Query psy18082
Match_columns 280
No_of_seqs 201 out of 1381
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 22:09:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18082.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18082hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vjv_A Ubiquitin carboxyl-term 100.0 9.3E-31 3.2E-35 246.8 15.5 183 3-199 210-413 (415)
2 1nb8_A Ubiquitin carboxyl-term 100.0 9.7E-31 3.3E-35 242.2 12.0 126 4-199 180-314 (353)
3 2ayn_A Ubiquitin carboxyl-term 100.0 6.2E-31 2.1E-35 246.6 10.1 175 3-200 218-394 (404)
4 2y6e_A Ubiquitin carboxyl-term 100.0 1.9E-29 6.5E-34 234.1 13.3 118 4-200 241-359 (367)
5 2f1z_A Ubiquitin carboxyl-term 100.0 2.6E-29 9E-34 243.9 14.3 127 3-199 348-483 (522)
6 2gfo_A Ubiquitin carboxyl-term 100.0 3.6E-28 1.2E-32 228.3 12.6 116 4-198 278-394 (396)
7 3nhe_A Ubiquitin carboxyl-term 100.0 3.1E-28 1.1E-32 222.9 11.6 117 3-199 225-342 (348)
8 3i3t_A Ubiquitin carboxyl-term 99.9 6.4E-28 2.2E-32 221.4 10.1 115 3-199 235-350 (355)
9 3mhs_A Ubiquitin carboxyl-term 99.9 1.9E-27 6.4E-32 228.0 12.7 127 3-199 347-473 (476)
10 3ihp_A Ubiquitin carboxyl-term 99.9 6.2E-26 2.1E-30 231.1 11.4 55 3-58 572-626 (854)
11 2vhf_A Ubiquitin carboxyl-term 99.6 2.9E-16 1E-20 144.0 8.0 139 10-170 161-309 (374)
12 3mp2_A Non-structural protein 55.3 13 0.00046 31.1 4.5 34 140-177 163-196 (211)
13 1qmy_A Protease, leader protea 43.9 23 0.0008 27.8 3.9 30 147-178 116-145 (167)
14 2fe8_A PP1AB, ORF1AB, replicas 42.6 25 0.00085 31.3 4.4 34 141-177 263-296 (315)
15 3o65_A Putative ataxin-3-like 24.5 66 0.0022 26.4 3.8 31 136-172 109-139 (191)
16 2ww6_A Fibritin, T4 fibritin; 22.6 41 0.0014 18.4 1.4 14 154-169 12-25 (27)
17 4ekf_A Adenain; alpha and beta 21.9 81 0.0028 25.9 3.7 32 138-169 40-72 (204)
No 1
>1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9
Probab=99.97 E-value=9.3e-31 Score=246.77 Aligned_cols=183 Identities=20% Similarity=0.271 Sum_probs=115.1
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcccc-----cccccccc----ccccc
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQYTF-----RLDYGVRK----GAESN 73 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~-----~~~~~~~~----~~~~~ 73 (280)
...++|+..|.+||+||+||||||.|+..++...|++..|.||..|||.+||...... +.+..... .....
T Consensus 210 ~~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~~~~~~r~~~~~~~~~~~e~~~~ 289 (415)
T 1vjv_A 210 NSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVADMLTPEYAAEKVKVRDELRKVEKEKNEKERE 289 (415)
T ss_dssp CCCEEEEEEEEECBSEEEEEECCEEEETTTTEEEECCCCCBCCSEEECGGGBCHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred cccEEEEEEcccCCCeeEEEEEEEEEeCCCCcchhhcCccCCCcEeEhHHhcChhhhhhhhhhHHHHHHHhhhhhhhhhh
Confidence 4568999999999999999999999998888999999999999999999998875321 11110000 00000
Q ss_pred ccCCCCcchhhccccCCCCCCCCccCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEe
Q psy18082 74 QASTNQDEEHCEENQLDPSVSNPVITP---------YNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHS 144 (280)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~ 144 (280)
.+.....+. +......+.... ............ . + ............|+|+|||+|.
