Query psy18079
Match_columns 178
No_of_seqs 159 out of 999
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 22:06:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18079.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18079hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3toj_A SET1/ASH2 histone methy 100.0 3.6E-31 1.2E-35 212.2 14.3 118 46-170 26-154 (213)
2 2yyo_A SPRY domain-containing 100.0 3.8E-31 1.3E-35 205.6 11.4 115 51-170 18-140 (171)
3 2jk9_A SPRY domain-containing 99.9 8.6E-25 2.9E-29 174.5 13.6 115 57-171 60-185 (212)
4 3emw_A SPRY domain-containing 99.9 1.3E-23 4.5E-28 168.7 16.1 114 58-171 71-194 (217)
5 2afj_A Gene rich cluster, C9 g 99.9 1.1E-22 3.8E-27 164.0 5.6 113 58-170 68-190 (226)
6 2vok_A 52 kDa RO protein; poly 99.4 4.5E-12 1.6E-16 99.4 12.2 95 58-158 48-144 (188)
7 2fbe_A Predicted: similar to R 99.3 1E-11 3.5E-16 98.3 12.2 94 58-157 49-145 (201)
8 2wl1_A Pyrin, marenostrin; amy 99.3 6.7E-12 2.3E-16 98.6 10.6 94 58-157 52-148 (191)
9 3uv9_A TRIM5alpha, tripartite 99.3 1.1E-11 3.9E-16 96.9 9.6 96 60-156 38-145 (186)
10 3kb5_A Tripartite motif-contai 99.2 9E-11 3.1E-15 92.3 12.5 97 58-157 52-151 (193)
11 4b3n_A Maltose-binding peripla 98.8 6.8E-09 2.3E-13 93.5 8.4 100 57-157 455-566 (602)
12 2e63_A KIAA1787 protein; struc 98.5 7.4E-07 2.5E-11 68.6 9.2 104 63-171 40-152 (170)
13 2yue_A Protein neuralized; str 97.2 0.00067 2.3E-08 51.9 6.4 95 61-172 37-141 (168)
14 1wi5_A RRP5 protein homolog; S 40.6 29 0.001 23.8 3.7 34 133-166 65-101 (119)
15 3tur_A Mycobacteria tuberculos 38.0 24 0.00083 28.6 3.3 31 134-164 124-154 (287)
16 3pe9_A Fibronectin(III)-like m 36.5 43 0.0015 22.5 3.9 35 131-165 8-47 (98)
17 4doo_A Chalcone-flavanone isom 34.9 67 0.0023 24.3 5.3 30 134-164 138-167 (205)
18 4dok_A Similarity to chalcone- 28.0 37 0.0013 26.1 2.8 32 133-164 135-168 (208)
19 3uep_A YSCQ-C, type III secret 25.3 1.5E+02 0.005 19.7 5.1 30 135-165 39-68 (96)
20 1o6a_A Putative flagellar moto 23.8 1.3E+02 0.0044 19.9 4.6 30 135-165 39-68 (96)
21 2k52_A Uncharacterized protein 20.8 1.5E+02 0.005 18.5 4.3 25 134-158 44-71 (80)
22 1oq1_A Protein YESU; structura 20.7 64 0.0022 25.3 2.8 24 139-162 158-181 (223)
No 1
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.97 E-value=3.6e-31 Score=212.20 Aligned_cols=118 Identities=19% Similarity=0.399 Sum_probs=105.0
Q ss_pred ccccceeeecCCceeeEEEeCcceeccEEEEEEEEec---CCcEEEEEecCCCcCCCCCCCCCCCCCCceEEeCCCceEE
Q psy18079 46 TQAMWTQARCDAYSFESVRCTFEVTSGVWYYETKIRS---AGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIW 122 (178)
Q Consensus 46 ~~~~~~~~~~~~~~~~~vrat~~v~~G~~YfEV~v~~---~~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~g~~~~~~ 122 (178)
...+++.++. ...|.+|||++++.+|+|||||+|.. .++++|||+++.++++ .++|++.+||+|++.++++|
T Consensus 26 ls~d~l~v~~-~~~~~~vra~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~----~~~G~d~~S~gy~~~~G~~~ 100 (213)
T 3toj_A 26 ISDDRLTVVG-EKGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQ----APLGYDKFSYSWRSKKGTKF 100 (213)
T ss_dssp ECTTSSEEEC-CSSCEEEEESCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTT----SCTTSSTTEEEEETTTTCEE
T ss_pred EcCCCcEEEe-CCceeEEEeCCCccCCeEEEEEEEeecCCCceEEEEeccCCcccc----cCCCCCCCcEEEECCCCeEE
Confidence 3445566654 57899999999999999999999998 6899999999998764 57999999999998888999
Q ss_pred eCCCCCCCCCCCCCCCCCEEEEEEeCCC--------CEEEEEECCEEeecccccCC
Q psy18079 123 HDAKSEDPPNEGMWHPGDILGCLLDVEA--------RESVFYLNGRVVAVTSHLFN 170 (178)
Q Consensus 123 ~~~~~~~~~yg~~~~~GDVIGc~lDl~~--------g~i~F~~NG~~lG~Af~~~~ 170 (178)
|++... .|+++|.+||||||+||+++ ++|+||+||+.||+||+++.
