Query psy18090
Match_columns 421
No_of_seqs 269 out of 879
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 22:20:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18090.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/18090hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2557|consensus 100.0 1.6E-83 3.4E-88 620.2 26.5 399 1-419 1-427 (427)
2 smart00584 TLDc domain in TBC 100.0 8.9E-40 1.9E-44 296.3 18.3 161 207-375 1-165 (165)
3 KOG2372|consensus 100.0 6.6E-39 1.4E-43 294.2 15.3 173 195-375 64-241 (241)
4 KOG4636|consensus 100.0 4.6E-33 9.9E-38 269.9 18.5 185 208-410 264-479 (483)
5 PF07534 TLD: TLD; InterPro: 100.0 4.3E-32 9.2E-37 237.5 12.6 136 232-375 1-139 (139)
6 COG5142 OXR1 Oxidation resista 100.0 2.5E-29 5.3E-34 221.3 9.8 160 208-375 35-212 (212)
7 KOG2801|consensus 99.9 7.8E-24 1.7E-28 201.5 -1.0 171 204-379 339-557 (559)
8 KOG0044|consensus 99.8 5E-19 1.1E-23 163.0 12.1 149 21-183 22-187 (193)
9 KOG0034|consensus 99.1 2.3E-10 5E-15 105.5 10.1 122 37-180 47-184 (187)
10 COG5126 FRQ1 Ca2+-binding prot 98.9 8.3E-09 1.8E-13 92.5 10.7 130 19-174 11-159 (160)
11 PTZ00183 centrin; Provisional 98.0 7.5E-05 1.6E-09 65.9 10.6 129 24-174 12-157 (158)
12 PTZ00184 calmodulin; Provision 97.7 0.00055 1.2E-08 59.4 11.4 124 24-169 6-146 (149)
13 KOG0038|consensus 95.8 0.031 6.7E-07 49.3 6.8 94 65-177 78-183 (189)
14 KOG2562|consensus 95.6 0.052 1.1E-06 56.1 8.6 125 35-179 289-431 (493)
15 KOG0044|consensus 95.1 0.26 5.6E-06 45.9 10.8 111 24-171 10-128 (193)
16 KOG0027|consensus 94.9 0.37 8.1E-06 42.6 11.1 110 35-169 19-147 (151)
17 cd00213 S-100 S-100: S-100 dom 94.6 0.041 9E-07 44.0 3.8 51 36-86 22-80 (88)
18 PF13499 EF-hand_7: EF-hand do 94.6 0.047 1E-06 41.0 3.9 49 35-83 11-66 (66)
19 PF13833 EF-hand_8: EF-hand do 94.4 0.035 7.6E-07 40.1 2.7 45 39-84 3-52 (54)
20 cd05030 calgranulins Calgranul 94.3 0.045 9.7E-07 44.3 3.3 51 38-88 24-82 (88)
21 PTZ00184 calmodulin; Provision 94.3 0.24 5.2E-06 42.6 8.1 80 36-115 59-146 (149)
22 smart00027 EH Eps15 homology d 94.2 0.067 1.4E-06 43.7 4.2 58 24-84 5-71 (96)
23 KOG0034|consensus 93.5 0.47 1E-05 44.0 9.0 81 37-117 79-175 (187)
24 cd05022 S-100A13 S-100A13: S-1 93.3 0.099 2.1E-06 42.5 3.6 50 36-85 21-75 (89)
25 cd05024 S-100A10 S-100A10: A s 93.2 0.16 3.6E-06 41.5 4.8 55 32-86 15-77 (91)
26 cd00052 EH Eps15 homology doma 92.9 0.16 3.4E-06 37.8 4.1 49 35-86 10-62 (67)
27 PTZ00183 centrin; Provisional 92.8 0.44 9.5E-06 41.6 7.4 71 36-106 65-139 (158)
28 PLN02964 phosphatidylserine de 92.8 0.31 6.6E-06 53.3 7.6 93 20-114 135-243 (644)
29 cd05029 S-100A6 S-100A6: S-100 92.3 0.19 4.1E-06 40.7 4.1 49 38-86 26-80 (88)
30 PF13499 EF-hand_7: EF-hand do 91.8 0.28 6.1E-06 36.6 4.3 59 94-169 1-66 (66)
31 cd05023 S-100A11 S-100A11: S-1 91.3 0.29 6.3E-06 39.7 4.0 51 36-86 22-81 (89)
32 KOG4347|consensus 90.7 0.32 7E-06 52.3 4.8 64 43-106 537-604 (671)
33 KOG0036|consensus 90.6 3.3 7.1E-05 42.7 11.6 129 32-186 21-159 (463)
34 cd05025 S-100A1 S-100A1: S-100 90.0 0.37 8E-06 39.0 3.6 51 35-85 21-80 (92)
35 cd05031 S-100A10_like S-100A10 90.0 0.39 8.5E-06 39.0 3.8 49 36-84 21-78 (94)
36 COG5126 FRQ1 Ca2+-binding prot 88.8 1.6 3.6E-05 39.4 7.1 81 37-117 68-156 (160)
37 cd05027 S-100B S-100B: S-100B 88.8 0.6 1.3E-05 37.7 4.0 49 36-84 21-78 (88)
38 cd05026 S-100Z S-100Z: S-100Z 88.7 0.61 1.3E-05 38.0 4.0 51 36-86 23-82 (93)
39 PF13833 EF-hand_8: EF-hand do 88.6 1.5 3.2E-05 31.4 5.6 46 70-115 1-51 (54)
40 PF09069 EF-hand_3: EF-hand; 88.3 2.3 5E-05 34.7 7.0 80 92-185 2-88 (90)
41 PF12763 EF-hand_4: Cytoskelet 87.7 0.64 1.4E-05 39.0 3.6 59 24-85 5-71 (104)
42 KOG4223|consensus 87.5 1.4 2.9E-05 44.0 6.2 110 35-166 174-300 (325)
43 cd00051 EFh EF-hand, calcium b 87.2 0.92 2E-05 31.9 3.8 47 36-83 12-62 (63)
44 KOG0027|consensus 86.5 3.8 8.3E-05 36.1 8.2 93 24-116 42-148 (151)
45 KOG4286|consensus 86.3 4 8.6E-05 44.9 9.3 119 60-186 472-594 (966)
46 KOG0377|consensus 86.0 0.69 1.5E-05 47.8 3.4 57 35-91 558-621 (631)
47 KOG4666|consensus 85.5 1.5 3.3E-05 43.7 5.4 97 63-177 264-365 (412)
48 KOG4223|consensus 85.0 5.2 0.00011 39.9 8.8 55 32-86 84-142 (325)
49 KOG2643|consensus 82.7 1.1 2.3E-05 46.4 3.1 95 70-171 212-314 (489)
50 KOG0028|consensus 82.7 35 0.00076 30.9 12.2 70 35-106 44-119 (172)
51 KOG2643|consensus 80.8 25 0.00053 36.8 11.9 117 35-171 244-384 (489)
52 PF00036 EF-hand_1: EF hand; 79.3 2 4.4E-05 27.2 2.5 22 64-85 6-28 (29)
53 KOG0031|consensus 77.2 55 0.0012 29.6 11.6 69 37-106 45-114 (171)
54 cd00051 EFh EF-hand, calcium b 76.1 9.7 0.00021 26.4 5.7 48 66-113 8-60 (63)
55 KOG0037|consensus 74.2 54 0.0012 31.2 11.3 125 27-176 55-193 (221)
56 cd00252 SPARC_EC SPARC_EC; ext 71.4 5.5 0.00012 34.0 3.8 54 25-83 44-106 (116)
57 cd00252 SPARC_EC SPARC_EC; ext 70.0 12 0.00027 31.9 5.7 53 91-171 46-108 (116)
58 COG4359 Uncharacterized conser 67.7 13 0.00027 34.6 5.5 104 35-153 8-112 (220)
59 KOG0030|consensus 67.5 82 0.0018 28.0 10.2 123 22-171 5-151 (152)
60 smart00027 EH Eps15 homology d 67.3 19 0.00041 29.0 6.2 51 64-116 16-71 (96)
61 KOG0751|consensus 65.0 18 0.0004 38.2 6.7 85 19-106 27-121 (694)
62 cd00052 EH Eps15 homology doma 64.4 29 0.00064 25.2 6.3 49 66-116 7-60 (67)
63 KOG0037|consensus 63.6 1.2E+02 0.0025 28.9 11.2 75 35-116 105-187 (221)
64 PF14513 DAG_kinase_N: Diacylg 59.5 12 0.00027 32.9 3.8 31 39-69 47-77 (138)
65 PF14788 EF-hand_10: EF hand; 48.3 26 0.00056 25.5 3.3 44 42-86 3-50 (51)
66 cd05027 S-100B S-100B: S-100B 44.5 96 0.0021 24.8 6.6 55 63-117 13-79 (88)
67 PF09279 EF-hand_like: Phospho 43.9 39 0.00084 26.3 4.1 52 32-83 7-67 (83)
68 cd05023 S-100A11 S-100A11: S-1 42.0 1.1E+02 0.0024 24.5 6.6 24 148-171 54-80 (89)
69 PRK12309 transaldolase/EF-hand 39.4 39 0.00084 35.0 4.3 24 70-106 347-370 (391)
70 cd00213 S-100 S-100: S-100 dom 39.2 1E+02 0.0022 24.1 5.9 49 70-118 23-80 (88)
71 KOG4251|consensus 38.3 1.4E+02 0.0031 29.0 7.5 76 39-117 116-202 (362)
72 KOG0046|consensus 38.1 55 0.0012 35.0 5.1 66 17-83 8-83 (627)
73 PF14658 EF-hand_9: EF-hand do 38.0 1.3E+02 0.0028 23.1 5.9 44 63-106 3-48 (66)
74 PF13405 EF-hand_6: EF-hand do 37.5 39 0.00085 21.1 2.6 20 65-84 7-27 (31)
75 cd05025 S-100A1 S-100A1: S-100 35.7 1.5E+02 0.0033 23.5 6.5 55 63-117 14-80 (92)
76 KOG0468|consensus 35.6 64 0.0014 35.8 5.3 87 16-104 285-400 (971)
77 cd05026 S-100Z S-100Z: S-100Z 34.7 1.7E+02 0.0036 23.5 6.6 58 63-120 15-84 (93)
78 cd05031 S-100A10_like S-100A10 32.3 1.7E+02 0.0037 23.3 6.3 57 64-120 14-82 (94)
79 cd05022 S-100A13 S-100A13: S-1 30.3 1.8E+02 0.0039 23.4 6.0 57 63-120 13-78 (89)
80 cd05030 calgranulins Calgranul 29.3 1.9E+02 0.0041 22.9 6.0 52 70-121 23-83 (88)
81 PLN02964 phosphatidylserine de 28.5 65 0.0014 35.6 4.0 51 35-86 190-244 (644)
82 PF13202 EF-hand_5: EF hand; P 28.1 55 0.0012 19.8 2.0 15 154-168 10-24 (25)
83 KOG0798|consensus 27.9 1.2E+02 0.0026 31.0 5.5 80 37-117 272-355 (380)
84 KOG1761|consensus 26.5 40 0.00087 28.7 1.6 31 22-53 50-84 (116)
85 cd07316 terB_like_DjlA N-termi 25.2 2.6E+02 0.0056 22.4 6.3 43 62-104 40-83 (106)
86 PF07765 KIP1: KIP1-like prote 22.5 1.7E+02 0.0037 23.0 4.2 33 90-122 22-69 (74)
87 cd05024 S-100A10 S-100A10: A s 22.0 4.4E+02 0.0095 21.5 7.0 46 107-171 28-76 (91)
88 PF08726 EFhand_Ca_insen: Ca2+ 21.2 1.4E+02 0.003 23.1 3.6 47 32-82 13-66 (69)
89 smart00054 EFh EF-hand, calciu 20.7 1.2E+02 0.0026 16.8 2.6 18 154-171 11-28 (29)
No 1
>KOG2557|consensus
Probab=100.00 E-value=1.6e-83 Score=620.19 Aligned_cols=399 Identities=29% Similarity=0.480 Sum_probs=353.3
Q ss_pred CCCccccccCCCccccccccccCCccchHHH----hhhcCCC-CcccHHHHHHHHHhhccchhHHHHHhhhcCC-----C
Q psy18090 1 MGNEHSNKKQGSGSLKKNLSRKIKPEDVKKI----KSLTNGK-DVLTKVDVFELWSMEIKDSLINFYLKYYFPD-----K 70 (421)
Q Consensus 1 mgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~-----~ 70 (421)
|||+.|+++.+ |++..|+++.+ +..++|+ .+.|.+.+...|....+.+|.+++..++|+. +
T Consensus 1 mgn~n~kr~~~---------~~~naE~~~~l~~~kk~~~~ga~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~~~q 71 (427)
T KOG2557|consen 1 MGNSNSKRVDH---------RFINAETQKKLDDLKKLFVSGASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQRRQ 71 (427)
T ss_pred CCCcccccccc---------cccCHHHHHHHHHHhhccccccchhhhhhhhhhcccccchhhhhhhccceEeeeccCccC
Confidence 99999998855 24477777777 2235666 7899999999999989999999999999999 6
Q ss_pred CCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc-------hHHHHHHHHHHhhhhh-hcccchhhhhhcccCCCCcc
Q psy18090 71 TEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG-------DLINYVQALLNSCLFI-YQSRDDKELWSSLNIDSDKG 142 (421)
Q Consensus 71 ~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~-------el~~~ve~lv~sv~~~-l~~~~~~~~w~~~~~~~~~~ 142 (421)
+.++++++++++.+++.+||-++++++++.+.++++ ++.+|+..++.++++. ..+++...+|..+-...+
T Consensus 72 ~~~~~l~k~~~~~~~~~~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~-- 149 (427)
T KOG2557|consen 72 DDKMTLEKLVIAKATYEKGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLN-- 149 (427)
T ss_pred CccchHHHHhhHHhhhccCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhheeeecccchhhhhhhhhhccccc--
Confidence 789999999999999999999999999999999987 5666666666665554 666666677554432222
Q ss_pred cHHHHHHHHhccCCCCccCHHHHHHHHhhchhHHHHHHHHHHhhhccCCCCc--c---cCCCCCCCCCcccCCCHHHHHH
Q psy18090 143 SLIVYANYLCMGDCNNEITFDSLQKWLSTTHEIAYLHKYVLSHMFGFNTSQR--I---IPTPVYNPSFTMSILDYSHIMF 217 (421)
Q Consensus 143 ~v~~la~~l~~k~~d~~is~~ef~~Wl~~~P~i~~~L~~~~~~~~~~~~~~~--~---~p~~~~~~~~~s~iL~~~~~~~ 217 (421)
...+.|.+++......|++|+..||.+..+.+.++.++|.+.+..+ + +|..+..++.. -++..++++.