T Consensus 290 ~k~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--~-~-----~~~~~~~~~~~~Y~L~aVv~H~ 355 (415)
T 1vjv_A 290 IKRRKFDPS------SSENVMTPREQYETQVALNESEKDQWLEEYKKH--F-P-----PNLEKGENPSCVYNLIGVITHQ 355 (415)
T ss_dssp -------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHTT--S-C-----TTCCTTBCSSSEEEEEEEEEEE
T ss_pred hhhcccccc------ccccccccchhhhhchhhHHhhhhhhhhhcccc--c-c-----cccccccCCCceEEEEEEEEec
Confidence 000000000 000000000000 000000000000 0 0 0000012346799999999999
Q ss_pred e-cCCCceEEEEEEc-CCCCCeEEecCceeEEeChhhhhhhcCCCC-CeEEEEEeecc
Q psy18082 145 G-SASGGHYYAYIKN-FSTDEWYCFNDQSVTRITDEDIHKSYGGGP-ARGYYSGFEDK 199 (280)
Q Consensus 145 G-s~~sGHY~~yir~-~~~~~W~~fnD~~V~~v~~~~V~~~~gg~~-~~aY~L~~~~~ 199 (280)
| ++++|||+||+|+ ..+++||+|||+.|+++++++|+...||+. .+||||+|.++
T Consensus 356 G~s~~~GHY~a~vr~~~~~~~W~~fnD~~V~~v~~~~v~~~~~g~~~~~aYiLfY~r~ 413 (415)
T 1vjv_A 356 GANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKGF 413 (415)
T ss_dssp SSSTTSSEEEEEEECSSCTTCEEEEETTEEEEECHHHHHGGGCCTTSCEEEEEEEEET
T ss_pred CCCCCCCCEEEEEeCCCCCCcEEEeECCcCeEcCHHHHhhhcCCCCcceEEEEEEEec
Confidence 9 8999999999998 568999999999999999999988655544 89999966554
No 2
>1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A
Probab=99.97 E-value=9.7e-31 Score=242.17 Aligned_cols=126 Identities=23% Similarity=0.342 Sum_probs=101.5
Q ss_pred eEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcccccccccccccccccccCCCCcchh
Q psy18082 4 IVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEEH 83 (280)
Q Consensus 4 ~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
..++|++.|.+||+||+||||||.|+..++...|+++.|.||..|||.+||...
T Consensus 180 ~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~K~~~~v~fp~~Ldl~~~~~~~-------------------------- 233 (353)
T 1nb8_A 180 QEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKT-------------------------- 233 (353)
T ss_dssp ECEEEEEEESCCCSEEEEEECCCC--------CCCCCCCBCCSEEECGGGBSSC--------------------------
T ss_pred EeeEEEEEhhcCCCceEEEEecEEEecccCceEecCcEEECCCeeehhhhhccc--------------------------
Confidence 457999999999999999999999998778889999999999999999995321
Q ss_pred hccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCCCC
Q psy18082 84 CEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFSTDE 163 (280)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~~~ 163 (280)
....+..|+|+|||+|.|++.+|||+||+|+..+++
T Consensus 234 --------------------------------------------~~~~~~~Y~L~avv~H~G~~~~GHY~a~v~~~~~~~ 269 (353)
T 1nb8_A 234 --------------------------------------------DPKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGK 269 (353)
T ss_dssp --------------------------------------------CTTSCCEEEEEEEEEEESSTTCCCEEEEECTTSSSC
T ss_pred --------------------------------------------CCCCCceEEEEEEEEEeCCCCCcEEEEEEecCCCCC
Confidence 011246899999999999889999999999867899
Q ss_pred eEEecCceeEEeChhhhhh-hcCCC--------CCeEEEEEeecc
Q psy18082 164 WYCFNDQSVTRITDEDIHK-SYGGG--------PARGYYSGFEDK 199 (280)
Q Consensus 164 W~~fnD~~V~~v~~~~V~~-~~gg~--------~~~aY~L~~~~~ 199 (280)
||+|||+.|+++++++|+. .+||. ...||+|+|.++
T Consensus 270 W~~fnD~~V~~v~~~~v~~~~~gg~~~~~~~~~~~~aYiLfY~r~ 314 (353)
T 1nb8_A 270 WCKFDDDVVSRCTKEEAIEHNYGGHDDDLSVRHCTNAYMLVYIRE 314 (353)
T ss_dssp CEEEETTEEEECCHHHHTGGGSCCC-------CCEEEEEEEEEET
T ss_pred EEEEECcceEECCHHHHHHHhcCCCccccccCcCCeEEEEEEEEC
Confidence 9999999999999999875 67774 268999965554
No 3
>2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A
Probab=99.97 E-value=6.2e-31 Score=246.57 Aligned_cols=175 Identities=19% Similarity=0.251 Sum_probs=114.1
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcccccccccccccccccccCCCCcch
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEE 82 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
...++|++.|.+||+||+||||||.|+..++...|++..|.||..|||.+||.......... .+.. .........+
T Consensus 218 ~~~~~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~v~fP~~Ldl~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~ 293 (404)
T 2ayn_A 218 NALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVS-FRSK---FKDLEDKKVN 293 (404)
T ss_dssp ECCEEEEEEEEECCSSEEEEEECBCCCCSSSSCCBCCCCCBCCSEEECGGGBCHHHHHHTTT-TTGG---GTCTTC----