T Consensus 101 h~~~~~--~yg~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF~~~~ 154 (213)
T 3toj_A 101 HQSIGK--HYSSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAYKDIF 154 (213)
T ss_dssp ETTEEE--CCSCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEEESCC
T ss_pred eCCcCc--ccCCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeEEcCC
Confidence 987654 79999999999999999998 79999999999999999885
No 2
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=205.58 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=100.9
Q ss_pred eeeecCCceeeEEEeCcceeccEEEEEEEEecC---CcEEEEEecCCCcCCCCCCCCCCCCCCceEEeCCCceEEeCCCC
Q psy18079 51 TQARCDAYSFESVRCTFEVTSGVWYYETKIRSA---GVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCRQLIWHDAKS 127 (178)
Q Consensus 51 ~~~~~~~~~~~~vrat~~v~~G~~YfEV~v~~~---~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~g~~~~~~~~~~~ 127 (178)
+........|.+|||++++.+|+|||||+|.+. ++++|||++..++++ .++|++..||||+++++++||+...
T Consensus 18 l~~~~~~~~~~~vra~~p~~~g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~----~~~G~d~~S~gy~~~dG~~~~~~~~ 93 (171)
T 2yyo_A 18 LSYHGNSGEVGCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLD----HQPGWLPDSVAYHADDGKLYNGRAK 93 (171)
T ss_dssp EEECCCSSCCEEEECSSCCCSSSCEEEEEEEEETTTCCCEEEEECTTCCTT----SCTTSSTTCEEEETTTCCEESSSSC
T ss_pred EEEeCCCCceeEEEECCCCCCCCEEEEEEEEECCCCcEEEEEecCCCCCCc----cCCCccCCEEEEEcCCCeEEeCCCC
Confidence 444444568999999999999999999999974 899999999998875 4689999999999998899997532
Q ss_pred CCCCCCCCCCCCCEEEEEEeCC-----CCEEEEEECCEEeecccccCC
Q psy18079 128 EDPPNEGMWHPGDILGCLLDVE-----ARESVFYLNGRVVAVTSHLFN 170 (178)
Q Consensus 128 ~~~~yg~~~~~GDVIGc~lDl~-----~g~i~F~~NG~~lG~Af~~~~ 170 (178)
.. .|+++|.+||||||+||++ +++|+|||||+.||+||+++.
T Consensus 94 ~~-~yg~~f~~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~~~ 140 (171)
T 2yyo_A 94 GR-QFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMS 140 (171)
T ss_dssp CB-CCSCCCCTTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEESSC
T ss_pred CC-cCCCCCCCCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecCCc
Confidence 22 7999999999999999998 499999999999999999985
No 3
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=99.92 E-value=8.6e-25 Score=174.55 Aligned_cols=115 Identities=18% Similarity=0.222 Sum_probs=97.3
Q ss_pred CceeeEEEeCcceeccEEEEEEEEec---CCcEEEEEecCCCcCCC-CCCCCCCCCCCceEEeCCCceEEeCCCCCC---
Q psy18079 57 AYSFESVRCTFEVTSGVWYYETKIRS---AGVMQIGWATKKSKFLN-HEGYGIGDDEYSVAYDGCRQLIWHDAKSED--- 129 (178)
Q Consensus 57 ~~~~~~vrat~~v~~G~~YfEV~v~~---~~~~~VG~a~~~~~l~~-~~~~~vG~d~~S~g~~g~~~~~~~~~~~~~--- 129 (178)
...|.+||++.++++|+|||||+|.. .+.++||||++.+.++. .....+|.+..||+|+..++++||++....
T Consensus 60 ~~~~~~Vlg~~~f~sGrhYWEV~v~~~~~~~~w~vGV~~~~~~r~~~g~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~ 139 (212)
T 2jk9_A 60 AQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKT 139 (212)
T ss_dssp TTEEEEEEESCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCCEEESSCCCTTSSTTEEEEETTTTEEEESTTTSCCEE
T ss_pred CCccceEEcCCCccCCeEEEEEEEecccCCCcEEEEEEcCCccccccCcccccccCCCcEeeECCCCcEEECCcccCccc
Confidence 35789999999999999999999984 67899999999987531 123568999999999987788999875421
Q ss_pred C----CCCCCCCCCCEEEEEEeCCCCEEEEEECCEEeecccccCCC
Q psy18079 130 P----PNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNV 171 (178)
Q Consensus 130 ~----~yg~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~Af~~~~~ 171 (178)
. .+++.|.++|+|||+||+++|+|+||+||+.++.||+++..
