BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy18087
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UQ44|IQGA2_MOUSE Ras GTPase-activating-like protein IQGAP2 OS=Mus musculus GN=Iqgap2
PE=1 SV=2
Length = 1575
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDADFAVYNR 56
W+E C+ E LPP+TELE LRNG+ LAKL + P+MV E KIYD + Y +
Sbjct: 50 WMEVCLVEELPPTTELEEGLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKK 102
>sp|Q13576|IQGA2_HUMAN Ras GTPase-activating-like protein IQGAP2 OS=Homo sapiens GN=IQGAP2
PE=1 SV=4
Length = 1575
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDADFAVYNR 56
W+E C+ E LPP+TELE LRNG+ LAKL + P+MV E KIYD + Y +
Sbjct: 50 WMEVCLVEELPPTTELEEGLRNGVYLAKLAKFFAPKMVSEKKIYDVEQTRYKK 102
>sp|P46940|IQGA1_HUMAN Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens GN=IQGAP1
PE=1 SV=1
Length = 1657
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDADFAVY 54
W+E+C+ E LPP+TELE LRNG+ LAKLG++ P++V KIYD + Y
Sbjct: 53 WMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRY 103
>sp|Q9JKF1|IQGA1_MOUSE Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus GN=Iqgap1
PE=1 SV=2
Length = 1657
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDADFAVY 54
W+E+C+ E LPP+TELE LRNG+ LAKLG++ P++V KIYD + Y
Sbjct: 53 WMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDREQTRY 103
>sp|Q86VI3|IQGA3_HUMAN Ras GTPase-activating-like protein IQGAP3 OS=Homo sapiens
GN=IQGAP3 PE=1 SV=2
Length = 1631
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDAD 50
W+E+C+KE LP ELE +LRNG++LAKLGH P +VP KIYD +
Sbjct: 43 WMEACLKEELPSPVELEESLRNGVLLAKLGHCFAPSVVPLKKIYDVE 89
>sp|Q12280|IQG1_YEAST Ras GTPase-activating-like protein IQG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IQG1 PE=1 SV=1
Length = 1495
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MSIWIESCIKETLPPSTEL--ESNLRNGIVLAKLGHYLDPEM 40
+ IWIE+ I+E LP EL +LRNG+ LAKL ++P++
Sbjct: 114 VKIWIEAVIEEALPSEIELCVGDSLRNGVFLAKLTQRINPDL 155
>sp|Q55GV9|LIMCH_DICDI Calponin homology and LIM domain-containing protein
OS=Dictyostelium discoideum GN=ChLim PE=1 SV=1
Length = 686
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPE-SKIYDADFA------VYNR 56
WIE I + P ++ +S+LR+GI L KL + + P VP+ ++ DFA ++ +
Sbjct: 24 WIERVINQKFP--SDFQSSLRDGIFLCKLINQIQPNSVPKYNQSPSTDFAKRENIQLFIK 81
Query: 57 VAEKTEMLSHTQLTDGED 74
A+ + L TQL + +D
Sbjct: 82 SAKHSMGLRDTQLFESQD 99
>sp|O14188|RNG2_SCHPO Ras GTPase-activating-like protein rng2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rng2 PE=1 SV=1
Length = 1489
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPE 39
WIE C+ L P++ E +LRNG+VLA L P+
Sbjct: 50 WIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPD 85
>sp|P14318|MP20_DROME Muscle-specific protein 20 OS=Drosophila melanogaster GN=Mp20
PE=2 SV=2
Length = 184
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 4 WIESCIKETLPPSTELESNLRNGIVLAKLGHYLDPEMVPESKIYDADF 51
WIE+ I E P E L++G VL KL + L P VP+ F
Sbjct: 26 WIEAIIAEKFPAGQSYEDVLKDGQVLCKLINVLSPNAVPKVNSSGGQF 73
>sp|Q6LR94|MATP_PHOPR Macrodomain Ter protein OS=Photobacterium profundum GN=matP PE=3
SV=1
Length = 148
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 19 LESNLRNGIVLAKLGHYLDPEMVPESKIYDADFAVYNRVAEKTEMLSHT 67
LE+ L+ I + H+ ++ K D D+ V+ ++AEK++ L T
Sbjct: 66 LENKLKQAIRAKRKRHFNAEQVHTRKKSIDLDYRVWEKLAEKSQELGST 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,176,183
Number of Sequences: 539616
Number of extensions: 885487
Number of successful extensions: 1708
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1699
Number of HSP's gapped (non-prelim): 10
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)