057 PDQEPSQVDSQSRGDRARIFRAEKSYAVQSGRWYFEFEAVTTG-RELGWARPELR----P 1111
Query: 102 GYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRV 161
+G D+ + ++G R WH P W GD++GC++D+ +F LNG V
Sbjct: 1112 DVELGADDLAYVFNGHRGQRWHLGSE---PFGRPWQSGDVVGCMIDLTENTIIFTLNGEV 1168
Query: 162 VAVTS 166
+ S
Sbjct: 1169 LMSDS 1173
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 28/122 (22%)
Query: 72 GVWYYETKI--------RSAGVMQIGWATKKSKFLNHEGYG-------------IGDDEY 110
G WY+E + A +++GWA EGY +GDD Y
Sbjct: 661 GKWYFEVMVDEVAPFLTAQATHLRVGWALS-------EGYSPYPGGGEGWGGNGVGDDLY 713
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S +DG H A+ P + + P D++ C LD+ F +NG V FN
Sbjct: 714 SYGFDGLHLWTGHVARPVTSPGQHLLGPEDVVSCCLDLSVPSISFRINGCPVQGVFESFN 773
Query: 171 VN 172
++
Sbjct: 774 LD 775
>sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculus PE=1 SV=1
Length = 4872
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 33/124 (26%)
Query: 52 QARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWA------------TKKSKFLN 99
+ D F V ++ V SG WY+E ++ + G M++GWA K L
Sbjct: 1065 KVSIDKIRFFRVERSYAVRSGKWYFEFEVVTGGDMRVGWARPGCRPDIELGPMTKPLCLK 1124
Query: 100 HEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEGM-WHPGDILGCLLDVEARESVFYLN 158
G +G + G+ W PGD++GC+++++ +F LN
Sbjct: 1125 AAGASVGTKVVGIL--------------------GVPWQPGDVVGCMINLDDASMIFTLN 1164
Query: 159 GRVV 162
G ++
Sbjct: 1165 GELL 1168
>sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=Dictyostelium
discoideum GN=ddx1 PE=3 SV=1
Length = 765
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 63 VRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIW 122
++ T ++SG +YYE+ +R G+ +IG+A KKS IG D++S Y G +
Sbjct: 129 IKATKGISSGKFYYESIVRDEGLCRIGFALKKSS------RNIGTDKFSWGYGGTGKKS- 181
Query: 123 HDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGR 160
H++K D + D++GC ++ + F NG+
Sbjct: 182 HESKFIDYGKP--FGNNDVIGCYINFDEEIIGFTKNGQ 217
>sp|Q5ZHV7|SPRY7_CHICK SPRY domain-containing protein 7 OS=Gallus gallus GN=SPRYD7 PE=2
SV=1
Length = 196
Score = 37.0 bits (84), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 75 YYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG 134
Y+E KI+S G+ IG AT+K+ N +G D +S+ L +++ + P
Sbjct: 66 YFEFKIQSTGIWGIGVATQKA---NLNQIPLGRDVHSLVMRNDGALYYNNEEKNRLPANS 122
Query: 135 MWHPGDILGCLLDVEARESVFYLNGR 160
+ GD++G D E YLNG+
Sbjct: 123 LPQEGDVVGITYD--HVELNVYLNGK 146
>sp|Q5W111|SPRY7_HUMAN SPRY domain-containing protein 7 OS=Homo sapiens GN=SPRYD7 PE=1
SV=2
Length = 196
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 75 YYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG 134
Y+E KI+S G+ IG AT+K +N +G D +S+ L ++ + P
Sbjct: 66 YFEFKIQSTGIWGIGVATQK---VNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPANS 122
Query: 135 MWHPGDILGCLLDVEARESVFYLNGR 160
+ GD++G D E YLNG+
Sbjct: 123 LPQEGDVVGITYD--HVELNVYLNGK 146
>sp|Q2T9X3|SPRY7_BOVIN SPRY domain-containing protein 7 OS=Bos taurus GN=SPRYD7 PE=2 SV=1
Length = 196
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 75 YYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG 134
Y+E KI+S G+ IG AT+K +N +G D +S+ L ++ + P
Sbjct: 66 YFEFKIQSTGIWGIGVATQK---VNLNQIPLGRDVHSLVMRNDGALYHNNEEKNRLPANS 122
Query: 135 MWHPGDILGCLLDVEARESVFYLNGR 160
+ GD++G D E YLNG+
Sbjct: 123 LPQEGDVVGITYD--HVELNVYLNGK 146
>sp|Q5M7T2|SPRY7_RAT SPRY domain-containing protein 7 OS=Rattus norvegicus GN=Spryd7
PE=2 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 75 YYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG 134
