Query psy18091
Match_columns 377
No_of_seqs 241 out of 2363
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 22:22:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy18091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/18091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.5E-53 8.5E-58 387.8 45.8 329 43-376 8-337 (345)
2 1vyh_C Platelet-activating fac 100.0 4.3E-47 1.5E-51 354.6 39.0 290 43-373 101-410 (410)
3 2hes_X YDR267CP; beta-propelle 100.0 1.9E-46 6.5E-51 340.1 41.6 311 43-374 7-328 (330)
4 3ow8_A WD repeat-containing pr 100.0 4.5E-46 1.5E-50 336.3 38.9 291 44-373 26-320 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 9.1E-46 3.1E-50 337.0 40.9 291 42-371 47-340 (340)
6 3frx_A Guanine nucleotide-bind 100.0 3.5E-45 1.2E-49 330.2 40.0 300 44-375 11-318 (319)
7 4gqb_B Methylosome protein 50; 100.0 2.8E-45 9.7E-50 333.9 37.3 298 46-377 26-334 (344)
8 2pbi_B Guanine nucleotide-bind 100.0 6.7E-45 2.3E-49 333.1 39.4 292 42-371 56-354 (354)
9 3iz6_a 40S ribosomal protein R 100.0 5.7E-46 2E-50 343.5 30.5 303 43-375 59-376 (380)
10 4g56_B MGC81050 protein; prote 100.0 5.8E-45 2E-49 333.9 35.4 296 46-375 38-344 (357)
11 2ynn_A Coatomer subunit beta'; 100.0 2.3E-44 8E-49 322.6 38.2 295 42-375 5-303 (304)
12 2xzm_R RACK1; ribosome, transl 100.0 7.3E-44 2.5E-48 324.8 38.3 305 43-374 14-340 (343)
13 1nr0_A Actin interacting prote 100.0 9.6E-43 3.3E-47 341.3 41.7 304 43-373 183-610 (611)
14 4ery_A WD repeat-containing pr 100.0 3.6E-42 1.2E-46 309.2 41.3 291 44-373 17-311 (312)
15 4aow_A Guanine nucleotide-bind 100.0 2E-42 6.8E-47 313.7 39.6 305 44-376 32-339 (340)
16 1nr0_A Actin interacting prote 100.0 2.1E-42 7.2E-47 338.9 41.1 301 43-374 140-567 (611)
17 1erj_A Transcriptional repress 100.0 5E-42 1.7E-46 318.5 40.2 307 48-375 62-390 (393)
18 3dm0_A Maltose-binding peripla 100.0 2.3E-41 8E-46 336.4 37.9 303 44-374 376-693 (694)
19 1k8k_C P40, ARP2/3 complex 41 100.0 6.8E-41 2.3E-45 307.4 37.4 309 46-374 4-361 (372)
20 2ymu_A WD-40 repeat protein; u 100.0 1E-40 3.6E-45 324.3 39.4 282 43-371 296-577 (577)
21 3dwl_C Actin-related protein 2 100.0 5E-42 1.7E-46 316.1 25.3 311 45-372 6-377 (377)
22 4e54_B DNA damage-binding prot 100.0 5.6E-41 1.9E-45 315.6 30.5 298 45-376 114-432 (435)
23 1gxr_A ESG1, transducin-like e 100.0 3.4E-39 1.2E-43 291.7 40.2 290 46-373 47-336 (337)
24 3k26_A Polycomb protein EED; W 100.0 4.2E-40 1.5E-44 301.1 34.1 314 45-374 13-366 (366)
25 3ei3_B DNA damage-binding prot 100.0 1E-39 3.6E-44 301.5 36.1 308 44-374 67-382 (383)
26 2pm7_B Protein transport prote 100.0 2.5E-39 8.6E-44 288.9 36.7 260 45-320 4-284 (297)
27 2ynn_A Coatomer subunit beta'; 100.0 9.5E-40 3.2E-44 292.6 34.0 249 94-376 10-261 (304)
28 3zwl_B Eukaryotic translation 100.0 5.2E-39 1.8E-43 294.0 39.0 293 44-375 26-347 (369)
29 2ymu_A WD-40 repeat protein; u 100.0 5.4E-39 1.8E-43 312.3 40.6 285 43-374 255-539 (577)
30 3gre_A Serine/threonine-protei 100.0 8E-40 2.7E-44 307.5 31.4 319 43-371 55-437 (437)
31 3bg1_A Protein SEC13 homolog; 100.0 3.1E-40 1.1E-44 297.5 26.8 259 44-318 7-290 (316)
32 2pm9_A Protein WEB1, protein t 100.0 3.5E-39 1.2E-43 300.6 30.6 304 47-376 64-416 (416)
33 3i2n_A WD repeat-containing pr 100.0 1.4E-38 4.9E-43 290.1 33.9 306 45-375 13-354 (357)
34 3ow8_A WD repeat-containing pr 100.0 2.4E-38 8.1E-43 285.7 34.8 246 44-319 74-319 (321)
35 1sq9_A Antiviral protein SKI8; 100.0 1.6E-38 5.4E-43 294.5 34.4 306 43-375 9-396 (397)
36 2pm7_B Protein transport prote 100.0 7.6E-38 2.6E-42 279.3 37.0 262 93-375 5-286 (297)
37 1vyh_C Platelet-activating fac 100.0 1.4E-38 4.9E-43 296.9 33.5 248 42-319 142-409 (410)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 1E-37 3.4E-42 284.5 38.0 264 94-374 12-283 (345)
39 2pm9_A Protein WEB1, protein t 100.0 2.5E-39 8.6E-44 301.6 27.4 295 49-375 11-338 (416)
40 4gqb_B Methylosome protein 50; 100.0 8.6E-38 2.9E-42 284.5 35.5 248 49-322 81-332 (344)
41 2hes_X YDR267CP; beta-propelle 100.0 1.8E-37 6.3E-42 281.0 37.0 262 94-374 11-280 (330)
42 3odt_A Protein DOA1; ubiquitin 100.0 3.3E-37 1.1E-41 275.9 36.5 285 43-376 11-298 (313)
43 1r5m_A SIR4-interacting protei 100.0 1.7E-37 5.8E-42 289.3 35.8 301 47-373 42-424 (425)
44 2j04_B YDR362CP, TAU91; beta p 100.0 1E-38 3.5E-43 305.3 28.0 299 44-375 201-518 (524)
45 4h5i_A Guanine nucleotide-exch 100.0 5E-38 1.7E-42 288.7 30.8 293 51-374 15-343 (365)
46 3vl1_A 26S proteasome regulato 100.0 7.4E-37 2.5E-41 285.5 39.1 303 44-374 92-419 (420)
47 4a11_B DNA excision repair pro 100.0 1.8E-36 6.3E-41 281.0 40.6 305 44-376 37-367 (408)
48 3f3f_A Nucleoporin SEH1; struc 100.0 4.9E-37 1.7E-41 278.0 35.8 303 44-376 5-339 (351)
49 1got_B GT-beta; complex (GTP-b 100.0 5.7E-37 2E-41 278.9 36.3 252 42-318 89-340 (340)
50 4gga_A P55CDC, cell division c 100.0 1.8E-36 6E-41 283.6 39.2 283 53-374 108-395 (420)
51 3jrp_A Fusion protein of prote 100.0 8.4E-37 2.9E-41 280.5 35.5 261 43-318 4-284 (379)
52 4aez_A CDC20, WD repeat-contai 100.0 9.7E-37 3.3E-41 283.6 33.5 289 46-376 87-382 (401)
53 4ggc_A P55CDC, cell division c 100.0 7.3E-36 2.5E-40 267.9 37.8 283 53-374 28-315 (318)
54 1gxr_A ESG1, transducin-like e 100.0 2.6E-36 9E-41 272.7 34.7 288 49-376 8-298 (337)
55 3vl1_A 26S proteasome regulato 100.0 1.3E-36 4.4E-41 283.8 33.3 287 51-374 57-365 (420)
56 4g56_B MGC81050 protein; prote 100.0 2.9E-36 1E-40 276.1 33.4 251 46-322 90-344 (357)
57 3v7d_B Cell division control p 100.0 9.3E-36 3.2E-40 282.0 37.0 286 44-376 115-423 (464)
58 3dw8_B Serine/threonine-protei 100.0 4.2E-36 1.4E-40 282.5 34.4 305 48-373 26-445 (447)
59 4ery_A WD repeat-containing pr 100.0 1.7E-35 5.8E-40 265.6 35.3 250 93-376 19-270 (312)
60 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-35 3.7E-40 313.5 39.0 305 44-375 609-1035(1249)
61 3mkq_A Coatomer beta'-subunit; 100.0 9.3E-36 3.2E-40 300.9 36.6 295 42-374 5-302 (814)
62 2pbi_B Guanine nucleotide-bind 100.0 2.2E-35 7.4E-40 270.0 35.6 252 44-318 100-354 (354)
63 1yfq_A Cell cycle arrest prote 100.0 1.2E-35 4.2E-40 269.4 30.4 291 45-371 6-321 (342)
64 1p22_A F-BOX/WD-repeat protein 100.0 4.8E-35 1.6E-39 275.1 35.2 287 46-375 129-415 (435)
65 3frx_A Guanine nucleotide-bind 100.0 8.2E-35 2.8E-39 262.3 35.3 246 43-320 58-316 (319)
66 2oaj_A Protein SNI1; WD40 repe 100.0 8.7E-35 3E-39 295.7 38.2 202 46-262 13-241 (902)
67 2xzm_R RACK1; ribosome, transl 100.0 6.8E-35 2.3E-39 265.5 33.7 259 43-320 69-339 (343)
68 2oaj_A Protein SNI1; WD40 repe 100.0 2.9E-35 1E-39 299.2 33.9 321 44-372 145-659 (902)
69 3mmy_A MRNA export factor; mRN 100.0 4E-35 1.4E-39 268.0 31.4 294 42-372 31-344 (368)
70 1pgu_A Actin interacting prote 100.0 3.4E-34 1.2E-38 280.0 40.0 293 42-375 195-615 (615)
71 3v7d_B Cell division control p 100.0 2.4E-34 8E-39 272.3 37.3 287 41-373 153-462 (464)
72 1erj_A Transcriptional repress 100.0 1.6E-34 5.6E-39 267.9 34.5 245 52-320 125-388 (393)
73 3iz6_a 40S ribosomal protein R 100.0 3.6E-35 1.2E-39 271.2 28.1 263 41-321 99-375 (380)
74 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.1E-34 2.8E-38 267.4 37.4 283 42-376 110-393 (445)
75 3jro_A Fusion protein of prote 100.0 7.6E-35 2.6E-39 291.7 31.6 216 44-263 3-238 (753)
76 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-34 5.5E-39 304.6 34.7 310 42-376 649-1076(1249)
77 1pgu_A Actin interacting prote 100.0 6E-34 2E-38 278.3 36.3 252 41-321 54-328 (615)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4E-33 1.4E-37 262.7 39.2 288 42-376 151-444 (445)
79 2j04_A TAU60, YPL007P, hypothe 100.0 6.8E-35 2.3E-39 273.8 25.4 268 50-373 15-296 (588)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 2.6E-34 9E-39 267.2 28.7 293 51-375 35-343 (402)
81 3dwl_C Actin-related protein 2 100.0 8.8E-35 3E-39 267.7 25.1 268 95-373 9-280 (377)
82 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-35 4.2E-40 284.0 19.6 269 49-375 132-429 (524)
83 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-33 9.3E-38 256.7 33.7 266 95-374 6-274 (372)
84 2xyi_A Probable histone-bindin 100.0 1.7E-33 5.7E-38 264.3 29.8 272 45-374 123-410 (430)
85 4aow_A Guanine nucleotide-bind 100.0 4.7E-32 1.6E-36 245.4 35.8 248 93-375 34-287 (340)
86 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-32 3.7E-37 278.5 34.7 312 32-373 37-385 (814)
87 4h5i_A Guanine nucleotide-exch 100.0 3.1E-33 1.1E-37 256.7 27.0 255 45-322 68-344 (365)
88 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-32 9.5E-37 257.4 33.8 298 50-375 4-392 (450)
89 1sq9_A Antiviral protein SKI8; 100.0 2E-32 7E-37 253.4 30.8 256 43-321 55-395 (397)
90 3gre_A Serine/threonine-protei 100.0 1.6E-33 5.3E-38 264.6 23.5 285 58-375 35-360 (437)
91 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-32 2.9E-36 246.2 34.4 292 45-374 14-336 (355)
92 3ei3_B DNA damage-binding prot 100.0 3.2E-32 1.1E-36 251.3 31.4 258 94-376 70-341 (383)
93 3dm0_A Maltose-binding peripla 100.0 4.5E-32 1.6E-36 269.5 34.7 249 94-375 379-633 (694)
94 4e54_B DNA damage-binding prot 100.0 8E-33 2.7E-37 260.0 25.9 210 94-322 116-328 (435)
95 1r5m_A SIR4-interacting protei 100.0 1.6E-31 5.3E-36 249.0 34.2 258 48-319 106-423 (425)
96 3bg1_A Protein SEC13 homolog; 100.0 7E-33 2.4E-37 249.3 23.8 217 43-262 50-292 (316)
97 3dw8_B Serine/threonine-protei 100.0 2.6E-32 9E-37 256.6 28.7 259 95-376 26-375 (447)
98 3k26_A Polycomb protein EED; W 100.0 9.1E-33 3.1E-37 252.3 24.8 251 49-319 68-364 (366)
99 3i2n_A WD repeat-containing pr 100.0 1.5E-31 5.2E-36 243.5 32.1 265 47-321 62-353 (357)
100 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-31 7.7E-36 237.9 31.2 243 93-376 14-257 (313)
101 1yfq_A Cell cycle arrest prote 100.0 9.9E-32 3.4E-36 243.6 28.8 255 94-375 8-283 (342)
102 4aez_A CDC20, WD repeat-contai 100.0 6.1E-31 2.1E-35 244.5 33.7 245 49-323 133-382 (401)
103 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-31 5E-36 243.4 28.1 272 56-372 42-331 (343)
104 3zwl_B Eukaryotic translation 100.0 2.2E-30 7.4E-35 236.6 34.0 252 41-321 65-346 (369)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-30 5.4E-35 241.7 30.3 258 42-321 73-342 (402)
106 4gga_A P55CDC, cell division c 100.0 3.9E-30 1.3E-34 240.5 32.7 248 45-321 142-395 (420)
107 2j04_A TAU60, YPL007P, hypothe 100.0 7.4E-32 2.5E-36 253.2 20.7 251 48-363 83-350 (588)
108 4gq1_A NUP37; propeller, trans 100.0 4.4E-31 1.5E-35 244.8 25.7 252 105-373 97-388 (393)
109 4a11_B DNA excision repair pro 100.0 5.9E-30 2E-34 237.1 31.9 289 47-374 96-405 (408)
110 3jrp_A Fusion protein of prote 100.0 4.1E-29 1.4E-33 229.1 30.7 219 42-263 47-287 (379)
111 4ggc_A P55CDC, cell division c 100.0 9.6E-29 3.3E-33 221.4 31.9 247 45-320 62-314 (318)
112 1p22_A F-BOX/WD-repeat protein 100.0 4.8E-29 1.6E-33 234.2 30.8 250 42-322 165-415 (435)
113 3mmy_A MRNA export factor; mRN 100.0 9.8E-29 3.3E-33 225.5 29.8 257 93-375 35-305 (368)
114 4gq1_A NUP37; propeller, trans 100.0 5.7E-30 2E-34 237.3 20.0 248 48-318 87-386 (393)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-28 1.6E-32 228.5 32.9 255 45-322 97-392 (450)
116 3bws_A Protein LP49; two-domai 100.0 3.4E-28 1.1E-32 227.8 31.4 284 51-374 123-432 (433)
117 3f3f_A Nucleoporin SEH1; struc 100.0 3.4E-28 1.2E-32 219.8 30.2 220 42-262 49-336 (351)
118 2xyi_A Probable histone-bindin 100.0 7.2E-28 2.5E-32 225.9 27.7 220 41-262 172-409 (430)
119 3lrv_A PRE-mRNA-splicing facto 100.0 6.5E-28 2.2E-32 219.3 25.7 241 50-318 76-330 (343)
120 1l0q_A Surface layer protein; 100.0 1.7E-26 5.7E-31 213.3 34.3 267 63-375 3-276 (391)
121 2w18_A PALB2, fancn, partner a 100.0 8.2E-27 2.8E-31 206.4 30.3 305 20-373 13-356 (356)
122 3jro_A Fusion protein of prote 100.0 1.1E-27 3.9E-32 239.8 27.1 219 42-263 45-285 (753)
123 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-26 4.1E-31 212.0 29.6 251 94-375 16-272 (355)
124 1l0q_A Surface layer protein; 100.0 7.6E-25 2.6E-29 202.2 39.6 296 44-375 26-343 (391)
125 2w18_A PALB2, fancn, partner a 100.0 2.1E-26 7.1E-31 203.8 22.6 252 43-319 79-355 (356)
126 3bws_A Protein LP49; two-domai 99.9 1.2E-23 4.1E-28 196.8 30.6 242 45-320 164-431 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-24 8.5E-29 200.8 25.2 281 50-375 62-388 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 6E-24 2.1E-28 198.2 25.9 263 44-353 111-408 (415)
129 1ri6_A Putative isomerase YBHE 99.9 2.1E-22 7.2E-27 181.9 34.1 289 64-374 7-308 (343)
130 2ecf_A Dipeptidyl peptidase IV 99.9 2.1E-23 7.1E-28 208.6 29.3 284 50-374 36-413 (741)
131 1nir_A Nitrite reductase; hemo 99.9 2.2E-22 7.6E-27 193.5 34.1 303 53-376 181-516 (543)
132 1xfd_A DIP, dipeptidyl aminope 99.9 5.4E-23 1.8E-27 205.0 24.3 288 51-374 17-393 (723)
133 1nir_A Nitrite reductase; hemo 99.9 9.6E-22 3.3E-26 189.1 30.5 285 58-375 145-459 (543)
134 1ri6_A Putative isomerase YBHE 99.9 5.6E-21 1.9E-25 172.5 33.6 259 48-322 35-309 (343)
135 3hfq_A Uncharacterized protein 99.9 9.2E-21 3.1E-25 172.1 33.2 282 70-374 14-317 (347)
136 3u4y_A Uncharacterized protein 99.9 4.1E-21 1.4E-25 173.0 28.5 291 56-375 3-305 (331)
137 2ojh_A Uncharacterized protein 99.9 7.9E-22 2.7E-26 173.9 23.1 259 67-364 17-292 (297)
138 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-20 4.1E-25 176.7 30.2 211 50-264 36-279 (434)
139 2z3z_A Dipeptidyl aminopeptida 99.9 5.2E-21 1.8E-25 190.3 29.1 285 51-375 82-436 (706)
140 2ojh_A Uncharacterized protein 99.9 5E-21 1.7E-25 168.7 24.5 240 45-312 36-293 (297)
141 3hfq_A Uncharacterized protein 99.9 9.8E-20 3.3E-24 165.3 31.5 260 47-323 36-319 (347)
142 1k32_A Tricorn protease; prote 99.9 2.3E-20 8E-25 193.3 29.0 292 49-376 294-639 (1045)
143 3scy_A Hypothetical bacterial 99.9 1.3E-18 4.6E-23 158.7 35.8 280 69-374 24-337 (361)
144 2ecf_A Dipeptidyl peptidase IV 99.9 7.2E-20 2.5E-24 183.0 29.7 283 52-373 110-458 (741)
145 3vgz_A Uncharacterized protein 99.9 9.1E-19 3.1E-23 158.8 33.6 276 50-363 40-334 (353)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 2.8E-20 9.6E-25 174.2 24.0 203 98-322 37-279 (434)
147 1k32_A Tricorn protease; prote 99.9 2.8E-20 9.7E-25 192.7 25.9 281 44-373 197-501 (1045)
148 1xfd_A DIP, dipeptidyl aminope 99.9 2.3E-19 7.9E-24 178.8 31.4 291 44-365 51-432 (723)
149 3o4h_A Acylamino-acid-releasin 99.9 8.1E-20 2.8E-24 177.7 25.3 269 50-373 21-314 (582)
150 2z3z_A Dipeptidyl aminopeptida 99.9 7.2E-20 2.5E-24 182.0 25.2 282 53-374 28-391 (706)
151 3scy_A Hypothetical bacterial 99.9 6.7E-18 2.3E-22 154.0 36.4 280 49-351 48-360 (361)
152 1pby_B Quinohemoprotein amine 99.9 2.9E-19 1E-23 160.8 26.1 268 63-376 2-312 (337)
153 1z68_A Fibroblast activation p 99.8 2.4E-19 8.2E-24 178.7 22.5 283 55-374 20-391 (719)
154 1jmx_B Amine dehydrogenase; ox 99.8 1.7E-18 5.8E-23 156.7 26.2 270 55-375 4-326 (349)
155 3u4y_A Uncharacterized protein 99.8 1.7E-17 5.8E-22 149.3 30.7 252 47-321 37-304 (331)
156 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.1E-17 3.7E-22 153.1 28.8 293 65-375 5-342 (365)
157 3pe7_A Oligogalacturonate lyas 99.8 8.7E-18 3E-22 154.6 26.1 291 45-375 25-383 (388)
158 1z68_A Fibroblast activation p 99.8 4.9E-18 1.7E-22 169.2 24.2 290 52-375 61-444 (719)
159 3vgz_A Uncharacterized protein 99.8 6.5E-17 2.2E-21 146.5 28.8 242 97-375 40-304 (353)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.5E-17 2.2E-21 147.9 27.9 255 50-321 39-341 (365)
161 1pby_B Quinohemoprotein amine 99.8 5.9E-17 2E-21 145.6 23.2 236 52-322 35-311 (337)
162 3o4h_A Acylamino-acid-releasin 99.8 9.7E-18 3.3E-22 163.0 18.8 233 96-372 20-274 (582)
163 4a5s_A Dipeptidyl peptidase 4 99.8 5.3E-17 1.8E-21 162.3 22.9 288 51-374 17-398 (740)
164 3azo_A Aminopeptidase; POP fam 99.8 3.8E-16 1.3E-20 154.0 26.7 292 44-373 17-366 (662)
165 1q7f_A NHL, brain tumor CG1071 99.7 5.4E-14 1.8E-18 123.7 31.0 242 47-321 26-280 (286)
166 3c5m_A Oligogalacturonate lyas 99.7 9.5E-16 3.2E-20 141.1 19.9 277 51-374 36-382 (396)
167 1q7f_A NHL, brain tumor CG1071 99.7 6.4E-14 2.2E-18 123.3 29.9 246 95-375 27-281 (286)
168 2gop_A Trilobed protease; beta 99.7 6E-14 2.1E-18 126.8 29.7 258 51-373 15-330 (347)
169 3fvz_A Peptidyl-glycine alpha- 99.7 7.9E-14 2.7E-18 125.5 29.2 248 50-320 23-321 (329)
170 3azo_A Aminopeptidase; POP fam 99.7 1.9E-14 6.6E-19 141.8 26.3 253 43-320 60-366 (662)
171 3fvz_A Peptidyl-glycine alpha- 99.7 4.3E-14 1.5E-18 127.3 25.6 251 97-375 23-323 (329)
172 4a5s_A Dipeptidyl peptidase 4 99.7 9.4E-14 3.2E-18 138.8 30.6 201 53-261 64-351 (740)
173 1jmx_B Amine dehydrogenase; ox 99.6 8.6E-15 2.9E-19 132.2 18.6 192 52-261 44-323 (349)
174 2dg1_A DRP35, lactonase; beta 99.6 3.1E-13 1.1E-17 121.5 27.8 284 51-363 6-300 (333)
175 2xdw_A Prolyl endopeptidase; a 99.6 3.7E-13 1.3E-17 133.8 30.2 287 60-376 81-416 (710)
176 2z2n_A Virginiamycin B lyase; 99.6 1.6E-11 5.6E-16 108.0 37.5 288 46-376 10-297 (299)
177 2bkl_A Prolyl endopeptidase; m 99.6 5.5E-14 1.9E-18 139.5 23.5 283 59-375 76-398 (695)
178 2bkl_A Prolyl endopeptidase; m 99.6 1.2E-13 4.2E-18 136.9 25.6 246 47-321 117-397 (695)
179 3e5z_A Putative gluconolactona 99.6 4.7E-13 1.6E-17 118.4 24.2 234 46-312 23-278 (296)
180 2xdw_A Prolyl endopeptidase; a 99.6 1.3E-12 4.3E-17 130.0 29.4 247 47-321 121-414 (710)
181 2dg1_A DRP35, lactonase; beta 99.6 3.7E-12 1.3E-16 114.4 29.8 241 45-311 39-300 (333)
182 3pe7_A Oligogalacturonate lyas 99.6 1.9E-13 6.6E-18 125.4 21.2 238 103-375 41-330 (388)
183 2oiz_A Aromatic amine dehydrog 99.6 1.3E-12 4.6E-17 119.0 26.5 266 70-375 29-335 (361)
184 3e5z_A Putative gluconolactona 99.6 3.3E-12 1.1E-16 112.9 28.0 233 96-365 26-278 (296)
185 2gop_A Trilobed protease; beta 99.6 3.2E-12 1.1E-16 115.4 28.4 222 51-320 59-330 (347)
186 2oiz_A Aromatic amine dehydrog 99.6 2E-12 6.7E-17 117.9 26.4 274 45-354 46-359 (361)
187 1rwi_B Serine/threonine-protei 99.5 5E-12 1.7E-16 109.9 25.4 238 52-320 25-263 (270)
188 1yr2_A Prolyl oligopeptidase; 99.5 3.8E-12 1.3E-16 127.1 26.1 284 59-375 115-442 (741)
189 1rwi_B Serine/threonine-protei 99.5 8.9E-12 3E-16 108.3 24.8 241 99-376 25-266 (270)
190 2qc5_A Streptogramin B lactona 99.5 8.4E-10 2.9E-14 97.0 36.4 281 49-372 18-298 (300)
191 1qks_A Cytochrome CD1 nitrite 99.5 5.6E-10 1.9E-14 107.3 36.4 307 52-376 198-540 (567)
192 3c5m_A Oligogalacturonate lyas 99.5 8.7E-13 3E-17 121.2 15.4 235 100-375 38-330 (396)
193 1yr2_A Prolyl oligopeptidase; 99.4 3.3E-11 1.1E-15 120.3 25.8 249 47-321 159-441 (741)
194 1xip_A Nucleoporin NUP159; bet 99.4 3E-12 1E-16 116.4 15.7 178 52-251 39-232 (388)
195 2z2n_A Virginiamycin B lyase; 99.4 1.7E-09 6E-14 94.9 32.7 242 96-373 13-254 (299)
196 3dsm_A Uncharacterized protein 99.4 1.3E-10 4.4E-15 104.4 25.0 263 70-373 15-301 (328)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2.9E-10 1E-14 100.9 24.9 250 98-375 18-300 (314)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 5.1E-10 1.7E-14 99.3 26.4 243 51-320 18-298 (314)
199 3no2_A Uncharacterized protein 99.3 9E-10 3.1E-14 96.3 24.1 184 61-261 4-193 (276)
200 1qks_A Cytochrome CD1 nitrite 99.3 1E-08 3.6E-13 98.5 32.4 288 59-375 164-478 (567)
201 3hrp_A Uncharacterized protein 99.3 4.4E-09 1.5E-13 97.3 27.4 247 98-372 131-408 (409)
202 3g4e_A Regucalcin; six bladed 99.3 5E-09 1.7E-13 92.5 26.7 232 51-310 13-261 (297)
203 3hrp_A Uncharacterized protein 99.3 5.6E-09 1.9E-13 96.6 27.8 241 51-318 131-407 (409)
204 2qc5_A Streptogramin B lactona 99.3 3.6E-08 1.2E-12 86.4 31.7 242 96-373 18-259 (300)
205 3no2_A Uncharacterized protein 99.2 2.9E-09 9.8E-14 93.0 23.1 221 108-361 4-230 (276)
206 1xip_A Nucleoporin NUP159; bet 99.2 4.1E-10 1.4E-14 102.4 17.6 179 99-307 39-230 (388)
207 3sjl_D Methylamine dehydrogena 99.2 2E-08 6.8E-13 91.1 28.6 288 56-376 38-365 (386)
208 3iuj_A Prolyl endopeptidase; h 99.2 2.9E-09 9.9E-14 105.4 24.4 240 47-320 125-404 (693)
209 2mad_H Methylamine dehydrogena 99.2 2.1E-07 7.2E-12 84.8 33.3 286 57-376 27-352 (373)
210 3dsm_A Uncharacterized protein 99.2 2.9E-08 1E-12 88.9 27.3 237 51-320 44-301 (328)
211 3g4e_A Regucalcin; six bladed 99.2 6.3E-08 2.2E-12 85.4 28.7 235 99-364 14-263 (297)
212 3dr2_A Exported gluconolactona 99.1 1.9E-08 6.5E-13 89.1 23.8 237 45-316 39-302 (305)
213 3iuj_A Prolyl endopeptidase; h 99.1 4.8E-09 1.6E-13 103.9 21.6 247 95-375 126-406 (693)
214 2ghs_A AGR_C_1268P; regucalcin 99.1 1.5E-07 5E-12 84.2 28.4 226 53-310 51-291 (326)
215 3dr2_A Exported gluconolactona 99.1 1.1E-08 3.8E-13 90.6 20.3 197 46-257 81-301 (305)
216 2mad_H Methylamine dehydrogena 99.1 5.1E-07 1.7E-11 82.3 30.3 241 55-322 70-351 (373)
217 2ghs_A AGR_C_1268P; regucalcin 99.0 4.4E-07 1.5E-11 81.1 28.6 231 100-365 51-294 (326)
218 2qe8_A Uncharacterized protein 99.0 7.3E-08 2.5E-12 86.9 23.2 247 51-317 17-317 (343)
219 3c75_H MADH, methylamine dehyd 99.0 3.8E-07 1.3E-11 84.0 27.5 284 60-376 82-404 (426)
220 3sjl_D Methylamine dehydrogena 98.9 3.7E-07 1.3E-11 82.7 23.7 243 55-322 82-364 (386)
221 2qe8_A Uncharacterized protein 98.8 7.4E-08 2.5E-12 86.8 14.9 238 98-372 17-276 (343)
222 1mda_H Methylamine dehydrogena 98.8 2.2E-06 7.6E-11 77.5 22.5 265 73-376 47-348 (368)
223 3c75_H MADH, methylamine dehyd 98.7 2.1E-06 7.1E-11 79.1 21.6 242 55-322 122-403 (426)
224 2hz6_A Endoplasmic reticulum t 98.6 9.1E-09 3.1E-13 93.8 2.0 180 61-262 8-191 (369)
225 2ece_A 462AA long hypothetical 98.6 7.8E-05 2.7E-09 68.3 27.0 232 60-309 93-399 (462)
226 2ece_A 462AA long hypothetical 98.6 1E-05 3.4E-10 74.2 21.1 192 53-251 140-399 (462)
227 1yiq_A Quinohemoprotein alcoho 98.6 3.7E-06 1.3E-10 82.9 19.9 196 62-262 70-337 (689)
228 2fp8_A Strictosidine synthase; 98.5 9.6E-05 3.3E-09 65.5 24.9 190 52-252 20-248 (322)
229 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00022 7.7E-09 64.5 26.9 273 62-376 53-339 (376)
230 1kb0_A Quinohemoprotein alcoho 98.4 2E-05 6.7E-10 77.6 20.9 156 62-221 128-350 (677)
231 1kb0_A Quinohemoprotein alcoho 98.4 2E-05 6.9E-10 77.5 20.6 195 62-262 77-345 (677)
232 1yiq_A Quinohemoprotein alcoho 98.4 4.1E-05 1.4E-09 75.5 21.5 155 62-220 121-341 (689)
233 2iwa_A Glutamine cyclotransfer 98.4 0.00025 8.6E-09 60.7 23.6 201 52-263 22-237 (266)
234 2fp8_A Strictosidine synthase; 98.4 0.00056 1.9E-08 60.5 27.0 245 99-375 20-314 (322)
235 2hz6_A Endoplasmic reticulum t 98.4 9.5E-08 3.2E-12 87.0 2.3 181 108-322 8-193 (369)
236 1k3i_A Galactose oxidase precu 98.3 7.2E-05 2.4E-09 73.4 22.0 116 55-173 190-324 (656)
237 2xe4_A Oligopeptidase B; hydro 98.2 6.5E-05 2.2E-09 74.9 19.1 204 47-260 169-395 (751)
238 3qqz_A Putative uncharacterize 98.2 0.0023 7.8E-08 54.4 25.4 206 45-259 21-249 (255)
239 1mda_H Methylamine dehydrogena 98.2 4.6E-05 1.6E-09 68.9 14.9 234 55-322 69-347 (368)
240 3nol_A Glutamine cyclotransfer 98.1 0.00092 3.2E-08 56.7 21.2 189 51-252 43-244 (262)
241 2p4o_A Hypothetical protein; p 98.1 0.0038 1.3E-07 54.7 28.7 198 51-261 32-240 (306)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0047 1.6E-07 55.7 28.5 261 62-371 103-375 (376)
243 2iwa_A Glutamine cyclotransfer 98.1 0.0018 6E-08 55.5 22.3 152 100-261 23-179 (266)
244 1npe_A Nidogen, entactin; glyc 98.1 0.0043 1.5E-07 53.1 28.2 188 63-261 2-196 (267)
245 3hxj_A Pyrrolo-quinoline quino 98.1 0.00059 2E-08 60.2 19.9 266 51-375 60-325 (330)
246 3nok_A Glutaminyl cyclase; bet 98.0 0.0036 1.2E-07 53.1 23.2 188 51-251 55-253 (268)
247 1fwx_A Nitrous oxide reductase 98.0 0.00056 1.9E-08 64.9 19.9 200 108-321 100-361 (595)
248 1fwx_A Nitrous oxide reductase 97.9 0.0016 5.4E-08 61.9 21.2 193 60-263 99-361 (595)
249 4a2l_A BT_4663, two-component 97.9 0.024 8.2E-07 56.7 34.5 292 51-374 263-571 (795)
250 1npe_A Nidogen, entactin; glyc 97.9 0.0083 2.8E-07 51.2 27.3 195 51-261 36-236 (267)
251 2xe4_A Oligopeptidase B; hydro 97.9 0.001 3.5E-08 66.2 20.1 201 99-320 175-397 (751)
252 3nol_A Glutamine cyclotransfer 97.9 0.0042 1.4E-07 52.7 20.8 194 100-310 45-244 (262)
253 3qqz_A Putative uncharacterize 97.9 0.0096 3.3E-07 50.5 25.9 207 95-318 24-250 (255)
254 2xbg_A YCF48-like protein; pho 97.9 0.013 4.5E-07 51.8 31.4 283 50-371 35-319 (327)
255 4a2l_A BT_4663, two-component 97.8 0.031 1.1E-06 55.9 35.2 241 51-319 357-612 (795)
256 1kv9_A Type II quinohemoprotei 97.8 0.0012 4.3E-08 64.7 18.6 195 62-262 66-332 (668)
257 1k3i_A Galactose oxidase precu 97.8 0.0021 7.2E-08 62.9 20.0 202 53-261 245-495 (656)
258 3v9f_A Two-component system se 97.8 0.04 1.4E-06 54.9 29.8 242 51-318 363-608 (781)
259 2xbg_A YCF48-like protein; pho 97.8 0.0061 2.1E-07 54.0 21.3 198 50-260 121-319 (327)
260 4hw6_A Hypothetical protein, I 97.7 0.017 6E-07 53.3 24.5 199 52-260 140-371 (433)
261 3hxj_A Pyrrolo-quinoline quino 97.7 0.004 1.4E-07 54.8 19.2 217 62-320 107-323 (330)
262 3tc9_A Hypothetical hydrolase; 97.7 0.03 1E-06 51.7 26.9 155 99-262 138-300 (430)
263 3mbr_X Glutamine cyclotransfer 97.7 0.019 6.4E-07 48.2 23.2 189 51-251 21-222 (243)
264 2p4o_A Hypothetical protein; p 97.7 0.025 8.5E-07 49.4 24.9 193 51-253 72-278 (306)
265 2p9w_A MAL S 1 allergenic prot 97.6 0.0065 2.2E-07 53.3 18.7 158 54-217 16-215 (334)
266 2p9w_A MAL S 1 allergenic prot 97.6 0.0044 1.5E-07 54.4 17.1 160 101-262 16-214 (334)
267 3v9f_A Two-component system se 97.5 0.085 2.9E-06 52.6 32.6 291 51-375 258-569 (781)
268 2ad6_A Methanol dehydrogenase 97.5 0.034 1.2E-06 53.3 23.5 194 62-262 62-334 (571)
269 1w6s_A Methanol dehydrogenase 97.5 0.027 9.4E-07 54.2 22.2 196 62-262 62-341 (599)
270 3tc9_A Hypothetical hydrolase; 97.4 0.076 2.6E-06 48.9 24.4 203 50-261 178-428 (430)
271 2ad6_A Methanol dehydrogenase 97.3 0.042 1.4E-06 52.7 21.2 154 62-222 115-340 (571)
272 3nok_A Glutaminyl cyclase; bet 97.2 0.079 2.7E-06 44.9 21.6 149 100-261 57-208 (268)
273 1kv9_A Type II quinohemoprotei 97.1 0.0071 2.4E-07 59.3 14.6 156 102-262 234-487 (668)
274 4hw6_A Hypothetical protein, I 97.1 0.16 5.3E-06 46.8 29.1 251 99-373 140-432 (433)
275 3a9g_A Putative uncharacterize 97.1 0.16 5.3E-06 45.4 22.7 240 51-309 29-330 (354)
276 3v65_B Low-density lipoprotein 97.0 0.2 7E-06 45.2 24.2 195 51-260 116-315 (386)
277 1ijq_A LDL receptor, low-densi 96.9 0.19 6.6E-06 44.0 26.1 202 51-261 30-236 (316)
278 3v64_C Agrin; beta propeller, 96.9 0.21 7.4E-06 44.4 24.2 195 51-260 73-272 (349)
279 1flg_A Protein (quinoprotein e 96.9 0.23 7.8E-06 47.7 22.2 57 119-176 291-359 (582)
280 3kya_A Putative phosphatase; s 96.9 0.3 1E-05 45.5 25.0 159 52-216 140-340 (496)
281 3sov_A LRP-6, low-density lipo 96.8 0.23 7.8E-06 43.6 24.0 197 51-261 35-236 (318)
282 3mbr_X Glutamine cyclotransfer 96.8 0.18 6.1E-06 42.2 24.0 193 99-310 22-223 (243)
283 3p5b_L Low density lipoprotein 96.7 0.33 1.1E-05 44.1 26.6 203 50-261 111-318 (400)
284 3kya_A Putative phosphatase; s 96.7 0.12 4E-06 48.3 18.0 160 100-261 141-339 (496)
285 1tl2_A L10, protein (tachylect 96.7 0.2 7E-06 41.1 18.7 188 62-262 4-207 (236)
286 3v64_C Agrin; beta propeller, 96.5 0.42 1.4E-05 42.5 27.3 193 52-261 35-232 (349)
287 1w6s_A Methanol dehydrogenase 96.5 0.58 2E-05 45.0 21.7 73 103-176 246-346 (599)
288 3m0c_C LDL receptor, low-densi 96.5 0.82 2.8E-05 45.5 26.6 202 50-260 423-629 (791)
289 2ism_A Putative oxidoreductase 96.4 0.46 1.6E-05 42.3 24.0 241 51-309 31-333 (352)
290 3pbp_A Nucleoporin NUP82; beta 96.3 0.6 2E-05 42.4 20.3 148 107-258 30-207 (452)