T ss_pred ccceeeeeeHhhCCCceEEEEEEEEEecccCceeccCceeccCceeEHhHhcChhhhhhcch-hhhH---Hhhhhcccch
Confidence 35689999999999999999999999987788999999999999999999987643111000 0000 0000000000
Q ss_pred hhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEee-cCCCceEEEEEEcCCC
Q psy18082 83 HCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSG-SASGGHYYAYIKNFST 161 (280)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~G-s~~sGHY~~yir~~~~ 161 (280)
.........+. .+.+...+ +... ...........|+|+|||+|.| ++++|||+||+|+ .+
T Consensus 294 ~~~~~~~~~~~---------~~~~~~~e-----~~~~----~~~~~~~~~~~Y~L~avv~H~G~s~~~GHY~a~v~~-~~ 354 (404)
T 2ayn_A 294 QQPNTSDKKSS---------PQKEVKYE-----PFSF----ADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKR-KQ 354 (404)
T ss_dssp ---------------------------C-----CCCC----SCTTTTCCCSEEEEEEEEEEESSSTTSSEEEEEEEE-ET
T ss_pred hhhhhcccccc---------cccccccc-----cccc----ccccCcCCCceEEEEEEEEecCCCCCCCCeEEEEEC-CC
Confidence 00000000000 00000000 0000 0011234568999999999999 7999999999998 58
Q ss_pred CCeEEecCceeEEeChhhhhhhcCCCC-CeEEEEEeeccc
Q psy18082 162 DEWYCFNDQSVTRITDEDIHKSYGGGP-ARGYYSGFEDKV 200 (280)
Q Consensus 162 ~~W~~fnD~~V~~v~~~~V~~~~gg~~-~~aY~L~~~~~~ 200 (280)
++||+|||+.|+++++++|+...||+. .+||||+|.++-
T Consensus 355 ~~W~~fnD~~V~~v~~~~v~~~~~g~~~~~aYiLfY~r~~ 394 (404)
T 2ayn_A 355 DEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRR 394 (404)
T ss_dssp TEEEEEBTTBCCCBCHHHHGGGGSSSSSCEEEEEEEECC-
T ss_pred CeEEEeecccceecCHHHHHhhhCCCCCceEEEEEEEecC
Confidence 899999999999999999988655444 899999666553
No 4
>2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=234.06 Aligned_cols=118 Identities=20% Similarity=0.275 Sum_probs=102.0
Q ss_pred eEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccc-eecCCCCCCCcccccccccccccccccccCCCCcch
Q psy18082 4 IVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTS-VETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEE 82 (280)
Q Consensus 4 ~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~-~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
..++|++.|++||+||+||||||.|+. +...|++..|.||. .|||.+|+...
T Consensus 241 ~~a~K~~~i~~lP~vL~i~LkRF~~~~--~~~~K~~~~v~fp~~~Ldl~~~~~~~------------------------- 293 (367)
T 2y6e_A 241 QQATKKFDLWSLPKILVVHLKRFSYNR--YWRDKLDTVVEFPIRGLNMSEFVCNL------------------------- 293 (367)
T ss_dssp ECCEEEEEEEECCSEEEEEEECEEECS--SCEEECCCCEECCSSCEECGGGBSCS-------------------------
T ss_pred ceEEEEEEEecCCcEEEEEEeCeeecC--ccceecCceEEecCCcCChhhhccCC-------------------------
Confidence 457899999999999999999999975 56789999999997 69999995331
Q ss_pred hhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCCC
Q psy18082 83 HCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFSTD 162 (280)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~~ 162 (280)
......|+|+|||+|.|++++|||+||+|+..++
T Consensus 294 ----------------------------------------------~~~~~~Y~L~avv~H~G~~~~GHY~a~~~~~~~~ 327 (367)
T 2y6e_A 294 ----------------------------------------------SARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNG 327 (367)
T ss_dssp ----------------------------------------------SSCCCEEEEEEEEEEECSSSSCEEEEEEECTTTC
T ss_pred ----------------------------------------------CCCCceEEEEEEeecCCCCCCCeeeEEEEcCCCC
Confidence 1124689999999999999999999999997689
Q ss_pred CeEEecCceeEEeChhhhhhhcCCCCCeEEEEEeeccc
Q psy18082 163 EWYCFNDQSVTRITDEDIHKSYGGGPARGYYSGFEDKV 200 (280)
Q Consensus 163 ~W~~fnD~~V~~v~~~~V~~~~gg~~~~aY~L~~~~~~ 200 (280)
+||+|||+.|+++++++|.. ..||+|||.++-
T Consensus 328 ~W~~fnD~~V~~v~~~~v~~------~~aYiLfY~r~~ 359 (367)
T 2y6e_A 328 KWYYFDDSNVSLASEDQIVT------KAAYVLFYQRRD 359 (367)
T ss_dssp CEEEEETTEEEECCGGGTSS------TTEEEEEEEECC
T ss_pred eEEEECCCCceECCHHHcCC------CCcEEEEEEEcC
Confidence 99999999999999999864 479999766654
No 5
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=243.86 Aligned_cols=127 Identities=23% Similarity=0.334 Sum_probs=109.0
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcccccccccccccccccccCCCCcch
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEE 82 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
...++|++.|.+||+||+||||||.|+..++...|+++.|.||..|||.+||...