T Consensus 140 ~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~~~ 185 (212)
T 2jk9_A 140 YPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKG 185 (212)
T ss_dssp SSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCTT
T ss_pred cCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccCCC
Confidence 0 25778899999999999999999999999999999998754
No 4
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=99.91 E-value=1.3e-23 Score=168.74 Aligned_cols=114 Identities=17% Similarity=0.153 Sum_probs=96.0
Q ss_pred ceeeEEEeCcceeccEEEEEEEEecC---CcEEEEEecCCCcCCCC-CCCCCCCCCCceEEeCCCceEEeCCCCCC-CCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRSA---GVMQIGWATKKSKFLNH-EGYGIGDDEYSVAYDGCRQLIWHDAKSED-PPN 132 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~~---~~~~VG~a~~~~~l~~~-~~~~vG~d~~S~g~~g~~~~~~~~~~~~~-~~y 132 (178)
+.|.+||++.++++|+|||||+|... +.+.||||++.+++... ....+|.+..||+|+..++.+||++.... ..|
T Consensus 71 ~~~~~Vl~~~~~~sGrhYWEV~v~~~~~g~~~~vGv~~~~~~r~~~g~~~~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~ 150 (217)
T 3emw_A 71 QSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQY 150 (217)
T ss_dssp SCEEEEEESCCBSSSEEEEEEECCGGGCTTCCEEEEECTTSCCEESSSCCCTTSSTTEEEEETTTCBEESSCCSSCCCBS
T ss_pred CCCCEEEeCCCccCccEEEEEEEcccCCCCceeEEEEcCccccccCCccccccCCCCEEEEEeCCCcEEeCCcccCCccc
Confidence 56889999999999999999999874 68999999998875321 23579999999999987778999875321 135
Q ss_pred C-----CCCCCCCEEEEEEeCCCCEEEEEECCEEeecccccCCC
Q psy18079 133 E-----GMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNV 171 (178)
Q Consensus 133 g-----~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~Af~~~~~ 171 (178)
+ +.+..+|+|||+||+++|+|+||+||+.||.||+++..
T Consensus 151 ~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~~~~ 194 (217)
T 3emw_A 151 PAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLKG 194 (217)
T ss_dssp SSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCTT
T ss_pred cccccccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEECCCC
Confidence 3 56899999999999999999999999999999999864
No 5
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=99.86 E-value=1.1e-22 Score=163.98 Aligned_cols=113 Identities=18% Similarity=0.167 Sum_probs=92.1
Q ss_pred ceeeEEEeCcceeccEEEEEEEEec---CCcEEEEEecCCCcCCCC-CCCCCCCCCCceEEeCCCceEEeCCCCCC-CCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRS---AGVMQIGWATKKSKFLNH-EGYGIGDDEYSVAYDGCRQLIWHDAKSED-PPN 132 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~---~~~~~VG~a~~~~~l~~~-~~~~vG~d~~S~g~~g~~~~~~~~~~~~~-~~y 132 (178)
+.+.+||++.++++|+|||||+|.. .+.+.||||++.+++... ....+|.+..||+|...++++||++.... ..|
T Consensus 68 ~~~~~Vlg~~~f~sGrhYWEV~V~~~~~~~~w~vGV~~~s~~~~r~~~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~ 147 (226)
T 2afj_A 68 QSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQY 147 (226)
T ss_dssp TTSSSEEECCCCCCSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCCCCSCEEEEEEGGGTSTTSSSSCCSCSSS
T ss_pred CCcCeEEECCCccCCEEEEEEEEeccCCCCCEEEEecCCccccccccccccccCCCCcEEEEcCCCeEEECccccCcccc
Confidence 3556899999999999999999987 678999999998864321 23468999999999976666888765321 123
Q ss_pred -----CCCCCCCCEEEEEEeCCCCEEEEEECCEEeecccccCC
Q psy18079 133 -----EGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFN 170 (178)
Q Consensus 133 -----g~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~Af~~~~ 170 (178)
+..+.++|+|||+||+++|+|+||+||+.||.||+++.
T Consensus 148 ~~~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~~~ 190 (226)
T 2afj_A 148 PAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLK 190 (226)
T ss_dssp SCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHHHH
T ss_pred cccccCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEcCC
Confidence 34578999999999999999999999999999999753
No 6
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=99.38 E-value=4.5e-12 Score=99.43 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=71.5
Q ss_pred ceeeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCCCCCCCCCCCCCceEEeCCC--ceEEeCCCCCCCCCCCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR--QLIWHDAKSEDPPNEGM 135 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~g~~--~~~~~~~~~~~~~yg~~ 135 (178)
..+..|+++.++++|+|||||+|...+.+.||||.+..... ....+|.+..+|...-.. ...||+.... -..
T Consensus 48 ~~~~~VLg~~~fsSGrHYWEVev~~~~~w~vGV~~~si~Rk--g~~~~~~~~~~W~l~~~~~~y~~~~~~~~~----l~~ 121 (188)
T 2vok_A 48 SNYPMVLGAQRFSSGKMYWEVDVTQKEAWDLGVCRDSVQRK--GQFSLSPENGFWTIWLWQDSYEAGTSPQTT----LHI 121 (188)
T ss_dssp CSSSEEEBSCCBSSSEEEEEEECTTCSCEEEEEEETTCCCS--SCCCCSTTTTEEEEEEETTEEEECSSSCEE----ECC
T ss_pred eeeccccccCcccCCCeEEEEEecCCceEEEEEeeCCcCCC--CccccCCCCCEEEEEEECCEEEEEeCCccC----Eec
Confidence 45778999999999999999999988899999999887632 224678889999975432 3445543211 011
Q ss_pred CCCCCEEEEEEeCCCCEEEEEEC
Q psy18079 136 WHPGDILGCLLDVEARESVFYLN 158 (178)
Q Consensus 136 ~~~GDVIGc~lDl~~g~i~F~~N 158 (178)
-....+|||.||++.|+|+||-.
