Query psy18086
Match_columns 166
No_of_seqs 112 out of 1037
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 22:15:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ex7_A Guanylate kinase; subst 100.0 2.7E-31 9.2E-36 213.3 12.1 116 2-144 70-185 (186)
2 3tvt_A Disks large 1 tumor sup 99.9 1.4E-27 4.8E-32 203.8 11.3 118 3-158 168-285 (292)
3 1kjw_A Postsynaptic density pr 99.9 6.4E-26 2.2E-30 192.8 11.6 118 3-159 173-291 (295)
4 3a00_A Guanylate kinase, GMP k 99.9 3.3E-24 1.1E-28 166.6 8.7 115 2-144 70-185 (186)
5 2xkx_A Disks large homolog 4; 99.9 1.4E-23 4.7E-28 195.7 13.9 119 2-159 598-717 (721)
6 3tau_A Guanylate kinase, GMP k 99.9 2.2E-23 7.5E-28 165.2 8.9 118 2-149 77-194 (208)
7 3tsz_A Tight junction protein 99.9 4.2E-23 1.4E-27 181.6 10.2 115 8-158 273-389 (391)
8 3kfv_A Tight junction protein 99.9 5.1E-23 1.8E-27 177.7 10.2 104 12-145 186-291 (308)
9 1s96_A Guanylate kinase, GMP k 99.9 3.6E-22 1.2E-26 162.3 14.4 117 2-148 86-202 (219)
10 3ney_A 55 kDa erythrocyte memb 99.9 8.4E-23 2.9E-27 165.7 8.2 103 2-144 88-190 (197)
11 3shw_A Tight junction protein 99.9 2E-22 6.7E-27 182.2 10.9 115 8-158 265-381 (468)
12 4dey_A Voltage-dependent L-typ 99.9 1.8E-22 6.2E-27 176.5 4.4 105 12-146 217-323 (337)
13 3tr0_A Guanylate kinase, GMP k 99.8 1.1E-18 3.6E-23 134.6 12.4 117 3-149 76-192 (205)
14 2qor_A Guanylate kinase; phosp 99.8 1.7E-18 5.8E-23 135.8 13.1 115 3-145 82-198 (204)
15 1lvg_A Guanylate kinase, GMP k 99.8 2E-18 6.9E-23 136.2 12.8 118 2-146 73-190 (198)
16 1kgd_A CASK, peripheral plasma 99.8 1.6E-19 5.4E-24 139.8 6.2 102 3-143 75-178 (180)
17 3lnc_A Guanylate kinase, GMP k 99.7 5.8E-18 2E-22 134.8 9.6 117 3-149 97-214 (231)
18 1z6g_A Guanylate kinase; struc 99.6 3.1E-14 1E-18 113.9 13.2 117 3-147 93-211 (218)
19 2j41_A Guanylate kinase; GMP, 99.5 2.8E-14 9.5E-19 109.7 8.8 114 3-146 76-189 (207)
20 1znw_A Guanylate kinase, GMP k 98.8 1.6E-07 5.5E-12 73.4 13.6 110 4-143 90-201 (207)
21 1gvn_B Zeta; postsegregational 98.7 2.3E-09 8E-14 89.4 1.8 116 6-145 91-230 (287)
22 3lw7_A Adenylate kinase relate 98.4 1E-05 3.5E-10 58.9 13.0 99 17-144 69-177 (179)
23 3fb4_A Adenylate kinase; psych 97.7 0.00015 5.1E-09 56.0 8.8 97 23-143 77-214 (216)
24 3dl0_A Adenylate kinase; phosp 97.7 0.00025 8.6E-09 54.8 9.8 97 23-143 77-214 (216)
25 1zak_A Adenylate kinase; ATP:A 97.6 0.00015 5.1E-09 56.6 7.2 77 67-147 137-214 (222)
26 2bwj_A Adenylate kinase 5; pho 97.6 0.00086 2.9E-08 50.5 11.1 66 69-143 118-196 (199)
27 2c95_A Adenylate kinase 1; tra 97.6 0.00059 2E-08 51.3 10.0 99 15-143 79-193 (196)
28 3t61_A Gluconokinase; PSI-biol 97.5 0.00034 1.1E-08 53.7 8.2 100 15-145 77-181 (202)
29 1jjv_A Dephospho-COA kinase; P 97.5 0.00015 5.1E-09 55.7 5.7 70 69-146 126-199 (206)
30 1nn5_A Similar to deoxythymidy 97.5 0.0022 7.6E-08 48.7 12.0 71 69-146 132-203 (215)
31 1qhx_A CPT, protein (chloramph 97.4 0.00044 1.5E-08 51.5 7.0 99 10-140 72-175 (178)
32 2f6r_A COA synthase, bifunctio 97.3 0.00012 4E-09 60.5 3.7 68 69-144 202-269 (281)
33 4eun_A Thermoresistant glucoki 97.3 0.00082 2.8E-08 51.7 8.3 68 67-144 125-194 (200)
34 4i1u_A Dephospho-COA kinase; s 97.3 0.00056 1.9E-08 55.5 7.5 69 69-145 134-203 (210)
35 2z0h_A DTMP kinase, thymidylat 97.3 0.00037 1.3E-08 52.4 5.4 69 69-144 124-192 (197)
36 1knq_A Gluconate kinase; ALFA/ 97.3 0.0033 1.1E-07 46.7 10.5 67 67-142 104-172 (175)
37 1vht_A Dephospho-COA kinase; s 97.2 0.00026 9E-09 54.9 4.4 69 69-145 128-196 (218)
38 3kb2_A SPBC2 prophage-derived 97.2 0.015 5.3E-07 42.3 13.8 71 68-145 96-168 (173)
39 1ly1_A Polynucleotide kinase; 97.2 0.0013 4.4E-08 48.5 8.0 71 14-106 65-146 (181)
40 1qf9_A UMP/CMP kinase, protein 97.2 0.0053 1.8E-07 45.5 10.9 67 69-143 113-191 (194)
41 3tlx_A Adenylate kinase 2; str 97.1 0.00059 2E-08 54.8 5.7 99 24-142 107-242 (243)
42 2plr_A DTMP kinase, probable t 97.1 0.013 4.5E-07 44.1 12.7 67 69-144 124-208 (213)
43 2cdn_A Adenylate kinase; phosp 97.1 0.0025 8.7E-08 48.6 8.7 66 69-142 129-200 (201)
44 1ukz_A Uridylate kinase; trans 97.1 0.0057 1.9E-07 46.5 10.6 67 69-143 123-201 (203)
45 2pbr_A DTMP kinase, thymidylat 97.0 0.015 5E-07 43.2 12.2 66 69-143 125-191 (195)
46 1uf9_A TT1252 protein; P-loop, 96.9 0.00044 1.5E-08 52.2 2.5 69 69-145 127-195 (203)
47 2v54_A DTMP kinase, thymidylat 96.9 0.016 5.4E-07 43.7 11.2 67 69-146 124-193 (204)
48 3trf_A Shikimate kinase, SK; a 96.9 0.01 3.5E-07 44.3 10.0 69 68-144 99-175 (185)
49 4eaq_A DTMP kinase, thymidylat 96.8 0.019 6.6E-07 45.8 11.9 104 17-145 102-226 (229)
50 2if2_A Dephospho-COA kinase; a 96.8 0.0013 4.6E-08 50.1 4.4 67 69-144 126-192 (204)
51 1nks_A Adenylate kinase; therm 96.7 0.0075 2.6E-07 44.6 8.4 65 69-141 118-193 (194)
52 3zvl_A Bifunctional polynucleo 96.6 0.0022 7.4E-08 55.8 5.2 89 10-124 295-396 (416)
53 3ake_A Cytidylate kinase; CMP 96.6 0.012 4.2E-07 44.3 8.8 67 69-142 138-207 (208)
54 2wwf_A Thymidilate kinase, put 96.4 0.015 5.3E-07 44.0 8.4 67 69-144 133-200 (212)
55 3lv8_A DTMP kinase, thymidylat 96.4 0.021 7.1E-07 46.6 9.6 124 11-146 102-231 (236)
56 1kht_A Adenylate kinase; phosp 96.3 0.02 6.8E-07 42.3 8.4 64 69-141 117-191 (192)
57 2vli_A Antibiotic resistance p 96.3 0.056 1.9E-06 39.9 10.6 64 68-144 106-172 (183)
58 3vaa_A Shikimate kinase, SK; s 96.3 0.12 4.1E-06 39.4 12.8 69 68-144 119-196 (199)
59 2rhm_A Putative kinase; P-loop 95.9 0.037 1.3E-06 41.1 7.9 54 14-89 67-126 (193)
60 1y63_A LMAJ004144AAA protein; 95.6 0.061 2.1E-06 40.6 8.3 65 69-144 103-175 (184)
61 1zuh_A Shikimate kinase; alpha 95.3 0.044 1.5E-06 40.4 6.5 64 68-141 98-167 (168)
62 2jaq_A Deoxyguanosine kinase; 95.3 0.059 2E-06 40.2 7.2 67 69-143 127-200 (205)
63 3cm0_A Adenylate kinase; ATP-b 95.2 0.041 1.4E-06 40.8 6.1 66 69-141 108-184 (186)
64 2h92_A Cytidylate kinase; ross 95.2 0.14 4.8E-06 39.1 9.2 71 68-142 137-216 (219)
65 1q3t_A Cytidylate kinase; nucl 95.1 0.18 6E-06 39.5 9.9 70 69-142 155-233 (236)
66 3hdt_A Putative kinase; struct 94.8 0.27 9.1E-06 39.5 10.3 72 67-143 137-218 (223)
67 4edh_A DTMP kinase, thymidylat 94.7 1.1 3.6E-05 35.5 13.5 119 15-145 83-208 (213)
68 1zd8_A GTP:AMP phosphotransfer 94.7 0.11 3.6E-06 40.4 7.5 70 69-146 110-217 (227)
69 3fdi_A Uncharacterized protein 94.7 0.17 5.7E-06 39.6 8.6 72 67-142 117-197 (201)
70 3v9p_A DTMP kinase, thymidylat 94.4 0.091 3.1E-06 42.5 6.7 124 8-143 96-226 (227)
71 4hlc_A DTMP kinase, thymidylat 94.4 1.3 4.4E-05 34.7 13.1 116 16-144 77-201 (205)
72 2pt5_A Shikimate kinase, SK; a 94.3 0.32 1.1E-05 35.3 8.9 64 69-144 95-164 (168)
73 4tmk_A Protein (thymidylate ki 94.2 1.2 4E-05 35.4 12.6 117 16-145 85-208 (213)
74 1e4v_A Adenylate kinase; trans 94.0 0.054 1.9E-06 41.7 4.3 52 86-141 154-213 (214)
75 1e6c_A Shikimate kinase; phosp 94.0 0.56 1.9E-05 34.0 9.6 66 69-142 96-169 (173)
76 1tev_A UMP-CMP kinase; ploop, 93.9 0.34 1.2E-05 35.6 8.3 67 69-143 116-194 (196)
77 1ltq_A Polynucleotide kinase; 93.8 0.6 2.1E-05 37.4 10.4 39 67-106 106-146 (301)
78 2xb4_A Adenylate kinase; ATP-b 93.8 0.18 6.2E-06 39.3 7.0 20 69-89 108-127 (223)
79 3umf_A Adenylate kinase; rossm 93.5 0.85 2.9E-05 36.5 10.8 69 69-144 135-214 (217)
80 1rz3_A Hypothetical protein rb 93.4 0.02 7E-07 44.0 0.9 50 69-124 146-200 (201)
81 3be4_A Adenylate kinase; malar 93.3 0.95 3.2E-05 34.8 10.4 20 69-89 114-133 (217)
82 1uj2_A Uridine-cytidine kinase 92.9 0.13 4.6E-06 40.7 5.0 69 69-145 153-235 (252)
83 2vp4_A Deoxynucleoside kinase; 92.8 0.17 5.7E-06 39.7 5.5 69 69-143 149-224 (230)
84 3iij_A Coilin-interacting nucl 92.6 0.16 5.3E-06 37.7 4.8 28 68-97 98-125 (180)
85 4e22_A Cytidylate kinase; P-lo 92.4 0.47 1.6E-05 37.9 7.7 74 68-145 164-246 (252)
86 2iyv_A Shikimate kinase, SK; t 92.2 0.089 3E-06 39.1 3.0 69 69-145 96-170 (184)
87 3a4m_A L-seryl-tRNA(SEC) kinas 91.5 1.3 4.3E-05 35.4 9.3 68 68-143 101-173 (260)
88 3ch4_B Pmkase, phosphomevalona 90.1 0.85 2.9E-05 36.7 7.0 64 67-144 127-190 (202)
89 3hjn_A DTMP kinase, thymidylat 89.8 5.6 0.00019 30.7 11.6 117 15-143 73-191 (197)
90 1kag_A SKI, shikimate kinase I 89.6 0.46 1.6E-05 34.6 4.7 64 69-142 99-171 (173)
91 1cke_A CK, MSSA, protein (cyti 89.4 0.85 2.9E-05 34.6 6.3 72 68-143 142-222 (227)
92 1gtv_A TMK, thymidylate kinase 89.2 0.076 2.6E-06 40.1 0.2 62 69-137 135-207 (214)
93 2gks_A Bifunctional SAT/APS ki 89.0 0.32 1.1E-05 44.0 4.1 98 16-143 436-540 (546)
94 1aky_A Adenylate kinase; ATP:A 88.9 3.8 0.00013 31.2 9.7 66 69-142 114-218 (220)
95 2pez_A Bifunctional 3'-phospho 88.3 1.4 4.7E-05 32.5 6.6 67 68-143 106-175 (179)
96 2bdt_A BH3686; alpha-beta prot 88.2 3.8 0.00013 30.3 9.0 24 67-91 102-125 (189)
97 3sr0_A Adenylate kinase; phosp 88.0 1.3 4.6E-05 34.8 6.7 67 69-142 106-203 (206)
98 3asz_A Uridine kinase; cytidin 87.6 2.7 9.2E-05 31.6 8.0 71 69-143 127-203 (211)
99 3a8t_A Adenylate isopentenyltr 87.6 0.67 2.3E-05 40.1 5.1 21 67-88 174-194 (339)
100 2grj_A Dephospho-COA kinase; T 87.4 1.1 3.6E-05 35.0 5.7 26 116-144 162-187 (192)
101 2qt1_A Nicotinamide riboside k 86.0 0.55 1.9E-05 35.6 3.3 66 69-143 132-205 (207)
102 1via_A Shikimate kinase; struc 85.5 2.3 7.8E-05 31.2 6.4 66 67-142 93-165 (175)
103 2ze6_A Isopentenyl transferase 85.4 0.99 3.4E-05 36.1 4.7 23 67-89 117-139 (253)
104 1ak2_A Adenylate kinase isoenz 84.5 6.2 0.00021 30.4 8.8 68 69-143 125-230 (233)
105 2ocp_A DGK, deoxyguanosine kin 83.8 7.4 0.00025 30.1 9.0 37 69-106 152-192 (241)
106 1p5z_B DCK, deoxycytidine kina 82.0 8 0.00027 30.4 8.7 70 69-143 177-258 (263)
107 1m7g_A Adenylylsulfate kinase; 81.6 10 0.00035 28.6 8.9 63 68-143 133-202 (211)
108 3ld9_A DTMP kinase, thymidylat 80.0 14 0.00048 29.5 9.6 115 17-145 100-217 (223)
109 3r20_A Cytidylate kinase; stru 76.7 17 0.00059 29.2 9.2 74 67-143 146-227 (233)
110 1sq5_A Pantothenate kinase; P- 76.5 5.1 0.00018 32.8 6.1 52 69-125 217-297 (308)
111 3gmt_A Adenylate kinase; ssgci 75.3 2.3 7.8E-05 34.6 3.6 37 69-106 113-182 (230)
112 1a7j_A Phosphoribulokinase; tr 73.4 1.4 4.9E-05 36.2 2.0 31 69-99 150-184 (290)
113 2jeo_A Uridine-cytidine kinase 72.9 4.7 0.00016 31.5 4.8 70 69-142 156-234 (245)
114 4f6r_C Stathmin-like domain R1 72.2 3.7 0.00012 29.4 3.6 46 57-105 8-56 (87)
115 3tmk_A Thymidylate kinase; pho 70.8 37 0.0013 26.8 10.0 118 15-146 78-205 (216)
116 2yvu_A Probable adenylyl-sulfa 68.1 15 0.00052 26.9 6.5 63 68-143 114-183 (186)
117 1x6v_B Bifunctional 3'-phospho 63.2 12 0.00041 34.8 6.0 73 67-151 152-229 (630)
118 2p5t_B PEZT; postsegregational 63.0 13 0.00043 29.2 5.4 48 18-88 103-157 (253)
119 3nwj_A ATSK2; P loop, shikimat 62.3 21 0.00071 28.8 6.7 19 68-87 143-161 (250)
120 3ryc_E Stathmin-4; alpha-tubul 60.0 6 0.00021 30.6 2.9 45 57-105 9-57 (143)
121 2axn_A 6-phosphofructo-2-kinas 55.5 49 0.0017 29.4 8.5 23 67-89 147-169 (520)
122 3c8u_A Fructokinase; YP_612366 50.1 33 0.0011 25.8 5.7 50 69-123 150-207 (208)
123 1dek_A Deoxynucleoside monopho 49.0 12 0.00042 30.2 3.2 24 116-142 216-239 (241)
124 1m8p_A Sulfate adenylyltransfe 48.9 21 0.00073 32.3 5.1 60 68-143 497-566 (573)
125 4f61_I Stathmin-like domain R4 41.8 7.8 0.00027 32.4 0.9 46 57-105 8-56 (240)
126 3uie_A Adenylyl-sulfate kinase 40.8 84 0.0029 23.2 6.6 64 67-143 123-194 (200)
127 3aez_A Pantothenate kinase; tr 40.2 64 0.0022 26.6 6.4 55 69-125 220-300 (312)
128 2lqo_A Putative glutaredoxin R 38.6 79 0.0027 21.5 5.7 40 3-42 6-49 (92)
129 2bbw_A Adenylate kinase 4, AK4 37.3 70 0.0024 24.5 5.8 71 69-146 130-237 (246)
130 3oy2_A Glycosyltransferase B73 36.7 66 0.0023 25.9 5.8 58 72-148 337-394 (413)
131 1zp6_A Hypothetical protein AT 36.1 25 0.00085 25.5 2.9 67 68-145 107-177 (191)
132 3p04_A Uncharacterized BCR; SE 33.3 17 0.00059 25.6 1.5 44 7-51 12-55 (87)
133 2ga8_A Hypothetical 39.9 kDa p 29.6 59 0.002 28.1 4.6 34 69-103 291-329 (359)
134 2gek_A Phosphatidylinositol ma 26.2 1E+02 0.0035 24.3 5.2 59 72-149 330-388 (406)
135 3h3g_B Parathyroid hormone-rel 26.1 13 0.00046 20.6 -0.1 8 157-164 7-14 (24)
136 3kto_A Response regulator rece 23.3 1.7E+02 0.0057 19.4 6.2 14 92-105 112-125 (136)
137 4fn4_A Short chain dehydrogena 22.9 2.5E+02 0.0085 22.4 6.9 27 92-125 67-93 (254)
No 1
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=99.97 E-value=2.7e-31 Score=213.32 Aligned_cols=116 Identities=35% Similarity=0.529 Sum_probs=107.2
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
-++|+||+|||++++|++++++|++||+|+|++|++++|+.+++ ++++|||.|||.++|
T Consensus 70 ~~~~~g~~YGt~~~~v~~~l~~g~~vil~id~~g~~~~k~~~~~---------------------~~~~Ifi~pps~e~L 128 (186)
T 1ex7_A 70 WAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPEL---------------------NARFLFIAPPSVEDL 128 (186)
T ss_dssp EEEETTEEEEEEHHHHHHHHHHTSEEEEECCHHHHHHHHTCGGG---------------------CCEEEEEECSCHHHH
T ss_pred EEEEcCceeeeecceeeehhhCCCEEEecCCHHHHHHHHHhccc---------------------CceEEEEeCCCHHHH
Confidence 37899999999999999999999999999999999999987443 799999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
++||++||++|+++|++||..|+.||.++. .+ .||++|+|| |+ +.|+++|.+||.++
T Consensus 129 ~~RL~~Rg~e~~e~i~~Rl~~a~~e~~~~~-~~-~fD~vIvNd-dl---e~a~~~l~~iI~ae 185 (186)
T 1ex7_A 129 KKRLEGRGTETEESINKRLSAAQAELAYAE-TG-AHDKVIVND-DL---DKAYKELKDFIFAE 185 (186)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHHHT-TT-CSSEEEECS-SH---HHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHhhcc-cc-CCcEEEECc-CH---HHHHHHHHHHHHhc
Confidence 999999999999999999999999998764 23 799999999 99 99999999999765
No 2
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=99.95 E-value=1.4e-27 Score=203.76 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=105.6
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
++|+||+|||++++|++++++|++||||||++|+++|+.. . . .|++|||.|||+++|+
T Consensus 168 a~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg~~~lk~~-~--~-------------------~pi~IFI~PpS~e~L~ 225 (292)
T 3tvt_A 168 GQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVA-Q--L-------------------YPVAVFIKPKSVDSVM 225 (292)
T ss_dssp EEETTEEEEEEHHHHHHHHHHTCEEEECCCTHHHHHHHHT-T--C-------------------CCEEEEECCSCHHHHH
T ss_pred EEEccceeEEehHHHHHHHHcCCcEEEeccchhhhhcccc-c--c-------------------cceEEEEECCCHHHHH
Confidence 6899999999999999999999999999999999999988 3 3 7999999999999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhhccCCcccch
Q psy18086 83 TRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQSHRNPNLQLR 158 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~~~~~~~~~~ 158 (166)
+|+++|++++.+++..|+..+ ++++++ .||++|+|| ++ +.|+++|+++|.++. +..+|+|
T Consensus 226 ~r~~~r~~e~~~~~~~r~~k~--e~e~~~----~fD~vIvNd-dl---e~a~~~l~~iI~~e~------~~~~WVP 285 (292)
T 3tvt_A 226 EMNRRMTEEQAKKTYERAIKM--EQEFGE----YFTGVVQGD-TI---EEIYSKVKSMIWSQS------GPTIWVP 285 (292)
T ss_dssp HTCTTSCTTHHHHHHHHHHHH--HHHHTT----TCSEEECCS-SH---HHHHHHHHHHHHHHT------CSEEEEE
T ss_pred HHHhCCCchhHHHHHHHHHHH--HHhhhh----hCCEEEECc-CH---HHHHHHHHHHHHHhh------CCCeEec
Confidence 999999988777777777655 555676 899999999 99 999999999998876 5667776
No 3
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=99.93 E-value=6.4e-26 Score=192.79 Aligned_cols=118 Identities=19% Similarity=0.300 Sum_probs=106.2
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
++++||+|||++++|++++++|++||||+|++|+++++.. .+ .|++|||+|||.++|+
T Consensus 173 ~~~~g~~YGt~~~~V~~~~~~G~~vildid~~g~~~l~~~-~~---------------------~pi~IfI~pps~~~L~ 230 (295)
T 1kjw_A 173 GQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAA-HL---------------------HPIAIFIRPRSLENVL 230 (295)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEECCCTTHHHHHHHT-TC---------------------CCEEEEECCSSHHHHH
T ss_pred EEEcCcEeeeeHHHHHHHHhcCCeEEEEeCHHHHHHHHhc-cc---------------------CCeEEEEECCCHHHHH
Confidence 6899999999999999999999999999999999999987 44 6799999999999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHH-HHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhhccCCcccchh
Q psy18086 83 TRLRGRGTETEDSLRRRLDLAR-RDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQSHRNPNLQLRR 159 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~-~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~~~~~~~~~~~ 159 (166)
+ |++|+ |+++|++||..|. .|+.+++ .||++|+|| ++ +.|+++|.++|... ++..+|+|.
T Consensus 231 ~-L~~R~--t~~~i~~rl~~a~~~e~~~~~----~fd~vivNd-~l---e~a~~~l~~ii~~~------~~~~~Wvp~ 291 (295)
T 1kjw_A 231 E-INKRI--TEEQARKAFDRATKLEQEFTE----CFSAIVEGD-SF---EEIYHKVKRVIEDL------SGPYIWVPA 291 (295)
T ss_dssp H-HCTTS--CHHHHHHHHHHHHHHHHHHGG----GCSEEECCS-SH---HHHHHHHHHHHHHH------SCSEEEEEC
T ss_pred H-HHhcC--CHHHHHHHHHHHHHHHHhccc----cCeEEEECc-CH---HHHHHHHHHHHHhc------cCCCEEeeC
Confidence 8 99888 5678999999995 4888877 899999999 99 99999999999754 477788874
No 4
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.90 E-value=3.3e-24 Score=166.60 Aligned_cols=115 Identities=36% Similarity=0.541 Sum_probs=74.3
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHH-hhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKR-AGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEE 80 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~ 80 (166)
.+.++|++||+++++++++++.|++|++|+|++|++++++ . ++ .+++|||.|||.++
T Consensus 70 ~~~~~~~~yg~~~~~i~~~l~~g~~~il~~~~~g~~~l~~~~-~~---------------------~~~~i~i~~p~~~~ 127 (186)
T 3a00_A 70 WAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIP-EL---------------------NARFLFIAPPSVED 127 (186)
T ss_dssp EEEETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHTCG-GG---------------------CCEEEEEECSCC--
T ss_pred EEEEeceeccCcHHHHHHHHHcCCeEEEEEcHHHHHHHHHhc-CC---------------------CeEEEEEECcCHHH
Confidence 4678999999999999999999999999999999999998 6 33 78999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 81 LETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 81 Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
|++||++|+++++++|++||..+..++.+.. +. .||++|+|| ++ +.|+++|.+++..+
T Consensus 128 l~~Rl~~Rg~~~~~~i~~rl~~~~~~~~~~~-~~-~~d~vi~nd-~~---~~a~~~l~~~i~~~ 185 (186)
T 3a00_A 128 LKKRLEGRGTETEESINKRLSAAQAELAYAE-TG-AHDKVIVND-DL---DKAYKELKDFIFAE 185 (186)
T ss_dssp --------------------------------CC-CCSEEEECS-SH---HHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc-cc-CCcEEEECc-CH---HHHHHHHHHHHHhc
Confidence 9999999999999999999999988887662 12 899999999 99 99999999999654
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.90 E-value=1.4e-23 Score=195.71 Aligned_cols=119 Identities=19% Similarity=0.297 Sum_probs=106.6
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
-++|+||+|||++++|++++++|++||||+|++|+++++.. .+ .|++|||+|||+++|
T Consensus 598 ~~~~~g~~YGt~~~~v~~~~~~g~~~ildi~~~~~~~l~~~-~~---------------------~p~~ifi~pps~~~L 655 (721)
T 2xkx_A 598 AGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAA-HL---------------------HPIAIFIRPRSLENV 655 (721)
T ss_pred EEEECCccceeeHHHHHHHHHCCCcEEEeCCHHHHHHHHhc-cc---------------------CCEEEEEeCCcHHHH
Confidence 36899999999999999999999999999999999999977 44 579999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHH-HHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhhccCCcccchh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLAR-RDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQSHRNPNLQLRR 159 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~-~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~~~~~~~~~~~ 159 (166)
++ |++|+ |+++|++||..|. .|+.+++ .||++|+|| ++ ++|+++|.++|..+ ++..+|+|-
T Consensus 656 ~~-l~~R~--t~~~~~~rl~~a~~~e~~~~~----~fd~vi~Nd-~l---~~a~~~l~~~i~~~------~~~~~Wvp~ 717 (721)
T 2xkx_A 656 LE-INKRI--TEEQARKAFDRATKLEQEFTE----CFSAIVEGD-SF---EEIYHKVKRVIEDL------SGPYIWVPA 717 (721)
T ss_pred HH-HhccC--CHHHHHHHHHHHHHHHHhccc----cCcEEEECc-CH---HHHHHHHHHHHHhc------cCCcEEeec
Confidence 99 99998 4678999999995 4888877 999999999 99 99999999999764 477788874
No 6
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.89 E-value=2.2e-23 Score=165.20 Aligned_cols=118 Identities=25% Similarity=0.393 Sum_probs=102.2
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
.+.++|++|||+++.++++++.|+.||+|+|++|+.++++. ++ .+++||+.|||.++|
T Consensus 77 ~~~~~~~~yg~~~~~i~~~l~~g~~vild~~~~g~~~~~~~---~~-------------------~~~~i~i~~ps~~~l 134 (208)
T 3tau_A 77 YAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKA---MP-------------------EGIFIFLTPPDLSEL 134 (208)
T ss_dssp EEEETTEEEEEEHHHHHHHHHTTCCEEEECCHHHHHHHHHH---CT-------------------TSEEEEEECTTTTTS
T ss_pred EEEEccccCCCcHHHHHHHHHcCCeEEEEeeHHHHHHHHHh---CC-------------------CeEEEEEeCCCHHHH
Confidence 35789999999999999999999999999999999999998 66 789999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQS 149 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~ 149 (166)
++||.+|+++++++|+.||..+..++.+.+ .||++|+|+ ++ ++++++|.+++..+..++.