291 3amr_A 3-phytase; beta-propell 96.3 0.52 1.8E-05 41.7 20.5 193 61-262 39-262 (355)
292 3pbp_A Nucleoporin NUP82; beta 96.2 0.73 2.5E-05 41.8 19.0 150 59-213 29-208 (452)
293 3sre_A PON1, serum paraoxonase 96.1 0.72 2.5E-05 41.0 22.4 190 54-253 53-287 (355)
294 1flg_A Protein (quinoprotein e 96.0 0.58 2E-05 44.8 18.8 58 162-223 465-522 (582)
295 3sre_A PON1, serum paraoxonase 96.0 0.81 2.8E-05 40.7 18.4 153 51-207 112-287 (355)
296 1cru_A Protein (soluble quinop 95.9 0.51 1.7E-05 43.7 17.6 109 98-206 27-163 (454)
297 1n7d_A LDL receptor, low-densi 95.7 0.051 1.8E-06 53.4 10.4 202 51-261 406-612 (699)
298 3a9g_A Putative uncharacterize 95.5 1.2 4.1E-05 39.6 26.1 106 98-206 29-154 (354)
299 1tl2_A L10, protein (tachylect 95.3 0.58 2E-05 38.4 13.6 109 142-256 41-156 (236)
300 1cru_A Protein (soluble quinop 95.3 1 3.6E-05 41.5 17.3 108 51-160 27-162 (454)
301 3ei3_A DNA damage-binding prot 95.0 4.2 0.00014 42.4 33.1 188 50-251 553-755 (1158)
302 2ism_A Putative oxidoreductase 94.9 1.9 6.5E-05 38.2 28.7 104 99-205 32-153 (352)
303 3v65_B Low-density lipoprotein 94.8 2.2 7.4E-05 38.4 27.5 230 102-371 81-315 (386)
304 3ii7_A Kelch-like protein 7; p 94.4 2.2 7.6E-05 36.6 18.6 179 61-253 55-257 (306)
305 3p5b_L Low density lipoprotein 94.3 2.9 9.9E-05 37.8 28.5 178 71-261 91-275 (400)
306 2vpj_A Kelch-like protein 12; 93.9 2.7 9.1E-05 35.9 20.5 181 61-253 62-263 (301)
307 2uvk_A YJHT; unknown function, 93.9 3.1 0.00011 36.6 17.6 98 61-162 19-128 (357)
308 3das_A Putative oxidoreductase 93.9 3.2 0.00011 36.7 27.9 156 98-254 32-224 (347)
309 2xn4_A Kelch-like protein 2; s 93.8 2.9 9.8E-05 35.8 18.9 180 61-254 61-262 (302)
310 3m0c_C LDL receptor, low-densi 93.8 5.9 0.0002 39.4 27.6 181 117-320 402-588 (791)
311 2g8s_A Glucose/sorbosone dehyd 93.8 0.95 3.2E-05 40.2 12.7 106 99-206 19-149 (353)
312 1n7d_A LDL receptor, low-densi 93.7 0.61 2.1E-05 45.8 12.3 155 98-261 406-569 (699)
313 3amr_A 3-phytase; beta-propell 93.5 3.8 0.00013 36.2 23.7 202 152-373 39-262 (355)
314 2vpj_A Kelch-like protein 12; 93.0 3.9 0.00013 34.9 23.1 135 119-261 31-182 (301)
315 1zgk_A Kelch-like ECH-associat 92.9 4.1 0.00014 35.0 16.0 111 108-225 121-246 (308)
316 4a0p_A LRP6, LRP-6, low-densit 92.9 7.2 0.00024 37.6 24.9 193 51-260 37-234 (628)
317 3sov_A LRP-6, low-density lipo 92.6 4.7 0.00016 35.0 24.8 221 118-373 12-237 (318)
318 3das_A Putative oxidoreductase 92.2 5.8 0.0002 35.0 26.5 154 49-204 30-219 (347)
319 2xn4_A Kelch-like protein 2; s 92.2 5 0.00017 34.2 23.8 126 119-253 30-165 (302)
320 1ijq_A LDL receptor, low-densi 91.9 5.8 0.0002 34.3 30.9 223 118-373 9-237 (316)
321 2uvk_A YJHT; unknown function, 91.6 6.3 0.00022 34.5 15.2 51 119-170 168-224 (357)
322 3ii7_A Kelch-like protein 7; p 91.5 6 0.0002 33.8 22.4 145 108-261 55-223 (306)
323 3ei3_A DNA damage-binding prot 89.8 21 0.00072 37.2 31.2 113 98-216 514-635 (1158)
324 2zwa_A Leucine carboxyl methyl 89.0 18 0.00061 35.3 17.0 155 60-218 396-578 (695)
325 4a0p_A LRP6, LRP-6, low-densit 88.8 18 0.0006 34.9 25.0 196 51-260 340-546 (628)
326 2g8s_A Glucose/sorbosone dehyd 88.4 13 0.00043 32.8 27.9 152 51-203 18-214 (353)
327 3s94_A LRP-6, low-density lipo 88.3 19 0.00064 34.6 33.1 198 50-261 39-241 (619)
328 1zgk_A Kelch-like ECH-associat 88.2 11 0.00039 32.1 22.8 145 108-261 24-191 (308)
329 3s94_A LRP-6, low-density lipo 87.1 22 0.00075 34.1 23.8 159 51-219 349-512 (619)
330 2wg3_C Hedgehog-interacting pr 85.9 21 0.0007 32.9 14.4 112 51-162 14-159 (463)
331 2zwa_A Leucine carboxyl methyl 84.9 25 0.00086 34.2 15.3 68 107-174 499-579 (695)
332 4asc_A Kelch repeat and BTB do 83.5 20 0.00069 30.6 22.9 176 64-254 7-207 (315)
333 4asc_A Kelch repeat and BTB do 79.2 29 0.00098 29.6 25.0 135 119-261 13-172 (315)
334 1xi4_A Clathrin heavy chain; a 78.8 73 0.0025 34.0 18.9 199 105-323 73-291 (1630)
335 2be1_A Serine/threonine-protei 71.6 11 0.00036 33.2 7.2 111 110-223 11-136 (339)
336 2woz_A Kelch repeat and BTB do 69.5 52 0.0018 27.9 19.2 137 108-253 109-263 (318)
337 2xzh_A Clathrin heavy chain 1; 65.6 70 0.0024 28.0 29.2 201 104-323 73-292 (365)
338 2woz_A Kelch repeat and BTB do 62.8 70 0.0024 27.1 23.5 94 120-217 25-136 (318)
339 3b7f_A Glycosyl hydrolase, BNR 58.7 95 0.0033 27.3 19.6 188 51-243 55-288 (394)
340 3f7f_A Nucleoporin NUP120; nuc 57.9 1.3E+02 0.0045 29.3 12.3 30 143-174 223-252 (729)
341 4gq2_M Nucleoporin NUP120; bet 54.4 35 0.0012 34.6 8.2 32 344-376 237-268 (950)
342 2wg3_C Hedgehog-interacting pr 53.8 1.3E+02 0.0045 27.4 15.7 66 186-251 13-91 (463)
343 3zwu_A Alkaline phosphatase PH 51.7 64 0.0022 30.7 9.0 58 101-159 479-548 (592)
344 3qhy_B Beta-lactamase inhibito 47.6 1.2E+02 0.0042 25.3 15.2 179 52-260 64-243 (282)
345 3b7f_A Glycosyl hydrolase, BNR 46.9 1.5E+02 0.0051 26.0 26.3 184 64-254 24-254 (394)
346 3qhy_B Beta-lactamase inhibito 46.8 1.3E+02 0.0044 25.2 19.3 220 52-320 25-245 (282)
347 1xi4_A Clathrin heavy chain; a 41.9 3.6E+02 0.012 29.0 16.6 143 71-220 124-292 (1630)
348 2be1_A Serine/threonine-protei 40.9 31 0.0011 30.2 4.7 111 63-177 11-135 (339)
349 1bpo_A Protein (clathrin); cla 40.6 2.2E+02 0.0075 26.1 30.4 201 104-323 72-291 (494)
350 1bpo_A Protein (clathrin); cla 40.5 2.2E+02 0.0075 26.1 22.3 120 98-220 151-292 (494)
351 4gq2_M Nucleoporin NUP120; bet 39.9 55 0.0019 33.3 7.0 35 99-133 237-271 (950)
352 3f7f_A Nucleoporin NUP120; nuc 38.2 1.8E+02 0.0061 28.4 9.8 36 100-137 224-259 (729)
353 3sbq_A Nitrous-oxide reductase 35.9 62 0.0021 30.6 6.0 109 52-161 324-454 (638)
354 4a9v_A PHOX; hydrolase, beta-p 34.8 1.8E+02 0.0061 27.5 9.0 60 99-159 477-548 (592)
355 4fhn_B Nucleoporin NUP120; pro 31.3 51 0.0017 34.3 5.2 35 99-133 239-273 (1139)
356 3s25_A Hypothetical 7-bladed b 29.1 2.6E+02 0.0089 23.6 15.8 125 104-251 110-241 (302)
357 1zso_A Hypothetical protein; s 26.0 2.2E+02 0.0076 21.7 7.7 51 188-240 111-161 (164)
358 4fhn_B Nucleoporin NUP120; pro 25.3 59 0.002 33.8 4.5 32 143-174 239-270 (1139)
359 1sqj_A OXG-RCBH, oligoxylogluc 24.8 5E+02 0.017 25.4 16.8 154 97-253 14-190 (789)
360 3s25_A Hypothetical 7-bladed b 24.7 3.2E+02 0.011 23.1 16.5 134 104-260 59-211 (302)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-53 Score=387.77 Aligned_cols=329 Identities=60% Similarity=1.166 Sum_probs=275.5
Q ss_pred ccccccccC-CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQG-RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~-~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++.+|.+ .|++++|+|+|++||+|+.|++|++|+.+. ...........+|...|.+++|+|++++|++|+.|+.+
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEG--DSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEET--TEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCC--CcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 457889987 999999999999999999999999999873 22222333446899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||...+...+...+.+|..+|.+++|+|++++|++|+.|++|++||++......+...+..|...|.+++|+|++++|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 99999888777778899999999999999999999999999999999998877666777788999999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.|+.|++|+.+... +.....+.+|...|++++|+|+|.+|++++.|++|++|+...++....+........+.|
T Consensus 166 ~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 999999999999986543 233467789999999999999999999999999999999876655544443334556788
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
..++.+.|...|++++|++.+..|++++.|+.+++|+........ ...+.+......+|...|++|+|+|.++.+||||
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ-QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT-SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEE
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc-eeeEEEEeeecccccCcEeEeEEeCCCceEEEEc
Confidence 889988778899999999999999999999999999976543211 1122222333468999999999999766689999
Q ss_pred eCCCcEEEEecccCC
Q psy18091 362 SDDGDVKLWQIKLEN 376 (377)
Q Consensus 362 s~Dg~i~iWd~~~~~ 376 (377)
|.||+|+||+++.++
T Consensus 323 s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 323 SDDGEVAFWKYQRPE 337 (345)
T ss_dssp ETTSCEEEEEECC--
T ss_pred CCCCcEEEEEecCCC
Confidence 999999999998764
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-47 Score=354.57 Aligned_cols=290 Identities=27% Similarity=0.454 Sum_probs=247.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.++|++++|+|++++|++|+.|++|++||..+.... ....+|...|.+++|+|++++|++|+.|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-----~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-----RTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-----EEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-----EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3468899999999999999999999999999999998753211 12357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||+.+++ +...+.+|...|.+++|+|+++++++|+.|++|++||+++.. +...+..|...+..+.++|++.+++
T Consensus 176 iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 176 LWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp EEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEeCCCccEEEEEECCCCCEEE
Confidence 99998775 345678999999999999999999999999999999998764 4456778999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--------------------CCeEEEeeCCCcEEEEeee
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--------------------GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--------------------~~~l~s~s~D~~i~iw~~~ 262 (377)
+|+.|+.|++||+..... ...+..|...|.+++|+|+ +.+|++|+.|++|++||+.
T Consensus 251 s~s~D~~v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~ 326 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326 (410)
T ss_dssp EEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETT
T ss_pred EEcCCCeEEEEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999876543 4567889999999999996 6689999999999999964
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
. ..+...+.+| ...|.++.|+|++.+|++++.|+.|++|+...... + ....+|.
T Consensus 327 ~---------------~~~~~~~~~h-~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~---------~-~~~~~h~ 380 (410)
T 1vyh_C 327 T---------------GMCLMTLVGH-DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC---------M-KTLNAHE 380 (410)
T ss_dssp T---------------TEEEEEEECC-SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC---------C-EEEECCS
T ss_pred C---------------CceEEEEECC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---------E-EEEcCCC
Confidence 2 2456677776 45899999999999999999999999998754331 1 1235789
Q ss_pred cceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 343 QDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 343 ~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
..|++++|+|. +.+|+|||.||+|+||+++
T Consensus 381 ~~v~~l~~~~~-~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 381 HFVTSLDFHKT-APYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SCEEEEEECSS-SSCEEEEETTSEEEEEC--
T ss_pred CcEEEEEEcCC-CCEEEEEeCCCcEEEEeCC
Confidence 99999999995 6689999999999999975
No 3
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-46 Score=340.13 Aligned_cols=311 Identities=37% Similarity=0.738 Sum_probs=241.3
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc-CcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG-HQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+|++|+++|++++|+|+ +|++|+.|++|++|++... .......+..+ |...|.+++|+|++++|++|+.|+.|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~--~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYD--DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSS--CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCC--CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4568999999999999987 9999999999999998632 12222223234 99999999999999999999999999
Q ss_pred EEEeCCCC-----ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC-CceeEEEEeeccccceeEEEEe
Q psy18091 122 AVWDKRSG-----QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 122 ~iwd~~~~-----~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
++||...+ .......+.+|...|.+++|+|++++|++|+.|++|++||++.. ....+...+..|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 99998532 22445678899999999999999999999999999999999543 3345566778899999999999
Q ss_pred eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--CCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 196 PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--GSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 196 ~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
|++.+|++|+.|+.|++|+..... +.....+.+|...|++++|+|+ +.+|++++.|++|++|++......
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~------ 234 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDD--WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED------ 234 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT------
T ss_pred CCCCEEEEEcCCCeEEEEECCCCC--eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc------
Confidence 999999999999999999976432 2345678899999999999998 678999999999999997643211
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceec-ceeEEEecC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-DVNCVAWNP 352 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~p 352 (377)
....+.+...+.+.|...|+.++|++. .+|++++.||.+++|+..... +........+|.. .|++++|+|
T Consensus 235 -~~~~~~~~~~~~~~h~~~v~~v~~s~~-~~l~s~~~dg~v~iw~~~~~~-------~~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 235 -DQQEWVCEAILPDVHKRQVYNVAWGFN-GLIASVGADGVLAVYEEVDGE-------WKVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp -SCEEEEEEEECCSCCSSCEEEEEECTT-SCEEEEETTSCEEEEEEETTE-------EEEEEEESCTTTTSCEEEEEEC-
T ss_pred -ccceeEEeeecccccccceEEEEEcCC-CEEEEEeCCCEEEEEEcCCCc-------eEEEeccccccccceEEEEEEec
Confidence 122345666666656679999999964 589999999999999865321 1112222346776 899999999
Q ss_pred C-CCceEEEeeCCCcEEEEeccc
Q psy18091 353 V-VPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 353 ~-~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. ++.+|||||.||+|+|||++.
T Consensus 306 ~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 306 LNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ----CCEEEEETTSEEEEEEC--
T ss_pred CCCceEEEEecCCCcEEEEEecc
Confidence 4 466899999999999999875
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-46 Score=336.29 Aligned_cols=291 Identities=20% Similarity=0.371 Sum_probs=244.0
Q ss_pred cccccccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
+.+++|.+.|++++|+|+ +.+|+||+.|++|++|+... ...... ....+|...|.+++|+|++.++++++.|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~--~~~~~~-~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--ERLDLQ-WSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEET--TEEEEE-EEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCC--CCeeee-eeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 356899999999999985 67999999999999999863 121111 12468999999999999999999999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
.|++||+.+++. ...+..|...+.+++|+|++++|++++.|+.|++||++..... ..+..|...+.+++|+|+++
T Consensus 103 ~i~lWd~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~---~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 103 HIRLWDLENGKQ--IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE---YSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp EEEEEETTTTEE--EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE---EEEECSSSCEEEEEECTTSS
T ss_pred cEEEEECCCCCE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee---EEecCCCceEEEEEECCCCC
Confidence 999999998854 4556778889999999999999999999999999999877533 34567788899999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+|++|+.||.|++||++..+. +..+.+|...|.+++|+|++.+|++++.|++|++||+...
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------------- 238 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------------- 238 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC---------------
T ss_pred EEEEEcCCCeEEEEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc---------------
Confidence 999999999999999876543 4567889999999999999999999999999999996422
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.+...+.+| ...|..++|+|++.+|++++.|+++++|+..... ++ ....+|...|.+++|+| ++..|+
T Consensus 239 ~~~~~~~~h-~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~---------~~-~~~~~h~~~v~~v~~s~-~g~~l~ 306 (321)
T 3ow8_A 239 NLAGTLSGH-ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT---------CV-HTFFDHQDQVWGVKYNG-NGSKIV 306 (321)
T ss_dssp CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EE-EEECCCSSCEEEEEECT-TSSEEE
T ss_pred ceeEEEcCC-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---------EE-EEEcCCCCcEEEEEECC-CCCEEE
Confidence 234566665 4589999999999999999999999999875432 12 22357899999999999 467899
Q ss_pred EeeCCCcEEEEecc
Q psy18091 360 SCSDDGDVKLWQIK 373 (377)
Q Consensus 360 S~s~Dg~i~iWd~~ 373 (377)
|+|.||+|+|||+.
T Consensus 307 s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 307 SVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTCCEEEEECC
T ss_pred EEeCCCeEEEEeCC
Confidence 99999999999975
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.1e-46 Score=337.04 Aligned_cols=291 Identities=19% Similarity=0.345 Sum_probs=242.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+|++|.+.|++++|+|++++|++|+.|++|++||..+.. . ......|...|.+++|+|++++|++|+.|+.+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~--~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN--K---VHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--E---EEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC--c---ceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 345789999999999999999999999999999999986421 1 11224688899999999999999999999999
Q ss_pred EEEeCCCCc--eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 122 AVWDKRSGQ--FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 122 ~iwd~~~~~--~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++|++.++. ......+.+|.+.|.++.|++++. +++++.|++|++||+++.. +...+..|...|.+++|+|+++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ---QTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc---EEEEEcCCCCceEEEEECCCCC
Confidence 999987653 344566789999999999998775 8999999999999998763 3456778999999999999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
++++|+.|+.|++||++.... ...+.+|...|++++|+|++.+|++++.|++|++||+....
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~-------------- 259 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ-------------- 259 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------
T ss_pred EEEEEeCCCcEEEEECCCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc--------------
Confidence 999999999999999876543 45678899999999999999999999999999999964321
Q ss_pred EEEEeecC-CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 280 KCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 280 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
....+.. .+...|..++|+|++.+|++|+.|+.+++|+...... + ....+|..+|++++|+| ++.+|
T Consensus 260 -~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~---------~-~~~~~h~~~v~~~~~s~-dg~~l 327 (340)
T 1got_B 260 -ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR---------A-GVLAGHDNRVSCLGVTD-DGMAV 327 (340)
T ss_dssp -EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------E-EEEECCSSCEEEEEECT-TSSCE
T ss_pred -EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE---------e-eEeecCCCcEEEEEEcC-CCCEE
Confidence 1222221 1234689999999999999999999999998754321 1 12358999999999999 56789
Q ss_pred EEeeCCCcEEEEe
Q psy18091 359 ASCSDDGDVKLWQ 371 (377)
Q Consensus 359 aS~s~Dg~i~iWd 371 (377)
||||.||+|+|||
T Consensus 328 ~s~s~D~~i~iWd 340 (340)
T 1got_B 328 ATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEcCCccEEecC
Confidence 9999999999997
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.5e-45 Score=330.23 Aligned_cols=300 Identities=24% Similarity=0.393 Sum_probs=241.3
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+|+||++.|++++|+|++ ++|+||+.|++|++|++...............+|...|.+++|+|++++|++|+.|+.|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 4789999999999999965 899999999999999986422222222223458999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC----
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD---- 198 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---- 198 (377)
+||+.+++. ...+.+|...|.+++|+|++.++++|+.|++|++||++.. +...+..|...+.++.++|.+
T Consensus 91 ~wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 91 LWDVATGET--YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC----EEEEECCCSSCEEEEEECCC-----
T ss_pred EEECCCCCe--eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eEEEEeccCCcEEEEEEccCCCCCC
Confidence 999998854 4667899999999999999999999999999999999753 345567899999999999854
Q ss_pred --cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 199 --NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 199 --~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
..+++++.|+.|++||++..+. ...+.+|...|++++|+|++.+|++++.|++|++||+...
T Consensus 165 ~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~------------ 228 (319)
T 3frx_A 165 DSVTIISAGNDKMVKAWNLNQFQI----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK------------ 228 (319)
T ss_dssp -CCEEEEEETTSCEEEEETTTTEE----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT------------
T ss_pred CccEEEEEeCCCEEEEEECCcchh----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC------------
Confidence 4899999999999999875442 4567789999999999999999999999999999996422
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee-eeeccccceecceeEEEecCCCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD-LVHTEHRAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~ 355 (377)
.+...+..+ ..|..++|+|++.++++++.+ .+++|+....... .... ........|...+.+++|+| ++
T Consensus 229 ---~~~~~~~~~--~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~sp-dg 298 (319)
T 3frx_A 229 ---KAMYTLSAQ--DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLV---DDLRPEFAGYSKAAEPHAVSLAWSA-DG 298 (319)
T ss_dssp ---EEEEEEECC--SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEE---EEECCCCTTCCGGGCCCEEEEEECT-TS
T ss_pred ---cEEEEecCC--CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeee---eccCccccccccCcCcceeEEEECC-CC
Confidence 234455443 479999999999998887754 5999987543210 0000 00011234677899999999 57
Q ss_pred ceEEEeeCCCcEEEEecccC
Q psy18091 356 GMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+|++|+.||.|+|||+.+.
T Consensus 299 ~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 299 QTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SEEEEEETTSCEEEEEEEEC
T ss_pred CEEEEeecCceEEEEEEeec
Confidence 78999999999999999865
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=333.93 Aligned_cols=298 Identities=15% Similarity=0.225 Sum_probs=230.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccC--C----CcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESF--G----NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~--~----~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
...|.+.|.+++|+|||++|++++ |+++|+||.... . ............|...|.+++|+|++ .|++|+.||
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg 103 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG 103 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence 345778899999999999999888 788999974210 0 00000111112356789999999984 688999999
Q ss_pred cEEEEeCCCCceE--EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 120 TTAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 120 ~i~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
.|+|||+.+++.. ....+.+|.+.|.+++|+|++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~---~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ---VVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECSS
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCcCCceEEEEecCC
Confidence 9999999887643 23345689999999999999999999999999999999876 345667899999999999998
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+ .+|++++.|+.|++||++..+.. .......|...+.+++|+|+ +.+|++|+.|++|++||+...
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~----------- 247 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST----------- 247 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC------------
T ss_pred CCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC-----------
Confidence 8 57899999999999999865532 11223456667999999996 467899999999999997532
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
.++..+.+| ...|+.++|+|++ .+|++++.|++|++|+....+ +. . ..+|...|++|+|+|.+
T Consensus 248 ----~~~~~~~~h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---------~~-~-~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 248 ----SCVLSSAVH-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---------LF-R-SQAHRDFVRDATWSPLN 311 (344)
T ss_dssp -----CCEEEECC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---------EE-E-ECCCSSCEEEEEECSSS
T ss_pred ----cEEEEEcCC-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---------EE-E-EcCCCCCEEEEEEeCCC
Confidence 234566675 4589999999987 589999999999999865432 11 1 35899999999999977
Q ss_pred CceEEEeeCCCcEEEEecccCCC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLENL 377 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~~~ 377 (377)
..+|+|||.||+|++|++..+.+
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEEcCCCeEEEEECCCCCC
Confidence 77889999999999999987753
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.7e-45 Score=333.15 Aligned_cols=292 Identities=19% Similarity=0.270 Sum_probs=241.0
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+|+||.+.|++++|+|++++|+||+.|++|++||..+.. .. .....|...|.+++|+|++++|++++.|+.+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~--~~---~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--KE---HAVTMPCTWVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EE---EEEECSSSCCCEEEECTTSSEEEEESTTSEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--cc---eEEecCCCCEEEEEECCCCCEEEEeeCCCCE
Confidence 445799999999999999999999999999999999976421 11 1123578889999999999999999999999
Q ss_pred EEEeCCCCc----eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 122 AVWDKRSGQ----FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 122 ~iwd~~~~~----~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
++|++.... ......+.+|.+.|.+++|+|++..+++++.|++|++||+++.. +...+..|...+.+++++|.
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~---~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ---LLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECCC
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEcCCCCCeEEEEEEeC
Confidence 999986431 12234567899999999999999999999999999999998764 34567789999999999884
Q ss_pred --CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 --DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 --~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+++|++|+.||.|++||++.... ...+..|...|++++|+|++.+|++++.|++|++||+...