T Consensus 122 ~~~~~rVGVfLDye~G~lSFY~v 144 (188)
T 2vok_A 122 QVPPCQIGIFVDYEAGVVSFYNI 144 (188)
T ss_dssp SSCCSEEEEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEEEcCCCEEEEEEC
Confidence 23468999999999999999953
No 7
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=99.34 E-value=1e-11 Score=98.34 Aligned_cols=94 Identities=17% Similarity=0.099 Sum_probs=68.9
Q ss_pred ceeeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCCCCCCCCCCCCCceEEeCCC---ceEEeCCCCCCCCCCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR---QLIWHDAKSEDPPNEG 134 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~g~~---~~~~~~~~~~~~~yg~ 134 (178)
..+..|+++.++++|+|||||+|.....+.||||.+..... ....++.+..+|...-.. ...+|+.. . .-.
T Consensus 49 ~~~~~VLg~~~fsSGrHYWEVev~~~~~w~vGV~~~si~Rk--g~~~~~~~~g~W~l~~~~~~~y~~~~~~~-~---~l~ 122 (201)
T 2fbe_A 49 DTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQ--GKIELSSEHGFLTVGCREGKVFAASTVPM-T---PLW 122 (201)
T ss_dssp SSSCEEEESCCBSSSEEEEEEECTTCSEEEEEEEETTSCCS--SCCCCCTTTTEEEEEEETTTEEEECSSSC-E---EEC
T ss_pred eeccceecCccccCCceEEEEEeCCCCEEEEEEeeCccCCC--CcccccCCCCEEEEEEeCCCEEEEEcCCc-c---cCc
Confidence 45778999999999999999999988899999999887632 123467778899975322 23333211 1 111
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEE
Q psy18079 135 MWHPGDILGCLLDVEARESVFYL 157 (178)
Q Consensus 135 ~~~~GDVIGc~lDl~~g~i~F~~ 157 (178)
.-....+|||.||++.|+|+||-
T Consensus 123 ~~~~~~rVGVfLDye~G~lSFY~ 145 (201)
T 2fbe_A 123 VSPQLHRVGIFLDVGMRSIAFYN 145 (201)
T ss_dssp CCTTCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCCEEEEEEEcCCCEEEEEe
Confidence 12356799999999999999995
No 8
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=99.34 E-value=6.7e-12 Score=98.64 Aligned_cols=94 Identities=13% Similarity=0.036 Sum_probs=69.4
Q ss_pred ceeeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCCCCCCCCCCCCCceEEe---CCCceEEeCCCCCCCCCCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYD---GCRQLIWHDAKSEDPPNEG 134 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~---g~~~~~~~~~~~~~~~yg~ 134 (178)
..+..|+++.++++|+|||||+|...+.+.||||.+..... ....++.+..+|... +.....+|+.... -.
T Consensus 52 ~~~~~VLg~~~fssGrHYWEVev~~~~~w~vGV~~~s~~Rk--g~~~~~~~~~~W~l~~~~~~~y~~~~~~~~~----l~ 125 (191)
T 2wl1_A 52 DSCIIVLGSPSFLSGRRYWEVEVGDKTAWILGACKTSISRK--GNMTLSPENGYWVVIMMKENEYQASSVPPTR----LL 125 (191)
T ss_dssp SSSCCEEEECCBCSSEEEEEEECTTCSCEEEEEEETTCCSS--SCCCCCGGGTEEEEEEEETTEEEECCSSCEE----CC
T ss_pred cccccccCcccccCCCEEEEEEeCCCCEEEEEEeeCCcCCC--CccccCCCCCEEEEEEeCCCEEEEEcCCCcc----Cc
Confidence 45678999999999999999999988899999999887632 123577778889965 3323344443211 11
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEE
Q psy18079 135 MWHPGDILGCLLDVEARESVFYL 157 (178)
Q Consensus 135 ~~~~GDVIGc~lDl~~g~i~F~~ 157 (178)
.-....+|||.||++.|+|+||-
T Consensus 126 ~~~~~~rVGVfLDye~G~lSFY~ 148 (191)
T 2wl1_A 126 IKEPPKRVGIFVDYRVGSISFYN 148 (191)
T ss_dssp CSSCCSEEEEEEETTTTEEEEEE
T ss_pred cccCCcEEEEEEEcCCCEEEEEE
Confidence 12356899999999999999994
No 9
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=99.29 E-value=1.1e-11 Score=96.94 Aligned_cols=96 Identities=18% Similarity=0.184 Sum_probs=70.5
Q ss_pred eeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCCC---CCCCCCCCCCceEEe---CCCceEEeCCCCCCCCCC
Q psy18079 60 FESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNH---EGYGIGDDEYSVAYD---GCRQLIWHDAKSEDPPNE 133 (178)
Q Consensus 60 ~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~~---~~~~vG~d~~S~g~~---g~~~~~~~~~~~~~~~yg 133 (178)
..+|+++.++++|+|||||+|...+.+.||||......... ....+|.+..+|+.. +.....||++.... ...