T Consensus 348 ~~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~v~fp~~Ldl~~~~~~~------------------------- 402 (522)
T 2f1z_A 348 LQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKT------------------------- 402 (522)
T ss_dssp SBCEEEEEEESCCCSEEEEEECCEEECSSSSCEEECCCCCBCCSEEECGGGBSSC-------------------------
T ss_pred ccceEEEEEeecCCceEEEEEEeEEEcccCCcceEcCcEEeCCCeecchhhhccc-------------------------
Confidence 3567999999999999999999999998878899999999999999999995321
Q ss_pred hhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCCC
Q psy18082 83 HCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFSTD 162 (280)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~~ 162 (280)
....+..|+|+|||+|.|++.+|||+||+|+..++
T Consensus 403 ---------------------------------------------~~~~~~~Y~L~avv~H~G~~~~GHY~a~v~~~~~~ 437 (522)
T 2f1z_A 403 ---------------------------------------------DPKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDG 437 (522)
T ss_dssp ---------------------------------------------CTTSCCEEEEEEEEEEECSSSCSEEEEEECTTSSS
T ss_pred ---------------------------------------------cCCCCcEEEEEEEEEecccCCCceEEEEEecCCCC
Confidence 01124689999999999988999999999986789
Q ss_pred CeEEecCceeEEeChhhhhh-hcCCC--------CCeEEEEEeecc
Q psy18082 163 EWYCFNDQSVTRITDEDIHK-SYGGG--------PARGYYSGFEDK 199 (280)
Q Consensus 163 ~W~~fnD~~V~~v~~~~V~~-~~gg~--------~~~aY~L~~~~~ 199 (280)
+||+|||+.|+++++++|+. .+||. ...||||+|.++
T Consensus 438 ~W~~fnD~~V~~v~~~~v~~~~~Gg~~~~~~~~~~~~aYiLfY~r~ 483 (522)
T 2f1z_A 438 KWCKFDDDVVSRCTKEEAIEHNYGGHDDDLSVRHCTNAYMLVYIRE 483 (522)
T ss_dssp CCEEEETTEEEECCHHHHSTTSSCCC--------CEEEEEEEEEET
T ss_pred CEEEEECceeEECCHHHHHHhhcCCCccccccCcCCceEEEEEEEC
Confidence 99999999999999999875 67774 268999965554
No 6
>2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A
Probab=99.95 E-value=3.6e-28 Score=228.33 Aligned_cols=116 Identities=21% Similarity=0.269 Sum_probs=99.5
Q ss_pred eEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccc-eecCCCCCCCcccccccccccccccccccCCCCcch
Q psy18082 4 IVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTS-VETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEE 82 (280)
Q Consensus 4 ~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~-~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
..++|++.|++||+||+||||||.|+. ....|++..|.||. .|||.+|+...
T Consensus 278 ~~a~k~~~i~~lP~vLiihLkRF~~~~--~~~~K~~~~v~fp~~~Ldl~~~~~~~------------------------- 330 (396)
T 2gfo_A 278 RDSLKKIEIWKLPPVLLVHLKRFSYDG--RWKQKLQTSVDFPLENLDLSQYVIGP------------------------- 330 (396)
T ss_dssp ECEEEEEEEEECCSEEEEEECCEEECS--SSEEECCCEEECCSSCBCCGGGBCSC-------------------------
T ss_pred cceEEEEEEecCCcEEEEEecceeccC--ccceecCceEecchhhccccccccCC-------------------------
Confidence 467899999999999999999999975 35689999999996 69999994321
Q ss_pred hhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCCC
Q psy18082 83 HCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFSTD 162 (280)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~~ 162 (280)
......|+|+|||+|.|++++|||+||+|+..++
T Consensus 331 ----------------------------------------------~~~~~~Y~L~avv~H~G~~~~GHY~a~v~~~~~~ 364 (396)
T 2gfo_A 331 ----------------------------------------------KNNLKKYNLFSVSNHYGGLDGGHYTAYCKNAARQ 364 (396)
T ss_dssp ----------------------------------------------CSSCCCBEEEEEEEEESCTTTCEEEEEEEETTTT
T ss_pred ----------------------------------------------CCCCceEEEEEEEEecCCCCCCceEEEEcCCCCC
Confidence 1123589999999999999999999999996679
Q ss_pred CeEEecCceeEEeChhhhhhhcCCCCCeEEEEEeec
Q psy18082 163 EWYCFNDQSVTRITDEDIHKSYGGGPARGYYSGFED 198 (280)
Q Consensus 163 ~W~~fnD~~V~~v~~~~V~~~~gg~~~~aY~L~~~~ 198 (280)
+||+|||+.|++|++++|.. ..||+|||.+
T Consensus 365 ~W~~fnD~~V~~v~~~~v~~------~~aYiLfY~r 394 (396)
T 2gfo_A 365 RWFKFDDHEVSDISVSSVKS------SAAYILFYTS 394 (396)
T ss_dssp EEEEEETTEEEECCHHHHSC------TTEEEEEEEC
T ss_pred CEEEEeCCCeEECCHHHcCC------CCceEEEEEE
Confidence 99999999999999999964 4799996554
No 7
>3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A
Probab=99.95 E-value=3.1e-28 Score=222.92 Aligned_cols=117 Identities=22% Similarity=0.299 Sum_probs=100.7
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccc-eecCCCCCCCcccccccccccccccccccCCCCcc
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTS-VETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDE 81 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~-~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
...++|+..|.+||++|+||||||.|+ ++...|++..|.||. .|||.+|+..