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~----------- 272 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD----------- 272 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT-----------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-----------
Confidence 68999999999999999986543 4567889999999999999999999999999999997432
Q ss_pred CCcEEEEEeecCC-CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
.....+..+ ....+..++|+|++.+|++++.|+.+++|+..... .+ ....+|..+|++++|+| +
T Consensus 273 ----~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---------~~-~~l~~h~~~v~~l~~sp-d 337 (354)
T 2pbi_B 273 ----REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS---------RV-SILFGHENRVSTLRVSP-D 337 (354)
T ss_dssp ----EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---------EE-EEECCCSSCEEEEEECT-T
T ss_pred ----cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc---------eE-EEEECCCCcEEEEEECC-C
Confidence 112222221 23468899999999999999999999999875432 11 12357999999999999 5
Q ss_pred CceEEEeeCCCcEEEEe
Q psy18091 355 PGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd 371 (377)
+.+|||||.||+|+||+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 67899999999999996
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.7e-46 Score=343.52 Aligned_cols=303 Identities=20% Similarity=0.327 Sum_probs=242.5
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+|+||.+.|++++|+|++++|+||+.|++|++||..+. .. ......|...|.+++|+|++++|++|+.|+.++
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~--~~---~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~ 133 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS--QK---THAIKLHCPWVMECAFAPNGQSVACGGLDSACS 133 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EE---EEEEECCCTTCCCCEECTTSSEEEECCSSSCCE
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cc---ceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE
Confidence 3578999999999999999999999999999999998642 11 112347889999999999999999999999999
Q ss_pred EEeCCCCc-----eEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEE--EeeccccceeEEEE
Q psy18091 123 VWDKRSGQ-----FECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAA--VINAHIQDVKKVRF 194 (377)
Q Consensus 123 iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~--~~~~~~~~v~~~~~ 194 (377)
+||+.+.. ......+.+|.+.|.++.|.|++ ..|++|+.|++|++||+++........ ....|...+.++.+
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI 213 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence 99986432 22234577899999999999974 579999999999999998875432210 11468889999999
Q ss_pred ee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCC
Q psy18091 195 HP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 195 ~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
+| +++++++|+.|+.|++||++.... ....+.+|...|++++|+|++.+|++++.|++|++||+....
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~-------- 282 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSR---AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH-------- 282 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCC---CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCc---ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------
Confidence 87 789999999999999999874332 245678899999999999999999999999999999975321
Q ss_pred CCCCcEEEEEeecCC------CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 274 DNDSVWKCVCTLSGH------HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
+...+..+ +...|..++|+|++.+|++|+.||.+++|+....+. .. .+.....+|...|++
T Consensus 283 -------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~-----~~-~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 283 -------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM-----VL-NLGTLQNSHEGRISC 349 (380)
T ss_dssp -------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE-----EE-EECCSCSSCCCCCCE
T ss_pred -------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce-----EE-EEecccCCCCCceEE
Confidence 12222221 123488999999999999999999999998754331 00 112223579999999
Q ss_pred EEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 348 VAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 348 v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
++|+| ++.+|+|||.||+|+||++...
T Consensus 350 l~~s~-dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 350 LGLSS-DGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEECS-SSSEEEEECTTSCEEEEECCSS
T ss_pred EEECC-CCCEEEEeeCCCCEEEEecCCC
Confidence 99999 5778999999999999999864
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.8e-45 Score=333.91 Aligned_cols=296 Identities=16% Similarity=0.216 Sum_probs=228.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeC------CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGE------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
...|++.|++++|+|||++|+||+. |++|++|+........... ....+|...|.+++|+|+++ +++++.|+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~-~~~~~~~~~V~~~~~s~d~~-~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLC-TAGVQTEAGVTDVAWVSEKG-ILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGC-SEEEECSSCEEEEEEETTTE-EEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEe-cccCCCCCCEEEEEEcCCCC-EEEEECCC
Confidence 4679999999999999999999998 6788899765432222111 12246888999999999976 45678899
Q ss_pred cEEEEeCCCCceEE--eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 120 TTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 120 ~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
.|+|||+.+++... .....+|.+.|.+++|+|++++|++|+.|+.|++||+++.. +...+..|...|.+++|+|+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~---~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA---VLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCCCEEEEEEccC
Confidence 99999998775332 23456899999999999999999999999999999998763 44567889999999999998
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+ .++++++.||.|++||++..+.. .......|...+.+++|+|++ .+|++|+.|+.|++||+....
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~---------- 260 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD---------- 260 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG----------
T ss_pred CCceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCc----------
Confidence 7 47899999999999998765532 223345677889999999985 578899999999999975332
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+...+.+| ...|+.++|+|++ .+|++++.|++|++|+....+ ++. ..+|...|++|+|+|.+
T Consensus 261 -----~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---------~~~--~~~H~~~V~~vafsP~d 323 (357)
T 4g56_B 261 -----SAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---------VFR--DLSHRDFVTGVAWSPLD 323 (357)
T ss_dssp -----GCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---------EEE--ECCCSSCEEEEEECSSS
T ss_pred -----EeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---------EeE--ECCCCCCEEEEEEeCCC
Confidence 12445554 4589999999986 589999999999999865432 121 13799999999999977
Q ss_pred CceEEEeeCCCcEEEEecccC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.+|||||.||+|++|++..+
T Consensus 324 ~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 324 HSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TTEEEEEETTSCEEEEECC--
T ss_pred CCEEEEEcCCCeEEEEECCCC
Confidence 889999999999999999764
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-44 Score=322.59 Aligned_cols=295 Identities=20% Similarity=0.287 Sum_probs=241.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..++|++|.+.|++++|+|++++|++|+.||+|++||.++. . .. .....|...|.+++|+|++++|++|+.|+.|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~--~-~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ--V-EV--RSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--E-EE--EEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCC--c-ee--EEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 34578999999999999999999999999999999998742 1 11 1224688899999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++|+.|++|++||++.... ....+..|...|.+++|+| ++..
T Consensus 80 ~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA--LEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE--EEEEECCCCSCEEEEEECTTCTTE
T ss_pred EEEECCCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc--hhhhhcccCCcEEEEEECCCCCCE
Confidence 9999998864 456789999999999999999999999999999999986543 3455778999999999999 5689
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
|++|+.|+.|++||++..... ......|...+..+.|.| ++.+|++++.|++|++||+..
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~--------------- 217 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------------- 217 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT---------------
T ss_pred EEEEeCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC---------------
Confidence 999999999999998755432 222345677899999986 678999999999999999642
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc-e
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG-M 357 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~ 357 (377)
..+..++.+|. ..|..+.|+|++.+|++++.|++|++|+....+ +. .....|...+.+++|+|.++. +
T Consensus 218 ~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~ 286 (304)
T 2ynn_A 218 KSCVATLEGHM-SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---------VE-KTLNVGLERSWCIATHPTGRKNY 286 (304)
T ss_dssp TEEEEEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---------EE-EEECCSSSSEEEEEECTTCGGGC
T ss_pred CccceeeCCCC-CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------ee-eeccCCCccEEEEEECCCCCceE
Confidence 24567777764 589999999999999999999999999876543 11 223467889999999996544 5
Q ss_pred EEEeeCCCcEEEEecccC
Q psy18091 358 LASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 358 laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|++|| +.+|++..+
T Consensus 287 ~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 287 IASGFDNG-FTVLSLGND 303 (304)
T ss_dssp EEEEETTE-EEEEECC--
T ss_pred EEEecCCc-eEEEEeccC
Confidence 78877766 777777543
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.3e-44 Score=324.83 Aligned_cols=305 Identities=22% Similarity=0.358 Sum_probs=236.8
Q ss_pred ccccccccCCEEEEEE-----CC-CCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCCCCEEEE
Q psy18091 43 SQTLKGHQGRVWNVSW-----NP-QGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~-----~~-~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~~~~l~s 114 (377)
...|+||++.|++++| ++ ++++|+||+.|++|++||+...... .........+|...|.+++|+|++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3578999999999999 76 8999999999999999998642211 11111234689999999999999999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
++.|+.|++||+.+++. ...+.+|...|.+++|+|+++++++++.|++|++||+...... .......|...+.+++|
T Consensus 94 ~s~D~~v~lwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTT--YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-SSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EETTSEEEEEETTSSCE--EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-ECCTTTSCSSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcE--EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-eeecccCCCceeeeeee
Confidence 99999999999998864 4567899999999999999999999999999999999743211 11111267788999999
Q ss_pred eeCC----------cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 195 HPFD----------NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 195 ~~~~----------~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
+|.+ .++++++.||.|++||.... ....+.+|...|.+++|+|+|++|++|+.|+.|++||+...
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-----~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~ 245 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-----IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL 245 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE-----EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCCc-----eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9986 78999999999999995321 23567789999999999999999999999999999997432
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee--e--eeccccc
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD--L--VHTEHRA 340 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~--~--~~~~~~~ 340 (377)
... ...+. ++..|..++|+|++.++++ +.|+.+++|+........ ..... . ......+
T Consensus 246 ~~~--------------~~~~~--~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 246 TYP--------------QREFD--AGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAP-VCTIEAEPITKAEGQKG 307 (343)
T ss_dssp SSC--------------SEEEE--CSSCEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCS-EEECCCCSGGGBTTBCC
T ss_pred ccc--------------ceeec--CCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCc-eEEeecCcchhhhhhcC
Confidence 211 01111 2346999999999887764 568889999976543221 00000 0 0011237
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
|...|++++|+|. +..|++|+.||+|++|+++.
T Consensus 308 ~~~~v~~~~~sp~-g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 308 KNPQCTSLAWNAL-GKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SCCCEEEEEECSS-SCCEEEEETTSEEEEEEEEE
T ss_pred CCCceEEEEECCC-CCeEEEecCCceEEEEEEEc
Confidence 8889999999995 67899999999999999875
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.6e-43 Score=341.33 Aligned_cols=304 Identities=21% Similarity=0.307 Sum_probs=235.3
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccce--eeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAK--AILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
..++.+|.+.|++++|+|+|++|++|+.|++|++||..+........ .....+|...|.+++|+|++++|++++.|++
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 262 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe
Confidence 35688999999999999999999999999999999976421110000 0001179999999999999999999999999
Q ss_pred EEEEeCCCCceEE-----------------------------------------eEEecCccCCEEEEEEcCCCCEEEEE
Q psy18091 121 TAVWDKRSGQFEC-----------------------------------------NATLEGHENEVKSVTWSKNGQFLATC 159 (377)
Q Consensus 121 i~iwd~~~~~~~~-----------------------------------------~~~~~~h~~~v~~l~~~~~~~~l~s~ 159 (377)
|++||+.+++... ...+.+|...|.+++|+|++++|+++
T Consensus 263 v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 263 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342 (611)
T ss_dssp EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 9999998765321 23456899999999999999999999
Q ss_pred ECCCcEEEEEcCCCCceeE-----------E-----------------EEe-----------------------------
Q psy18091 160 SRDKSVWVWEVGEEDEYEC-----------A-----------------AVI----------------------------- 182 (377)
Q Consensus 160 ~~dg~v~~wd~~~~~~~~~-----------~-----------------~~~----------------------------- 182 (377)
+.|++|++||+.+...... . ...
T Consensus 343 s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 422 (611)
T 1nr0_A 343 DAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD 422 (611)
T ss_dssp ETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCC
Confidence 9999999999865321100 0 000
Q ss_pred ----------------------eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE
Q psy18091 183 ----------------------NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240 (377)
Q Consensus 183 ----------------------~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 240 (377)
..|...+.+++|+|+++++++|+.|+.|++|++..... ..... ..|...|++++|
T Consensus 423 g~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~--~~~~~-~~h~~~v~~v~f 499 (611)
T 1nr0_A 423 GDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV--SEVKT-IVHPAEITSVAF 499 (611)
T ss_dssp SSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE--EEEEE-EECSSCEEEEEE
T ss_pred CcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce--eeeec-cCCCCceEEEEE
Confidence 01234567899999999999999999999999865332 11223 679999999999
Q ss_pred cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEe-ecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 241 DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCT-LSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 241 ~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+|+|++|++++.|++|++|+.....+. ... ..+.|...|++++|+|++++|++++.|++|++|+.
T Consensus 500 spdg~~las~s~d~~v~~w~~~~~~~~--------------~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 500 SNNGAFLVATDQSRKVIPYSVANNFEL--------------AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEEGGGTTEE--------------SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEcCCCCEEEEEcCCCCce--------------eeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 999999999999999999997542211 111 12224568999999999999999999999999997
Q ss_pred CCCCCCCcceeeeeeeccccce-ecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 320 NPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...... ......+| ...|++++|+| ++. |+|||.||+|++|++.
T Consensus 566 ~~~~~~--------~~~~~~~h~~~~v~~v~fs~-d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 566 NKPSDH--------PIIIKGAHAMSSVNSVIWLN-ETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TCTTSC--------CEEETTSSTTSCEEEEEEEE-TTE-EEEEETTSCEEEEECC
T ss_pred CCcccc--------cchhhccCcccCeeEEEEcC-CCE-EEEecCCCCEEEEecc
Confidence 643311 10123578 78999999999 465 9999999999999985
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.6e-42 Score=309.16 Aligned_cols=291 Identities=28% Similarity=0.479 Sum_probs=237.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.++.+|.+.|++++|+|++++|++|+.|++|++|+.... .. . ....+|...|.+++|+|++++|++++.|+.|++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~--~~--~-~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KF--E-KTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--CE--E-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCc--cc--c-hhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 468999999999999999999999999999999998632 11 1 123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++. ...+.+|...|.+++|+|+++++++|+.|+.|++||+++.. +...+..|...+.++.|+|+++++++
T Consensus 92 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 92 WDVSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK---CLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE---EEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 99998764 45678899999999999999999999999999999998764 34456788899999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
++.||.|++||++..+.. ......+...+..++|+|++.+|++++.|+.|++||+... .+..
T Consensus 167 ~~~d~~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------------~~~~ 228 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG---------------KCLK 228 (312)
T ss_dssp EETTSCEEEEETTTCCEE---EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT---------------EEEE
T ss_pred EeCCCcEEEEECCCCcee---eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---------------cEEE
Confidence 999999999998765431 1223456778999999999999999999999999996432 3345
Q ss_pred eecCCCCcc--eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe
Q psy18091 284 TLSGHHGRT--IYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 284 ~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~ 361 (377)
.+.+|.... +......+.+.++++++.||.|++|+....+ ......+|...|.+++|+|. +.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------~~~~~~~h~~~v~~~~~~p~-~~~l~s~ 297 (312)
T 4ery_A 229 TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------IVQKLQGHTDVVISTACHPT-ENIIASA 297 (312)
T ss_dssp EECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC----------EEEEECCCSSCEEEEEECSS-SSEEEEE
T ss_pred EEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch----------hhhhhhccCCcEEEEeecCc-CCceEEE
Confidence 555554321 2222233567799999999999999876543 12234689999999999995 5688888
Q ss_pred e--CCCcEEEEecc
Q psy18091 362 S--DDGDVKLWQIK 373 (377)
Q Consensus 362 s--~Dg~i~iWd~~ 373 (377)
+ .|++|++|+..
T Consensus 298 ~~~~d~~i~~W~~d 311 (312)
T 4ery_A 298 ALENDKTIKLWKSD 311 (312)
T ss_dssp ECTTTCCEEEEECC
T ss_pred EccCCccEEEecCC
Confidence 7 69999999864
No 15
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-42 Score=313.71 Aligned_cols=305 Identities=25% Similarity=0.387 Sum_probs=238.5
Q ss_pred cccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
.+|+||++.|++|+|+|+ +++|+|||.|++|++||+...............+|...|.+++|+|++++|++++.|+.++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~ 111 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR 111 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence 479999999999999997 6899999999999999987533222222223468999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--cE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 200 (377)
+|+...+... .....+...+....++++++++++++.|+.+++||+...... ......|...+..++|++++ .+
T Consensus 112 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 112 LWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY--TVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE--EECSSSCSSCEEEEEECSCSSSCE
T ss_pred EEeeccccee--eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE--EEEeccccCcccceEEccCCCCcE
Confidence 9999877543 445567788999999999999999999999999998765322 23456788899999998764 57
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++++.|+.|++|+.+.... ...+.+|...|++++|+|++++|++|+.|+.|++||+... .
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~---------------~ 248 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKL----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG---------------K 248 (340)
T ss_dssp EEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT---------------E
T ss_pred EEEEcCCCEEEEEECCCCce----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC---------------c
Confidence 89999999999999886543 4567889999999999999999999999999999996422 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
++..+.+ ...+..+.|+|.+. +++++.|+.+++|+......... ...........+|...|++++|+| ++.+|+|
T Consensus 249 ~~~~~~~--~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s 323 (340)
T 4aow_A 249 HLYTLDG--GDIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDE-LKQEVISTSSKAEPPQCTSLAWSA-DGQTLFA 323 (340)
T ss_dssp EEEEEEC--SSCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEE-ECCC-------CCCCCEEEEEECT-TSSEEEE
T ss_pred eeeeecC--CceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEe-ccccceeeeccCCCCCEEEEEECC-CCCEEEE
Confidence 3444444 34789999998655 55667899999998754321000 000011122357899999999999 5678999
Q ss_pred eeCCCcEEEEecccCC
Q psy18091 361 CSDDGDVKLWQIKLEN 376 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~~ 376 (377)
|+.||.|+|||+++.+
T Consensus 324 gs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 324 GYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTSCEEEEEEEC--
T ss_pred EeCCCEEEEEeCCCcC
Confidence 9999999999998754
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-42 Score=338.93 Aligned_cols=301 Identities=20% Similarity=0.299 Sum_probs=237.3
Q ss_pred ccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...+.+|.+.|++++|+|++. +|++|+.|++|++||..+. .... ...+|...|.+++|+|++++|++++.|+.|
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~----~~~~-~l~~H~~~V~~v~fspdg~~las~s~D~~i 214 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF----KFKS-TFGEHTKFVHSVRYNPDGSLFASTGGDGTI 214 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB----EEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC----eEee-eeccccCceEEEEECCCCCEEEEEECCCcE
Confidence 346899999999999999987 6999999999999997531 1111 235899999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEec-------CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-----------------
Q psy18091 122 AVWDKRSGQFECNATLE-------GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----------------- 177 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----------------- 177 (377)
++||..+++.. ..+. +|.+.|.+++|+|++++|++++.|++|++||+.+.....
T Consensus 215 ~lwd~~~g~~~--~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 215 VLYNGVDGTKT--GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EEEETTTCCEE--EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred EEEECCCCcEe--eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 99999887643 3342 799999999999999999999999999999997653221
Q ss_pred -----------------------EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccccee----------
Q psy18091 178 -----------------------CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWIN---------- 224 (377)
Q Consensus 178 -----------------------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~---------- 224 (377)
+...+.+|...|.+++|+|++++|++++.|+.|++||+.........
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~ 372 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 372 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEE
Confidence 12234578889999999999999999999999999997643210000
Q ss_pred --------e---------e-----------------e----------------------------------cccCCcceE
Q psy18091 225 --------F---------A-----------------T----------------------------------LKSHTSTVW 236 (377)
Q Consensus 225 --------~---------~-----------------~----------------------------------~~~h~~~v~ 236 (377)
+ . . ...|...+.
T Consensus 373 ~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~ 452 (611)
T 1nr0_A 373 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSS 452 (611)
T ss_dssp EEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEE
T ss_pred EEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCce
Confidence 0 0 0 001345678
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
+++|+|+|++|++|+.|++|++|++... ....... .+ |...|.+++|+|++++|++++.|+++++
T Consensus 453 ~va~spdg~~lasgs~D~~v~lwd~~~~-------------~~~~~~~-~~-h~~~v~~v~fspdg~~las~s~d~~v~~ 517 (611)
T 1nr0_A 453 CVALSNDKQFVAVGGQDSKVHVYKLSGA-------------SVSEVKT-IV-HPAEITSVAFSNNGAFLVATDQSRKVIP 517 (611)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEEETT-------------EEEEEEE-EE-CSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEeCCCCEEEEeCCCCeEEEEEccCC-------------ceeeeec-cC-CCCceEEEEECCCCCEEEEEcCCCCEEE
Confidence 9999999999999999999999997431 1112223 34 3568999999999999999999999999
Q ss_pred EEeCCCCCCCcceeeeeeec-cccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 317 FKENPEAGDSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
|+..... .+... ...+|...|++++|+| ++.+|||||.|++|+|||+..
T Consensus 518 w~~~~~~--------~~~~~~~~~~H~~~V~~v~fsp-dg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 518 YSVANNF--------ELAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp EEGGGTT--------EESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTC
T ss_pred EEcCCCC--------ceeeeeeeeecccceeEEEECC-CCCEEEEEECCCcEEEEECCC
Confidence 9875421 01111 2345999999999999 577999999999999999975
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5e-42 Score=318.53 Aligned_cols=307 Identities=20% Similarity=0.315 Sum_probs=233.2
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee-------------eeccCcCceeEEEECCCCCEEEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------------~~~~h~~~V~~~~~~~~~~~l~s 114 (377)
+|.+.|++++|+|+|++||+|+ |+++++|+..+.......... ....+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 689999998642111000000 00012234899999999999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|+.|+.|++||+.+++. ...+.+|...|.+++|+|++++|++++.|++|++||+++.... ..+ .+...+..+++
T Consensus 141 ~~~d~~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~---~~~-~~~~~v~~~~~ 214 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKI--VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS---LTL-SIEDGVTTVAV 214 (393)
T ss_dssp EETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEE-ECSSCEEEEEE
T ss_pred EcCCCeEEEEECCCCcE--EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE---EEE-EcCCCcEEEEE
Confidence 99999999999988754 4568899999999999999999999999999999999876432 222 24567999999
Q ss_pred ee-CCcEEEEeeCCCcEEEEecCcccccce---eeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 195 HP-FDNILASASYDDTVKLFKEDKAEADWI---NFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 195 ~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+| ++.++++|+.|+.|++||.+....... ......+|...|++++|+|++.+|++++.|++|++||+.........
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 99 789999999999999999875432100 00122579999999999999999999999999999997654322111
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
.. .....|...+.+|. ..|..++|++++.+|++++.|+.+++|+...... + ....+|...|.+++|
T Consensus 295 ~~---~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~---------~-~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 295 KT---PNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP---------L-LMLQGHRNSVISVAV 360 (393)
T ss_dssp ---------CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE---------E-EEEECCSSCEEEEEE
T ss_pred cC---CCCCcceEEEeccc-CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE---------E-EEECCCCCCEEEEEe
Confidence 11 11234556677764 5899999999999999999999999998765431 1 123579999999999
Q ss_pred cCC-----CCceEEEeeCCCcEEEEecccC
Q psy18091 351 NPV-----VPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 351 ~p~-----~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|. ++.+|||||.||+|+||+++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 863 3568999999999999998754
No 18
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.3e-41 Score=336.40 Aligned_cols=303 Identities=23% Similarity=0.351 Sum_probs=234.0
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..|++|++.|++++|+|++ .+|+||+.|++|++|++...............+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4689999999999999875 799999999999999987432222122223468999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC--cE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD--NI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 200 (377)
+||+.+++. ...+.+|...|.+++|+|++++|++|+.|++|++||...............|...|.+++|+|++ ..
T Consensus 456 vwd~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 456 LWDLAAGVS--TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEETTTTEE--EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEECCCCcc--eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 999998854 45678999999999999999999999999999999986543222111124688889999999986 68
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++++.|+.|++||++.... ...+.+|...|++++|+|++.+|++++.|++|++||+... .
T Consensus 534 l~s~s~d~~v~vwd~~~~~~----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~---------------~ 594 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKL----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG---------------K 594 (694)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT---------------E
T ss_pred EEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------------c
Confidence 99999999999999976542 4567889999999999999999999999999999996432 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee------------ccccceecceeEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH------------TEHRAHNQDVNCV 348 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~------------~~~~~h~~~v~~v 348 (377)
++..+.. ...|..++|+|++.++++++ ++.|++|+........ ...... .....+...++++
T Consensus 595 ~~~~~~~--~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 668 (694)
T 3dm0_A 595 KLYSLEA--NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVE---DLKVDLKAEAEKADNSGPAATKRKVIYCTSL 668 (694)
T ss_dssp EEECCBC--SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEE---EECCCCC----------------CCCCEEEE
T ss_pred eEEEecC--CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChh---hhccccccccccccccccccCCceeEEeeeE
Confidence 2333332 34799999999887777654 5669999876542110 000000 0001122347899
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|+| ++.+|+|||.||+|+||++..
T Consensus 669 ~~sp-dg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 669 NWSA-DGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EECT-TSSEEEEEETTSEEEEEEC--
T ss_pred EEcC-CCCEEEEEcCCCeEEEEeccC
Confidence 9999 577899999999999999864
No 19
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.8e-41 Score=307.40 Aligned_cols=309 Identities=18% Similarity=0.252 Sum_probs=245.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+..|.++|++++|+|++++|++|+.|++|++|+.... ...... ...+|...|.+++|+|++++|++++.|+.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~--~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN--KWVQVH-ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT--EEEEEE-EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC--cEEeee-eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 4568999999999999999999999999999998732 111111 2347999999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-EeeccccceeEEEEeeCCcEEEEe
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+++......+..|...|.+++|+|+++++++++.|+.|++||++......... ....|...+.+++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9888766666667899999999999999999999999999999998876543333 335678899999999999999999
Q ss_pred eCCCcEEEEecCccc--------------ccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 205 SYDDTVKLFKEDKAE--------------ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 205 s~dg~i~~~~~~~~~--------------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+.||.|++||++... ........+..|...|.+++|+|++.+|++++.|+.|++||....
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------ 234 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK------ 234 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT------
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC------
Confidence 999999999964210 011234556789999999999999999999999999999997532
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc------------------ce---
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD------------------MV--- 329 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~------------------~~--- 329 (377)
.+...+.+| ...|..++|+|++.+++++ .|+.+++|+.....+... +.
T Consensus 235 ---------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (372)
T 1k8k_C 235 ---------MAVATLASE-TLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 303 (372)
T ss_dssp ---------TEEEEEECS-SCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHH
T ss_pred ---------ceeEEEccC-CCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhh
Confidence 124455554 4589999999998888877 999999999866111000 00
Q ss_pred ----eeeee------eccccceecceeEEEecCCCC---ceEEEeeCCCcEEEEeccc
Q psy18091 330 ----SFDLV------HTEHRAHNQDVNCVAWNPVVP---GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 330 ----~~~~~------~~~~~~h~~~v~~v~~~p~~~---~~laS~s~Dg~i~iWd~~~ 374 (377)
..... .....+|..+|++++|+|.++ .+|+|||.||.|++||++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 304 NLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 00000 122358999999999886565 7999999999999999875
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-40 Score=324.31 Aligned_cols=282 Identities=35% Similarity=0.590 Sum_probs=239.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.+.|++++|+|++++|++++.|++|++|+... .. .....+|...|.+++|+|++++|++++.|+.++
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~--~~----~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QH----LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC--Ce----eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 346789999999999999999999999999999999752 11 112357899999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||... + ....+.+|...|.+++|+|++++|++++.|+.|++||.... ....+..|...|.+++|+|++++++
T Consensus 370 ~~~~~~-~--~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 370 LWNRNG-Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp EEETTC-C--EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC----EEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEcCCC-C--EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC----EEEEecCCCCCeEEEEECCCCCEEE
Confidence 999643 3 23567789999999999999999999999999999996432 3445678999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+++.|+.|++|+.... .+..+.+|...|++++|+|++++|++++.|++|++|+.. ..+.
T Consensus 443 ~~~~d~~v~~w~~~~~-----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~----------------~~~~ 501 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQ-----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN----------------GQLL 501 (577)
T ss_dssp EEETTSEEEEEETTSC-----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT----------------SCEE
T ss_pred EEcCCCEEEEEECCCC-----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC----------------CCEE
Confidence 9999999999996532 245677899999999999999999999999999999831 1245
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
..+.+| ...|+.++|+|++++|++++.|+.|++|+...+ .+ ....+|..+|++++|+| ++.+|+|+|
T Consensus 502 ~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~----------~~-~~~~~h~~~v~~~~fs~-dg~~l~s~~ 568 (577)
T 2ymu_A 502 QTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----------LL-QTLTGHSSSVWGVAFSP-DGQTIASAS 568 (577)
T ss_dssp EEEECC-SSCEEEEEECTTSSCEEEEETTSEEEEECTTSC----------EE-EEEECCSSCEEEEEECT-TSSCEEEEE
T ss_pred EEEeCC-CCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC----------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEe
Confidence 667776 458999999999999999999999999984211 11 22458999999999999 567899999
Q ss_pred CCCcEEEEe
Q psy18091 363 DDGDVKLWQ 371 (377)
Q Consensus 363 ~Dg~i~iWd 371 (377)
.||+|++||
T Consensus 569 ~D~~i~~Wd 577 (577)
T 2ymu_A 569 SDKTVKLWN 577 (577)
T ss_dssp TTSCEEEEC
T ss_pred CCCEEEEeC
Confidence 999999997
No 21
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-42 Score=316.10 Aligned_cols=311 Identities=18% Similarity=0.271 Sum_probs=227.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.++.|.++|++++|+|+|++|++|+.|++|++|+.... ..... ....+|...|.+++|+|++++|++++.|+.|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~--~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGN--GWKHA-RTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETT--EEEEC-CCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCC--ceEEE-EEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 44557789999999999999999999999999998742 11111 1235799999999999999999999999999999
Q ss_pred eCCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-cccceeEEEEeeCCcEEE
Q psy18091 125 DKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 125 d~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 202 (377)
|+.+++ ......+.+|...|.+++|+|++++|++++.|+.|++||++......+...+.. |...|.+++|+|++++++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 998876 334566788999999999999999999999999999999987754334445666 899999999999999999
Q ss_pred EeeCCCcEEEEecCcccc--------------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 203 SASYDDTVKLFKEDKAEA--------------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~--------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+++.|+.|++||+..... .......+ .|...|.+++|+|++++|++++.|++|++||+......
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~- 240 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP- 240 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC-
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc-
Confidence 999999999999852210 01123344 89999999999999999999999999999998654321
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC----CCCc-----------------
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA----GDSD----------------- 327 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~----~~~~----------------- 327 (377)
..+...+.+| ...|..++|+|++.+|++++.++.+ +|...... ....
T Consensus 241 ----------~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (377)
T 3dwl_C 241 ----------PRALITVKLS-QLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEG 308 (377)
T ss_dssp ----------EEECCCEECS-SSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCC
T ss_pred ----------ceeeEeecCC-CCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccc
Confidence 1123344554 4589999999999999888766666 66543111 0000
Q ss_pred ---c---------eeee---------eeeccccceecceeEEEecCCCCc---eEEEeeCCCcEEEEec
Q psy18091 328 ---M---------VSFD---------LVHTEHRAHNQDVNCVAWNPVVPG---MLASCSDDGDVKLWQI 372 (377)
Q Consensus 328 ---~---------~~~~---------~~~~~~~~h~~~v~~v~~~p~~~~---~laS~s~Dg~i~iWd~ 372 (377)
. ..+. .......+|...|+++++.+.++. .|+|||.||.|+|||+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 309 REEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 0000 000112349999999998764443 6999999999999986
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.6e-41 Score=315.59 Aligned_cols=298 Identities=18% Similarity=0.260 Sum_probs=221.7
Q ss_pred ccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~ 122 (377)
...+|...|++++|+| ++++||+|+.||+|+|||+...... ..+...+|...|++++|+| ++++|++|+.|++|+
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~---~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP---TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC---EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce---eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 4567889999999999 5679999999999999998742211 1222358999999999998 689999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-IL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 201 (377)
+||++++..........+...+.+++|+|++++|++|+.||.|++||++... ...+..|...|.+++|+|++. ++
T Consensus 191 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 191 LQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEEECTTCSSEE
T ss_pred EeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----eEEEecccceEEeeeecCCCceEE
Confidence 9999877554333333445567899999999999999999999999987542 234578999999999999875 78
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.|+.|++||++..... ..+....+|...|++++|+|+|.+|++++.|++|++||........
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~------------- 332 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGK-ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL------------- 332 (435)
T ss_dssp EEEETTSBCCEEETTTCCSS-SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE-------------
T ss_pred EEecCcceeeEEeccccccc-ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce-------------
Confidence 89999999999998765432 1233456799999999999999999999999999999975432111
Q ss_pred EEeecCCC-----CcceeEEEecccCCEEEEEe------------CCCcEEEEEeCCCCCCCcceeeeeeeccccceecc
Q psy18091 282 VCTLSGHH-----GRTIYDISWCHLTDLIATAC------------GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQD 344 (377)
Q Consensus 282 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~------------~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 344 (377)
.+.+|. ...+....|++.+.++++++ .++.|++|+..... ++.....+|...