T Consensus 38 ~~~VLG~~~ftsGrHYWEVeV~~~~~W~vGV~~~~~~r~~~~~~~~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~-~~~ 116 (186)
T 3uv9_A 38 GTGVLGSQSITSGKHYWEVDVSKKSAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHT-PFA 116 (186)
T ss_dssp SSCEECSSCBCSSEEEEEEECTTCSCEEEEEESCSTTTTTTTHHHHTCCCGGGTEEEEEEETTTEEEEEECCCTTS-TTS
T ss_pred CCcCcCCCCCCCCCEEEEEEEcCCCcEEEEEEEEEecccccccCCCcccCCCCCEEEEEECCCCEEEEEeCCCccc-cCC
Confidence 34699999999999999999998999999999876543211 113577888899964 33345677764432 111
Q ss_pred ------CCCCCCCEEEEEEeCCCCEEEEE
Q psy18079 134 ------GMWHPGDILGCLLDVEARESVFY 156 (178)
Q Consensus 134 ------~~~~~GDVIGc~lDl~~g~i~F~ 156 (178)
..-....+|||+||+++|+|+||
T Consensus 117 ~~~~~l~~~~~p~rVGVfLDye~G~lSFY 145 (186)
T 3uv9_A 117 PFIVPLSVIICPDRVGVFVDYEACTVSFF 145 (186)
T ss_dssp CEEEECCCSSCCSEEEEEEETTTTEEEEE
T ss_pred CccCcccccccCCEEEEEeecCCCEEEEE
Confidence 12345789999999999999999
No 10
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=99.25 E-value=9e-11 Score=92.26 Aligned_cols=97 Identities=11% Similarity=0.005 Sum_probs=67.2
Q ss_pred ceeeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCCCCCCCCCCCCCceEEeCCC---ceEEeCCCCCCCCCCC
Q psy18079 58 YSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLNHEGYGIGDDEYSVAYDGCR---QLIWHDAKSEDPPNEG 134 (178)
Q Consensus 58 ~~~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~~~~~~vG~d~~S~g~~g~~---~~~~~~~~~~~~~yg~ 134 (178)
..+..|+++.++++|+|||||.|...+.+.||||.+...... ...++.+..+|...-.. ...+++..... .-..
T Consensus 52 ~~~~~VLg~~~fssGrhYWEVev~~~~~W~lGV~~~s~~Rkg--~~~~~~~~~~W~l~~~~~~~y~~~~~~~~~~-~l~~ 128 (193)
T 3kb5_A 52 DKAVAVVAHQQLSEGEHYWEVDVGDKPRWALGVIAAEAPRRG--RLHAVPSQGLWLLGLREGKILEAHVEAKEPR-ALRS 128 (193)
T ss_dssp SSSCEEEBSCCBCSSEEEEEEECTTCSSEEEEEEETTSCCSS--SCCCSGGGTEEEEEEETTTEEEECCSSSSCE-ECCC
T ss_pred ccccEEccCCcccCCCEEEEEEeCcCceEEEEEeeCCcCcCC--CcCCCCCCCEEEEEEeCCCEEEEEeCCCccE-EEee
Confidence 456789999999999999999999888999999998876321 12345566789864322 23344432110 0000
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEE
Q psy18079 135 MWHPGDILGCLLDVEARESVFYL 157 (178)
Q Consensus 135 ~~~~GDVIGc~lDl~~g~i~F~~ 157 (178)
+-....+|||.||.+.|+|+||-
T Consensus 129 ~~~~~~rVGVfLDye~G~lSFY~ 151 (193)
T 3kb5_A 129 PERRPTRIGLYLSFGDGVLSFYD 151 (193)
T ss_dssp CSSCCSEEEEEEETTTTEEEEEE
T ss_pred cCCCCCEEEEEEEcCCCEEEEEe
Confidence 01345799999999999999983
No 11
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=98.83 E-value=6.8e-09 Score=93.48 Aligned_cols=100 Identities=17% Similarity=0.171 Sum_probs=67.7
Q ss_pred CceeeEEEeCcceeccEEEEEEEEecCCcEEEEEecCCCcCCC---CCCCCCCCCCCceEEe---CCCceEEeCCCCCCC
Q psy18079 57 AYSFESVRCTFEVTSGVWYYETKIRSAGVMQIGWATKKSKFLN---HEGYGIGDDEYSVAYD---GCRQLIWHDAKSEDP 130 (178)
Q Consensus 57 ~~~~~~vrat~~v~~G~~YfEV~v~~~~~~~VG~a~~~~~l~~---~~~~~vG~d~~S~g~~---g~~~~~~~~~~~~~~ 130 (178)
...+.+|++..++++|+|||||.|.....+.||||........ .....++....+|+.. +.....||+.....