T Consensus 225 ~~~~~k~~~i~~lP~vL~i~lkRf~~~--~~~~~K~~~~v~fp~~~ldl~~~~~~------------------------- 277 (348)
T 3nhe_A 225 RKRCIKKFSIQRFPKILVLHLKRFSES--RIRTSKLTTFVNFPLRDLDLREFASE------------------------- 277 (348)
T ss_dssp ECCEEEEEEEEECCSEEEEEECCBCCC--SSCCCBCCCCEECCSSCEECGGGBCT-------------------------
T ss_pred cccEEEEEEeecCCceEEEEEEccccc--CCceeecCcceeccCCcCCHhhhcCC-------------------------
Confidence 356899999999999999999999665 467899999999995 7999999432
Q ss_pred hhhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCC
Q psy18082 82 EHCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFST 161 (280)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~ 161 (280)
......|+|+|||+|.|++.+|||+||+|++.+
T Consensus 278 -----------------------------------------------~~~~~~Y~L~avv~H~G~~~~GHY~~~~~~~~~ 310 (348)
T 3nhe_A 278 -----------------------------------------------NTNHAVYNLYAVSNHSGTTMGGHYTAYCRSPGT 310 (348)
T ss_dssp -----------------------------------------------TCCCCEEEEEEEEEEEECSSCEEEEEEEECTTT
T ss_pred -----------------------------------------------CCCCCcEEEEEEEEccCCCCCcccEEEEccCCC
Confidence 112458999999999999999999999999778
Q ss_pred CCeEEecCceeEEeChhhhhhhcCCCCCeEEEEEeecc
Q psy18082 162 DEWYCFNDQSVTRITDEDIHKSYGGGPARGYYSGFEDK 199 (280)
Q Consensus 162 ~~W~~fnD~~V~~v~~~~V~~~~gg~~~~aY~L~~~~~ 199 (280)
++||+|||+.|+++++++|.. ..||+|||.++
T Consensus 311 ~~W~~~nD~~V~~v~~~~v~~------~~aY~LfY~r~ 342 (348)
T 3nhe_A 311 GEWHTFNDSSVTPMSSSQVRT------SDAYLLFYELA 342 (348)
T ss_dssp CCEEEEETTEEEEECGGGTCC------TTEEEEEEEEC
T ss_pred CcEEEEeCCCceECCHHHcCC------CCceEEEEEec
Confidence 999999999999999999954 47999965554
No 8
>3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A
Probab=99.95 E-value=6.4e-28 Score=221.41 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=97.9
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccc-eecCCCCCCCcccccccccccccccccccCCCCcc
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTS-VETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDE 81 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~-~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
...++|++.|.+||+||+||||||.|+. +...|++..|.||. .|||.+|+..
T Consensus 235 ~~~a~k~~~i~~lP~vL~i~lkRF~~~~--~~~~K~~~~v~fp~~~l~l~~~~~~------------------------- 287 (355)
T 3i3t_A 235 KTRSTKKLTVQRFPRILVLHLNRFSASR--GSIKKSSVGVDFPLQRLSLGDFASD------------------------- 287 (355)
T ss_dssp CCCEEEEEEEEECCSEEEEEECCEECCS--SCCEECCCCCBCCSSCEECGGGBC--------------------------
T ss_pred ccceEEEEEcccCChheEEEhhheecCC--CCceECCcceeCCccccCchhhccC-------------------------
Confidence 4678999999999999999999997764 67889999999995 5999998432
Q ss_pred hhhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCC
Q psy18082 82 EHCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFST 161 (280)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~ 161 (280)
......|+|+|||+|.|++++|||+||+|. .
T Consensus 288 -----------------------------------------------~~~~~~Y~L~avv~H~G~~~~GHY~~~~~~--~ 318 (355)
T 3i3t_A 288 -----------------------------------------------KAGSPVYQLYALCNHSGSVHYGHYTALCRC--Q 318 (355)
T ss_dssp --------------------------------------------------CCEEEEEEEEEEEEETTEEEEEEEEEE--T
T ss_pred -----------------------------------------------CCCCcceEEEEEEEecCCCCCCeEEEEEEc--C
Confidence 112458999999999999999999999998 6
Q ss_pred CCeEEecCceeEEeChhhhhhhcCCCCCeEEEEEeecc
Q psy18082 162 DEWYCFNDQSVTRITDEDIHKSYGGGPARGYYSGFEDK 199 (280)
Q Consensus 162 ~~W~~fnD~~V~~v~~~~V~~~~gg~~~~aY~L~~~~~ 199 (280)
+.||+|||+.|+++++++|.. ..||+|||.+.