T Consensus 333 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~---------~~~~l~~~~~~~ 401 (435)
T 4e54_B 333 --GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK---------MMCQLYDPESSG 401 (435)
T ss_dssp --EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC---------EEEEECCSSCCC
T ss_pred --EEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc---------EEEEEeCCCCCc
Confidence 111110 11223344555555444443 34679999765443 233334578888
Q ss_pred eeEE-EecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 345 VNCV-AWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 345 v~~v-~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
|.++ +|+| ++.+||||+ |+.|+|||++..+
T Consensus 402 v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 402 ISSLNEFNP-MGDTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCEEEECT-TSSCEEEEC-SSEEEECCCC---
T ss_pred EEEEEEECC-CCCEEEEEc-CCcEEEEECCcCe
Confidence 9987 6999 467888876 7899999998754
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.4e-39 Score=291.67 Aligned_cols=290 Identities=15% Similarity=0.233 Sum_probs=240.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|.+.|++++|+|++++|++++ |++|++|+................+|...|.+++|+|++++|++++.|+.|++||
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 357999999999999999999999 9999999987533222222222236889999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+++......+..|...|.+++|+|+++++++++.|+.|++||+++.. ....+..|...+.+++|+|+++++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT---LVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc---eeeeeecccCceEEEEECCCCCEEEEEe
Confidence 9988765667788899999999999999999999999999999998763 3445677889999999999999999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++||++..... .. ..|...+.+++|+|++.+|++++.|+.|++|+..... ...+
T Consensus 203 ~dg~i~~~d~~~~~~~----~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----------------~~~~ 261 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQL----QQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----------------KYQL 261 (337)
T ss_dssp TTSEEEEEETTTTEEE----EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----------------EEEE
T ss_pred cCCcEEEEECCCCceE----ee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----------------eEEE
Confidence 9999999998765431 12 2467789999999999999999999999999964321 1223
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.+ +...|..+.|+|+++++++++.||.+++|+...... +. ...|...|.+++|+|. +..|++++.||
T Consensus 262 ~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~---------~~--~~~~~~~v~~~~~s~~-~~~l~~~~~dg 328 (337)
T 1gxr_A 262 HL-HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS---------IF--QSKESSSVLSCDISVD-DKYIVTGSGDK 328 (337)
T ss_dssp CC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---------EE--EEECSSCEEEEEECTT-SCEEEEEETTS
T ss_pred cC-CccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE---------EE--EecCCCcEEEEEECCC-CCEEEEecCCC
Confidence 34 356899999999999999999999999998765431 11 1247789999999994 67899999999
Q ss_pred cEEEEecc
Q psy18091 366 DVKLWQIK 373 (377)
Q Consensus 366 ~i~iWd~~ 373 (377)
.|++||+.
T Consensus 329 ~i~iw~~~ 336 (337)
T 1gxr_A 329 KATVYEVI 336 (337)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999985
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-40 Score=301.06 Aligned_cols=314 Identities=14% Similarity=0.228 Sum_probs=240.8
Q ss_pred ccccccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC----CCEEEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC----GNFIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~----~~~l~s~s 116 (377)
.+.+|.++|++++|+|+ ..++++++.++.|++|+.................|...|.+++|+|+ +++|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34689999999999984 45666666777999999875332222222222347788999999998 67999999
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEe---eccccceeEE
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVI---NAHIQDVKKV 192 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~---~~~~~~v~~~ 192 (377)
.|+.|++||+.+++. ...+.+|..+|.+++|+| ++++|++++.||.|++||++..... ..+ ..|...|.++
T Consensus 93 ~dg~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 SRGIIRIINPITMQC--IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV---AIFGGVEGHRDEVLSA 167 (366)
T ss_dssp TTCEEEEECTTTCCE--EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE---EEECSTTSCSSCEEEE
T ss_pred CCCEEEEEEchhceE--eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE---EEecccccccCceeEE
Confidence 999999999988764 456778999999999999 8999999999999999999876433 334 5788999999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccc------------------------eeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADW------------------------INFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
+|+|+++++++++.||.|++||++...... ..+.....|...|.+++|+ +.+|+
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 999999999999999999999987543210 0112233489999999999 78999
Q ss_pred EeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc--CCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 249 TCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 249 s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
+++.|+.|++||............. ......+...+.+| ...|+.+.|+|+ +.+|++++.||.|++|+....+...
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKP-SESNVTILGRFDYS-QCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHK 323 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCT-TCCCEEEEEEEECS-SCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGG
T ss_pred EEecCCEEEEEeCCCcccccccccc-CCcchheecccccc-CCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcc
Confidence 9999999999998655432221111 12233556666665 457999999999 9999999999999999986543211
Q ss_pred cceeeeeeeccccce--ecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 327 DMVSFDLVHTEHRAH--NQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.. . ....+| ..+|++++|+| ++.+|++|+.||.|+|||++.
T Consensus 324 ~~-----~-~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 324 AK-----C-TTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CE-----E-EEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred cc-----c-eEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEecC
Confidence 00 1 112344 78999999999 577899999999999999863
No 25
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-39 Score=301.45 Aligned_cols=308 Identities=18% Similarity=0.205 Sum_probs=229.2
Q ss_pred cccccccCCEEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i 121 (377)
..+.+|.+.|++++|+|++ ++|++|+.|++|++||...... ...+...+|...|.+++|+| ++++|++++.|+.|
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK---TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC---EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc---ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 4678999999999999999 9999999999999999874221 11112247999999999999 68999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-E
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-I 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 200 (377)
++||+.+..........+|...|.+++|+|+++++++++.|+.|++||++.. +...+..|...|.+++|+|+++ +
T Consensus 144 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 144 TLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH----EIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC----EEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC----EEEEeccCCCcEEEEEECCCCCCE
Confidence 9999987554433333445688999999999999999999999999999532 3445678999999999999998 9
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC-C--C
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-N--D 276 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-~--~ 276 (377)
+++++.|+.|++||++...........+ .|...|++++|+| ++.+|++++.|+.|++||+........+.... . .
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 9999999999999998643221122223 6999999999999 99999999999999999975433211110000 0 0
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc-cceecceeEEEecCCCC
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH-RAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~ 355 (377)
........+ +....+..+.++|++.+ +++.|+.|++|+....+. +.... ..|...+.+++|+| ++
T Consensus 299 ~~~~~~~~~--~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~---------~~~l~~~~~~~~~~~~~~s~-~g 364 (383)
T 3ei3_B 299 HLTPIKATW--HPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGL---------VHQLRDPNAAGIISLNKFSP-TG 364 (383)
T ss_dssp TSCCCCCEE--CSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCE---------EEEECBTTBCSCCCEEEECT-TS
T ss_pred cccceEEec--cCCCCceEEEecCCccc--ccCCCCeEEEEecCCCce---------eeeecCCCCCceEEEEEEec-Cc
Confidence 000000000 11224455667776666 778999999999765431 11111 23667888889999 46
Q ss_pred ceEEEeeCCCcEEEEeccc
Q psy18091 356 GMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~~ 374 (377)
.+|++|+ ||.|+|||++.
T Consensus 365 ~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 365 DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp SEEEEEE-TTEEEEEECC-
T ss_pred cEEEEec-CCcEEEEecCC
Confidence 7899997 99999999874
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-39 Score=288.88 Aligned_cols=260 Identities=25% Similarity=0.443 Sum_probs=211.9
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATTA 122 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i~ 122 (377)
.+.+|.+.|++++|+|+|++||||+.|++|++|+++..... .. ....+|...|.+++|+|+ +++|++|+.|++|+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~--~~-~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK--LI-DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC--CC-EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE--EE-EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 57899999999999999999999999999999998632111 11 123589999999999874 89999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC---
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF--- 197 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 197 (377)
+||+.+++......+.+|...|.+++|+|+ +.+|++++.|+.|++||++...... ...+..|...+.+++|+|+
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC--
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCccc
Confidence 999988765555677889999999999997 8899999999999999998754321 2346789999999999997
Q ss_pred ----------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC---CeEEEeeCCCcEEEEeeeCC
Q psy18091 198 ----------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 198 ----------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~~~ 264 (377)
+++|++|+.|+.|++||++.....+.....+.+|...|.+++|+|++ .+|++++.|++|++||....
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 46999999999999999876543333456778999999999999985 78999999999999997542
Q ss_pred CCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
... +. ...+. ..+...|+.++|+|++++|++++.|+.+++|+..
T Consensus 240 ~~~-----------~~-~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGP-----------WK-KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSC-----------CE-EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCc-----------cc-eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 110 00 01111 1235689999999999999999999999999864
No 27
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.5e-40 Score=292.62 Aligned_cols=249 Identities=20% Similarity=0.310 Sum_probs=208.9
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
.+|...|.+++|+|++++|++++.|+.|++||+.+++. ...+..|..+|.+++|+|+++++++|+.|++|++||+.+.
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 87 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE--VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG 87 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce--eEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC
Confidence 47999999999999999999999999999999998753 4567889999999999999999999999999999999877
Q ss_pred CceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEeeC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSD 252 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~ 252 (377)
.. ...+..|...|.+++|+|+++++++|+.|+.|++||++.... ....+.+|...|.+++|+| ++.+|++|+.
T Consensus 88 ~~---~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 88 EK---VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp CE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred cE---EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 43 445778999999999999999999999999999999875422 2356788999999999999 5789999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc--cCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH--LTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
|++|++||+..... ...+..++...+..+.|++ ++.+|++++.|++|++|+.....
T Consensus 162 D~~v~iwd~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~------- 219 (304)
T 2ynn_A 162 DRTVKVWSLGQSTP---------------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------- 219 (304)
T ss_dssp TSEEEEEETTCSSC---------------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE-------
T ss_pred CCeEEEEECCCCCc---------------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc-------
Confidence 99999999743221 1123334456788888876 56799999999999999876432
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
++ ....+|...|++++|+|. +.+|+|||.||+|+|||++..+
T Consensus 220 --~~-~~~~~h~~~v~~~~~~p~-~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 220 --CV-ATLEGHMSNVSFAVFHPT-LPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp --EE-EEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEETTTCC
T ss_pred --cc-eeeCCCCCCEEEEEECCC-CCEEEEEcCCCeEEEEECCCCc
Confidence 11 223589999999999995 5689999999999999998654
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-39 Score=293.96 Aligned_cols=293 Identities=18% Similarity=0.240 Sum_probs=238.4
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..|.+|.+.|++++|+|++++|++|+.|+.|++||..... . .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--R---LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--E---EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--h---hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 4689999999999999999999999999999999986421 1 1123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCcee--------EEEEeecccc--c
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE--------CAAVINAHIQ--D 188 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~--------~~~~~~~~~~--~ 188 (377)
||+.+++... .+. |..++.+++|+|+++++++++.+ +.|++||+....... ....+..|.. .
T Consensus 101 wd~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 101 WDVSNGQCVA--TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp EETTTCCEEE--EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred EECCCCcEEE--Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence 9999886543 333 78899999999999999999999 999999987653211 1122334444 8
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+.+++|+|+++++++++.||.|++||++.... ....+..|...|.+++|+|++.+|++++.|+.|++||+...
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~---- 250 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE---YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL---- 250 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTE---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC----
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE---eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC----
Confidence 99999999999999999999999999976322 34567789999999999999999999999999999996432
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC--------------cEEEEEeCCCCCCCcceeeeee
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--------------AIRIFKENPEAGDSDMVSFDLV 334 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~v~~~~~~~~~~~~~~~~~~ 334 (377)
.+...+. +...+..+.|+|++.++++++.++ .+++|+..... .
T Consensus 251 -----------~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~ 307 (369)
T 3zwl_B 251 -----------QVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE----------E 307 (369)
T ss_dssp -----------CEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC----------E
T ss_pred -----------ceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc----------c
Confidence 1223333 345899999999999999999998 67777754432 1
Q ss_pred eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 335 ~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.....+|...|++++|+| ++.+|++|+.||.|+||+++..
T Consensus 308 ~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEECHH
T ss_pred hhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEECccc
Confidence 112357899999999999 5678999999999999999753
No 29
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.4e-39 Score=312.26 Aligned_cols=285 Identities=34% Similarity=0.575 Sum_probs=240.7
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|...|++++|+|++++|++++.|++|++|+... .. .....+|...|.+++|+|++++|++++.|+.++
T Consensus 255 ~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~----~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 255 LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QL----LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--CE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cE----EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEE
Confidence 346788999999999999999999999999999998652 11 112357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
+||...... ..+.+|..++.+++|+|+++++++++.|+.|++||.... ....+..|...|.+++|+|++++|+
T Consensus 329 ~w~~~~~~~---~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~----~~~~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 329 LWNRNGQHL---QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQTLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp EEETTSCEE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC----EEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEeCCCCee---EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC----EEEEecCCCCCeEEEEECCCCCEEE
Confidence 999876543 456789999999999999999999999999999996432 3445678999999999999999999
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
+++.|+.|++|+.... .+..+.+|...|++++|+|++++|++++.|++|++|+... .+.
T Consensus 402 ~~~~d~~v~~~~~~~~-----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~----------------~~~ 460 (577)
T 2ymu_A 402 SASDDKTVKLWNRNGQ-----LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG----------------QLL 460 (577)
T ss_dssp EEETTSEEEEECTTCC-----EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS----------------CEE
T ss_pred EEeCCCEEEEEeCCCC-----EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC----------------CEE
Confidence 9999999999996432 2456778999999999999999999999999999998421 234
Q ss_pred EeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee
Q psy18091 283 CTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS 362 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s 362 (377)
..+.+| ...|..++|+|++++|++++.|+.|++|+.... ++ ....+|..+|++++|+| ++.+|||++
T Consensus 461 ~~~~~~-~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~----------~~-~~~~~h~~~v~~l~~s~-dg~~l~s~~ 527 (577)
T 2ymu_A 461 QTLTGH-SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----------LL-QTLTGHSSSVRGVAFSP-DGQTIASAS 527 (577)
T ss_dssp EEEECC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSC----------EE-EEEECCSSCEEEEEECT-TSSCEEEEE
T ss_pred EEEcCC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC----------EE-EEEeCCCCCEEEEEEcC-CCCEEEEEE
Confidence 556665 458999999999999999999999999984221 11 22357999999999999 577899999
Q ss_pred CCCcEEEEeccc
Q psy18091 363 DDGDVKLWQIKL 374 (377)
Q Consensus 363 ~Dg~i~iWd~~~ 374 (377)
.||.|+|||+..
T Consensus 528 ~dg~v~lwd~~~ 539 (577)
T 2ymu_A 528 DDKTVKLWNRNG 539 (577)
T ss_dssp TTSEEEEECTTS
T ss_pred CcCEEEEEeCCC
Confidence 999999999754
No 30
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-40 Score=307.54 Aligned_cols=319 Identities=12% Similarity=0.146 Sum_probs=226.1
Q ss_pred cccc-ccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 43 SQTL-KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l-~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
...+ ++|.+.|++++|+| ++++|++|+.|++|++||................+|...|.+++|+|++++|++++.|+.
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCE
Confidence 3456 89999999999999 999999999999999999864111111111222358999999999999999999999999
Q ss_pred EEEEeCC---CCceEEe------E--EecC--ccCCEEEEE--EcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-
Q psy18091 121 TAVWDKR---SGQFECN------A--TLEG--HENEVKSVT--WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA- 184 (377)
Q Consensus 121 i~iwd~~---~~~~~~~------~--~~~~--h~~~v~~l~--~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~- 184 (377)
|++||+. +++.... . .+.. +...+.++. +++++.++++++.|+.|++||++.... ...+..
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~ 211 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER---LQIIENS 211 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE---EEEEECC
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee---eEEEccC
Confidence 9999984 4432211 1 1112 556677777 567899999999999999999987643 334455
Q ss_pred -cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-cCCcceEEEEEcC----CCCeEEEeeCCCcEEE
Q psy18091 185 -HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR----IGSRLATCSDDATVKI 258 (377)
Q Consensus 185 -~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~l~s~s~D~~i~i 258 (377)
|...|.+++|+|+++++++|+.||.|++||++.... ...+. .|...|.+++|+| ++.+|++++.|+.|++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~i 287 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL----IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 287 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE----EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEE
Confidence 888999999999999999999999999999986432 33443 6778999996664 5779999999999999
Q ss_pred EeeeCCCCCCCC-----------CCCCCCCcEEEEEeecC-CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 259 WKEYKPGNSAGI-----------PTPDNDSVWKCVCTLSG-HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 259 w~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
||+......... ..+..... ....+.+ .+...|..++|+ ++++|++++.|+.|++|+....+...
T Consensus 288 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 288 WNFVKGHCQYAFINSDEQPSMEHFLPIEKGL--EELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EETTTTEEEEEEESSSSCCCGGGGSCBCSSG--GGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEcCCCcEEEEEEcCCCCCccceeccccccc--ccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 997432110000 00000000 0000111 145678999999 67899999999999999976543111
Q ss_pred ccee-------ee---------e-----------eeccccceecceeEEEecCC-CCceEEEeeCCCcEEEEe
Q psy18091 327 DMVS-------FD---------L-----------VHTEHRAHNQDVNCVAWNPV-VPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 327 ~~~~-------~~---------~-----------~~~~~~~h~~~v~~v~~~p~-~~~~laS~s~Dg~i~iWd 371 (377)
.+.. +. . .......|...|++++|+|. +..+|+||+.||.|+||+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0000 00 0 00012248999999999985 366899999999999995
No 31
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.1e-40 Score=297.46 Aligned_cols=259 Identities=24% Similarity=0.466 Sum_probs=198.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i 121 (377)
..+.+|++.|++++|+|+|++|+||+.|++|++||+... .... .....+|...|.+++|+| ++++|++|+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~--~~~~-~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG--GQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT--EEEE-EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC--CcEE-EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 357899999999999999999999999999999998632 1111 112358999999999986 48999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC--
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-- 197 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 197 (377)
++||+.+++......+.+|...|.+++|+|+ +.+|++|+.|++|++||++.............|...+.++.|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 9999988765555678899999999999997 789999999999999999876443333345678888999999997
Q ss_pred ---------------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeCCCcEEE
Q psy18091 198 ---------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSDDATVKI 258 (377)
Q Consensus 198 ---------------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~i~i 258 (377)
+.+|++|+.|+.|++|+.+... .+.....+.+|...|.+++|+|++ .+|++++.|++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 4689999999999999986432 223456778999999999999986 78999999999999
Q ss_pred EeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 259 WKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 259 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
|+......... . ...+.+ +...|+.++|+|++++|++++.|+++++|+
T Consensus 243 w~~~~~~~~~~--------~---~~~~~~-~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 243 WTCDDASSNTW--------S---PKLLHK-FNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp EECSSTTCCCC--------B---CCEEEE-CSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred EEccCccccch--------h---hhhhhc-CCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 98643211000 0 011122 244677777777777777777777777774
No 32
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-39 Score=300.57 Aligned_cols=304 Identities=16% Similarity=0.286 Sum_probs=240.4
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEe
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWD 125 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd 125 (377)
.+|.+.|++++|+|++++|++|+.|++|++|+......... ......+|...|.+++|+|+ +++|++++.|+.|++||
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN-SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC-EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeeccccccccc-chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 45889999999999999999999999999999874211111 12234579999999999998 89999999999999999
Q ss_pred CCCCc------eE-EeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeecc------ccceeE
Q psy18091 126 KRSGQ------FE-CNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------IQDVKK 191 (377)
Q Consensus 126 ~~~~~------~~-~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~------~~~v~~ 191 (377)
+.+++ .. ....+..|...|.+++|+|+ +.++++++.|+.|++||++.... ...+..+ ...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE---VIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp TTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE---EEEECCCCCSSCCCCCEEE
T ss_pred CCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc---ceEEeccccccccCCceEE
Confidence 98765 11 12234678999999999998 78999999999999999987643 3334444 678999
Q ss_pred EEEeeCC-cEEEEeeCCC---cEEEEecCcccccceeeeecc-cCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 192 VRFHPFD-NILASASYDD---TVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 192 ~~~~~~~-~~l~s~s~dg---~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
++|+|++ .++++++.|+ .|++||++.... ....+. +|...|++++|+| ++.+|++++.|+.|++||+...
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~- 295 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANT---PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA- 295 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTS---CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC-
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCC---CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC-
Confidence 9999997 6899999999 999999986432 234566 8999999999999 8999999999999999986432
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC-CEEEEEeCCCcEEEEEeCCCCCCCccee--------------
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATACGDDAIRIFKENPEAGDSDMVS-------------- 330 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~~~~~~~~~~~~~~-------------- 330 (377)
.++..+.+| ...|..++|+|++ .++++++.|+.+++|+............
T Consensus 296 --------------~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (416)
T 2pm9_A 296 --------------EQLSQFPAR-GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWN 360 (416)
T ss_dssp --------------CEEEEEECS-SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------
T ss_pred --------------ccceeecCC-CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccc
Confidence 234556665 4589999999998 8999999999999999765432211000
Q ss_pred -------------eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 331 -------------FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 331 -------------~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
+.+ .....|..++.+++|+| ++.+||+|+.||+|+||++.+++
T Consensus 361 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 361 NVSREESKEKPSVFHL--QAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp ------CCSCCCSSCC--CCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCCCC-
T ss_pred cccccccccccccccc--cCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEeccCC
Confidence 000 11223778899999999 57899999999999999998763
No 33
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=290.09 Aligned_cols=306 Identities=17% Similarity=0.273 Sum_probs=232.3
Q ss_pred ccccccCCEEEEEECCCCCE-EEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC---CCEEEEEEC
Q psy18091 45 TLKGHQGRVWNVSWNPQGTM-ISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC---GNFIASASF 117 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~-l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~ 117 (377)
.+++|.+.|++++|+|++.. +++|+. |++|++|+.... .. ......+|...|.+++|+|+ +++|++++.
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG--DL--KLLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS--SE--EEEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC--cc--cceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 46789999999999999965 556666 999999998742 11 12223368899999999998 699999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEE------cCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc----c
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTW------SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI----Q 187 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~------~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~----~ 187 (377)
|+.|++||+.+++ .....+.+|...|.++.| +|++++|++++.|+.|++||++..... ...+..|. .
T Consensus 89 dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 89 GGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDP--VANMEPVQGENKR 165 (357)
T ss_dssp TSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSC--SEEECCCTTSCCC
T ss_pred CCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCc--ceeccccCCCCCC
Confidence 9999999998775 134567899999999955 678999999999999999999876522 22333333 3
Q ss_pred ceeEEE----EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC---CCCeEEEeeCCCcEEEEe
Q psy18091 188 DVKKVR----FHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR---IGSRLATCSDDATVKIWK 260 (377)
Q Consensus 188 ~v~~~~----~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~s~D~~i~iw~ 260 (377)
.+.++. |+|+++++++++.||.|++||++.... .....|...|.+++|+| ++.+|++++.|+.|++||
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 688888 678999999999999999999986553 23356888999999999 899999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcc----------e
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDM----------V 329 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~----------~ 329 (377)
........ ... ...+.+| ...|+.+.|+|++. ++++++.||.+++|+.......... -
T Consensus 241 ~~~~~~~~---------~~~-~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 241 MRTQHPTK---------GFA-SVSEKAH-KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp EEEEETTT---------EEE-EEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred CcCCCccc---------cee-eeccCCC-cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccc
Confidence 76432211 011 1123344 56899999999888 8999999999999997654321000 0
Q ss_pred eeeeeeccccceecceeEEEecCCCCceEE-EeeCCCcEEEEecccC
Q psy18091 330 SFDLVHTEHRAHNQDVNCVAWNPVVPGMLA-SCSDDGDVKLWQIKLE 375 (377)
Q Consensus 330 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~la-S~s~Dg~i~iWd~~~~ 375 (377)
....+ ....+|..+|++++|+|. +..|+ ||+.||.|+|||+..-
T Consensus 310 ~~~~~-~~~~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 310 SVSLL-QNVTLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEE-EEEECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC-
T ss_pred cccee-eccccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCc
Confidence 01111 223578999999999996 45566 9999999999999764
No 34
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=285.72 Aligned_cols=246 Identities=24% Similarity=0.379 Sum_probs=214.0
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..++||...|.+++|++++.++++++.|++|++||+... .. .. ....|...+.+++|+|++++|++++.|+.+++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~--~~-~~--~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i 148 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENG--KQ-IK--SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EE-EE--EEECCTTCCCCEEECTTSSEEEEECTTSEEEE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--CE-EE--EEeCCCccEEEEEECCCCCEEEEEcCCCcEEE
Confidence 358999999999999999999999999999999998742 11 11 12457778999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++.. ..+..|...|.+++|+|++++|++|+.|+.|++||+++.. +...+..|...|.+++|+|++++|++
T Consensus 149 ~~~~~~~~~--~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 149 FGVESGKKE--YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp EETTTCSEE--EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred EEcCCCcee--EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEEcCCCCEEEE
Confidence 999988643 4567788999999999999999999999999999998763 34567789999999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
|+.|+.|++||++.... ...+.+|...|.+++|+|++.+|++++.|++|++||+.. ..++.
T Consensus 224 ~s~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~---------------~~~~~ 284 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT---------------RTCVH 284 (321)
T ss_dssp ECTTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---------------TEEEE
T ss_pred EcCCCeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC---------------CEEEE
Confidence 99999999999875543 456788999999999999999999999999999999632 24567
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
++.+| ...|+.++|+|++..|++++.|+.|++|+.
T Consensus 285 ~~~~h-~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 285 TFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EECCC-SSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEcCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 77776 458999999999999999999999999974
No 35
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-38 Score=294.50 Aligned_cols=306 Identities=14% Similarity=0.200 Sum_probs=235.5
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCC----C---CEEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPC----G---NFIA 113 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~----~---~~l~ 113 (377)
...+++|.+.|++++|+| ++|++|+.||+|++|+....... .... ....+|...|.+++|+|+ + ++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKS-YSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGE-EEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcc-eEEecCCCcEEEEEEecccccCCccccEEE
Confidence 346899999999999999 89999999999999998753211 1111 223479999999999999 9 9999
Q ss_pred EEECCCcEEEEeCCCCce---EEeEEecCc-----cCCEEEEEEc----CCCCE-EEEEECCCcEEEEEcCC------CC
Q psy18091 114 SASFDATTAVWDKRSGQF---ECNATLEGH-----ENEVKSVTWS----KNGQF-LATCSRDKSVWVWEVGE------ED 174 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~---~~~~~~~~h-----~~~v~~l~~~----~~~~~-l~s~~~dg~v~~wd~~~------~~ 174 (377)
+++.|+.|++||+.+++. .....+..| ...|.+++|+ |++++ |++++.||.|++||++. ..
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999876652 113456777 5999999999 99999 99999999999999987 33
Q ss_pred cee--EEEEe-------eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc---C---CcceEEEE
Q psy18091 175 EYE--CAAVI-------NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS---H---TSTVWSLA 239 (377)
Q Consensus 175 ~~~--~~~~~-------~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~---h---~~~v~~~~ 239 (377)
... ....+ ..|...+.+++|+|++ ++++++.||.|++||++.... ...+.. | ...|.+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP----LYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE----EEEEECCC---CCCCCEEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce----eEEEeccccccccCCccceEE
Confidence 221 11123 4478889999999999 999999999999999976443 345566 8 89999999
Q ss_pred EcCCCCeEEEeeCC---CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC------------CCcceeEEEecccCCE
Q psy18091 240 FDRIGSRLATCSDD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH------------HGRTIYDISWCHLTDL 304 (377)
Q Consensus 240 ~~~~~~~l~s~s~D---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~ 304 (377)
|+|++.+|++++.| +.|++||+... .+...+.+. +...|..+.|+|++++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFG---------------ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTC---------------CEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCC---------------cccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 99999999999999 99999997432 123344430 3568999999999999
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce---------------ecceeEEEecCCCC---------ceEEE
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH---------------NQDVNCVAWNPVVP---------GMLAS 360 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~---------~~laS 360 (377)
|++++.|+.+++|+....+. +..+.. .....+| ..+|++++|+|.+. .+|++
T Consensus 306 l~~~~~dg~i~iwd~~~~~~---~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s 381 (397)
T 1sq9_A 306 LCSAGWDGKLRFWDVKTKER---ITTLNM-HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCC 381 (397)
T ss_dssp EEEEETTSEEEEEETTTTEE---EEEEEC-CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEE
T ss_pred EEEEeCCCeEEEEEcCCCce---eEEEec-ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEE
Confidence 99999999999998765421 111100 0000134 89999999999531 68999
Q ss_pred eeCCCcEEEEecccC
Q psy18091 361 CSDDGDVKLWQIKLE 375 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~ 375 (377)
|+.||.|++||++..
T Consensus 382 ~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 382 VCLDRSIRWFREAGG 396 (397)
T ss_dssp EETTTEEEEEEEEC-
T ss_pred ecCCCcEEEEEcCCC
Confidence 999999999999865
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.6e-38 Score=279.29 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=211.1
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEV 170 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~ 170 (377)
..+|...|.+++|+|+|++|++|+.|+.|+|||+..+.......+.+|.++|.+++|+|+ +++|++|+.|++|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 358999999999999999999999999999999875544456778999999999999863 889999999999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeC--CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-----
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPF--DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI----- 243 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----- 243 (377)
+.... .....+..|...|.+++|+|+ +.+|++++.|+.|++|+++..... ....+.+|...|.+++|+|+
T Consensus 85 ~~~~~-~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 85 ENGRW-SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp SSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--CCEEEECCSSCEEEEEECCCC----
T ss_pred CCCce-EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--eeeeeecccCccceEeecCCccccc
Confidence 86531 223446678899999999997 789999999999999998754321 12456789999999999997
Q ss_pred --------CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccC---CEEEEEeCCC
Q psy18091 244 --------GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLT---DLIATACGDD 312 (377)
Q Consensus 244 --------~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~ 312 (377)
+.+|++|+.|++|++||..... ..+.+...+.+| ...|.+++|+|++ .+|++++.|+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-----------~~~~~~~~l~~H-~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDA-----------QTYVLESTLEGH-SDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTT-----------TEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCC-----------ceEEEEEEecCC-CCceEEEEECCCCCCceEEEEEECCC
Confidence 4699999999999999976432 123345677776 4589999999984 7999999999
Q ss_pred cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 313 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
++++|+........ ...++ ...+|...|.+++|+| ++.+||+++.||+|+||+...+
T Consensus 230 ~v~iWd~~~~~~~~---~~~~~--~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPW---KKTLL--KEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCC---EEEES--SSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCcc---ceeee--ecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEECCC
Confidence 99999976533211 00111 1246788999999999 4678999999999999998743
No 37
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-38 Score=296.89 Aligned_cols=248 Identities=28% Similarity=0.543 Sum_probs=213.6
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
...++++|.+.|++++|+|+|++|++|+.|++|++||...... .....+|...|.+++|+|++++|++|+.|+.|
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~-----~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC-----IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE-----EECCCCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 3457899999999999999999999999999999999864211 11135799999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC----
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF---- 197 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---- 197 (377)
++||+.++.. ...+.+|...|.++.|+|++.++++|+.|+.|++||+++.. +...+..|...|.++.|+|+
T Consensus 217 ~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 217 KMWEVQTGYC--VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE---CKAELREHRHVVECISWAPESSYS 291 (410)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECCSCGGG
T ss_pred EEEECCCCcE--EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeEecCCCceEEEEEEcCccccc
Confidence 9999998864 45678999999999999999999999999999999998764 34557789999999999996
Q ss_pred ----------------CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 198 ----------------DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 198 ----------------~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
+.++++|+.|+.|++||++.... +..+.+|...|++++|+|++.+|++|+.|++|++||.
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~----~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce----EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 56899999999999999876543 4567789999999999999999999999999999986
Q ss_pred eCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
... .+...+.+| ...|++++|+|++.+|++|+.|++|++|+.
T Consensus 368 ~~~---------------~~~~~~~~h-~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 368 KNK---------------RCMKTLNAH-EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp TTS---------------CCCEEEECC-SSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCC---------------ceEEEEcCC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 422 123456665 458999999999999999999999999963
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=284.49 Aligned_cols=264 Identities=27% Similarity=0.547 Sum_probs=215.0
Q ss_pred ccCcC-ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEE-ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQR-TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~-~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|.. .|..++|+|+|++|++|+.|+.|+|||+.++....... ..+|...|.+++|+|++++|++|+.|+++++||+.
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 46877 89999999999999999999999999998776543333 46899999999999999999999999999999987
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
... ..+...+.+|...|.+++|+|++++|++|+.|+.|++|++..... ......+..|...|.+++|+|++.+|++++
T Consensus 92 ~~~-~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 92 QDD-FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp CC--EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC-EEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred CCC-eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC-eEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 653 344566788999999999999999999999999999999875432 223456788999999999999999999999
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcc---
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDM--- 328 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~--- 328 (377)
.|++|++|+.... .+.+...+.+| ...|++++|+|++++|++++.|++|++|+..........