T Consensus 455 F~~~~~VLg~~~f~sGrhyWEV~v~~~~~w~~Gv~~~~~~~~~~~~~~~~~~~~~~g~w~~~~~~~~~y~~~~~~~~~~- 533 (602)
T 4b3n_A 455 FNYCTGVLGSQSITSGKHYWEVDVSKKSAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHT- 533 (602)
T ss_dssp --CCCCEEESSCBSSSEEEEEEECTTCSCEEEEEECCCCTTTSSTHHHHCCCCGGGTEEEEEEETTTEEEEEECCCSSC-
T ss_pred CCCCCEeccCCCCCCEEEEEEEEECCCeeEEEEEeeccccccccccCCCcccCCCCcEEEEEEecCCeEEEEeCCCccc-
Confidence 4567789999999999999999999999999999975433111 0012345566789864 33345667654321
Q ss_pred CCC------CCCCCCCEEEEEEeCCCCEEEEEE
Q psy18079 131 PNE------GMWHPGDILGCLLDVEARESVFYL 157 (178)
Q Consensus 131 ~yg------~~~~~GDVIGc~lDl~~g~i~F~~ 157 (178)
... ..-....+|||+||.+.|+|+||-
T Consensus 534 ~~~~~~~~l~~~~~~~rvgv~ld~~~g~~sFy~ 566 (602)
T 4b3n_A 534 PFAPFIVPLSVIICPDRVGVFVDYEACTVSFFN 566 (602)
T ss_dssp CSSCEEEECCCSSCCSEEEEEEETTTTEEEEEE
T ss_pred ccCCcccccccCCCCCEEEEEEecCCCEEEEEe
Confidence 111 111235799999999999999994
No 12
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=7.4e-07 Score=68.64 Aligned_cols=104 Identities=20% Similarity=0.235 Sum_probs=69.1
Q ss_pred EEeCcceeccEEEEEEEEec-----CCcEEEEEecCCCc-CCCCCCCCCCCCCCceEEeCCCceEEeCCCCCCCCCCC--
Q psy18079 63 VRCTFEVTSGVWYYETKIRS-----AGVMQIGWATKKSK-FLNHEGYGIGDDEYSVAYDGCRQLIWHDAKSEDPPNEG-- 134 (178)
Q Consensus 63 vrat~~v~~G~~YfEV~v~~-----~~~~~VG~a~~~~~-l~~~~~~~vG~d~~S~g~~g~~~~~~~~~~~~~~~yg~-- 134 (178)
|-+..++..|- .|+|+|.. .|+++||+.+.+-. +. .|.....-...+|.+.+. .+.++++..+-.|+.
T Consensus 40 vFS~rPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~-lP~~~~~L~~~~Wv~~~~--~v~~ng~~~~e~~~~~l 115 (170)
T 2e63_A 40 VLSREPLRDGR-VFTVRIDRKVNSWSGSIEIGVTALDPSVLD-FPSSATGLKGGSWVVSGC--SVLRDGRSVLEEYGQDL 115 (170)
T ss_dssp EEEEEEECTTC-EEEEEEEEECCSSCCCCEEEEESSCTTSCC-CCSSGGGCCSSEEEESSS--EEEESSCEEEESCSSCG
T ss_pred EEECCCCCCCC-EEEEEEEeecCCcceeEEEEEEccChhhcc-CCCChhhCCCCeEEEecc--ccccCCcccchhccccc
Confidence 44556666553 25666553 68999999876322 21 232222234578998774 244444322115665
Q ss_pred -CCCCCCEEEEEEeCCCCEEEEEECCEEeecccccCCC
Q psy18079 135 -MWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNV 171 (178)
Q Consensus 135 -~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~Af~~~~~ 171 (178)
...+||+||+.++ .+|+|.|++||+..|+++++++.
T Consensus 116 ~~l~~Gd~ig~~~~-~~G~l~~~iNg~~~g~~~~~ip~ 152 (170)
T 2e63_A 116 DQLGEGDRVGVERT-VAGELRLWVNGRDCGVAATGLPP 152 (170)
T ss_dssp GGCCSSCCEEEEEC-TTSCEEEEESSCEEEEEECCCCS
T ss_pred cccCCCCEEEEEEc-CCcEEEEEECCccceeeEcCCCC
Confidence 6679999999998 45999999999999999998764
No 13
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=97.22 E-value=0.00067 Score=51.90 Aligned_cols=95 Identities=13% Similarity=0.091 Sum_probs=59.5
Q ss_pred eEEEeCcceeccEEEEEEEEec-----CCcEEEEEecCCCc-CCC-CCCCC---CCCCCCceEEeCCCceEEeCCCCCCC
Q psy18079 61 ESVRCTFEVTSGVWYYETKIRS-----AGVMQIGWATKKSK-FLN-HEGYG---IGDDEYSVAYDGCRQLIWHDAKSEDP 130 (178)
Q Consensus 61 ~~vrat~~v~~G~~YfEV~v~~-----~~~~~VG~a~~~~~-l~~-~~~~~---vG~d~~S~g~~g~~~~~~~~~~~~~~ 130 (178)
.-|-++.++..|. -|+|+|.. .|.++||+.+.+=. +.. .|... +-.....|... ..+
T Consensus 37 givFS~RPl~~~E-~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~lP~~a~~dL~~~~~~W~~~----------l~~-- 103 (168)
T 2yue_A 37 AITFSARPVRINE-RICVKFAEISNNWNGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKA----------LHE-- 103 (168)
T ss_dssp CEEEESSCCCSSC-CEEEEEEECCSSSSSCCEEEEESSCGGGTTTCCCSSSSSHHHHSTTBCCEE----------CCS--
T ss_pred eEEEECCCCcCCC-EEEEEEEeecCCcceeEEEeeeecCHHHcCCCCCCcCchHHhcCCCEEEEE----------ecc--
Confidence 3456677776553 25666653 68999999875322 210 01000 11222445321 111
Q ss_pred CCCCCCCCCCEEEEEEeCCCCEEEEEECCEEeecccccCCCC
Q psy18079 131 PNEGMWHPGDILGCLLDVEARESVFYLNGRVVAVTSHLFNVN 172 (178)
Q Consensus 131 ~yg~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~Af~~~~~~ 172 (178)
.|. ..||+|++.++ .+|+|.|.+||+..|+++++++..