T Consensus 319 ~~W~~~nD~~V~~v~~~~v~~------~~aYiLfY~r~ 350 (355)
T 3i3t_A 319 TGWHVYNDSRVSPVSENQVAS------SEGYVLFYQLM 350 (355)
T ss_dssp TEEEEEETTEEEEECHHHHHT------SCCSEEEEEEC
T ss_pred CeEEEEcCCCcEECCHHHcCC------CCcEEEEEEec
Confidence 679999999999999999975 36999955543
No 9
>3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A
Probab=99.94 E-value=1.9e-27 Score=228.02 Aligned_cols=127 Identities=20% Similarity=0.281 Sum_probs=105.0
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcccccccccccccccccccCCCCcch
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQYTFRLDYGVRKGAESNQASTNQDEE 82 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (280)
...++|+..|.+||+||+||||||.|+.. +...|++..|.||..|||.+|+.......
T Consensus 347 ~~~a~k~~~i~~lP~vL~i~LkRF~~~~~-~~~~K~~~~V~fP~~Ldl~~~~~~~~~~~--------------------- 404 (476)
T 3mhs_A 347 TQDAIKQLGIHKLPSVLVLQLKRFEHLLN-GSNRKLDDFIEFPTYLNMKNYCSTKEKDK--------------------- 404 (476)
T ss_dssp ECCCEEEEEEEEBCSEEEEEECCEEECTT-SCEEECCCCCBCCSEEECGGGBSCCBCCC---------------------
T ss_pred cccEEEEEEcccCCcceEEEeeeccccCC-CCeEECCEEEcCCCeeechhhcCcccccc---------------------
Confidence 34678999999999999999999999864 78899999999999999999965431000
Q ss_pred hhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcCCCC
Q psy18082 83 HCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNFSTD 162 (280)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~~~~ 162 (280)
.. .........|+|+|||+|.|++++|||++|+|. .++
T Consensus 405 ----------------------~~-------------------~~~~~~~~~Y~L~avv~H~G~~~~GHY~a~vr~-~~~ 442 (476)
T 3mhs_A 405 ----------------------HS-------------------ENGKVPDIIYELIGIVSHKGTVNEGHYIAFCKI-SGG 442 (476)
T ss_dssp -------------------------------------------CCCBCCCEEEEEEEEEEEEECSSSEEEEEEEEC-TTS
T ss_pred ----------------------cc-------------------cccCCCCCcEEEEEEEEeCCCCCCCceEEEEEC-CCC
Confidence 00 001234678999999999999999999999997 588
Q ss_pred CeEEecCceeEEeChhhhhhhcCCCCCeEEEEEeecc
Q psy18082 163 EWYCFNDQSVTRITDEDIHKSYGGGPARGYYSGFEDK 199 (280)
Q Consensus 163 ~W~~fnD~~V~~v~~~~V~~~~gg~~~~aY~L~~~~~ 199 (280)
+||+|||+.|+++++++|+. ..||+|||.++
T Consensus 443 ~W~~fnD~~V~~v~~~~v~~------~~aYiLfY~r~ 473 (476)
T 3mhs_A 443 QWFKFNDSMVSSISQEEVLK------EQAYLLFYTIR 473 (476)
T ss_dssp CEEEEETTEEEEECHHHHTT------SCEEEEEEEEE
T ss_pred cEEEEeCCceEECCHHHhcc------CCcEEEEEEEe
Confidence 99999999999999999976 37999976665
No 10
>3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens}
Probab=99.93 E-value=6.2e-26 Score=231.06 Aligned_cols=55 Identities=9% Similarity=-0.112 Sum_probs=50.7
Q ss_pred ceEEEEEEecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcc
Q psy18082 3 PIVYKADALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQY 58 (280)
Q Consensus 3 ~~~~~K~~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~ 58 (280)
...++|++.|.+||+||+||||||.|+.. +...|++..|.||+.|||++||....