T Consensus 170 ~d~~i~~w~~~~~-------------~~~~~~~~~~h-~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 170 YDDTVKLYREEED-------------DWVCCATLEGH-ESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp TTSCEEEEEEETT-------------EEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred CCCcEEEEEecCC-------------CEEEEEEecCC-CCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 9999999997432 23455677776 458999999999999999999999999986432211100
Q ss_pred ---eeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 329 ---VSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 329 ---~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
..+.++......|...|.+++|+|. +..|++++.|+.|++|++..
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQL-TGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTT-TCCEEEEETTSCEEEEEECT
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecC-CCEEEEEeCCCeEEEEEeCC
Confidence 1112222333348889999999995 56899999999999999864
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-39 Score=301.59 Aligned_cols=295 Identities=16% Similarity=0.336 Sum_probs=234.9
Q ss_pred ccCCEEEEEECCCCC-EEEEE----------eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC
Q psy18091 49 HQGRVWNVSWNPQGT-MISSC----------GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 49 h~~~V~~v~~~~~g~-~l~s~----------s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
+...|.+++|+|+|+ +|++| +.|++|++|+....... +.+....|...|.+++|+|++++|++++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE---KPIASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC---SCSCCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC---cEEEEEecCCceEEEEECCCCCeEEEEcc
Confidence 345788999999997 99999 89999999998742211 11222368889999999999999999999
Q ss_pred CCcEEEEeCCCC--ceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCC------ceeEEEEeeccccc
Q psy18091 118 DATTAVWDKRSG--QFECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEED------EYECAAVINAHIQD 188 (377)
Q Consensus 118 d~~i~iwd~~~~--~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~------~~~~~~~~~~~~~~ 188 (377)
|+.|++||+.+. .......+.+|...|.+++|+|+ ++++++++.|+.|++||+.... ..........|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 999999999861 11245677889999999999998 8999999999999999998765 22222223568889
Q ss_pred eeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccC------CcceEEEEEcCCC-CeEEEeeCCC---cEE
Q psy18091 189 VKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSH------TSTVWSLAFDRIG-SRLATCSDDA---TVK 257 (377)
Q Consensus 189 v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~-~~l~s~s~D~---~i~ 257 (377)
+.+++|+|+ +.++++++.||.|++||++.... ...+..| ...|.+++|+|++ .+|++++.|+ .|+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 999999999 78999999999999999976543 2333333 7889999999997 5899999999 999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
+||+...... ...+. + |...|..++|+| ++.+|++++.|+.+++|+....+ .+
T Consensus 244 ~~d~~~~~~~--------------~~~~~~~-~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---------~~- 298 (416)
T 2pm9_A 244 IWDLRNANTP--------------LQTLNQG-HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---------QL- 298 (416)
T ss_dssp EEETTSTTSC--------------SBCCCSC-CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC---------EE-
T ss_pred EEeCCCCCCC--------------cEEeecC-ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---------cc-
Confidence 9997643221 12233 3 356899999999 88999999999999999875432 11
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
....+|...|++++|+|.++.+|++++.||.|+|||++..
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 1234788999999999965479999999999999999764
No 40
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=284.54 Aligned_cols=248 Identities=17% Similarity=0.255 Sum_probs=199.1
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|...|++++|+|++ .|++|+.||+|++||+++...... ......+|...|++++|+|++++|++|+.|+.|++||+.+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~-~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV-SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE-eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 56789999999985 678999999999999975332222 2223458999999999999999999999999999999998
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC-CcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF-DNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~ 206 (377)
++. ...+.+|.+.|.+++|+|++. .|++++.|++|++||++........ ....+...+.+++|+|+ ++++++|+.
T Consensus 159 ~~~--~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 159 QVV--LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TEE--EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTEEEEEET
T ss_pred CcE--EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcceEEecc
Confidence 854 567889999999999999885 7899999999999999887543221 12344556889999996 468899999
Q ss_pred CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 207 DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 207 dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
||.|++||++..+. +..+.+|...|++++|+|++ .+|++|+.|++|++||.... ++ ..+
T Consensus 236 dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---------------~~-~~~ 295 (344)
T 4gqb_B 236 NGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---------------EL-FRS 295 (344)
T ss_dssp TSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---------------EE-EEE
T ss_pred CCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---------------cE-EEE
Confidence 99999999986543 46678999999999999998 57999999999999985321 12 235
Q ss_pred cCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPE 322 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~ 322 (377)
.+| ...|++++|+|++. +|++++.|++|++|+...+
T Consensus 296 ~~H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 296 QAH-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred cCC-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 565 45899999999875 6789999999999987543
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=281.00 Aligned_cols=262 Identities=25% Similarity=0.402 Sum_probs=206.4
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe-cC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL-EG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|.+++|+|+ +|++|+.|+.|++||+..+.......+ .+ |...|.+++|+|++++|++|+.|++|++||+.
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~ 88 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKE 88 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcc
Confidence 479999999999987 999999999999999987654444445 44 99999999999999999999999999999985
Q ss_pred CCC----ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 172 EED----EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 172 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
... ...+...+.+|...|.+++|+|++++|++|+.|+.|++||++.....+.....+.+|...|.+++|+|++.+|
T Consensus 89 ~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 89 ESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp ------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred cCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 421 2234556788999999999999999999999999999999854333333456678999999999999999999
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc--CCEEEEEeCCCcEEEEEeCCCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL--TDLIATACGDDAIRIFKENPEAGD 325 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~v~~~~~~~~~ 325 (377)
++++.|++|++||.... .+.+...+.+|. ..|+.++|+|+ +..|++++.|+++++|+.......
T Consensus 169 ~s~s~D~~i~iW~~~~~-------------~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 169 ASSSYDDTVRIWKDYDD-------------DWECVAVLNGHE-GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEEETTSCEEEEEEETT-------------EEEEEEEECCCS-SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred EEEcCCCeEEEEECCCC-------------CeeEEEEccCCC-CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 99999999999986532 235677787764 58999999998 568999999999999987543211
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
. ...+.........|...|.+++|+|. + .|+||+.||+|+|||.+.
T Consensus 235 ~-~~~~~~~~~~~~~h~~~v~~v~~s~~-~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 235 D-QQEWVCEAILPDVHKRQVYNVAWGFN-G-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp S-CEEEEEEEECCSCCSSCEEEEEECTT-S-CEEEEETTSCEEEEEEET
T ss_pred c-cceeEEeeecccccccceEEEEEcCC-C-EEEEEeCCCEEEEEEcCC
Confidence 1 11112222223348899999999973 4 789999999999999864
No 42
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-37 Score=275.91 Aligned_cols=285 Identities=22% Similarity=0.276 Sum_probs=230.8
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..++++|.+.|++++| |++++|++|+.||+|++||.... .. ......|...|.+++|+|++++|++++.|+.++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~--~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQ--WL---GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSS--EE---EEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCC--EE---EEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 3478999999999999 99999999999999999998631 11 112346889999999999999999999999999
Q ss_pred EEeCCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 123 VWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 123 iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
+|++.... ......+.+|...|.+++| +++++++++.|+.|++|| .. .....+..|...+.++.++| +++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~---~~~~~~~~~~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EG---SLVYNLQAHNASVWDAKVVSFSENK 157 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TT---EEEEEEECCSSCEEEEEEEETTTTE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CC---cEEEecccCCCceeEEEEccCCCCE
Confidence 99986532 2234567889999999999 577999999999999999 22 23455678899999999999 8899
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+++++.||.|++||.... ...+.. |...|.+++|+|++. +++++.|+.|++||....
T Consensus 158 l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------------- 215 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV------IKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------------- 215 (313)
T ss_dssp EEEEETTSCEEEEETTEE------EEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC---------------
T ss_pred EEEEECCCCEEEEecCce------EEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch---------------
Confidence 999999999999994422 233444 889999999999988 999999999999996432
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.+...+.+| ...|..++|+|++ .+++++.|+.+++|+....+ .......|..+|.+++|+|+ +. ++
T Consensus 216 ~~~~~~~~~-~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~i~~~~~~~~-~~-~~ 281 (313)
T 3odt_A 216 DVLRTYEGH-ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS----------LKQVITLPAISIWSVDCMSN-GD-II 281 (313)
T ss_dssp CEEEEEECC-SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC----------EEEEEECSSSCEEEEEECTT-SC-EE
T ss_pred hhhhhhhcC-CceEEEEEEecCC-CEEEEecCCEEEEEECCCCc----------eeEEEeccCceEEEEEEccC-CC-EE
Confidence 234555555 4689999999988 68999999999999875543 11123467889999999995 44 66
Q ss_pred EeeCCCcEEEEecccCC
Q psy18091 360 SCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 360 S~s~Dg~i~iWd~~~~~ 376 (377)
+++.||.|++||++..+
T Consensus 282 ~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEETTSCEEEEESCGGG
T ss_pred EEeCCCcEEEEeCCCCc
Confidence 89999999999998764
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-37 Score=289.34 Aligned_cols=301 Identities=17% Similarity=0.267 Sum_probs=231.4
Q ss_pred ccccCCEEEEEECCCCC-EEEEEeCCCcEEEeec----ccCCCccc--ceeeee---------ccCcCceeEEEECCCCC
Q psy18091 47 KGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGK----ESFGNKFT--AKAILS---------DGHQRTIRETAWSPCGN 110 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~----~~~~~~~~--~~~~~~---------~~h~~~V~~~~~~~~~~ 110 (377)
..|.+.|++++|+|+|+ +|++|+.|++|++|++ ......+. ....+. .+|...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34569999999999999 9999999999999999 54221000 001111 12677999999999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE------------
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC------------ 178 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~------------ 178 (377)
+|++++.|+.|++||. +++ ....+.+|...|.+++|+|++++|++++.|+.|++||+........
T Consensus 122 ~l~~~~~dg~i~i~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 198 (425)
T 1r5m_A 122 SIVTGVENGELRLWNK-TGA--LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSIN 198 (425)
T ss_dssp EEEEEETTSCEEEEET-TSC--EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------
T ss_pred EEEEEeCCCeEEEEeC-CCC--eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcccee
Confidence 9999999999999994 443 3456788999999999999999999999999999999875432110
Q ss_pred -----------------------------------------EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 179 -----------------------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 179 -----------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
...+..|...+.+++|+|+++++++++.||.|++|++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 112345777899999999999999999999999999876
Q ss_pred ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEE
Q psy18091 218 AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDIS 297 (377)
Q Consensus 218 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 297 (377)
... ...+..|...|.+++|+|++ ++++++.|+.|++||+... .+...+.+| ...|..+.
T Consensus 279 ~~~----~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------------~~~~~~~~~-~~~i~~~~ 337 (425)
T 1r5m_A 279 GNS----QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN---------------TLLALSIVD-GVPIFAGR 337 (425)
T ss_dssp BSC----SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT---------------EEEEEEECT-TCCEEEEE
T ss_pred Ccc----ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC---------------cEeEecccC-CccEEEEE
Confidence 543 34567799999999999999 9999999999999996321 234555554 45899999
Q ss_pred ecccCCEEEEEeCCCcEEEEEeCCCCCCC-----------cceeeeeeeccccceec--ceeEEEecCCCCceEEEeeCC
Q psy18091 298 WCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFDLVHTEHRAHNQ--DVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 298 ~~~~~~~l~~~~~d~~i~v~~~~~~~~~~-----------~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~laS~s~D 364 (377)
|+|++++|++++.||.+++|+........ .......+ ....+|.. .|++++|+|+ +.+|++|+.|
T Consensus 338 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d 415 (425)
T 1r5m_A 338 ISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLY-ASYQSSQDNDYIFDLSWNCA-GNKISVAYSL 415 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEE-EEECCTTCCCCEEEEEECTT-SSEEEEEESS
T ss_pred EcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhh-hhhcCcccCCceEEEEccCC-CceEEEEecC
Confidence 99999999999999999999875322000 00000012 22356755 9999999995 6689999999
Q ss_pred CcEEEEecc
Q psy18091 365 GDVKLWQIK 373 (377)
Q Consensus 365 g~i~iWd~~ 373 (377)
|.|++||++
T Consensus 416 g~i~iw~~~ 424 (425)
T 1r5m_A 416 QEGSVVAIP 424 (425)
T ss_dssp SCCEEEECC
T ss_pred ceEEEEeec
Confidence 999999986
No 44
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=305.29 Aligned_cols=299 Identities=13% Similarity=0.167 Sum_probs=217.3
Q ss_pred cccccccCCEEEEEECCC------CCEEEEEeCCCcEEEeecccCCCc------ccceeeeeccCcCceeEEEECCCCCE
Q psy18091 44 QTLKGHQGRVWNVSWNPQ------GTMISSCGEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGNF 111 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~------g~~l~s~s~D~~v~~W~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~~~~~~ 111 (377)
.++.+|.+.|++++|+|+ +.+||+++.||+|++||+...... .........+|...|.+++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 346788999999999997 579999999999999998642211 00011123578999999999986 48
Q ss_pred EEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEE--EEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-
Q psy18091 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSV--TWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ- 187 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l--~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~- 187 (377)
|++|+.||+|++||+.++.. ....+.+|...|.++ +|+|++ ++|+||+.|++|++||+++..... .+..|..
T Consensus 280 lasgs~DgtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRG 355 (524)
T ss_dssp EEEEETTSEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSC
T ss_pred EEEEeCCCEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---cccccccc
Confidence 99999999999999987642 234578899999999 578887 899999999999999998654322 2334433
Q ss_pred -ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCC
Q psy18091 188 -DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 188 -~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~ 266 (377)
.+.+++|+|+++.+++++.|+.|++||++.... ...+.+|...|++++|+|+|++|++|+.|++|++|+....
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-- 429 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-- 429 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS--
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh--
Confidence 478899999999999999999999999876442 3456789999999999999999999999999999996432
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN 346 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 346 (377)
. ...... ....++...++.++|+|+++++.. .+ ..++|...... . ......+|..+|+
T Consensus 430 ~--~~~~~~--------~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g--------~-~~~~l~gh~~~V~ 487 (524)
T 2j04_B 430 L--LHGIKN--------SSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVND--------V-SKAKIDAHGINIT 487 (524)
T ss_dssp T--TTCC--------------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC----------------------CCCSCC
T ss_pred h--cccccc--------CccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCC--------c-ceeeecCCCceEE
Confidence 0 000000 000112235789999998875532 22 22233211000 0 1122357999999
Q ss_pred EEEecCCC--CceEEEeeCCCcEEEEecccC
Q psy18091 347 CVAWNPVV--PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 347 ~v~~~p~~--~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|+|.. +..+|+|+.||.||||+++.+
T Consensus 488 ~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 488 CTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred EEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 99999964 358999999999999999876
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5e-38 Score=288.68 Aligned_cols=293 Identities=12% Similarity=0.080 Sum_probs=214.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCC-------cEEEeecccCCCccc-----ceeeeeccCcCceeEEEECCCCCEEEEE---
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK-------NIRLWGKESFGNKFT-----AKAILSDGHQRTIRETAWSPCGNFIASA--- 115 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~-------~v~~W~~~~~~~~~~-----~~~~~~~~h~~~V~~~~~~~~~~~l~s~--- 115 (377)
.||++++|+|||++|++||.|. +|++|++........ ...+...+|...|.+++++ ++.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence 5899999999999999998654 599999864322111 1112235677788887764 4566655
Q ss_pred --------ECCCcEEEEeCCCCc--eEEeEEe-----cCccCCEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeE
Q psy18091 116 --------SFDATTAVWDKRSGQ--FECNATL-----EGHENEVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 116 --------s~d~~i~iwd~~~~~--~~~~~~~-----~~h~~~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~ 178 (377)
+.|+.+++|++..+. ....... ..+...+.+++|+|||+++++++ .|++|++||+++....
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-- 170 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-- 170 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE--
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE--
Confidence 457889999875432 2221111 23445689999999999876554 7899999999876433
Q ss_pred EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---- 254 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---- 254 (377)
..+ .|...|.+++|+|+++++++++.++.+.+|... ... ........|...|.+++|+|++.++++++.|+
T Consensus 171 -~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~-~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 171 -FEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVT-GSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp -EEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTT-CCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred -EEe-CCCCceEEEEEccCCceEEeccceeEEEEEecc-Ccc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 233 367789999999999999999866655555443 222 12234567889999999999999999999887
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLV 334 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~ 334 (377)
.+++|+...... .......+.+| ...|++++|+|++++|++|+.|++|++|+....+ .+
T Consensus 246 ~i~~~~~~~~~~-----------~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~---------~~ 304 (365)
T 4h5i_A 246 VLTKISIKSGNT-----------SVLRSKQVTNR-FKGITSMDVDMKGELAVLASNDNSIALVKLKDLS---------MS 304 (365)
T ss_dssp EEEEEEEETTEE-----------EEEEEEEEESS-CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE---------EE
T ss_pred EEeeccccccee-----------cceeeeeecCC-CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc---------EE
Confidence 578887643211 11123445554 4589999999999999999999999999875432 23
Q ss_pred eccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 335 HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 335 ~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.....+|..+|++|+|+| ++.+|||||.|++|||||++.
T Consensus 305 ~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred EEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 344578999999999999 578999999999999999964
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-37 Score=285.51 Aligned_cols=303 Identities=14% Similarity=0.185 Sum_probs=230.1
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+| ..+....|+|++++|++|+.|+.|++||.... . . .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~--~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 92 KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--L--Q-REIDQAHVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--E--E-EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--c--e-eeecccccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 445555 44555678999999999999999999997631 1 1 1223579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc----------------
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---------------- 187 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---------------- 187 (377)
||+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++............+..
T Consensus 166 wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 243 (420)
T 3vl1_A 166 WSVKDGSN--PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLH 243 (420)
T ss_dssp EETTTCCC--CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCG
T ss_pred EeCCCCcC--ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceee
Confidence 99988754 356788999999999999999999999999999999987643322111112333
Q ss_pred -----ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEee
Q psy18091 188 -----DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKE 261 (377)
Q Consensus 188 -----~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~ 261 (377)
.+.+++|+|+++++++|+.||.|++||++..... ......|...|++++|+|++. +|++++.||.|++||+
T Consensus 244 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 244 EISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT---IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp GGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE---EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred ecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee---EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 3444556788999999999999999999765431 223456888999999999998 9999999999999997
Q ss_pred eCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 262 YKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
...... +..+.+|++..|..+.+ +++++|++++.|+.+++|+............... .....+|
T Consensus 321 ~~~~~~--------------~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~~~~ 384 (420)
T 3vl1_A 321 RSPECP--------------VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFET-PTFLVSN 384 (420)
T ss_dssp TCTTSC--------------SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTS-CEEECCS
T ss_pred CCCcCc--------------hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccC-ccEEccC
Confidence 543221 24455667778888865 4678999999999999999876432211111110 1113468
Q ss_pred ecceeEEEecCCCCc---eEEEeeCCCcEEEEeccc
Q psy18091 342 NQDVNCVAWNPVVPG---MLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~---~laS~s~Dg~i~iWd~~~ 374 (377)
...|.+++|+|+ +. .++++|.+|.+++|++..
T Consensus 385 ~~~v~~~~~s~~-~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 385 DDAVSQFCYVSD-DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SCCCCEEEEECC-SSSSCEEEEEETTTEEEEEESCC
T ss_pred CcceEEEEEccC-CCCcceEEEEcCCceEEEEeccC
Confidence 889999999995 44 466777889999999863
No 47
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=280.99 Aligned_cols=305 Identities=22% Similarity=0.282 Sum_probs=228.8
Q ss_pred cccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceee--------eeccCcCceeEEEECC-CCCEEE
Q psy18091 44 QTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAI--------LSDGHQRTIRETAWSP-CGNFIA 113 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--------~~~~h~~~V~~~~~~~-~~~~l~ 113 (377)
..+++|.+.|++++|+| ++++|++|+.||+|++|+............. ...+|...|.+++|+| ++.+|+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 46788999999999999 9999999999999999998753222111100 0135899999999999 778999
Q ss_pred EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 114 SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
+++.|+.|++||+.+++.... +. +...+.++.|+|. +.++++++.|+.|++||++.... ...+..|...|.
T Consensus 117 s~~~d~~i~iwd~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~v~ 190 (408)
T 4a11_B 117 SSSFDKTLKVWDTNTLQTADV--FN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC---SHILQGHRQEIL 190 (408)
T ss_dssp EEETTSEEEEEETTTTEEEEE--EE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---CEEECCCCSCEE
T ss_pred EEeCCCeEEEeeCCCCcccee--cc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---eeeecCCCCcEE
Confidence 999999999999998865433 22 6778999999984 45999999999999999987643 345678899999
Q ss_pred EEEEeeCCc-EEEEeeCCCcEEEEecCccccccee------------eeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 191 KVRFHPFDN-ILASASYDDTVKLFKEDKAEADWIN------------FATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 191 ~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+++|+|++. ++++++.||.|++||++........ ......|...|.+++|+|++.+|++++.|+.|+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 999999998 5899999999999998765421111 112257889999999999999999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+||+.............. ......+...........++.++.++.+++|+..... .+ ..
T Consensus 271 vwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---------~~-~~ 329 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVC-----------NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---------QI-TM 329 (408)
T ss_dssp EEETTTCCBCCCCCCCCC-----------CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---------EE-EE
T ss_pred EEECCCCccceecccccc-----------ccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---------ce-ee
Confidence 999765433221110000 0000111111122334567777889999999876543 11 22
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
..+|..+|++++|+|+ +.+|++|+.||.|++||++..+
T Consensus 330 ~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 330 LKGHYKTVDCCVFQSN-FQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp ECCCSSCEEEEEEETT-TTEEEEEETTSCEEEEEECC--
T ss_pred eccCCCeEEEEEEcCC-CCEEEEECCCCeEEEEeCCCCC
Confidence 3579999999999994 6789999999999999998653
No 48
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.9e-37 Score=278.04 Aligned_cols=303 Identities=22% Similarity=0.333 Sum_probs=215.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i 121 (377)
..+++|++.|++++|+|++++|++|+.||+|++|+............ ...+|...|.+++|+| ++++|++++.|+.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSD-SWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEE-EEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecc-eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 46789999999999999999999999999999999875332222222 2347999999999999 59999999999999
Q ss_pred EEEeCCCCce-------EEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEE---E-------e
Q psy18091 122 AVWDKRSGQF-------ECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAA---V-------I 182 (377)
Q Consensus 122 ~iwd~~~~~~-------~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~---~-------~ 182 (377)
++||+.+++. .....+.+|...|.+++|+|+ ++++++++.||.|++||++......... . .
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 9999987632 445677889999999999999 9999999999999999998765322111 0 1
Q ss_pred eccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC----CeEEEeeCCCc
Q psy18091 183 NAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG----SRLATCSDDAT 255 (377)
Q Consensus 183 ~~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~~l~s~s~D~~ 255 (377)
..|...+.++.|+|+ +..+++++.++.+.+|+...... .....+.+|...|++++|+|++ .+|++++.|+.
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL--HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE--EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce--eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 256778999999997 89999999999998887664432 2356677899999999999998 79999999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC----CcEEEEEeCCCCCCCcceee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~~~~~~~~~~~~~~~ 331 (377)
|++||+............ ..........+....+..+..+ ..+.+|.. ...
T Consensus 242 i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 296 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEES----------------LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSN---------LQV 296 (351)
T ss_dssp EEEEEEEECC-------------------------------------------------------CCS---------EEE
T ss_pred EEEEeCCCCcCccccCCc----------------ccceeccCCCcccccccccccccccceeeeeccc---------ccc
Confidence 999998754322111000 0011111112222222222222 22222211 111
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
..+ ....+|..+|++++|+|+ +.+|+||+.||.|+|||+...+
T Consensus 297 ~~~-~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELL-SEHDDHNGEVWSVSWNLT-GTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEE-EEECTTSSCEEEEEECSS-SCCEEEEETTSCEEEEEECTTS
T ss_pred cEE-EEEecccccEEEEEEcCC-CCEEEEecCCCcEEEEecCcCc
Confidence 112 234579999999999994 6789999999999999998753
No 49
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.7e-37 Score=278.91 Aligned_cols=252 Identities=21% Similarity=0.339 Sum_probs=209.3
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+..|...|.+++|+|+|++|++|+.|+.|++|++......... .....+|...|.+++|++++. +++++.|+.|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i 166 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTC 166 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEE-EEEEECCSSCEEEEEEEETTE-EEEEETTSCE
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCccee-EEEecCCCccEEEEEECCCCc-EEEEECCCcE
Confidence 34567889999999999999999999999999999998743211111 122357999999999998765 8899999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++|+.|+.|++||++... +...+..|...|.+++|+|++++|
T Consensus 167 ~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 167 ALWDIETGQQ--TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp EEEETTTTEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCcE--EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEcCCCCEE
Confidence 9999998854 46788999999999999999999999999999999998764 345677899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++|+.||.|++||++..... .......+...|++++|+|+|.+|++|+.|+.|++||.... .+
T Consensus 242 ~s~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~~ 304 (340)
T 1got_B 242 ATGSDDATCRLFDLRADQEL--MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---------------DR 304 (340)
T ss_dssp EEEETTSCEEEEETTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---------------CE
T ss_pred EEEcCCCcEEEEECCCCcEE--EEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---------------cE
Confidence 99999999999998765431 11122234457999999999999999999999999996422 23
Q ss_pred EEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 282 VCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 282 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
...+.+|. ..|.+++|+|++.+|++|+.|+.|++|+
T Consensus 305 ~~~~~~h~-~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 305 AGVLAGHD-NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECCS-SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeEeecCC-CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 45666764 5899999999999999999999999994
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-36 Score=283.62 Aligned_cols=283 Identities=22% Similarity=0.407 Sum_probs=226.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.+.++|+++ .+||+| .|++|+|||..+.. . ...+...+|...|++++|+|+|++|++|+.|+.|++||+.+++.
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~--~-~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~- 181 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGD--I-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR- 181 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCC--E-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCC--E-EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE-
Confidence 567999986 477665 59999999987521 1 12222357888999999999999999999999999999998854
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...+.+|...+.++.++ +..+++|+.|+.+++||...... ....+..|...+..+.++|++.++++++.|+.+++
T Consensus 182 -~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~--~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 182 -LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 256 (420)
T ss_dssp -EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccce--eeEEecccccceeeeeecCCCCeeeeeeccccceE
Confidence 46788999999998874 67999999999999999887643 34567789999999999999999999999999999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCC-eEEE--eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s--~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
|+....+.....+.....|...|.+++|+|.+. .+++ |+.|++|++||+... .+...+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~---------------~~~~~~~~-- 319 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG---------------ACLSAVDA-- 319 (420)
T ss_dssp EESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT---------------EEEEEEEC--
T ss_pred EeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc---------------ccceeecc--
Confidence 998866554444566778999999999999765 4444 458999999996422 23444443
Q ss_pred CcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 290 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+..+.|++.++.+++++ .|+.|++|+....+ .+ ....+|..+|++++|+| ++.+|||||.||+|
T Consensus 320 ~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---------~v-~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tv 388 (420)
T 4gga_A 320 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV-AELKGHTSRVLSLTMSP-DGATVASAAADETL 388 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-EEECCCSSCEEEEEECT-TSSCEEEEETTTEE
T ss_pred ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc---------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEecCCeE
Confidence 34788999999998887765 68999999875433 12 22468999999999999 56789999999999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
||||+..
T Consensus 389 riWdv~~ 395 (420)
T 4gga_A 389 RLWRCFE 395 (420)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999863
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-37 Score=280.47 Aligned_cols=261 Identities=23% Similarity=0.400 Sum_probs=206.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCc
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDAT 120 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~ 120 (377)
...+++|.+.|++++|+|++++|++|+.|++|++|+.... .... .....+|...|.+++|+|+ +++|++++.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~--~~~~-~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE--THKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETT--EEEE-EEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCC--ccee-eeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 3568999999999999999999999999999999998621 1111 1223579999999999987 899999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee--
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-- 196 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 196 (377)
|++||+.+++......+..|...|.+++|+|+ ++++++++.|+.|++||++...... ...+..|...+.++.|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC-EEEEECCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee-eEEecCCCCceEEEEEcCcc
Confidence 99999999876667788889999999999999 9999999999999999998764432 234567889999999999
Q ss_pred -----------CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---CCeEEEeeCCCcEEEEeee
Q psy18091 197 -----------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 197 -----------~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~iw~~~ 262 (377)
++.++++++.||.|++||++.....+.....+.+|...|.+++|+|+ +.+|++++.|+.|++||..
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 68999999999999999998665544455677889999999999999 8999999999999999975
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
....... ...... ..+...|..++|+|++.+|++++.||.+++|+
T Consensus 240 ~~~~~~~----------~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 240 NEQGPWK----------KTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp STTSCCE----------EEESSS-SCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred CCCccce----------eeeecc-ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 4321100 000001 11234566666666666666666666666663
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.7e-37 Score=283.63 Aligned_cols=289 Identities=19% Similarity=0.323 Sum_probs=227.7
Q ss_pred cccccCC--EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 46 LKGHQGR--VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 46 l~~h~~~--V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+|... +.++.|++ ..+++++.|++|++|+..+. . ........|...|.+++|+|++++|++|+.||.|++
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~--~--~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~i 160 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSG--S--VSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI 160 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTC--C--EEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCC--c--EeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEE
Confidence 3466655 44566664 56888999999999998742 1 122233458889999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
||+.+++. ...+.+|...|.+++| +++++++++.||.|++||++.... ....+..|...|.+++|+|+++++++
T Consensus 161 wd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s 234 (401)
T 4aez_A 161 YDVESQTK--LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANH--QIGTLQGHSSEVCGLAWRSDGLQLAS 234 (401)
T ss_dssp EETTTCCE--EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EECcCCeE--EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcc--eeeEEcCCCCCeeEEEEcCCCCEEEE
Confidence 99988754 4567799999999999 467999999999999999985443 23456789999999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
|+.||.|++||++.... ...+..|...|.+++|+|++. ++++++ .|+.|++||+... .
T Consensus 235 ~~~d~~v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~---------------~ 295 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG---------------A 295 (401)
T ss_dssp EETTSCEEEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC---------------C
T ss_pred EeCCCeEEEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC---------------C
Confidence 99999999999986543 445678999999999999875 555654 7999999996432 1
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
+...+. +...|..+.|+|++..+++++ .||.+++|+...... . ......+|...|.+++|+| ++.+|
T Consensus 296 ~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~----~----~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 296 RVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL----T----KQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE----E----EEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc----e----eEEEecCCCCCEEEEEECC-CCCEE
Confidence 233333 245799999999999999954 799999998764321 0 1112347899999999999 56789
Q ss_pred EEeeCCCcEEEEecccCC
Q psy18091 359 ASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~~~ 376 (377)
++++.||.|++||+...+
T Consensus 365 ~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 365 STAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECTTSEEEEEECCC--
T ss_pred EEEeCCCcEEEEECCCCc
Confidence 999999999999998653
No 53
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=267.91 Aligned_cols=283 Identities=22% Similarity=0.403 Sum_probs=222.6
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE 132 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 132 (377)
.++++|++++ +||+| .|++|+|||.++.. . ...+...+|...|.+++|+|++++|++|+.|+.|++||+.+++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--~-~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~- 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--I-LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR- 101 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCC--E-EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCC--E-EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee-
Confidence 4679999986 66665 59999999987521 1 12222357888999999999999999999999999999998864
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...+.+|...+.++.+ ++..+++++.++.+++|+...... ....+..|...+..+.+++.++++++++.||.|++
T Consensus 102 -~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 102 -LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH--HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp -EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC--EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCce--eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 4567889998887655 567899999999999999876643 34456789999999999999999999999999999
Q ss_pred EecCcccccceeeeecccCCcceEEEEEcCCCCeE---EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 213 FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL---ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l---~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
||.+..+...........|...|.++++++.+..+ ++++.|++|++|+..... ...... +
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~---------------~~~~~~--~ 239 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA---------------CLSAVD--A 239 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC---------------EEEEEE--C
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc---------------cccccc--c
Confidence 99987655444445566788899999999987643 467889999999853221 111111 2
Q ss_pred CcceeEEEecccCCEEEEEe--CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 290 GRTIYDISWCHLTDLIATAC--GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~--~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
...+..+.|++.++.+++++ .|+.|++|+....+ .+ ....+|..+|++++|+| ++.+|||||.||+|
T Consensus 240 ~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---------~~-~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v 308 (318)
T 4ggc_A 240 HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KV-AELKGHTSRVLSLTMSP-DGATVASAAADETL 308 (318)
T ss_dssp SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EE-EEECCCSSCEEEEEECT-TSSCEEEEETTTEE
T ss_pred eeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---------EE-EEEcCCCCCEEEEEEcC-CCCEEEEEecCCeE
Confidence 45788899999888777655 68999999876543 12 22468999999999999 56789999999999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
+|||+..