T Consensus 135 ~~Rl~~R~~~~~e~i~~Rl~~~~~e~~~~~----~~d~vivN~-~~---~~~~~~l~~~i~~~~~~~~ 194 (208)
T 3tau_A 135 KNRIIGRGTESMEVVEERMETAKKEIEMMA----SYDYAVVND-VV---ANAVQKIKGIVETEHLKTE 194 (208)
T ss_dssp SCC-------CCHHHHHHHHHHHHHHHHGG----GSSEEEECS-SH---HHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhhc----cCCEEEECc-CH---HHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999988888877 899999999 99 9999999999988765443
No 7
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.88 E-value=4.2e-23 Score=181.60 Aligned_cols=115 Identities=15% Similarity=0.157 Sum_probs=97.5
Q ss_pred ccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhc
Q psy18086 8 KSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRG 87 (166)
Q Consensus 8 n~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~ 87 (166)
+||=+|+++|++++++|++||||||+||+++||.. .+ .|++|||+|||+++|++|.+.
T Consensus 273 ~Y~Fv~~~~V~~~~~~Gk~~iLdId~qg~~~l~~~-~~---------------------~p~~IFI~PPS~~~L~~~~~r 330 (391)
T 3tsz_A 273 SSGIIRLHTIKQIIDQDKHALLDVTPNAVDRLNYA-QW---------------------YPIVVFLNPDSKQGVKTMRMR 330 (391)
T ss_dssp --CCCCHHHHHHHHTTTCEEEECCCHHHHHHHHHT-TC---------------------CCEEEEEECCCHHHHHHHHHH
T ss_pred cCCcCcHHHHHHHHHcCCEEEEEeCHHHHHHHHhC-CC---------------------CCEEEEEeCcCHHHHHHHHhc
Confidence 45667999999999999999999999999999988 33 789999999999999987333
Q ss_pred CCCCCHHHHHHHHHHHH-HHhhcCCCCCCcccEEEEcCCCCCCHh-HHHHHHHHHHHhhhhhhhccCCcccch
Q psy18086 88 RGTETEDSLRRRLDLAR-RDMSYGKDSLRSYGIISELAFFLEYNS-AAGEIFEHFGLKSSEIQSHRNPNLQLR 158 (166)
Q Consensus 88 Rgtetee~I~~Rl~~A~-~e~~~~~~~~~~fD~vIvNd~dl~~~e-~a~~~l~~ii~~~~~~~~~~~~~~~~~ 158 (166)
..++|++.+++|++.|. .|+.|++ +||++|+|| ++ + .|+++|+++|.++. +...|+|
T Consensus 331 ~~~~s~e~~~~~~~~a~~~e~~~~~----~fd~vivNd-~l---~~~a~~~l~~ii~~~~------~~~~Wvp 389 (391)
T 3tsz_A 331 LCPESRKSARKLYERSHKLRKNNHH----LFTTTINLN-SM---NDGWYGALKEAIQQQQ------NQLVWVS 389 (391)
T ss_dssp HCSSCCCCHHHHHHHHHHHHHHHGG----GCSEEEECC-TT---CCHHHHHHHHHHHHHH------HSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHhccc----cCcEEEECC-Cc---HHHHHHHHHHHHHHhc------CCCeecc
Confidence 34588889999999984 4677888 999999999 99 8 79999999998765 4556665
No 8
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=99.88 E-value=5.1e-23 Score=177.70 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=90.8
Q ss_pred CcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCCC
Q psy18086 12 VNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGTE 91 (166)
Q Consensus 12 Ts~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgte 91 (166)
+|+++|++++++|++||||||+||+++||.. .+ .|++|||+|||+++|++|+..++++
T Consensus 186 is~~~V~~vl~~Gk~~ILDId~QGa~~lk~~-~~---------------------~pi~IFI~PPS~eeL~~rr~R~~~e 243 (308)
T 3kfv_A 186 IKLDTVRVIAEKDKHALLDVTPSAIERLNYV-QY---------------------YPIVVFFIPESRPALKALRQWLAPA 243 (308)
T ss_dssp CCHHHHHHHHHTTCEEEECCCHHHHHHHHHT-TC---------------------CCEEEEEEESCHHHHHHHHHHHSTT
T ss_pred ecHHHHHHHHHCCCcEEEEECHHHHHHHHhc-CC---------------------CCEEEEEeCCCHHHHHHHHhcCCCC
Confidence 5899999999999999999999999999988 33 7899999999999999974433568
Q ss_pred CHHHHHHHHHHHH-HHhhcCCCCCCcccEEE-EcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 92 TEDSLRRRLDLAR-RDMSYGKDSLRSYGIIS-ELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 92 tee~I~~Rl~~A~-~e~~~~~~~~~~fD~vI-vNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
|++.++++++.|. .|+.|++ .||++| +|| |+ +.|+++|++||.+..
T Consensus 244 see~~~r~~~aa~eiE~~~~~----~FD~vI~VND-dl---e~A~~~L~~iI~~~~ 291 (308)
T 3kfv_A 244 SRRSTRRLYAQAQKLRKHSSH----LFTATIPLNG-TS---DTWYQELKAIIREQQ 291 (308)
T ss_dssp CCCCHHHHHHHHHHHHHHHGG----GCSEEEEECS-SS---THHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhhhc----cCcEEEEcCC-CH---HHHHHHHHHHHHHhc
Confidence 8888888878773 4677887 999999 999 99 999999999997754
No 9
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.88 E-value=3.6e-22 Score=162.27 Aligned_cols=117 Identities=29% Similarity=0.408 Sum_probs=108.2
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
++.++|++|||+++.++++++.|++||||+|++|+.++++. ++ ..++|||.|||+++|
T Consensus 86 ~~~~~~~~yg~~~~~v~~~l~~G~illLDLD~~~~~~i~~~---l~-------------------~~~tI~i~th~~~~l 143 (219)
T 1s96_A 86 HAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQK---MP-------------------HARSIFILPPSKIEL 143 (219)
T ss_dssp EEEETTEEEEEEHHHHHHHHTTTCEEEEECCHHHHHHHHHH---CT-------------------TCEEEEEECSSHHHH
T ss_pred HHHHHhccCCCCHHHHHHHHhcCCeEEEEECHHHHHHHHHH---cc-------------------CCEEEEEECCCHHHH
Confidence 46788999999999999999999999999999999999998 65 578999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQ 148 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~ 148 (166)
++||+.||++|+++|++|+..|..|+.++. .||++|+|| ++ ++|+++|.+++..+....
T Consensus 144 ~~Rl~~rG~~~~e~i~~rl~~a~~e~~~~~----~~d~~i~Nd-~l---~~a~~~l~~ii~~~~~~~ 202 (219)
T 1s96_A 144 DRRLRGRGQDSEEVIAKRMAQAVAEMSHYA----EYDYLIVND-DF---DTALTDLKTIIRAERLRM 202 (219)
T ss_dssp HHHHHTTSCSCHHHHHHHHHHHHHHHTTGG----GSSEEEECS-SH---HHHHHHHHHHHHHHHTBH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHhhcc----CCCEEEECc-CH---HHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999988998766 899999999 99 999999999998876543
No 10
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.87 E-value=8.4e-23 Score=165.68 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=90.2
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
.++++||+|||++++|++++++|++||||+|++|++++|+. ++ .|++|||.|||.
T Consensus 88 ~~~~~~n~YGt~~~~v~~~l~~G~~vildid~qg~~~~~~~---~~-------------------~~~~Ifi~Pps~--- 142 (197)
T 3ney_A 88 FGSYQGNMFGTKFETVHQIHKQNKIAILDIEPQTLKIVRTA---EL-------------------SPFIVFIAPTDQ--- 142 (197)
T ss_dssp EEEETTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHCST---TT-------------------CEEEEEEEECCB---
T ss_pred hhhhhceecccchhhHHHHHhcCCeEEEEECHHHHHHHHhc---CC-------------------CceEEEEeCCCc---
Confidence 36789999999999999999999999999999999999988 55 799999999996
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
+|++|+.+.|++|++.++ ..+++ .||++|+|| |+ +.|+++|.+++.+.
T Consensus 143 -----~~~~e~~~~i~~r~~~~~--~~~~~----~fd~vivNd-~l---~~a~~~l~~ii~~~ 190 (197)
T 3ney_A 143 -----GTQTEALQQLQKDSEAIR--SQYAH----YFDLSLVNN-GV---DETLKKLQEAFDQA 190 (197)
T ss_dssp -----SSCCHHHHHHHHHHHHHH--HHHGG----GCSEEEEES-CH---HHHHHHHHHHHHHC
T ss_pred -----cccchHHHHHHHHHHHHH--Hhhcc----CCCEEEECC-CH---HHHHHHHHHHHHHc
Confidence 367777788999986553 34555 899999999 99 99999999999664
No 11
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=182.17 Aligned_cols=115 Identities=15% Similarity=0.157 Sum_probs=98.5
Q ss_pred ccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhc
Q psy18086 8 KSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRG 87 (166)
Q Consensus 8 n~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~ 87 (166)
+||=|++++|++++++|++||||||+||+++||.. .+ .|++|||+|||+++|+++++.
T Consensus 265 ~Y~FTs~~~V~~vl~~Gk~~iLdId~qg~~~l~~~-~~---------------------~p~~IFI~PPS~e~L~~~~~r 322 (468)
T 3shw_A 265 SSGIIRLHTIKQIIDQDKHALLDVTPNAVDRLNYA-QW---------------------YPIVVFLNPDSKQGVKTMRMR 322 (468)
T ss_dssp --CBCCHHHHHHHHTTTCEEEECCCHHHHHHHHHT-TC---------------------CCEEEEEECSCHHHHHHHHHH
T ss_pred cCCcccHHHHHHHHHCCCeEEEEeCHHHHHHHHhc-CC---------------------CCEEEEEeCcCHHHHHHHHhc
Confidence 34459999999999999999999999999999988 43 789999999999999975444
Q ss_pred CCCCCHHHHHHHHHHHH-HHhhcCCCCCCcccEEEEcCCCCCCHh-HHHHHHHHHHHhhhhhhhccCCcccch
Q psy18086 88 RGTETEDSLRRRLDLAR-RDMSYGKDSLRSYGIISELAFFLEYNS-AAGEIFEHFGLKSSEIQSHRNPNLQLR 158 (166)
Q Consensus 88 Rgtetee~I~~Rl~~A~-~e~~~~~~~~~~fD~vIvNd~dl~~~e-~a~~~l~~ii~~~~~~~~~~~~~~~~~ 158 (166)
..+++++.+++|++.|. .|+.|++ +||++|+|| ++ + .|+++|+++|.++. +...|+|
T Consensus 323 l~~~see~~~r~~~~a~~~e~~~~~----~fD~vIvNd-dl---~d~a~~~L~~ii~~~~------~~~~WvP 381 (468)
T 3shw_A 323 LCPESRKSARKLYERSHKLRKNNHH----LFTTTINLN-SM---NDGWYGALKEAIQQQQ------NQLVWVS 381 (468)
T ss_dssp HCTTCCCCHHHHHHHHHHHHHHHGG----GCSEEEECB-TT---BCHHHHHHHHHHHHHH------TSCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHhhhc----cCCEEEECC-Cc---HHHHHHHHHHHHHHhc------CCCEEeC
Confidence 45788889999999984 4778888 999999999 88 8 99999999998875 5566766
No 12
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=99.85 E-value=1.8e-22 Score=176.53 Aligned_cols=105 Identities=16% Similarity=0.170 Sum_probs=91.4
Q ss_pred CcHHHHHHHHhcCCcEEEEeCHH-HHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCC
Q psy18086 12 VNRAAVEAVINSGKTCVLDIEVQ-GVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGT 90 (166)
Q Consensus 12 Ts~~~V~~v~~~Gk~~vldid~~-Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt 90 (166)
+..+.+.++.++|++||||||+| |+.+||+. ++ .|++|||.|||+++|++||++|||
T Consensus 217 seVe~i~~v~~~Gk~vILDIDvQnGa~qlk~~---~~-------------------~~i~IFI~PPS~eeLe~RL~~RGt 274 (337)
T 4dey_A 217 SEIERIFELARTLQLVVLDADTINHPAQLSKT---SL-------------------APIVVYVKISSPKVLQRLIKSRGK 274 (337)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTCCSGGGTTTS---SC-------------------CCEEEEECCSCHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHhCCCEEEEEeCcHHHHHHHHhc---CC-------------------CCEEEEEECcCHHHHHHHHHhCCc
Confidence 34444555667999999999998 99999998 65 799999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhc-CCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 91 ETEDSLRRRLDLARRDMSY-GKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 91 etee~I~~Rl~~A~~e~~~-~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
++++.|+.+|+.|+.+++. ++ .||++|+|| |+ +.|+++|.+||.....
T Consensus 275 ~~~~rl~~al~~ae~E~~~~~~----~FDyvIVND-dL---e~A~~~L~~iI~~~~~ 323 (337)
T 4dey_A 275 SQAKHLNVQMVAADKLAQCPPE----LFDVILDEN-QL---EDACEHLADYLEAYWK 323 (337)
T ss_dssp HHHTTHHHHHHHHHHHHHSCGG----GCSEEECCS-SH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhCcc----cCCEEEECC-CH---HHHHHHHHHHHHHHHh
Confidence 8788888888888877764 66 999999999 99 9999999999987653
No 13
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.79 E-value=1.1e-18 Score=134.62 Aligned_cols=117 Identities=26% Similarity=0.388 Sum_probs=106.5
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
..++++.||++.+.++++++.|+.|++|++++|+..+++. ++ .+.+||+.|||.+++.
T Consensus 76 ~~~~~~~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~~~~~---~~-------------------~~~~v~~~~~~~e~l~ 133 (205)
T 3tr0_A 76 ATIYERHYGTEKDWVLRQLKAGRDVLLEIDWQGARQIREL---FP-------------------PALSIFILPPSIEALR 133 (205)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHHH---CT-------------------TCEEEEEECSCHHHHH
T ss_pred eeeecccccchHHHHHHHHHcCCeEEEEECHHHHHHHHHh---CC-------------------CcEEEEEECcCHHHHH
Confidence 5688999999999999999999999999999999999988 65 6899999999999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhh
Q psy18086 83 TRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQS 149 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~ 149 (166)
+||.+|+++++++++.||..+..++.+.. .||++|+|+ ++ +++++++.+++.......+
T Consensus 134 ~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~----~~d~vi~n~-~~---~~~~~~l~~~i~~~~~~~~ 192 (205)
T 3tr0_A 134 ERLIKRRQDDTAIIEQRLALAREEMAHYK----EFDYLVVND-NF---DQAVQNLIHIISAERLQRD 192 (205)
T ss_dssp HHHHTCTTSCSSTHHHHHHHHHHHHTTGG----GCSEEEECS-SH---HHHHHHHHHHHHHHTTSHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHhccc----CCCEEEECC-CH---HHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999987877766 899999999 99 9999999999987655443
No 14
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.78 E-value=1.7e-18 Score=135.82 Aligned_cols=115 Identities=24% Similarity=0.396 Sum_probs=101.7
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
+.++|++||++.+.++++++.|+.||+|++++|+.++++. ++. ..+++|||.|||.++|.
T Consensus 82 ~~~~~~~~~~~~~~i~~~l~~g~~vi~d~~~~~~~~l~~~---~~~-----------------~~~~~i~l~~~s~e~l~ 141 (204)
T 2qor_A 82 DKYANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKES---KHI-----------------QDGIYIFVKPPSIDILL 141 (204)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHHHC---SSC-----------------SCCEEEEEECSCHHHHH
T ss_pred HHhCCCeecCCHHHHHHHHHcCCeEEEEECHHHHHHHHHh---cCC-----------------CCeEEEEEcCCCHHHHH
Confidence 4688999999999999999999999999999999999876 420 03689999988999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHhh--cCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 83 TRLRGRGTETEDSLRRRLDLARRDMS--YGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~~e~~--~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
+||++|+++++++|++||..++.++. +.. .||++|+|+ ++ ++++++|.+++....
T Consensus 142 ~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~~~----~~d~vi~n~-~~---e~~~~~i~~~i~~~~ 198 (204)
T 2qor_A 142 GRLKNRNTEKPEEINKRMQELTREMDEADKV----GFNYFIVND-DL---ARTYAELREYLLGSY 198 (204)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHHHHHHHHH----TCSEEEECS-SH---HHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHhhhc----cCcEEEECc-CH---HHHHHHHHHHHHHHh
Confidence 99999999999999999999987776 545 789999999 99 999999999997654
No 15
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.78 E-value=2e-18 Score=136.18 Aligned_cols=118 Identities=34% Similarity=0.492 Sum_probs=105.2
Q ss_pred eEEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 2 NVIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 2 ~~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
+..+.+|+||++.++++++++.|+.|+++++++|+..++.. .+ .|.++|+.||+++.|
T Consensus 73 ~~~~~~n~~g~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~-~~---------------------~~~~~~l~~p~~~il 130 (198)
T 1lvg_A 73 HAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKT-DL---------------------CPIYIFVQPPSLDVL 130 (198)
T ss_dssp EEEETTEEEEEEHHHHHHHHHTTCEEEEECCHHHHHHHTTS-SC---------------------CCEEEEEECSCHHHH
T ss_pred eeeecCccCCCCHHHHHHHHHcCCcEEEECCHHHHHHHHhc-CC---------------------CcEEEEEeCCCHHHH
Confidence 35688999999999999999999999999999999988755 33 688899999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
.+|+..|+++|+++|++||..+..++..++.+. .||++|+|+ ++ +.|+++|.+++.+...
T Consensus 131 de~~~~~d~~~e~~i~~~l~~~~~~~~~a~~~~-~~D~iivnd-~l---e~a~~~l~~ii~~~~~ 190 (198)
T 1lvg_A 131 EQRLRLRNTETEESLAKRLAAARTDMESSKEPG-LFDLVIIND-DL---DKAYATLKQALSEEIK 190 (198)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHTTGGGSTT-TCSEEEECS-SH---HHHHHHHHHHTHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhccC-CceEEEECC-CH---HHHHHHHHHHHHHHhh
Confidence 999999999999999999999988887764343 899999999 99 9999999999987653
No 16
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.78 E-value=1.6e-19 Score=139.82 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=89.2
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
+.+++|+||+++++++++++.|++|++|+|++|+.++++. ++ .+++|||.|||.++|+
T Consensus 75 ~~~~~n~yg~~~~~i~~~l~~g~~vil~id~~g~~~~~~~---~~-------------------~~~~ifi~~p~~~~l~ 132 (180)
T 1kgd_A 75 GSHEDAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTA---EF-------------------APFVVFIAAPTITPGL 132 (180)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHSST---TT-------------------CEEEEEEECCSCCTTS
T ss_pred EEEcCccccccHHHHHHHHHCCCeEEEEECHHHHHHHHHh---CC-------------------CcEEEEEECCCHHHHH
Confidence 5688999999999999999999999999999999999877 44 6899999999998776
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHh--hcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 83 TRLRGRGTETEDSLRRRLDLARRDM--SYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~~e~--~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
+| +++| +||..+..++ .+.+ .||++|+|| ++ +.|+++|.+++..
T Consensus 133 ~R--------~~~i-~r~~~~~~~~~~~~~~----~~d~~i~n~-~~---~~~~~~l~~~i~~ 178 (180)
T 1kgd_A 133 NE--------DESL-QRLQKESDILQRTYAH----YFDLTIINN-EI---DETIRHLEEAVEL 178 (180)
T ss_dssp CC--------SHHH-HHHHHHHHHHHHHHGG----GCSEEEECS-SH---HHHHHHHHHHHHH
T ss_pred hh--------HHHH-HHHHHHHHHHHHhhhC----CCcEEEECc-CH---HHHHHHHHHHHHH
Confidence 55 4678 6888887777 4565 899999999 99 9999999999865
No 17
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.74 E-value=5.8e-18 Score=134.79 Aligned_cols=117 Identities=23% Similarity=0.327 Sum_probs=92.3
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccC-CccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAM-AGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
..+.++.||++.+.++++++.|+.|++|++++|...+++. + + .+..||+.|||.++|
T Consensus 97 ~~~~~~~~~~~~~~i~~~~~~~~~vild~~~~g~~~~~~~---~~~-------------------~~~~v~v~~~~~~~l 154 (231)
T 3lnc_A 97 AEVFGNFYGVPRKNLEDNVDKGVSTLLVIDWQGAFKFMEM---MRE-------------------HVVSIFIMPPSMEEL 154 (231)
T ss_dssp EEETTEEEEEECTTHHHHHHHTCEEEEECCHHHHHHHHHH---SGG-------------------GEEEEEEECSCHHHH
T ss_pred hhhccccCCCCHHHHHHHHHcCCeEEEEcCHHHHHHHHHh---cCC-------------------CeEEEEEECCcHHHH
Confidence 4588999999999999999999999999999999999988 6 4 689999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQS 149 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~ 149 (166)
.+||..|++++++++++||..+..++.+.. .||++|+|+ ++ +++++++.+++........
T Consensus 155 ~~Rl~~R~~~~~~~i~~rl~~~~~~~~~~~----~~d~vI~n~-~~---e~~~~~l~~~i~~~~~~~~ 214 (231)
T 3lnc_A 155 RRRLCGRRADDSEVVEARLKGAAFEISHCE----AYDYVIVNE-DI---EETADRISNILRAEQMKTC 214 (231)
T ss_dssp HHC--------------CHHHHHHHHTTGG----GSSEEEECS-SH---HHHHHHHHHHHHHHHTBGG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHhhhc----CCeEEEECc-CH---HHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999887777665 899999999 99 9999999999987765443
No 18
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.57 E-value=3.1e-14 Score=113.89 Aligned_cols=117 Identities=21% Similarity=0.377 Sum_probs=103.8
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccC--CccchhhchhhhhhccCCCCceEEEEEeCCCHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAM--AGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEE 80 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~ 80 (166)
..+.++.||++.+.++++++.++.+++++++.|.++.|.+ + + ++..+|+.||++..
T Consensus 93 ~~~~~~~~g~~~~~i~~~l~~~~~~il~~~lsggq~qR~~---i~~~-------------------~~~~~ll~~~~~~~ 150 (218)
T 1z6g_A 93 DNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKS---THIK-------------------NALYIFIKPPSTDV 150 (218)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEEEECHHHHHHHTTC---SSCC-------------------SCEEEEEECSCHHH
T ss_pred hhcccccCCCcHHHHHHHHhCCCcEEEEecHHHHHHHHHH---hcCC-------------------CcEEEEEeCcCHHH
Confidence 4577899999999999999999999999999999999877 5 3 57899999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhh
Q psy18086 81 LETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEI 147 (166)
Q Consensus 81 Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~ 147 (166)
|.+|+..+++++++.|+++|..+..++.+.+ +. .||.+|+|+ ++ ++|++.+.+++..+..+
T Consensus 151 Lde~~~~~d~~~~~~i~~~l~~~~~~~~~~h-~~-~~d~iiv~~-~~---~ea~~~~~~ii~~~~~~ 211 (218)
T 1z6g_A 151 LLSRLLTRNTENQEQIQKRMEQLNIELHEAN-LL-NFNLSIIND-DL---TLTYQQLKNYLLNSYIH 211 (218)
T ss_dssp HHHHHHHTCCCCHHHHHHHHHHHHHHHHHHT-TS-CCSEEEECS-SH---HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc-cc-CCCEEEECC-CH---HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999877766553 23 899999999 99 99999999999876544
No 19
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.53 E-value=2.8e-14 Score=109.68 Aligned_cols=114 Identities=25% Similarity=0.432 Sum_probs=74.8
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHH
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELE 82 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le 82 (166)
..+.+++||++.+.++..++.|+.||+|++..+...+++. ++ .+++||+.||+.+++.
T Consensus 76 ~~~~~~~~g~~~~~i~~~l~~g~~vv~d~~~~~~~~~~~~---~~-------------------~~~~i~~~~~~~~~~~ 133 (207)
T 2j41_A 76 AEYVGNYYGTPVQYVKDTMDEGHDVFLEIEVEGAKQVRKK---FP-------------------DALFIFLAPPSLEHLR 133 (207)
T ss_dssp EEETTEEEEEEHHHHHHHHHTTCEEEEECCGGGHHHHHHH---CT-------------------TSEEEEEECCC-----
T ss_pred EeECCeecCCCHHHHHHHHHcCCeEEEEECHHHHHHHHHh---cC-------------------CeEEEEEECCCHHHHH
Confidence 4577889999999999999999999999999998888887 65 6789999999999999
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 83 TRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 83 ~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
+||..|+.++++++..|+.....++.+.. .+|++|+|+ ++ +++++++.+++.....
T Consensus 134 ~Rl~~R~~~~~~~~~~rl~~~~~~~~~~~----~~d~vI~n~-~~---e~~~~~i~~~l~~~~~ 189 (207)
T 2j41_A 134 ERLVGRGTESDEKIQSRINEARKEVEMMN----LYDYVVVND-EV---ELAKNRIQCIVEAEHL 189 (207)
T ss_dssp ----------------------CGGGGGG----GCSEEEECS-SH---HHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHhccc----cCCEEEECC-CH---HHHHHHHHHHHHHhhc
Confidence 99999988888899999988755555544 789999999 99 9999999999977653
No 20
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=98.78 E-value=1.6e-07 Score=73.40 Aligned_cols=110 Identities=29% Similarity=0.422 Sum_probs=93.6
Q ss_pred EEcc--ccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 4 IIYL--KSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 4 ~~~g--n~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
.+.+ ++||++++++++.++.+..++++++..|+..++.. ++ ..+.+++.+|+...|
T Consensus 90 ~~~~n~~~~g~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~---~~-------------------~~lS~l~~~p~~~~L 147 (207)
T 1znw_A 90 EIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKT---MP-------------------EAVTVFLAPPSWQDL 147 (207)
T ss_dssp EEGGGTEEEEEEHHHHHHHHHHTCCEEEECCHHHHHHHHHH---CT-------------------TSEEEEEECSCHHHH
T ss_pred hhcCchhhcCCcHHHHHHHHHcCCeEEEEeCHHHHHHHHHh---cC-------------------CcEEEEEECCCHHHH
Confidence 3566 78999999999999999999999999999998888 66 567799999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 82 ETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 82 e~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
.+++..++++.+..++.++.....++.... .+++++++. |+ +++......++.-
T Consensus 148 Dep~~~l~~~~d~~~~~~l~~~l~~l~~~~----g~tvi~vtH-dl---~~~~~~~d~i~~l 201 (207)
T 1znw_A 148 QARLIGRGTETADVIQRRLDTARIELAAQG----DFDKVVVNR-RL---ESACAELVSLLVG 201 (207)
T ss_dssp HHHHHTTSCSCHHHHHHHHHHHHHHHHGGG----GSSEEEECS-SH---HHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHhhhc----cCcEEEECC-CH---HHHHHHHHHHHHh
Confidence 999999998888889999988777776544 679999998 99 9988888887753
No 21
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=98.73 E-value=2.3e-09 Score=89.44 Aligned_cols=116 Identities=15% Similarity=0.075 Sum_probs=81.9
Q ss_pred ccccccC-cHHHHHHHHhcCCcEEEEeCHHHHH---HHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 6 YLKSYMV-NRAAVEAVINSGKTCVLDIEVQGVQ---QVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 6 ~gn~YGT-s~~~V~~v~~~Gk~~vldid~~Gv~---~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
.+++||+ ....++..+++|+.+|+|++.+|.. ++++. +. .. |+ .-.+++|+.||+...|
T Consensus 91 ~~~~~~~~~~~~v~~~l~~g~~vIld~~~~~~~~~~~~~~~---~~------------~~-g~-~~~~i~~~~p~~~~~l 153 (287)
T 1gvn_B 91 VTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATM---LQ------------AK-GY-ETKMYVMAVPKINSYL 153 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEECCCCCCSHHHHHHHHH---HH------------TT-TC-EEEEEEECCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHH---HH------------hC-CC-cEEEEEEECCHHHHHH
Confidence 4678998 4577888999999999999998866 44433 11 00 00 0236778888877665
Q ss_pred --HHHh---------hcCCC--CCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCC-------CCCHhHHHHHHHHHH
Q psy18086 82 --ETRL---------RGRGT--ETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFF-------LEYNSAAGEIFEHFG 141 (166)
Q Consensus 82 --e~RL---------~~Rgt--etee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~d-------l~~~e~a~~~l~~ii 141 (166)
.+|+ ..|++ ++.+.+..||..|..++.... .||++++||.+ + +.|...+.+++
T Consensus 154 ~~~~Rl~~R~~~g~l~~R~~~~e~~~~i~~rl~~a~~el~~~~----~~d~v~v~d~~g~~ly~~~---~~~~~~~~~ii 226 (287)
T 1gvn_B 154 GTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTG----LFSDIRLYNREGVKLYSSL---ETPSISPKETL 226 (287)
T ss_dssp HHHHHHHHHHHHCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHT----CCSCEEEECTTCCEEEETT---TCTTSCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCC----CCCeEEEEeCCCCEeeccC---CCCCcCHHHHH
Confidence 7886 45665 456778899999988887655 89999999832 4 45556677777
Q ss_pred Hhhh
Q psy18086 142 LKSS 145 (166)
Q Consensus 142 ~~~~ 145 (166)
.++.