T Consensus 572 k~~a~K~~~i~~lP~vLiihLkRF~~d~~-~~~~Ki~~~V~FP~~LDl~~y~~~~~ 626 (854)
T 3ihp_A 572 KSVAVKTTRFASFPDYLVIQIKKFTFGLD-WVPKKLDVSIEMPEELDISQLRGTGL 626 (854)
T ss_dssp EEEEEEEEEESSCCSEEEEEECCEEECGG-GCEEECCEECCCCSEEECGGGBCCCS
T ss_pred cceeeEEEEeeeCCceEEEEeehheecCC-CceEECCeEEecCCcEehHHhccCCC
Confidence 46799999999999999999999999876 88899999999999999999988755
No 11
>2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens}
Probab=99.63 E-value=2.9e-16 Score=143.96 Aligned_cols=139 Identities=12% Similarity=0.071 Sum_probs=75.6
Q ss_pred EecccCCcceEEEEEEEEEeCCcceeeccccceeccceecCCCCCCCcc---cccccccccccccccccCCCCc-c----
Q psy18082 10 ALSSKHIKLAIHQDKVVDFSGTTSENITIEDLMGVTSVETNSPSSEPQY---TFRLDYGVRKGAESNQASTNQD-E---- 81 (280)
Q Consensus 10 ~~I~~lP~vL~IhLkRF~fd~~~~~~~Ki~~~V~FP~~Ldl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~---- 81 (280)
+.|.+||++|+||+.|| +...||-.+|.||.+||+..+|++++ +++.+.+.....+..+...... +
T Consensus 161 ikisrLP~yLtVq~vRF------gKkaKIlrkV~fp~eLDvtdl~tdelr~~~vr~kl~e~e~~~~~k~~k~~~~~~~~~ 234 (374)
T 2vhf_A 161 LKFAEAPSCLIIQMPRF------GKDFKLFKKIFPSLELNITDLLEDTPRQCRICGGLAMYECRECYDDPDISAGKIKQF 234 (374)
T ss_dssp EEESSCCSEEEEECCCC------SSSSSCCCCCBCCSEECCGGGBSSSCCBCTTTSCBCCEECGGGTTCTTTTTTSCCEE
T ss_pred CeeecCCcceEEeeecc------CccccccCCCCCcchhccHhhcCcchhhccHhHHHHHHHHHHHHhhhhccccccccc
Confidence 34999999999999999 67789999999999999999999975 3333332221111111111000 0
Q ss_pred -hhhccccCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCceeEEEEEEEEEeecCCCceEEEEEEcC-
Q psy18082 82 -EHCEENQLDPSVSNPVITPYNGDVDEGIDISHPEPPSTSATKDPSMNAKGPYVYELFSIMIHSGSASGGHYYAYIKNF- 159 (280)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~L~aVi~H~Gs~~sGHY~~yir~~- 159 (280)
..+.... ...... .+. ........ .................|+|.|||+ +++|||++|||..
T Consensus 235 ~~~~~~~~-~~~~~~-----~~~-~~~~~~~~-----~~~~~~~~~~g~~psg~yeL~aVlt----adsgHYvafVK~~~ 298 (374)
T 2vhf_A 235 CKTCNTQV-HLHPKR-----LNH-KYNPVSLP-----KDLPDWDWRHGCIPCQNMELFAVLC----IETSHYVAFVKYGK 298 (374)
T ss_dssp CHHHHHHH-TTSGGG-----TTC-CCEECCC---------------------CCEEEEEEEE----EETTEEEEEEECSS
T ss_pred cchhhhhh-hhhhhh-----hcc-cccccccC-----ccccccccccCCCCceeEEEEEEEE----ccCCceEEEEEecC
Confidence 1111000 000000 000 00000000 0000000011234557999999999 8999999999973
Q ss_pred CCCCeEEecCc
Q psy18082 160 STDEWYCFNDQ 170 (280)
Q Consensus 160 ~~~~W~~fnD~ 170 (280)
.+++||+||-.
T Consensus 299 ~d~~W~~FDsm 309 (374)
T 2vhf_A 299 DDSAWLFFDSM 309 (374)
T ss_dssp STTCEEEEETT
T ss_pred CCCCeEEEech
Confidence 37999999853
No 12
>3mp2_A Non-structural protein 3; papain-like protease, TGEV, hydrolase; 2.50A {Porcine transmissible gastroenteritiscoronavirus}
Probab=55.26 E-value=13 Score=31.05 Aligned_cols=34 Identities=18% Similarity=0.471 Sum_probs=26.6
Q ss_pred EEEEeecCCCceEEEEEEcCCCCCeEEecCceeEEeCh
Q psy18082 140 IMIHSGSASGGHYYAYIKNFSTDEWYCFNDQSVTRITD 177 (280)
Q Consensus 140 Vi~H~Gs~~sGHY~~yir~~~~~~W~~fnD~~V~~v~~ 177 (280)
-++-.|+.++|||+.|... .+ +.+|-..+..+..