T Consensus 309 ~iWd~~~ 315 (318)
T 4ggc_A 309 RLWRCFE 315 (318)
T ss_dssp EEECCSC
T ss_pred EEEECCC
Confidence 9999853
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-36 Score=272.70 Aligned_cols=288 Identities=13% Similarity=0.187 Sum_probs=233.6
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|.++|.+++|+|||++++++..++.+..|.... ....+...+|...|.+++|+|++++|++++ |+.+++||+.+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR-----HARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCS-----EEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCC-----ccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCC
Confidence 567899999999999999998888777774431 122223347999999999999999999998 99999999976
Q ss_pred CceE-EeEE--ecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 129 GQFE-CNAT--LEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 129 ~~~~-~~~~--~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+... .... ..+|...|.+++|+|+++++++++.|+.|++||+..... .....+..|...+.+++|+|+++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP-RIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC---EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc-ceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 5421 1222 237899999999999999999999999999999987643 23445677888999999999999999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++|+++..+. ...+..|...|.+++|+|++.+|++++.|+.|++||+... .....+
T Consensus 161 ~dg~v~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---------------~~~~~~ 221 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTL----VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG---------------RQLQQH 221 (337)
T ss_dssp TTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT---------------EEEEEE
T ss_pred CCCcEEEEeCCCCce----eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC---------------ceEeee
Confidence 999999999876542 4566789999999999999999999999999999996432 122222
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
. +...+..+.|+|+++++++++.++.+++|+...... .....|..+|.+++|+| ++.+|++++.||
T Consensus 222 ~--~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-----------~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg 287 (337)
T 1gxr_A 222 D--FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-----------YQLHLHESCVLSLKFAY-CGKWFVSTGKDN 287 (337)
T ss_dssp E--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-----------EEECCCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred c--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-----------EEEcCCccceeEEEECC-CCCEEEEecCCC
Confidence 2 345799999999999999999999999998765431 11246888999999999 467899999999
Q ss_pred cEEEEecccCC
Q psy18091 366 DVKLWQIKLEN 376 (377)
Q Consensus 366 ~i~iWd~~~~~ 376 (377)
.|++||++..+
T Consensus 288 ~i~~~~~~~~~ 298 (337)
T 1gxr_A 288 LLNAWRTPYGA 298 (337)
T ss_dssp EEEEEETTTCC
T ss_pred cEEEEECCCCe
Confidence 99999998653
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-36 Score=283.85 Aligned_cols=287 Identities=13% Similarity=0.096 Sum_probs=222.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+++++|+|+|++|++++.|++|++||......... ...| ..+....|+|++++|++++.|+.|++||+.+++
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM-----LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT-----SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeE-----EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence 4456899999999999999999999999864221111 1233 344455789999999999999999999998775
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+.... ..+..|...|.+++|+|++++|++++.||.|
T Consensus 131 ~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v 205 (420)
T 3vl1_A 131 Q--REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP---RTLIGHRATVTDIAIIDRGRNVLSASLDGTI 205 (420)
T ss_dssp E--EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC---EEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred e--eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc---eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 4 4566799999999999999999999999999999999876543 4567899999999999999999999999999
Q ss_pred EEEecCcccccceeeeecccCCcce---------------------EEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTV---------------------WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v---------------------~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
++||++..+... .+.....|...| .+++|+|++.+|++++.||.|++||+....
T Consensus 206 ~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---- 280 (420)
T 3vl1_A 206 RLWECGTGTTIH-TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE---- 280 (420)
T ss_dssp EEEETTTTEEEE-EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC----
T ss_pred EEeECCCCceeE-EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc----
Confidence 999987654311 111112333444 445557889999999999999999974321
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
....+...+...|..++|+|++. +|++++.||.+++|+....... +......|..+|+++
T Consensus 281 -----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~--------~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 281 -----------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP--------VGEFLINEGTPINNV 341 (420)
T ss_dssp -----------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC--------SEEEEESTTSCEEEE
T ss_pred -----------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc--------hhhhhccCCCCceEE
Confidence 12333344567899999999998 9999999999999998654321 111122367789999
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.|.+ +.+|++++.||.|++|++..
T Consensus 342 ~~~~--~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 342 YFAA--GALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEET--TEEEEEETTTEEEEEEEECC
T ss_pred EeCC--CCEEEEecCCccEEEEeccC
Confidence 7764 56899999999999999875
No 56
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-36 Score=276.06 Aligned_cols=251 Identities=17% Similarity=0.236 Sum_probs=198.7
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|.+.|++++|+|++.+ ++++.||+|++||+.+...... ......+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 90 ~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~-~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLV-NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CC-CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred cCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEE-EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4578899999999999865 5678899999999875322221 2223357999999999999999999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEE
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILAS 203 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s 203 (377)
+.+++. ...+.+|...|.+++|+|++. ++++++.|+.|++||+++...... .....+...+.+++|+|++ .++++
T Consensus 168 ~~~~~~--~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 168 LSQKAV--LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp TTTTEE--EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred CCCCcE--EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEE
Confidence 998854 467889999999999999875 789999999999999987654322 1233466679999999974 68899
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
|+.|+.|++||++..+. ...+.+|...|++++|+|++ .+|++|+.|++|++||.... +++
T Consensus 245 g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---------------~~~ 305 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---------------EVF 305 (357)
T ss_dssp EESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---------------EEE
T ss_pred eecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---------------cEe
Confidence 99999999999986553 45678899999999999987 57899999999999985321 233
Q ss_pred EeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCC
Q psy18091 283 CTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 283 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
..+ +| ...|++++|+| ++.+|++++.|+.|++|+...+
T Consensus 306 ~~~-~H-~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 306 RDL-SH-RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEC-CC-SSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEC-CC-CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 333 54 56899999998 6789999999999999987543
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.3e-36 Score=281.98 Aligned_cols=286 Identities=25% Similarity=0.441 Sum_probs=230.0
Q ss_pred cccccccCCE-EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V-~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+.+|.+.| .++.+ ++.+|++|+.||+|++||..+. .. . ....+|...|.+++|+|++ +|++|+.|+.|+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--~~--~-~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--KF--L-LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--EE--E-EEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--cE--E-EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 4688998875 66666 5679999999999999998642 11 1 1235799999999999987 999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEc--CCCCEEEEEECCCcEEEEEcCCCCcee--------------------EEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWS--KNGQFLATCSRDKSVWVWEVGEEDEYE--------------------CAA 180 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~~~dg~v~~wd~~~~~~~~--------------------~~~ 180 (377)
+||+.+++ ....+.+|...|.+++|+ ++++++++++.|+.|++||++...... ...
T Consensus 187 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 187 VWDIKKGC--CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEETTTTE--EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEECCCCc--EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 99999885 356788999999999998 577899999999999999998754321 133
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
....|...+.++ +++++++++|+.||.|++||++.... ...+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 265 ~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 265 VLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWD 338 (464)
T ss_dssp EECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred EccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 456777777765 68899999999999999999975443 456788999999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRA 340 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 340 (377)
... ..+...+.+| ...|..+.++ ++++++++.||.+++|+...... . .. ..
T Consensus 339 ~~~---------------~~~~~~~~~h-~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~-----~----~~--~~ 389 (464)
T 3v7d_B 339 LEN---------------GELMYTLQGH-TALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR-----K----FS--YH 389 (464)
T ss_dssp TTT---------------TEEEEEECCC-SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE-----E----EE--EE
T ss_pred CCC---------------CcEEEEEeCC-CCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce-----e----ee--ec
Confidence 642 1456677775 4589999997 57999999999999998765321 1 11 12
Q ss_pred eecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 341 HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 341 h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
|...+..++|+|. +.++++|+ ||.|++||++..+
T Consensus 390 ~~~~~~~~~~~~~-~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 390 HTNLSAITTFYVS-DNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CTTCCCEEEEEEC-SSEEEEEE-TTEEEEEETTTCC
T ss_pred CCCCccEEEEEeC-CCEEEEec-CCeEEEEECCCCc
Confidence 5567888899994 67888888 8999999998754
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=282.53 Aligned_cols=305 Identities=14% Similarity=0.269 Sum_probs=221.9
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-------cccceeeeeccCc------------CceeEEEECCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-------KFTAKAILSDGHQ------------RTIRETAWSPC 108 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-------~~~~~~~~~~~h~------------~~V~~~~~~~~ 108 (377)
.|.+.|++++|+|+|++||+|+.||.|++|+...... .+... ....+|. ..|.+++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVY-STFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEE-EEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEe-cccccccccccccccccccCceEEEEEcCC
Confidence 3678999999999999999999999999999874321 11111 1234787 78999999999
Q ss_pred C--CEEEEEECCCcEEEEeCCCCceE-------------------------------------Ee-EEecCccCCEEEEE
Q psy18091 109 G--NFIASASFDATTAVWDKRSGQFE-------------------------------------CN-ATLEGHENEVKSVT 148 (377)
Q Consensus 109 ~--~~l~s~s~d~~i~iwd~~~~~~~-------------------------------------~~-~~~~~h~~~v~~l~ 148 (377)
+ .+|++++.|+.|++||+.+++.. .. ....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 79999999999999998654321 01 12367999999999
Q ss_pred EcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-------EeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccc
Q psy18091 149 WSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-------VINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 149 ~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~ 220 (377)
|+|++++|++| .|+.|++||++.... +.. .+..|...|.+++|+|++ +++++|+.||.|++||++....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999999998 899999999974322 122 145788899999999998 9999999999999999886543
Q ss_pred cceeeeecccCCc------------ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 221 DWINFATLKSHTS------------TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 221 ~~~~~~~~~~h~~------------~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.......+..|.. .|.+++|+|++.+|++++. +.|++||+...+.. ...+.+|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~--------------~~~~~~~ 326 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP--------------VETYQVH 326 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC--------------SCCEESC
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc--------------cceeecc
Confidence 1111344556665 8999999999999999999 99999997542221 1223333
Q ss_pred CC-----------cc---eeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC-----------cceeee-e---------
Q psy18091 289 HG-----------RT---IYDISWCHLTDLIATACGDDAIRIFKENPEAGDS-----------DMVSFD-L--------- 333 (377)
Q Consensus 289 ~~-----------~~---v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~-----------~~~~~~-~--------- 333 (377)
.. .. +..++|+|++.+|++++.||.|++|+....+... ...... +
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKD 406 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTT
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccc
Confidence 21 11 3349999999999999999999999976543100 000000 0
Q ss_pred -eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 334 -VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 334 -~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.......+...|.+++|+|. +.+||+++.|+ +++|+-+
T Consensus 407 ~~~~~~~~~~~~i~~~~~~p~-~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 407 EISVDSLDFNKKILHTAWHPK-ENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEEGGGCCTTSCCCEEEECSS-SSEEEEECSSC-EEEEECC
T ss_pred cccccccccCCceeEEEECCC-CCEEEEEecce-eeeeccc
Confidence 00001124567999999995 66888888876 8888754
No 59
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-35 Score=265.61 Aligned_cols=250 Identities=23% Similarity=0.484 Sum_probs=207.1
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..+|...|.+++|+|++++|++++.|+.+++|+..+++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc--chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 458999999999999999999999999999999988764 356789999999999999999999999999999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.. +...+..|...+.++.|+|+++++++|+.|+.|++||++.... ...+..|...|.+++|+|++.+|++++.
T Consensus 97 ~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 97 GK---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC----LKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp CC---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred Cc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE----EEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 64 3455778999999999999999999999999999999876543 4567789999999999999999999999
Q ss_pred CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee
Q psy18091 253 DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD 332 (377)
Q Consensus 253 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~ 332 (377)
|+.|++||+... .+...+..++...+..+.|+|+++++++++.|+.+++|+.....
T Consensus 170 d~~i~~wd~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--------- 225 (312)
T 4ery_A 170 DGLCRIWDTASG---------------QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK--------- 225 (312)
T ss_dssp TSCEEEEETTTC---------------CEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE---------
T ss_pred CCcEEEEECCCC---------------ceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------
Confidence 999999996432 12334444456689999999999999999999999999875432
Q ss_pred eeeccccceeccee--EEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 333 LVHTEHRAHNQDVN--CVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 333 ~~~~~~~~h~~~v~--~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+ ....+|...+. ...+++.++.+|++|+.||.|++||++..+
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 226 CL-KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EE-EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC
T ss_pred EE-EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch
Confidence 11 11234544433 234554467789999999999999998654
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-35 Score=313.46 Aligned_cols=305 Identities=23% Similarity=0.382 Sum_probs=240.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+|.+.|++++|+|+|++|++|+.||+|++||..+... .....+|...|.+++|+|++++|++++.|+.|++
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~v 683 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-----LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-----EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEE
Confidence 35789999999999999999999999999999999874211 1123579999999999999999999999999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
||+.+++. ...+.+|...|.+++|+| ++.++++|+.|+.|++||+.+.. +...+..|...|.+++|+|+++++
T Consensus 684 wd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l 758 (1249)
T 3sfz_A 684 WDSATGKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFSPDDELL 758 (1249)
T ss_dssp EETTTCCE--EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS---EEEEECCCSSCEEEEEECSSTTEE
T ss_pred EECCCCce--EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc---hhheecCCCCCEEEEEEecCCCEE
Confidence 99998864 456788999999999999 45689999999999999998764 345567899999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccce---------------------------------------------------eeeeccc
Q psy18091 202 ASASYDDTVKLFKEDKAEADWI---------------------------------------------------NFATLKS 230 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~---------------------------------------------------~~~~~~~ 230 (377)
++++.||.|++||+........ ......+
T Consensus 759 ~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~ 838 (1249)
T 3sfz_A 759 ASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTG 838 (1249)
T ss_dssp EEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECS
T ss_pred EEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCC
Confidence 9999999999999864421100 0001126
Q ss_pred CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
|...|.+++|+|++.++++++.|+.|++|+.... .+...+.+| ...|..+.|+|++..+++++.
T Consensus 839 ~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---------------~~~~~~~~h-~~~v~~v~~spdg~~l~s~s~ 902 (1249)
T 3sfz_A 839 HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---------------LKVADCRGH-LSWVHGVMFSPDGSSFLTASD 902 (1249)
T ss_dssp SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---------------EEEEEECCC-SSCEEEEEECTTSSEEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---------------ceeeecCCC-ccceEEEEECCCCCEEEEEeC
Confidence 7788999999999999999999999999986321 334555565 457889999998889999999
Q ss_pred CCcEEEEEeCCCC-----------------------------------------------------------------CC
Q psy18091 311 DDAIRIFKENPEA-----------------------------------------------------------------GD 325 (377)
Q Consensus 311 d~~i~v~~~~~~~-----------------------------------------------------------------~~ 325 (377)
|+.+++|+..... .+
T Consensus 903 dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~ 982 (1249)
T 3sfz_A 903 DQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED 982 (1249)
T ss_dssp TSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCC
Confidence 9999999743100 00
Q ss_pred Ccceeeee----eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 326 SDMVSFDL----VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 326 ~~~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..+..+++ ......+|..+|++++|+| ++..|+|++.||.|++||++..
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTT
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCC
Confidence 00000100 0112347889999999999 4678999999999999998764
No 61
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.3e-36 Score=300.85 Aligned_cols=295 Identities=18% Similarity=0.266 Sum_probs=239.5
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
..+.+.+|.+.|++++|+|+|++|++|+.||+|++||..+. .. .. ...+|...|.+++|+|++++|++++.|+.|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~-~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VE-VR--SIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EE-EE--EEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ce-EE--EEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 34578999999999999999999999999999999998642 11 11 224799999999999999999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee-CCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP-FDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (377)
++||+.+++. ...+.+|.+.|.+++|+|+++++++++.||.|++||+.... .....+..|...+.++.|+| +++.
T Consensus 80 ~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 80 RVFNYNTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp EEEETTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEEECCSSCEEEEEEETTEEEE
T ss_pred EEEECCCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEEcCCCCcEEEEEEEcCCCCE
Confidence 9999998864 35677899999999999999999999999999999998753 23455678889999999999 7899
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+++++.||.|++|++...... ......|...+..++|+| ++.+|++++.|+.|++||....
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-------------- 218 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-------------- 218 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCS---EEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT--------------
T ss_pred EEEEeCCCeEEEEECCCCcce---eEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC--------------
Confidence 999999999999998765432 122234457899999999 8999999999999999986321
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGML 358 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 358 (377)
.+...+.+| ...|..+.|+|++.++++++.||.+++|+..... .. .....|...|.+++|+|.+...+
T Consensus 219 -~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------~~-~~~~~~~~~v~~~~~~~~~~~~~ 286 (814)
T 3mkq_A 219 -SCVATLEGH-MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---------VE-KTLNVGLERSWCIATHPTGRKNY 286 (814)
T ss_dssp -EEEEEEECC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS---------EE-EEECCSSSSEEEEEECTTCGGGE
T ss_pred -cEEEEEcCC-CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EE-EEeecCCCcEEEEEEccCCCceE
Confidence 345556665 4589999999999999999999999999875432 11 12345778999999999654443
Q ss_pred EEeeCCCcEEEEeccc
Q psy18091 359 ASCSDDGDVKLWQIKL 374 (377)
Q Consensus 359 aS~s~Dg~i~iWd~~~ 374 (377)
+.++.|+.+.+|++..
T Consensus 287 ~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 287 IASGFDNGFTVLSLGN 302 (814)
T ss_dssp EEEEETTEEEEEECSC
T ss_pred EEEEeCCCEEEEEcCC
Confidence 4455567788888764
No 62
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.2e-35 Score=270.01 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=207.6
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
..+..|...|.+++|+|+|.++++|+.|+++++|++..... ..........+|...|.+++|+|++.+|++++.|+.|+
T Consensus 100 ~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~ 179 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCA 179 (354)
T ss_dssp EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEE
Confidence 45667888999999999999999999999999998753211 11111122347999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
+||+.+++. ...+.+|...|.+++|+| ++++|++|+.||.|++||+++.. +...+..|...|++++|+|++++
T Consensus 180 lwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 180 LWDVESGQL--LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp EEETTTCCE--EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSE
T ss_pred EEeCCCCeE--EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEEEEeCCCCE
Confidence 999998864 456789999999999987 46899999999999999998764 44567789999999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.|+.|++||++..... .......+...+.+++|+|++.+|++++.|++|++||.... .
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---------------~ 317 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREV--AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG---------------S 317 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEE--EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---------------S
T ss_pred EEEEeCCCeEEEEECCCCcEE--EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC---------------c
Confidence 999999999999998764321 11122234457899999999999999999999999996432 1
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
++..+.+| ...|..++|+|++.+|++++.|+.+++|+
T Consensus 318 ~~~~l~~h-~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSILFGH-ENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECCC-SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEEECC-CCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 24556665 45899999999999999999999999994
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-35 Score=269.38 Aligned_cols=291 Identities=11% Similarity=0.038 Sum_probs=228.1
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~i 123 (377)
...+|.+.|++++|+|++++|++++.|++|++|+........... ...+|...|.+++|+|+++ +|++++.|+.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL--QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE--EEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce--eeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 456899999999999999999999999999999987532111122 2347899999999999999 9999999999999
Q ss_pred EeC-CCCceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC---------CCceeEEEEeeccccceeE
Q psy18091 124 WDK-RSGQFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE---------EDEYECAAVINAHIQDVKK 191 (377)
Q Consensus 124 wd~-~~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~---------~~~~~~~~~~~~~~~~v~~ 191 (377)
||+ .+++. ..+.+ |...|.+++|+| ++++++++.|+.|++||++. .... ..+. |...+.+
T Consensus 84 wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~-~~~~v~~ 155 (342)
T 1yfq_A 84 VDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS---NNTK-VKNKIFT 155 (342)
T ss_dssp ECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS---SSSS-SCCCEEE
T ss_pred EEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee---eEEe-eCCceEE
Confidence 999 88754 46678 999999999999 99999999999999999875 3221 1122 7788999
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCc-ccccceeeeecccCCcceEEEEEcC-CCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDK-AEADWINFATLKSHTSTVWSLAFDR-IGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
++|+|++ +++++.|+.|++|+++. ..... ......|...|.+++|+| ++.+|++++.||.|++|+....+....
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNG--TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCC--EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccc--eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 9999877 99999999999999986 43211 223456788999999999 999999999999999999754311000
Q ss_pred CCCCCCCCcEEEEEeecCCC--------CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 270 IPTPDNDSVWKCVCTLSGHH--------GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
. .....+.+|. ...|..++|+|++++|++++.||.+++|+..... .+. ...+|
T Consensus 232 ~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---------~~~-~~~~~ 292 (342)
T 1yfq_A 232 S---------SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---------KIK-NFAKF 292 (342)
T ss_dssp C---------TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---------EEE-ECCCC
T ss_pred c---------ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---------Hhh-hhhcc
Confidence 0 0012333332 3489999999999999999999999999875432 122 23466
Q ss_pred -ecceeEEEecCCCCceEEEeeCCCc-EEEEe
Q psy18091 342 -NQDVNCVAWNPVVPGMLASCSDDGD-VKLWQ 371 (377)
Q Consensus 342 -~~~v~~v~~~p~~~~~laS~s~Dg~-i~iWd 371 (377)
..+|++++ | ++.+|++||.||. .+.|.
T Consensus 293 h~~~v~~~~--~-~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 NEDSVVKIA--C-SDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSSEEEEEE--E-CSSEEEEEEECTHHHHCSS
T ss_pred cCCCceEec--C-CCCeEEEEecCCccccccc
Confidence 89999999 7 5678999999999 44433
No 64
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.8e-35 Score=275.11 Aligned_cols=287 Identities=23% Similarity=0.375 Sum_probs=226.6
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..+|...|+++++ +++++++|+.||+|++||..+.. . . ....+|...|.+++| ++++|++|+.||.|++||
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--~--~-~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--C--K-RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD 199 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--E--E-EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--E--E-EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEE
Confidence 3557778999887 78999999999999999987421 1 1 123579999999998 788999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+++. ...+.+|...|.+++|+ +.++++|+.||.|++||++.............|...+.++.+ +++++++|+
T Consensus 200 ~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 200 VNTGEM--LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp SSSCCE--EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred CCCCcE--EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 998864 46678899999999996 458999999999999999887665555667789999999988 688999999
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.||.|++||++.... ...+.+|...|.+++|+ +.++++|+.|+.|++||.... .+...+
T Consensus 274 ~dg~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~---------------~~~~~~ 332 (435)
T 1p22_A 274 GDRTIKVWNTSTCEF----VRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---------------ACLRVL 332 (435)
T ss_dssp TTSEEEEEETTTCCE----EEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CEEEEE
T ss_pred CCCeEEEEECCcCcE----EEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC---------------CEEEEE
Confidence 999999999886543 45677899999999985 689999999999999996432 245666
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.+| ...|..+.+ ++.++++|+.||.|++|+............ ........+|..+|++++|++ ..|+||+.||
T Consensus 333 ~~h-~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~Dg 405 (435)
T 1p22_A 333 EGH-EELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAG-TLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDD 405 (435)
T ss_dssp CCC-SSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTT-TTEEEEECCCSSCCCCEEECS---SCEEECCSSS
T ss_pred eCC-cCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccccc-chheeeccCCCCCeEEEEeCC---CEEEEEeCCC
Confidence 665 458999998 578999999999999999753321100000 001122357999999999953 4789999999
Q ss_pred cEEEEecccC
Q psy18091 366 DVKLWQIKLE 375 (377)
Q Consensus 366 ~i~iWd~~~~ 375 (377)
+|++||+...
T Consensus 406 ~i~iwd~~~~ 415 (435)
T 1p22_A 406 TILIWDFLND 415 (435)
T ss_dssp EEEEEC----
T ss_pred EEEEEECCCC
Confidence 9999999754
No 65
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.2e-35 Score=262.31 Aligned_cols=246 Identities=24% Similarity=0.320 Sum_probs=201.2
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+++|...|++++|+|+|++|++|+.|++|++||+.+. .. .....+|...|.+++|+|++++|++|+.|+.|+
T Consensus 58 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~--~~---~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG--ET---YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132 (319)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EE---EEEEECCSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC--Ce---eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4578999999999999999999999999999999998742 11 112357999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCC------CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~------~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+||+... +...+.+|...|.+++|.|. +..+++++.|+.|++||++.. .....+.+|...|.+++|+|
T Consensus 133 vwd~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 133 VWTIKGQ---CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---QIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp EEETTSC---EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---EEEEEECCCCSCEEEEEECT
T ss_pred EEECCCC---eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---hhheeecCCCCcEEEEEEcC
Confidence 9999754 34567889999999999985 448999999999999999875 33455678999999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
++++|++|+.||.|++||+...+. ...+.. ...|.+++|+|++.+|++++.+ .+++|+.....
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~----~~~~~~-~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~----------- 269 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKA----MYTLSA-QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQY----------- 269 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEE----EEEEEC-CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEE-----------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcE----EEEecC-CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCe-----------
Confidence 999999999999999999986543 233333 4579999999999998887755 59999863211
Q ss_pred CcEEEEEeec-------CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 277 SVWKCVCTLS-------GHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 277 ~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
....+. ..+...+.+++|+|++++|++|+.|+.|++|+..
T Consensus 270 ----~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 270 ----LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp ----EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ----eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 111111 1124568899999999999999999999999864
No 66
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-35 Score=295.69 Aligned_cols=202 Identities=10% Similarity=0.179 Sum_probs=166.2
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..||.+.|++++|+|++++||+|+.||+|++|+.... +......|...|.+++|+| +++|++++.|+.|++||
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLS 85 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEE
Confidence 4689999999999999999999999999999987521 1122335788999999999 88999999999999999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE--------EEeeccccceeEEEEeeC
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA--------AVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~ 197 (377)
+.+++.. ..+. |.+.|.+++|+|+++++++|+.||.|++||++........ .....|...|.+++|+|+
T Consensus 86 ~~~~~~~--~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 86 LYSQKVL--TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp TTTCSEE--EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred CCCCcEE--EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 9988654 3333 6789999999999999999999999999999876421100 112568889999999996
Q ss_pred -CcEEEEeeCCCcEEEEecCcccccceeeeec------------------ccCCcceEEEEEcCCCCeEEEeeCCCcEEE
Q psy18091 198 -DNILASASYDDTVKLFKEDKAEADWINFATL------------------KSHTSTVWSLAFDRIGSRLATCSDDATVKI 258 (377)
Q Consensus 198 -~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~------------------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~i 258 (377)
+..+++|+.||.| +||++.... ...+ ..|...|++++|+|+|.+|++++.|++|++
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred CCCEEEEEeCCCcE-EEECCCCce----EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 4789999999999 999876543 1222 234678999999999999999999999999
Q ss_pred Eeee
Q psy18091 259 WKEY 262 (377)
Q Consensus 259 w~~~ 262 (377)
||..
T Consensus 238 Wd~~ 241 (902)
T 2oaj_A 238 WDAN 241 (902)
T ss_dssp EETT
T ss_pred EECC
Confidence 9964
No 67
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.8e-35 Score=265.49 Aligned_cols=259 Identities=20% Similarity=0.250 Sum_probs=198.1
Q ss_pred ccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEE
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
...+.+|.+.|++++|+|++.++++|+.|++|++||+.+.. . . ....+|...|.+++|+|++++|++++.|+.|+
T Consensus 69 ~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--~-~--~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 69 HKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--T-Y--KRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--E-E--EEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred cchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--E-E--EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 34689999999999999999999999999999999987421 1 1 12347999999999999999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCC----------CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNG----------QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~----------~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
+||+............+|...|.+++|+|++ .++++++.|+.|++||... .....+..|...|.++
T Consensus 144 ~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~----~~~~~~~~h~~~v~~~ 219 (343)
T 2xzm_R 144 LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF----QIRYTFKAHESNVNHL 219 (343)
T ss_dssp EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT----EEEEEEECCSSCEEEE
T ss_pred EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC----ceeEEEcCccccceEE
Confidence 9998744322222233789999999999987 7899999999999999432 2344567899999999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC--CC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--GI 270 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--~~ 270 (377)
+|+|++++|++|+.||.|++||+...... ... ..+...|.+++|+|++.+++ ++.|+.|++|++....... .+
T Consensus 220 ~~s~~g~~l~sgs~dg~v~iwd~~~~~~~---~~~-~~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~ 294 (343)
T 2xzm_R 220 SISPNGKYIATGGKDKKLLIWDILNLTYP---QRE-FDAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTI 294 (343)
T ss_dssp EECTTSSEEEEEETTCEEEEEESSCCSSC---SEE-EECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEEC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCccc---cee-ecCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEe
Confidence 99999999999999999999998533221 111 22455799999999988765 5568889999975432211 00
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
... .... .....+ +...|.+++|+|++.+|++|+.||.|++|+..
T Consensus 295 ~~~-~~~~---~~~~~~-~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 295 EAE-PITK---AEGQKG-KNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp CCC-SGGG---BTTBCC-SCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred ecC-cchh---hhhhcC-CCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 000 0000 000113 34579999999999999999999999999753
No 68
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=299.18 Aligned_cols=321 Identities=12% Similarity=0.164 Sum_probs=218.4
Q ss_pred cccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceee-------------eeccCcCceeEEEECCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAI-------------LSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------------~~~~h~~~V~~~~~~~~~ 109 (377)
..+++|.++|++++|+|+ +.++++|+.|++| +||+............ ....|...|.+++|+|+|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 356889999999999996 4789999999999 9998742110000000 012346789999999999
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEe---c-------------CccCCEEEEEEc----CCC-CEEEEEECC-----C
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATL---E-------------GHENEVKSVTWS----KNG-QFLATCSRD-----K 163 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~-------------~h~~~v~~l~~~----~~~-~~l~s~~~d-----g 163 (377)
++|++++.|+.|++||+.+++......+ . .|..+|.+++|+ |++ ..+++|+.| +
T Consensus 224 ~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~ 303 (902)
T 2oaj_A 224 LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQ 303 (902)
T ss_dssp SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCC
T ss_pred CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCc
Confidence 9999999999999999988865432222 1 134579999995 433 456666554 2
Q ss_pred cEEEEEc-----------------------------------------------------------------------CC
Q psy18091 164 SVWVWEV-----------------------------------------------------------------------GE 172 (377)
Q Consensus 164 ~v~~wd~-----------------------------------------------------------------------~~ 172 (377)
.+++|++ .+
T Consensus 304 ~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~ 383 (902)
T 2oaj_A 304 SLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPS 383 (902)
T ss_dssp CEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTT
T ss_pred eEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCC
Confidence 5666652 11
Q ss_pred CCceeE-----------------EE---------------------EeeccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 173 EDEYEC-----------------AA---------------------VINAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 173 ~~~~~~-----------------~~---------------------~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
+..... .. .+.+|...+..++|+|++++|++|+.|++|++||
T Consensus 384 g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd 463 (902)
T 2oaj_A 384 GIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYD 463 (902)
T ss_dssp CCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEE
T ss_pred CCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEE
Confidence 100000 00 0011122233345568889999999999999999
Q ss_pred cCccccccee-ee-ec-----ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC--------C---------C
Q psy18091 215 EDKAEADWIN-FA-TL-----KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA--------G---------I 270 (377)
Q Consensus 215 ~~~~~~~~~~-~~-~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~--------~---------~ 270 (377)
+......... +. .+ .+|...|++++|+|+|++||+|+.|++|++|+........ . +
T Consensus 464 ~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (902)
T 2oaj_A 464 ASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSL 543 (902)
T ss_dssp SSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCG
T ss_pred CCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccc
Confidence 8765321000 10 11 2788999999999999999999999999999976442100 0 0
Q ss_pred -------------CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 271 -------------PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 271 -------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
..+.....+.+...+.+|. ..|++++|+|++ +|++|+.|++|++|+..... .......+.