T Consensus 150 ------~~~~~ke~e~t~p~~~le~~~s~~p~f~~i~r~~fs~L~~~~g~sk~pil~~l~~~~~~sh~~-~~i~~~~~l~ 222 (427)
T KOG2557|consen 150 ------AATFSKEDEGTEPGMSLEDFRSWCPFFPTIRKFLFSLLMPPSGVSKGPILPHLLYEDSVSHDR-LLIKKEYALH 222 (427)
T ss_pred ------hhhhccccccCCCchhHHHHhhhchHHHHHHHHHHHHhccccCCccCcccccccccccccccc-ceeecchhhe
Confidence 4456688899999999999999999999999999998887655554 3 33455677776 7889999999
Q ss_pred HHHhcCccccCceeEEEeeccccchHHHHHHHhccCCCEEEEEEcCCccEEEeeccCCcccCCCcccCCceEEEEecCCC
Q psy18090 218 LNLNLMPEFQKQWRLLFSSQFQGESFTRLMACAINQGPLLVLVKDDKANIFGAYASTNLTLCPKFYGDQNSFLFTLKPDM 297 (421)
Q Consensus 218 L~~~LP~~~~~~w~LLYss~~hG~S~~~f~~~~~~~gPtlllIk~~~g~VFG~y~s~~w~~~~~~~Gd~~~FLFsl~P~~ 297 (421)
|+.+||...+.+|++||+++.||.||++|..++.++|||++||+|++|+|||+|+|++|...++|+||.+||||+|.|++
T Consensus 223 in~~lp~~~r~~wr~lysss~~gqsfSt~l~~~~~~gp~v~vI~d~d~~vFGgyASq~we~~pQF~Gd~~~fLfqL~Pkm 302 (427)
T KOG2557|consen 223 INGALPHHERVEWKLLYSSSVHGQSFSTFLGHTSGMGPSVLIIKDTEGYVFGGYASQPWERYPQFYGDMKSFLFQLNPKM 302 (427)
T ss_pred ecccCCcchhhceeeeeeecccccchhhhhhhccCCCCeEEEEEcCCCceecccccCcccccCccCCccceeeeeecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCceEEecCCCCCCCCceeecCCCCceeEEEeCCCCCceecccccccCCCCCCCCCCCeeEEEEEEEEecCC
Q psy18090 298 KVFNSSGFNENFIYLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTCSTFKDYQMLSHDKHFKIMHIELWGVGIP 377 (421)
Q Consensus 298 ~vy~~tg~n~~~~y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~Tf~~~~~Ls~~~~F~I~~iEVWg~g~~ 377 (421)
++|++||+|+||+|+|.+||||||||||||++++|+||||.+|+.|+|.+.|+||+ +|+|+..++|+|+.||||++| |
T Consensus 303 a~y~aTgyn~~yqylN~~QQtiPNGLGmGGq~n~fgL~Id~sFg~Gqs~e~cTty~-spqLSk~~~fqi~~iEvWavg-D 380 (427)
T KOG2557|consen 303 AIYRATGYNTNYQYLNFTQQTIPNGLGMGGQINHFGLFIDASFGQGQSFECCTTYE-SPQLSKTSRFQIEVIEVWAVG-D 380 (427)
T ss_pred eeecccCCccceEEeccccccCCCccccCcccceeeEEEEeecCCCccccccccCC-CccccccccccceEEEEEecC-C
Confidence 99999999999999999999999999999999999999999999999999999998 999999999999999999999 9
Q ss_pred CCchhhh-----cCCCCCCCChHHHHHHhhcCCCcCCCCCCCCCCcc
Q psy18090 378 PPTAEEK-----GERSVLDADPTASALLELAGKTKHSAGLREPDVEL 419 (421)
Q Consensus 378 ~~~~~~~-----~~~~~ld~~~e~ralLem~G~~~~s~g~re~~~~~ 419 (421)
.|.+|+. .||+|||.|||||||||+||+.+||||||||+.||
T Consensus 381 ~p~eEq~ekgn~~kkSvLD~dpEdrAmLElaGksmhSeglRep~~De 427 (427)
T KOG2557|consen 381 APNEEQDEKGNAMKKSVLDRDPEDRAMLELAGKSMHSEGLREPALDE 427 (427)
T ss_pred CcchhhhhccCccccccccCCHHHHHHHHHhccccccccccCCCCCC
Confidence 8776542 58999999999999999999999999999999774
No 2
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=100.00 E-value=8.9e-40 Score=296.33 Aligned_cols=161 Identities=36% Similarity=0.670 Sum_probs=150.5
Q ss_pred ccCCCHHHHHHHHHhcCcccc-CceeEEEeeccccchHHHHHHHhcc-CCCEEEEEEcCCccEEEeeccCCcccCCCccc
Q psy18090 207 MSILDYSHIMFLNLNLMPEFQ-KQWRLLFSSQFQGESFTRLMACAIN-QGPLLVLVKDDKANIFGAYASTNLTLCPKFYG 284 (421)
Q Consensus 207 s~iL~~~~~~~L~~~LP~~~~-~~w~LLYss~~hG~S~~~f~~~~~~-~gPtlllIk~~~g~VFG~y~s~~w~~~~~~~G 284 (421)
+.||+++++..|+.+||...+ .+|+|||++++||+|+++|+++|.+ ++|||+||+++++.|||||++++|+.++.|||
T Consensus 1 ~~iL~~~~~~~l~~~lP~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~~ifGaf~~~~w~~~~~~~G 80 (165)
T smart00584 1 SSILSEEILALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDGEVFGAYASQAWRVSDHFYG 80 (165)
T ss_pred CccCCHHHHHHHHHhCCHhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCCCEEEEEcCCCCccCCcEEC
Confidence 379999999999999999875 5699999999999999999999997 67899999999999999999999999999999
Q ss_pred CCceEEEEecCCCcccccCCCCC-ceEEecCCCCCCCCceeecCCCCceeEEEeCCCCCceecccccccCCCCCCC-CCC
Q psy18090 285 DQNSFLFTLKPDMKVFNSSGFNE-NFIYLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTCSTFKDYQMLS-HDK 362 (421)
Q Consensus 285 d~~~FLFsl~P~~~vy~~tg~n~-~~~y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~Tf~~~~~Ls-~~~ 362 (421)
+.+||||++.|.+++|+|++.|+ .|++++ ++++.|||+.++++||||+++.+|++. +|.||+ +++|+ ..+
T Consensus 81 ~~~sFLF~l~p~~~~y~~~~~n~~~~~~~~------~~~~~~Ggg~g~~~l~id~~l~~g~s~-~~~tf~-~~~L~~~~~ 152 (165)
T smart00584 81 TGESFLFQLNPKFVVYDWTGKNKYYYINGT------PDSLPIGGGGGGFGLWIDEDLNHGSSS-HCKTFG-NPPLSTKQE 152 (165)
T ss_pred CCCeEEEEEcCCceEEcccccCcEEEEecC------CCeEeecCCCCceeEEEehhhCCeEeC-CCCCcC-CccccCCCC
Confidence 99999999999999999999987 777765 479999999888999999999999998 899999 99998 589
Q ss_pred CeeEEEEEEEEec
Q psy18090 363 HFKIMHIELWGVG 375 (421)
Q Consensus 363 ~F~I~~iEVWg~g 375 (421)
+|.|.+||||++|
T Consensus 153 ~f~I~~iEVw~~g 165 (165)
T smart00584 153 DFLILDIEVWGFG 165 (165)
T ss_pred CEEEEEEEEEecC
Confidence 9999999999986
No 3
>KOG2372|consensus
Probab=100.00 E-value=6.6e-39 Score=294.21 Aligned_cols=173 Identities=31% Similarity=0.614 Sum_probs=160.8
Q ss_pred ccCCCCCCCCCcccCCCHHHHHHHHHhcCcccc--CceeEEEeeccccchHHHHHHHhcc-CCCEEEEEEcCCccEEEee
Q psy18090 195 IIPTPVYNPSFTMSILDYSHIMFLNLNLMPEFQ--KQWRLLFSSQFQGESFTRLMACAIN-QGPLLVLVKDDKANIFGAY 271 (421)
Q Consensus 195 ~~p~~~~~~~~~s~iL~~~~~~~L~~~LP~~~~--~~w~LLYss~~hG~S~~~f~~~~~~-~gPtlllIk~~~g~VFG~y 271 (421)
+.+++++...+.|.||++.++.+|..+||++.+ ..|+|+|++.+||+|+++||+++.. ..|+|+||+|++|.|||||
T Consensus 64 ~~~dl~~~~~~~~~ll~~~~~~~l~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~vFGa~ 143 (241)
T KOG2372|consen 64 LEGDLEPDLRYKSQLLTPEMIRQLREHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGDVFGAF 143 (241)
T ss_pred ccccCCcccccccccCCHHHHHHHHhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCCEeeEe
Confidence 444444444455689999999999999999976 5899999999999999999999986 7899999999999999999
Q ss_pred ccCCcccCCCcccCCceEEEEecC--CCcccccCCCCCceEEecCCCCCCCCceeecCCCCceeEEEeCCCCCceecccc
Q psy18090 272 ASTNLTLCPKFYGDQNSFLFTLKP--DMKVFNSSGFNENFIYLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTC 349 (421)
Q Consensus 272 ~s~~w~~~~~~~Gd~~~FLFsl~P--~~~vy~~tg~n~~~~y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c 349 (421)
++.+.+...+|||+++||||+..| ++++|+|||.|..|+||.. ..|.|||+.|.||||||.++.+|.|+ +|
T Consensus 144 ~~~~i~p~dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~~------dfLa~G~GgGRfgLwLD~dL~~G~S~-~c 216 (241)
T KOG2372|consen 144 VSDAIRPNDHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCDK------DFLAFGGGGGRFGLWLDGDLLHGSSH-PC 216 (241)
T ss_pred eccceeccCCcCCCCCeEEEEecCCCceeEeeecCCcceEEEech------hHhhhcCCCCceEEEecccccccccC-CC
Confidence 999999999999999999999999 8999999999999999985 68999999999999999999999998 99
Q ss_pred cccCCCCCCCCCCCeeEEEEEEEEec
Q psy18090 350 STFKDYQMLSHDKHFKIMHIELWGVG 375 (421)
Q Consensus 350 ~Tf~~~~~Ls~~~~F~I~~iEVWg~g 375 (421)
.||+ |.+|+.+++|.|++||+|++.
T Consensus 217 eTFg-N~~Ls~~qdF~Iq~lElW~f~ 241 (241)
T KOG2372|consen 217 ETFG-NEPLSDKQDFIIQDLELWGFE 241 (241)
T ss_pred cccC-CcccCCcCceEEEEEEEEeeC
Confidence 9999 999999999999999999984
No 4
>KOG4636|consensus
Probab=100.00 E-value=4.6e-33 Score=269.89 Aligned_cols=185 Identities=24% Similarity=0.414 Sum_probs=156.4
Q ss_pred cCCCHHHHHHHHHhcCcccc-------------CceeEEEeeccccchHHHHHHHhcc-CCCEEEEEEcCCccEEEeecc
Q psy18090 208 SILDYSHIMFLNLNLMPEFQ-------------KQWRLLFSSQFQGESFTRLMACAIN-QGPLLVLVKDDKANIFGAYAS 273 (421)
Q Consensus 208 ~iL~~~~~~~L~~~LP~~~~-------------~~w~LLYss~~hG~S~~~f~~~~~~-~gPtlllIk~~~g~VFG~y~s 273 (421)
.|++..++|.|...||+-+. .+|+|||.|..||.+.|+|++++.+ +||||+|+++++++++...++
T Consensus 264 ~L~plgqaW~l~~slp~~ys~eil~~pp~tsGeshwtlLY~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkder~~viA~~ 343 (483)
T KOG4636|consen 264 ILSPLGQAWYLQSSLPAVYSPEILAKPPETSGESHWTLLYTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDERVVVIAAD 343 (483)
T ss_pred hhhhHHHHHHHhccCCcccCchhccCCCCCCCCCceeecchhhhhccchhhHHHHhccccCCeEEEEEecCCcEEEEeec
Confidence 36677799999999998641 7999999999999999999999996 999999999999999999999
Q ss_pred CCcccCCCcccCCceEEEEecCCCcccccCCCCCceEEecCCCCCCCCceeecCCCCceeEEEeCCCCCceecccccccC
Q psy18090 274 TNLTLCPKFYGDQNSFLFTLKPDMKVFNSSGFNENFIYLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTCSTFK 353 (421)
Q Consensus 274 ~~w~~~~~~~Gd~~~FLFsl~P~~~vy~~tg~n~~~~y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~Tf~ 353 (421)
+.|+.+..+||...+.+|+|.|.++++..+ .|++|||.+.+..|.||+||+..++..|.||+||.+-..-
T Consensus 344 qew~e~~~~fgG~~~~~f~i~P~f~~~~~s---~N~~Y~nl~~rg~p~Gl~fg~tlgne~i~idedF~kItvl------- 413 (483)
T KOG4636|consen 344 QEWRESGNRFGGTFTSFFEIVPNFRRIDGS---ANSIYCNLKLRGSPYGLSFGNTLGNEEIKIDEDFDKITVL------- 413 (483)
T ss_pred hhhhhhccccccccceeEEeecceEEecCC---CceEEEeccccCCccceecCCCCCCceeeeccchhhcccc-------
Confidence 999999877776666679999999998854 6799999999999999999999999999999999976542
Q ss_pred CCCCCCCCCCeeEEEEEEEEecCCCCchhh-------------hcCCCCCC----CChHHHHHHhhcCCCcCCC
Q psy18090 354 DYQMLSHDKHFKIMHIELWGVGIPPPTAEE-------------KGERSVLD----ADPTASALLELAGKTKHSA 410 (421)
Q Consensus 354 ~~~~Ls~~~~F~I~~iEVWg~g~~~~~~~~-------------~~~~~~ld----~~~e~ralLem~G~~~~s~ 410 (421)
.-.-.|.+|||||||+ ...++. ++|+..|. .|++||.||||+|++++.+
T Consensus 414 -------pveA~ildIEvWGcgg-~~~re~Qqk~kkwq~~~te~~r~v~L~~~tW~D~Pdk~llem~G~qn~~~ 479 (483)
T KOG4636|consen 414 -------PVEAEILDIEVWGCGG-AGTREDQQKLKKWQKQQTEKHRRVPLPGNTWDDNPDKTLLEMAGFQNSTE 479 (483)
T ss_pred -------chhcceeeEEEeccCC-cccHHHHHHHHHHHHHHHhhcccccCCCCccccChHHHHHHHhCCCCCch
Confidence 1223589999999995 433331 14555573 5788999999999998764
No 5
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.98 E-value=4.3e-32 Score=237.50 Aligned_cols=136 Identities=41% Similarity=0.776 Sum_probs=99.6
Q ss_pred EEEeeccccchHHHHHHHhccCCCEEEEEEcCCccEEEeeccCCcccCCC-cccCCceEEEEecCCCcccccCCCCCceE
Q psy18090 232 LLFSSQFQGESFTRLMACAINQGPLLVLVKDDKANIFGAYASTNLTLCPK-FYGDQNSFLFTLKPDMKVFNSSGFNENFI 310 (421)
Q Consensus 232 LLYss~~hG~S~~~f~~~~~~~gPtlllIk~~~g~VFG~y~s~~w~~~~~-~~Gd~~~FLFsl~P~~~vy~~tg~n~~~~ 310 (421)
|||+++.||+|+++|+++|.+++|||+||++.+|+|||+|++++|+.+.. |+|+.+||||+|.|.+++|++++.|..|+
T Consensus 1 Lly~s~~dG~s~~~f~~~~~~~~~~l~iv~t~~g~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~~~~~~~~~~~~~ 80 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCDGKGPTLLIVKTSDGQIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFKIFKWTGKNQNYI 80 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHTT-S-EEEEEEETTS-EEEEEESS-----SS--B--TT-EEEE-SSS-EEEE--SS----E
T ss_pred CcCccchhCcCHHHHHHhcCCCCCEEEEEECCCCcEEEEEeCCcccccCccccCCCCeEEEEeccccceeecccccceee
Confidence 79999999999999999999999999999999999999999999988765 99999999999999999999999998888
Q ss_pred EecCCCCCCCCceeecCCCCceeEEEeCCCCCceecccccccCCCCCCC--CCCCeeEEEEEEEEec
Q psy18090 311 YLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTCSTFKDYQMLS--HDKHFKIMHIELWGVG 375 (421)
Q Consensus 311 y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~Tf~~~~~Ls--~~~~F~I~~iEVWg~g 375 (421)
+++. .||+||++.++++||||.++.++.++ .|.||+ +++|. ....|.|.+||||+||
T Consensus 81 ~~~~------~~~~fG~~~~~~~l~i~~~~~~~~~~-~~~ty~-~~~l~~~~~~~f~i~~iEV~~~g 139 (139)
T PF07534_consen 81 NCNN------QGLGFGGGSNGFDLWIDSDFNSGSSS-HSETYG-NPPLSNDGQESFDIDEIEVWGLG 139 (139)
T ss_dssp EEET------TEEEES-SSSS-SEEEETTS-EEEE---BTTTT-B--SS--SSSEEEEEEEEEEE--
T ss_pred eccC------CcceEeecCCceEEEEeCCCCcEEEe-CCCccC-CCcccCCCCCCcEEEEEEEEEEC
Confidence 8875 58999998778999999999999998 889999 99998 7889999999999997
No 6
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.96 E-value=2.5e-29 Score=221.33 Aligned_cols=160 Identities=29% Similarity=0.505 Sum_probs=148.4
Q ss_pred cCCCHHHHHHHHHhcCcccc--CceeEEEeeccccchHHHHHHHhcc-CCC-----EEEEEEcCCccEEEeeccCCcccC
Q psy18090 208 SILDYSHIMFLNLNLMPEFQ--KQWRLLFSSQFQGESFTRLMACAIN-QGP-----LLVLVKDDKANIFGAYASTNLTLC 279 (421)
Q Consensus 208 ~iL~~~~~~~L~~~LP~~~~--~~w~LLYss~~hG~S~~~f~~~~~~-~gP-----tlllIk~~~g~VFG~y~s~~w~~~ 279 (421)
+||+++.+..|...||.+++ ..|+||||..+||+|+++|+..|.. +.| +||+|+|++|.|||||.++..+..