T Consensus 104 ~~~---~~g~~l~f~v~-~~G~l~~~iNg~~~g~~~~~V~~~ 141 (168)
T 2yue_A 104 QYC---EKDNILYYYVN-GAGDVIYGINNEEKGVILTGIDTR 141 (168)
T ss_dssp TTC---CSSCEEEEEEC-TTSEEEEEESSCEEEEEEECCCCS
T ss_pred ccc---cCCCEEEEEEc-CCCEEEEEECCCccEEEEcCCCCC
Confidence 232 56999999998 679999999999999999988754
No 14
>1wi5_A RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=40.60 E-value=29 Score=23.82 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=28.5
Q ss_pred CCCCCCCCEEEEEE-eC--CCCEEEEEECCEEeeccc
Q psy18079 133 EGMWHPGDILGCLL-DV--EARESVFYLNGRVVAVTS 166 (178)
Q Consensus 133 g~~~~~GDVIGc~l-Dl--~~g~i~F~~NG~~lG~Af 166 (178)
...++.||.|-|-+ +. +.+.|.+++....+|.|.
T Consensus 65 ~~~~~~Gd~V~vkV~~vd~~~~~i~Lslk~~~l~~~~ 101 (119)
T 1wi5_A 65 GAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAI 101 (119)
T ss_dssp SCCCCTTCEEEEEEEECCTTSCEEEEECCCCCSCCCC
T ss_pred cCEeCCCCEEEEEEEEEeCCCCEEEEEEchhhcccce
Confidence 46799999999854 44 468999999999999887
No 15
>3tur_A Mycobacteria tuberculosis LD-transpeptidase type; protein-peptidoglycan complex, peptidoglycan binding protein; HET: 0JC DGL 6CL; 1.72A {Mycobacterium tuberculosis} PDB: 3u1p_A 3u1q_A 3vae_A 3tx4_A 4huc_A
Probab=37.98 E-value=24 Score=28.61 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=27.5
Q ss_pred CCCCCCCEEEEEEeCCCCEEEEEECCEEeec
Q psy18079 134 GMWHPGDILGCLLDVEARESVFYLNGRVVAV 164 (178)
Q Consensus 134 ~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~ 164 (178)
..|+.|+..-+.+|+.+.+|.++.||+.+..
T Consensus 124 ~~f~iG~~~~I~Vdls~q~l~vy~~Gk~v~t 154 (287)
T 3tur_A 124 THFTIGDEVIATADDNTKILTVRVNGEVVKS 154 (287)
T ss_dssp EEEEECCCEEEEEETTTTEEEEEETTEEEEE
T ss_pred cccccCCeEEEEEEcCCCEEEEEECCEEEEE
Confidence 4677899999999999999999999998764
No 16
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=36.48 E-value=43 Score=22.53 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=27.4
Q ss_pred CCCCCCCCCCEEEEEEeCC--CC---EEEEEECCEEeecc
Q psy18079 131 PNEGMWHPGDILGCLLDVE--AR---ESVFYLNGRVVAVT 165 (178)
Q Consensus 131 ~yg~~~~~GDVIGc~lDl~--~g---~i~F~~NG~~lG~A 165 (178)
.-|..+..|+.|-+..+.. .| ++.|++||..+|..