T Consensus 227 ~~e~ 230 (287)
T 1gvn_B 227 EKEL 230 (287)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 22
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=98.38 E-value=1e-05 Score=58.86 Aligned_cols=99 Identities=15% Similarity=0.012 Sum_probs=68.9
Q ss_pred HHHHH--hcCCcEEEEe--CHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCC--
Q psy18086 17 VEAVI--NSGKTCVLDI--EVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGT-- 90 (166)
Q Consensus 17 V~~v~--~~Gk~~vldi--d~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt-- 90 (166)
+...+ ..++.+|+|- .+.-+..+++. ++ ....+||+.+| .+++.+|+..|+.
T Consensus 69 ~~~~l~~~~~~~vi~dg~~~~~~~~~l~~~---~~------------------~~~~~i~l~~~-~~~~~~R~~~R~~~~ 126 (179)
T 3lw7_A 69 CVEELGTSNHDLVVFDGVRSLAEVEEFKRL---LG------------------DSVYIVAVHSP-PKIRYKRMIERLRSD 126 (179)
T ss_dssp HHHHHCSCCCSCEEEECCCCHHHHHHHHHH---HC------------------SCEEEEEEECC-HHHHHHHHHTCC---
T ss_pred HHHHHHhcCCCeEEEeCCCCHHHHHHHHHH---hC------------------CCcEEEEEECC-HHHHHHHHHhccCCC
Confidence 44455 6788899884 33344555555 21 13578888875 8999999999986
Q ss_pred --CCHHHHHHHHHHHHH--HhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 91 --ETEDSLRRRLDLARR--DMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 91 --etee~I~~Rl~~A~~--e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
.+.+++..|+..... ...+.. ..|++|.|++++ ++..+++.+++...
T Consensus 127 ~~~~~~~~~~r~~~~~~~~~~~~~~----~ad~vId~~~~~---~~~~~~i~~~l~~~ 177 (179)
T 3lw7_A 127 DSKEISELIRRDREELKLGIGEVIA----MADYIITNDSNY---EEFKRRCEEVTDRV 177 (179)
T ss_dssp -CCCHHHHHHHHHHHHHHTHHHHHH----TCSEEEECCSCH---HHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccChHhHHH----hCCEEEECCCCH---HHHHHHHHHHHHHH
Confidence 688889888854322 112333 679999999888 99999999988653
No 23
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=97.73 E-value=0.00015 Score=55.96 Aligned_cols=97 Identities=16% Similarity=0.108 Sum_probs=66.2
Q ss_pred cCCcEEEE---eCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCce-EEEEEeCCCHHHHHHHhhcC----------
Q psy18086 23 SGKTCVLD---IEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGA-VYVFVKPPSIEELETRLRGR---------- 88 (166)
Q Consensus 23 ~Gk~~vld---id~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~IFI~PPS~e~Le~RL~~R---------- 88 (166)
.|+.+|+| .....+..+.+. +. ..| ..| .+||+.+| .+++.+||.+|
T Consensus 77 ~~~~~ildg~p~~~~~~~~l~~~---~~------------~~~---~~~d~vi~l~~~-~e~~~~Rl~~R~~~~~~g~~y 137 (216)
T 3fb4_A 77 CQKGFLLDGFPRTVAQADALDSL---LT------------DLG---KKLDYVLNIKVE-QEELMKRLTGRWICKTCGATY 137 (216)
T ss_dssp GTTCEEEESCCCSHHHHHHHHHH---HH------------HTT---CCCSEEEEEECC-HHHHHHHHHSEEEETTTCCEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHHH---HH------------hcC---CCCCEEEEEECC-HHHHHHHHHcCCCCCccCCcc
Confidence 37889998 666666666654 11 000 023 67888876 79999999988
Q ss_pred -----------------------CCCCHHHHHHHHHHHHHHhh----cCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHH
Q psy18086 89 -----------------------GTETEDSLRRRLDLARRDMS----YGKDSLRSYGIISELAFFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 89 -----------------------gtetee~I~~Rl~~A~~e~~----~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii 141 (166)
..++++.++.|+.....+.. +....+ ..++|.|++++ ++.++++.+++
T Consensus 138 ~~~~~pp~~~~~~~~~~~~l~~r~~d~~e~i~~rl~~~~~~~~~~~~~~~~~~--~~~~id~~~~~---~~v~~~i~~~l 212 (216)
T 3fb4_A 138 HTIFNPPAVEGICDKDGGELYQRIDDKPETVKNRLDVNMKQTQPLLDFYSQKG--VLKDIDGQQDI---KKVFVDINDLL 212 (216)
T ss_dssp ETTTBCCSSTTBCTTTCCBEECCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEEECSSCH---HHHHHHHHHHH
T ss_pred ccccCCCCcccccccccCccccCCCCCHHHHHHHHHHHHHhHHHHHHHHHcCC--cEEEEECCCCH---HHHHHHHHHHH
Confidence 45789999999998765432 211111 24677877789 99999999888
Q ss_pred Hh
Q psy18086 142 LK 143 (166)
Q Consensus 142 ~~ 143 (166)
..
T Consensus 213 ~~ 214 (216)
T 3fb4_A 213 GG 214 (216)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 24
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=97.71 E-value=0.00025 Score=54.79 Aligned_cols=97 Identities=13% Similarity=0.182 Sum_probs=65.6
Q ss_pred cCCcEEEE---eCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCce-EEEEEeCCCHHHHHHHhhcC----------
Q psy18086 23 SGKTCVLD---IEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGA-VYVFVKPPSIEELETRLRGR---------- 88 (166)
Q Consensus 23 ~Gk~~vld---id~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~IFI~PPS~e~Le~RL~~R---------- 88 (166)
.|+.+++| .....+..+.+. +. ..| ..| .+|++.+| .+++.+||.+|
T Consensus 77 ~~~~~ildg~p~~~~~~~~~~~~---~~------------~~~---~~~d~vi~l~~~-~e~~~~Rl~~R~~~~~~g~~y 137 (216)
T 3dl0_A 77 CERGFLLDGFPRTVAQAEALEEI---LE------------EMG---KPIDYVINIQVD-KDVLMERLTGRRICSVCGTTY 137 (216)
T ss_dssp GTTCEEEESCCCSHHHHHHHHHH---HH------------HTT---CCCSEEEEEECC-GGGHHHHHHTEEEETTTCCEE
T ss_pred ccCCEEEeCCCCCHHHHHHHHHH---HH------------HcC---CCCCEEEEEECC-HHHHHHHHHCCCcCCccCCcc
Confidence 37889999 666666666654 11 000 023 56777775 68999999988
Q ss_pred -----------------------CCCCHHHHHHHHHHHHHHhh----cCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHH
Q psy18086 89 -----------------------GTETEDSLRRRLDLARRDMS----YGKDSLRSYGIISELAFFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 89 -----------------------gtetee~I~~Rl~~A~~e~~----~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii 141 (166)
..++++.+++|+.....+.. +....+ ..++|.|++++ ++.++++.+++
T Consensus 138 ~~~~~pp~~~~~~~~~~~~l~~r~~d~~e~i~~rl~~~~~~~~~~~~~~~~~~--~~~~id~~~~~---~~v~~~i~~~l 212 (216)
T 3dl0_A 138 HLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKG--YLVNVNGQQDI---QDVYADLKVLL 212 (216)
T ss_dssp ETTTBCCSSTTBCTTTCCBEECCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEECSSCH---HHHHHHHHHHH
T ss_pred ccccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC--CEEEEECCCCH---HHHHHHHHHHH
Confidence 56899999999998765432 211011 23667777789 99999999988
Q ss_pred Hh
Q psy18086 142 LK 143 (166)
Q Consensus 142 ~~ 143 (166)
..
T Consensus 213 ~~ 214 (216)
T 3dl0_A 213 GG 214 (216)
T ss_dssp GG
T ss_pred Hh
Confidence 64
No 25
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=97.61 E-value=0.00015 Score=56.59 Aligned_cols=77 Identities=17% Similarity=0.087 Sum_probs=53.1
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhc-CCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSY-GKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~-~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
..+.+|+.||+.+++.+||..|+.++++.++.|+.....+... ..... ...++|.++.++ ++.++++.+++....
T Consensus 137 ~~~~~~~~pp~~~~~~~~l~~r~~d~~~~i~~Rl~~~~~~~~~l~~~y~-~~~~~Id~~~~~---~ev~~~I~~~l~~~l 212 (222)
T 1zak_A 137 KIYHLKYSPPENEEIASRLTQRFDDTEEKVKLRLETYYQNIESLLSTYE-NIIVKVQGDATV---DAVFAKIDELLGSIL 212 (222)
T ss_dssp CEEESSSSCCCSSGGGGGCBCCTTCCTTHHHHHHHHHHHHHHHHHHTTC-CCEEEEECSSCH---HHHHHHHHHHHHHHH
T ss_pred CccccccCCCcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcEEEEECCCCH---HHHHHHHHHHHHhhc
Confidence 4577778888877777788888778889999999877654321 11000 224566666678 999999999887654
Q ss_pred hh
Q psy18086 146 EI 147 (166)
Q Consensus 146 ~~ 147 (166)
..
T Consensus 213 ~~ 214 (222)
T 1zak_A 213 EK 214 (222)
T ss_dssp HH
T ss_pred cc
Confidence 33
No 26
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=97.60 E-value=0.00086 Score=50.45 Aligned_cols=66 Identities=11% Similarity=-0.020 Sum_probs=45.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCC------CHHHHHHHHHHHHHHhh-----cCCCCCCccc--EEEEcCCCCCCHhHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTE------TEDSLRRRLDLARRDMS-----YGKDSLRSYG--IISELAFFLEYNSAAGE 135 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgte------tee~I~~Rl~~A~~e~~-----~~~~~~~~fD--~vIvNd~dl~~~e~a~~ 135 (166)
.+||+.+| .+++.+|+..|+.. +++++++|+.....+.. |. ..+ ++|.|+.++ ++.++
T Consensus 118 ~~i~l~~~-~~~~~~R~~~R~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~id~~~~~---e~v~~ 188 (199)
T 2bwj_A 118 LVICMDCS-ADTMTNRLLQMSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYE-----TKTQLHKINAEGTP---EDVFL 188 (199)
T ss_dssp EEEEEECC-HHHHHHHHHHTCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSEEEEEETTSCH---HHHHH
T ss_pred EEEEEECC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----hcCCEEEEECCCCH---HHHHH
Confidence 68999986 89999999988742 34678888765433221 22 123 556666678 89999
Q ss_pred HHHHHHHh
Q psy18086 136 IFEHFGLK 143 (166)
Q Consensus 136 ~l~~ii~~ 143 (166)
++.+++..
T Consensus 189 ~i~~~l~~ 196 (199)
T 2bwj_A 189 QLCTAIDS 196 (199)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888754
No 27
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=97.58 E-value=0.00059 Score=51.26 Aligned_cols=99 Identities=20% Similarity=0.229 Sum_probs=63.0
Q ss_pred HHHHHHHhcCCcEEEEeCHHHHHHH---HHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCC-
Q psy18086 15 AAVEAVINSGKTCVLDIEVQGVQQV---KRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGT- 90 (166)
Q Consensus 15 ~~V~~v~~~Gk~~vldid~~Gv~~l---k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt- 90 (166)
+.+...++.|+.+|+|.-+.+..++ ... ++ ..-.+||+.+| .+++.+|+.+|+.
T Consensus 79 ~~i~~~~~~~~~vi~d~~~~~~~~~~~~~~~---~~------------------~~~~vi~l~~~-~e~~~~R~~~R~~~ 136 (196)
T 2c95_A 79 DAMVAKVNTSKGFLIDGYPREVQQGEEFERR---IG------------------QPTLLLYVDAG-PETMTQRLLKRGET 136 (196)
T ss_dssp HHHHHHTTTCSCEEEESCCCSHHHHHHHHHH---TC------------------CCSEEEEEECC-HHHHHHHHHHHHTS
T ss_pred HHHHhccccCCcEEEeCCCCCHHHHHHHHHh---cC------------------CCCEEEEEECC-HHHHHHHHHccCCc
Confidence 4445555678899998543333333 222 21 02267888875 8999999987752
Q ss_pred -----CCHHHHHHHHHHHHHHhh-----cCCCCCCccc--EEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 91 -----ETEDSLRRRLDLARRDMS-----YGKDSLRSYG--IISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 91 -----etee~I~~Rl~~A~~e~~-----~~~~~~~~fD--~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
++++++++|+.....+.. |. ..| ++|.|+.++ +++++++.+++..
T Consensus 137 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Id~~~~~---e~v~~~i~~~l~~ 193 (196)
T 2c95_A 137 SGRVDDNEETIKKRLETYYKATEPVIAFYE-----KRGIVRKVNAEGSV---DSVFSQVCTHLDA 193 (196)
T ss_dssp SSCGGGSHHHHHHHHHHHHHHTHHHHHHHH-----HHTCEEEEECCSCH---HHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----hcCcEEEEECCCCH---HHHHHHHHHHHHH
Confidence 467888889877644321 22 123 356666688 9999999888864
No 28
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=97.54 E-value=0.00034 Score=53.67 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=64.3
Q ss_pred HHHHHHHhcCCcEEEEe---CHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCCC
Q psy18086 15 AAVEAVINSGKTCVLDI---EVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGTE 91 (166)
Q Consensus 15 ~~V~~v~~~Gk~~vldi---d~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgte 91 (166)
..+.+.+..|..+|+|. .......++.. .+ ....+||+.+| .+++.+|+.+|+..
T Consensus 77 ~~l~~~~~~~~~vivd~~~~~~~~~~~l~~~---~~------------------~~~~vi~l~~~-~e~~~~Rl~~R~~~ 134 (202)
T 3t61_A 77 AAIGERLASREPVVVSCSALKRSYRDKLRES---AP------------------GGLAFVFLHGS-ESVLAERMHHRTGH 134 (202)
T ss_dssp HHHHHHHTSSSCCEEECCCCSHHHHHHHHHT---ST------------------TCCEEEEEECC-HHHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCEEEECCCCCHHHHHHHHHh---cC------------------CCeEEEEEeCC-HHHHHHHHHHhhcc
Confidence 35566678899999984 35555556555 22 12467888875 99999999988642
Q ss_pred --CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 92 --TEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 92 --tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.++.++..+... ... +.. ..|++|.|+.++ +++.+++.+++.+..
T Consensus 135 ~~~~~~~~~~~~~~-~~~-~~~----~~~~~Id~~~~~---~e~~~~I~~~l~~~~ 181 (202)
T 3t61_A 135 FMPSSLLQTQLETL-EDP-RGE----VRTVAVDVAQPL---AEIVREALAGLARLA 181 (202)
T ss_dssp CCCHHHHHHHHHHC-CCC-TTS----TTEEEEESSSCH---HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhc-CCC-CCC----CCeEEEeCCCCH---HHHHHHHHHHHHHhh
Confidence 333333332221 111 111 357888888788 999999999987653
No 29
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=97.49 E-value=0.00015 Score=55.71 Aligned_cols=70 Identities=9% Similarity=-0.073 Sum_probs=47.4
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHh----HHHHHHHHHHHhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNS----AAGEIFEHFGLKS 144 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e----~a~~~l~~ii~~~ 144 (166)
.+|||.+| .+++.+|+..|...+++++..|+........... ..|++|.|++++ + +..+++.+++...
T Consensus 126 ~vi~l~~~-~e~~~~Rl~~R~~~~~e~~~~r~~~q~~~~~~~~----~ad~vIdn~~~~---~~~~~~~~~~i~~~~~~~ 197 (206)
T 1jjv_A 126 RILVVDVS-PQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLK----WADDVINNDAEL---AQNLPHLQQKVLELHQFY 197 (206)
T ss_dssp EEEEEECC-HHHHHHHHC-----CHHHHHHHHHHSCCHHHHHH----HCSEEEECCSCH---HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHHcCCCCHHHHHHHHHhcCChHHHHH----hCCEEEECCCCc---cccHHHHHHHHHHHHHHH
Confidence 68899886 8999999998855688899988875211111111 458999999788 8 8888888887655
Q ss_pred hh
Q psy18086 145 SE 146 (166)
Q Consensus 145 ~~ 146 (166)
..
T Consensus 198 ~~ 199 (206)
T 1jjv_A 198 LQ 199 (206)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 30
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=97.47 E-value=0.0022 Score=48.73 Aligned_cols=71 Identities=7% Similarity=-0.007 Sum_probs=42.3
Q ss_pred EEEEEeCCCHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRG-TETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg-tetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
.+||+.+| .+++.+|+..|. +...+++..|+...-.++.... + .-.++|.|++++ ++..+++.+++.....
T Consensus 132 ~vi~l~~~-~e~~~~Rl~r~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~Id~~~~~---e~~~~~i~~~l~~~l~ 203 (215)
T 1nn5_A 132 LVLFLQLQ-LADAAKRGAFGHERYENGAFQERALRCFHQLMKDT-T--LNWKMVDASKSI---EAVHEDIRVLSEDAIA 203 (215)
T ss_dssp EEEEEECC-HHHHHHC-----CTTCSHHHHHHHHHHHHHHTTCT-T--SCEEEEETTSCH---HHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHhccCccccchHHHHHHHHHHHHHHHHhC-C--CCEEEEECCCCH---HHHHHHHHHHHHHHHh
Confidence 57888876 889999996441 2223456667665433332211 1 123667766688 9999999998876544
No 31
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=97.39 E-value=0.00044 Score=51.47 Aligned_cols=99 Identities=12% Similarity=0.086 Sum_probs=59.0
Q ss_pred ccCcHHHHHHHHhcCCcEEEEeCH-HH---HHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHh
Q psy18086 10 YMVNRAAVEAVINSGKTCVLDIEV-QG---VQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRL 85 (166)
Q Consensus 10 YGTs~~~V~~v~~~Gk~~vldid~-~G---v~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL 85 (166)
|+...+.++..++.|..+|++... ++ ...+++. +++ ...++||+.+ |.+++.+|+
T Consensus 72 ~~~~~~~~~~~~~~g~~vi~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~v~l~~-~~e~l~~R~ 130 (178)
T 1qhx_A 72 EGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSF---VGD-----------------LDVLWVGVRC-DGAVAEGRE 130 (178)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTTHHHHHHHHHH---HTT-----------------CCEEEEEEEC-CHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEEeccccChHHHHHHHHH---hcC-----------------CcEEEEEEEC-CHHHHHHHH
Confidence 333344567778899999999865 23 2345544 321 0246788887 499999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCC-CCCCHhHHHHHHHHH
Q psy18086 86 RGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAF-FLEYNSAAGEIFEHF 140 (166)
Q Consensus 86 ~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~i 140 (166)
++|+..... +. .+..+.-+. +. .+|++|.+++ ++ +++.+++.+.
T Consensus 131 ~~r~~~~~~-~~----~~~~~~~~~--~~-~~d~~idt~~~~~---~~~~~~I~~~ 175 (178)
T 1qhx_A 131 TARGDRVAG-MA----AKQAYVVHE--GV-EYDVEVDTTHKES---IECAWAIAAH 175 (178)
T ss_dssp HHTSSSCTT-HH----HHHTTGGGT--TC-CCSEEEETTSSCH---HHHHHHHHTT
T ss_pred HhhCCcccc-hh----hhhchhhcc--CC-CCcEEEECCCCCH---HHHHHHHHHH
Confidence 998754433 11 111111111 22 5899999873 45 6666666543
No 32
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=97.35 E-value=0.00012 Score=60.53 Aligned_cols=68 Identities=13% Similarity=-0.011 Sum_probs=51.5
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
.+|||.+| .+++.+|+.+|...+++++..|+........+.. .+|++|.|++++ +++.+++.+++...
T Consensus 202 ~vI~l~a~-~ev~~~Rl~~R~g~s~e~~~~ri~~q~~~~~~~~----~AD~vIdn~~s~---eel~~~I~~~l~~l 269 (281)
T 2f6r_A 202 EVWTVVIP-ETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLVE----QSNVVLSTLWES---HVTQSQVEKAWNLL 269 (281)
T ss_dssp EEEEEECC-HHHHHHHHHHHHCCCHHHHHHHHHTSCCHHHHHH----TCSEEEECSSCH---HHHHHHHHHHHHHH
T ss_pred EEEEEcCC-HHHHHHHHHHcCCCCHHHHHHHHHHcCChHhhHh----hCCEEEECCCCH---HHHHHHHHHHHHHH
Confidence 68999986 8999999988855688888888765411112222 568999999888 99999999988654
No 33
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=97.35 E-value=0.00082 Score=51.74 Aligned_cols=68 Identities=15% Similarity=0.089 Sum_probs=45.1
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCC--HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTET--EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtet--ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
...+||+.+| .+++.+|+..|+... .+.++..+... +--|.. ..|++|.|++++ +++.+++.+++...
T Consensus 125 ~~~vv~l~~~-~e~l~~Rl~~R~~~~~~~~~l~~~~~~~--~~~~~~----~~~~~Id~~~~~---~e~~~~I~~~l~~~ 194 (200)
T 4eun_A 125 SVDFLHLDGP-AEVIKGRMSKREGHFMPASLLQSQLATL--EALEPD----ESGIVLDLRQPP---EQLIERALTWLDIA 194 (200)
T ss_dssp CCEEEEEECC-HHHHHHHHTTCSCCSSCGGGHHHHHHHC--CCCCTT----SCEEEEETTSCH---HHHHHHHHHHHCCC
T ss_pred ceEEEEEeCC-HHHHHHHHHhcccCCCCHHHHHHHHHHh--CCCCCC----CCeEEEECCCCH---HHHHHHHHHHHHhc
Confidence 4578899986 999999999886432 22333222111 111222 468999988788 99999999888643
No 34
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=97.33 E-value=0.00056 Score=55.54 Aligned_cols=69 Identities=9% Similarity=-0.035 Sum_probs=51.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHhhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+|+|..| .++..+||.+|...|++++..|+..--..-.... ..|+||.|+ +++ +...+++..++....
T Consensus 134 ~vi~V~ap-~e~r~~Rl~~Rdg~s~eea~~ri~~Q~~~eek~~----~AD~VIdN~~gsl---e~l~~qV~~l~~~~~ 203 (210)
T 4i1u_A 134 RVLVVDCP-VDTQIARVMQRNGFTREQVEAIIARQATREARLA----AADDVIVNDAATP---DALAVQVDALHQRYL 203 (210)
T ss_dssp EEEEEECC-HHHHHHHHHHHHCCCHHHHHHHHHHSCCHHHHHH----TCSEEEECSSCCH---HHHHHHHHHHHHHHH
T ss_pred eEEEEECC-HHHHHHHHHhcCCCCHHHHHHHHHHcCChHHHHH----hCCEEEECCCCCH---HHHHHHHHHHHHHHH
Confidence 46788876 7888899999855799999998864211111112 569999999 899 999999999887654
No 35
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=97.27 E-value=0.00037 Score=52.44 Aligned_cols=69 Identities=4% Similarity=-0.076 Sum_probs=44.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
.+||+.+| .+++.+|+.+|+..+++++..|+...-.++.... + ...++|.|++++ ++..+++.+++...
T Consensus 124 ~vi~l~~~-~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~Id~~~~~---e~~~~~i~~~l~~~ 192 (197)
T 2z0h_A 124 LTFYIDVD-VETALKRKGELNRFEKREFLERVREGYLVLAREH-P--ERIVVLDGKRSI---EEIHRDVVREVKRR 192 (197)
T ss_dssp EEEEEECC-HHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHC-T--TTEEEEETTSCH---HHHHHHHHHHTTCC
T ss_pred EEEEEeCC-HHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhC-C--CCEEEEeCCCCH---HHHHHHHHHHHHHH
Confidence 56777775 7999999999876555577777766544432211 1 224567777788 99999998888654
No 36
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=97.26 E-value=0.0033 Score=46.73 Aligned_cols=67 Identities=10% Similarity=0.135 Sum_probs=43.2
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCC--HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTET--EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtet--ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~ 142 (166)
...+||+..| .+++.+|+..|+..+ .+-++..+. ++.... .....|++|.|+.++ ++..+++.+++.
T Consensus 104 ~~~vv~l~~~-~e~~~~R~~~R~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~Id~~~~~---~~~~~~i~~~l~ 172 (175)
T 1knq_A 104 NLSFIYLKGD-FDVIESRLKARKGHFFKTQMLVTQFE----TLQEPG-ADETDVLVVDIDQPL---EGVVASTIEVIK 172 (175)
T ss_dssp TEEEEEEECC-HHHHHHHHHTSTTCCCCHHHHHHHHH----HCCCCC-TTCTTEEEEECSSCH---HHHHHHHHHHHH
T ss_pred CEEEEEEECC-HHHHHHHHHhccCCCCchHHHHHHHH----hhhCcc-cCCCCeEEEeCCCCH---HHHHHHHHHHHh
Confidence 4578999986 899999999886432 333332221 111100 011468999988788 888888888774
No 37
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=97.24 E-value=0.00026 Score=54.89 Aligned_cols=69 Identities=10% Similarity=-0.086 Sum_probs=51.5
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+|||.+| .+++.+|+..|...+++++..|+........+.. .+|++|.|++++ ++..+++.+++....
T Consensus 128 ~vi~l~~~-~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~~~~----~ad~vId~~~~~---~~~~~~I~~~l~~~~ 196 (218)
T 1vht_A 128 RVLVVDVS-PETQLKRTMQRDDVTREHVEQILAAQATREARLA----VADDVIDNNGAP---DAIASDVARLHAHYL 196 (218)
T ss_dssp EEEEEECC-HHHHHHHHHHHHTCCHHHHHHHHHHSCCHHHHHH----HCSEEEECSSCT---TSHHHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHHcCCCCHHHHHHHHHhcCChHHHHH----hCCEEEECCCCH---HHHHHHHHHHHHHHH
Confidence 78999975 8999999988865688888888775211122222 568999998888 888888888886553
No 38
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=97.24 E-value=0.015 Score=42.25 Aligned_cols=71 Identities=13% Similarity=-0.041 Sum_probs=44.1
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHhhcCCCCCCcccEEEEcCC-CCCCHhHHHHHHHHHHHhhh
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETE-DSLRRRLDLARRDMSYGKDSLRSYGIISELAF-FLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtete-e~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~ii~~~~ 145 (166)
..+||+.+| .+++.+|+.+|+++.+ .+...++..+-.+..... . ..+++|.+++ ++ +++.+++.+.+.+..
T Consensus 96 ~~~i~l~~~-~e~~~~R~~~r~r~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~id~~~~~~---~ev~~~I~~~~~~~~ 168 (173)
T 3kb2_A 96 AKVVYLHAD-PSVIKKRLRVRGDEYIEGKDIDSILELYREVMSNA--G-LHTYSWDTGQWSS---DEIAKDIIFLVELEH 168 (173)
T ss_dssp EEEEEEECC-HHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTC--S-SCEEEEETTTSCH---HHHHHHHHHHHHHGG
T ss_pred CEEEEEeCC-HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhhc--C-CCEEEEECCCCCH---HHHHHHHHHHHhCCC
Confidence 467888864 9999999988654322 234444444433332111 1 3467777763 77 888888888877654
No 39
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=97.24 E-value=0.0013 Score=48.50 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=48.9
Q ss_pred HHHHHHHH---hcCCcEEEEeCHHH---HHHHHHh---hccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHH
Q psy18086 14 RAAVEAVI---NSGKTCVLDIEVQG---VQQVKRA---GGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETR 84 (166)
Q Consensus 14 ~~~V~~v~---~~Gk~~vldid~~G---v~~lk~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~R 84 (166)
.+.++..+ .+|+.+|+|....+ ...+++. .+. ...+||+.+ +.+++.+|
T Consensus 65 ~~~~~~~l~~~~~g~~vi~d~~~~~~~~~~~l~~~~~~~~~---------------------~~~~i~l~~-~~~~~~~R 122 (181)
T 1ly1_A 65 FDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGW---------------------KVEHKVFDV-PWTELVKR 122 (181)
T ss_dssp HHHHHHHHTSCSSCCEEEECSCCCSHHHHHHHHHHHHHHTC---------------------EEEEEECCC-CHHHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHHHHHHHcCC---------------------CEEEEEEeC-CHHHHHHH
Confidence 34566777 88999999865432 2223322 121 347888886 48999999
Q ss_pred hhcCC--CCCHHHHHHHHHHHHHH
Q psy18086 85 LRGRG--TETEDSLRRRLDLARRD 106 (166)
Q Consensus 85 L~~Rg--tetee~I~~Rl~~A~~e 106 (166)
+.+|+ ..+++.++++++..+..