T Consensus 35 ~llt~e~~~~ire~lp~Ry~~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~dgd~FGaf~~d~~~pa 114 (212)
T COG5142 35 SLLTEEIVTRIRESLPDRYKYSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDKDGDLFGAFFEDRIRPA 114 (212)
T ss_pred ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcCCCCEeeeechhheecc
Confidence 69999999999999999975 8999999999999999999999984 444 999999999999999999999999
Q ss_pred CCcccCCceEEEEe--cC-------CCcccccCCCCCceEEecCCCCCCCCceeecCCCCceeEEEeCCCCCceeccccc
Q psy18090 280 PKFYGDQNSFLFTL--KP-------DMKVFNSSGFNENFIYLNSNQQTLPNGLGFGGQFEYWGLWIDSEYGQGECNKTCS 350 (421)
Q Consensus 280 ~~~~Gd~~~FLFsl--~P-------~~~vy~~tg~n~~~~y~n~~~~~~p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~ 350 (421)
++|||.++||||.+ .| ++.+|+.+|.+..-+||. |..|+|||+.++|+||||..+..|.|+ +|.
T Consensus 115 ~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt------~~FlafG~g~grygLl~d~sLl~g~S~-p~~ 187 (212)
T COG5142 115 RHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCT------PDFLAFGCGGGRYGLLIDKSLLDGESH-PVE 187 (212)
T ss_pred CCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEc------hHHhhhcCCCCcEEEEecCcccccccC-CCc
Confidence 99999999999999 45 578899999999999997 478999999999999999999999998 899
Q ss_pred ccCCCCCCCCCCC-eeEEEEEEEEec
Q psy18090 351 TFKDYQMLSHDKH-FKIMHIELWGVG 375 (421)
Q Consensus 351 Tf~~~~~Ls~~~~-F~I~~iEVWg~g 375 (421)
||+ |.+|+.... |.|..+|||-|+
T Consensus 188 tfg-N~~Ls~~g~~f~Iv~lElW~v~ 212 (212)
T COG5142 188 TFG-NCLLSSKGHFFRIVYLELWLVQ 212 (212)
T ss_pred ccc-ccccccCCCceEEEEEEEEeeC
Confidence 999 999988754 599999999875
No 7
>KOG2801|consensus
Probab=99.87 E-value=7.8e-24 Score=201.52 Aligned_cols=171 Identities=27% Similarity=0.455 Sum_probs=141.2
Q ss_pred CCcccCCCHHHHHHHHHhcCcccc-CceeEEEeeccccchHHHHHHHhccCCCEEEEEEcCCccEEEeeccCCcccCC--
Q psy18090 204 SFTMSILDYSHIMFLNLNLMPEFQ-KQWRLLFSSQFQGESFTRLMACAINQGPLLVLVKDDKANIFGAYASTNLTLCP-- 280 (421)
Q Consensus 204 ~~~s~iL~~~~~~~L~~~LP~~~~-~~w~LLYss~~hG~S~~~f~~~~~~~gPtlllIk~~~g~VFG~y~s~~w~~~~-- 280 (421)
.|.|.|++...+..||+|+|.++. ...-|||+|-+||+|+.+|+-.|.++.||+++|+++...|.|+|.+..|...+
T Consensus 339 nfrseivsvremrdiwswvperfalcqplllfsslqhgyslarfyfqcegheptllliktmqkevcgaylstdwsernkf 418 (559)
T KOG2801|consen 339 NFRSEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHEPTLLLIKTMQKEVCGAYLSTDWSERNKF 418 (559)
T ss_pred hhhhhhhhHHHHhhHHHhhhHHHhhhhHHHHHHHhhcchhhhhheeeccCCCCeeehHHHHHHHHhhHhcccchhhhccc
Confidence 356689999999999999999875 77889999999999999999999999999999999999999999999999753
Q ss_pred ----CcccCCceEEEEecCCCcccccCCC-------C------------------------CceE---EecCCC--CC--
Q psy18090 281 ----KFYGDQNSFLFTLKPDMKVFNSSGF-------N------------------------ENFI---YLNSNQ--QT-- 318 (421)
Q Consensus 281 ----~~~Gd~~~FLFsl~P~~~vy~~tg~-------n------------------------~~~~---y~n~~~--~~-- 318 (421)
.|||+++||+|++.|..+.|.|.-. . ..|. -+|... .+
T Consensus 419 ggklgffgtgecfvfrlqpevqryewvvikhpeltkppplmaaeptaplshsassdpadrlspflaarhfnlpsktesmf 498 (559)
T KOG2801|consen 419 GGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKPPPLMAAEPTAPLSHSASSDPADRLSPFLAARHFNLPSKTESMF 498 (559)
T ss_pred CceecccccccEEEEEechhhheeeEEEEcCcccCCCCCcccCCCCCCCCccccCCchhhcChHHHHHhcCCCcchhHHH
Confidence 6899999999999999888876410 0 0000 011111 11
Q ss_pred C---CCceeecCCCCceeEEEeCCCCCceecccccccCCCCCCCCCCCeeEEEEEEEEecCCCC
Q psy18090 319 L---PNGLGFGGQFEYWGLWIDSEYGQGECNKTCSTFKDYQMLSHDKHFKIMHIELWGVGIPPP 379 (421)
Q Consensus 319 ~---p~Gl~fGg~~~~~~L~id~d~~~g~s~~~c~Tf~~~~~Ls~~~~F~I~~iEVWg~g~~~~ 379 (421)
| .+.|..||+ |+-+||||.|+.+|.++ +|.||+ |.+|+ .++|.|..||.||+. |++
T Consensus 499 maggsdclivggg-ggqalyidgdlnrgrts-hcdtfn-nqplc-senfliaaveawgfq-dpd 557 (559)
T KOG2801|consen 499 MAGGSDCLIVGGG-GGQALYIDGDLNRGRTS-HCDTFN-NQPLC-SENFLIAAVEAWGFQ-DPD 557 (559)
T ss_pred hcCCCceEEEcCC-CceeEEecccccCCccc-cccccC-CCccc-hhhHHHHHHHHhcCC-CCC
Confidence 1 245778877 56899999999999998 999999 99996 578999999999999 764
No 8
>KOG0044|consensus
Probab=99.79 E-value=5e-19 Score=162.97 Aligned_cols=149 Identities=13% Similarity=0.151 Sum_probs=129.3
Q ss_pred ccCCccchHHH-hhh-cCC-CCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHH
Q psy18090 21 RKIKPEDVKKI-KSL-TNG-KDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDR 93 (421)
Q Consensus 21 ~~~~~~~~~~~-~~~-~~~-~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eE 93 (421)
.| .+.|..+. +.. +.- +|.+++++|++||.++||.+.+..++.+||+. .++.|+|++||+++|+++|||.+|
T Consensus 22 ~f-~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ee 100 (193)
T KOG0044|consen 22 KF-SKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEE 100 (193)
T ss_pred CC-CHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHH
Confidence 34 44444444 332 333 39999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHhhCCcc-------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHH
Q psy18090 94 KVEILLCFIGSYG-------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFD 163 (421)
Q Consensus 94 k~~~i~~m~d~~~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ 163 (421)
|++|+|+|||.++ ||.+|+.+++.++... ..+..+.+++++|+.+|+ ++.|+.+|.+
T Consensus 101 kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~-------------~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~e 167 (193)
T KOG0044|consen 101 KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSK-------------ALPEDEETPEERVDKIFSKMDKNKDGKLTLE 167 (193)
T ss_pred HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccc-------------cCCcccccHHHHHHHHHHHcCCCCCCcccHH
Confidence 9999999999987 8999999999888762 123567899999999998 8899999999
Q ss_pred HHHHHHhhchhHHHHHHHHH
Q psy18090 164 SLQKWLSTTHEIAYLHKYVL 183 (421)
Q Consensus 164 ef~~Wl~~~P~i~~~L~~~~ 183 (421)
+|.+.+..+|.|..+|+...
T Consensus 168 ef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 168 EFIEGCKADPSILRALEQDP 187 (193)
T ss_pred HHHHHhhhCHHHHHHhhhcc
Confidence 99999999999999887543
No 9
>KOG0034|consensus
Probab=99.14 E-value=2.3e-10 Score=105.49 Aligned_cols=122 Identities=13% Similarity=0.170 Sum_probs=92.8
Q ss_pred CCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCc-eeHhHHHHHHHHhh-CCCHHHHHHHHHHhhCCcc----
Q psy18090 37 GKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEK-IDLSTFISLYYELD-GSNIDRKVEILLCFIGSYG---- 106 (421)
Q Consensus 37 ~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~-I~~e~Fv~~ls~~~-rGt~eEk~~~i~~m~d~~~---- 106 (421)
++|.+|+++|..+. .....-++.|+++. .++. |+|++||..+++.. ++..++|+.++|++||.++
T Consensus 47 ~~g~lt~eef~~i~-----~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I 121 (187)
T KOG0034|consen 47 GDGYLTKEEFLSIP-----ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFI 121 (187)
T ss_pred ccCccCHHHHHHHH-----HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcC
Confidence 55999999996554 22233334444443 4555 99999999999776 7777779999999999987
Q ss_pred ---hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHHHHHhhchhHHHHHH
Q psy18090 107 ---DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQKWLSTTHEIAYLHK 180 (421)
Q Consensus 107 ---el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~~Wl~~~P~i~~~L~ 180 (421)
|+.+++.++++.-.. . .+...+.+++.++. .+.|+.|+++||.+.+.+.|.+.+.++
T Consensus 122 ~reel~~iv~~~~~~~~~---------------~--~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~m~ 184 (187)
T KOG0034|consen 122 SREELKQILRMMVGENDD---------------M--SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEKMT 184 (187)
T ss_pred cHHHHHHHHHHHHccCCc---------------c--hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHHcC
Confidence 788877777651111 0 25688889999987 779999999999999999999987654
No 10
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.92 E-value=8.3e-09 Score=92.49 Aligned_cols=130 Identities=9% Similarity=0.171 Sum_probs=102.8
Q ss_pred ccccCCccchHHHhhh-----cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC-C--CCceeHhHHHHHHHHhh-CC
Q psy18090 19 LSRKIKPEDVKKIKSL-----TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD-K--TEKIDLSTFISLYYELD-GS 89 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~-----~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~-~--~~~I~~e~Fv~~ls~~~-rG 89 (421)
-+.| .+++..+++.+ .++.|.|+..+|..++. ++|...++..+.++|.. + .+.|+|++|+..|+..+ ++
T Consensus 11 ~~~~-t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr-~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~~ 88 (160)
T COG5126 11 FTQL-TEEQIQELKEAFQLFDRDSDGLIDRNELGKILR-SLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKRG 88 (160)
T ss_pred cccC-CHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHH-HcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhccC
Confidence 3556 67776777443 56679999999999998 99999999999999999 4 39999999999999887 88
Q ss_pred CHHHHHHHHHHhhCCcc-------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCc
Q psy18090 90 NIDRKVEILLCFIGSYG-------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNE 159 (421)
Q Consensus 90 t~eEk~~~i~~m~d~~~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~ 159 (421)
..+|++.|+|+.||.++ +|..++.. .. +.....-++.|+. ++++|.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~----lg--------------------e~~~deev~~ll~~~d~d~dG~ 144 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKS----LG--------------------ERLSDEEVEKLLKEYDEDGDGE 144 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHh----hc--------------------ccCCHHHHHHHHHhcCCCCCce
Confidence 88999999999999987 55555541 11 2233444555544 778999
Q ss_pred cCHHHHHHHHhhchh
Q psy18090 160 ITFDSLQKWLSTTHE 174 (421)
Q Consensus 160 is~~ef~~Wl~~~P~ 174 (421)
|++++|.+.+...|.
T Consensus 145 i~~~eF~~~~~~~~~ 159 (160)
T COG5126 145 IDYEEFKKLIKDSPT 159 (160)
T ss_pred EeHHHHHHHHhccCC
Confidence 999999998876654
No 11
>PTZ00183 centrin; Provisional
Probab=97.95 E-value=7.5e-05 Score=65.87 Aligned_cols=129 Identities=12% Similarity=0.096 Sum_probs=86.4
Q ss_pred CccchHHHhh----h-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHh-hCCCHHH
Q psy18090 24 KPEDVKKIKS----L-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYEL-DGSNIDR 93 (421)
Q Consensus 24 ~~~~~~~~~~----~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~-~rGt~eE 93 (421)
.|++..++.. + .++.|.|+.++|.++.+.. +..+....+..+|.. +++.|++++|+..+... .....++
T Consensus 12 ~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 90 (158)
T PTZ00183 12 TEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSL-GFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPRE 90 (158)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHH
Confidence 6677777733 3 4566999999998887532 333445555555544 88999999999987754 3556678
Q ss_pred HHHHHHHhhCCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHH
Q psy18090 94 KVEILLCFIGSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQ 166 (421)
Q Consensus 94 k~~~i~~m~d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~ 166 (421)
.++.+|+++|.++ +..+|...+... .. .-.+.. ++.+|. ++.++.|++++|.
T Consensus 91 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~----------------~l~~~~----~~~~~~~~d~~~~g~i~~~ef~ 149 (158)
T PTZ00183 91 EILKAFRLFDDDKTGKISLKNLKRVAKEL-GE----------------TITDEE----LQEMIDEADRNGDGEISEEEFY 149 (158)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CC----------------CCCHHH----HHHHHHHhCCCCCCcCcHHHHH
Confidence 8999999999886 444444443321 10 011222 344443 6678899999999
Q ss_pred HHHhhchh
Q psy18090 167 KWLSTTHE 174 (421)
Q Consensus 167 ~Wl~~~P~ 174 (421)
.-+...|.
T Consensus 150 ~~~~~~~~ 157 (158)
T PTZ00183 150 RIMKKTNL 157 (158)
T ss_pred HHHhcccC
Confidence 99888775
No 12
>PTZ00184 calmodulin; Provisional
Probab=97.68 E-value=0.00055 Score=59.39 Aligned_cols=124 Identities=10% Similarity=0.154 Sum_probs=79.7
Q ss_pred CccchHHH----hhh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhh-CCCHHH
Q psy18090 24 KPEDVKKI----KSL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELD-GSNIDR 93 (421)
Q Consensus 24 ~~~~~~~~----~~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~-rGt~eE 93 (421)
.+++.+.+ +.+ ..+.|.|+.++|..+... ++.......+..+|+. .++.|+|++|+..+.... ....++
T Consensus 6 ~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~ 84 (149)
T PTZ00184 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEE 84 (149)
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHH
Confidence 55666666 333 556699999999877643 2333344455666654 788999999999987553 467778
Q ss_pred HHHHHHHhhCCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHH
Q psy18090 94 KVEILLCFIGSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQ 166 (421)
Q Consensus 94 k~~~i~~m~d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~ 166 (421)
++..+|+.+|.++ ...++...+.. +. .. .....++.++. +++++.|++++|.