T Consensus 544 ~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~-~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~-----~~~~~~~~~ 616 (902)
T 2oaj_A 544 NNTNGVLVDVRDRAPTGVRQGFMPSTAVHANK-GKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA-----IIYMENIRE 616 (902)
T ss_dssp GGSSCSEEECGGGCCTTCSEEEEEEEEECCCS-CSEEEEEECBTS-EEEEEETTSEEEEEETTTTE-----EEEEEEGGG
T ss_pred cCCccccccccccCCCCCCCccceeEEEEcCC-CcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe-----EEEEeehhH
Confidence 0000011246777888864 589999999999 99999999999999964322 111001123
Q ss_pred cc-ceecceeEEEec-----CCC--CceEEEeeCCCcEEEEec
Q psy18091 338 HR-AHNQDVNCVAWN-----PVV--PGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 338 ~~-~h~~~v~~v~~~-----p~~--~~~laS~s~Dg~i~iWd~ 372 (377)
.. +|...|++|+|+ |++ +..|+||+.||+|++||+
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 43 899999999999 843 478999999999999998
No 69
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=267.99 Aligned_cols=294 Identities=17% Similarity=0.261 Sum_probs=221.5
Q ss_pred cccccccccCCEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD 118 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d 118 (377)
....+++|.+.|++++|+|+ |++|++|+.||+|++|+....+... .....+|...|.+++|+|++++|++++.|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 107 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI---PKAQQMHTGPVLDVCWSDDGSKVFTASCD 107 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE---EEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee---EEEeccccCCEEEEEECcCCCEEEEEcCC
Confidence 44578999999999999999 6999999999999999987422211 12235799999999999999999999999
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEE--cCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+.|++||+.+++.. .+.+|..+|.+++| +|++++|++++.|+.|++||++...... .+..+ ..+.++ .+
T Consensus 108 g~v~iwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---~~~~~-~~~~~~--~~ 178 (368)
T 3mmy_A 108 KTAKMWDLSSNQAI---QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM---VLQLP-ERCYCA--DV 178 (368)
T ss_dssp SEEEEEETTTTEEE---EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE---EEECS-SCEEEE--EE
T ss_pred CcEEEEEcCCCCce---eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE---EEecC-CCceEE--Ee
Confidence 99999999988643 24569999999999 8999999999999999999998775433 23333 234444 44
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe----EEEeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR----LATCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----l~s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
....+++++.++.+.+|+.......+........| .+.++.+.+.... +++++.|+.|++|+.......
T Consensus 179 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~----- 251 (368)
T 3mmy_A 179 IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKH--QHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA----- 251 (368)
T ss_dssp ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSS--CEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-----
T ss_pred cCCeeEEEeCCCcEEEEEeccccchhhhccccccC--CCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-----
Confidence 46689999999999999998655433322222333 4455555544443 999999999999997533110
Q ss_pred CCCCCcEEEEEeecCCCC-----------cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 273 PDNDSVWKCVCTLSGHHG-----------RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
.....+.+|.. ..|..++|+|++++|++++.||.|++|+..... .+ ....+|
T Consensus 252 -------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~---------~~-~~~~~~ 314 (368)
T 3mmy_A 252 -------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART---------KL-KTSEQL 314 (368)
T ss_dssp -------HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---------EE-EECCCC
T ss_pred -------ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc---------EE-EEecCC
Confidence 01122333322 269999999999999999999999999876432 11 223578
Q ss_pred ecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 342 NQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
..+|++++|+| ++.+|++||.|+..+.|++
T Consensus 315 ~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 315 DQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp SSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred CCCceEEEECC-CCCeEEEEecccccccccc
Confidence 99999999999 5678999999986665554
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.4e-34 Score=280.02 Aligned_cols=293 Identities=20% Similarity=0.252 Sum_probs=220.2
Q ss_pred cccccccccC---CEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeec---cCcCceeEEEECCCCCEEEE
Q psy18091 42 NSQTLKGHQG---RVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSD---GHQRTIRETAWSPCGNFIAS 114 (377)
Q Consensus 42 ~~~~l~~h~~---~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~---~h~~~V~~~~~~~~~~~l~s 114 (377)
....+.+|.+ .|++++|+|+ +++|++++.|+.|++||..... ....+.. +|...|.+++|+ ++++|++
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE----FLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC----EEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC----EeEEecccccccCCceEEEEEc-CCCEEEE
Confidence 4456788999 9999999999 9999999999999999986421 1112213 789999999999 9999999
Q ss_pred EECCCcEEEEeCCCCceEEeEEecCc----cCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc----
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLEGH----ENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI---- 186 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~---- 186 (377)
++.|+.|++||+.+++.. ..+..+ ...+.++.|. +++++++++.|+.|++||+.... ....+..|.
T Consensus 270 ~~~d~~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~---~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCV--QKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE---VLKTISGHNKGIT 343 (615)
T ss_dssp EETTSEEEEEETTTTEEE--EEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE---EEEEECCCSSCEE
T ss_pred EcCCCcEEEEECCCCcEE--EEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc---EEEEEeCCCCCEE
Confidence 999999999999988654 334444 4678888885 88999999999999999987532 222233333
Q ss_pred -----------------------------cceeEEEEeeCCcEEEEeeCCCcEEEEec----------------------
Q psy18091 187 -----------------------------QDVKKVRFHPFDNILASASYDDTVKLFKE---------------------- 215 (377)
Q Consensus 187 -----------------------------~~v~~~~~~~~~~~l~s~s~dg~i~~~~~---------------------- 215 (377)
..|.++.| +.+..+++++.|+.+++|+.
T Consensus 344 ~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~ 422 (615)
T 1pgu_A 344 ALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 422 (615)
T ss_dssp EEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred EEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence 33334444 22445555555555555543
Q ss_pred ----------------------------------------------------CcccccceeeeecccCCcceEEEEEcCC
Q psy18091 216 ----------------------------------------------------DKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 216 ----------------------------------------------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
..... .. ..+..|...|++++|+|+
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~--~~-~~~~~~~~~v~~~~~s~~ 499 (615)
T 1pgu_A 423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV--SF-DLKTPLRAKPSYISISPS 499 (615)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEE--EE-ECSSCCSSCEEEEEECTT
T ss_pred EeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccc--cc-cccCCccCceEEEEECCC
Confidence 32111 00 455678999999999999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc----------cCCEEEEEeCCCc
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH----------LTDLIATACGDDA 313 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~l~~~~~d~~ 313 (377)
+++|++++.|+.|++|++... .+...+.+.|...|..++|+| ++.+|++++.|+.
T Consensus 500 g~~l~~~~~dg~i~iw~~~~~---------------~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~ 564 (615)
T 1pgu_A 500 ETYIAAGDVMGKILLYDLQSR---------------EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 564 (615)
T ss_dssp SSEEEEEETTSCEEEEETTTT---------------EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC
T ss_pred CCEEEEcCCCCeEEEeeCCCC---------------cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCc
Confidence 999999999999999986422 334455553467899999999 9999999999999
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
|++|+...... ......+|..+|++++|+|+ +. |+|++.||+|++|++..+
T Consensus 565 i~iw~~~~~~~---------~~~~~~~h~~~v~~l~~s~~-~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 565 IFIYSVKRPMK---------IIKALNAHKDGVNNLLWETP-ST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEEESSCTTC---------CEEETTSSTTCEEEEEEEET-TE-EEEEETTSCEEEEEEC--
T ss_pred EEEEECCCCce---------echhhhcCccceEEEEEcCC-CC-eEEecCCceEEEEeeecC
Confidence 99999865421 11224689999999999995 66 999999999999999864
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-34 Score=272.34 Aligned_cols=287 Identities=22% Similarity=0.373 Sum_probs=231.1
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC--CCCCEEEEEECC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFD 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d 118 (377)
.....+.+|.+.|++++|+|++ +|++|+.||+|++||.++. . . .....+|...|.+++|+ ++++++++++.|
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~--~--~-~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d 226 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG--C--C-THVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 226 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT--E--E-EEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC--c--E-EEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence 3445678999999999999988 9999999999999998742 1 1 11235799999999998 577899999999
Q ss_pred CcEEEEeCCCCceE---------------------EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 119 ATTAVWDKRSGQFE---------------------CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 119 ~~i~iwd~~~~~~~---------------------~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
+.|++||+.++... ....+.+|...+.++ +++++++++++.|+.|++||+++..
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~--- 301 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK--- 301 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE---
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc---
Confidence 99999999876422 134677899999887 5678999999999999999998763
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+...+..|...+.++.|+|+++++++|+.||.|++||++.... ...+.+|...|.+++|+ +.+|++++.||.|+
T Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 302 CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIR 375 (464)
T ss_dssp EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE----EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEE
Confidence 4456778999999999999999999999999999999876543 56678899999999998 58999999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+||...... ....++...+..+.+++++.++++++ |+.+++|+....+ ++...
T Consensus 376 vwd~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~---------~~~~~ 428 (464)
T 3v7d_B 376 GWDANDYSR-----------------KFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK---------LVHAN 428 (464)
T ss_dssp EEETTTCCE-----------------EEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC---------EEESC
T ss_pred EEECCCCce-----------------eeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc---------EEehh
Confidence 999753211 11123455677888999999999988 8999999876543 23333
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...|...|.+++|++ ..++++++.||.+.+|-+.
T Consensus 429 ~~~~~~~v~~v~~~~--~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 429 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp TTTTCSEEEEEEEET--TEEEEEEEETTEEEEEEEE
T ss_pred hccCCCcEEEEEecC--CEEEEEEEeCCeEEEEEee
Confidence 456888999999984 5678888889887776554
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-34 Score=267.93 Aligned_cols=245 Identities=28% Similarity=0.410 Sum_probs=197.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
.|++++|+|+|++|++|+.|++|++||.... . ......+|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR--K---IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT--E---EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC--c---EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 4999999999999999999999999998732 1 1122458999999999999999999999999999999998864
Q ss_pred EEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEE----EEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 132 ECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECA----AVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.. .+. +...+.+++|+| +++++++|+.|+.|++||+++....... .....|...|.+++|+|+++++++|+.
T Consensus 200 ~~--~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 200 SL--TLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EE--EEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EE--EEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 32 332 567899999999 8999999999999999999876433221 112468889999999999999999999
Q ss_pred CCcEEEEecCccccc--------ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 207 DDTVKLFKEDKAEAD--------WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 207 dg~i~~~~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
|+.|++||++..... ......+.+|...|.+++|++++.+|++|+.|+.|++||....
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~-------------- 342 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG-------------- 342 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC--------------
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------------
Confidence 999999998753211 1123456789999999999999999999999999999996422
Q ss_pred EEEEEeecCCCCcceeEEEecc------cCCEEEEEeCCCcEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCH------LTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~i~v~~~~ 320 (377)
.++..+.+|. ..|..++|++ ++++|++|+.|+++++|+..
T Consensus 343 -~~~~~l~~h~-~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 343 -NPLLMLQGHR-NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp -CEEEEEECCS-SCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred -eEEEEECCCC-CCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 2345666764 5899998876 56799999999999999764
No 73
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.6e-35 Score=271.18 Aligned_cols=263 Identities=19% Similarity=0.276 Sum_probs=206.2
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc--ccceeeeeccCcCceeEEEECCC-CCEEEEEEC
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK--FTAKAILSDGHQRTIRETAWSPC-GNFIASASF 117 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~--~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~ 117 (377)
.....+++|...|.+++|+|+|++|++|+.|+++++|++...... .........+|...|.+++|+|+ +..|++|+.
T Consensus 99 ~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~ 178 (380)
T 3iz6_a 99 QKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG 178 (380)
T ss_dssp EEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT
T ss_pred ccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC
Confidence 334567899999999999999999999999999999998642111 00111123589999999999996 567999999
Q ss_pred CCcEEEEeCCCCceEEeEE---ecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 118 DATTAVWDKRSGQFECNAT---LEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~---~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|+.|++||+.+++...... ..+|...|.+++|++ ++++|++|+.|++|++||++.... +...+.+|...|.+++
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~--~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR--AVRTYHGHEGDINSVK 256 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC--CCEEECCCSSCCCEEE
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc--ceEEECCcCCCeEEEE
Confidence 9999999999886432211 157999999999987 789999999999999999975432 2345778999999999
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-------cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCC
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-------SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGN 266 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~ 266 (377)
|+|++++|++|+.||.|++||++..... ..+. .+...|++++|+|+|.+|++|+.||.|++||......
T Consensus 257 ~~p~~~~l~s~s~D~~i~lwd~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 257 FFPDGQRFGTGSDDGTCRLFDMRTGHQL----QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ECTTSSEEEEECSSSCEEEEETTTTEEE----EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred EecCCCeEEEEcCCCeEEEEECCCCcEE----EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 9999999999999999999999865431 1222 2234589999999999999999999999999643211
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
...+..+...|...|.+++|+|++.+|++|+.|+.+++|+...
T Consensus 333 ------------~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 333 ------------VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ------------EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ------------EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0111111223456899999999999999999999999998643
No 74
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.1e-34 Score=267.41 Aligned_cols=283 Identities=25% Similarity=0.460 Sum_probs=225.6
Q ss_pred cccccccccCCE-EEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc
Q psy18091 42 NSQTLKGHQGRV-WNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT 120 (377)
Q Consensus 42 ~~~~l~~h~~~V-~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~ 120 (377)
....+.+|.+.| .++ .++|++|++|+.||+|++||..+.. . . ....+|...|.+++|+ ++++++|+.|+.
T Consensus 110 ~~~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~--~--~-~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGK--C--L-RTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CCEEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCC--E--E-EECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred eeEEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCc--E--E-EEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 445789999875 554 4568999999999999999987421 1 1 1235799999999997 679999999999
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
|++||+.+++. ...+.+|...|.++.|+ ++++++|+.||.|++||+.+... ...+..|...+.++.+ ++++
T Consensus 181 i~vwd~~~~~~--~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~v~~~~~--~~~~ 251 (445)
T 2ovr_B 181 LKVWNAETGEC--IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQC---LHVLMGHVAAVRCVQY--DGRR 251 (445)
T ss_dssp EEEEETTTTEE--EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCE---EEEEECCSSCEEEEEE--CSSC
T ss_pred EEEEECCcCcE--EEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcE---EEEEcCCcccEEEEEE--CCCE
Confidence 99999998854 46778999999999995 56899999999999999987643 3456788899999988 6889
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||.|++||.+.... ...+.+|...|.+++| ++.++++++.|+.|++||.... .
T Consensus 252 l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~---------------~ 310 (445)
T 2ovr_B 252 VVSGAYDFMVKVWDPETETC----LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETG---------------N 310 (445)
T ss_dssp EEEEETTSCEEEEEGGGTEE----EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTC---------------C
T ss_pred EEEEcCCCEEEEEECCCCcE----eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCC---------------C
Confidence 99999999999999876542 4567789999999999 6889999999999999996432 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS 360 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS 360 (377)
+...+.+|. ..+..+.+ .++++++++.||.+++|+...... .. .......|..+|++++|++ .+|++
T Consensus 311 ~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~-----~~--~~~~~~~~~~~v~~~~~~~---~~l~s 377 (445)
T 2ovr_B 311 CIHTLTGHQ-SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQC-----LQ--TLQGPNKHQSAVTCLQFNK---NFVIT 377 (445)
T ss_dssp EEEEECCCC-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE-----EE--EECSTTSCSSCEEEEEECS---SEEEE
T ss_pred EEEEEcCCc-ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcE-----EE--EEccCCCCCCCEEEEEECC---CEEEE
Confidence 345566653 46777766 467999999999999998754331 10 1112235889999999985 38999
Q ss_pred eeCCCcEEEEecccCC
Q psy18091 361 CSDDGDVKLWQIKLEN 376 (377)
Q Consensus 361 ~s~Dg~i~iWd~~~~~ 376 (377)
|+.||.|++||++..+
T Consensus 378 ~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 378 SSDDGTVKLWDLKTGE 393 (445)
T ss_dssp EETTSEEEEEETTTCC
T ss_pred EeCCCeEEEEECCCCc
Confidence 9999999999998653
No 75
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-35 Score=291.70 Aligned_cols=216 Identities=25% Similarity=0.427 Sum_probs=182.8
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d~~i 121 (377)
..+.||.+.|++++|+|+|++|++|+.||+|++|+... ..... .....+|...|.+++|+|+ +++|++|+.||.|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~--~~~~~-~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEG--ETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEET--TEEEE-EEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCC--CCCcc-ceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46899999999999999999999999999999999862 11111 1223579999999999987 9999999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee---
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP--- 196 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 196 (377)
++||+.+++......+.+|...|.+++|+|+ ++++++|+.||.|++||++...... ......|...+.++.|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC-
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCccc
Confidence 9999998876677788899999999999999 9999999999999999998764332 234567889999999999
Q ss_pred ----------CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC---CCeEEEeeCCCcEEEEeeeC
Q psy18091 197 ----------FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI---GSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 197 ----------~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~iw~~~~ 263 (377)
++.++++|+.||.|++||++.....+.....+.+|...|++++|+|+ +.+|++++.||.|++||...
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 58999999999999999998665444455677899999999999999 89999999999999999754
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-34 Score=304.55 Aligned_cols=310 Identities=23% Similarity=0.399 Sum_probs=242.5
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDA 119 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~ 119 (377)
....+.+|.+.|++++|+|+|++|++|+.|++|++||..+. .. . ....+|...|.+++|+| ++.++++|+.|+
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--~~--~-~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--KL--V-HTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CE--E-EEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--ce--E-EEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 34567899999999999999999999999999999998742 11 1 12347999999999999 456899999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE---------------------
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC--------------------- 178 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~--------------------- 178 (377)
.|++||+.+++. ...+.+|.+.|.+++|+|+++++++++.||.|++||+........
T Consensus 724 ~v~vwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 801 (1249)
T 3sfz_A 724 FLKLWDLNQKEC--RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIV 801 (1249)
T ss_dssp CEEEEETTSSSE--EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCB
T ss_pred eEEEEECCCcch--hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceE
Confidence 999999998864 456789999999999999999999999999999999865422111
Q ss_pred -------------------------------EEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeee
Q psy18091 179 -------------------------------AAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFAT 227 (377)
Q Consensus 179 -------------------------------~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~ 227 (377)
......|...+.+++|+|++.++++++.||.|++|+...... ...
T Consensus 802 ~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~----~~~ 877 (1249)
T 3sfz_A 802 KCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK----VAD 877 (1249)
T ss_dssp CCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE----EEE
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce----eee
Confidence 011126777899999999999999999999999999876442 466
Q ss_pred cccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC-------------------------------------
Q psy18091 228 LKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI------------------------------------- 270 (377)
Q Consensus 228 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~------------------------------------- 270 (377)
+.+|...|++++|+|+|.+|++++.|+.|++|+..........
T Consensus 878 ~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 957 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQID 957 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEE
T ss_pred cCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEE
Confidence 7899999999999999999999999999999985421000000
Q ss_pred -----------CCCCCC--------C--------cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 271 -----------PTPDND--------S--------VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 271 -----------~~~~~~--------~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
..|... . .......+.+| ...|..++|+|+++++++++.|+.+++|+.....
T Consensus 958 ~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 958 YLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH-KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp EECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC-SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE
T ss_pred EcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC-CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 000000 0 00112233343 4589999999999999999999999999876532
Q ss_pred CCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 324 GDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 324 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.. ...+|...|.+++|+| ++ .+++++.||.|++||+...+
T Consensus 1037 ---------~~--~~~~~~~~v~~~~~~~-~~-~l~~~~~dg~v~vwd~~~~~ 1076 (1249)
T 3sfz_A 1037 ---------YV--FLQAHQETVKDFRLLQ-DS-RLLSWSFDGTVKVWNVITGR 1076 (1249)
T ss_dssp ---------EE--CCBCCSSCEEEEEECS-SS-EEEEEESSSEEEEEETTTTC
T ss_pred ---------eE--EEecCCCcEEEEEEcC-CC-cEEEEECCCcEEEEECCCCc
Confidence 11 1246889999999999 44 57899999999999997653
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6e-34 Score=278.31 Aligned_cols=252 Identities=17% Similarity=0.263 Sum_probs=203.8
Q ss_pred ccccccccccCC-EEEEEECC--CCCEEEEEeCCCcEEEeecccCCC----cccceeeeeccCcCceeEEEECCCCCEEE
Q psy18091 41 INSQTLKGHQGR-VWNVSWNP--QGTMISSCGEDKNIRLWGKESFGN----KFTAKAILSDGHQRTIRETAWSPCGNFIA 113 (377)
Q Consensus 41 ~~~~~l~~h~~~-V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~----~~~~~~~~~~~h~~~V~~~~~~~~~~~l~ 113 (377)
.....+.+|.+. |++++|+| ++++|++|+.||+|++||...... .... ......|...|.+++|+|++++|+
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV-KSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEE-EEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccc-cchhhcccccEEEEEEeCCCCEEE
Confidence 345678999999 99999999 999999999999999999853100 0111 112346889999999999999999
Q ss_pred EEECC----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeecccc-
Q psy18091 114 SASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ- 187 (377)
Q Consensus 114 s~s~d----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~- 187 (377)
+++.+ +.|.+||. ++ ....+.+|...|.+++|+|+++ .+++++.|+.|++||+... .+...+..|..
T Consensus 133 ~~~~~~~~~~~v~~~d~--~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~---~~~~~~~~~~~~ 205 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWDS--GN--SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF---KFSASDRTHHKQ 205 (615)
T ss_dssp EEECCSSCSEEEEETTT--CC--EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB---EEEEEECSSSCT
T ss_pred EeccCCCCccEEEEEEC--CC--cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc---ceeeeecccCCC
Confidence 99988 68999983 32 3456789999999999999997 7999999999999998765 34456777888
Q ss_pred --ceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeec-c---cCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 188 --DVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATL-K---SHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 188 --~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.+++|+|+ ++++++++.||.|++||+...+. ...+ . .|...|.+++|+ ++.+|++++.|+.|++||
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd 280 (615)
T 1pgu_A 206 GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWD 280 (615)
T ss_dssp TCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEE
T ss_pred CceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE----eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEE
Confidence 8999999999 99999999999999999876543 3444 4 899999999999 999999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCC---CCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGH---HGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.... .+...+..+ ....+..+.|. .++.+++++.|+.+++|+...
T Consensus 281 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 281 VTTS---------------KCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp TTTT---------------EEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE
T ss_pred CCCC---------------cEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC
Confidence 6422 223344333 23467777775 788999999999999998643
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4e-33 Score=262.71 Aligned_cols=288 Identities=24% Similarity=0.383 Sum_probs=231.2
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+.+|.+.|++++|+ +.++++|+.|++|++||..+. .. . ....+|...|.+++|+ ++++++|+.|+.|
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--~~--~-~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i 221 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--EC--I-HTLYGHTSTVRCMHLH--EKRVVSGSRDATL 221 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--EE--E-EEECCCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--cE--E-EEECCCCCcEEEEEec--CCEEEEEeCCCEE
Confidence 345688999999999998 679999999999999998742 11 1 1235799999999995 5789999999999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
++||+.+++. ...+.+|...|.+++| +++++++|+.||.|++||+++.. +...+..|...+.++.+ ++.++
T Consensus 222 ~~wd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 222 RVWDIETGQC--LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET---CLHTLQGHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp EEEESSSCCE--EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE---EEEEECCCSSCEEEEEE--CSSEE
T ss_pred EEEECCCCcE--EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc---EeEEecCCCCceEEEEE--CCCEE
Confidence 9999988764 4567789999999999 78899999999999999998763 44556788899999988 78999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
++++.||.|++||++.... ...+.+|...+.++.++ +.+|++++.||.|++||.... .+
T Consensus 293 ~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~---------------~~ 351 (445)
T 2ovr_B 293 VSGSLDTSIRVWDVETGNC----IHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTG---------------QC 351 (445)
T ss_dssp EEEETTSCEEEEETTTCCE----EEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTC---------------CE
T ss_pred EEEeCCCeEEEEECCCCCE----EEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCC---------------cE
Confidence 9999999999999976543 45677899999988875 679999999999999996432 12
Q ss_pred EEeecC--CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 282 VCTLSG--HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 282 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
...+.+ .+...|..++|+ ++++++++.||.+++|+....+.. ..+......+|...|++++|+| ++.++|
T Consensus 352 ~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~-~~~~la 423 (445)
T 2ovr_B 352 LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFI-----RNLVTLESGGSGGVVWRIRASN-TKLVCA 423 (445)
T ss_dssp EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE-----EEEEECTTGGGTCEEEEEEECS-SEEEEE
T ss_pred EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCcee-----eeeeccccCCCCceEEEEEecC-CEEEEE
Confidence 344443 145689999986 579999999999999997654311 1111111246788999999999 578899
Q ss_pred EeeCCCc----EEEEecccCC
Q psy18091 360 SCSDDGD----VKLWQIKLEN 376 (377)
Q Consensus 360 S~s~Dg~----i~iWd~~~~~ 376 (377)
+|+.||+ |.+||++.+.
T Consensus 424 ~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 424 VGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EECSSSSSCCEEEEEECCCCC
T ss_pred EcccCCCCccEEEEEECCCCC
Confidence 9999998 9999998753
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-35 Score=273.77 Aligned_cols=268 Identities=10% Similarity=0.110 Sum_probs=206.2
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...|.+++|+|||+++||++.|++|+ |.... +.+ .+|...|.+++|+|+| .++.+.+|+.+..
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~------~~l--~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA------KDI--NCNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC------SCC--SSBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc------cee--cCCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 47899999999999999999999999 64321 111 5899999999999998 5666666665433
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-----ceeEEEEeeCCcEEEEe
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHPFDNILASA 204 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~ 204 (377)
.. ..+ .|...|.+++|+|+|..+++++.||.|++||... +...+. |.. .+.+++|+|+|++|++|
T Consensus 78 ~~---~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 78 GL---LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp CS---STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred eE---eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEEcCCCCEEEEE
Confidence 21 111 4578999999999999999999999999999543 334445 554 49999999999999999
Q ss_pred eCCCcEEEEecCcccc---cceeeeec----ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 205 SYDDTVKLFKEDKAEA---DWINFATL----KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~---~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
+.||+|++|+...... .+..+..+ .+|...|.+++|+|+| +++++.|++|++|+.......
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~---------- 215 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ---------- 215 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC----------
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc----------
Confidence 9999999999876531 11223443 6788899999999999 889999999999997543210
Q ss_pred cEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe--cCCCC
Q psy18091 278 VWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW--NPVVP 355 (377)
Q Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~ 355 (377)
...+++..+|...|.+++|+ ++.|++++ +++|++|+..... ......+|...|..++| +| ++
T Consensus 216 --~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~----------~~~~~~gh~~~V~~va~~~s~-d~ 279 (588)
T 2j04_A 216 --PVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS----------ISSLKTGSLENFHIIPLNHEK-ES 279 (588)
T ss_dssp --CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE----------EEEEECSCCSCCCEEEETTCS-SC
T ss_pred --cceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe----------EEEEEcCCCceEEEEEeeeCC-CC
Confidence 01234432345689999998 58899887 6999999876432 10112379999999999 99 56
Q ss_pred ceEEEeeCCCcEEEEecc
Q psy18091 356 GMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 356 ~~laS~s~Dg~i~iWd~~ 373 (377)
..|+++++||+ |+|...
T Consensus 280 ~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEECSSCEE-EEEESS
T ss_pred CEEEEEcCCCC-EEEeec
Confidence 78999999999 999874
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.6e-34 Score=267.19 Aligned_cols=293 Identities=20% Similarity=0.289 Sum_probs=224.1
Q ss_pred CCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++++|+... +++++.||.|++|+....+..... .....+|...|.+++|+| ++++|++|+.|+.|++||+.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKN-VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTT-CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCC-CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 34456888988754 456899999999998642211111 112357999999999999 899999999999999999987
Q ss_pred Cce-----EEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEEe--eccccceeEEEEeeCCcE
Q psy18091 129 GQF-----ECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAVI--NAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 129 ~~~-----~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 200 (377)
+.. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++.. +...+ ..|...|.+++|+|++++
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA---AVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE---EEEEECTTTCCSCEEEEEECTTSSC
T ss_pred CCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC---ccEEEecCCCCCceEEEEECCCCCE
Confidence 643 3456778999999999999998 699999999999999998763 33455 678899999999999999
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeec-ccCCcc-eEEEEEcCCCCeEEEe---eCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATL-KSHTST-VWSLAFDRIGSRLATC---SDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~---s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
|++++.||.|++||++.... ...+ ..|... +.+++|+|++.+|++| +.|+.|++||........
T Consensus 191 l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~------- 259 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL------- 259 (402)
T ss_dssp EEEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-------
T ss_pred EEEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-------
Confidence 99999999999999886543 3344 567665 8899999999999999 799999999975432211
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEE-EeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-ACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
......+...+..+.|+|+++.+++ ++.|+.|++|+....... .. .+. .+ .|..+|.+++|+|.
T Consensus 260 -------~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~--~~---~l~-~~-~~~~~v~~~~~sp~- 324 (402)
T 2aq5_A 260 -------SLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF--LH---YLS-MF-SSKESQRGMGYMPK- 324 (402)
T ss_dssp -------EEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC--EE---EEE-EE-CCSSCCSEEEECCG-
T ss_pred -------eEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc--eE---eec-cc-ccCCcccceEEecc-
Confidence 1111123457899999999998865 557999999998754321 11 111 11 25689999999994
Q ss_pred CceEEEeeCCCcEEEEecccC
Q psy18091 355 PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.++++ .|+.+++|++...
T Consensus 325 ~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 325 RGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp GGSCGG--GTEEEEEEEEETT
T ss_pred ccccee--cceeEEEEEcCCC
Confidence 556654 5679999998754
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.8e-35 Score=267.66 Aligned_cols=268 Identities=15% Similarity=0.211 Sum_probs=204.6
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.+...|.+++|+|++++|++++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.|+.|++||+....
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 35678999999999999999999999999999887555667788999999999999999999999999999999998765
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.......+..|...|.+++|+|++++|++++.|+.|++|+++.... +.....+.. |...|++++|+|++.+|++++.|
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc-ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 3334455678999999999999999999999999999999876542 122345556 99999999999999999999999
Q ss_pred CcEEEEeeeCCCCCCCCC-C--CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCccee
Q psy18091 254 ATVKIWKEYKPGNSAGIP-T--PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVS 330 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~ 330 (377)
++|++||+.......... . ........+...+ + |...|..++|+|++++|++++.|+.|++|+........
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~---- 241 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP---- 241 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE----
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc----
Confidence 999999985332211110 0 0111234566666 4 46689999999999999999999999999987654210
Q ss_pred eeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 331 FDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 331 ~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. ......+|..+|.+++|+| ++.+|++|++|+.+ +|+..
T Consensus 242 -~-~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 242 -R-ALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -E-ECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred -e-eeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 0 0122357889999999999 57788888877766 66654
No 82
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=283.96 Aligned_cols=269 Identities=12% Similarity=0.145 Sum_probs=194.8
Q ss_pred ccCCEEEEEECCCC---------CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 49 HQGRVWNVSWNPQG---------TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 49 h~~~V~~v~~~~~g---------~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
+.+.|++++|+|++ ++||+|+.++.. ...+|+++.+++++.|+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~----------------------------~~~~~~~~~laS~s~D~ 183 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD----------------------------EPLNEHLEMFDKEKHSS 183 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC----------------------------------------------CE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC----------------------------CccchhhhhhccCCCCc
Confidence 46789999999886 788888865310 01368899999999999
Q ss_pred cEEEEeCCCCceEE--eEEecCccCCEEEEEEcCC------CCEEEEEECCCcEEEEEcCCCCce--------eEEEEee
Q psy18091 120 TTAVWDKRSGQFEC--NATLEGHENEVKSVTWSKN------GQFLATCSRDKSVWVWEVGEEDEY--------ECAAVIN 183 (377)
Q Consensus 120 ~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~~~~~------~~~l~s~~~dg~v~~wd~~~~~~~--------~~~~~~~ 183 (377)
.|+|||+.+++... ...+.+|.+.|.+++|+|+ +.+|++++.||+|++||+...... .....+.
T Consensus 184 tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~ 263 (524)
T 2j04_B 184 CIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS 263 (524)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC
T ss_pred eEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE
Confidence 99999987765322 2345678899999999996 579999999999999999765321 1123466
Q ss_pred ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEE--EEcCCC-CeEEEeeCCCcEEEEe
Q psy18091 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSL--AFDRIG-SRLATCSDDATVKIWK 260 (377)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~l~s~s~D~~i~iw~ 260 (377)
.|...|.+++|+|. ..|++|+.||+|++||++.... ....+.+|...|+++ +|++++ .+|||+|.|++|++||
T Consensus 264 ~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 264 LADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp CTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred cCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 78899999999985 5899999999999999975432 234567899999999 578887 8999999999999999
Q ss_pred eeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 261 EYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
+.... +...+.+|.. ..|..++|+|++..+++++.|+++++|+...... +.. ..
T Consensus 340 ~~~~~---------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~---------~~~-l~ 394 (524)
T 2j04_B 340 PKDIA---------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA---------VHP-LV 394 (524)
T ss_dssp GGGHH---------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC---------CEE-EE
T ss_pred CCCCC---------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc---------cee-ee
Confidence 75321 1122333332 2478899999999999999999999998754321 111 24
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|...|++|+|+|+ +..|+|||.||+|+|||+...