T Consensus 123 ~~~R~~~~~~~~~i~~~~~~~~~~ 146 (181)
T 1ly1_A 123 NSKRGTKAVPIDVLRSMYKSMREY 146 (181)
T ss_dssp HTTCGGGCCCHHHHHHHHHHHHHH
T ss_pred HhccccCCCCHHHHHHHHHHhhcc
Confidence 99987 56788899988877554
No 40
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=97.18 E-value=0.0053 Score=45.48 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=46.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC------CCHHHHHHHHHHHHHHh----hcCCCCCCccc--EEEEcCCCCCCHhHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT------ETEDSLRRRLDLARRDM----SYGKDSLRSYG--IISELAFFLEYNSAAGEI 136 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt------etee~I~~Rl~~A~~e~----~~~~~~~~~fD--~vIvNd~dl~~~e~a~~~ 136 (166)
++||+.+| .+++.+|+..|+. ++++++++|+.....+. .+.. .+| ++|.|++++ ++..++
T Consensus 113 ~vi~l~~~-~e~~~~R~~~R~~~~~r~~~~~~~~~~ri~~~~~~~~~~~~~~~----~~~~~~~id~~~~~---~~~~~~ 184 (194)
T 1qf9_A 113 FVLFFDCP-EEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYN----KFDKVKIIPANRDV---NEVYND 184 (194)
T ss_dssp EEEEEECC-HHHHHHHHHHHHTTSCCTTCSHHHHHHHHHHHHHTHHHHHHHHH----HTTCEEEEECSSCH---HHHHHH
T ss_pred EEEEEECC-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHHH----hCCCEEEEECCCCH---HHHHHH
Confidence 57777775 8999999987753 34788999988653221 1111 245 667777788 999999
Q ss_pred HHHHHHh
Q psy18086 137 FEHFGLK 143 (166)
Q Consensus 137 l~~ii~~ 143 (166)
+.+++..
T Consensus 185 i~~~l~~ 191 (194)
T 1qf9_A 185 VENLFKS 191 (194)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888864
No 41
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=97.15 E-value=0.00059 Score=54.78 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=59.9
Q ss_pred CCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCC-------------
Q psy18086 24 GKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGT------------- 90 (166)
Q Consensus 24 Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt------------- 90 (166)
++.+|+|..+.++.+.+....++ ...| .... .+|++..| .+++.+||.+|++
T Consensus 107 ~~~~ildg~p~~~~q~~~l~~~l------------~~~~-~~~d-~vi~l~~p-~e~~~~Rl~~R~~~~~~g~~y~~~~~ 171 (243)
T 3tlx_A 107 KKGFILDGYPRNVKQAEDLNKLL------------QKNQ-TKLD-GVFYFNVP-DEVLVNRISGRLIHKPSGRIYHKIFN 171 (243)
T ss_dssp SSEEEEESCCCSHHHHHHHHHHH------------HHTT-CCCC-EEEEEECC-HHHHHHHHHTEEEETTTTEEEETTTB
T ss_pred cCCEEecCCCCcHHHHHHHHHHH------------HHcC-CCCc-eEEEEeCC-HHHHHHHHHcCCCCcccCcccccccC
Confidence 67788888777766655421000 0011 1113 34555554 5999999998752
Q ss_pred --------------------CCHHHHHHHHHHHHHHhh----cCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHH
Q psy18086 91 --------------------ETEDSLRRRLDLARRDMS----YGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 91 --------------------etee~I~~Rl~~A~~e~~----~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~ 142 (166)
++++.+++||..+..+.. |....+ .-+.|.++.++ ++.++++.+++.
T Consensus 172 pp~~~~~~~~~~~~l~~r~dd~~e~i~~Rl~~~~~~~~~l~~~y~~~~--~~~~id~~~~~---~~v~~~i~~~l~ 242 (243)
T 3tlx_A 172 PPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLISYYKNKN--LLINLDATQPA---NDLEKKISQHID 242 (243)
T ss_dssp CCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHHTTHHHHHHHHTT--CEEEEETTSCH---HHHHHHHHHHHH
T ss_pred CCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEECCCCH---HHHHHHHHHHHc
Confidence 689999999999877642 211111 11334445578 888888888764
No 42
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=97.12 E-value=0.013 Score=44.06 Aligned_cols=67 Identities=7% Similarity=-0.020 Sum_probs=44.2
Q ss_pred EEEEEeCCCHHHHHHHhh-cCCC--C---------------CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCH
Q psy18086 69 VYVFVKPPSIEELETRLR-GRGT--E---------------TEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYN 130 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~-~Rgt--e---------------tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~ 130 (166)
.+||+..| .+++.+|+. +|+. . +++++..|+.....+. ... ..+++|.++.++
T Consensus 124 ~vi~l~~~-~e~~~~Rl~~~R~~~~~~~~g~~~~~~~d~~e~~~~~~~r~~~~~~~~--~~~---~~~~~Id~~~~~--- 194 (213)
T 2plr_A 124 ITFYIRVS-PDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLITEVYDKL--VKD---ENFIVIDGTKTP--- 194 (213)
T ss_dssp EEEEEECC-HHHHHHHHHHTTCCCCTTTTTTTTCTTSCHHHHHHHHHHHHHHHHHHH--TTT---TTCEEEETTSCH---
T ss_pred EEEEEeCC-HHHHHHHHhcccccccccccccccccccchhhhHHHHHHHHHHHHHHH--Hhh---CCEEEEECCCCH---
Confidence 57888875 799999998 7862 1 1135666666543333 110 235677777778
Q ss_pred hHHHHHHHHHHHhh
Q psy18086 131 SAAGEIFEHFGLKS 144 (166)
Q Consensus 131 e~a~~~l~~ii~~~ 144 (166)
++..+++.+++...
T Consensus 195 e~v~~~I~~~l~~~ 208 (213)
T 2plr_A 195 KEIQIQIRKFVGEL 208 (213)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88999998888654
No 43
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=97.11 E-value=0.0025 Score=48.64 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=47.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC--CCHHHHHHHHHHHHHHh----hcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT--ETEDSLRRRLDLARRDM----SYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt--etee~I~~Rl~~A~~e~----~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~ 142 (166)
.+||+..| .+++.+|+.+|+. ++++.+++|+.....+. .+.. ..+++|.|+.++ ++..+++.+++.
T Consensus 129 ~vi~l~~~-~e~~~~Rl~~R~r~~~~~e~~~~r~~~~~~~~~~~~~~~~----~~~~~Id~~~~~---eev~~~I~~~l~ 200 (201)
T 2cdn_A 129 AVLEFRVS-EEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYR----DQLKTVDAVGTM---DEVFARALRALG 200 (201)
T ss_dssp EEEEEECC-HHHHHHHHHHHCCTTCSHHHHHHHHHHHHHHTTTHHHHTT----TTEEEEECCSCH---HHHHHHHHHHTT
T ss_pred EEEEEECC-HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhHHHHHHhc----CcEEEEeCCCCH---HHHHHHHHHHHc
Confidence 67888875 7899999988764 57888999987665432 2222 457788887678 888888887663
No 44
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=97.10 E-value=0.0057 Score=46.50 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=45.9
Q ss_pred EEEEEeCCCHHHHHHHhhcCC------CCCHHHHHHHHHHHHHHh----hcCCCCCCcccE--EEEcCCCCCCHhHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRG------TETEDSLRRRLDLARRDM----SYGKDSLRSYGI--ISELAFFLEYNSAAGEI 136 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg------tetee~I~~Rl~~A~~e~----~~~~~~~~~fD~--vIvNd~dl~~~e~a~~~ 136 (166)
++||+.+| .+++.+|+.+|+ .++.+.+++|+....... .+.. ..|. +|.|++++ ++.+++
T Consensus 123 ~~i~l~~~-~e~~~~Rl~~R~~~~~~~~~~~e~~~~r~~~~~~~~~~~~~~~~----~~~~vi~id~~~~~---e~v~~~ 194 (203)
T 1ukz_A 123 FILFFDCP-EDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE----TKSKVVRVRCDRSV---EDVYKD 194 (203)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHHCCTTCSHHHHHHHHHHHHHTTHHHHHHHH----TTTCEEEEECSSCH---HHHHHH
T ss_pred EEEEEECC-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHH----hcCcEEEEECCCCH---HHHHHH
Confidence 68889886 789999987764 357888988877543221 1111 2343 35676688 999999
Q ss_pred HHHHHHh
Q psy18086 137 FEHFGLK 143 (166)
Q Consensus 137 l~~ii~~ 143 (166)
+.+++..
T Consensus 195 i~~~l~~ 201 (203)
T 1ukz_A 195 VQDAIRD 201 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9888754
No 45
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=97.04 E-value=0.015 Score=43.18 Aligned_cols=66 Identities=5% Similarity=-0.005 Sum_probs=46.2
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCc-ccEEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRS-YGIISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~-fD~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
.+||+..| .+++.+|+.+|+..+.+++..|+.....+... . + .+++|.|++++ ++..+++.+++..
T Consensus 125 ~vi~l~~~-~e~~~~Rl~~r~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~Id~~~~~---~~~~~~i~~~l~~ 191 (195)
T 2pbr_A 125 ITLLLDIP-VDIALRRLKEKNRFENKEFLEKVRKGFLELAK-E----EENVVVIDASGEE---EEVFKEILRALSG 191 (195)
T ss_dssp EEEEEECC-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH-H----STTEEEEETTSCH---HHHHHHHHHHHHT
T ss_pred EEEEEeCC-HHHHHHHhhccCccchHHHHHHHHHHHHHHHh-h----CCCEEEEECCCCH---HHHHHHHHHHHHH
Confidence 67888876 79999999877655556677777644333211 0 1 13788888788 9999999888864
No 46
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=96.87 E-value=0.00044 Score=52.25 Aligned_cols=69 Identities=14% Similarity=0.060 Sum_probs=49.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+|||.+| .+++.+|+..|...+++++..|+........+.. .+|++|.|++++ +++.+++.+++....
T Consensus 127 ~~i~l~~~-~e~~~~R~~~R~~~~~~~~~~~i~~~~~~~~~~~----~ad~vId~~~~~---~~~~~~i~~~~~~~~ 195 (203)
T 1uf9_A 127 GTLLVAAP-LEERVRRVMARSGLSREEVLARERAQMPEEEKRK----RATWVLENTGSL---EDLERALKAVLAELT 195 (203)
T ss_dssp EEEEECCC-HHHHHHHHHTTTCCTTHHHHHHHTTSCCHHHHHH----HCSEEECCSSHH---HHHHHHHHHHHHSCC
T ss_pred EEEEEECC-HHHHHHHHHHcCCCCHHHHHHHHHHCCChhHHHH----hCCEEEECCCCH---HHHHHHHHHHHHHHH
Confidence 78999975 8999999998855566777777764211112222 568899888678 899999998886543
No 47
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=96.87 E-value=0.016 Score=43.66 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=41.3
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHH--HHHHHHHHHHHHhhcCCCCCCccc-EEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETED--SLRRRLDLARRDMSYGKDSLRSYG-IISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee--~I~~Rl~~A~~e~~~~~~~~~~fD-~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+||+..| .+++.+ +|+.+..+ ++..|+..+-.+..... ..+ ++|.|+.++ ++.++++.+++....
T Consensus 124 ~vi~l~~~-~e~~~~---~R~~d~~e~~~~~~rl~~~y~~~~~~~----~~~~~~Id~~~~~---~~v~~~i~~~l~~~l 192 (204)
T 2v54_A 124 LVIFLESG-SKEINR---NVGEEIYEDVTFQQKVLQEYKKMIEEG----DIHWQIISSEFEE---DVKKELIKNIVIEAI 192 (204)
T ss_dssp EEEEECCC-HHHHTT---CCSSSTTCCSHHHHHHHHHHHHHHTTC----SSCEEEECTTSCH---HHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHh---hcCcccccHHHHHHHHHHHHHHHHHhC----CCcEEEEECCCCH---HHHHHHHHHHHHHHH
Confidence 56777765 566554 45433333 77888876544433211 124 566666688 999999999887654
Q ss_pred h
Q psy18086 146 E 146 (166)
Q Consensus 146 ~ 146 (166)
.
T Consensus 193 ~ 193 (204)
T 2v54_A 193 H 193 (204)
T ss_dssp H
T ss_pred h
Confidence 3
No 48
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=96.86 E-value=0.01 Score=44.28 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=43.9
Q ss_pred eEEEEEeCCCHHHHHHHh--hc---CCCCCHHHHHHHHHHH--HHHhhcCCCCCCcccEEEEcCC-CCCCHhHHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRL--RG---RGTETEDSLRRRLDLA--RRDMSYGKDSLRSYGIISELAF-FLEYNSAAGEIFEH 139 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL--~~---Rgtetee~I~~Rl~~A--~~e~~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~ 139 (166)
..+||+.+| .+++.+|+ +. |...++++...++..- +++--|.. .+|++|.|++ ++ +++.+++.+
T Consensus 99 ~~vi~L~~~-~e~l~~Rl~~~~~~~rp~~~~~~~~~~l~~~~~~r~~~y~~----~ad~~Idt~~~~~---~e~~~~I~~ 170 (185)
T 3trf_A 99 GVVIYLTAS-IDTQLKRIGQKGEMRRPLFIKNNSKEKLQQLNEIRKPLYQA----MADLVYPTDDLNP---RQLATQILV 170 (185)
T ss_dssp EEEEEEECC-HHHHHHHHHCCTTCSSCCCCCHHHHHHHHHHHHHHHHHHHH----HCSEEEECTTCCH---HHHHHHHHH
T ss_pred CcEEEEECC-HHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhh----cCCEEEECCCCCH---HHHHHHHHH
Confidence 378999986 99999999 43 4334444434444432 12222333 5799999984 57 888888888
Q ss_pred HHHhh
Q psy18086 140 FGLKS 144 (166)
Q Consensus 140 ii~~~ 144 (166)
++...
T Consensus 171 ~l~~~ 175 (185)
T 3trf_A 171 DIKQT 175 (185)
T ss_dssp HSCC-
T ss_pred HHHHH
Confidence 77554
No 49
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=96.81 E-value=0.019 Score=45.81 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=62.9
Q ss_pred HHHHHhcCCcEEEE---------------eCHHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHH
Q psy18086 17 VEAVINSGKTCVLD---------------IEVQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEEL 81 (166)
Q Consensus 17 V~~v~~~Gk~~vld---------------id~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~L 81 (166)
|...+++|+++|+| ++..-+..+..... ++.. .-.+||+..| .+++
T Consensus 102 i~~~l~~g~~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~-----------------~~~~-pd~vi~L~~~-~e~~ 162 (229)
T 4eaq_A 102 VIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI-----------------NGLY-PDLTIYLNVS-AEVG 162 (229)
T ss_dssp CHHHHHTTCEEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHH-----------------TTCC-CSEEEEEECC-HHHH
T ss_pred HHHHHHCCCEEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHh-----------------cCCC-CCEEEEEeCC-HHHH
Confidence 45667899999999 45554444443200 0111 1256777765 7999
Q ss_pred HHHhhcCCCC------CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 82 ETRLRGRGTE------TEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 82 e~RL~~Rgte------tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+|+.+|+.. .+.++.+|+..+-.++.... + ...++|.++.++ ++..+++.+++....
T Consensus 163 ~~R~~~R~~~~dr~e~~~~~~~~rv~~~y~~l~~~~-~--~~~~vIDa~~s~---eev~~~I~~~l~~~l 226 (229)
T 4eaq_A 163 RERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNE-S--QRFKSVNADQPL---ENVVEDTYQTIIKYL 226 (229)
T ss_dssp HHHHHHC-----CCCHHHHHHHHHHHHHHHHHTTTC-T--TTEEEEETTSCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCccchhhhhHHHHHHHHHHHHHHHHhC-C--CCEEEEeCCCCH---HHHHHHHHHHHHHHh
Confidence 9999988532 24456777776654442211 1 123456666688 999999998887643
No 50
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=96.75 E-value=0.0013 Score=50.07 Aligned_cols=67 Identities=15% Similarity=0.054 Sum_probs=50.1
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
.+||+.+| .+++.+|+.+|+ .+.+++..|+........+.. ..|++|.|++++ ++.++++.+++.+.
T Consensus 126 ~~i~l~~~-~e~~~~Rl~~R~-~~~~~~~~~~~~~~~~~~~~~----~ad~vId~~~~~---~~~~~~i~~~l~~~ 192 (204)
T 2if2_A 126 KLIVVYAP-YEVCKERAIKRG-MSEEDFERRWKKQMPIEEKVK----YADYVIDNSGSI---EETYKQVKKVYEEL 192 (204)
T ss_dssp EEEEECCC-HHHHHHHHHHTC-CCHHHHHHHHTTSCCHHHHGG----GCSEECCCSSCH---HHHHHHHHHHHHTT
T ss_pred EEEEEECC-HHHHHHHHHHcC-CCHHHHHHHHHhCCChhHHHh----cCCEEEECCCCH---HHHHHHHHHHHHHH
Confidence 67888876 899999999996 677788877765322222333 568899888788 99999999988654
No 51
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=96.75 E-value=0.0075 Score=44.63 Aligned_cols=65 Identities=12% Similarity=-0.066 Sum_probs=35.6
Q ss_pred EEEEEeCCCHHHHHHHhhc--CCC---CCHHHHH--HHHHHHHHHhh--cCCCCCCcccEEEE-c-CCCCCCHhHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRG--RGT---ETEDSLR--RRLDLARRDMS--YGKDSLRSYGIISE-L-AFFLEYNSAAGEIF 137 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~--Rgt---etee~I~--~Rl~~A~~e~~--~~~~~~~~fD~vIv-N-d~dl~~~e~a~~~l 137 (166)
.+||+.+|....+++|+.. |++ ++++.+. .++..+..+.. +.. .+++++ | ++++ +++++++
T Consensus 118 ~vi~l~~~~~~~~~rr~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~I~d~~~~~---e~v~~~I 189 (194)
T 1nks_A 118 VIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAG-----STVKVIVNVEGDP---SIAANEI 189 (194)
T ss_dssp EEEEEECCHHHHHHHHHHCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCSSCH---HHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHhhcccCCCCccCHHHHHHHHHHHHHHHHHHHHhcC-----CcEEEEeCCCCCH---HHHHHHH
Confidence 4677776634445566877 765 3555554 33444433321 111 243444 4 4457 8888888
Q ss_pred HHHH
Q psy18086 138 EHFG 141 (166)
Q Consensus 138 ~~ii 141 (166)
.+++
T Consensus 190 ~~~l 193 (194)
T 1nks_A 190 IRSM 193 (194)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 52
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=96.60 E-value=0.0022 Score=55.84 Aligned_cols=89 Identities=15% Similarity=0.072 Sum_probs=56.1
Q ss_pred ccCcHHHHHHHHhcCCcEEEEeC------HHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHH
Q psy18086 10 YMVNRAAVEAVINSGKTCVLDIE------VQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELET 83 (166)
Q Consensus 10 YGTs~~~V~~v~~~Gk~~vldid------~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~ 83 (166)
|+...+.+...+.+|+.+|+|.- .+....+.+..+. ...+||+.+ |.+++.+
T Consensus 295 ~~~~~~~~~~~l~~g~~vIiD~~~~~~~~r~~~~~~~~~~~~---------------------~~~~v~l~~-~~e~l~~ 352 (416)
T 3zvl_A 295 WQRCVSSCQAALRQGKRVVIDNTNPDVPSRARYIQCAKDAGV---------------------PCRCFNFCA-TIEQARH 352 (416)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHHHHHTC---------------------CEEEEEECC-CHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHHHHHcCC---------------------eEEEEEEeC-CHHHHHH
Confidence 56667778888999999999843 3333333333232 456666654 6999999
Q ss_pred HhhcCCC------CCHHHHHHHHHHHHHHhhcCCCCCCcccEEE-EcC
Q psy18086 84 RLRGRGT------ETEDSLRRRLDLARRDMSYGKDSLRSYGIIS-ELA 124 (166)
Q Consensus 84 RL~~Rgt------etee~I~~Rl~~A~~e~~~~~~~~~~fD~vI-vNd 124 (166)
|+..|.. +.++++-.++..+.++..... .||+++ +|-
T Consensus 353 R~~~R~~~~~~~~~~~~~~~~~~~~~~e~P~~~E----~fd~v~~v~~ 396 (416)
T 3zvl_A 353 NNRFREMTDPSHAPVSDMVMFSYRKQFEPPTLAE----GFLEILEIPF 396 (416)
T ss_dssp HHHHHHHHCTTCCCCCHHHHHHHHHHCCCCCGGG----TCSEEEEECC
T ss_pred HHHhhcccCCCcCCCCHHHHHHHHHhcCCCCccc----CCcEEEEEec
Confidence 9988853 444555555555433443333 788776 454
No 53
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=96.59 E-value=0.012 Score=44.33 Aligned_cols=67 Identities=9% Similarity=-0.060 Sum_probs=47.0
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHH-HhhcCCCCCCccc-EEEEcCC-CCCCHhHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARR-DMSYGKDSLRSYG-IISELAF-FLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~-e~~~~~~~~~~fD-~vIvNd~-dl~~~e~a~~~l~~ii~ 142 (166)
++|||..| .+++.+|+.+|...+.+++..++..-.. +..+.. . ..| ++|.|++ ++ +++.+++.+++.
T Consensus 138 ~~i~l~a~-~e~~~~R~~~r~~~~~~~~~~~~~~R~~~~~~~~~--~-~ad~~~Id~~~~~~---ee~~~~I~~~~~ 207 (208)
T 3ake_A 138 HKFYLTAS-PEVRAWRRARERPQAYEEVLRDLLRRDERDKAQSA--P-APDALVLDTGGMTL---DEVVAWVLAHIR 207 (208)
T ss_dssp EEEEEECC-HHHHHHHHHHTSSSCHHHHHHHHHHHHHTC--CCC--C-CTTCEEEETTTSCH---HHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHhhcccCHHHHHHHHHHHHHHHhhccc--C-CCCEEEEECCCCCH---HHHHHHHHHHHh
Confidence 78999986 8999999988876778888887763211 111111 1 346 8888885 78 888888888764
No 54
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=96.43 E-value=0.015 Score=43.99 Aligned_cols=67 Identities=9% Similarity=0.003 Sum_probs=45.0
Q ss_pred EEEEEeCCCHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 69 VYVFVKPPSIEELETRLRGR-GTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R-gtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
.+||+.+| .+++.+|+.+| .+...+++..|+...-.+... . ..+++|.|+.++ ++.++++.+++...
T Consensus 133 ~vi~l~~~-~e~~~~Rl~~r~~r~~~~~~~~~~~~~~~~~~~-~----~~~~~Id~~~~~---~~~~~~i~~~l~~~ 200 (212)
T 2wwf_A 133 VVFYLNVP-PNYAQNRSDYGEEIYEKVETQKKIYETYKHFAH-E----DYWINIDATRKI---EDIHNDIVKEVTKI 200 (212)
T ss_dssp EEEEEECC-TTGGGGSTTTTSSTTCSHHHHHHHHHHGGGGTT-C----TTEEEEECSSCH---HHHHHHHHHHHTTS
T ss_pred EEEEEeCC-HHHHHHhhccCcccccHHHHHHHHHHHHHHHhc-c----CCEEEEECCCCH---HHHHHHHHHHHHHh
Confidence 57788775 57888898765 222335677777544222211 1 457888888788 99999999988654
No 55
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=96.40 E-value=0.021 Score=46.61 Aligned_cols=124 Identities=14% Similarity=0.079 Sum_probs=62.7
Q ss_pred cCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCC
Q psy18086 11 MVNRAAVEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRG 89 (166)
Q Consensus 11 GTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rg 89 (166)
....+.|+..+++|++||+|=-+.....+... .++ + .-.+...... -.|+-..+ .+||+..| .+++.+|+.+|+
T Consensus 102 ~~~~~~I~paL~~g~~VI~DRy~~S~~AYq~~~rgl-~-~~~i~~l~~~-~~~~~~PD-lvi~Ldv~-~e~~~~Ri~~R~ 176 (236)
T 3lv8_A 102 QLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQI-A-PSTMQSLKQT-ALGDFKPD-LTLYLDID-PKLGLERARGRG 176 (236)
T ss_dssp HHHHHTHHHHHHTTCEEEEESCHHHHHHHTTTTTCC-C-HHHHHHHHHH-HHTTCCCS-EEEEEECC-HHHHHHC-----
T ss_pred HHHHHHHHHHHHcCCEEEEeeecchHHhhhhhccCC-C-HHHHHHHHHH-HhcCCCCC-EEEEEeCC-HHHHHHHHHhcC
Confidence 33344567778899999999322221111100 000 0 0000000000 01222233 56777775 799999999886
Q ss_pred C----CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 90 T----ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 90 t----et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
. |. ..+...|+..+-.++.... + . ..+|.++.++ ++..+++.+++.....
T Consensus 177 ~~dr~E~~~~~~~~rv~~~y~~la~~~-~--~-~~vIDa~~si---eeV~~~I~~~l~~~l~ 231 (236)
T 3lv8_A 177 ELDRIEKMDISFFERARERYLELANSD-D--S-VVMIDAAQSI---EQVTADIRRALQDWLS 231 (236)
T ss_dssp CCCTTTTSCHHHHHHHHHHHHHHHHHC-T--T-EEEEETTSCH---HHHHHHHHHHHHHHHT
T ss_pred CcchhhhhHHHHHHHHHHHHHHHHHHC-C--C-EEEEeCCCCH---HHHHHHHHHHHHHHHH
Confidence 3 22 2467777776644443211 1 2 4566666788 8999999888876553
No 56
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=96.34 E-value=0.02 Score=42.34 Aligned_cols=64 Identities=16% Similarity=0.106 Sum_probs=41.2
Q ss_pred EEEEEeCCCHHHHHH-Hhhc--CC--CCCHHHHHHHHHHHHHHh----hcCCCCCCcccEEEEcCCC--CCCHhHHHHHH
Q psy18086 69 VYVFVKPPSIEELET-RLRG--RG--TETEDSLRRRLDLARRDM----SYGKDSLRSYGIISELAFF--LEYNSAAGEIF 137 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~-RL~~--Rg--tetee~I~~Rl~~A~~e~----~~~~~~~~~fD~vIvNd~d--l~~~e~a~~~l 137 (166)
++||+.+| .+++.+ |+.. |+ .++.+++..+....+... .|.. ...++|.|. + + +++++++
T Consensus 117 ~~i~l~~~-~~~~~~rRl~~~~R~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~-~~~~---e~~~~~i 187 (192)
T 1kht_A 117 LIIVVETT-GDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTG----ATVKIVQNR-NGLL---DQAVEEL 187 (192)
T ss_dssp EEEEEECC-HHHHHHHHHTSSSCSSSCCCHHHHHHHHHHHHHHHHHHHHHHC----CEEEEEECC-TTCH---HHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHhhhcccCCCcCCHHHHHHHHHHHHHHHHHHHHhcC----CcEEEEeCC-CCCH---HHHHHHH
Confidence 58999987 677764 9976 54 456666765555443322 1212 345666677 6 8 9999888
Q ss_pred HHHH
Q psy18086 138 EHFG 141 (166)
Q Consensus 138 ~~ii 141 (166)
.+++
T Consensus 188 ~~~i 191 (192)
T 1kht_A 188 TNVL 191 (192)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 57
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=96.29 E-value=0.056 Score=39.91 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=39.7
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCC--CCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHhh
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGT--ETEDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgt--etee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~~ 144 (166)
+..||+..| .+++.+|+.+|+. .+.+.++..++ ..... . ..+ +|.|+ .++ +++.+++.+++...