T Consensus 85 ~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~----------------~~----~~~~~~~~~~~~~d~~~~g~i~~~ef~ 143 (149)
T PTZ00184 85 EIKEAFKVFDRDGNGFISAAELRHVMTN-LG----------------EK----LTDEEVDEMIREADVDGDGQINYEEFV 143 (149)
T ss_pred HHHHHHHhhCCCCCCeEeHHHHHHHHHH-HC----------------CC----CCHHHHHHHHHhcCCCCCCcCcHHHHH
Confidence 9999999999876 23333222211 11 11 11223444444 6778899999997
Q ss_pred HHH
Q psy18090 167 KWL 169 (421)
Q Consensus 167 ~Wl 169 (421)
.-+
T Consensus 144 ~~~ 146 (149)
T PTZ00184 144 KMM 146 (149)
T ss_pred HHH
Confidence 765
No 13
>KOG0038|consensus
Probab=95.81 E-value=0.031 Score=49.31 Aligned_cols=94 Identities=12% Similarity=0.208 Sum_probs=70.1
Q ss_pred hhcCC-CCCceeHhHHHHHHHHhh-CCCHHHHHHHHHHhhCCcc-------hHHHHHHHHHHhhhhhhcccchhhhhhcc
Q psy18090 65 YYFPD-KTEKIDLSTFISLYYELD-GSNIDRKVEILLCFIGSYG-------DLINYVQALLNSCLFIYQSRDDKELWSSL 135 (421)
Q Consensus 65 ~lF~~-~~~~I~~e~Fv~~ls~~~-rGt~eEk~~~i~~m~d~~~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~ 135 (421)
-+|.. ..|.++|+.|+-.+|+++ ..-.+=|+..+|++||.++ ++.+-+..+-. +++
T Consensus 78 e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr---------~eL------ 142 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTR---------DEL------ 142 (189)
T ss_pred HHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhh---------ccC------
Confidence 34555 889999999999999887 4555679999999999987 34433333221 111
Q ss_pred cCCCCcccHHHHHHHHhc---cCCCCccCHHHHHHHHhhchhHHH
Q psy18090 136 NIDSDKGSLIVYANYLCM---GDCNNEITFDSLQKWLSTTHEIAY 177 (421)
Q Consensus 136 ~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~~Wl~~~P~i~~ 177 (421)
++.-++..++.+.. -++|+.+++.+|++-+.+.|.+..
T Consensus 143 ----s~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPDFls 183 (189)
T KOG0038|consen 143 ----SDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAPDFLS 183 (189)
T ss_pred ----CHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcchHh
Confidence 34567777788766 668999999999999999998764
No 14
>KOG2562|consensus
Probab=95.59 E-value=0.052 Score=56.07 Aligned_cols=125 Identities=12% Similarity=0.139 Sum_probs=92.4
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcC----C----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFP----D----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~----~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~ 106 (421)
++-.|.|++++| +.|=..++..-++.|+|. + .+|.++|++||-++--+.--....-++..|+++|+++
T Consensus 289 ~Dhd~lidk~~L----~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~ 364 (493)
T KOG2562|consen 289 TDHDGLIDKEDL----KRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDG 364 (493)
T ss_pred cccccccCHHHH----HHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccC
Confidence 344488999999 366667788999999999 2 7888999999999655554455577899999999987
Q ss_pred -------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc--cC-CCCccCHHHHHHHHhhchhHH
Q psy18090 107 -------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM--GD-CNNEITFDSLQKWLSTTHEIA 176 (421)
Q Consensus 107 -------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~--k~-~d~~is~~ef~~Wl~~~P~i~ 176 (421)
||+-|-+++..-+.. +...+..++....+++. |+ .++.||+++|.. ++-.-.+.
T Consensus 365 ~G~Lt~~el~~fyeeq~~rm~~---------------~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~-skl~~~v~ 428 (493)
T KOG2562|consen 365 DGILTLNELRYFYEEQLQRMEC---------------MGQEALPFEDALCQIRDMVKPEDENKITLQDLKG-SKLAGTVF 428 (493)
T ss_pred CCcccHHHHHHHHHHHHHHHHh---------------cCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh-ccccchhh
Confidence 787777776654332 33446788889999987 64 467899999988 43343444
Q ss_pred HHH
Q psy18090 177 YLH 179 (421)
Q Consensus 177 ~~L 179 (421)
.+|
T Consensus 429 n~l 431 (493)
T KOG2562|consen 429 NIL 431 (493)
T ss_pred hhh
Confidence 333
No 15
>KOG0044|consensus
Probab=95.07 E-value=0.26 Score=45.94 Aligned_cols=111 Identities=14% Similarity=0.239 Sum_probs=83.5
Q ss_pred CccchHHHhhhcCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCCCCCceeHhHHHHHHHHhh-CCCHHHHHHHHHHhh
Q psy18090 24 KPEDVKKIKSLTNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPDKTEKIDLSTFISLYYELD-GSNIDRKVEILLCFI 102 (421)
Q Consensus 24 ~~~~~~~~~~~~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~~~~~I~~e~Fv~~ls~~~-rGt~eEk~~~i~~m~ 102 (421)
.|+...++... ..++..++++.|+.|.. .+|+|.++.++|...|+.+- -|+++.-+..+|+-+
T Consensus 10 ~~~~~e~l~~~----t~f~~~ei~~~Yr~Fk~------------~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~f 73 (193)
T KOG0044|consen 10 QPESLEQLVQQ----TKFSKKEIQQWYRGFKN------------ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTF 73 (193)
T ss_pred CcHHHHHHHHh----cCCCHHHHHHHHHHhcc------------cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHh
Confidence 45555555433 46889999988888876 34899999999999998665 799999999999999
Q ss_pred CCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHHHHHhh
Q psy18090 103 GSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQKWLST 171 (421)
Q Consensus 103 d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~~Wl~~ 171 (421)
|-++ +.++||-++-- . ...+++..++-.|. .+++|.||.+|+.+-++.
T Consensus 74 D~~~dg~i~F~Efi~als~--~-------------------~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 74 DKNKDGTIDFLEFICALSL--T-------------------SRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQA 128 (193)
T ss_pred cccCCCCcCHHHHHHHHHH--H-------------------cCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHH
Confidence 9987 67777666521 1 12355555666666 889999999997766643
No 16
>KOG0027|consensus
Probab=94.90 E-value=0.37 Score=42.63 Aligned_cols=110 Identities=13% Similarity=0.155 Sum_probs=72.0
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCC-CH----HHHHHHHHHhhCCc
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGS-NI----DRKVEILLCFIGSY 105 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rG-t~----eEk~~~i~~m~d~~ 105 (421)
.++.|.|+.++|..+..+.-.. ..+.-+..++.. .++.|+|++|+..+...... +. .+.+.-+|+++|.+
T Consensus 19 ~d~~G~i~~~el~~~lr~lg~~-~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d 97 (151)
T KOG0027|consen 19 KDGDGKISVEELGAVLRSLGQN-PTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKD 97 (151)
T ss_pred CCCCCcccHHHHHHHHHHcCCC-CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccC
Confidence 5566999999998776544333 334445555544 68999999999998755543 22 34889999999998
Q ss_pred c-------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHHHHH
Q psy18090 106 G-------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQKWL 169 (421)
Q Consensus 106 ~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~~Wl 169 (421)
+ |++.++..+-. +.+ ..-.+.++. .++|+.|++++|..-+
T Consensus 98 ~~G~Is~~el~~~l~~lg~-----------------------~~~-~~e~~~mi~~~d~d~dg~i~f~ef~~~m 147 (151)
T KOG0027|consen 98 GDGFISASELKKVLTSLGE-----------------------KLT-DEECKEMIREVDVDGDGKVNFEEFVKMM 147 (151)
T ss_pred CCCcCcHHHHHHHHHHhCC-----------------------cCC-HHHHHHHHHhcCCCCCCeEeHHHHHHHH
Confidence 7 56655544321 112 223344443 5689999888876544
No 17
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=94.63 E-value=0.041 Score=44.04 Aligned_cols=51 Identities=29% Similarity=0.375 Sum_probs=37.6
Q ss_pred CCCCcccHHHHHHHHHhhccchhH----HHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 36 NGKDVLTKVDVFELWSMEIKDSLI----NFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 36 ~~~g~is~e~~~~~~~~~~~~~l~----~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
+++|.|+.++|.++++..++..+. +..+..++.. .++.|+|++|+..+..+
T Consensus 22 ~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 22 GDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred CCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 477999999999998765554332 4455555544 78999999999987655
No 18
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=94.62 E-value=0.047 Score=40.97 Aligned_cols=49 Identities=12% Similarity=0.249 Sum_probs=38.5
Q ss_pred cCCCCcccHHHHHHHHHhhcc---chhHHHHHhhhcCC----CCCceeHhHHHHHH
Q psy18090 35 TNGKDVLTKVDVFELWSMEIK---DSLINFYLKYYFPD----KTEKIDLSTFISLY 83 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~---~~l~~~~~~~lF~~----~~~~I~~e~Fv~~l 83 (421)
.++.|.|+.++|.++.+.... ......++..+|.. .+|.|++++|+.++
T Consensus 11 ~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 11 KDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp TTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 466799999999988876543 45667777777776 89999999998764
No 19
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=94.43 E-value=0.035 Score=40.10 Aligned_cols=45 Identities=16% Similarity=0.174 Sum_probs=31.9
Q ss_pred CcccHHHHHHHHHhhccch-hHHHHHhhhcCC----CCCceeHhHHHHHHH
Q psy18090 39 DVLTKVDVFELWSMEIKDS-LINFYLKYYFPD----KTEKIDLSTFISLYY 84 (421)
Q Consensus 39 g~is~e~~~~~~~~~~~~~-l~~~~~~~lF~~----~~~~I~~e~Fv~~ls 84 (421)
|.|+.++|..++ +.++.. +.+.-+..+|.. .+|.|+|++|+..+.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 678888888887 444444 555556666666 788888888887753
No 20
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=94.28 E-value=0.045 Score=44.26 Aligned_cols=51 Identities=20% Similarity=0.273 Sum_probs=40.1
Q ss_pred CCcccHHHHHHHHHhhccchhH----HHHHhhhcCC----CCCceeHhHHHHHHHHhhC
Q psy18090 38 KDVLTKVDVFELWSMEIKDSLI----NFYLKYYFPD----KTEKIDLSTFISLYYELDG 88 (421)
Q Consensus 38 ~g~is~e~~~~~~~~~~~~~l~----~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~r 88 (421)
+|.|+.++|..+.+..+++.+. +..+..+|.. .++.|+|++|+..+..+.+
T Consensus 24 ~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 24 PDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred cccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 4899999999998766666554 6667777766 7899999999998875543
No 21
>PTZ00184 calmodulin; Provisional
Probab=94.26 E-value=0.24 Score=42.62 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=59.2
Q ss_pred CCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----h
Q psy18090 36 NGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----D 107 (421)
Q Consensus 36 ~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----e 107 (421)
.+.|.|+.++|..++...........-+..+|.. .++.|+.++|..++..+-.+..++.+.-++..+|.++ .
T Consensus 59 ~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~ 138 (149)
T PTZ00184 59 DGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138 (149)
T ss_pred CCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCc
Confidence 4458999999998887766544445555555555 7899999999999877655667777888888888765 5
Q ss_pred HHHHHHHH
Q psy18090 108 LINYVQAL 115 (421)
Q Consensus 108 l~~~ve~l 115 (421)
..+|+..+
T Consensus 139 ~~ef~~~~ 146 (149)
T PTZ00184 139 YEEFVKMM 146 (149)
T ss_pred HHHHHHHH
Confidence 66666554
No 22
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=94.20 E-value=0.067 Score=43.73 Aligned_cols=58 Identities=21% Similarity=0.197 Sum_probs=36.4
Q ss_pred CccchHHHh----hh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHH
Q psy18090 24 KPEDVKKIK----SL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYY 84 (421)
Q Consensus 24 ~~~~~~~~~----~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls 84 (421)
.++++..++ .+ .++.|.|+.++|.+++... ++++..+..+|.. .++.|+|++|+..+.
T Consensus 5 s~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~---~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 5 SPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKS---GLPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred CHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 455566663 23 4566888888888777542 2344445555544 678888888887764
No 23
>KOG0034|consensus
Probab=93.53 E-value=0.47 Score=43.98 Aligned_cols=81 Identities=9% Similarity=0.040 Sum_probs=63.6
Q ss_pred CCCc-ccHHHHHHHHHhhccchhHH---HHHhhhcCC-CCCceeHhHHHHHHHHhhCC-CH------HHHHHHHHHhhCC
Q psy18090 37 GKDV-LTKVDVFELWSMEIKDSLIN---FYLKYYFPD-KTEKIDLSTFISLYYELDGS-NI------DRKVEILLCFIGS 104 (421)
Q Consensus 37 ~~g~-is~e~~~~~~~~~~~~~l~~---~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rG-t~------eEk~~~i~~m~d~ 104 (421)
+.+. |+.++|....+-|.+.+... .++.++|+. ++|.|++|++.+.+..+... .. ++.++.+|..+|.
T Consensus 79 ~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~ 158 (187)
T KOG0034|consen 79 GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADT 158 (187)
T ss_pred CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCC
Confidence 3344 99999999999999988777 567777777 99999999999999877764 33 2445778888888
Q ss_pred cc----hHHHHHHHHHH
Q psy18090 105 YG----DLINYVQALLN 117 (421)
Q Consensus 105 ~~----el~~~ve~lv~ 117 (421)
++ .+.+|+..+.+
T Consensus 159 d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 159 DGDGKISFEEFCKVVEK 175 (187)
T ss_pred CCCCcCcHHHHHHHHHc
Confidence 77 57788777654
No 24
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=93.29 E-value=0.099 Score=42.54 Aligned_cols=50 Identities=24% Similarity=0.303 Sum_probs=38.1
Q ss_pred CCCCcccHHHHHHHHHhhccchhHH-HHHhhhcCC----CCCceeHhHHHHHHHH
Q psy18090 36 NGKDVLTKVDVFELWSMEIKDSLIN-FYLKYYFPD----KTEKIDLSTFISLYYE 85 (421)
Q Consensus 36 ~~~g~is~e~~~~~~~~~~~~~l~~-~~~~~lF~~----~~~~I~~e~Fv~~ls~ 85 (421)
+|+|.|+.++|+.+-++-+|+-+.. .-+..++.. .|+.|+|++|+..+.-
T Consensus 21 ~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 21 GGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred CCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 5779999999998887756654444 556666644 8999999999887643
No 25
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=93.23 E-value=0.16 Score=41.45 Aligned_cols=55 Identities=22% Similarity=0.335 Sum_probs=41.9
Q ss_pred hhhcCCCCcccHHHHHHHHHhhccchhH----HHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 32 KSLTNGKDVLTKVDVFELWSMEIKDSLI----NFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 32 ~~~~~~~g~is~e~~~~~~~~~~~~~l~----~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
.+-++.++++++.+|+++-+.-+|.-+. +..+..++.. .|+.|+|++|+..++.+
T Consensus 15 hkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 15 HKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3346666899999999888766664333 5677888866 89999999999987644
No 26
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=92.94 E-value=0.16 Score=37.80 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=34.8
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
.++.|.|+.++|.+++... ++++..+..+|.. .++.|+|++|+..++..
T Consensus 10 ~~~~G~i~~~el~~~l~~~---g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 10 PDGDGLISGDEARPFLGKS---GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred CCCCCcCcHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3456899999998877542 2344555555554 78899999999987644
No 27
>PTZ00183 centrin; Provisional
Probab=92.81 E-value=0.44 Score=41.58 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=53.4
Q ss_pred CCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc
Q psy18090 36 NGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 36 ~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~ 106 (421)
.+.|.|+.++|...+........+..-+..+|.. .++.|++++|..++..+-.+-.++.+.-+|..++.++
T Consensus 65 ~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~ 139 (158)
T PTZ00183 65 DGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNG 139 (158)
T ss_pred CCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence 4568999999998876655444445455555554 7889999999999876656667777888888888775
No 28
>PLN02964 phosphatidylserine decarboxylase
Probab=92.80 E-value=0.31 Score=53.32 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=58.5
Q ss_pred cccCCccchHHH----hhh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCC
Q psy18090 20 SRKIKPEDVKKI----KSL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSN 90 (421)
Q Consensus 20 ~~~~~~~~~~~~----~~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt 90 (421)
+.| .-.|..++ +.+ .++.|.+ +..+.+......+......++..+|.. .++.|+|++|+..+..+..+.
T Consensus 135 t~f-~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~ 212 (644)
T PLN02964 135 FDF-VTQEPESACESFDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV 212 (644)
T ss_pred hhc-cHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC
Confidence 455 44555566 323 4445666 333322211112333333345555544 789999999999998877778
Q ss_pred HHHHHHHHHHhhCCcc-------hHHHHHHH
Q psy18090 91 IDRKVEILLCFIGSYG-------DLINYVQA 114 (421)
Q Consensus 91 ~eEk~~~i~~m~d~~~-------el~~~ve~ 114 (421)
.+|.+..+|+.+|.++ |+.+++..