T Consensus 8 ~~ga~v~~g~~v~i~a~A~D~dg~V~kVef~vdg~~vg~d 47 (98)
T 3pe9_A 8 KSNVVAYGNEFLKITATASDSDGKISRVDFLVDGEVIGSD 47 (98)
T ss_dssp CTTCCEETTSEEEEEEEECCSSSCEEEEEEEETTEEEEEE
T ss_pred CCcCEEcCCCEEEEEEEEEeCCCCEEEEEEEECCEEeccc
Confidence 4567888888877777753 34 89999999999974
No 17
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=34.88 E-value=67 Score=24.31 Aligned_cols=30 Identities=10% Similarity=-0.025 Sum_probs=24.7
Q ss_pred CCCCCCCEEEEEEeCCCCEEEEEECCEEeec
Q psy18079 134 GMWHPGDILGCLLDVEARESVFYLNGRVVAV 164 (178)
Q Consensus 134 ~~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~ 164 (178)
..+.+||+|-...+- .+.+.+++||+.+|+
T Consensus 138 ~~~~kGd~i~~~~~p-~~~l~~~~~g~~~g~ 167 (205)
T 4doo_A 138 YKIPRNSTIDLTKDP-GHVLSVAIEGNHVGS 167 (205)
T ss_dssp CCCCTTCEEEEEEET-TTEEEEEETTEEEEE
T ss_pred CCCCCCCEEEEEEcC-CCcEEEEECCeeeEE
Confidence 357899999877764 478899999999985
No 18
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=28.03 E-value=37 Score=26.12 Aligned_cols=32 Identities=9% Similarity=0.162 Sum_probs=25.2
Q ss_pred CCCCCCCCEEEEEEeCCCC--EEEEEECCEEeec
Q psy18079 133 EGMWHPGDILGCLLDVEAR--ESVFYLNGRVVAV 164 (178)
Q Consensus 133 g~~~~~GDVIGc~lDl~~g--~i~F~~NG~~lG~ 164 (178)
...+.+||+|-....-+.| +|+|++||+..|.
T Consensus 135 ~~~~~~G~~I~~~~~p~~G~L~i~~s~~G~~~~~ 168 (208)
T 4dok_A 135 SKYFKANSVITYHFSAKDGICEIGFETEGKEEEK 168 (208)
T ss_dssp TCEECTTCEEEEEECSSSCCEEEEEECTTSCCEE
T ss_pred cCCCCCCCEEEEEEeCCCCeEEEEEEeCCEeccc
Confidence 3578999999887776767 4889999986653
No 19
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=25.32 E-value=1.5e+02 Score=19.72 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=23.4
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEECCEEeecc
Q psy18079 135 MWHPGDILGCLLDVEARESVFYLNGRVVAVT 165 (178)
Q Consensus 135 ~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~A 165 (178)
.+++||||=+--.. ...+..++||+.++.+
T Consensus 39 ~L~~GdVI~Ld~~~-~~~v~i~vng~~i~~G 68 (96)
T 3uep_A 39 SLEPGSLIDLTTPV-DGEVRLLANGRLLGHG 68 (96)
T ss_dssp HCCTTCEEEEEEES-SCEEEEEETTEEEEEE
T ss_pred cCCCCCEEEeCCCC-CCcEEEEECCEEEEEE
Confidence 68899999776655 4688889999987753
No 20
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=23.83 E-value=1.3e+02 Score=19.88 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=23.3
Q ss_pred CCCCCCEEEEEEeCCCCEEEEEECCEEeecc
Q psy18079 135 MWHPGDILGCLLDVEARESVFYLNGRVVAVT 165 (178)
Q Consensus 135 ~~~~GDVIGc~lDl~~g~i~F~~NG~~lG~A 165 (178)
.+++||||=+--..+ ..+..++||+.+..+
T Consensus 39 ~L~~GdVI~Ld~~~~-~~v~v~v~g~~i~~G 68 (96)
T 1o6a_A 39 EMIHGSIIELDKLTG-EPVDILVNGKLIARG 68 (96)
T ss_dssp HCCTTCEEEEEEETT-CCEEEEETTEEEEEE
T ss_pred CCCCCCEEEeCCCCC-CcEEEEECCEEEEEE
Confidence 688999997766555 567788999988764
No 21
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=20.80 E-value=1.5e+02 Score=18.47 Aligned_cols=25 Identities=24% Similarity=0.090 Sum_probs=19.6
Q ss_pred CCCCCCCEEEEEE---eCCCCEEEEEEC
Q psy18079 134 GMWHPGDILGCLL---DVEARESVFYLN 158 (178)
Q Consensus 134 ~~~~~GDVIGc~l---Dl~~g~i~F~~N 158 (178)
..++.||.|-|-+ |.+++.|.+++-
T Consensus 44 ~~~~~Gd~V~v~V~~vd~~~~~i~lsl~ 71 (80)
T 2k52_A 44 ENLNVGDEIIVQAIDVRPEKREIDFKYI 71 (80)
T ss_dssp GGCCTTCEEEEEEEEEETTTTEEEEEEC
T ss_pred eeeCCCCEEEEEEEEEECCCCEEEEEEe
Confidence 4689999998854 667799999863
No 22
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=20.71 E-value=64 Score=25.29 Aligned_cols=24 Identities=17% Similarity=0.079 Sum_probs=18.5
Q ss_pred CCEEEEEEeCCCCEEEEEECCEEe
Q psy18079 139 GDILGCLLDVEARESVFYLNGRVV 162 (178)
Q Consensus 139 GDVIGc~lDl~~g~i~F~~NG~~l 162 (178)
...--|-|-.++++|.|++||+.|
T Consensus 158 n~~Y~i~i~kd~~~v~f~vNg~~l 181 (223)
T 1oq1_A 158 DSPYRMKLIKDKGYVHFSINGLPI 181 (223)
T ss_dssp CSCEEEEEEEETTEEEEEETTEEE
T ss_pred CCcEEEEEEEeCCEEEEEECCEEE
Confidence 344455666669999999999987
Done!