T Consensus 106 ~~~i~l~~~-~e~~~~R~~~R~~r~~~~~~~~~~~~-~~~~~---~----~~~-~Id~~~~~~---~~~~~~I~~~l~~~ 172 (183)
T 2vli_A 106 VHHFTLIAP-LNVVLERLRRDGQPQVNVGTVEDRLN-ELRGE---Q----FQT-HIDTAGLGT---QQVAEQIAAQVGLT 172 (183)
T ss_dssp CEEEEEECC-HHHHHHHHHTC----CCHHHHHHHHH-HHTSG---G----GCS-EEECTTCCH---HHHHHHHHHHHTCC
T ss_pred eEEEEEeCC-HHHHHHHHHhccccchhHHHHHHHHH-hhccc---c----cce-EeeCCCCCH---HHHHHHHHHHHHHh
Confidence 456888875 8999999988862 23444443222 11111 1 224 78776 578 88889988888654
No 58
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=96.27 E-value=0.12 Score=39.38 Aligned_cols=69 Identities=16% Similarity=-0.039 Sum_probs=47.0
Q ss_pred eEEEEEeCCCHHHHHHHhh-cC------CCCCHHHHHHHHHHHHHH-hhcCCCCCCcccEEEEcCC-CCCCHhHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLR-GR------GTETEDSLRRRLDLARRD-MSYGKDSLRSYGIISELAF-FLEYNSAAGEIFE 138 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~-~R------gtetee~I~~Rl~~A~~e-~~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~ 138 (166)
..+||+.+| .+++.+|+. .| ...+++++..++..-..+ ..+.. .+|++|.|++ ++ +++++++.
T Consensus 119 ~~vi~L~~~-~e~l~~Rl~~~~~~Rp~~~~~~~~~~~~~i~~~~~~r~~~y~----~ad~~Idt~~~s~---ee~~~~I~ 190 (199)
T 3vaa_A 119 GKTVFLNVH-PDVLFRRLRIAKQQRPILQGKEDDELMDFIIQALEKRAPFYT----QAQYIFNADELED---RWQIESSV 190 (199)
T ss_dssp SEEEEEECC-HHHHHHHHHHTGGGCGGGTTCCHHHHHHHHHHHHHHHHHHHT----TSSEEEECCCCSS---HHHHHHHH
T ss_pred CEEEEEECC-HHHHHHHHhcCCCCCCCcCCCChhhHHHHHHHHHHHHHHHHh----hCCEEEECCCCCH---HHHHHHHH
Confidence 468888886 999999998 33 134566666666543322 12222 3689999985 68 99999999
Q ss_pred HHHHhh
Q psy18086 139 HFGLKS 144 (166)
Q Consensus 139 ~ii~~~ 144 (166)
+.+.+.
T Consensus 191 ~~l~~~ 196 (199)
T 3vaa_A 191 QRLQEL 196 (199)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888654
No 59
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=95.86 E-value=0.037 Score=41.10 Aligned_cols=54 Identities=11% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHHhcCCcEEEEeCHHHH------HHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhc
Q psy18086 14 RAAVEAVINSGKTCVLDIEVQGV------QQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRG 87 (166)
Q Consensus 14 ~~~V~~v~~~Gk~~vldid~~Gv------~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~ 87 (166)
.+.+..+++.|..+|+|-..... ..+++.++ ....+||+.+| .+++.+|+.+
T Consensus 67 ~~~~~~~l~~g~~vi~d~~~~~~~~~~~~~~l~~~~~---------------------~~~~~v~l~~~-~e~~~~R~~~ 124 (193)
T 2rhm_A 67 YHTAATILQSGQSLIMESNFRVDLDTERMQNLHTIAP---------------------FTPIQIRCVAS-GDVLVERILS 124 (193)
T ss_dssp HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHHHSC---------------------CEEEEEEEECC-HHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHhcC---------------------CeEEEEEEeCC-HHHHHHHHHH
Confidence 34556678899999999776221 11333311 13467888865 8999999987
Q ss_pred CC
Q psy18086 88 RG 89 (166)
Q Consensus 88 Rg 89 (166)
|+
T Consensus 125 R~ 126 (193)
T 2rhm_A 125 RI 126 (193)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 60
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=95.59 E-value=0.061 Score=40.63 Aligned_cols=65 Identities=17% Similarity=0.146 Sum_probs=41.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHH------HHHh-hcCCCCCCcccEEEE-cCCCCCCHhHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLA------RRDM-SYGKDSLRSYGIISE-LAFFLEYNSAAGEIFEHF 140 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A------~~e~-~~~~~~~~~fD~vIv-Nd~dl~~~e~a~~~l~~i 140 (166)
.+||+.+| .+++.+||.+|+. +...++.++... .... .|. .|++|. |++++ ++..+++.++
T Consensus 103 ~vi~l~~~-~e~~~~Rl~~R~~-~~~~~~~~~~~q~~~~l~~~~~~~y~------~~~vi~~n~~~~---~~~~~~v~~i 171 (184)
T 1y63_A 103 MVVVLHTS-TEVLFERLTKRQY-SEAKRAENMEAEIQCICEEEARDAYE------DDIVLVRENDTL---EQMAATVEEI 171 (184)
T ss_dssp EEEEEECC-HHHHHHHHHHTTC-CHHHHHHHHHHHHTTHHHHHHHHHSC------GGGEEEEECSSH---HHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHhCCC-ChhhhHhhHHHHHHHHHHHHHHHHhc------cCcEEECCCCCH---HHHHHHHHHH
Confidence 67888875 9999999999963 555565554321 1111 222 266775 76688 8887777777
Q ss_pred HHhh
Q psy18086 141 GLKS 144 (166)
Q Consensus 141 i~~~ 144 (166)
+...
T Consensus 172 ~~~l 175 (184)
T 1y63_A 172 RERV 175 (184)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 61
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=95.32 E-value=0.044 Score=40.35 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=40.1
Q ss_pred eEEEEEeCCCHHHHHHHhhcCC-----CCC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRG-----TET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rg-----tet-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii 141 (166)
..+|||..| .+++.+|+.+|+ ..+ .+.++.++..- .. .|.. ..|++|.|++++ +++.+++.+++
T Consensus 98 ~~vi~l~~~-~e~~~~Rl~~r~~~~r~~~~~~~~~~~~~~~r-~~-~~~~----~a~~~Id~~~~~---e~~~~~I~~~l 167 (168)
T 1zuh_A 98 GTTFYLKMD-FETLIKRLNQKEREKRPLLNNLTQAKELFEKR-QA-LYEK----NASFIIDARGGL---NNSLKQVLQFI 167 (168)
T ss_dssp EEEEEEECC-HHHHHHHHCC--------CCTTHHHHHHHHHH-HH-HHHH----TCSEEEEGGGCH---HHHHHHHHHC-
T ss_pred CEEEEEECC-HHHHHHHHhccCCCCCCCccCHHHHHHHHHHH-HH-HHHH----HCCEEEECCCCH---HHHHHHHHHHh
Confidence 478999986 899999998772 112 35565555432 11 1222 468999998677 88877776643
No 62
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=95.29 E-value=0.059 Score=40.16 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=46.1
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCH----HHHHHHHHHHHHH-h-hcC-CCCCCcccEEEEcCCCCCCHhHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETE----DSLRRRLDLARRD-M-SYG-KDSLRSYGIISELAFFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtete----e~I~~Rl~~A~~e-~-~~~-~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii 141 (166)
.+||+.+| .+++.+|+.+|+...+ .+...++.....+ . .|. . ..|++|.|++++ ++..+++.+++
T Consensus 127 ~vi~L~~~-~e~~~~Rl~~R~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~Id~~~~~---~~v~~~I~~~l 198 (205)
T 2jaq_A 127 IVIYLRVS-TKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFYKQNVYD----FPFFVVDAELDV---KTQIELIMNKL 198 (205)
T ss_dssp EEEEEECC-HHHHHHHHHHHTCHHHHHSCHHHHHHHHHHHHHHHHHHTTT----SCEEEEETTSCH---HHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHHcCChhhhcCcHHHHHHHHHHHHHHHHHcccc----CcEEEEECCCCH---HHHHHHHHHHH
Confidence 68999986 8999999988874222 1445566554332 2 232 2 458889888778 88888888887
Q ss_pred Hh
Q psy18086 142 LK 143 (166)
Q Consensus 142 ~~ 143 (166)
..
T Consensus 199 ~~ 200 (205)
T 2jaq_A 199 NS 200 (205)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 63
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=95.20 E-value=0.041 Score=40.84 Aligned_cols=66 Identities=23% Similarity=0.178 Sum_probs=44.6
Q ss_pred EEEEEeCCCHHHHHHHhhcCC------CCCHHHHHHHHHHHHHHh-----hcCCCCCCcccEEEEcCCCCCCHhHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRG------TETEDSLRRRLDLARRDM-----SYGKDSLRSYGIISELAFFLEYNSAAGEIF 137 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg------tetee~I~~Rl~~A~~e~-----~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l 137 (166)
.+||+..| .+++.+|+.+|+ .++++.+++|+....... .|.. . ..+++|.|+.++ ++..+++
T Consensus 108 ~vi~l~~~-~e~~~~R~~~R~~~~~r~~~~~~~~~~r~~~~~~~~~~l~~~~~~-~--~~~~~id~~~~~---~~v~~~i 180 (186)
T 3cm0_A 108 GVVLVEVP-EEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEA-R--GVLKRVDGLGTP---DEVYARI 180 (186)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHH-T--TCEEEEECCSCH---HHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-c--CcEEEEECCCCH---HHHHHHH
Confidence 67888876 899999997763 257888998887653321 1211 0 125677776678 8888888
Q ss_pred HHHH
Q psy18086 138 EHFG 141 (166)
Q Consensus 138 ~~ii 141 (166)
.+++
T Consensus 181 ~~~l 184 (186)
T 3cm0_A 181 RAAL 184 (186)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7765
No 64
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=95.19 E-value=0.14 Score=39.11 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=45.3
Q ss_pred eEEEEEeCCCHHHHHHHhh----cCCC-CCHHHHHHHHHHHH-HHhhcCCCCC-Cccc-EEEEcCC-CCCCHhHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLR----GRGT-ETEDSLRRRLDLAR-RDMSYGKDSL-RSYG-IISELAF-FLEYNSAAGEIFE 138 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~----~Rgt-etee~I~~Rl~~A~-~e~~~~~~~~-~~fD-~vIvNd~-dl~~~e~a~~~l~ 138 (166)
.++|||.+| .+++.+|+. .|+. .+.+++..++..-. .+......+. ...| ++|.|++ ++ +++.+++.
T Consensus 137 ~~vi~l~a~-~e~~~~R~~~~~~~r~~~~~~e~~~~~~~~r~~~d~~r~~~~~~~~~d~~~Id~~~~~~---ee~~~~I~ 212 (219)
T 2h92_A 137 DLKVYMIAS-VEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPLRKADDAVTLDTTGKSI---EEVTDEIL 212 (219)
T ss_dssp SEEEEEECC-HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHCSSSCSCCCTTCEEEECTTCCH---HHHHHHHH
T ss_pred CEEEEEECC-HHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHhhhhhhccccccCCCeEEEECCCCCH---HHHHHHHH
Confidence 467999885 888888863 4664 37888888885321 1221110010 0345 8888884 78 88988888
Q ss_pred HHHH
Q psy18086 139 HFGL 142 (166)
Q Consensus 139 ~ii~ 142 (166)
+++.
T Consensus 213 ~~l~ 216 (219)
T 2h92_A 213 AMVS 216 (219)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 65
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=95.14 E-value=0.18 Score=39.55 Aligned_cols=70 Identities=11% Similarity=0.187 Sum_probs=44.7
Q ss_pred EEEEEeCCCHHHHHHHh----hcCC-CCCHHHHHHHHHHHH-HHhhcCCCCCC-ccc-EEEEcCC-CCCCHhHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRL----RGRG-TETEDSLRRRLDLAR-RDMSYGKDSLR-SYG-IISELAF-FLEYNSAAGEIFEH 139 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL----~~Rg-tetee~I~~Rl~~A~-~e~~~~~~~~~-~fD-~vIvNd~-dl~~~e~a~~~l~~ 139 (166)
++|||.+| .+++.+|+ ..|+ ..+.+++..++..-. .+..+.-.|.. ..| ++|.|++ ++ +++.+++.+
T Consensus 155 ~vi~L~a~-~e~~~~R~~~~~~~R~~~~~~e~~~~~i~~R~~~~~~~~~~p~~~~~d~~vId~~~~s~---eev~~~I~~ 230 (236)
T 1q3t_A 155 LKIFLVAS-VDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNI---QEVVEKIKA 230 (236)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSSSCCSCCTTCEEEECSSCCH---HHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhcccccccccCCEEEEcCCCCCH---HHHHHHHHH
Confidence 67999986 88887886 5677 357788887775321 11111001110 224 8888884 78 888888888
Q ss_pred HHH
Q psy18086 140 FGL 142 (166)
Q Consensus 140 ii~ 142 (166)
++.
T Consensus 231 ~l~ 233 (236)
T 1q3t_A 231 EAE 233 (236)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 66
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=94.81 E-value=0.27 Score=39.50 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=46.8
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHH---HH-Hhh-c----CCCCCCcccEEEEcCC-CCCCHhHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLA---RR-DMS-Y----GKDSLRSYGIISELAF-FLEYNSAAGEI 136 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A---~~-e~~-~----~~~~~~~fD~vIvNd~-dl~~~e~a~~~ 136 (166)
+.+.|||..| ++++.+|+.++...+.++..+++..- +. ... | +.++. .+|++|..+. .+ +++++.
T Consensus 137 ~~~~VfL~A~-~e~r~~Ri~~~~~~~~~~a~~~I~~~d~~R~~~Y~~ytg~~~~~~~-~~dl~IdT~~l~~---eevv~~ 211 (223)
T 3hdt_A 137 RLIRIFVYTD-KVKKVQRVMEVDCIDEERAKRRIKKIEKERKEYYKYFTGSEWHSMK-NYDLPINTTKLTL---EETAEL 211 (223)
T ss_dssp EEEEEEEECC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGG-GCSEEEECTTCCH---HHHHHH
T ss_pred CeEEEEEECC-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcc-cCeEEEECCCCCH---HHHHHH
Confidence 5799999996 99999998765445666655554432 11 111 1 12233 6899988872 45 788888
Q ss_pred HHHHHHh
Q psy18086 137 FEHFGLK 143 (166)
Q Consensus 137 l~~ii~~ 143 (166)
+.+++..
T Consensus 212 I~~~i~~ 218 (223)
T 3hdt_A 212 IKAYIRL 218 (223)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877753
No 67
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=94.74 E-value=1.1 Score=35.51 Aligned_cols=119 Identities=9% Similarity=0.071 Sum_probs=64.1
Q ss_pred HHHHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhh-ccCCCCceEEEEEeCCCHHHHHHHhhcCCC--
Q psy18086 15 AAVEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKR-AGGAMAGAVYVFVKPPSIEELETRLRGRGT-- 90 (166)
Q Consensus 15 ~~V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt-- 90 (166)
+.|+..+++|++||+|=-.......... .|+ + .-.+... -+. .|+-... .+||+..| .+++.+|+.+|+.
T Consensus 83 ~~i~p~l~~g~~Vi~DRy~~S~~ayq~~~~g~-~-~~~~~~l--~~~~~~~~~PD-lvi~Ld~~-~e~~~~Ri~~R~~~d 156 (213)
T 4edh_A 83 GVIRPALARGAVVLCDRFTDATYAYQGGGRGL-P-EARIAAL--ESFVQGDLRPD-LTLVFDLP-VEIGLARAAARGRLD 156 (213)
T ss_dssp HTHHHHHHTTCEEEEESCHHHHHHHTTTTTCC-C-HHHHHHH--HHHHHTTCCCS-EEEEEECC-HHHHHHHHCCCSSCC
T ss_pred HHHHHHHHCCCEEEECccHhHHHHHhhhccCC-C-HHHHHHH--HHHHhcCCCCC-EEEEEeCC-HHHHHHHHHhcCCcC
Confidence 3456677899999998544332222111 010 0 0000000 011 1233333 57788875 8999999998863
Q ss_pred --CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 91 --ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 91 --et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
|. ..+..+|+..+-.++.... + .--++|..+.++ ++..+++.+++....
T Consensus 157 r~E~~~~~~~~rv~~~y~~l~~~~-~--~~~~vIDa~~s~---eeV~~~I~~~l~~~l 208 (213)
T 4edh_A 157 RFEQEDRRFFEAVRQTYLQRAAQA-P--ERYQVLDAGLPL---AEVQAGLDRLLPNLL 208 (213)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHHC-T--TTEEEEETTSCH---HHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHC-C--CcEEEEeCCCCH---HHHHHHHHHHHHHHH
Confidence 22 1356677666544442111 1 123556666678 888888888876544
No 68
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=94.74 E-value=0.11 Score=40.39 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=46.1
Q ss_pred EEEEEeCCCHHHHHHHhhcC---------------------------------CCCCHHHHHHHHHHHHHHhhc-CCCCC
Q psy18086 69 VYVFVKPPSIEELETRLRGR---------------------------------GTETEDSLRRRLDLARRDMSY-GKDSL 114 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R---------------------------------gtetee~I~~Rl~~A~~e~~~-~~~~~ 114 (166)
.+||+..| .+++.+|+..| ..++++.+++|+......... ..
T Consensus 110 ~vi~L~~~-~~~~~~R~~~R~~~~~~~~~y~~~~~pp~~~~~~~~~~~~l~~r~~~~~e~~~~r~~~y~~~~~~l~~--- 185 (227)
T 1zd8_A 110 TVINLNVP-FEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQTKPVLE--- 185 (227)
T ss_dssp EEEEEECC-HHHHHHHHTCEEEETTTTEEEETTTBCCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHHHHHHHH---
T ss_pred EEEEEECC-HHHHHHHHHcCcCCCccCCccccccCCCCcccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 57777775 78888887654 234678899999876544321 01
Q ss_pred Cccc----EEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 115 RSYG----IISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 115 ~~fD----~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
+|+ ++++|+.++ ++.++++.+++.....
T Consensus 186 -~y~~~~~~~~id~~~~---~~v~~~i~~~l~~~~~ 217 (227)
T 1zd8_A 186 -YYQKKGVLETFSGTET---NKIWPYVYAFLQTKVP 217 (227)
T ss_dssp -HHHHHTCEEEEECSSH---HHHHHHHHHHHTTTSC
T ss_pred -HHHccCCEEEEeCCCH---HHHHHHHHHHHHhhcC
Confidence 222 455554377 9999999999876543
No 69
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=94.68 E-value=0.17 Score=39.59 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=45.6
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHH---HHh--hc-CCCCC--CcccEEEEcCC-CCCCHhHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLAR---RDM--SY-GKDSL--RSYGIISELAF-FLEYNSAAGEIF 137 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~---~e~--~~-~~~~~--~~fD~vIvNd~-dl~~~e~a~~~l 137 (166)
..+.|||..| ++++.+|+.++...+.+++..+|..-. ... .+ +.+|+ ..+|++|.++. ++ +++++.+
T Consensus 117 ~~~~V~L~A~-~e~r~~R~~~~~~~~~~~~~~~i~~~d~~R~~~y~~~~~~~~~~~~~~dl~Idt~~l~~---eevv~~I 192 (201)
T 3fdi_A 117 NMISAFILGD-KDTKTKRVMEREGVDEKTALNMMKKMDKMRKVYHNFYCESKWGDSRTYDICIKIGKVDV---DTATDMI 192 (201)
T ss_dssp TEEEEEEEEC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCSSCTTBGGGCSEEEEESSSCH---HHHHHHH
T ss_pred CeEEEEEECC-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccCCEEEECCCCCH---HHHHHHH
Confidence 4789999985 999999987664456666666554321 111 11 22221 14789988872 45 7777777
Q ss_pred HHHHH
Q psy18086 138 EHFGL 142 (166)
Q Consensus 138 ~~ii~ 142 (166)
.+++.
T Consensus 193 ~~~i~ 197 (201)
T 3fdi_A 193 IKYID 197 (201)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 70
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=94.45 E-value=0.091 Score=42.52 Aligned_cols=124 Identities=12% Similarity=0.015 Sum_probs=66.5
Q ss_pred ccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhh-ccCCCCceEEEEEeCCCHHHHHHHh
Q psy18086 8 KSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKR-AGGAMAGAVYVFVKPPSIEELETRL 85 (166)
Q Consensus 8 n~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~IFI~PPS~e~Le~RL 85 (166)
+.|..-.+.|+..+++|++||+|=-+......... .|+ + .-.+. +.-+. .|+-..+ .+||+..| .+++.+|+
T Consensus 96 ~R~~~~~~~i~p~l~~g~~VI~DRy~~S~~ayq~~~~gl-~-~~~~~--~l~~~~~~~~~PD-l~I~Ldv~-~e~~~~Ri 169 (227)
T 3v9p_A 96 GRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGL-P-RDKLE--ALERWVQGGFQPD-LTVLFDVP-PQIASARR 169 (227)
T ss_dssp HHHHHHHHTHHHHHHTTCEEEEECCHHHHHHHHTTTTCC-C-HHHHH--HHHHHHHTTCCCS-EEEEEECC-SSCGGGTT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeccHhHHHHHhhhccCC-C-HHHHH--HHHHHHhcCCCCC-EEEEEeCC-HHHHHHHH
Confidence 44555555678888999999999544443322211 010 0 00000 00011 1333333 56777765 68899999
Q ss_pred hcCCC----CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 86 RGRGT----ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 86 ~~Rgt----et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
.+|+. |. ..+...|+..+-.++.... +. --++|..+.++ ++..+++.+++..
T Consensus 170 ~~R~~~dr~E~~~~ef~~rv~~~Y~~la~~~-~~--~~~vIDa~~s~---eeV~~~I~~~l~~ 226 (227)
T 3v9p_A 170 GAVRMPDKFESESDAFFARTRAEYLRRAQEA-PH--RFVIVDSSEPI---AQIRKQLEGVLAA 226 (227)
T ss_dssp TCCCCC---CCHHHHHHHHHHHHHHHHHHHC-TT--TEEEEETTSCH---HHHHHHHHHHHHH
T ss_pred HhccCccchhhhhHHHHHHHHHHHHHHHHHh-cC--CEEEEeCCCCH---HHHHHHHHHHHHh
Confidence 98862 33 2456667666544432111 11 23455555677 8888888877753
No 71
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=94.35 E-value=1.3 Score=34.72 Aligned_cols=116 Identities=14% Similarity=0.061 Sum_probs=57.5
Q ss_pred HHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhh-hhh-ccCCCCceEEEEEeCCCHHHHHHHhhcCCCCC-
Q psy18086 16 AVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQ-VKR-AGGAMAGAVYVFVKPPSIEELETRLRGRGTET- 92 (166)
Q Consensus 16 ~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgtet- 92 (166)
.|...+++|++||.|=-.......... ++..-..-+.. -+. .|+-..+ .+||+..| .++..+|+.+|+.+.
T Consensus 77 ~i~p~l~~g~~Vi~DRy~~S~~ayq~~----~~~~~~~~~~~l~~~~~~~~~PD-l~i~Ld~~-~e~~~~Ri~~r~~~~d 150 (205)
T 4hlc_A 77 KVIPALKEGKVVLCDRYIDSSLAYQGY----ARGIGVEEVRALNEFAINGLYPD-LTIYLNVS-AEVGRERIIKNSRDQN 150 (205)
T ss_dssp THHHHHHTTCEEEEECCHHHHHHHTTT----TTSSCHHHHHHHHHHHHTTCCCS-EEEEEECC-HHHHHHHHHC------
T ss_pred HHHHHHHcCCEEEecCcccchHHHHhc----cccchHHHHHHHHHHHhcCCCCC-EEeeeCCC-HHHHHHHHHhcCCccc
Confidence 356677999999998555443332111 00000000000 111 1222223 67888875 899999998887432
Q ss_pred -----HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHhh
Q psy18086 93 -----EDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 93 -----ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~~ 144 (166)
..+...|+..+-.++.... |. -++++|. .++ ++..+++.+.|.+.
T Consensus 151 r~e~~~~~f~~~v~~~Y~~l~~~~-~~---~~~~IDa~~~~---e~V~~~i~~~i~~~ 201 (205)
T 4hlc_A 151 RLDQEDLKFHEKVIEGYQEIIHNE-SQ---RFKSVNADQPL---ENVVEDTYQTIIKY 201 (205)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHSC-CT---TEEEEETTSCH---HHHHHHHHHHHHHH
T ss_pred chhccCHHHHHHHHHHHHHHHHhC-CC---CEEEEECCCCH---HHHHHHHHHHHHHH
Confidence 1245566665544442221 22 2455554 356 77777777766554
No 72
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=94.30 E-value=0.32 Score=35.28 Aligned_cols=64 Identities=14% Similarity=0.065 Sum_probs=41.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC-----CCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT-----ETEDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt-----etee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~ 142 (166)
.+||+..| .+++.+|+.+|.. +..+.+..++.... . .+. ..|++| |+ .++ ++..+++.+++.
T Consensus 95 ~~i~l~~~-~e~~~~R~~~r~~r~~~~~~~~~i~~~~~~~~-~-~~~-----~~~~~i-~~~~~~---~~~~~~i~~~l~ 162 (168)
T 2pt5_A 95 TTVFIDIP-FEVFLERCKDSKERPLLKRPLDEIKNLFEERR-K-IYS-----KADIKV-KGEKPP---EEVVKEILLSLE 162 (168)
T ss_dssp EEEEEECC-HHHHHHHCBCTTCCBGGGSCGGGTHHHHHHHH-H-HHT-----TSSEEE-ECSSCH---HHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHhCCCCCCCCcchHHHHHHHHHHHH-H-HHH-----hCCEEE-CCCCCH---HHHHHHHHHHHH
Confidence 68889886 8999999987631 11344555554221 1 121 258888 76 577 888888888876
Q ss_pred hh
Q psy18086 143 KS 144 (166)
Q Consensus 143 ~~ 144 (166)
+.
T Consensus 163 ~~ 164 (168)
T 2pt5_A 163 GN 164 (168)
T ss_dssp TS
T ss_pred hc
Confidence 43
No 73
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=94.17 E-value=1.2 Score=35.41 Aligned_cols=117 Identities=12% Similarity=0.034 Sum_probs=63.5
Q ss_pred HHHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhh-ccCCCCceEEEEEeCCCHHHHHHHhhcCCC---
Q psy18086 16 AVEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKR-AGGAMAGAVYVFVKPPSIEELETRLRGRGT--- 90 (166)
Q Consensus 16 ~V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgt--- 90 (166)
.|+..+++|++||+|=-.......... .|+ + .-.+... -+. .|+-..+ .+||+..| .+++.+|+.+|+.
T Consensus 85 ~i~paL~~g~~VI~DRy~~S~~AYq~~~~g~-~-~~~~~~l--~~~~~~~~~PD-l~i~Ldv~-~e~~~~Ri~~R~~~dr 158 (213)
T 4tmk_A 85 VIKPALANGTWVIGDRHDLSTQAYQGGGRGI-D-QHMLATL--RDAVLGDFRPD-LTLYLDVT-PEVGLKRARARGELDR 158 (213)
T ss_dssp THHHHHHTTCEEEEECCHHHHHHHTTTTTCC-C-HHHHHHH--HHHHHTTCCCS-EEEEEECC-HHHHHHHHHHHSSCCT
T ss_pred HHHHHHHCCCEEEEcCcHhHHHHHcccccCC-C-HHHHHHH--HHHhccCCCCC-EEEEEeCC-HHHHHHHHHhcCCccc
Confidence 356677999999998544443332211 010 0 0000000 011 1333333 56778775 8999999988864
Q ss_pred -CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 91 -ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 91 -et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
|. ..+...|+..+-.++.... . --.+|..+.++ ++..+++.+++....
T Consensus 159 ~E~~~~~f~~rv~~~y~~la~~~--~--~~~vIDa~~s~---eeV~~~I~~~l~~~l 208 (213)
T 4tmk_A 159 IEQESFDFFNRTRARYLELAAQD--K--SIHTIDATQPL---EAVMDAIRTTVTHWV 208 (213)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHTC--T--TEEEEETTSCH---HHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHC--C--cEEEECCCCCH---HHHHHHHHHHHHHHH
Confidence 11 2356667666544442211 1 12455555677 888888888886544
No 74
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=93.98 E-value=0.054 Score=41.71 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=28.5
Q ss_pred hcCCCCCHHHHHHHHHHHHHHhh-----cCCCC--CCcccEEEEcC-CCCCCHhHHHHHHHHHH
Q psy18086 86 RGRGTETEDSLRRRLDLARRDMS-----YGKDS--LRSYGIISELA-FFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 86 ~~Rgtetee~I~~Rl~~A~~e~~-----~~~~~--~~~fD~vIvNd-~dl~~~e~a~~~l~~ii 141 (166)
..|..++++.++.|+.....+.. |.... + ..-++.+|. .++ ++.++++.+++
T Consensus 154 ~~r~dd~~~~~~~rl~~y~~~~~~l~~~~~~~~~~~-~~~~~~ida~~~~---~~v~~~i~~~l 213 (214)
T 1e4v_A 154 TTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAG-NTKYAKVDGTKPV---AEVRADLEKIL 213 (214)
T ss_dssp BCCTTCSHHHHHHHHHHHHHHTTHHHHHHHHHHHHT-SCEEEEEETTSCH---HHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhccccc-CCeEEEEECCCCH---HHHHHHHHHHh
Confidence 34555678899999987655432 21100 0 012344444 466 77777776655
No 75
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=93.97 E-value=0.56 Score=34.03 Aligned_cols=66 Identities=18% Similarity=0.051 Sum_probs=42.5
Q ss_pred EEEEEeCCCHHHHHHHhh--cC-C---CCCHHHHHHHHHHHHHHhh-cCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLR--GR-G---TETEDSLRRRLDLARRDMS-YGKDSLRSYGIISELA-FFLEYNSAAGEIFEHF 140 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~--~R-g---tetee~I~~Rl~~A~~e~~-~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~i 140 (166)
.+|||..| .+++.+|+. .| + ..+.++...++.....+.. +.. ..|++|.|+ .++ +++.+++.++
T Consensus 96 ~~i~l~~~-~e~~~~R~~~~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Id~~~~~~---~~~~~~i~~~ 167 (173)
T 1e6c_A 96 TVVYLFAP-AEELALRLQASLQAHQRPTLTGRPIAEEMEAVLREREALYQ----DVAHYVVDATQPP---AAIVCELMQT 167 (173)
T ss_dssp EEEEEECC-HHHHHHHHHHHHCSCCCCCTTHHHHHHHHHHHHHHHHHHHH----HHCSEEEETTSCH---HHHHHHHHHH
T ss_pred eEEEEECC-HHHHHHHHhhccCCCCCCcCCCCCHHHHHHHHHHHHHHHHH----hCcEEEECCCCCH---HHHHHHHHHH
Confidence 68899986 899999998 66 2 1233445555554322221 111 258899888 578 8888888777
Q ss_pred HH
Q psy18086 141 GL 142 (166)
Q Consensus 141 i~ 142 (166)
+.