T Consensus 213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 213 AANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 9999999999999877 55555544
No 29
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=92.32 E-value=0.19 Score=40.68 Aligned_cols=49 Identities=22% Similarity=0.381 Sum_probs=38.5
Q ss_pred CCcccHHHHHHHHHhh--ccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 38 KDVLTKVDVFELWSME--IKDSLINFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 38 ~g~is~e~~~~~~~~~--~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
+|.|+.++|+++++.. ++..+.+.-+..++.. .++.|+|++|+..+..+
T Consensus 26 ~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 26 KNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred CCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 6899999999999643 5666666677777755 78999999999887544
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=91.84 E-value=0.28 Score=36.63 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=38.1
Q ss_pred HHHHHHHhhCCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHH
Q psy18090 94 KVEILLCFIGSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQ 166 (421)
Q Consensus 94 k~~~i~~m~d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~ 166 (421)
|+.-+|+++|.++ ...++...+...... ..+..+...++.+|. ++.|+.|+++||.
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~ 63 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRD-----------------MSDEESDEMIDQIFREFDTDGDGRISFDEFL 63 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH-----------------STHHHHHHHHHHHHHHHTTTSSSSEEHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccc-----------------ccHHHHHHHHHHHHHHhCCCCcCCCcHHHHh
Confidence 5677888888876 344433333321111 013456667888877 8889999999998
Q ss_pred HHH
Q psy18090 167 KWL 169 (421)
Q Consensus 167 ~Wl 169 (421)
.++
T Consensus 64 ~~~ 66 (66)
T PF13499_consen 64 NFM 66 (66)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 31
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=91.27 E-value=0.29 Score=39.72 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=35.5
Q ss_pred CCC-CcccHHHHHHHHHhhccc----hhHHHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 36 NGK-DVLTKVDVFELWSMEIKD----SLINFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 36 ~~~-g~is~e~~~~~~~~~~~~----~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
+|. +.||++||+.+.+..+|. ...+.-+..++.. ++|.|+|++|+..+..+
T Consensus 22 dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 22 DGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred CCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 454 599999999888776542 2223445555544 89999999999886543
No 32
>KOG4347|consensus
Probab=90.75 E-value=0.32 Score=52.28 Aligned_cols=64 Identities=13% Similarity=0.128 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc
Q psy18090 43 KVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 43 ~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~ 106 (421)
.+.|.+.++.-.|-+-...++.|||+- .++.++|.+||.+++.+..|.+-||++++|+|+++++
T Consensus 537 ~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~ 604 (671)
T KOG4347|consen 537 YAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPA 604 (671)
T ss_pred HhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCc
Confidence 333433333333434445567777776 7889999999999999999999999999999999987
No 33
>KOG0036|consensus
Probab=90.64 E-value=3.3 Score=42.67 Aligned_cols=129 Identities=11% Similarity=-0.000 Sum_probs=80.3
Q ss_pred hhh-cCCCCcccHHHHHHHHHhh-ccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCc
Q psy18090 32 KSL-TNGKDVLTKVDVFELWSME-IKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSY 105 (421)
Q Consensus 32 ~~~-~~~~g~is~e~~~~~~~~~-~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~ 105 (421)
+.+ +++.|.++..++.+-...- .| .-+...+.-+|.. +|+.|+|++|..-+. ..|.++--+|+-+|.+
T Consensus 21 ~~lD~~~~g~~d~~~l~k~~~~l~~~-~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~l~~~F~~iD~~ 94 (463)
T KOG0036|consen 21 KELDSKNDGQVDLDQLEKGLEKLDHP-KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKELELYRIFQSIDLE 94 (463)
T ss_pred HHhccCCCCceeHHHHHHHHHhcCCC-CCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHHHHHHHHhhhccc
Confidence 555 4555999999997665322 22 2344555666655 899999999998764 3677888888888887
Q ss_pred c----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhccCCCCccCHHHHHHHHhhchhHHHHHHH
Q psy18090 106 G----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCMGDCNNEITFDSLQKWLSTTHEIAYLHKY 181 (421)
Q Consensus 106 ~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~k~~d~~is~~ef~~Wl~~~P~i~~~L~~ 181 (421)
. .+.++-+++...=+. -+.+-.+++++.++ +++...|+++|+.+...-.| ..-+..
T Consensus 95 hdG~i~~~Ei~~~l~~~gi~-----------------l~de~~~k~~e~~d-~~g~~~I~~~e~rd~~ll~p--~s~i~d 154 (463)
T KOG0036|consen 95 HDGKIDPNEIWRYLKDLGIQ-----------------LSDEKAAKFFEHMD-KDGKATIDLEEWRDHLLLYP--ESDLED 154 (463)
T ss_pred cCCccCHHHHHHHHHHhCCc-----------------cCHHHHHHHHHHhc-cCCCeeeccHHHHhhhhcCC--hhHHHH
Confidence 5 344433333321111 12223333333333 66778899999999998777 333444
Q ss_pred HHHhh
Q psy18090 182 VLSHM 186 (421)
Q Consensus 182 ~~~~~ 186 (421)
++++|
T Consensus 155 i~~~W 159 (463)
T KOG0036|consen 155 IYDFW 159 (463)
T ss_pred HHHhh
Confidence 54544
No 34
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=90.02 E-value=0.37 Score=38.96 Aligned_cols=51 Identities=18% Similarity=0.272 Sum_probs=35.4
Q ss_pred cCCCC-cccHHHHHHHHHhhccc----hhHHHHHhhhcCC----CCCceeHhHHHHHHHH
Q psy18090 35 TNGKD-VLTKVDVFELWSMEIKD----SLINFYLKYYFPD----KTEKIDLSTFISLYYE 85 (421)
Q Consensus 35 ~~~~g-~is~e~~~~~~~~~~~~----~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~ 85 (421)
.+|.| .|+.++|+.+++..++. ..++..+..+|.. .++.|+|++|+..+..
T Consensus 21 ~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 21 KEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred ccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 35668 59999999998764433 1234555555544 7888999999887653
No 35
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=90.02 E-value=0.39 Score=39.02 Aligned_cols=49 Identities=22% Similarity=0.411 Sum_probs=35.3
Q ss_pred CC-CCcccHHHHHHHHHhhc----cchhHHHHHhhhcCC----CCCceeHhHHHHHHH
Q psy18090 36 NG-KDVLTKVDVFELWSMEI----KDSLINFYLKYYFPD----KTEKIDLSTFISLYY 84 (421)
Q Consensus 36 ~~-~g~is~e~~~~~~~~~~----~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls 84 (421)
+| .|.|+.++|+.++...+ +....+..+..++.. .++.|+|++|+..+.
T Consensus 21 dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 21 DGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred CCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 54 69999999999887533 333455566666544 788999999987653
No 36
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=88.76 E-value=1.6 Score=39.38 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=64.9
Q ss_pred CCCcccHHHHHHHHHhhccchhHHHH---HhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----hH
Q psy18090 37 GKDVLTKVDVFELWSMEIKDSLINFY---LKYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----DL 108 (421)
Q Consensus 37 ~~g~is~e~~~~~~~~~~~~~l~~~~---~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----el 108 (421)
|.+.|+.++|..++........++.= +.++|+. .+|+|+..+++..+..+---.++|..+-+++.++.++ ..
T Consensus 68 ~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~ 147 (160)
T COG5126 68 GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDY 147 (160)
T ss_pred CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeH
Confidence 66899999999998877755543332 4566666 9999999999999988887788888888999999865 67
Q ss_pred HHHHHHHHH
Q psy18090 109 INYVQALLN 117 (421)
Q Consensus 109 ~~~ve~lv~ 117 (421)
.+|++.+..
T Consensus 148 ~eF~~~~~~ 156 (160)
T COG5126 148 EEFKKLIKD 156 (160)
T ss_pred HHHHHHHhc
Confidence 888887654
No 37
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=88.75 E-value=0.6 Score=37.75 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=36.4
Q ss_pred CCCC-cccHHHHHHHHHh----hccchhHHHHHhhhcCC----CCCceeHhHHHHHHH
Q psy18090 36 NGKD-VLTKVDVFELWSM----EIKDSLINFYLKYYFPD----KTEKIDLSTFISLYY 84 (421)
Q Consensus 36 ~~~g-~is~e~~~~~~~~----~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls 84 (421)
+|.| .|+.++|+.+-+. +++....+..+..++.. .++.|+|++|+..+.
T Consensus 21 dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 21 EGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred CCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 5678 6999999988877 45554455556666655 788999999987764
No 38
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=88.70 E-value=0.61 Score=37.98 Aligned_cols=51 Identities=24% Similarity=0.358 Sum_probs=34.7
Q ss_pred CCCC-cccHHHHHHHHHhhcc----chhHHHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 36 NGKD-VLTKVDVFELWSMEIK----DSLINFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 36 ~~~g-~is~e~~~~~~~~~~~----~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
+|.| +||.++|+++.+..++ ....+.-+..++.. .++.|+|++|+..+..+
T Consensus 23 dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 23 EGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred CCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 4666 6999999988865332 22233345555554 78999999999887544
No 39
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=88.65 E-value=1.5 Score=31.43 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=36.4
Q ss_pred CCCceeHhHHHHHHHHhhCC-CHHHHHHHHHHhhCCcc----hHHHHHHHH
Q psy18090 70 KTEKIDLSTFISLYYELDGS-NIDRKVEILLCFIGSYG----DLINYVQAL 115 (421)
Q Consensus 70 ~~~~I~~e~Fv~~ls~~~rG-t~eEk~~~i~~m~d~~~----el~~~ve~l 115 (421)
+++.|+.++|..++..+-.. -.++.+..+|..+|.++ ...+|+..+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMM 51 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 47899999999999666445 55666999999999987 566766654
No 40
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=88.28 E-value=2.3 Score=34.68 Aligned_cols=80 Identities=14% Similarity=0.119 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhCCcc------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhcc-CCCCccCHHH
Q psy18090 92 DRKVEILLCFIGSYG------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCMG-DCNNEITFDS 164 (421)
Q Consensus 92 eEk~~~i~~m~d~~~------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~k-~~d~~is~~e 164 (421)
+||...+|++++-.. .+..++.+++.---. +. |. ..+ ..++.-+.+.|.. .....|+.++
T Consensus 2 ~dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~-vg---E~-----~aF----g~~e~sv~sCF~~~~~~~~I~~~~ 68 (90)
T PF09069_consen 2 EDKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRA-VG---EG-----PAF----GYIEPSVRSCFQQVQLSPKITENQ 68 (90)
T ss_dssp HHHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHH-TT----G-----GGG----T--HHHHHHHHHHTTT-S-B-HHH
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH-hC---cc-----ccc----cCcHHHHHHHhcccCCCCccCHHH
Confidence 689999999997543 355555555431111 11 00 011 2378888888884 3567799999
Q ss_pred HHHHHhhchhHHHHHHHHHHh
Q psy18090 165 LQKWLSTTHEIAYLHKYVLSH 185 (421)
Q Consensus 165 f~~Wl~~~P~i~~~L~~~~~~ 185 (421)
|.+|+...|+...-|. ++|+
T Consensus 69 Fl~wl~~ePq~lVWLP-~lhR 88 (90)
T PF09069_consen 69 FLDWLMSEPQSLVWLP-TLHR 88 (90)
T ss_dssp HHHHHHT--TTTTHHH-HHHH
T ss_pred HHHHHHhCCCeeeHHH-HHhh
Confidence 9999999998765443 4454
No 41
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=87.71 E-value=0.64 Score=38.97 Aligned_cols=59 Identities=20% Similarity=0.237 Sum_probs=42.2
Q ss_pred CccchHHH----hhhcCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHH
Q psy18090 24 KPEDVKKI----KSLTNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYE 85 (421)
Q Consensus 24 ~~~~~~~~----~~~~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~ 85 (421)
.++|+..- +.+..+.|.|+-++...++ ...+|+......+++. .+|.++++||++++..
T Consensus 5 s~~e~~~y~~~F~~l~~~~g~isg~~a~~~f---~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 5 SPEEKQKYDQIFQSLDPQDGKISGDQAREFF---MKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp SCCHHHHHHHHHHCTSSSTTEEEHHHHHHHH---HHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCeEeHHHHHHHH---HHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 56666665 4455566899999997654 3345666666666655 8999999999999753
No 42
>KOG4223|consensus
Probab=87.53 E-value=1.4 Score=43.97 Aligned_cols=110 Identities=17% Similarity=0.222 Sum_probs=70.3
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC--------CCCceeHhHHHHHHHHhhCCCHH------HHHHHHHH
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD--------KTEKIDLSTFISLYYELDGSNID------RKVEILLC 100 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~--------~~~~I~~e~Fv~~ls~~~rGt~e------Ek~~~i~~ 100 (421)
.+|.|.+|+++| ..|+-.-..+.|..-|-.- .||+|++++|+--|.-..+.+.| |+ +..+.
T Consensus 174 ~d~dg~lt~EEF----~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Er-e~F~~ 248 (325)
T KOG4223|consen 174 QDGDGSLTLEEF----TAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTER-EQFFE 248 (325)
T ss_pred cCCCCcccHHHH----HhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccH-HHHHH
Confidence 455689999999 4776655666666665543 89999999999998766553332 22 23344
Q ss_pred hhCCcchHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHH
Q psy18090 101 FIGSYGDLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQ 166 (421)
Q Consensus 101 m~d~~~el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~ 166 (421)
-+|.+++ ..| ...+++.|. .+..-...++=|..|+. ++.|+.+|.+|+.
T Consensus 249 ~~DknkD-------------G~L-~~dEl~~WI---~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl 300 (325)
T KOG4223|consen 249 FRDKNKD-------------GKL-DGDELLDWI---LPSEQDHAKAEARHLLHEADEDKDGKLSKEEIL 300 (325)
T ss_pred HhhcCCC-------------Ccc-CHHHHhccc---CCCCccHHHHHHHHHhhhhccCccccccHHHHh
Confidence 4454430 000 012234455 34445577888899976 7789999999953
No 43
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=87.23 E-value=0.92 Score=31.92 Aligned_cols=47 Identities=15% Similarity=0.213 Sum_probs=30.2
Q ss_pred CCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHH
Q psy18090 36 NGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLY 83 (421)
Q Consensus 36 ~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~l 83 (421)
+++|.|+.++|..+..... ...+...+..+|.. .++.|++++|+..+
T Consensus 12 ~~~g~l~~~e~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 12 DGDGTISADELKAALKSLG-EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred CCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4558888888887776542 22344444444444 67788888887654
No 44
>KOG0027|consensus
Probab=86.53 E-value=3.8 Score=36.11 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=63.5
Q ss_pred CccchHHH-hhh-cCCCCcccHHHHHHHHHhhccchhHH-------HHHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHH
Q psy18090 24 KPEDVKKI-KSL-TNGKDVLTKVDVFELWSMEIKDSLIN-------FYLKYYFPD-KTEKIDLSTFISLYYELDGSNIDR 93 (421)
Q Consensus 24 ~~~~~~~~-~~~-~~~~g~is~e~~~~~~~~~~~~~l~~-------~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eE 93 (421)
..+|...+ +.+ .+|.|.|+.++|..+........... .=+.++|+. .+|.|+.+++...+..+..--.++
T Consensus 42 t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~ 121 (151)
T KOG0027|consen 42 TEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDE 121 (151)
T ss_pred CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHH
Confidence 34444444 444 46779999999998876554432221 235577777 899999999999998777555577
Q ss_pred HHHHHHHhhCCcc----hHHHHHHHHH
Q psy18090 94 KVEILLCFIGSYG----DLINYVQALL 116 (421)
Q Consensus 94 k~~~i~~m~d~~~----el~~~ve~lv 116 (421)
....+++-.|.++ ...+|+..+.