Y+E KI+S G+ IG AT+K +N +G D +S+ L ++ + P
Sbjct: 66 YFEFKIQSTGIWGIGVATQK---VNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPANS 122
Query: 135 MWHPGDILGCLLDVEARESVFYLNGR 160
+ GD++G D E YLNG+
Sbjct: 123 LPQEGDVVGITYD--HVELNVYLNGK 146
>sp|Q3TFQ1|SPRY7_MOUSE SPRY domain-containing protein 7 OS=Mus musculus GN=Spryd7 PE=2
SV=2
Length = 196
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 75 YYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG 134
Y+E KI+S G+ IG AT+K +N +G D +S+ L ++ + P
Sbjct: 66 YFEFKIQSTGIWGIGVATQK---VNLNQIPLGRDMHSLVMRNDGALYHNNEEKNRLPANS 122
Query: 135 MWHPGDILGCLLDVEARESVFYLNGR 160
+ GD++G D E YLNG+
Sbjct: 123 LPQEGDVVGITYD--HVELNVYLNGK 146
>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSAG---VMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG +T+ G YG GDD +
Sbjct: 56 SVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGH 115
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 116 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAF---- 160
Query: 171 VNLPP 175
+LPP
Sbjct: 161 TDLPP 165
>sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster GN=Ddx1
PE=2 SV=1
Length = 727
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 25/125 (20%)
Query: 54 RCDAYSFE---SVRCTFEVT-SGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDE 109
RC + F+ R T V G +Y+E + G+ ++GW+T+++
Sbjct: 108 RCQSREFKEWHGCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQA-------------- 153
Query: 110 YSVAYDGCRQLIWHDAKSEDPPNEGM------WHPGDILGCLLDVEARESVFYLNGRVVA 163
++ CR + N + D++GCLLD++ +E F NG+ +
Sbjct: 154 -NLDLGTCRMGFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQEVSFTKNGQNLG 212
Query: 164 VTSHL 168
V L
Sbjct: 213 VAFRL 217
>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1
Length = 548
Score = 33.9 bits (76), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSAG---VMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG +T+ G YG GDD +
Sbjct: 56 SVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGH 115
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 116 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAF---- 160
Query: 171 VNLPP 175
+LPP
Sbjct: 161 TDLPP 165
>sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dictyostelium discoideum
GN=splA PE=1 SV=3
Length = 2410
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 63 VRCTFEVTSGVWYYETKIRS--AGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQL 120
VR T G Y+E I G + IG A + H G+ Y D R+
Sbjct: 1075 VRATQPFGEGFCYFEVIIDQLDKGQLSIGLANLEYPTFYHVGWM--PRSYGYHNDDGRKF 1132
Query: 121 IWHDAKSEDPPNEG-----MWHPGDILGCLLDVEARESVFYLNGRVVAVT-SHLFNVNLP 174
W + E NEG + GDI+GC L +RE F NG + S+++ V P
Sbjct: 1133 RW---REEPGVNEGESYGSSYKKGDIIGCGLSFTSREIFFTKNGMYLGTAFSNVYGVFYP 1189
>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1
Length = 604
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSAG---VMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 77 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 136
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + V
Sbjct: 137 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAF---- 181
Query: 171 VNLPP 175
+LPP
Sbjct: 182 TDLPP 186
>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1
Length = 597
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + GV+Y+E KI S G M IG + + G YG GDD +
Sbjct: 83 SVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 142