T Consensus 168 l~ 169 (173)
T 1e6c_A 168 MR 169 (173)
T ss_dssp TT
T ss_pred hc
Confidence 64
No 76
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=93.86 E-value=0.34 Score=35.56 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=44.9
Q ss_pred EEEEEeCCCHHHHHHHhhcCC------CCCHHHHHHHHHHHHHHhh-----cCCCCCCcccE-EEEcCCCCCCHhHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRG------TETEDSLRRRLDLARRDMS-----YGKDSLRSYGI-ISELAFFLEYNSAAGEI 136 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg------tetee~I~~Rl~~A~~e~~-----~~~~~~~~fD~-vIvNd~dl~~~e~a~~~ 136 (166)
.+||+..| .+++.+|+.+|+ .++.+.+++|+........ |.. .-++ +|.|+.++ ++..++
T Consensus 116 ~~i~l~~~-~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~----~~~~~~id~~~~~---~~v~~~ 187 (196)
T 1tev_A 116 FVLFFDCN-NEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEE----MGKVKKIDASKSV---DEVFDE 187 (196)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHTSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHH----TTCEEEEETTSCH---HHHHHH
T ss_pred EEEEEECC-HHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHHHh----cCCEEEEECCCCH---HHHHHH
Confidence 67888875 888999987653 2357778888765433221 222 1244 67777678 889999
Q ss_pred HHHHHHh
Q psy18086 137 FEHFGLK 143 (166)
Q Consensus 137 l~~ii~~ 143 (166)
+.+++..
T Consensus 188 i~~~l~~ 194 (196)
T 1tev_A 188 VVQIFDK 194 (196)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888754
No 77
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=93.84 E-value=0.6 Score=37.35 Aligned_cols=39 Identities=23% Similarity=0.128 Sum_probs=30.8
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCC--CCCHHHHHHHHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRG--TETEDSLRRRLDLARRD 106 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rg--tetee~I~~Rl~~A~~e 106 (166)
...+||+.+ |.+++.+|+.+|+ ..+++.|+++++..+..
T Consensus 106 ~~~~i~l~~-~~e~~~~R~~~R~~~~~~~e~i~~~~~~~~~~ 146 (301)
T 1ltq_A 106 KVEHKVFDV-PWTELVKRNSKRGTKAVPIDVLRSMYKSMREY 146 (301)
T ss_dssp EEEEEECCC-CHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHH
T ss_pred cEEEEEEEC-CHHHHHHHHHhccCCCCCHHHHHHHHHHHhcc
Confidence 347888887 5999999999886 35788899998876543
No 78
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=93.77 E-value=0.18 Score=39.30 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=15.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCC
Q psy18086 69 VYVFVKPPSIEELETRLRGRG 89 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg 89 (166)
.+||+..| .+++.+|+.+|+
T Consensus 108 ~vi~l~~~-~e~~~~Rl~~R~ 127 (223)
T 2xb4_A 108 FVIEILLP-REVAKNRIMGRR 127 (223)
T ss_dssp EEEEEECC-HHHHHHHHHTBC
T ss_pred EEEEEECC-HHHHHHHHHccc
Confidence 56777765 789999998886
No 79
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=93.55 E-value=0.85 Score=36.54 Aligned_cols=69 Identities=16% Similarity=0.055 Sum_probs=46.2
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC------CCHHHHHHHHHHHHHHh----hcCCCCCCcccEEEEc-CCCCCCHhHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT------ETEDSLRRRLDLARRDM----SYGKDSLRSYGIISEL-AFFLEYNSAAGEIF 137 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt------etee~I~~Rl~~A~~e~----~~~~~~~~~fD~vIvN-d~dl~~~e~a~~~l 137 (166)
.+|++..| .+++.+||.+|+. ++++.+++||+....+. +|-...+ -++.+| +++. ++.++++
T Consensus 135 ~vi~l~v~-~e~~~~Rl~~R~~~~~R~DD~~e~i~~Rl~~Y~~~t~pl~~~Y~~~~---~l~~Idg~~~~---eeV~~~I 207 (217)
T 3umf_A 135 CVINFDVS-EEVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHYKQQN---KVITIDASGTV---DAIFDKV 207 (217)
T ss_dssp EEEEEECC-HHHHHHHHSCC------CHHHHHHHHHHHHHHHHHTHHHHHHHHTTT---CEEEEETTSCH---HHHHHHH
T ss_pred EEEeccCC-HHHHHHHHhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC---CEEEEECCCCH---HHHHHHH
Confidence 57788876 8999999988853 46778999999776542 2222112 234444 4577 8888999
Q ss_pred HHHHHhh
Q psy18086 138 EHFGLKS 144 (166)
Q Consensus 138 ~~ii~~~ 144 (166)
.+++.+.
T Consensus 208 ~~~l~k~ 214 (217)
T 3umf_A 208 NHELQKF 214 (217)
T ss_dssp HHHHHTT
T ss_pred HHHHHHc
Confidence 9888653
No 80
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=93.39 E-value=0.02 Score=44.04 Aligned_cols=50 Identities=8% Similarity=0.024 Sum_probs=18.0
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHH----HH-HhhcCCCCCCcccEEEEcC
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLA----RR-DMSYGKDSLRSYGIISELA 124 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A----~~-e~~~~~~~~~~fD~vIvNd 124 (166)
.+|||.+| .++..+|+.+|. +++..|+..+ .. .+....... .+|+||.|+
T Consensus 146 ~~i~v~~~-~~~~~~R~~~R~----~~~~~~~~~~~~~~~~~y~~~~~~~~-~AD~vI~N~ 200 (201)
T 1rz3_A 146 FVVYLDCP-REIRFARENDQV----KQNIQKFINRYWKAEDYYLETEEPIK-RADVVFDMT 200 (201)
T ss_dssp EEEEECCC-------------------CHHHHHHHHHHHHHHHHHHHCHHH-HCSEEEC--
T ss_pred EEEEEeCC-HHHHHHHHhcCC----HHHHHHHHhheeHHHHHHhCCCCcHh-hCcEEecCC
Confidence 78999987 688888998886 4444555322 11 111110011 689999997
No 81
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=93.29 E-value=0.95 Score=34.83 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=16.2
Q ss_pred EEEEEeCCCHHHHHHHhhcCC
Q psy18086 69 VYVFVKPPSIEELETRLRGRG 89 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg 89 (166)
.+||+..| .+++.+|+..|+
T Consensus 114 ~vi~L~~~-~e~~~~Rl~~R~ 133 (217)
T 3be4_A 114 SVIYFEID-DSEIIERISGRC 133 (217)
T ss_dssp EEEEEECC-HHHHHHHHHTEE
T ss_pred EEEEEECC-HHHHHHHHHcCC
Confidence 67888886 889999998763
No 82
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=92.91 E-value=0.13 Score=40.75 Aligned_cols=69 Identities=9% Similarity=0.002 Sum_probs=44.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCC----CCCHHHHHHHHHHHH----HHh--hcCCCCCCcccEEE----EcCCCCCCHhHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRG----TETEDSLRRRLDLAR----RDM--SYGKDSLRSYGIIS----ELAFFLEYNSAAG 134 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg----tetee~I~~Rl~~A~----~e~--~~~~~~~~~fD~vI----vNd~dl~~~e~a~ 134 (166)
.+|||..| .+++.+|+..|. ..+.+++..++..-. .+. .+.. ..|++| .|+.++ ++..
T Consensus 153 ~vi~l~~~-~e~~~~R~~~R~~~~rg~~~e~i~~~~~~~~~~~~~~~i~~~~~----~ad~vI~~~id~~~s~---e~v~ 224 (252)
T 1uj2_A 153 MKLFVDTD-ADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKK----YADVIIPRGADNLVAI---NLIV 224 (252)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHTGGGGG----GCSEEEETGGGCHHHH---HHHH
T ss_pred eeEEEeCC-HHHHHHHHHHHHHhhhCCCHHHHHHHHHHhccHHHHHHhhhhhh----cCcEEEecCCCChhHH---HHHH
Confidence 67899986 788888887663 257888877766421 111 1222 568888 565567 7788
Q ss_pred HHHHHHHHhhh
Q psy18086 135 EIFEHFGLKSS 145 (166)
Q Consensus 135 ~~l~~ii~~~~ 145 (166)
+++.+++....
T Consensus 225 ~~I~~~l~~~~ 235 (252)
T 1uj2_A 225 QHIQDILNGGP 235 (252)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHccch
Confidence 88888776543
No 83
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=92.84 E-value=0.17 Score=39.70 Aligned_cols=69 Identities=14% Similarity=0.203 Sum_probs=33.3
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHH----HHHHHHHHHHHHh--hcC-CCCCCcccEEEEcCCCCCCHhHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETED----SLRRRLDLARRDM--SYG-KDSLRSYGIISELAFFLEYNSAAGEIFEHFG 141 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee----~I~~Rl~~A~~e~--~~~-~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii 141 (166)
.+||+..| .+++.+|+.+|++..+. +...|+...-.+. .|. ..+ .-.++|.+++++ ++..+++.+++
T Consensus 149 ~vi~Ld~~-~e~~~~Ri~~R~r~~e~~~~~~~~~rv~~~~~~~~~~~~~~~~--~~~~vId~~~~~---eev~~~I~~~l 222 (230)
T 2vp4_A 149 LIIYLRTS-PEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQS--CKVLVLDADLNL---ENIGTEYQRSE 222 (230)
T ss_dssp EEEEEECC-HHHHHHHHHHHCCGGGTTCCHHHHHHHHHHHHHHHTSCCSSCC--CEEEEEECCC----------------
T ss_pred EEEEEeCC-HHHHHHHHHHcCCcccccCcHHHHHHHHHHHHHHHHHhcccCC--CCEEEEECCCCH---HHHHHHHHHHH
Confidence 57888876 89999999877642221 5777887765443 221 111 123677777788 88888888877
Q ss_pred Hh
Q psy18086 142 LK 143 (166)
Q Consensus 142 ~~ 143 (166)
..
T Consensus 223 ~~ 224 (230)
T 2vp4_A 223 SS 224 (230)
T ss_dssp --
T ss_pred HH
Confidence 54
No 84
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=92.59 E-value=0.16 Score=37.74 Aligned_cols=28 Identities=25% Similarity=0.368 Sum_probs=20.5
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETEDSLR 97 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtetee~I~ 97 (166)
..+||+.+| .+++.+|+.+|+. +...+.
T Consensus 98 ~~vi~L~~~-~e~l~~R~~~r~~-~~~~~~ 125 (180)
T 3iij_A 98 HIVFVLRTD-TNVLYERLETRGY-NEKKLT 125 (180)
T ss_dssp SEEEEEECC-HHHHHHHHHHTTC-CHHHHH
T ss_pred CEEEEEECC-HHHHHHHHHHcCC-CHHHHH
Confidence 367888875 9999999999974 333343
No 85
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=92.42 E-value=0.47 Score=37.86 Aligned_cols=74 Identities=11% Similarity=0.020 Sum_probs=42.0
Q ss_pred eEEEEEeCCCHHHHHHHhhc-----CCCCCHHHHHHHHHHHHH-HhhcCCCCCC-ccc-EEEEcCC-CCCCHhHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRG-----RGTETEDSLRRRLDLARR-DMSYGKDSLR-SYG-IISELAF-FLEYNSAAGEIFE 138 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~-----Rgtetee~I~~Rl~~A~~-e~~~~~~~~~-~fD-~vIvNd~-dl~~~e~a~~~l~ 138 (166)
.+.|||..| .++..+|+.+ +...+.+++..++..-.. +......|.. ..| ++|.|++ ++ +++++++.
T Consensus 164 ~~~ifl~A~-~e~r~~R~~~~l~~~~~~~~~~~~~~~i~~rd~~~~~r~~~pl~~~~d~~~Idts~~~~---eev~~~I~ 239 (252)
T 4e22_A 164 PVKIFLDAS-SQERAHRRMLQLQERGFNVNFERLLAEIQERDNRDRNRSVAPLVPAADALVLDSTSMSI---EQVIEQAL 239 (252)
T ss_dssp SEEEEEECC-HHHHHHHHHHHHHHHTCCCCHHHHHHHHC------------CCCCCTTEEEEECSSSCH---HHHHHHHH
T ss_pred CEEEEEECC-HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhhccccchhccCCeEEEECcCCCH---HHHHHHHH
Confidence 467999986 7777666543 444577777666543211 1111111111 335 7777774 57 88888888
Q ss_pred HHHHhhh
Q psy18086 139 HFGLKSS 145 (166)
Q Consensus 139 ~ii~~~~ 145 (166)
+++....
T Consensus 240 ~~i~~~~ 246 (252)
T 4e22_A 240 AYAQRIL 246 (252)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8886543
No 86
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=92.23 E-value=0.089 Score=39.13 Aligned_cols=69 Identities=12% Similarity=-0.036 Sum_probs=41.5
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC-C--CHHHHHHHHHHHH--HHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT-E--TEDSLRRRLDLAR--RDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt-e--tee~I~~Rl~~A~--~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~ 142 (166)
.+|||.+| .+++.+|+..|.. . +.++...++..-. .+-.|.. ..|++|.|+ .++ +++.+++.+++.
T Consensus 96 ~vV~L~~~-~e~~~~Rl~~r~~r~~~~~~~~~~~i~~~~~~r~~~~~~----~~~~~Idt~~~s~---ee~~~~I~~~l~ 167 (184)
T 2iyv_A 96 TVVYLEIS-AAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRR----VATMRVDTNRRNP---GAVVRHILSRLQ 167 (184)
T ss_dssp CEEEEECC-HHHHHHHTTCCCCCSSTTSCCHHHHHHHHHHHHHHHHHH----HCSEEEECSSSCH---HHHHHHHHTTSC
T ss_pred eEEEEeCC-HHHHHHHHhCCCCCCCccCCCHHHHHHHHHHHHHHHHhc----cCCEEEECCCCCH---HHHHHHHHHHHh
Confidence 67899986 8999999988752 1 1111222222211 1112222 468899988 477 888888887775
Q ss_pred hhh
Q psy18086 143 KSS 145 (166)
Q Consensus 143 ~~~ 145 (166)
...
T Consensus 168 ~~~ 170 (184)
T 2iyv_A 168 VPS 170 (184)
T ss_dssp CCC
T ss_pred hcC
Confidence 443
No 87
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=91.51 E-value=1.3 Score=35.39 Aligned_cols=68 Identities=13% Similarity=0.145 Sum_probs=39.4
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCC-CHHHHHHHHHHHHHHhhcCCCC--CCcccEEEEcCC--CCCCHhHHHHHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTE-TEDSLRRRLDLARRDMSYGKDS--LRSYGIISELAF--FLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgte-tee~I~~Rl~~A~~e~~~~~~~--~~~fD~vIvNd~--dl~~~e~a~~~l~~ii~ 142 (166)
..+||+.+| .+++.+|+.+|+.. +++.++...... + ...... . ..+++|..++ ++ ++..++|.+.+.
T Consensus 101 ~~vi~l~~~-~e~~~~R~~~R~~~~~~~~l~~~~~~~--e-~~~~~~~~~-~~~~~Id~~~~~~~---~ei~~~I~~~l~ 172 (260)
T 3a4m_A 101 YAIIYLKAS-LDVLIRRNIERGEKIPNEVIKKMYEKF--D-EPGKKYKWD-EPFLIIDTTKDIDF---NEIAKKLIEKSK 172 (260)
T ss_dssp EEEEEEECC-HHHHHHHHHHTTCSSCHHHHHHHHHHC--C-CTTSSCGGG-CCSEEEETTSCCCH---HHHHHHHHHHHT
T ss_pred EEEEEEeCC-HHHHHHHHHhCCCCCCHHHHHHHHHHh--c-CccccCCCC-CCEEEEeCCCCCCH---HHHHHHHHhccc
Confidence 578888875 89999999988743 444444332211 1 000000 1 3578887774 34 666666666654
Q ss_pred h
Q psy18086 143 K 143 (166)
Q Consensus 143 ~ 143 (166)
.
T Consensus 173 ~ 173 (260)
T 3a4m_A 173 E 173 (260)
T ss_dssp S
T ss_pred C
Confidence 3
No 88
>3ch4_B Pmkase, phosphomevalonate kinase; parallel beta-sheet with the strand order 23145, walker A motif, cholesterol biosynthesis, lipid synthesis; 1.76A {Homo sapiens}
Probab=90.12 E-value=0.85 Score=36.72 Aligned_cols=64 Identities=13% Similarity=-0.102 Sum_probs=39.9
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
...+|.|..| .++=.+|...+....++ .+.|.....- . .+|++|+||+++ ++-.+++.+++...
T Consensus 127 ~~~iirI~as-~~~R~~Rg~~~~~~~Dd--------~esE~gL~~~-~-~~D~vI~Ndgt~---eel~~~v~~ll~~~ 190 (202)
T 3ch4_B 127 VTQTVRVVAL-EQSRQQRGWVFTPGVDD--------AESECGLDNF-G-DFDWVIENHGVE---QRLEEQLENLIEFI 190 (202)
T ss_dssp GEEEEEEEEC-HHHHHHTTCCCCTTTTT--------SHHHHTTTTC-C-CCSEEEEECSCH---HHHHHHHHHHHHHH
T ss_pred cEEEEEEECC-HHHHHHHhhhccccccc--------cccccCCCCC-C-cCCEEEEeCCCH---HHHHHHHHHHHHHH
Confidence 5778999874 67766776544332322 1123322221 1 689999999888 77777777776544
No 89
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=89.85 E-value=5.6 Score=30.67 Aligned_cols=117 Identities=8% Similarity=0.003 Sum_probs=58.8
Q ss_pred HHHHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCCCCH
Q psy18086 15 AAVEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGTETE 93 (166)
Q Consensus 15 ~~V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgtete 93 (166)
+.|...+++|++||+|=-.......... .++ . .-.+..... ...+|-.. -.+||+..| .++..+|..++.+...
T Consensus 73 ~~I~~~L~~g~~Vi~DRy~~S~~ayq~~~~~~-~-~~~i~~l~~-~~~~~~~P-Dl~i~Ld~~-~e~~~~R~~~~dr~e~ 147 (197)
T 3hjn_A 73 TEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNL-G-KEIVEELND-FATDGLIP-DLTFYIDVD-VETALKRKGELNRFEK 147 (197)
T ss_dssp HHHHHHHTTTCEEEEESCHHHHHHHHTTTTCS-C-HHHHHHHHH-HHHTTCCC-SEEEEEECC-HHHHHHHC---CTTCC
T ss_pred HHHHHHHHCCCeEEecccchHHHHHHHhccCC-C-HHHHHHHHh-hhhcCCCC-CceeecCcC-hHHHHHhCcCcCcccc
Confidence 4567778999999998655443333211 010 0 000000000 01122222 356777765 7888888776655444
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHh
Q psy18086 94 DSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 94 e~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~ 143 (166)
.+...|+..+-.++.... |. -++++|. .++ ++-.+++.+++.+
T Consensus 148 ~ef~~rv~~~y~~la~~~-~~---~~~~IDa~~~~---eeV~~~I~~~i~~ 191 (197)
T 3hjn_A 148 REFLERVREGYLVLAREH-PE---RIVVLDGKRSI---EEIHRDVVREVKR 191 (197)
T ss_dssp HHHHHHHHHHHHHHHHHC-TT---TEEEEETTSCH---HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhC-CC---CEEEEcCCCCH---HHHHHHHHHHHHH
Confidence 567777776644543221 11 2444443 466 6666777666643
No 90
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=89.56 E-value=0.46 Score=34.60 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=35.5
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC-------CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT-------ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEH 139 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt-------et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ 139 (166)
.+||+..| .+++.+|+.+|+. +. .+.++..+..... .|.. ..|++|.|+ .++ ++..+++.+
T Consensus 99 ~~i~l~~~-~~~l~~R~~~r~~r~~~~~~~~~~~~~~~~~~~r~~--~~~~----~a~~~id~~~~~~---~~~~~~i~~ 168 (173)
T 1kag_A 99 VVVYLETT-IEKQLARTQRDKKRPLLHVETPPREVLEALANERNP--LYEE----IADVTIRTDDQSA---KVVANQIIH 168 (173)
T ss_dssp EEEECCCC-HHHHHSCC------CCSSSSCCCHHHHHHHHHHHHH--HHHH----HCSEEC-----CH---HHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHHHHH--HHHh----hCCEEEECCCCCH---HHHHHHHHH
Confidence 57888875 8999999987631 12 4555554443221 1222 458899887 477 888888877
Q ss_pred HHH
Q psy18086 140 FGL 142 (166)
Q Consensus 140 ii~ 142 (166)
++.
T Consensus 169 ~l~ 171 (173)
T 1kag_A 169 MLE 171 (173)
T ss_dssp HHC
T ss_pred HHH
Confidence 764
No 91
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=89.39 E-value=0.85 Score=34.63 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=39.0
Q ss_pred eEEEEEeCCCHHHHHHH----hhcCCC-CCHHHHHHHHHHHH-HHhhcCCCCCCccc--EEEEcC-CCCCCHhHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETR----LRGRGT-ETEDSLRRRLDLAR-RDMSYGKDSLRSYG--IISELA-FFLEYNSAAGEIFE 138 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~R----L~~Rgt-etee~I~~Rl~~A~-~e~~~~~~~~~~fD--~vIvNd-~dl~~~e~a~~~l~ 138 (166)
.++||+.+| .+++.+| +..|+. .+.++...++..-. .++.....|...++ ++|.|+ .++ ++..+++.
T Consensus 142 d~~i~l~~~-~e~~~~R~~~~l~~rg~~~~~~~~~~~i~~R~~~~~~~~~~pl~~~~~~~~Id~~~~~~---~ev~~~I~ 217 (227)
T 1cke_A 142 PVKIFLDAS-SEERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSI---EQVIEKAL 217 (227)
T ss_dssp SEEEEEECC-HHHHHHHHHHHHHHHTCCCCHHHHHHHHC-------------CCCCTTCEEEETTTSCH---HHHHHHHH
T ss_pred CEEEEEeCC-HHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHhhhhhcccCccCCCCEEEEeCCCCCH---HHHHHHHH
Confidence 478999986 7777777 435663 24555444443210 01100001111222 778887 578 88888888
Q ss_pred HHHHh
Q psy18086 139 HFGLK 143 (166)
Q Consensus 139 ~ii~~ 143 (166)
+++..
T Consensus 218 ~~l~~ 222 (227)
T 1cke_A 218 QYARQ 222 (227)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 92
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=89.23 E-value=0.076 Score=40.13 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=34.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCC-------CC---HHHHHHHHHHHHHHhhcCCCCCCccc-EEEEcCCCCCCHhHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGT-------ET---EDSLRRRLDLARRDMSYGKDSLRSYG-IISELAFFLEYNSAAGEIF 137 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgt-------et---ee~I~~Rl~~A~~e~~~~~~~~~~fD-~vIvNd~dl~~~e~a~~~l 137 (166)
.+||+..| .+++.+|+.+|+. +. .+++..|+...-.++.... + ..+ ++|.|++++ ++..+++
T Consensus 135 ~~i~l~~~-~~~~~~R~~~R~~~~~~~~~d~~e~~~~~~~~~~~~~~~~~~~~-~--~~~~~vId~~~~~---~~v~~~i 207 (214)
T 1gtv_A 135 WQVLLAVS-AELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQG-W--GGRWLVVGADVDP---GRLAATL 207 (214)
T ss_dssp EEEEEEEE-HHHHHHHHHHHHHEBBEEEEEEEEEEHHHHHHHHHHHHHHHHEE-E--EEEEEEEEEEEBH---HHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHhC-C--CCCEEEEeCCCCH---HHHHHHh
Confidence 45666654 6899999988753 11 2567777766544443211 0 134 556666566 5554443
No 93
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=88.99 E-value=0.32 Score=44.04 Aligned_cols=98 Identities=16% Similarity=0.188 Sum_probs=54.2
Q ss_pred HHHHHHhcCCcEEEEeC---HHHHHHHHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCCC-
Q psy18086 16 AVEAVINSGKTCVLDIE---VQGVQQVKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGTE- 91 (166)
Q Consensus 16 ~V~~v~~~Gk~~vldid---~~Gv~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgte- 91 (166)
.++.++++|..+|+|.. ..+...++.. +.. ...++|||.+| .+++.+|++ |+..
T Consensus 436 ~~~~~l~~G~~VI~d~~~~~~~~r~~~~~~---l~~-----------------~d~~vV~L~~~-~e~~~~Rl~-r~~~~ 493 (546)
T 2gks_A 436 VASEIVKHNGVVICALVSPYRSARNQVRNM---MEE-----------------GKFIEVFVDAP-VEVCEERDV-KGLYK 493 (546)
T ss_dssp HHHHHHHTTCEEEEECCCCCHHHHHHHHTT---SCT-----------------TCEEEEEEECC-GGGHHHHCC-SSHHH
T ss_pred HHHHHHhCCCEEEEEcCCCCHHHHHHHHHH---hhc-----------------CCEEEEEEeCC-HHHHHHHhh-ccccc
Confidence 34556789999999842 1222334433 220 13588999985 899999987 3311
Q ss_pred --CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHh
Q psy18086 92 --TEDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 92 --tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~ 143 (166)
..+.|+..+. ....|.. +. ..|++|.|+ .++ +++.+++.+++..
T Consensus 494 ~~~~~~i~~~~~---vr~~~e~-~~-~adivIDts~~s~---eev~~~I~~~L~~ 540 (546)
T 2gks_A 494 KAKEGLIKGFTG---VDDPYEP-PV-APEVRVDTTKLTP---EESALKILEFLKK 540 (546)
T ss_dssp HC------CCBT---TTBCCCC-CS-SCSEEEETTTSCH---HHHHHHHHHHHHH
T ss_pred cccHHHHHHHHh---hhhcccc-cc-CCcEEEECCCCCH---HHHHHHHHHHHHH
Confidence 1111110000 0001111 12 468999986 478 8888888888754
No 94
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=88.92 E-value=3.8 Score=31.21 Aligned_cols=66 Identities=20% Similarity=0.028 Sum_probs=41.1
Q ss_pred EEEEEeCCCHHHHHHHhhcCC---------------------------------CCCHHHHHHHHHHHHHHhh-----cC
Q psy18086 69 VYVFVKPPSIEELETRLRGRG---------------------------------TETEDSLRRRLDLARRDMS-----YG 110 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg---------------------------------tetee~I~~Rl~~A~~e~~-----~~ 110 (166)
.+||+..| .+++.+|+..|+ .++++.++.|+........ |.
T Consensus 114 ~vi~L~~~-~e~~~~R~~~r~~~~~~g~~y~~~~~pp~~~~~d~~~~~~l~~r~dd~~~~~~~rl~~~~~~~~~l~~~y~ 192 (220)
T 1aky_A 114 KAIELKVD-DELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQTEPIVDFYK 192 (220)
T ss_dssp EEEEEECC-HHHHHHHHHTEEECTTTCCEEETTTBCCSSTTBCTTTCCBCBCCTTCSHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHhCCCccCccCCccccccCCCcccccccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888876 889999987652 2456788999876543321 21
Q ss_pred CCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHH
Q psy18086 111 KDSLRSYGIISELA-FFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 111 ~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~ 142 (166)
. .+ .++.+|. .++ ++.++++.+++.