T Consensus 122 e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 122 ECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 7777777778765 4566666543
No 45
>KOG4286|consensus
Probab=86.26 E-value=4 Score=44.92 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=84.2
Q ss_pred HHHHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcch-H-HHHHHHHHHhhhhhhcccchhhhhhccc
Q psy18090 60 NFYLKYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYGD-L-INYVQALLNSCLFIYQSRDDKELWSSLN 136 (421)
Q Consensus 60 ~~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~e-l-~~~ve~lv~sv~~~l~~~~~~~~w~~~~ 136 (421)
--+...||+. .++.|..-.|-+++..++++-.+||+..+|+++.-+++ . +.=++-++-...+++.+-.+.++
T Consensus 472 lN~llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~q~~l~lLL~dliqipr~lGE~aA----- 546 (966)
T KOG4286|consen 472 LNWLLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCDQRRLGLLLHDLIQIPRQLGEVAA----- 546 (966)
T ss_pred HHHHHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHHHHhHHHh-----
Confidence 3566778888 99999999999999999999999999999999988772 2 44445555556666555444444
Q ss_pred CCCCcccHHHHHHHHhc-cCCCCccCHHHHHHHHhhchhHHHHHHHHHHhh
Q psy18090 137 IDSDKGSLIVYANYLCM-GDCNNEITFDSLQKWLSTTHEIAYLHKYVLSHM 186 (421)
Q Consensus 137 ~~~~~~~v~~la~~l~~-k~~d~~is~~ef~~Wl~~~P~i~~~L~~~~~~~ 186 (421)
++++.-.+ =+.+-|. -.+...|+...|.+|+..-|+....|- |+|+.
T Consensus 547 fGgsNvep--svrsCF~~v~~~pei~~~~f~dw~~~epqsmVwL~-vlhRv 594 (966)
T KOG4286|consen 547 FGGSNIEP--SVRSCFQFVNNKPEIEAALFLDWMRLEPQSMVWLP-VLHRV 594 (966)
T ss_pred hcCCCCCh--HHHHHHHhcCCCCcchHHHHHHHhccCcchhhHHH-HHHHH
Confidence 33332222 2455555 334556999999999999888776554 44544
No 46
>KOG0377|consensus
Probab=86.02 E-value=0.69 Score=47.76 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=47.1
Q ss_pred cCCCCcccHHHHHHHH---HhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCH
Q psy18090 35 TNGKDVLTKVDVFELW---SMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNI 91 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~---~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~ 91 (421)
++.+|.||++||..+| .+|++-.+....+..+-+. +||.|++.||++++....|+..
T Consensus 558 ~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~~~ 621 (631)
T KOG0377|consen 558 ADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRRRS 621 (631)
T ss_pred cCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcchhh
Confidence 6788999999999999 4788877777777777666 9999999999999876666543
No 47
>KOG4666|consensus
Probab=85.48 E-value=1.5 Score=43.68 Aligned_cols=97 Identities=13% Similarity=0.039 Sum_probs=67.2
Q ss_pred HhhhcCC-CCCceeHhHHHHHHHHhhCC-CHHHHHHHHHHhhCCcch---HHHHHHHHHHhhhhhhcccchhhhhhcccC
Q psy18090 63 LKYYFPD-KTEKIDLSTFISLYYELDGS-NIDRKVEILLCFIGSYGD---LINYVQALLNSCLFIYQSRDDKELWSSLNI 137 (421)
Q Consensus 63 ~~~lF~~-~~~~I~~e~Fv~~ls~~~rG-t~eEk~~~i~~m~d~~~e---l~~~ve~lv~sv~~~l~~~~~~~~w~~~~~ 137 (421)
..-||+. .++.++|.+.|+.++++++- ...+.++.+|+|+++..+ =+.++.-|+..++++..
T Consensus 264 ~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~------------- 330 (412)
T KOG4666|consen 264 TFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEV------------- 330 (412)
T ss_pred hhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcce-------------
Confidence 3457777 89999999999999988854 456899999999999751 12444445555555422
Q ss_pred CCCcccHHHHHHHHhccCCCCccCHHHHHHHHhhchhHHH
Q psy18090 138 DSDKGSLIVYANYLCMGDCNNEITFDSLQKWLSTTHEIAY 177 (421)
Q Consensus 138 ~~~~~~v~~la~~l~~k~~d~~is~~ef~~Wl~~~P~i~~ 177 (421)
.++-.|-..+-++ .++.|+.++|.++..+.|.+..
T Consensus 331 ----l~v~~lf~~i~q~-d~~ki~~~~f~~fa~~~p~~a~ 365 (412)
T KOG4666|consen 331 ----LRVPVLFPSIEQK-DDPKIYASNFRKFAATEPNLAL 365 (412)
T ss_pred ----eeccccchhhhcc-cCcceeHHHHHHHHHhCchhhh
Confidence 1222233333223 3577999999999999999884
No 48
>KOG4223|consensus
Probab=85.03 E-value=5.2 Score=39.91 Aligned_cols=55 Identities=9% Similarity=0.098 Sum_probs=38.1
Q ss_pred hhh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC---CCCceeHhHHHHHHHHh
Q psy18090 32 KSL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD---KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 32 ~~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~---~~~~I~~e~Fv~~ls~~ 86 (421)
+++ +.+.|-|+..++..-+.+....-.-..-++++..- +++.|+++++...++..
T Consensus 84 ~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~ 142 (325)
T KOG4223|consen 84 PKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGR 142 (325)
T ss_pred hhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhc
Confidence 444 33338999999976666666655555555555544 89999999999887643
No 49
>KOG2643|consensus
Probab=82.68 E-value=1.1 Score=46.36 Aligned_cols=95 Identities=19% Similarity=0.166 Sum_probs=62.0
Q ss_pred CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----hHHHHHHH--HHHhhhhh-hcccchhhhhhcccCCCC-c
Q psy18090 70 KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----DLINYVQA--LLNSCLFI-YQSRDDKELWSSLNIDSD-K 141 (421)
Q Consensus 70 ~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----el~~~ve~--lv~sv~~~-l~~~~~~~~w~~~~~~~~-~ 141 (421)
.+|-|+|.+|+-.+ ++.-+++---.++|+|+|.++ +..+|... |+.+=-++ ..+++...+ .... .
T Consensus 212 ~~GLIsfSdYiFLl--TlLS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt-----~~s~~~ 284 (489)
T KOG2643|consen 212 ESGLISFSDYIFLL--TLLSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTT-----GNSFKV 284 (489)
T ss_pred CCCeeeHHHHHHHH--HHHccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccc-----cceehh
Confidence 68889999999775 677788888899999999988 34444322 22221111 223333211 1111 1
Q ss_pred ccHHHHHHHHhccCCCCccCHHHHHHHHhh
Q psy18090 142 GSLIVYANYLCMGDCNNEITFDSLQKWLST 171 (421)
Q Consensus 142 ~~v~~la~~l~~k~~d~~is~~ef~~Wl~~ 171 (421)
..-.+|..++|-+.+++.++.++|.++...
T Consensus 285 ~~nsaL~~yFFG~rg~~kLs~deF~~F~e~ 314 (489)
T KOG2643|consen 285 EVNSALLTYFFGKRGNGKLSIDEFLKFQEN 314 (489)
T ss_pred hhhhhHHHHhhccCCCccccHHHHHHHHHH
Confidence 234457788888999999999999888754
No 50
>KOG0028|consensus
Probab=82.66 E-value=35 Score=30.93 Aligned_cols=70 Identities=7% Similarity=0.044 Sum_probs=47.2
Q ss_pred cCCCCcccHHHHHHHHHhhccch-hHHHHHhhhcCC----CCCceeHhHHHHHHH-HhhCCCHHHHHHHHHHhhCCcc
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDS-LINFYLKYYFPD----KTEKIDLSTFISLYY-ELDGSNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~-l~~~~~~~lF~~----~~~~I~~e~Fv~~ls-~~~rGt~eEk~~~i~~m~d~~~ 106 (421)
.+++|.|..++|.-.. ...|.- .-+. +..|-.. ..+.|+|++|+.-+. .+..+...|-+.-+|++.|.+.
T Consensus 44 ~~~~g~iD~~EL~vAm-ralGFE~~k~e-i~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~ 119 (172)
T KOG0028|consen 44 PDMAGKIDVEELKVAM-RALGFEPKKEE-ILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDK 119 (172)
T ss_pred cCCCCcccHHHHHHHH-HHcCCCcchHH-HHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccC
Confidence 7888999999994332 222322 2233 2333333 578999999999976 4555557777888899999876
No 51
>KOG2643|consensus
Probab=80.80 E-value=25 Score=36.75 Aligned_cols=117 Identities=14% Similarity=0.225 Sum_probs=71.8
Q ss_pred cCCCCcccHHHHHHHHHh-------------------hccchhHHHHHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHH
Q psy18090 35 TNGKDVLTKVDVFELWSM-------------------EIKDSLINFYLKYYFPD-KTEKIDLSTFISLYYELDGSNIDRK 94 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~-------------------~~~~~l~~~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk 94 (421)
.+|.|.|+.|||....|. .+.......+..|+|+. .++++++++|..++-.+ .+|.
T Consensus 244 ~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~L----q~Ei 319 (489)
T KOG2643|consen 244 LDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENL----QEEI 319 (489)
T ss_pred cCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHH----HHHH
Confidence 578899999999887631 12224556678999999 89999999999998766 3566
Q ss_pred HHHHHHhhCCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhccCCCCccCHHHHHHHHh
Q psy18090 95 VEILLCFIGSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCMGDCNNEITFDSLQKWLS 170 (421)
Q Consensus 95 ~~~i~~m~d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~k~~d~~is~~ef~~Wl~ 170 (421)
+++=|.=++... -=.+|.+.|+.-... ++ ....-..+.+..=+ +..+..||++||..++.
T Consensus 320 l~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~--n~-------------~~k~~~lkrvk~kf-~~~~~gISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 320 LELEFERFDKGDSGAISEVDFAELLLAYAGV--NS-------------KKKHKYLKRVKEKF-KDDGKGISLQEFKAFFR 383 (489)
T ss_pred HHHHHHHhCcccccccCHHHHHHHHHHHccc--ch-------------HhHHHHHHHHHHhc-cCCCCCcCHHHHHHHHH
Confidence 666666666543 124555555431110 00 00111111222222 23367799999988885
Q ss_pred h
Q psy18090 171 T 171 (421)
Q Consensus 171 ~ 171 (421)
-
T Consensus 384 F 384 (489)
T KOG2643|consen 384 F 384 (489)
T ss_pred H
Confidence 3
No 52
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=79.32 E-value=2 Score=27.22 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=15.9
Q ss_pred hhhcCC-CCCceeHhHHHHHHHH
Q psy18090 64 KYYFPD-KTEKIDLSTFISLYYE 85 (421)
Q Consensus 64 ~~lF~~-~~~~I~~e~Fv~~ls~ 85 (421)
.+.|+. .+|.|++++|+..+..
T Consensus 6 F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 6 FREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHCCCCCCcCCHHHHHHHHHh
Confidence 345566 7888888888887653
No 53
>KOG0031|consensus
Probab=77.17 E-value=55 Score=29.55 Aligned_cols=69 Identities=10% Similarity=0.155 Sum_probs=54.6
Q ss_pred CCCcccHHHHHHHHHhhccchhHHHHHhhhcCCCCCceeHhHHHHHHHHhhCC-CHHHHHHHHHHhhCCcc
Q psy18090 37 GKDVLTKVDVFELWSMEIKDSLINFYLKYYFPDKTEKIDLSTFISLYYELDGS-NIDRKVEILLCFIGSYG 106 (421)
Q Consensus 37 ~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~~~~~I~~e~Fv~~ls~~~rG-t~eEk~~~i~~m~d~~~ 106 (421)
.-|-|.+++|..+|.+ ++...+++.+...+....+-|+|-.|+..+..-+.| ++|+-+.-+|+++|.++
T Consensus 45 rDG~IdkeDL~d~~aS-lGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~ 114 (171)
T KOG0031|consen 45 RDGFIDKEDLRDMLAS-LGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEG 114 (171)
T ss_pred CCCcccHHHHHHHHHH-cCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccC
Confidence 3389999999888754 444466676777776678899999999999866655 57888899999999985
No 54
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=76.11 E-value=9.7 Score=26.38 Aligned_cols=48 Identities=10% Similarity=0.231 Sum_probs=37.3
Q ss_pred hcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----hHHHHHH
Q psy18090 66 YFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----DLINYVQ 113 (421)
Q Consensus 66 lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----el~~~ve 113 (421)
.|+. .++.|++++|...+..+.....++.+.-++..++.++ .+.+|+.
T Consensus 8 ~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 8 LFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 3444 6889999999999988878888888888999988765 4555543
No 55
>KOG0037|consensus
Probab=74.15 E-value=54 Score=31.15 Aligned_cols=125 Identities=10% Similarity=0.062 Sum_probs=79.0
Q ss_pred chHHH----hhh-cCCCCcccHHHHHHHHH----hhccchhHHHHHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHH
Q psy18090 27 DVKKI----KSL-TNGKDVLTKVDVFELWS----MEIKDSLINFYLKYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVE 96 (421)
Q Consensus 27 ~~~~~----~~~-~~~~g~is~e~~~~~~~----~~~~~~l~~~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~ 96 (421)
..++| .++ .+.+|.|+.++|+..-+ ++|-.... -+.-.+|+. .+++|.|+||......+ .+=.
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~Tc-rlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr 127 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETC-RLMISMFDRDNSGTIGFKEFKALWKYI------NQWR 127 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHH-HHHHHHhcCCCCCccCHHHHHHHHHHH------HHHH
Confidence 55566 333 46669999999976522 33444333 344567777 89999999999886443 3446
Q ss_pred HHHHhhCCcc----hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhccCCCCccCHHHHHHHHhhc
Q psy18090 97 ILLCFIGSYG----DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCMGDCNNEITFDSLQKWLSTT 172 (421)
Q Consensus 97 ~i~~m~d~~~----el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~k~~d~~is~~ef~~Wl~~~ 172 (421)
-+|+-||.|. +-.++-.|+-. + +.+-+++..+.++.+.-.. ..+.|.+++|+..|...
T Consensus 128 ~vF~~~D~D~SG~I~~sEL~~Al~~-~----------------Gy~Lspq~~~~lv~kyd~~-~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 128 NVFRTYDRDRSGTIDSSELRQALTQ-L----------------GYRLSPQFYNLLVRKYDRF-GGGRIDFDDFIQCCVVL 189 (221)
T ss_pred HHHHhcccCCCCcccHHHHHHHHHH-c----------------CcCCCHHHHHHHHHHhccc-cCCceeHHHHHHHHHHH
Confidence 6888899887 44554455432 2 2334466666666665432 25679999999888754
Q ss_pred hhHH
Q psy18090 173 HEIA 176 (421)
Q Consensus 173 P~i~ 176 (421)
+.+.
T Consensus 190 ~~lt 193 (221)
T KOG0037|consen 190 QRLT 193 (221)
T ss_pred HHHH
Confidence 4433
No 56
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=71.40 E-value=5.5 Score=34.01 Aligned_cols=54 Identities=17% Similarity=0.221 Sum_probs=36.6
Q ss_pred ccchHHH----hhh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHH
Q psy18090 25 PEDVKKI----KSL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLY 83 (421)
Q Consensus 25 ~~~~~~~----~~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~l 83 (421)
|+...+| ..+ .++.|.|+.+||..+. -...+..+..+|.. +++.||++||...+
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIR-----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4455555 445 4555999999997654 12235555655555 89999999998886
No 57
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=70.01 E-value=12 Score=31.86 Aligned_cols=53 Identities=11% Similarity=0.002 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhhCCcc-------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCcc
Q psy18090 91 IDRKVEILLCFIGSYG-------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEI 160 (421)
Q Consensus 91 ~eEk~~~i~~m~d~~~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~i 160 (421)
..+++.|+|..+|.++ |+..+. + . ..+..++.++. .+.|+.|
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-------~------------------~~e~~~~~f~~~~D~n~Dg~I 97 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-------D------------------PNEHCIKPFFESCDLDKDGSI 97 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-------c------------------chHHHHHHHHHHHCCCCCCCC
Confidence 3478899999999987 566543 0 0 11334455554 7789999
Q ss_pred CHHHHHHHHhh
Q psy18090 161 TFDSLQKWLST 171 (421)
Q Consensus 161 s~~ef~~Wl~~ 171 (421)
|++||...+.+
T Consensus 98 S~~Ef~~cl~~ 108 (116)
T cd00252 98 SLDEWCYCFIK 108 (116)
T ss_pred CHHHHHHHHhC
Confidence 99999988843
No 58
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=67.67 E-value=13 Score=34.63 Aligned_cols=104 Identities=12% Similarity=-0.036 Sum_probs=73.1
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcchHHHHHH
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYGDLINYVQ 113 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~el~~~ve 113 (421)
++=-|+||++++- .++.+.+...=++.||.+ -+++||+.+.+--|....--+-+|.+++++.=+.+++-+++|++
T Consensus 8 sDFDGTITl~Ds~----~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk~i~Idp~fKef~e 83 (220)
T COG4359 8 SDFDGTITLNDSN----DYITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLKDIKIDPGFKEFVE 83 (220)
T ss_pred ecCCCceEecchh----HHHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHhhcccCccHHHHHH
Confidence 3445899999995 444433333334477777 89999999999888888888889999999998888887777777
Q ss_pred HHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc
Q psy18090 114 ALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM 153 (421)
Q Consensus 114 ~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~ 153 (421)
=+=..=+..... ..+.+..+..|.+++..