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 143 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAF---- 187
Query: 171 VNLPP 175
+LPP
Sbjct: 188 TDLPP 192
>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1
Length = 620
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 22/125 (17%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 89 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 148
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 149 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP 197
Query: 171 VNLPP 175
NL P
Sbjct: 198 ANLYP 202
>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1
Length = 729
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 201 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 260
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 261 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAF---- 305
Query: 171 VNLPP 175
+LPP
Sbjct: 306 TDLPP 310
>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1
Length = 620
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 22/125 (17%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 89 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 148
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 149 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP 197
Query: 171 VNLPP 175
NL P
Sbjct: 198 ANLYP 202
>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1
Length = 653
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 126 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 185
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 186 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAF---- 230
Query: 171 VNLPP 175
+LPP
Sbjct: 231 TDLPP 235
>sp|Q5M929|RN135_RAT E3 ubiquitin-protein ligase RNF135 OS=Rattus norvegicus GN=Rnf135
PE=2 SV=1
Length = 415
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 17/148 (11%)
Query: 14 STFLFPPSREFQCFNEHASLTDEDRIV-LPRSHTQAMWTQARCDAYSFESVRCTFEVTSG 72
S + P+ + + + + +++ R+V + R+ W+ R +S V C+ +SG
Sbjct: 242 SLWAISPTFDLRSLSCNLEVSNNCRMVTVSRALQPYHWSSER---FSISQVLCSQAFSSG 298
Query: 73 VWYYETKIRSAGVMQIG---WATKKSKFLNHEGYGIGDDEYSVAYDGCRQL-IWHDAKSE 128
Y+E R+ +G W K+ K L G D + + + G Q W K
Sbjct: 299 QKYWEVDTRNCSHWAVGVASWGMKRDKML-----GRTMDSWCIEWRGPSQFSAWAMMKKT 353
Query: 129 DPPNEGMWHPGDILGCLLDVEARESVFY 156
D + P +++G LD+E + FY
Sbjct: 354 DLSS----GPPEVVGVWLDLELGKLAFY 377
>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2
Length = 620
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 22/125 (17%)
Query: 62 SVRCTFEVTS--GVWYYETKIRSA---GVMQIGWATKKSKFLNHEG-----YGI-GDDEY 110
SVR T + + G++Y+E KI S G M IG + + G YG GDD +
Sbjct: 89 SVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGH 148
Query: 111 SVAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170
S G Q P + GD++GC +++ + NG + +
Sbjct: 149 SFCSSGTGQ-----------PYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP 197
Query: 171 VNLPP 175
NL P
Sbjct: 198 ANLYP 202
>sp|Q505D9|TRI67_MOUSE Tripartite motif-containing protein 67 OS=Mus musculus GN=Trim67
PE=2 SV=1
Length = 768
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Query: 53 ARCDAYSFESVRCTFEVTSGVWYYETKI-RSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
A C +Y V T + GV Y+E + R + ++ + G D ++
Sbjct: 615 ATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKDDKAWA 674
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVT--SHLF 169
+ D R H S EG G +G LLD+ F++NG+ T SH+
Sbjct: 675 MYVDNNRSWFMH-CNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVD 733