T Consensus 193 ~-~~---~~~~id~~~~~---~~v~~~i~~~l~ 218 (220)
T 1aky_A 193 K-TG---IWAGVDASQPP---ATVWADILNKLG 218 (220)
T ss_dssp H-HT---CEEEEETTSCH---HHHHHHHHHHHT
T ss_pred h-CC---CEEEEECCCCH---HHHHHHHHHHHh
Confidence 1 01 2344443 366 777777777664
No 95
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=88.28 E-value=1.4 Score=32.54 Aligned_cols=67 Identities=12% Similarity=0.028 Sum_probs=38.2
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHh-h-cCCCCCCcccEEEEcCC-CCCCHhHHHHHHHHHHHh
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDM-S-YGKDSLRSYGIISELAF-FLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~-~-~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~ii~~ 143 (166)
..+||+..| .+++.+|+.+|. .++.-..++... ..+ . +. .+. ..|++|.|++ ++ ++..+++.+++..
T Consensus 106 ~~~i~l~~~-~e~~~~R~~~~~--~~~~~~~~~~~~-~~~~~~~~-~~~-~ad~vid~~~~~~---~~~~~~i~~~l~~ 175 (179)
T 2pez_A 106 FFEVFVDAP-LHVCEQRDVKGL--YKKARAGEIKGF-TGIDSEYE-KPE-APELVLKTDSCDV---NDCVQQVVELLQE 175 (179)
T ss_dssp EEEEEEECC-HHHHHHHCTTSH--HHHHHTTSSCSC-BTTTBCCC-CCS-SCSEEEETTTSCH---HHHHHHHHHHHHH
T ss_pred eEEEEEeCC-HHHHHHHHhhhh--HHHHhccccccc-ccCCcccc-CCC-CCcEEEECCCCCH---HHHHHHHHHHHHH
Confidence 367888886 899999987541 111111111100 001 1 11 122 5789999984 67 8888888877753
No 96
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=88.20 E-value=3.8 Score=30.26 Aligned_cols=24 Identities=21% Similarity=0.180 Sum_probs=17.0
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCC
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTE 91 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgte 91 (166)
...++++. ||.++|.+|+..|..+
T Consensus 102 ~~~~i~L~-~~~e~l~~R~~~r~~d 125 (189)
T 2bdt_A 102 EIRFIILW-TNREELLRRDALRKKD 125 (189)
T ss_dssp EEEEEEEE-CCHHHHHHHTTTSCC-
T ss_pred CeEEEEEe-CCHHHHHHHHHhcccc
Confidence 34455555 5699999999988753
No 97
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=87.97 E-value=1.3 Score=34.77 Aligned_cols=67 Identities=16% Similarity=0.114 Sum_probs=45.9
Q ss_pred EEEEEeCCCHHHHHHHhhcCC--------------------------CCCHHHHHHHHHHHHHHh----hcCCCCCCccc
Q psy18086 69 VYVFVKPPSIEELETRLRGRG--------------------------TETEDSLRRRLDLARRDM----SYGKDSLRSYG 118 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg--------------------------tetee~I~~Rl~~A~~e~----~~~~~~~~~fD 118 (166)
.+|++..| .+++.+|+.+|. .++++.|++||+....+. +|-...+ -
T Consensus 106 ~vi~l~v~-~e~l~~Rl~~R~~~~~~g~~y~~~~~pp~~g~~l~~r~DD~~e~i~~Rl~~Y~~~t~pl~~~Y~~~~---~ 181 (206)
T 3sr0_A 106 HVLLFEVP-DEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKG---I 181 (206)
T ss_dssp EEEEEECC-HHHHHHHHHTEEECTTTCCEEETTTBCCCTTCCCBCCGGGSHHHHHHHHHHHHHHTTHHHHHHHTTT---C
T ss_pred eeeecCCC-HHHHHHHHhCCccccCCCceeeeeccCCCCCceecccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 56778876 788999998762 357899999999886643 2222112 2
Q ss_pred EEEEc-CCCCCCHhHHHHHHHHHHH
Q psy18086 119 IISEL-AFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 119 ~vIvN-d~dl~~~e~a~~~l~~ii~ 142 (166)
++.+| ++++ ++.++++.++|.
T Consensus 182 l~~Idg~~~~---~eV~~~I~~~l~ 203 (206)
T 3sr0_A 182 LRIIDASKPV---EEVYRQVLEVIG 203 (206)
T ss_dssp EEEEETTSCH---HHHHHHHHHHHC
T ss_pred EEEEECCCCH---HHHHHHHHHHHc
Confidence 34444 4577 888888888874
No 98
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=87.63 E-value=2.7 Score=31.58 Aligned_cols=71 Identities=18% Similarity=0.155 Sum_probs=38.5
Q ss_pred EEEEEeCCCHHHHHHHhhc----CCCCCHHHHHHHHH-HHHHHh-hcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRG----RGTETEDSLRRRLD-LARRDM-SYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~----Rgtetee~I~~Rl~-~A~~e~-~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~ 142 (166)
.+||+.+|+...+.+++.. +| .|...+..++. ...... .+-.......|++|.|+++. ..+.+.+..-+.
T Consensus 127 ~~i~ld~~~~~~~~r~l~r~~~~~g-~t~~~~~~~~~~~~~~~~~~~~~~~~~~aD~ii~~~~~~---~~~~~~~~~~i~ 202 (211)
T 3asz_A 127 LKVFVDADADERFIRRLKRDVLERG-RSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQN---PVALEMLAAKAL 202 (211)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEESTTSC---HHHHHHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHhhhhhHHHhcccchhcCeEEEeCCCcc---hHHHHHHHHHHH
Confidence 5788998866666665532 45 35555544432 221111 11110011679999999775 666666655554
Q ss_pred h
Q psy18086 143 K 143 (166)
Q Consensus 143 ~ 143 (166)
.
T Consensus 203 ~ 203 (211)
T 3asz_A 203 A 203 (211)
T ss_dssp H
T ss_pred H
Confidence 3
No 99
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=87.63 E-value=0.67 Score=40.10 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=15.6
Q ss_pred ceEEEEEeCCCHHHHHHHhhcC
Q psy18086 67 GAVYVFVKPPSIEELETRLRGR 88 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~R 88 (166)
.+.+|++ +|+.++|.+||..|
T Consensus 174 ~~~~i~L-~~~re~L~~RI~~R 194 (339)
T 3a8t_A 174 DCCFLWV-DVSVKVLTDYLAKR 194 (339)
T ss_dssp EEEEEEE-ECCHHHHHHHHHHH
T ss_pred CeEEEEE-eCCHHHHHHHHHhh
Confidence 3444444 55799999999988
No 100
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=87.38 E-value=1.1 Score=34.96 Aligned_cols=26 Identities=15% Similarity=-0.003 Sum_probs=22.4
Q ss_pred cccEEEEcCCCCCCHhHHHHHHHHHHHhh
Q psy18086 116 SYGIISELAFFLEYNSAAGEIFEHFGLKS 144 (166)
Q Consensus 116 ~fD~vIvNd~dl~~~e~a~~~l~~ii~~~ 144 (166)
..|++|.|++++ +...+++.+++...
T Consensus 162 ~AD~vI~n~~~~---~~l~~~v~~~~~~l 187 (192)
T 2grj_A 162 PQGIVVANNSTL---EDLEKKVEEVMKLV 187 (192)
T ss_dssp CCSEEEECSSCH---HHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCH---HHHHHHHHHHHHHH
Confidence 679999999899 99999999887654
No 101
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=85.96 E-value=0.55 Score=35.57 Aligned_cols=66 Identities=11% Similarity=-0.162 Sum_probs=38.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHH----H-HHHhh-cCCCCCCcccE--EEEcCCCCCCHhHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETEDSLRRRLDL----A-RRDMS-YGKDSLRSYGI--ISELAFFLEYNSAAGEIFEHF 140 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~----A-~~e~~-~~~~~~~~fD~--vIvNd~dl~~~e~a~~~l~~i 140 (166)
.+||+..| .++..+|+..|+.+. +++..++.. . ..... +.. ..|. +|.|++++ ++.++++.++
T Consensus 132 ~~i~l~~~-~~~~~~R~~~R~~~~-e~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~Id~~~~~---eev~~~I~~~ 202 (207)
T 2qt1_A 132 RSYFLTIP-YEECKRRRSTRVYQP-PDSPGYFDGHVWPMYLKYRQEMQD----ITWEVVYLDGTKSE---EDLFLQVYED 202 (207)
T ss_dssp EEEEEECC-HHHHHHHHHHSCCSS-CCCTTHHHHTHHHHHHHHHHHGGG----CSSCCEEEETTSCH---HHHHHHHHHH
T ss_pred eeEEEECC-HHHHHHHHHHcCCCc-cchHHHHHHHHhHHHHHHHHHHHh----cCCeEEEecCCCCH---HHHHHHHHHH
Confidence 67888876 788888887786432 222222321 1 11111 122 2343 47888788 9999988888
Q ss_pred HHh
Q psy18086 141 GLK 143 (166)
Q Consensus 141 i~~ 143 (166)
+..
T Consensus 203 l~~ 205 (207)
T 2qt1_A 203 LIQ 205 (207)
T ss_dssp HTT
T ss_pred HHh
Confidence 753
No 102
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=85.52 E-value=2.3 Score=31.19 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=40.9
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCC---C--CC-HHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRG---T--ET-EDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEH 139 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rg---t--et-ee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ 139 (166)
...+||+..| .+++.+|+.+|. + .. .+.++..+.... . .|.. ..|++|.++ .++ +++.+++.+
T Consensus 93 ~~~~i~l~~~-~e~~~~R~~~r~~~~r~~~~~~~~i~~~~~~r~-~-~y~~----~~~~~Idt~~~~~---eev~~~I~~ 162 (175)
T 1via_A 93 AGFCIYLKAD-FEYLKKRLDKDEISKRPLFYDEIKAKKLYNERL-S-KYEQ----KANFILNIENKNI---DELLSEIKK 162 (175)
T ss_dssp GCEEEEEECC-HHHHTTCCCGGGTTTSCTTCCHHHHHHHHHHHH-H-HHHH----HCSEEEECTTCCH---HHHHHHHHH
T ss_pred CCEEEEEeCC-HHHHHHHHhcccCCCCCCcccHHHHHHHHHHHH-H-HHHh----cCCEEEECCCCCH---HHHHHHHHH
Confidence 3578999875 899999987662 1 11 444544433221 1 1222 358888887 367 888888877
Q ss_pred HHH
Q psy18086 140 FGL 142 (166)
Q Consensus 140 ii~ 142 (166)
++.
T Consensus 163 ~l~ 165 (175)
T 1via_A 163 VIK 165 (175)
T ss_dssp HHC
T ss_pred HHH
Confidence 764
No 103
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=85.39 E-value=0.99 Score=36.10 Aligned_cols=23 Identities=13% Similarity=-0.031 Sum_probs=20.0
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCC
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRG 89 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rg 89 (166)
.+.+||+.+|+.+++.+|+.+|.
T Consensus 117 ~~~~i~l~~~~~e~l~~Rl~~R~ 139 (253)
T 2ze6_A 117 QWHVKRLRLGDSDAFLTRAKQRV 139 (253)
T ss_dssp EEEEEECCCCCHHHHHHHHHHHH
T ss_pred ceEEEEecchhHHHHHHHHHHHH
Confidence 46889999998899999999885
No 104
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=84.47 E-value=6.2 Score=30.45 Aligned_cols=68 Identities=16% Similarity=0.090 Sum_probs=44.0
Q ss_pred EEEEEeCCCHHHHHHHhhcCC---------------------------------CCCHHHHHHHHHHHHHH----hh-cC
Q psy18086 69 VYVFVKPPSIEELETRLRGRG---------------------------------TETEDSLRRRLDLARRD----MS-YG 110 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg---------------------------------tetee~I~~Rl~~A~~e----~~-~~ 110 (166)
.+||+..| .+++.+|+..|. .++++.+++|+...... ++ |.
T Consensus 125 ~vi~L~~~-~e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~r~d~~~~~~~~r~~~y~~~~~~~~~~y~ 203 (233)
T 1ak2_A 125 SVIEFSIP-DSLLIRRITGRLIHPQSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNKKALKIRLEAYHTQTTPLVEYYS 203 (233)
T ss_dssp EEEEEECC-HHHHHHHHHTCEECTTTCCEEBTTTBCCSSTTBCTTTCCBCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHcCCcCCccCCccccccCCCccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888875 899999997762 13577889998754332 11 22
Q ss_pred CCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHh
Q psy18086 111 KDSLRSYGIISELAFFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 111 ~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~ 143 (166)
. . ...++|..+.++ ++.++++.+++..
T Consensus 204 ~-~--~~~~~id~~~~~---~~v~~~I~~~l~~ 230 (233)
T 1ak2_A 204 K-R--GIHSAIDASQTP---DVVFASILAAFSK 230 (233)
T ss_dssp H-T--TCEEEEETTSCH---HHHHHHHHHHHHH
T ss_pred h-c--CCEEEEECCCCH---HHHHHHHHHHHHh
Confidence 1 1 124555555577 8888888887754
No 105
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=83.85 E-value=7.4 Score=30.10 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=25.1
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCCCH----HHHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTETE----DSLRRRLDLARRD 106 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgtete----e~I~~Rl~~A~~e 106 (166)
.+||+.+| .+++.+|+.+|+...+ .+...++..+-.+
T Consensus 152 ~~i~l~~~-~~~~~~R~~~R~r~~e~~~~~~~~~~v~~~y~~ 192 (241)
T 2ocp_A 152 GFIYLQAS-PQVCLKRLYQRAREEEKGIELAYLEQLHGQHEA 192 (241)
T ss_dssp EEEEEECC-HHHHHHHHHHSCCTTTTTCCHHHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHhcCCcccccCCHHHHHHHHHHHHH
Confidence 67888886 8999999988875221 3455666655443
No 106
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=81.97 E-value=8 Score=30.39 Aligned_cols=70 Identities=9% Similarity=-0.036 Sum_probs=40.5
Q ss_pred EEEEEeCCCHHHHHHHhhcCCCC----CHHHHHHHHHHHHHHh-h-------cCCCCCCcccEEEEcCCCCCCHhHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRGTE----TEDSLRRRLDLARRDM-S-------YGKDSLRSYGIISELAFFLEYNSAAGEI 136 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rgte----tee~I~~Rl~~A~~e~-~-------~~~~~~~~fD~vIvNd~dl~~~e~a~~~ 136 (166)
.+||+..| .+++.+|+.+|++. .+.+...++.....+. . |..-.. ...++|..+.++ ++..++
T Consensus 177 ~vi~L~~~-~e~~~~Ri~~R~r~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~-~~~~~Id~~~~~---eev~~~ 251 (263)
T 1p5z_B 177 GIIYLQAT-PETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQE-VPILTLDVNEDF---KDKYES 251 (263)
T ss_dssp EEEEEECC-HHHHHHHHHHHCCGGGTTCCHHHHHHHHHHHHHHHTTCCCCCSCGGGGG-SCEEEEECCSCH---HHHHHH
T ss_pred eEEEEECC-HHHHHHHHHhcCCccccCccHHHHHHHHHHHHHHHhhccchhhhhhhcc-CCEEEEECCCCH---HHHHHH
Confidence 57888886 89999999877642 1234445555443322 1 100000 113455555577 888888
Q ss_pred HHHHHHh
Q psy18086 137 FEHFGLK 143 (166)
Q Consensus 137 l~~ii~~ 143 (166)
+.+.+..
T Consensus 252 I~~~l~~ 258 (263)
T 1p5z_B 252 LVEKVKE 258 (263)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887754
No 107
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=81.62 E-value=10 Score=28.62 Aligned_cols=63 Identities=17% Similarity=0.117 Sum_probs=36.4
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHH----h--hcCCCCCCcccEEEEcCC-CCCCHhHHHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARRD----M--SYGKDSLRSYGIISELAF-FLEYNSAAGEIFEHF 140 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e----~--~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~i 140 (166)
..+||+..| .+++.+|+ .|. +..+......+ + .|. .+. ..|++|.+++ ++ ++..+++.++
T Consensus 133 ~~vi~Ld~~-~e~~~~R~-~r~------~~~~~r~~~~~~~~~~~~~y~-~~~-~~~~~IDt~~~s~---eev~~~I~~~ 199 (211)
T 1m7g_A 133 FVEVYVDVP-VEVAEQRD-PKG------LYKKAREGVIKEFTGISAPYE-APA-NPEVHVKNYELPV---QDAVKQIIDY 199 (211)
T ss_dssp EEEEEEECC-HHHHHTSC-TTC------HHHHHHHTSSSSCBTTTBCCC-CCS-SCSEEEECSSSCH---HHHHHHHHHH
T ss_pred eEEEEEeCC-HHHHHHhh-hHH------HHHHHHhcchhhhhhhhhhcc-CCC-CCeEEEECCCCCH---HHHHHHHHHH
Confidence 477888875 89998886 221 11111111000 0 111 112 4578888886 77 8888888888
Q ss_pred HHh
Q psy18086 141 GLK 143 (166)
Q Consensus 141 i~~ 143 (166)
+..
T Consensus 200 l~~ 202 (211)
T 1m7g_A 200 LDT 202 (211)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 108
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=80.01 E-value=14 Score=29.47 Aligned_cols=115 Identities=9% Similarity=-0.037 Sum_probs=51.6
Q ss_pred HHHHHhcCCcEEEEeCHHHHHHHHHh-hccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcCCCCCH--
Q psy18086 17 VEAVINSGKTCVLDIEVQGVQQVKRA-GGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGRGTETE-- 93 (166)
Q Consensus 17 V~~v~~~Gk~~vldid~~Gv~~lk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~Rgtete-- 93 (166)
|+..+++|++||+|=-.......... .|+ . .-.+. +.-+.+-|-.. -.+||+..| .++..+|+ +|++...
T Consensus 100 I~paL~~g~~VI~DRy~~S~~Ayq~~~~g~-~-~~~~~--~l~~~~~~~~P-Dl~I~Ldv~-~e~~~~Ri-~rdr~E~~~ 172 (223)
T 3ld9_A 100 IKPSLMQKKIVICDRFIDSTIAYQGYGQGI-D-CSLID--QLNDLVIDVYP-DITFIIDVD-INESLSRS-CKNGYEFAD 172 (223)
T ss_dssp HHHHHHTTCEEEEESCHHHHHHHHTTTTCC-C-HHHHH--HHHHHHCSSCC-SEEEEEECC------------------C
T ss_pred HHHHHhcCCeEEEccchhhHHHhccccCCc-c-HHHHH--HHHHHhhcCCC-CeEEEEeCC-HHHHHHHh-ccCccccch
Confidence 56677899999998766544433211 010 0 00000 11111222122 267777765 68888888 5544222
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhh
Q psy18086 94 DSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSS 145 (166)
Q Consensus 94 e~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~ 145 (166)
.+...|+..+-.++.... + .-.++|.++.++ ++. +++.+++....
T Consensus 173 ~e~~~rv~~~y~~la~~~-~--~~~~vIDa~~si---eeV-~~I~~~l~~~l 217 (223)
T 3ld9_A 173 MEFYYRVRDGFYDIAKKN-P--HRCHVITDKSET---YDI-DDINFVHLEVI 217 (223)
T ss_dssp HHHHHHHHHHHHHHHHHC-T--TTEEEEESSCSS---SCC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC-C--CCEEEEcCCCCH---HHH-HHHHHHHHHHH
Confidence 456777776644442111 1 225677777788 666 77777665543
No 109
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=76.73 E-value=17 Score=29.18 Aligned_cols=74 Identities=11% Similarity=0.076 Sum_probs=41.7
Q ss_pred ceEEEEEeCCCHHHHHHHhhc-----CCCCCHHHHHHHHHHHH-HHhhcCCCCCCccc--EEEEcCCCCCCHhHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRG-----RGTETEDSLRRRLDLAR-RDMSYGKDSLRSYG--IISELAFFLEYNSAAGEIFE 138 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~-----Rgtetee~I~~Rl~~A~-~e~~~~~~~~~~fD--~vIvNd~dl~~~e~a~~~l~ 138 (166)
.++-|||.+| .++=.+|..+ +...+.+++...+..-. .+......|...+| ++|.++ ++ -.+++.+.+.
T Consensus 146 a~lkifl~A~-~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~pl~~~~dal~IDTs-~l-~iee~v~~I~ 222 (233)
T 3r20_A 146 ADVKIFLTAS-AEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPLRAADDALVVDTS-DM-DQAQVIAHLL 222 (233)
T ss_dssp CSEEEEEECC-HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHSCSSCCSCCTTSEEEECT-TS-CHHHHHHHHH
T ss_pred CCEEEEEECC-HHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhhhccccccccccCcEEEECC-CC-CHHHHHHHHH
Confidence 4588999996 6665555432 22347777766665433 23332223444566 777777 43 1266667666
Q ss_pred HHHHh
Q psy18086 139 HFGLK 143 (166)
Q Consensus 139 ~ii~~ 143 (166)
+++..
T Consensus 223 ~~i~~ 227 (233)
T 3r20_A 223 DLVTA 227 (233)
T ss_dssp HHC--
T ss_pred HHHHH
Confidence 66643
No 110
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=76.53 E-value=5.1 Score=32.81 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=32.8
Q ss_pred EEEEEeCCCHHHHHHHhhcCC-------------------CCCHHHHHHHHHHH-HH-----H----hhcCCCCCCcccE
Q psy18086 69 VYVFVKPPSIEELETRLRGRG-------------------TETEDSLRRRLDLA-RR-----D----MSYGKDSLRSYGI 119 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg-------------------tetee~I~~Rl~~A-~~-----e----~~~~~~~~~~fD~ 119 (166)
..|||.+| .++..+|+.+|. .-|++++..++..- .. . ..... ..|+
T Consensus 217 ~~i~V~~~-~~~~~~R~~~R~~~~r~~~~r~~~~~~~~~~g~s~e~a~~~i~~q~~~~~~~~~~~~i~~~~~----~AD~ 291 (308)
T 1sq5_A 217 FSIYVDAP-EDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRE----RASL 291 (308)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHHHHTTTTCTTSTTHHHHTSCHHHHHHHHHHHHHHTHHHHHHHTTGGGGG----GCSE
T ss_pred EEEEEECC-HHHHHHHHHHHHHHHHHhhccCCchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHHcccccc----cCcE
Confidence 67999987 566666665551 24888888887641 10 1 11222 6799
Q ss_pred EEEcCC
Q psy18086 120 ISELAF 125 (166)
Q Consensus 120 vIvNd~ 125 (166)
||.|++
T Consensus 292 vI~n~~ 297 (308)
T 1sq5_A 292 ILTKSA 297 (308)
T ss_dssp EEEECG
T ss_pred EEEeCC
Confidence 999984
No 111
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=75.27 E-value=2.3 Score=34.64 Aligned_cols=37 Identities=24% Similarity=0.532 Sum_probs=29.7
Q ss_pred EEEEEeCCCHHHHHHHhhcCC---------------------------------CCCHHHHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGRG---------------------------------TETEDSLRRRLDLARRD 106 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg---------------------------------tetee~I~~Rl~~A~~e 106 (166)
.+||+..| .+++.+||.+|+ .++++.|++||+.....
T Consensus 113 ~VI~Ldvp-~e~l~~Rl~~R~~~~~~G~~Yh~~~~pp~~~~~~d~~g~~L~~R~DD~~e~i~~Rl~~y~~~ 182 (230)
T 3gmt_A 113 YVLEIDVP-FSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVTGEPLVQRDDDKEETVKKRLDVYEAQ 182 (230)
T ss_dssp EEEEECCC-HHHHHHHHHTEEEETTTTEEEETTTBCCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHcCCcccccCCcccccCCCCCccCcCCCccCccccCCCCCHHHHHHHHHHHHHH
Confidence 57888886 789999998874 24789999999987654
No 112
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=73.40 E-value=1.4 Score=36.19 Aligned_cols=31 Identities=23% Similarity=0.120 Sum_probs=20.6
Q ss_pred EEEEEeCCCHHHHHHHhh----cCCCCCHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLR----GRGTETEDSLRRR 99 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~----~Rgtetee~I~~R 99 (166)
..|||.||+...+++|+. +||...++.++..
T Consensus 150 ~~IfV~a~~~~rl~Rrl~Rd~~~RG~s~e~v~~~i 184 (290)
T 1a7j_A 150 LKIGVVPVINLEWIQKIHRDRATRGYTTEAVTDVI 184 (290)
T ss_dssp EEEEEEECHHHHHHHHHHHTSSSCCSCCCCHHHHH
T ss_pred EEEEEECCHHHHHHHHhhhhhhhcCCChHHHHHHH
Confidence 789999997777877764 3575444444433
No 113
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=72.89 E-value=4.7 Score=31.48 Aligned_cols=70 Identities=10% Similarity=0.108 Sum_probs=34.7
Q ss_pred EEEEEeCCCHHHHHHHhhcC---CCCCHHHHHHHHHH-HHHHhh-cCCCCCCcccEEE----EcCCCCCCHhHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGR---GTETEDSLRRRLDL-ARRDMS-YGKDSLRSYGIIS----ELAFFLEYNSAAGEIFEH 139 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R---gtetee~I~~Rl~~-A~~e~~-~~~~~~~~fD~vI----vNd~dl~~~e~a~~~l~~ 139 (166)
..|||..+....+.+|+..+ | .+.+++..++.. .+.... +-...-...|++| .|+.++ +...+++.+
T Consensus 156 ~~i~v~th~~~~~~r~~~r~~~~G-~~~e~~~~~~~~~~~~~~~~~i~p~~~~aD~vi~~~~dn~~~~---~~l~~~i~~ 231 (245)
T 2jeo_A 156 LRLFVDTDSDVRLSRRVLRDVRRG-RDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAI---NLIVQHIQD 231 (245)
T ss_dssp EEEEEECCHHHHHHHHHHHHTC----CHHHHHHHHHHTHHHHHHHHTGGGGGGCSEEEESSTTCHHHH---HHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHcC-CCHHHHHHHHHHhhhHhHHHhCCcchhcceEEEcCCCCccHHH---HHHHHHHHH
Confidence 56777776545555554432 5 478888776653 211111 1000011678998 343345 555555555
Q ss_pred HHH
Q psy18086 140 FGL 142 (166)
Q Consensus 140 ii~ 142 (166)
++.
T Consensus 232 ~~~ 234 (245)
T 2jeo_A 232 ILN 234 (245)
T ss_dssp HHH
T ss_pred HHh
Confidence 553
No 114
>4f6r_C Stathmin-like domain R1; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, subtilisin, tubulin; HET: GTP GDP MES; 2.64A {Artificial gene}
Probab=72.17 E-value=3.7 Score=29.44 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=26.3
Q ss_pred hhhhccCCCCceEEEEEeCCCHHHHHHHhhc---CCCCCHHHHHHHHHHHHH
Q psy18086 57 QVKRAGGAMAGAVYVFVKPPSIEELETRLRG---RGTETEDSLRRRLDLARR 105 (166)
Q Consensus 57 ~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~---Rgtetee~I~~Rl~~A~~ 105 (166)
+-|++|| .++=|.++|||.+.--.++.. +..-|-++|++.|..|+.
T Consensus 8 l~KrasG---qafEvILkpps~~~~~~~~~s~Pkkk~~SleeIqkKLeAAeE 56 (87)
T 4f6r_C 8 LNKATSG---QSWEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEE 56 (87)
T ss_dssp -CEETTE---EEEEEEEECCCC---------------CTHHHHHHHHHHHHH
T ss_pred hcccCCC---cceEEEecCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3456666 567788999997543333321 234689999999999953
No 115
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=70.84 E-value=37 Score=26.76 Aligned_cols=118 Identities=12% Similarity=0.042 Sum_probs=65.4
Q ss_pred HHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccchhhchhhhhh--ccCCCCceEEEEE-eCCCHHHHHHHhhcCC--
Q psy18086 15 AAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVYVFGVQQVKR--AGGAMAGAVYVFV-KPPSIEELETRLRGRG-- 89 (166)
Q Consensus 15 ~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~IFI-~PPS~e~Le~RL~~Rg-- 89 (166)
+.|...+++|++||+|=-...........+ .++ .. ...+.. .|+-..+ .+||+ ..| .++..+|+..++
T Consensus 78 ~~I~paL~~g~~VI~DRy~~S~~ayq~~~~-l~~-~~---~~~l~~~~~~~~~PD-lti~L~dv~-pe~~~~R~~~~~dr 150 (216)
T 3tmk_A 78 DKIKKDLLEGKNIVMDRYVYSGVAYSAAKG-TNG-MD---LDWCLQPDVGLLKPD-LTLFLSTQD-VDNNAEKSGFGDER 150 (216)
T ss_dssp HHHHHHHHTTCEEEEESCHHHHHHHHHTTC-CTT-CC---HHHHHGGGTTSBCCS-EEEEEECSC-CSCGGGCCSSSCCT
T ss_pred HHHHHHHHcCCEEEEeccHhHHHHHHHhcC-CCH-HH---HHHHHHHhhCCCCCC-EEEEEeCCC-HHHHHHHhccCccc
Confidence 467777899999999977766554432211 111 00 111221 2333333 56777 543 456777765432
Q ss_pred CCCHHHHHHHHHHHHHHhhcC---CCCCCcccEEEEc--CCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 90 TETEDSLRRRLDLARRDMSYG---KDSLRSYGIISEL--AFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 90 tetee~I~~Rl~~A~~e~~~~---~~~~~~fD~vIvN--d~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
-|+ .+...|+..+-.++... ..+. .+++++ +.++ ++-.+++.+++.....