T Consensus 84 ~ike~di~fiVv-----------SsGm~~fI~~lfe~ivg 112 (220)
T COG4359 84 WIKEHDIPFIVV-----------SSGMDPFIYPLFEGIVG 112 (220)
T ss_pred HHHHcCCCEEEE-----------eCCCchHHHHHHHhhcc
Confidence 665443333222 33445577777777764
No 59
>KOG0030|consensus
Probab=67.48 E-value=82 Score=27.98 Aligned_cols=123 Identities=15% Similarity=0.291 Sum_probs=0.0
Q ss_pred cCCccchHHHhhh-----cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC--CC----CceeHhHHHHHHHHhh---
Q psy18090 22 KIKPEDVKKIKSL-----TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD--KT----EKIDLSTFISLYYELD--- 87 (421)
Q Consensus 22 ~~~~~~~~~~~~~-----~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~--~~----~~I~~e~Fv~~ls~~~--- 87 (421)
| .|+..++.+.+ ..|-++|+..+.-.. -..++..=.++++..+-+- ++ +.|+||+|+--|..+.
T Consensus 5 ~-~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdv-lRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 5 F-TPDQMEEFKEAFLLFDRTGDGKISGSQVGDV-LRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred c-CcchHHHHHHHHHHHhccCcccccHHHHHHH-HHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc
Q ss_pred -CCCHHHHHHHHHHhhCCcc-------hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc--cCCC
Q psy18090 88 -GSNIDRKVEILLCFIGSYG-------DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM--GDCN 157 (421)
Q Consensus 88 -rGt~eEk~~~i~~m~d~~~-------el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~--k~~d 157 (421)
.||.|+=.+- ++.+|-.+ |+..++..+ ..++.+.+ |++|+. .+.+
T Consensus 83 ~q~t~edfveg-LrvFDkeg~G~i~~aeLRhvLttl------------------Gekl~eeE------Ve~Llag~eD~n 137 (152)
T KOG0030|consen 83 DQGTYEDFVEG-LRVFDKEGNGTIMGAELRHVLTTL------------------GEKLTEEE------VEELLAGQEDSN 137 (152)
T ss_pred ccCcHHHHHHH-HHhhcccCCcceeHHHHHHHHHHH------------------HhhccHHH------HHHHHccccccC
Q ss_pred CccCHHHHHHHHhh
Q psy18090 158 NEITFDSLQKWLST 171 (421)
Q Consensus 158 ~~is~~ef~~Wl~~ 171 (421)
+.|.++.|.+-+..
T Consensus 138 G~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 138 GCINYEAFVKHIMS 151 (152)
T ss_pred CcCcHHHHHHHHhc
No 60
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=67.29 E-value=19 Score=29.03 Aligned_cols=51 Identities=4% Similarity=-0.044 Sum_probs=39.4
Q ss_pred hhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----hHHHHHHHHH
Q psy18090 64 KYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----DLINYVQALL 116 (421)
Q Consensus 64 ~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----el~~~ve~lv 116 (421)
...|+. .++.|+++++...+.. .|-.++.+..++..++.+. .+.+|+..+.
T Consensus 16 F~~~D~d~~G~Is~~el~~~l~~--~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 16 FRSLDKNQDGTVTGAQAKPILLK--SGLPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred HHHhCCCCCCeEeHHHHHHHHHH--cCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 345555 8999999999999865 5777888899999998865 5777776544
No 61
>KOG0751|consensus
Probab=65.02 E-value=18 Score=38.25 Aligned_cols=85 Identities=21% Similarity=0.281 Sum_probs=64.3
Q ss_pred ccccCCccchHHH----hhh-cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC-----CCCceeHhHHHHHHHHhhC
Q psy18090 19 LSRKIKPEDVKKI----KSL-TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD-----KTEKIDLSTFISLYYELDG 88 (421)
Q Consensus 19 ~~~~~~~~~~~~~----~~~-~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~-----~~~~I~~e~Fv~~ls~~~r 88 (421)
+-|. .|+|.+.| ..+ ..|+--.+.|+|...|--.+.+.....-+.+|-.. +|+-|+|++|.-+-+.++
T Consensus 27 lkra-~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC- 104 (694)
T KOG0751|consen 27 LKRA-DPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLC- 104 (694)
T ss_pred hccC-ChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhcc-
Confidence 5566 88999988 222 34445689999998886666666555556666555 899999999999876555
Q ss_pred CCHHHHHHHHHHhhCCcc
Q psy18090 89 SNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 89 Gt~eEk~~~i~~m~d~~~ 106 (421)
.+|-+.+.+|+++|..+
T Consensus 105 -~pDal~~~aFqlFDr~~ 121 (694)
T KOG0751|consen 105 -APDALFEVAFQLFDRLG 121 (694)
T ss_pred -CchHHHHHHHHHhcccC
Confidence 56889999999999876
No 62
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=64.44 E-value=29 Score=25.16 Aligned_cols=49 Identities=6% Similarity=-0.094 Sum_probs=36.6
Q ss_pred hcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc----hHHHHHHHHH
Q psy18090 66 YFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG----DLINYVQALL 116 (421)
Q Consensus 66 lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~----el~~~ve~lv 116 (421)
.|+. +++.|+.+++...+..+ |-.++.+.-+++.++.++ ...+|+..+.
T Consensus 7 ~~D~~~~G~i~~~el~~~l~~~--g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~ 60 (67)
T cd00052 7 SLDPDGDGLISGDEARPFLGKS--GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMH 60 (67)
T ss_pred HhCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence 3455 78999999999987543 666777888888888765 5677766654
No 63
>KOG0037|consensus
Probab=63.56 E-value=1.2e+02 Score=28.94 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=58.9
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCc--c--
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSY--G-- 106 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~--~-- 106 (421)
++.+|+|.-+||+++|+.. .+ -+.+|.. .+++|+..|+-.++..+---=+++-.++|++=||.. +
T Consensus 105 ~~~~G~i~f~EF~~Lw~~i-~~------Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i 177 (221)
T KOG0037|consen 105 RDNSGTIGFKEFKALWKYI-NQ------WRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRI 177 (221)
T ss_pred CCCCCccCHHHHHHHHHHH-HH------HHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCce
Confidence 5556899999999999642 11 2334444 899999999999998888888999999999999965 2
Q ss_pred hHHHHHHHHH
Q psy18090 107 DLINYVQALL 116 (421)
Q Consensus 107 el~~~ve~lv 116 (421)
.+-+|++.++
T Consensus 178 ~FD~FI~ccv 187 (221)
T KOG0037|consen 178 DFDDFIQCCV 187 (221)
T ss_pred eHHHHHHHHH
Confidence 5778888776
No 64
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=59.50 E-value=12 Score=32.91 Aligned_cols=31 Identities=6% Similarity=-0.062 Sum_probs=25.1
Q ss_pred CcccHHHHHHHHHhhccchhHHHHHhhhcCC
Q psy18090 39 DVLTKVDVFELWSMEIKDSLINFYLKYYFPD 69 (421)
Q Consensus 39 g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~ 69 (421)
+.|+-|-|+.+.+.|++-.+|+.+++|||..
T Consensus 47 ~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~s 77 (138)
T PF14513_consen 47 EPIDYEGFKLFMKTYLEVDLPEDLCQHLFLS 77 (138)
T ss_dssp TEE-HHHHHHHHHHHTT-S--HHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4899999999999999988999999999987
No 65
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=48.30 E-value=26 Score=25.55 Aligned_cols=44 Identities=16% Similarity=0.295 Sum_probs=27.4
Q ss_pred cHHHHHHHHHhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHh
Q psy18090 42 TKVDVFELWSMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 42 s~e~~~~~~~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~ 86 (421)
+.++++++-+ -+.-.+.+.++..||.. .++.++.++|+.++-.+
T Consensus 3 sf~Evk~lLk-~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 3 SFKEVKKLLK-MMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EHHHHHHHHH-HTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 4444433322 23333667788888877 78899999999997654
No 66
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=44.54 E-value=96 Score=24.80 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=37.1
Q ss_pred HhhhcCC--CCC-ceeHhHHHHHHHH-----hhCCCHHHHHHHHHHhhCCcc----hHHHHHHHHHH
Q psy18090 63 LKYYFPD--KTE-KIDLSTFISLYYE-----LDGSNIDRKVEILLCFIGSYG----DLINYVQALLN 117 (421)
Q Consensus 63 ~~~lF~~--~~~-~I~~e~Fv~~ls~-----~~rGt~eEk~~~i~~m~d~~~----el~~~ve~lv~ 117 (421)
+.++|+. +++ .|+.++|...+.. +-.-..++.+.-+++-+|.++ +..+|+..+..
T Consensus 13 aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 13 VFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4566753 688 5999999999876 332233344666676778877 67777765554
No 67
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=43.89 E-value=39 Score=26.35 Aligned_cols=52 Identities=13% Similarity=0.207 Sum_probs=30.5
Q ss_pred hhhcCCCCcccHHHHHHHHHhhccc-hhHHHHHhhhcCC--------CCCceeHhHHHHHH
Q psy18090 32 KSLTNGKDVLTKVDVFELWSMEIKD-SLINFYLKYYFPD--------KTEKIDLSTFISLY 83 (421)
Q Consensus 32 ~~~~~~~g~is~e~~~~~~~~~~~~-~l~~~~~~~lF~~--------~~~~I~~e~Fv~~l 83 (421)
+..+++.+.+|+++|.++-...=++ .+...-+..++.. ..+.++++.|+.+|
T Consensus 7 ~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 7 RKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHH
T ss_pred HHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHH
Confidence 5566666788888887666322222 1223334444333 46778888888776
No 68
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=41.99 E-value=1.1e+02 Score=24.52 Aligned_cols=24 Identities=4% Similarity=0.216 Sum_probs=18.3
Q ss_pred HHHHhc---cCCCCccCHHHHHHHHhh
Q psy18090 148 ANYLCM---GDCNNEITFDSLQKWLST 171 (421)
Q Consensus 148 a~~l~~---k~~d~~is~~ef~~Wl~~ 171 (421)
++.++. ++.|+.|+++||..++..
T Consensus 54 ~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 54 LDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 444444 678999999999988864
No 69
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=39.41 E-value=39 Score=35.04 Aligned_cols=24 Identities=4% Similarity=0.012 Sum_probs=16.2
Q ss_pred CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCCcc
Q psy18090 70 KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 70 ~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~~~ 106 (421)
+++.|++++|+. .+.+|..+|.++
T Consensus 347 gdG~Is~~E~~~-------------~~~~F~~~D~d~ 370 (391)
T PRK12309 347 GDGFITREEWLG-------------SDAVFDALDLNH 370 (391)
T ss_pred CCCcCcHHHHHH-------------HHHHHHHhCCCC
Confidence 777788777741 456677777665
No 70
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=39.19 E-value=1e+02 Score=24.11 Aligned_cols=49 Identities=6% Similarity=0.021 Sum_probs=33.4
Q ss_pred CCCceeHhHHHHHHHHhhC-----CCHHHHHHHHHHhhCCcc----hHHHHHHHHHHh
Q psy18090 70 KTEKIDLSTFISLYYELDG-----SNIDRKVEILLCFIGSYG----DLINYVQALLNS 118 (421)
Q Consensus 70 ~~~~I~~e~Fv~~ls~~~r-----Gt~eEk~~~i~~m~d~~~----el~~~ve~lv~s 118 (421)
+++.|+.++|...+..... +..++.+.-++..++.++ ...+|+..+...
T Consensus 23 ~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 23 DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 6789999999998754221 123677888888888875 566666554443
No 71
>KOG4251|consensus
Probab=38.26 E-value=1.4e+02 Score=28.98 Aligned_cols=76 Identities=5% Similarity=0.082 Sum_probs=43.6
Q ss_pred CcccHHHHHHHH----HhhccchhHHHHHhhhcCC----CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCC---cch
Q psy18090 39 DVLTKVDVFELW----SMEIKDSLINFYLKYYFPD----KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGS---YGD 107 (421)
Q Consensus 39 g~is~e~~~~~~----~~~~~~~l~~~~~~~lF~~----~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~---~~e 107 (421)
+.||..+++.-. ..||..+..++ +-.|+. +||.|+.++|-..+ ...+|..+--.-....+=+. +.|
T Consensus 116 rkisAkEmqrwImektaEHfqeameeS--kthFraVDpdgDGhvsWdEykvkF-laskghsekevadairlneelkVDeE 192 (362)
T KOG4251|consen 116 RKISAKEMQRWIMEKTAEHFQEAMEES--KTHFRAVDPDGDGHVSWDEYKVKF-LASKGHSEKEVADAIRLNEELKVDEE 192 (362)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhhh--hhheeeeCCCCCCceehhhhhhHH-HhhcCcchHHHHHHhhccCcccccHH
Confidence 688888884211 12344443333 223444 89999999998774 45677666555444444322 225
Q ss_pred HHHHHHHHHH
Q psy18090 108 LINYVQALLN 117 (421)
Q Consensus 108 l~~~ve~lv~ 117 (421)
-+.|.+.+..
T Consensus 193 tqevlenlkd 202 (362)
T KOG4251|consen 193 TQEVLENLKD 202 (362)
T ss_pred HHHHHHhhhh
Confidence 5666666554
No 72
>KOG0046|consensus
Probab=38.12 E-value=55 Score=35.04 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=42.9
Q ss_pred ccccccCCccchHHH----hhhcCCCCcccHHHHHHHHHh-hccc-----hhHHHHHhhhcCCCCCceeHhHHHHHH
Q psy18090 17 KNLSRKIKPEDVKKI----KSLTNGKDVLTKVDVFELWSM-EIKD-----SLINFYLKYYFPDKTEKIDLSTFISLY 83 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~----~~~~~~~g~is~e~~~~~~~~-~~~~-----~l~~~~~~~lF~~~~~~I~~e~Fv~~l 83 (421)
+.-+.+ .-+|.+++ .++.+++|.|+..++...+.. -++. --...+...+....++.|+||+|+..+
T Consensus 8 ~~~~~~-tq~El~~l~~kF~~~d~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 8 WLQSQL-TQEELRELKEKFNKLDDQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIF 83 (627)
T ss_pred hhcccc-cHHHHHHHHHHHHhhcCCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHH
Confidence 334556 77888888 445677899999999877742 2222 122233333333389999999999854
No 73
>PF14658 EF-hand_9: EF-hand domain
Probab=37.98 E-value=1.3e+02 Score=23.15 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=36.1
Q ss_pred HhhhcCC-CCCceeHhHHHHHHHHhhC-CCHHHHHHHHHHhhCCcc
Q psy18090 63 LKYYFPD-KTEKIDLSTFISLYYELDG-SNIDRKVEILLCFIGSYG 106 (421)
Q Consensus 63 ~~~lF~~-~~~~I~~e~Fv~~ls~~~r-Gt~eEk~~~i~~m~d~~~ 106 (421)
+..+|+. +.|.|.-.+++..|-.+.- +-.|+.++=+.+++|+++
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g 48 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEG 48 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCC
Confidence 3567777 8899999888888776654 888899999999999987
No 74
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=37.49 E-value=39 Score=21.12 Aligned_cols=20 Identities=15% Similarity=0.198 Sum_probs=12.5
Q ss_pred hhcCC-CCCceeHhHHHHHHH
Q psy18090 65 YYFPD-KTEKIDLSTFISLYY 84 (421)
Q Consensus 65 ~lF~~-~~~~I~~e~Fv~~ls 84 (421)
+.|+. .++.|++++|...+.