Query: 170 NVNLP 174
V +P
Sbjct: 734 GVFMP 738
>sp|Q6ZTA4|TRI67_HUMAN Tripartite motif-containing protein 67 OS=Homo sapiens GN=TRIM67
PE=2 SV=3
Length = 783
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Query: 53 ARCDAYSFESVRCTFEVTSGVWYYETKI-RSAGVMQIGWATKKSKFLNHEGYGIGDDEYS 111
A C +Y V T + GV Y+E + R + ++ + G D ++
Sbjct: 630 ATCSSYDDRVVLGTAAFSKGVHYWELHVDRYDNHPDPAFGVARASVVKDMMLGKDDKAWA 689
Query: 112 VAYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVT--SHLF 169
+ D R H S EG G +G LLD+ F++NG+ T SH+
Sbjct: 690 MYVDNNRSWFMH-CNSHTNRTEGGVCKGATVGVLLDLNKHTLTFFINGQQQGPTAFSHVD 748
Query: 170 NVNLP 174
V +P
Sbjct: 749 GVFMP 753
>sp|Q9FH99|FB302_ARATH F-box protein At5g67140 OS=Arabidopsis thaliana GN=At5g67140 PE=2
SV=1
Length = 228
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 58 YSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGC 117
Y S RC + S + T I +GV+Q+ T + LN G I D+ + C
Sbjct: 94 YQIASARCVSNLNSVSLWGMTAITDSGVVQLISRTSSLQHLNIGGTFITDESLFAIAERC 153
Query: 118 RQL 120
QL
Sbjct: 154 HQL 156
>sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus gallus GN=DDX1 PE=1 SV=1
Length = 740
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 64 RCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWH 123
R T VT G +YYE G+ ++GW+T ++ + H
Sbjct: 123 RATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKS-------H 175
Query: 124 DAKSEDPPNEGMWHPGDILGCLLDVEARESVFYLNGR 160
+ + + E H D +GC LD++ + F NG+
Sbjct: 176 NKQFDSYGEEFTMH--DTIGCYLDIDKGQIKFSKNGK 210
>sp|Q8IUD6|RN135_HUMAN E3 ubiquitin-protein ligase RNF135 OS=Homo sapiens GN=RNF135 PE=1
SV=2
Length = 432
Score = 30.4 bits (67), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 55 CDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIG---WATKKSKFLNHEGYGIGDDEYS 111
C+ +S V C+ ++SG Y+E R+ +G W + + L G D
Sbjct: 294 CERFSTSQVLCSQALSSGKHYWEVDTRNCSHWAVGVASWEMSRDQVL-----GRTMDSCC 348
Query: 112 VAYDGCRQL-IWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFY 156
V + G QL WH K G PG ++G L++E + FY
Sbjct: 349 VEWKGTSQLSAWHMVKET---VLGSDRPG-VVGIWLNLEEGKLAFY 390
>sp|Q9CWS1|RN135_MOUSE E3 ubiquitin-protein ligase RNF135 OS=Mus musculus GN=Rnf135 PE=2
SV=1
Length = 417
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 50 WTQARCDAYSFESVRCTFEVTSGVWYYETKIRSAGVMQIG---WATKKSKFLNHEGYGIG 106
W+ R +S V C+ ++SG Y+E R+ IG W K+ L G
Sbjct: 277 WSPQR---FSISQVFCSQALSSGQKYWEVDTRNCSHWAIGVASWGMKRDGML-----GRT 328
Query: 107 DDEYSVAYDGCRQL-IWHDAKSEDPPNEGMWHPGDILGCLLDVEARESVFY 156
D + + + G Q W K D ++ +++G LD+E+ E FY
Sbjct: 329 MDSWCIEWRGPGQFSAWAKMKKTDLQSDL----PEVVGVWLDLESGELAFY 375
>sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo
sapiens GN=HNRNPUL2 PE=1 SV=1
Length = 747
Score = 29.6 bits (65), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 21/115 (18%)
Query: 63 VRCTFEVTSGVWYYETKIRS----------AGVMQIGWATKKSKFLNHEGYGIGDDEYSV 112
R T+ VT G +E K+ ++++GW+ S+ +G+DE+S
Sbjct: 281 ARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSRPQ------LGEDEFSY 334
Query: 113 AYDGCRQLIWHDAKSEDPPNEGMWHPGDILGCLLDVEARES--VFYLNGRVVAVT 165
+DG R L + + E+ + D++GC + E E F NG + V
Sbjct: 335 GFDG-RGLKAENGQFEEFGQ--TFGENDVIGCFANFETEEVELSFSKNGEDLGVA 386
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,869,439
Number of Sequences: 539616
Number of extensions: 2864260
Number of successful extensions: 4423
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4320
Number of HSP's gapped (non-prelim): 88
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)