T Consensus 151 ~E~-~~f~~rvr~~Y~~la~~~~~~~~~---~~~vID~a~~s~---eeV~~~I~~~i~~~l~ 205 (216)
T 3tmk_A 151 YET-VKFQEKVKQTFMKLLDKEIRKGDE---SITIVDVTNKGI---QEVEALIWQIVEPVLS 205 (216)
T ss_dssp TCC-HHHHHHHHHHHHHHHHHHHHTTCC---SEEEEECTTCCH---HHHHHHHHHHHHHHHH
T ss_pred ccH-HHHHHHHHHHHHHHHHhccccCCC---CEEEEeCCCCCH---HHHHHHHHHHHHHHHh
Confidence 255 46778887765444221 1122 344444 3578 8888888888876553
No 116
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=68.12 E-value=15 Score=26.87 Aligned_cols=63 Identities=11% Similarity=0.044 Sum_probs=35.9
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHH------HHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDL------ARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHF 140 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~------A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~i 140 (166)
..+||+..| .+++.+|+..+ +..+... ......|.. +. ..|++|.++ .++ ++..+++.+.
T Consensus 114 ~~~v~L~~~-~e~~~~R~~~~-------~~~~~~~~~~~~~~~~~~~y~~-~~-~~~~~Id~~~~~~---~ev~~~I~~~ 180 (186)
T 2yvu_A 114 FLEIYVKAS-LEEVIRRDPKG-------LYKKALKGELENFTGITDPYEP-PE-NPQLVLDTESNTI---EHNVSYLYSL 180 (186)
T ss_dssp EEEEEEECC-HHHHHHHCHHH-------HHHHHHTTCCSSCHHHHSCCCC-CS-SCSEEEETTTSCH---HHHHHHHHHH
T ss_pred eEEEEEeCC-HHHHHHhhhhh-------hhhHHhhcchhhhhhhhhcccC-CC-CCcEEEECCCCCH---HHHHHHHHHH
Confidence 467888886 89998887431 1111000 000011221 22 457888886 467 8888888877
Q ss_pred HHh
Q psy18086 141 GLK 143 (166)
Q Consensus 141 i~~ 143 (166)
+..
T Consensus 181 l~~ 183 (186)
T 2yvu_A 181 VKA 183 (186)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 117
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=63.15 E-value=12 Score=34.79 Aligned_cols=73 Identities=15% Similarity=0.094 Sum_probs=41.0
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCC----CCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCC-CCCCHhHHHHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRG----TETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAF-FLEYNSAAGEIFEHFG 141 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rg----tetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l~~ii 141 (166)
..++||+..| .+++.+|+.++. +..+ +.. ....+..|.. +. ..|++|.+++ ++ +++.+++.+.+
T Consensus 152 p~~vV~Ldap-~Evl~~Rl~r~ly~~aR~~~--~~~---~~~~~~~Ye~-p~-~~dlvIDts~~s~---eevv~~Il~~L 220 (630)
T 1x6v_B 152 PFFEVFVDAP-LHVCEQRDVKGLYKKARAGE--IKG---FTGIDSEYEK-PE-APELVLKTDSCDV---NDCVQQVVELL 220 (630)
T ss_dssp CEEEEEEECC-HHHHHHHCTTSHHHHHTTC---------CBTTTBCCCC-CS-SCSEEEETTSSCH---HHHHHHHHHHH
T ss_pred CeEEEEEECC-HHHHHHHhccccchhhhhhh--HHH---HHHhhhhhcc-cC-CCcEEEECCCCCH---HHHHHHHHHHH
Confidence 3578999986 899999986321 0010 000 0000111221 22 5688888763 67 88889998888
Q ss_pred Hhhhhhhhcc
Q psy18086 142 LKSSEIQSHR 151 (166)
Q Consensus 142 ~~~~~~~~~~ 151 (166)
... ..-+|.
T Consensus 221 ~~~-~~ip~G 229 (630)
T 1x6v_B 221 QER-DIVPVD 229 (630)
T ss_dssp HHT-TSSCCC
T ss_pred Hhc-Cccccc
Confidence 643 334444
No 118
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=62.99 E-value=13 Score=29.24 Aligned_cols=48 Identities=13% Similarity=0.068 Sum_probs=30.2
Q ss_pred HHHHhcCCcEEEEeCHHHHHH-------HHHhhccCCccchhhchhhhhhccCCCCceEEEEEeCCCHHHHHHHhhcC
Q psy18086 18 EAVINSGKTCVLDIEVQGVQQ-------VKRAGGAMAGAVYVFGVQQVKRAGGAMAGAVYVFVKPPSIEELETRLRGR 88 (166)
Q Consensus 18 ~~v~~~Gk~~vldid~~Gv~~-------lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IFI~PPS~e~Le~RL~~R 88 (166)
+..+..|..+|+|....+..+ +++. |. .+.++|+..| .+++.+|+.+|
T Consensus 103 ~~~~~~g~~vVid~~~~~~~~~~~~~~~l~~~-g~---------------------~v~lv~l~~~-~e~~~~R~~~R 157 (253)
T 2p5t_B 103 TKLSSLGYNLLIEGTLRTVDVPKKTAQLLKNK-GY---------------------EVQLALIATK-PELSYLSTLIR 157 (253)
T ss_dssp HHHHHTTCCEEEECCTTSSHHHHHHHHHHHHT-TC---------------------EEEEEEECCC-HHHHHHHHHHH
T ss_pred HHHHhcCCCEEEeCCCCCHHHHHHHHHHHHHC-CC---------------------cEEEEEEeCC-HHHHHHHHHHH
Confidence 445677889999977654322 2222 22 3455677764 88888887765
No 119
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=62.34 E-value=21 Score=28.77 Aligned_cols=19 Identities=21% Similarity=0.597 Sum_probs=16.1
Q ss_pred eEEEEEeCCCHHHHHHHhhc
Q psy18086 68 AVYVFVKPPSIEELETRLRG 87 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~ 87 (166)
..+||+..| .+++.+|+.+
T Consensus 143 ~~vV~L~a~-~e~l~~Rl~~ 161 (250)
T 3nwj_A 143 GISIWLDVP-LEALAHRIAA 161 (250)
T ss_dssp SEEEEEECC-HHHHHHHHHC
T ss_pred CcEEEEECC-HHHHHHHHhh
Confidence 468999986 8999999975
No 120
>3ryc_E Stathmin-4; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Rattus norvegicus} SCOP: a.137.10.1 PDB: 3ryf_E* 3ryh_E* 3ryi_E* 3ut5_E* 4eb6_E* 1sa0_E* 1sa1_E* 1z2b_E* 3du7_E* 3e22_E* 3hkb_E* 3hkc_E* 3hkd_E* 3hke_E* 3n2g_E* 3n2k_E*
Probab=60.03 E-value=6 Score=30.64 Aligned_cols=45 Identities=24% Similarity=0.392 Sum_probs=28.9
Q ss_pred hhhhccCCCCceEEEEEeCCCHHH----HHHHhhcCCCCCHHHHHHHHHHHHH
Q psy18086 57 QVKRAGGAMAGAVYVFVKPPSIEE----LETRLRGRGTETEDSLRRRLDLARR 105 (166)
Q Consensus 57 ~~~~~~~~~~~~~~IFI~PPS~e~----Le~RL~~Rgtetee~I~~Rl~~A~~ 105 (166)
.-+++|| .++=|.++|||.+. +-..-. +..-|-++|++.|..|+.
T Consensus 9 l~KrasG---qafEvIL~pps~~~~~~~~~s~P~-~k~~SleEIqkKLeAAEE 57 (143)
T 3ryc_E 9 LNKATSG---QSWEVILKPPSFDGVPEFNASLPR-RRDPSLEEIQKKLEAAEE 57 (143)
T ss_dssp EEEETTE---EEEEEEEECCSSCSSCC------C-CCCCCHHHHHHHHHHHHH
T ss_pred hcccCCC---CceeeeecCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHH
Confidence 3456677 47778899998542 111122 344689999999999853
No 121
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=55.54 E-value=49 Score=29.38 Aligned_cols=23 Identities=4% Similarity=-0.057 Sum_probs=18.2
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCC
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRG 89 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rg 89 (166)
..++|++..|+.+.+++|+..|.
T Consensus 147 ~v~~l~~~~~d~e~i~~ri~~r~ 169 (520)
T 2axn_A 147 KAFFIESVCDDPTVVASNIMEVK 169 (520)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHT
T ss_pred eEEEEEEeCChHHHHHHHHHhhh
Confidence 46778888888999999996554
No 122
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=50.09 E-value=33 Score=25.77 Aligned_cols=50 Identities=22% Similarity=0.271 Sum_probs=30.3
Q ss_pred EEEEEeCCCHHHHHHHhhcC----CCCCHHHHHHHHHHHHHH----hhcCCCCCCcccEEEEc
Q psy18086 69 VYVFVKPPSIEELETRLRGR----GTETEDSLRRRLDLARRD----MSYGKDSLRSYGIISEL 123 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R----gtetee~I~~Rl~~A~~e----~~~~~~~~~~fD~vIvN 123 (166)
..|||..| .++..+|+.+| | .|.+++..++.....- +.... . ..|+||..
T Consensus 150 ~~i~vd~~-~~~~~~R~~~R~~~~g-~t~~~~~~~~~~~~~~~~~~i~~~~--~-~aD~vi~~ 207 (208)
T 3c8u_A 150 VSIRLEVP-MADLEARLVQRWLDHG-LNHDAAVARAQGNDLANARAIEAAR--L-PADLTWPQ 207 (208)
T ss_dssp EEEEECCC-HHHHHHHHHHHHHHTT-CCHHHHHHHHHTHHHHHHHHHHTTB--C-CCSEEEC-
T ss_pred EEEEEeCC-HHHHHHHHHHHHHhcC-CCHHHHHHHHHhccHHHHHHHHhCC--C-CCCEEeeC
Confidence 57999987 56655565554 5 4888888888753322 22111 1 67888753
No 123
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=49.03 E-value=12 Score=30.21 Aligned_cols=24 Identities=4% Similarity=-0.276 Sum_probs=21.4
Q ss_pred cccEEEEcCCCCCCHhHHHHHHHHHHH
Q psy18086 116 SYGIISELAFFLEYNSAAGEIFEHFGL 142 (166)
Q Consensus 116 ~fD~vIvNd~dl~~~e~a~~~l~~ii~ 142 (166)
..|++|.|++++ ++...++.+++.
T Consensus 216 ~AD~VI~N~gsl---e~l~~qV~~ll~ 239 (241)
T 1dek_A 216 DGDLVITNDGSL---EELFSKIKNTLK 239 (241)
T ss_dssp TTCEEEECCSCH---HHHHHHHHHHHH
T ss_pred CCCEEEECCCCH---HHHHHHHHHHHh
Confidence 789999999899 999999988874
No 124
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=48.90 E-value=21 Score=32.31 Aligned_cols=60 Identities=17% Similarity=0.191 Sum_probs=35.5
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHH-Hhh--------cCCCCCCcccEEEEcCC-CCCCHhHHHHHH
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLARR-DMS--------YGKDSLRSYGIISELAF-FLEYNSAAGEIF 137 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~-e~~--------~~~~~~~~fD~vIvNd~-dl~~~e~a~~~l 137 (166)
.+.||+..| .+++++|+.+ + +-. .++. ++. |. .+. ..|++|.++. ++ +++.+++
T Consensus 497 ~~~V~Lda~-~ev~~~R~~r-~------l~~---~~~~~~i~~~~~~r~~~~-~p~-~~dl~IDts~~s~---eevv~~I 560 (573)
T 1m8p_A 497 FFLVHVATP-LEHCEQSDKR-G------IYA---AARRGEIKGFTGVDDPYE-TPE-KADLVVDFSKQSV---RSIVHEI 560 (573)
T ss_dssp EEEEEECCC-HHHHHHHCSS-C------HHH---HHHTTSSSSCBTTTBCCC-CCS-SCSEEECTTTSCH---HHHHHHH
T ss_pred eEEEEEeCC-HHHHHHHhcc-c------chh---hhhHHHHHHHHhcccccc-ccC-CCCEEEECCCCCH---HHHHHHH
Confidence 578999985 8999999643 2 110 1111 111 11 022 4577887663 57 8888888
Q ss_pred HHHHHh
Q psy18086 138 EHFGLK 143 (166)
Q Consensus 138 ~~ii~~ 143 (166)
.+.+..
T Consensus 561 l~~l~~ 566 (573)
T 1m8p_A 561 ILVLES 566 (573)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888764
No 125
>4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene}
Probab=41.76 E-value=7.8 Score=32.36 Aligned_cols=46 Identities=22% Similarity=0.343 Sum_probs=28.9
Q ss_pred hhhhccCCCCceEEEEEeCCCHHHHHHHh---hcCCCCCHHHHHHHHHHHHH
Q psy18086 57 QVKRAGGAMAGAVYVFVKPPSIEELETRL---RGRGTETEDSLRRRLDLARR 105 (166)
Q Consensus 57 ~~~~~~~~~~~~~~IFI~PPS~e~Le~RL---~~Rgtetee~I~~Rl~~A~~ 105 (166)
+-+++|| .++=|.++|||.+.--..+ -.+..-|-++|+..|..|+.
T Consensus 8 l~KrasG---qafEVILkpps~~~~~~~~~s~P~kk~~SleEIqkKLeAAEE 56 (240)
T 4f61_I 8 LNKATSG---QSWEVILKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEE 56 (240)
T ss_dssp EEECSSC---EEEEEEEECCSSCSSCCCC------CCCCHHHHHHHHHHHHH
T ss_pred hccccCC---CceeeeecCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4466777 5677789999854211111 11334689999999999853
No 126
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=40.77 E-value=84 Score=23.20 Aligned_cols=64 Identities=19% Similarity=0.065 Sum_probs=35.4
Q ss_pred ceEEEEEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHH------HHhhcCCCCCCcccEEEEcCC--CCCCHhHHHHHHH
Q psy18086 67 GAVYVFVKPPSIEELETRLRGRGTETEDSLRRRLDLAR------RDMSYGKDSLRSYGIISELAF--FLEYNSAAGEIFE 138 (166)
Q Consensus 67 ~~~~IFI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~------~e~~~~~~~~~~fD~vIvNd~--dl~~~e~a~~~l~ 138 (166)
..+.||+..| .+++.+|+.+. +..+....+ .+-.|. .+. ..|++|..++ ++ +++++++.
T Consensus 123 ~~~~v~L~a~-~e~~~~R~~~~-------l~~~~r~~~~~~~~~~~~~~~-~~~-~~~~~idt~~~~~~---~e~v~~i~ 189 (200)
T 3uie_A 123 DFVEVFMDVP-LSVCEARDPKG-------LYKLARAGKIKGFTGIDDPYE-PPL-NCEISLGREGGTSP---IEMAEKVV 189 (200)
T ss_dssp SEEEEEECCC-HHHHHHHCTTS-------HHHHHHTTSSCSCBTTTBCCC-CCS-SCSEEECCSSCCCH---HHHHHHHH
T ss_pred CEEEEEEeCC-HHHHHHhcccc-------hHHHHhcCCCCCCCCCCCcCc-CCC-CCCEEEecCCCCCH---HHHHHHHH
Confidence 3567999985 99999997321 110000000 001121 122 4577887763 66 88888888
Q ss_pred HHHHh
Q psy18086 139 HFGLK 143 (166)
Q Consensus 139 ~ii~~ 143 (166)
+.+..
T Consensus 190 ~~l~~ 194 (200)
T 3uie_A 190 GYLDN 194 (200)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 127
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=40.18 E-value=64 Score=26.58 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=30.2
Q ss_pred EEEEEeCCCHHHHHHHhhcC-----C--------------CCCHHHHHHHHHHH-H----HHh-hcCC-CCCCcccEEEE
Q psy18086 69 VYVFVKPPSIEELETRLRGR-----G--------------TETEDSLRRRLDLA-R----RDM-SYGK-DSLRSYGIISE 122 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R-----g--------------tetee~I~~Rl~~A-~----~e~-~~~~-~~~~~fD~vIv 122 (166)
..|||.+| .+...+|+..| . .-|++++..++..- . ..+ ++-. ... ..|+||.
T Consensus 220 ~~I~V~a~-~~~~~~R~i~R~~~~rd~~~r~~~~~~~~~~g~s~e~a~~~v~~~~~~~~~p~~~~~i~p~~~-~ADlii~ 297 (312)
T 3aez_A 220 FSLYVDAR-IEDIEQWYVSRFLAMRTTAFADPESHFHHYAAFSDSQAVVAAREIWRTINRPNLVENILPTRP-RATLVLR 297 (312)
T ss_dssp EEEEEEEC-HHHHHHHHHHHHHHHTTTGGGSTTSTTGGGTTCCHHHHHHHHHHHHHHTHHHHHHHTTGGGGG-GCSEEEE
T ss_pred cEEEEECC-HHHHHHHHHHHHHHHHhccccCcchhhhcccCCCHHHHHHHHHHHHHhccHHHHHHhccCCCC-CCeEEEe
Confidence 56889886 46655554433 1 24778877776531 0 011 1111 112 6799998
Q ss_pred cCC
Q psy18086 123 LAF 125 (166)
Q Consensus 123 Nd~ 125 (166)
|++
T Consensus 298 ~~~ 300 (312)
T 3aez_A 298 KDA 300 (312)
T ss_dssp ECT
T ss_pred cCC
Confidence 873
No 128
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=38.59 E-value=79 Score=21.49 Aligned_cols=40 Identities=10% Similarity=0.191 Sum_probs=23.7
Q ss_pred EEEccccccCcHHHHHHHHhcCCcEEEEeC----HHHHHHHHHh
Q psy18086 3 VIIYLKSYMVNRAAVEAVINSGKTCVLDIE----VQGVQQVKRA 42 (166)
Q Consensus 3 ~~~~gn~YGTs~~~V~~v~~~Gk~~vldid----~~Gv~~lk~~ 42 (166)
+.+++..+.---...++.+++..+..-.+| +.....+++.
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~ 49 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSV 49 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHH
T ss_pred EEEEcCCCCHhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHH
Confidence 556666666666777888877766554443 3344444443
No 129
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=37.29 E-value=70 Score=24.50 Aligned_cols=71 Identities=13% Similarity=0.024 Sum_probs=41.3
Q ss_pred EEEEEeCCCHHHHHHHhhcCC---------------------------------CCCHHHHHHHHHHHHHHh----hcCC
Q psy18086 69 VYVFVKPPSIEELETRLRGRG---------------------------------TETEDSLRRRLDLARRDM----SYGK 111 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~Rg---------------------------------tetee~I~~Rl~~A~~e~----~~~~ 111 (166)
.+||+..| .+++.+|+..|. .++.+.+..++.....+. .+..
T Consensus 130 ~vi~L~~~-~~~~l~r~~~r~~~~lSgrv~al~~~~P~~lllD~~~~EP~~~ld~~~~~~i~~~l~~~~~~~~~v~~~~~ 208 (246)
T 2bbw_A 130 LVISLNIP-FETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYK 208 (246)
T ss_dssp EEEEEECC-HHHHHHHHHTEEEETTTTEEEETTTSCCSSTTBCTTTCCBCBCCGGGSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECC-HHHHHHHHHcCCCcCCCCCccccccCCCcccccccccccccccCCCCcHHHHHHHHHHHHHhHHHHHHHHh
Confidence 57788875 677777775441 236677888887654332 1222
Q ss_pred CCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhh
Q psy18086 112 DSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSE 146 (166)
Q Consensus 112 ~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~ 146 (166)
..+ -++.+|. +- .++.++++.+++.....
T Consensus 209 ~~~---~~~~id~-~~--~~~v~~~i~~~l~~~~~ 237 (246)
T 2bbw_A 209 SRG---VLHQFSG-TE--TNKIWPYVYTLFSNKIT 237 (246)
T ss_dssp HTT---CEEEEEC-SC--HHHHHHHHHHHHHTTSC
T ss_pred hcC---cEEEECC-CC--cHHHHHHHHHHHHhhCC
Confidence 111 1445555 33 16777888887766543
No 130
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=36.72 E-value=66 Score=25.85 Aligned_cols=58 Identities=5% Similarity=-0.110 Sum_probs=34.8
Q ss_pred EEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhh
Q psy18086 72 FVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQ 148 (166)
Q Consensus 72 FI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~ 148 (166)
++.|.+.+.|.+.| .-- ++++..+..-..|++...- .| ++ +...+++.+++.......
T Consensus 337 l~~~~d~~~la~~i-~l~-~~~~~~~~~~~~a~~~~~~------~f--------s~---~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 337 IEGIIDVDDLVEAF-TFF-KDEKNRKEYGKRVQDFVKT------KP--------TW---DDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp EEEECCHHHHHHHH-HHT-TSHHHHHHHHHHHHHHHTT------SC--------CH---HHHHHHHHHHHHHHTC--
T ss_pred eeCCCCHHHHHHHH-HHh-cCHHHHHHHHHHHHHHHHH------hC--------CH---HHHHHHHHHHHHHHHhhc
Confidence 46667899999998 543 4554444433344333211 22 67 888888888887765433
No 131
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=36.08 E-value=25 Score=25.51 Aligned_cols=67 Identities=9% Similarity=-0.062 Sum_probs=37.7
Q ss_pred eEEEEEeCCCHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcC-CCCCCHhHHHHHHHHHHHh
Q psy18086 68 AVYVFVKPPSIEELETRLRGRGTE---TEDSLRRRLDLARRDMSYGKDSLRSYGIISELA-FFLEYNSAAGEIFEHFGLK 143 (166)
Q Consensus 68 ~~~IFI~PPS~e~Le~RL~~Rgte---tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd-~dl~~~e~a~~~l~~ii~~ 143 (166)
+..+++.+ +.+++..|+..|+.+ +++.++. ....+.... . +-+++|.++ .++ +++++++.+++..
T Consensus 107 ~~~ls~~~-~~~v~~~R~~~r~~~~lld~~~~~~----~~~~~~~l~--~-~~~~~i~t~~~~~---~~~~~~i~~~l~~ 175 (191)
T 1zp6_A 107 LHYIVLRT-TAAEAIERCLDRGGDSLSDPLVVAD----LHSQFADLG--A-FEHHVLPVSGKDT---DQALQSAINALQS 175 (191)
T ss_dssp EEEEEEEC-CHHHHHHHHHTTCTTSCCCHHHHHH----HHHHTTCCG--G-GGGGEEECTTCCT---TTTTTTTHHHHHH
T ss_pred eEEEEecC-CHHHHHHHHHhcCCCccCCHHHHHH----HHHHHhccC--c-ccccEEECCCCCH---HHHHHHHHHHHHh
Confidence 44555555 699999999888654 2322221 112222111 0 224566544 377 8888888888865
Q ss_pred hh
Q psy18086 144 SS 145 (166)
Q Consensus 144 ~~ 145 (166)
..
T Consensus 176 ~~ 177 (191)
T 1zp6_A 176 GR 177 (191)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 132
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=33.25 E-value=17 Score=25.57 Aligned_cols=44 Identities=18% Similarity=0.359 Sum_probs=28.7
Q ss_pred cccccCcHHHHHHHHhcCCcEEEEeCHHHHHHHHHhhccCCccch
Q psy18086 7 LKSYMVNRAAVEAVINSGKTCVLDIEVQGVQQVKRAGGAMAGAVY 51 (166)
Q Consensus 7 gn~YGTs~~~V~~v~~~Gk~~vldid~~Gv~~lk~~~~~~~~~~~ 51 (166)
-..|.=. .+|-+.+..|++|+++++--.....++...|.++.+|
T Consensus 12 P~sy~Da-~~I~d~Lr~~~~VvvNL~~ld~~~AqRivDF~sG~~y 55 (87)
T 3p04_A 12 LHSFEDA-QVIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCF 55 (87)
T ss_dssp CSSGGGH-HHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHHHH
T ss_pred cCcHHHH-HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHhccceE
Confidence 3445443 3566778899999999976666666666454444444
No 133
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=29.58 E-value=59 Score=28.13 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=26.9
Q ss_pred EEEEEeCCCHHHHHHHhhcC----CC-CCHHHHHHHHHHH
Q psy18086 69 VYVFVKPPSIEELETRLRGR----GT-ETEDSLRRRLDLA 103 (166)
Q Consensus 69 ~~IFI~PPS~e~Le~RL~~R----gt-etee~I~~Rl~~A 103 (166)
++|||..| .++..+|+.+| |. .|+++...|+...
T Consensus 291 ~~i~Vdad-~ev~~~Rli~R~~~~Gl~~s~eea~~r~~~~ 329 (359)
T 2ga8_A 291 LVYKIDID-YEATEERVAKRHLQSGLVTTIAEGREKFRSN 329 (359)
T ss_dssp EEEEEECC-HHHHHHHHHHHHHHTTSCSSHHHHHHHHHHC
T ss_pred EEEEEECC-HHHHHHHHHHhhhccCCCCCHHHHHHHHHhc
Confidence 68999986 88888898887 53 3888888888753
No 134
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=26.17 E-value=1e+02 Score=24.35 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=31.9
Q ss_pred EEeCCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCCCCCCHhHHHHHHHHHHHhhhhhhh
Q psy18086 72 FVKPPSIEELETRLRGRGTETEDSLRRRLDLARRDMSYGKDSLRSYGIISELAFFLEYNSAAGEIFEHFGLKSSEIQS 149 (166)
Q Consensus 72 FI~PPS~e~Le~RL~~Rgtetee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~dl~~~e~a~~~l~~ii~~~~~~~~ 149 (166)
++.|.+.+.|.+.|..=- .+++..+..-..+++... . | ++ +...+++.+++........
T Consensus 330 ~~~~~d~~~l~~~i~~l~-~~~~~~~~~~~~~~~~~~--~-----~--------s~---~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 330 LVPVDDADGMAAALIGIL-EDDQLRAGYVARASERVH--R-----Y--------DW---SVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp ECCTTCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHGG--G-----G--------BH---HHHHHHHHHHHHHHCCTTC
T ss_pred EeCCCCHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHH--h-----C--------CH---HHHHHHHHHHHHHHHhhcc
Confidence 345567888877665421 233333333233332222 1 1 66 7888888888877654443
No 135
>3h3g_B Parathyroid hormone-related protein; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli}
Probab=26.09 E-value=13 Score=20.58 Aligned_cols=8 Identities=75% Similarity=1.277 Sum_probs=6.5
Q ss_pred chhhhhcc
Q psy18086 157 LRRRIFLK 164 (166)
Q Consensus 157 ~~~~~~~~ 164 (166)
++||+||.
T Consensus 7 ~rRr~wL~ 14 (24)
T 3h3g_B 7 LRRRFFLH 14 (26)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 68999984
No 136
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.33 E-value=1.7e+02 Score=19.38 Aligned_cols=14 Identities=14% Similarity=0.071 Sum_probs=8.8
Q ss_pred CHHHHHHHHHHHHH
Q psy18086 92 TEDSLRRRLDLARR 105 (166)
Q Consensus 92 tee~I~~Rl~~A~~ 105 (166)
+.+++..++..+..
T Consensus 112 ~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 112 IEHVLVHDVQQIIN 125 (136)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 66667666666543
No 137
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.85 E-value=2.5e+02 Score=22.40 Aligned_cols=27 Identities=4% Similarity=-0.006 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCCcccEEEEcCC
Q psy18086 92 TEDSLRRRLDLARRDMSYGKDSLRSYGIISELAF 125 (166)
Q Consensus 92 tee~I~~Rl~~A~~e~~~~~~~~~~fD~vIvNd~ 125 (166)
++++++.-++.+..++ + ..|..|.|.+
T Consensus 67 ~~~~v~~~~~~~~~~~--G-----~iDiLVNNAG 93 (254)
T 4fn4_A 67 KKKDVEEFVRRTFETY--S-----RIDVLCNNAG 93 (254)
T ss_dssp SHHHHHHHHHHHHHHH--S-----CCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHc--C-----CCCEEEECCc
Confidence 6777888777775544 3 4699999985
Done!