T Consensus 7 ~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 7 KMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHCCCCCCcCcHHHHHHHHH
Confidence 34444 677777777777664
No 75
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=35.74 E-value=1.5e+02 Score=23.46 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=37.0
Q ss_pred HhhhcC-C-CCC-ceeHhHHHHHHHH-hh----CCCHHHHHHHHHHhhCCcc----hHHHHHHHHHH
Q psy18090 63 LKYYFP-D-KTE-KIDLSTFISLYYE-LD----GSNIDRKVEILLCFIGSYG----DLINYVQALLN 117 (421)
Q Consensus 63 ~~~lF~-~-~~~-~I~~e~Fv~~ls~-~~----rGt~eEk~~~i~~m~d~~~----el~~~ve~lv~ 117 (421)
+..+|+ . .++ .|+.++|...+.. +- ....++.++-+++.+|.++ ...+|+..+..
T Consensus 14 ~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 14 VFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 455665 4 788 5999999999853 21 1224566777888888876 56777665443
No 76
>KOG0468|consensus
Probab=35.56 E-value=64 Score=35.79 Aligned_cols=87 Identities=14% Similarity=0.172 Sum_probs=59.3
Q ss_pred cccccccCCccchHHHhhh------cCCC-C-cccHHHHHHHHHhhccchhHHHHHhhhcCC--------------CCCc
Q psy18090 16 KKNLSRKIKPEDVKKIKSL------TNGK-D-VLTKVDVFELWSMEIKDSLINFYLKYYFPD--------------KTEK 73 (421)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~------~~~~-g-~is~e~~~~~~~~~~~~~l~~~~~~~lF~~--------------~~~~ 73 (421)
++.+|.| ..++++.++-+ +++. | .+|+..|.++|....+...-..|+.||.+. +++.
T Consensus 285 N~~is~~-s~~~~~~~sP~~gNvcFaS~~~g~cFtl~sFak~Y~~~~~~~~~d~Fa~RLWGdvYf~~ktrkF~kk~~~~~ 363 (971)
T KOG0468|consen 285 NNLISTF-SKDDNPVVSPILGNVCFASGKLGFCFTLKSFAKLYADAHGHIDVDDFAKRLWGDVYFHSKTRKFVKKPPDGS 363 (971)
T ss_pred cchhhhc-ccccccccccccCceeeeccccceeeehHHHHHHHHHhcCCcchhhhhhhhhccccccccccccccCCCCCc
Confidence 3456667 66677766333 2233 4 799999999998777778999999999866 4555
Q ss_pred eeHhHHHHHH-------HHhhCCCHHHHHHHHHHhhCC
Q psy18090 74 IDLSTFISLY-------YELDGSNIDRKVEILLCFIGS 104 (421)
Q Consensus 74 I~~e~Fv~~l-------s~~~rGt~eEk~~~i~~m~d~ 104 (421)
..+ .||+|+ ....-|..+++++-.+.-+.+
T Consensus 364 ~~r-sFVeFILePlYKi~sq~igd~~~~l~~~l~e~~v 400 (971)
T KOG0468|consen 364 GSR-SFVEFILEPLYKIFSQVIGDEKDSLKGLLAELGV 400 (971)
T ss_pred ccc-hhhhhhHhHHHHHHHHHhcchhhhhhhhhhhhcc
Confidence 555 676663 234568888888766644444
No 77
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=34.72 E-value=1.7e+02 Score=23.52 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=37.8
Q ss_pred HhhhcCC--CCC-ceeHhHHHHHHHHhh----CCC-HHHHHHHHHHhhCCcc----hHHHHHHHHHHhhh
Q psy18090 63 LKYYFPD--KTE-KIDLSTFISLYYELD----GSN-IDRKVEILLCFIGSYG----DLINYVQALLNSCL 120 (421)
Q Consensus 63 ~~~lF~~--~~~-~I~~e~Fv~~ls~~~----rGt-~eEk~~~i~~m~d~~~----el~~~ve~lv~sv~ 120 (421)
+.+.|+. .++ +|+.++|...+.... .+. .++.++-+++-+|.++ +..+|+..+..-.+
T Consensus 15 ~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 15 IFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 3556765 566 599999999986532 222 4456677777778876 56777766554333
No 78
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=32.33 E-value=1.7e+02 Score=23.27 Aligned_cols=57 Identities=5% Similarity=0.054 Sum_probs=38.1
Q ss_pred hhhcCC--C-CCceeHhHHHHHHHHh-----hCCCHHHHHHHHHHhhCCcc----hHHHHHHHHHHhhh
Q psy18090 64 KYYFPD--K-TEKIDLSTFISLYYEL-----DGSNIDRKVEILLCFIGSYG----DLINYVQALLNSCL 120 (421)
Q Consensus 64 ~~lF~~--~-~~~I~~e~Fv~~ls~~-----~rGt~eEk~~~i~~m~d~~~----el~~~ve~lv~sv~ 120 (421)
..+|+. + ++.|+.+++...+... ...-.++.+.-+++.+|.++ ...+|+..+...-+
T Consensus 14 F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 14 FHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 445654 3 5899999999987542 22335566777888888876 67788766554333
No 79
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=30.27 E-value=1.8e+02 Score=23.42 Aligned_cols=57 Identities=11% Similarity=-0.004 Sum_probs=38.2
Q ss_pred HhhhcCC--CCCceeHhHHHHHHHHhhCCCH--H-HHHHHHHHhhCCcc----hHHHHHHHHHHhhh
Q psy18090 63 LKYYFPD--KTEKIDLSTFISLYYELDGSNI--D-RKVEILLCFIGSYG----DLINYVQALLNSCL 120 (421)
Q Consensus 63 ~~~lF~~--~~~~I~~e~Fv~~ls~~~rGt~--e-Ek~~~i~~m~d~~~----el~~~ve~lv~sv~ 120 (421)
+.++|+. .+++|+..+|...+..- -|.. + +-+.-+++-+|.++ ...+|+..|-+-.+
T Consensus 13 ~F~~fd~~~~~g~i~~~ELk~ll~~e-lg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 13 NFHKASVKGGKESLTASEFQELLTQQ-LPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred HHHHHhCCCCCCeECHHHHHHHHHHH-hhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 4456665 68899999999987651 2321 2 55777788889887 56777665554333
No 80
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=29.28 E-value=1.9e+02 Score=22.92 Aligned_cols=52 Identities=4% Similarity=0.074 Sum_probs=36.7
Q ss_pred CCCceeHhHHHHHHHHhh-----CCCHHHHHHHHHHhhCCcc----hHHHHHHHHHHhhhh
Q psy18090 70 KTEKIDLSTFISLYYELD-----GSNIDRKVEILLCFIGSYG----DLINYVQALLNSCLF 121 (421)
Q Consensus 70 ~~~~I~~e~Fv~~ls~~~-----rGt~eEk~~~i~~m~d~~~----el~~~ve~lv~sv~~ 121 (421)
+++.|+.++|...+.... .+..++.+.-+|+-+|.++ ...+|+..+......
T Consensus 23 ~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~~ 83 (88)
T cd05030 23 HPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGVA 83 (88)
T ss_pred CcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHHH
Confidence 467899999999985321 3344788888999989876 577777665544443
No 81
>PLN02964 phosphatidylserine decarboxylase
Probab=28.46 E-value=65 Score=35.64 Aligned_cols=51 Identities=6% Similarity=-0.064 Sum_probs=36.3
Q ss_pred cCCCCcccHHHHHHHHHhhccchhHHHHHh---hhcCC-CCCceeHhHHHHHHHHh
Q psy18090 35 TNGKDVLTKVDVFELWSMEIKDSLINFYLK---YYFPD-KTEKIDLSTFISLYYEL 86 (421)
Q Consensus 35 ~~~~g~is~e~~~~~~~~~~~~~l~~~~~~---~lF~~-~~~~I~~e~Fv~~ls~~ 86 (421)
.++.|.|+.++|..+... ++...++.-+. ++|+. +++.|++++|...+...
T Consensus 190 ~DgdG~IdfdEFl~lL~~-lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 190 YDEDGQLSFSEFSDLIKA-FGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred CCCCCeEcHHHHHHHHHH-hccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 355699999999988764 34444444344 45555 89999999999987664
No 82
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=28.13 E-value=55 Score=19.77 Aligned_cols=15 Identities=27% Similarity=0.612 Sum_probs=13.1
Q ss_pred cCCCCccCHHHHHHH
Q psy18090 154 GDCNNEITFDSLQKW 168 (421)
Q Consensus 154 k~~d~~is~~ef~~W 168 (421)
++.||.|+.+||...
T Consensus 10 ~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 10 TDGDGKISFEEFQRL 24 (25)
T ss_dssp TTSSSEEEHHHHHHH
T ss_pred CCCCCcCCHHHHHHH
Confidence 889999999998764
No 83
>KOG0798|consensus
Probab=27.85 E-value=1.2e+02 Score=31.02 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=53.6
Q ss_pred CCCcccHHHHHHHHHhhccchhHHHHHhhhcCC-CCCceeHhHHHHHHH-HhhCCCHHHHHHHHHHhhCCcc--hHHHHH
Q psy18090 37 GKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD-KTEKIDLSTFISLYY-ELDGSNIDRKVEILLCFIGSYG--DLINYV 112 (421)
Q Consensus 37 ~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~-~~~~I~~e~Fv~~ls-~~~rGt~eEk~~~i~~m~d~~~--el~~~v 112 (421)
|.-++++++|++.|++-+|.+++..+ ..|=+- =.....+++-|.-++ ..+=-|+.|+...+|.+=..=. +++-++
T Consensus 272 ~~~~~~l~eF~e~W~~~lP~gm~~~~-~~L~gl~l~~k~~~~~~i~~la~~~LP~~pkeRf~~LF~~r~~W~~edl~Pyi 350 (380)
T KOG0798|consen 272 GIVSFSLDEFMELWKKRLPYGMPCDI-KQLEGLGLLDKGPFSKLILYLAVEDLPTTPKERFSVLFELRSRWTMEDLEPYI 350 (380)
T ss_pred HHhcccHHHHHHHHHHhCCCCCCcCh-hhcccccccccCCcchhhhhhhHhhcCCCHHHHHHHHHHHHhhhhHHHhhHHH
Confidence 33467799999999999999877652 222221 122345556666666 5678889999999997744322 678888
Q ss_pred HHHHH
Q psy18090 113 QALLN 117 (421)
Q Consensus 113 e~lv~ 117 (421)
+++.+
T Consensus 351 ~~l~~ 355 (380)
T KOG0798|consen 351 EDLSR 355 (380)
T ss_pred HHHhh
Confidence 88765
No 84
>KOG1761|consensus
Probab=26.46 E-value=40 Score=28.67 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=24.2
Q ss_pred cCCccchHHHhhhcCCCC----cccHHHHHHHHHhh
Q psy18090 22 KIKPEDVKKIKSLTNGKD----VLTKVDVFELWSME 53 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~g----~is~e~~~~~~~~~ 53 (421)
| .|+|.++|=|+++|+. .+..+++-++|++|
T Consensus 50 ~-e~~e~~cLiRa~~G~kKiSTVV~akev~~F~~~Y 84 (116)
T KOG1761|consen 50 F-EPSEYRCLIRATDGKKKISTVVKAKEVNKFQQSY 84 (116)
T ss_pred C-CCccceEEEEeccCCceEEEEEeHHHHHHHHHHH
Confidence 5 8999999977878884 57788887776655
No 85
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=25.19 E-value=2.6e+02 Score=22.38 Aligned_cols=43 Identities=12% Similarity=0.171 Sum_probs=29.6
Q ss_pred HHhhhcCC-CCCceeHhHHHHHHHHhhCCCHHHHHHHHHHhhCC
Q psy18090 62 YLKYYFPD-KTEKIDLSTFISLYYELDGSNIDRKVEILLCFIGS 104 (421)
Q Consensus 62 ~~~~lF~~-~~~~I~~e~Fv~~ls~~~rGt~eEk~~~i~~m~d~ 104 (421)
-+..+|.. .....++.+|+..+....+.++++|..++-.|+.+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~l~~l~~v 83 (106)
T cd07316 40 EAIRLFNEGKESDFGLEEYARQFRRACGGRPELLLQLLEFLFQI 83 (106)
T ss_pred HHHHHHHHhCcCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 34455544 34447889999998887889999988766555443
No 86
>PF07765 KIP1: KIP1-like protein; InterPro: IPR011684 This is a group of sequences found exclusively in plants. They are similar to kinase interacting protein 1 (KIP1), which has been found to interact with the kinase domain of PRK1, a receptor-like kinase []. This particular region contains two coiled-coils, which are described as motifs involved in protein-protein interactions []. It has also been suggested that the coiled-coils of the protein allow it to dimerise in vivo [].
Probab=22.53 E-value=1.7e+02 Score=23.03 Aligned_cols=33 Identities=30% Similarity=0.491 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHhhCCcc---------------hHHHHHHHHHHhhhhh
Q psy18090 90 NIDRKVEILLCFIGSYG---------------DLINYVQALLNSCLFI 122 (421)
Q Consensus 90 t~eEk~~~i~~m~d~~~---------------el~~~ve~lv~sv~~~ 122 (421)
..|+|.+.++++++-++ ++..+|++++.+|-.+
T Consensus 22 dmd~kvk~mlklieedgdSfakrAEmyy~kRp~Li~~vee~yr~YrsL 69 (74)
T PF07765_consen 22 DMDEKVKAMLKLIEEDGDSFAKRAEMYYKKRPELISLVEEFYRSYRSL 69 (74)
T ss_pred HHHHHHHHHHHHhccCcchHHHhhHHHhcccHHHHHHHHHHHHHHHHH
Confidence 34666666666666544 7899999999887654
No 87
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=22.04 E-value=4.4e+02 Score=21.49 Aligned_cols=46 Identities=13% Similarity=0.154 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHhhhhhhcccchhhhhhcccCCCCcccHHHHHHHHhc---cCCCCccCHHHHHHHHhh
Q psy18090 107 DLINYVQALLNSCLFIYQSRDDKELWSSLNIDSDKGSLIVYANYLCM---GDCNNEITFDSLQKWLST 171 (421)
Q Consensus 107 el~~~ve~lv~sv~~~l~~~~~~~~w~~~~~~~~~~~v~~la~~l~~---k~~d~~is~~ef~~Wl~~ 171 (421)
|+++.++.=+..++.. ..++. -++.+|+ ++.|+.++++||...+..
T Consensus 28 Elk~Ll~~Elp~~l~~---------------~~d~~----~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 28 DLQKLMEKEFSEFLKN---------------QNDPM----AVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHhHHHHcC---------------CCCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 7888887766655532 11222 4566655 778999999999877653
No 88
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=21.23 E-value=1.4e+02 Score=23.07 Aligned_cols=47 Identities=17% Similarity=0.249 Sum_probs=31.4
Q ss_pred hhhcCCCCcccHHHHHHHHHhhccchhHHHHHhhhcCC--CC-----CceeHhHHHHH
Q psy18090 32 KSLTNGKDVLTKVDVFELWSMEIKDSLINFYLKYYFPD--KT-----EKIDLSTFISL 82 (421)
Q Consensus 32 ~~~~~~~g~is~e~~~~~~~~~~~~~l~~~~~~~lF~~--~~-----~~I~~e~Fv~~ 82 (421)
+.|.+|+.-||.++|. +...++ .+++.+.+.=.- +. +..+|+.|+..
T Consensus 13 r~lA~~KpyVT~~dLr---~~l~pe-~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 13 RALAGGKPYVTEEDLR---RSLTPE-QAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp HHHCTSSSCEEHHHHH---HHS-CC-CHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred HHHHcCCCcccHHHHH---HHcCcH-HHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 7788899999999995 444444 446655544222 33 77999998864
No 89
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=20.71 E-value=1.2e+02 Score=16.80 Aligned_cols=18 Identities=22% Similarity=0.507 Sum_probs=14.0
Q ss_pred cCCCCccCHHHHHHHHhh
Q psy18090 154 GDCNNEITFDSLQKWLST 171 (421)
Q Consensus 154 k~~d~~is~~ef~~Wl~~ 171 (421)
.+.++.++..+|..++..
T Consensus 11 ~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 11 KDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CCCCCcEeHHHHHHHHHh
Confidence 455678999999988764
Done!