T Consensus 163 ~~vF~G~~~~GHY~~~~~~--~~--~~vDG~~~~~~~~ 196 (211)
T 3mp2_A 163 HAVYTGTTQNGHYMVDDIE--HG--YCVDGMGIKPLKK 196 (211)
T ss_dssp EEEEESCTTTCEEEEEETT--TT--EEEETTEEECCCC
T ss_pred EEEEEcCCCCceEEEEecc--cc--eEEeCCceeEccc
Confidence 3444899999999999755 33 8999999888863
No 13
>1qmy_A Protease, leader protease; hydrolase, sulfhydryl proteinase, picornaviral proteinase; 1.9A {Aphthovirus O} SCOP: d.3.1.2 PDB: 1qol_A 2jqf_R 2jqg_R
Probab=43.87 E-value=23 Score=27.76 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=24.7
Q ss_pred CCCceEEEEEEcCCCCCeEEecCceeEEeChh
Q psy18082 147 ASGGHYYAYIKNFSTDEWYCFNDQSVTRITDE 178 (280)
Q Consensus 147 ~~sGHY~~yir~~~~~~W~~fnD~~V~~v~~~ 178 (280)
...+|-+-++-- +..||.+||+.....+.+
T Consensus 116 kg~eHAVFa~~T--S~GWyaiDDe~fypwtPd 145 (167)
T 1qmy_A 116 KGQEHAVFACVT--SNGWYAIDDEDFYPWTPD 145 (167)
T ss_dssp ETTTEEEEEECC--TTSSEEEETTEEEECCCC
T ss_pred cCCCceEEEEEc--cCceEEecccccccCCCC
Confidence 345899988876 778999999999998653
No 14
>2fe8_A PP1AB, ORF1AB, replicase polyprotein 1AB; protease, hydrolase; 1.85A {Sars coronavirus} PDB: 3e9s_A* 3mj5_A*
Probab=42.55 E-value=25 Score=31.26 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=26.7
Q ss_pred EEEeecCCCceEEEEEEcCCCCCeEEecCceeEEeCh
Q psy18082 141 MIHSGSASGGHYYAYIKNFSTDEWYCFNDQSVTRITD 177 (280)
Q Consensus 141 i~H~Gs~~sGHY~~yir~~~~~~W~~fnD~~V~~v~~ 177 (280)
.+-.|+..+|||+.+... ... ++||-..+.+++.
T Consensus 263 ~vF~G~~~~GHYt~~~~~--~~~-~~~Dg~~~~~~~~ 296 (315)
T 2fe8_A 263 NEYTGNYQCGHYTHITAK--ETL-YRIDGAHLTKMSE 296 (315)
T ss_dssp EEEESCGGGCEEEEEEES--SSE-EEEETTEEEEESE
T ss_pred EEEECCCCccceEEEecC--Cce-eEEeCCcceeccc
Confidence 334898889999999864 323 7999999999876
No 15
>3o65_A Putative ataxin-3-like protein; papain-like fold, hydrolase-protein complex; 2.70A {Homo sapiens} PDB: 2aga_A 1yzb_A 2jri_A 2dos_A
Probab=24.50 E-value=66 Score=26.37 Aligned_cols=31 Identities=16% Similarity=0.319 Sum_probs=24.7
Q ss_pred EEEEEEEEeecCCCceEEEEEEcCCCCCeEEecCcee
Q psy18082 136 ELFSIMIHSGSASGGHYYAYIKNFSTDEWYCFNDQSV 172 (280)
Q Consensus 136 ~L~aVi~H~Gs~~sGHY~~yir~~~~~~W~~fnD~~V 172 (280)
...|+|++. .-|++|..|- +|.||-+|-..-
T Consensus 109 ~~~~FI~N~----~~HWfaiRki--gg~WyNLdS~l~ 139 (191)
T 3o65_A 109 NERSFICNY----KQHWFTIRKF--GKHWFNLNSLLA 139 (191)
T ss_dssp GCCEEEEEE----SSCEEEEEEE--TTEEEECCTTSS
T ss_pred hhhhhhhcc----ccceeeEEec--CCEEEEccCCCC
Confidence 346888886 4899998887 899999987543
No 16
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=22.65 E-value=41 Score=18.37 Aligned_cols=14 Identities=29% Similarity=0.781 Sum_probs=10.6
Q ss_pred EEEEcCCCCCeEEecC
Q psy18082 154 AYIKNFSTDEWYCFND 169 (280)
Q Consensus 154 ~yir~~~~~~W~~fnD 169 (280)
+|+|. +|.|+..++
T Consensus 12 ~Yvr~--dg~WV~l~t 25 (27)
T 2ww6_A 12 AYVRK--FGEWVLLST 25 (27)
T ss_dssp EEEEE--TTEEEEGGG
T ss_pred eeEEE--cCeEEEccc
Confidence 47887 889987654
No 17
>4ekf_A Adenain; alpha and beta protein (A+B), hydrolase; HET: CSD; 0.98A {Human adenovirus 2} PDB: 1nln_A 1avp_A
Probab=21.91 E-value=81 Score=25.87 Aligned_cols=32 Identities=25% Similarity=0.442 Sum_probs=23.2
Q ss_pred EEEEEEee-cCCCceEEEEEEcCCCCCeEEecC
Q psy18082 138 FSIMIHSG-SASGGHYYAYIKNFSTDEWYCFND 169 (280)
Q Consensus 138 ~aVi~H~G-s~~sGHY~~yir~~~~~~W~~fnD 169 (280)
.|||+--| ...+=|+.++.-+|.+.+.|.||-
T Consensus 40 ~AIVNTg~retGGvHWiA~Aw~P~s~~~YmFDP 72 (204)
T 4ekf_A 40 CAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEP 72 (204)
T ss_dssp EEEEESCC----CCCEEEEEEETTTTEEEEECT
T ss_pred eeEEecCCcccCceeEEEeEecCCcceEEEeCC
Confidence 56666655 445559999999998888998874
Done!