T Consensus 395 gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 395 SRETTITAIGVSRL-HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp ECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSS
T ss_pred cCCCceEEEEeCCC-CCeEEEEECCCEEEEEechHh
Confidence 69999999999995 668999999999999998653
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-33 Score=256.69 Aligned_cols=266 Identities=17% Similarity=0.198 Sum_probs=211.8
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.|...|.+++|+|++++|++++.|+.|++||+.+++......+.+|...|.+++|+|+++++++++.|+.|++||+....
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 48899999999999999999999999999999988755677888999999999999999999999999999999997654
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
. ........|...+.+++|+|+++++++++.||.|++|++...............|...|.+++|+|++.+|++++.|+
T Consensus 86 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 86 W-KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp E-EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred e-eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 2 222334668889999999999999999999999999998765532222233467899999999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCC---CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 255 TVKIWKEYKPGNSAGIPT---PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.|++||+........... ........+...+.+| ...|..+.|+|++++|++++.|+.+++|+.....
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------- 235 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM-------- 235 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--------
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--------
Confidence 999999753221111000 0001122345556554 5589999999999999999999999999876443
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.+ .....|..+|++++|+| ++.+|++| .||.|++|+++.
T Consensus 236 -~~-~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 236 -AV-ATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp -EE-EEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred -ee-EEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 11 12246788999999999 46677766 999999999976
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-33 Score=264.28 Aligned_cols=272 Identities=22% Similarity=0.456 Sum_probs=210.6
Q ss_pred ccccccCCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCc------ccceeeeeccCcCceeEEEECCCCC-EEEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNK------FTAKAILSDGHQRTIRETAWSPCGN-FIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s 116 (377)
.+.+|.+.|++++|+|+ +.+|++++.||+|++|++...... ... .....+|...|.+++|+|++. +|++|+
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQP-DLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCC-SEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCC-cEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 45679999999999997 689999999999999998742100 111 122347999999999999988 999999
Q ss_pred CCCcEEEEeCCCCc-----eEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 117 FDATTAVWDKRSGQ-----FECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 117 ~d~~i~iwd~~~~~-----~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
.||.|++||+..+. ......+.+|...|.+++|+| ++.+|++++.|+.|++||++..........+..|...++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 99999999998632 122456778999999999999 678899999999999999987642233445668899999
Q ss_pred EEEEeeCCc-EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 191 KVRFHPFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 191 ~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+++|+|++. ++++|+.||.|++||++.... .+..+..|...|++++|+|++. +|++++.|+.|++||+.......
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 999999986 689999999999999986432 2456678999999999999985 68999999999999976432211
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
.. . . . .++ ... +...+.+|...|+++
T Consensus 359 ~~-------------------~-~-------~---------~~~------------~~~------~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 359 ST-------------------E-D-------A---------EDG------------PPE------LLFIHGGHTAKISDF 384 (430)
T ss_dssp CH-------------------H-H-------H---------HHC------------CTT------EEEECCCCSSCEEEE
T ss_pred Cc-------------------c-c-------c---------ccC------------Ccc------eEEEcCCCCCCceEE
Confidence 00 0 0 0 000 000 111235788899999
Q ss_pred EecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+|+|.++.+|+|++.||.|+||++..
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EECCCCCCEEEEEECCCCEEEeEccc
Confidence 99997655899999999999999864
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.7e-32 Score=245.39 Aligned_cols=248 Identities=22% Similarity=0.299 Sum_probs=201.7
Q ss_pred eccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCc---eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEE
Q psy18091 93 SDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVW 168 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~w 168 (377)
..||.+.|++++|+|+ +++|+||+.|++|+|||+.+++ ..+...+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 3589999999999997 6899999999999999987543 23456788999999999999999999999999999999
Q ss_pred EcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--Ce
Q psy18091 169 EVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SR 246 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~ 246 (377)
+...... ......+...+..+.+++.++++++++.|+.+++|+...... ......+|...+..++|++++ .+
T Consensus 114 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 114 DLTTGTT---TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCK---YTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp ETTTTEE---EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE---EEECSSSCSSCEEEEEECSCSSSCE
T ss_pred eecccce---eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCce---EEEEeccccCcccceEEccCCCCcE
Confidence 9877643 334456667788889999999999999999999999865432 234567899999999998865 57
Q ss_pred EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCC
Q psy18091 247 LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDS 326 (377)
Q Consensus 247 l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~ 326 (377)
+++++.|+.|++||.... .+...+.+| ...|++++|+|++++|++++.|+.+++|+.....
T Consensus 188 ~~s~~~d~~i~i~d~~~~---------------~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--- 248 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANC---------------KLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--- 248 (340)
T ss_dssp EEEEETTSCEEEEETTTT---------------EEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE---
T ss_pred EEEEcCCCEEEEEECCCC---------------ceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc---
Confidence 889999999999986422 345666665 4589999999999999999999999999876432
Q ss_pred cceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.. . .+...|.+++|+|. + .+++++.|+.|+|||++..
T Consensus 249 ------~~~~-~-~~~~~v~~~~~~~~-~-~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 249 ------HLYT-L-DGGDIINALCFSPN-R-YWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp ------EEEE-E-ECSSCEEEEEECSS-S-SEEEEEETTEEEEEETTTT
T ss_pred ------eeee-e-cCCceEEeeecCCC-C-ceeeccCCCEEEEEECCCC
Confidence 1111 1 23458999999994 4 4667888999999998754
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.1e-32 Score=278.46 Aligned_cols=312 Identities=20% Similarity=0.240 Sum_probs=233.2
Q ss_pred eeeecccccccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE
Q psy18091 32 LILCSRCEMINSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF 111 (377)
Q Consensus 32 ~~~~~~~~~~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~ 111 (377)
|.+|..-.......+.+|.++|++++|+|++++|++|+.||+|++||..+.. . .....+|...|.+++|+|++++
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~---~~~~~~~~~~v~~~~~s~~~~~ 111 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--K---VVDFEAHPDYIRSIAVHPTKPY 111 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--E---EEEEECCSSCEEEEEECSSSSE
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--E---EEEEecCCCCEEEEEEeCCCCE
Confidence 4444432333445788999999999999999999999999999999987421 1 1122479999999999999999
Q ss_pred EEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee
Q psy18091 112 IASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK 190 (377)
Q Consensus 112 l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~ 190 (377)
|++++.|+.|++||+.++. .....+.+|...|.+++|+| +++.+++++.||.|++||+....... .....+...+.
T Consensus 112 l~~~~~dg~i~vw~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~--~~~~~~~~~v~ 188 (814)
T 3mkq_A 112 VLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF--TLTTGQERGVN 188 (814)
T ss_dssp EEEEETTSEEEEEEGGGTS-EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE--EEECCCTTCCC
T ss_pred EEEEcCCCEEEEEECCCCc-eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee--EEecCCCCCEE
Confidence 9999999999999998763 23456778999999999999 88899999999999999997765432 22234447899
Q ss_pred EEEEee--CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 191 KVRFHP--FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 191 ~~~~~~--~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
.+.|+| ++.++++++.||.|++|+...... ...+.+|...|.+++|+|++.+|++++.||.|++||....
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---- 260 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSC----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---- 260 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC----
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC----
Confidence 999999 899999999999999999875542 4566789999999999999999999999999999986421
Q ss_pred CCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeCCCCCCCcc------ee-----------
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKENPEAGDSDM------VS----------- 330 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~~~~~~~~~------~~----------- 330 (377)
.+...+..+ ...+..++|+|++. .+++++.++.+.+|+.........+ ..
T Consensus 261 -----------~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 328 (814)
T 3mkq_A 261 -----------KVEKTLNVG-LERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDI 328 (814)
T ss_dssp -----------SEEEEECCS-SSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCE
T ss_pred -----------cEEEEeecC-CCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceee
Confidence 123444443 45899999999876 3344555667777775432110000 00
Q ss_pred e----------------eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 331 F----------------DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 331 ~----------------~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. .........|...+.+++|+| ++.++++++ ||.+++|++.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 329 FTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSP-NGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp EEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECT-TSSEEEEEE-TTEEEEEETT
T ss_pred eeeecccccccccCccceeeeecCCCCccCCceeEECC-CCCEEEEec-CCEEEEEECc
Confidence 0 000000123445678888888 466777777 7888888865
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-33 Score=256.74 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=192.8
Q ss_pred ccccccCCEEEEEECCCCCEEEE-----------EeCCCcEEEeecccCCCcccceee----eeccCcCceeEEEECCCC
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISS-----------CGEDKNIRLWGKESFGNKFTAKAI----LSDGHQRTIRETAWSPCG 109 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s-----------~s~D~~v~~W~~~~~~~~~~~~~~----~~~~h~~~V~~~~~~~~~ 109 (377)
.|.+|...|.++++++ ..+++ ++.|+++|+|+............. ....+...+..++|+|+|
T Consensus 68 ~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg 145 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG 145 (365)
T ss_dssp ECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS
T ss_pred EccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC
Confidence 5788999999887764 44554 456888999987643222111110 112344568899999999
Q ss_pred CEEEEE--ECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 110 NFIASA--SFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 110 ~~l~s~--s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
++++++ +.|+.|+|||+.+++.. ..+. |...|.+++|+|+|+++++++.+ .+++|+..+.... .......|..
T Consensus 146 ~~la~as~~~d~~i~iwd~~~~~~~--~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~-~~~~~~~~~~ 220 (365)
T 4h5i_A 146 TVAAIASSKVPAIMRIIDPSDLTEK--FEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCI-ARKTDFDKNW 220 (365)
T ss_dssp SCEEEEESCSSCEEEEEETTTTEEE--EEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEE-EEECCCCTTE
T ss_pred CEEEEEECCCCCEEEEeECCCCcEE--EEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcce-eeeecCCCCC
Confidence 998755 47899999999988654 3343 77889999999999999999855 5666666655432 2233456788
Q ss_pred ceeEEEEeeCCcEEEEeeCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 188 DVKKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.+.+++|+|+++++++++.|+ .+++|+.............+.+|...|++++|+|+|++||+|+.|++|++||+..
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 899999999999999999887 5778887655443334456778999999999999999999999999999999632
Q ss_pred CCCCCCCCCCCCCCcEEEEEee-cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTL-SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
.+++..+ .+| ...|++++|+|++++|++++.|++||||++...
T Consensus 301 ---------------~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 301 ---------------LSMSKIFKQAH-SFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ---------------TEEEEEETTSS-SSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ---------------CcEEEEecCcc-cCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 2445554 454 568999999999999999999999999998543
No 88
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=257.41 Aligned_cols=298 Identities=12% Similarity=0.058 Sum_probs=218.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCC---Cccccee------------------------------------
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG---NKFTAKA------------------------------------ 90 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~---~~~~~~~------------------------------------ 90 (377)
..++.+++|+|+|++|+++ .++.|++||..+.. .......
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977666 57899999986532 0000000
Q ss_pred -------------eeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCC--CCceEEeEEecCccCCEEEEEEcCCCC
Q psy18091 91 -------------ILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKR--SGQFECNATLEGHENEVKSVTWSKNGQ 154 (377)
Q Consensus 91 -------------~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~--~~~~~~~~~~~~h~~~v~~l~~~~~~~ 154 (377)
....+|...|.+++|+|++++| ++++.|+.|++||+. +++.........|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0001355579999999999996 899999999999998 665443322235778999999999999
Q ss_pred EEEEEECCCcEEEEEcCCCCcee-EEEEeeccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccceeeee-cc
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEYE-CAAVINAHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADWINFAT-LK 229 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~~ 229 (377)
+|++++.+|.+++|++....... +...+..|...|.+++|+|+ +++|++|+.|+.|++||+..... ... +.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~~~~ 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDKWLF 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEEECC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eeeeec
Confidence 99999999999999987764332 22345678899999999999 99999999999999999875542 223 56
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC----------------------
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---------------------- 287 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 287 (377)
+|...|++++|+ ++.+|++++.|++|++||+..... ...+..
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN---------------LSTFDYNSLIKPYLNDQHLAPPRFQNEN 302 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE---------------EEEEECHHHHGGGCCTTSBC--------
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE---------------eeeecchhhhhhhhhhcccccccccccc
Confidence 899999999999 999999999999999999743221 111110
Q ss_pred --CCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC-
Q psy18091 288 --HHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD- 363 (377)
Q Consensus 288 --~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~- 363 (377)
.....|..+.|+|+++++++++ .++.|++|+....... .+. .+.. ..+| ..|.+++|+| +..+++.++.
T Consensus 303 ~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~-~l~---~~~~-~~~~-~~v~~~~~~~-~~~~v~~~~~~ 375 (450)
T 2vdu_B 303 NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG-DLA---LKQI-ITFP-YNVISLSAHN-DEFQVTLDNKE 375 (450)
T ss_dssp --CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT-CEE---EEEE-EECS-SCEEEEEEET-TEEEEEECCTT
T ss_pred cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC-cee---eccE-eccC-CceEEEEecC-CcEEEEEeccc
Confidence 1234688999999999999999 8999999998211110 011 1111 2345 7899999999 4444444443
Q ss_pred -----CCcEEEEecccC
Q psy18091 364 -----DGDVKLWQIKLE 375 (377)
Q Consensus 364 -----Dg~i~iWd~~~~ 375 (377)
+..|++|.++.+
T Consensus 376 ~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 376 SSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp CCSSCCCSEEEEEEETT
T ss_pred CCCCCCcceEEEEEEcC
Confidence 566899988654
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-32 Score=253.38 Aligned_cols=256 Identities=18% Similarity=0.249 Sum_probs=204.5
Q ss_pred ccccccccCCEEEEEECCC----C---CEEEEEeCCCcEEEeecccCCCcccceeeeeccC-----cCceeEEEEC----
Q psy18091 43 SQTLKGHQGRVWNVSWNPQ----G---TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWS---- 106 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~----g---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~---- 106 (377)
...+.+|.+.|++++|+|+ | ++|++++.|++|++|+.................| ...|.+++|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccC
Confidence 4567899999999999999 9 9999999999999999875322111001123456 5899999999
Q ss_pred CCCCE-EEEEECCCcEEEEeCCC------CceEE---eEEe-------cCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 107 PCGNF-IASASFDATTAVWDKRS------GQFEC---NATL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 107 ~~~~~-l~s~s~d~~i~iwd~~~------~~~~~---~~~~-------~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
|++++ |++++.|+.|++||+.+ ++... ...+ ..|...|.+++|+|++ ++++++.|+.|++||
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d 213 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISE 213 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEE
Confidence 99999 99999999999999877 43221 1134 4588999999999999 999999999999999
Q ss_pred cCCCCceeEEEEeec---c---ccceeEEEEeeCCcEEEEeeCC---CcEEEEecCcccccceeeeeccc----------
Q psy18091 170 VGEEDEYECAAVINA---H---IQDVKKVRFHPFDNILASASYD---DTVKLFKEDKAEADWINFATLKS---------- 230 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~s~s~d---g~i~~~~~~~~~~~~~~~~~~~~---------- 230 (377)
++... ....+.. | ...+.+++|+|++++|++++.| |.|++||++.... ...+..
T Consensus 214 ~~~~~---~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~~~~ 286 (397)
T 1sq9_A 214 LSTLR---PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQASLG 286 (397)
T ss_dssp TTTTE---EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC--------C
T ss_pred CCCCc---eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCccccccccc
Confidence 98763 3344566 7 8899999999999999999999 9999999876543 345566
Q ss_pred ---CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec------CC-------------
Q psy18091 231 ---HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS------GH------------- 288 (377)
Q Consensus 231 ---h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------------- 288 (377)
|...|.+++|+|++.+|++++.|+.|++||+... .+...+. +|
T Consensus 287 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 287 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK---------------ERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---------------EEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC---------------ceeEEEecccCcccchhhhhcccccccc
Confidence 9999999999999999999999999999996432 2344444 43
Q ss_pred -CCcceeEEEecccC----------CEEEEEeCCCcEEEEEeCC
Q psy18091 289 -HGRTIYDISWCHLT----------DLIATACGDDAIRIFKENP 321 (377)
Q Consensus 289 -~~~~v~~~~~~~~~----------~~l~~~~~d~~i~v~~~~~ 321 (377)
|...|..++|+|++ .+|++++.||.|++|+...
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 26789999999997 7999999999999998643
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=264.65 Aligned_cols=285 Identities=15% Similarity=0.217 Sum_probs=207.1
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCC---Cc-eE
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRS---GQ-FE 132 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~---~~-~~ 132 (377)
|+|+++.+++++ .|+.. + .....+..+|...|.+++|+| ++++|++|+.|+.|++||+.+ +. ..
T Consensus 35 f~~~~~~~~~~~------~w~~~--g---~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 103 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGNLR--G---KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS 103 (437)
T ss_dssp GCCCCCCCCCCC------GGGCC--C---CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS
T ss_pred cCCccccccccc------ccccc--c---eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc
Confidence 678888887765 38643 1 122233368999999999999 999999999999999999865 43 11
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcC---CCCcee-----EEEEee--c--cccceeEEE--EeeCC
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVG---EEDEYE-----CAAVIN--A--HIQDVKKVR--FHPFD 198 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~---~~~~~~-----~~~~~~--~--~~~~v~~~~--~~~~~ 198 (377)
....+ +|..+|.+++|+|++++|++++.||.|++||+. ...... +...+. . +...+.++. +++++
T Consensus 104 ~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 104 SSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp CSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred eeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 22233 489999999999999999999999999999985 222111 111111 1 344566666 55789
Q ss_pred cEEEEeeCCCcEEEEecCcccccceeeeeccc--CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 199 NILASASYDDTVKLFKEDKAEADWINFATLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 199 ~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
.++++|+.||.|++||++.... ...+.. |...|++++|+|++.+|++|+.|+.|++||+...
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~------------ 246 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN------------ 246 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT------------
T ss_pred CEEEEEeCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc------------
Confidence 9999999999999999976543 344555 8899999999999999999999999999996421
Q ss_pred CcEEEEEeecCCCCcceeEEEec----ccCCEEEEEeCCCcEEEEEeCCCCCCCcc---------eeeee-----eeccc
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWC----HLTDLIATACGDDAIRIFKENPEAGDSDM---------VSFDL-----VHTEH 338 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~d~~i~v~~~~~~~~~~~~---------~~~~~-----~~~~~ 338 (377)
.+...+.-.+...|..+.|+ +++.+|++++.|+.|++|+.......... ..+.. .....
T Consensus 247 ---~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (437)
T 3gre_A 247 ---VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNF 323 (437)
T ss_dssp ---EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCC
T ss_pred ---cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccccee
Confidence 34455542234589999555 45679999999999999997643210000 00000 00001
Q ss_pred cc--eecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 339 RA--HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 339 ~~--h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+ |...|++++|++ +.+|+||+.||.|++||++..
T Consensus 324 ~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 324 CGIRSLNALSTISVSN--DKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCCCSGGGGCCEEEET--TEEEEEEGGGTEEEEEETTCG
T ss_pred cccccCCceEEEEECC--ceEEEecCCCCeEEEEECCCc
Confidence 23 888999999994 468999999999999999764
No 91
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.5e-32 Score=246.25 Aligned_cols=292 Identities=12% Similarity=0.182 Sum_probs=205.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~i 123 (377)
.+++|.+.|++++|+|||++|++|+.|+ +++|+.++.. .... .+...+..+++.++++.+ ++++.|+.|++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVA------HIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEE------EEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcc------eeee-eecCCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 4688999999999999999999998775 7899976321 1111 122357888899988877 56778899999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC-CceeEEEEeeccccceeEEEEeeCCcEEE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE-DEYECAAVINAHIQDVKKVRFHPFDNILA 202 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 202 (377)
||..+++... .+. |..+|.+++|+++. ++.+ .|+.|++||+... ....... . ....+.+++ .+++
T Consensus 86 Wd~~~~~~~~--~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~---~---~~~~~~~s~--~~la 151 (355)
T 3vu4_A 86 WDDVKKQDVS--RIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDI---R---FGGVCEFSN--GLLV 151 (355)
T ss_dssp EETTTTEEEE--EEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCE---E---EEEEEEEET--TEEE
T ss_pred EECCCCcEEE--EEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEec---c---CCceEEEEc--cEEE
Confidence 9999886543 333 56799999998764 4443 4789999999876 3332211 1 333456666 5555
Q ss_pred E--eeCCCcEEEEecCcccc-----------ccee-eeecccCCcceEEEEEcCCCCeEEEeeCCCc-EEEEeeeCCCCC
Q psy18091 203 S--ASYDDTVKLFKEDKAEA-----------DWIN-FATLKSHTSTVWSLAFDRIGSRLATCSDDAT-VKIWKEYKPGNS 267 (377)
Q Consensus 203 s--~s~dg~i~~~~~~~~~~-----------~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~-i~iw~~~~~~~~ 267 (377)
. |+.||.|++||+..... ...+ ...+.+|...|++++|+|+|.+|++|+.|++ |++||+...
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--- 228 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--- 228 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC---
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC---
Confidence 5 68999999999875430 0011 4567899999999999999999999999998 999996422
Q ss_pred CCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeee-----e--------
Q psy18091 268 AGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFD-----L-------- 333 (377)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~-----~-------- 333 (377)
.++..+. ++|...|++++|+|++++|++++.|+++++|+.............. .
T Consensus 229 ------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 229 ------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp ------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred ------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 3456666 5356799999999999999999999999999976542111000000 0
Q ss_pred eeccccceecceeEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
.......+..+...++|+| ++..|++++.||.+++|+++.
T Consensus 297 ~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEEEc
Confidence 0001111223457799999 567899999999999999875
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.2e-32 Score=251.27 Aligned_cols=258 Identities=15% Similarity=0.168 Sum_probs=199.3
Q ss_pred ccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|.+++|+|++ ++|++|+.|+.|++||+.+++........+|...|.+++|+| +++++++++.|+.|++||++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 5799999999999998 999999999999999999887665544557999999999999 67999999999999999998
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
.. ..........|...+.+++|+|+++++++|+.|+.|++||++.. ....+..|...|.+++|+|++. +|+++
T Consensus 150 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 150 GS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGH-----EIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp SC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSC-----EEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred CC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCC-----EEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 53 22222222344577999999999999999999999999998522 2456778999999999999999 89999
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCCCCCCCcce
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENPEAGDSDMV 329 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~~~~~~~~~ 329 (377)
+.|+.|++||+....... .+...+ + +...|..++|+| ++.+|++++.|+.+++|+...........
T Consensus 224 ~~d~~i~iwd~~~~~~~~-----------~~~~~~-~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKN-----------SYIAEM-P-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp ETTSEEEEEEGGGCCSTT-----------CEEEEE-E-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred eCCCEEEEEeCCCCCccc-----------ceEEEe-c-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999999986532211 123333 3 456899999999 99999999999999999976543221111
Q ss_pred eeeeeeccccceec----------ceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 330 SFDLVHTEHRAHNQ----------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 330 ~~~~~~~~~~~h~~----------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.. ......|.. .+.+++|+|+ +.+ +|+.||.|+|||++..+
T Consensus 291 ~~---~~~~~~~~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 291 IH---PHRQFQHLTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EC---CBCCCTTSCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCC
T ss_pred cc---cccccccccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCc
Confidence 00 000112333 3445677774 443 88999999999997653
No 93
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.5e-32 Score=269.55 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=201.4
Q ss_pred ccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCc---eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 94 DGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQ---FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.+|...|++++|+|+ +++|++|+.|+.|++||+.... ......+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 589999999999986 5799999999999999987532 123456789999999999999999999999999999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC--CeE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG--SRL 247 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l 247 (377)
+.+.. +...+..|...|.+++|+|+++++++|+.|+.|++|+...... ........+|...|.+++|+|++ ..|
T Consensus 459 ~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 459 LAAGV---STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp TTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred CCCCc---ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 98763 3456778999999999999999999999999999999764322 11122345789999999999986 579
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
++++.|++|++||+... .+...+.+| ...|.+++|+|++++|++++.|+.|++|+.....
T Consensus 535 ~s~s~d~~v~vwd~~~~---------------~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~---- 594 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNC---------------KLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK---- 594 (694)
T ss_dssp EEEETTSCEEEEETTTC---------------CEEEEECCC-SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE----
T ss_pred EEEeCCCeEEEEECCCC---------------cEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc----
Confidence 99999999999996422 234566676 4589999999999999999999999999876432
Q ss_pred ceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 328 MVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 328 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+... .+...|++++|+|. +.+|++ +.|+.|+|||++..
T Consensus 595 -----~~~~~--~~~~~v~~~~~sp~-~~~l~~-~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 595 -----KLYSL--EANSVIHALCFSPN-RYWLCA-ATEHGIKIWDLESK 633 (694)
T ss_dssp -----EEECC--BCSSCEEEEEECSS-SSEEEE-EETTEEEEEETTTT
T ss_pred -----eEEEe--cCCCcEEEEEEcCC-CcEEEE-EcCCCEEEEECCCC
Confidence 11111 23457999999994 555654 45667999999864
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8e-33 Score=259.98 Aligned_cols=210 Identities=16% Similarity=0.155 Sum_probs=169.8
Q ss_pred ccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcC
Q psy18091 94 DGHQRTIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 94 ~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~ 171 (377)
.+|...|++++|+| ++++||+|+.||.|+|||+.+++......+.+|.+.|++++|+| ++++|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 35788899999999 56799999999999999998876655566778999999999998 68899999999999999997
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
... .........+...+.+++|+|++.++++|+.||.|++||++... +..+.+|...|++++|+|++. +|+++
T Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 196 GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-----LWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-----CCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-----eEEEecccceEEeeeecCCCceEEEEe
Confidence 642 22111122334457889999999999999999999999986432 456788999999999999986 68899
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+.|++|++||+......... ....+ |...|++++|+|++.+|++++.|+.|++|+....
T Consensus 270 s~d~~v~iwd~~~~~~~~~~------------~~~~~-h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASF------------LYSLP-HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCC------------SBCCB-CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred cCcceeeEEecccccccceE------------EEeee-ccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 99999999997644322111 11123 3568999999999999999999999999987654
No 95
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=248.95 Aligned_cols=258 Identities=19% Similarity=0.315 Sum_probs=206.1
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
+|.+.|++++|+|++++|++|+.|+.|++|+.. +. . .....+|...|.+++|+|++++|++++.|+.+++||+.
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~-~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT--GA-L---LNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT--SC-E---EEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CC-e---eeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 378899999999999999999999999999843 11 1 11235799999999999999999999999999999997
Q ss_pred CCceEE------------------------------------------------------eEEecCccCCEEEEEEcCCC
Q psy18091 128 SGQFEC------------------------------------------------------NATLEGHENEVKSVTWSKNG 153 (377)
Q Consensus 128 ~~~~~~------------------------------------------------------~~~~~~h~~~v~~l~~~~~~ 153 (377)
+++... ...+..|...|.+++|+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN 259 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC
Confidence 664321 12345688999999999999
Q ss_pred CEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCc
Q psy18091 154 QFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTS 233 (377)
Q Consensus 154 ~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~ 233 (377)
+++++++.|+.|++||++..... ..+..|...+.++.|+|++ .+++++.|+.|++||+..... ...+..|..
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~ 331 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQ---NCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL----LALSIVDGV 331 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCS---EEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE----EEEEECTTC
T ss_pred CEEEEEcCCCEEEEEECCCCccc---eEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE----eEecccCCc
Confidence 99999999999999999876433 3456788899999999999 999999999999999876543 455678899
Q ss_pred ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC-----CCCcEEEEEeecCCCCc-ceeEEEecccCCEEEE
Q psy18091 234 TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD-----NDSVWKCVCTLSGHHGR-TIYDISWCHLTDLIAT 307 (377)
Q Consensus 234 ~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~ 307 (377)
.|.+++|+|++.+|++++.|+.|++|++............. ......+...+.+|... .|..++|+|++++|++
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 411 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV 411 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEE
Confidence 99999999999999999999999999975432110000000 00111256677776554 8999999999999999
Q ss_pred EeCCCcEEEEEe
Q psy18091 308 ACGDDAIRIFKE 319 (377)
Q Consensus 308 ~~~d~~i~v~~~ 319 (377)
++.||.+++|+.
T Consensus 412 ~~~dg~i~iw~~ 423 (425)
T 1r5m_A 412 AYSLQEGSVVAI 423 (425)
T ss_dssp EESSSCCEEEEC
T ss_pred EecCceEEEEee
Confidence 999999999975
No 96
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7e-33 Score=249.32 Aligned_cols=217 Identities=24% Similarity=0.485 Sum_probs=177.3
Q ss_pred ccccccccCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEECC
Q psy18091 43 SQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASFD 118 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~d 118 (377)
...|++|.++|++++|++ ++++|+||+.|++|++||..... .. ......+|...|.+++|+|+ +.+|++|+.|
T Consensus 50 ~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~--~~-~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 50 IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT--WE-KSHEHAGHDSSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC--CC-EEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc--ce-EEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence 356899999999999986 48999999999999999987421 11 11223579999999999997 7899999999
Q ss_pred CcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCC-----------------CCEEEEEECCCcEEEEEcCCCCceeEEE
Q psy18091 119 ATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKN-----------------GQFLATCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 119 ~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~-----------------~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+.|++||+..+. ......+.+|...|.+++|+|+ +++|++|+.|+.|++||++......+..
T Consensus 127 ~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 999999987653 3334556789999999999997 4689999999999999997654444555
Q ss_pred EeeccccceeEEEEeeCC----cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 181 VINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~----~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..|...|.+++|+|++ ++|++++.|+.|++|++............+..|...|++++|+|++.+|++++.|++|
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred ecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 678899999999999986 7899999999999999875321111122345688999999999999999999999999
Q ss_pred EEEeee
Q psy18091 257 KIWKEY 262 (377)
Q Consensus 257 ~iw~~~ 262 (377)
++|+..
T Consensus 287 ~lw~~~ 292 (316)
T 3bg1_A 287 TLWKES 292 (316)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999863
No 97
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=256.61 Aligned_cols=259 Identities=14% Similarity=0.244 Sum_probs=196.2
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc---------eEEeEEecCcc------------CCEEEEEEcCCC
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHE------------NEVKSVTWSKNG 153 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---------~~~~~~~~~h~------------~~v~~l~~~~~~ 153 (377)
.|.+.|.+++|+|++++|++|+.||.|++||+.+++ ......+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999987654 23456778898 889999999998
Q ss_pred --CEEEEEECCCcEEEEEcCCCCce------------------------------------eEE-EEeeccccceeEEEE
Q psy18091 154 --QFLATCSRDKSVWVWEVGEEDEY------------------------------------ECA-AVINAHIQDVKKVRF 194 (377)
Q Consensus 154 --~~l~s~~~dg~v~~wd~~~~~~~------------------------------------~~~-~~~~~~~~~v~~~~~ 194 (377)
.+|++++.|+.|++||+...... .+. .....|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998653210 001 113578899999999
Q ss_pred eeCCcEEEEeeCCCcEEEEecCccccccee----eeecccCCcceEEEEEcCCC-CeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWIN----FATLKSHTSTVWSLAFDRIG-SRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~----~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
+|++++|++| .|+.|++||++........ ...+..|...|++++|+|++ .+|++++.|+.|++||+........
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 8999999999843321110 01466899999999999998 8999999999999999764432110
Q ss_pred CCCCCCCCcEEEEEeecCCCC-----------cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccc
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHG-----------RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEH 338 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~ 338 (377)
....+.+|.. ..|..++|+|++.+|++++. +.+++|+........ ...
T Consensus 265 -----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~---------~~~ 323 (447)
T 3dw8_B 265 -----------HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV---------ETY 323 (447)
T ss_dssp -----------TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS---------CCE
T ss_pred -----------eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc---------cee
Confidence 0123333322 38999999999999999999 999999986421110 111
Q ss_pred cceec---------------ceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 339 RAHNQ---------------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 339 ~~h~~---------------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+|.. .+..++|+|+ +.+|++|+.||.|+|||++..+
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCC
T ss_pred eccccccccccccccccccccceEEEECCC-CCEEEEeccCCEEEEEEcCCCc
Confidence 23432 1334999995 6688999999999999998653
No 98
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.1e-33 Score=252.33 Aligned_cols=251 Identities=20% Similarity=0.360 Sum_probs=202.3
Q ss_pred ccCCEEEEEECCC----CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEE
Q psy18091 49 HQGRVWNVSWNPQ----GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAV 123 (377)
Q Consensus 49 h~~~V~~v~~~~~----g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~i 123 (377)
|.+.|++++|+|+ |++|++|+.|++|++||..+. .. .. ...+|...|.+++|+| ++++|++++.|+.|++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~--~~-~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~i 142 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--QC--IK-HYVGHGNAINELKFHPRDPNLLLSVSKDHALRL 142 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--CE--EE-EEESCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--eE--ee-eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 6688999999998 679999999999999998742 11 11 1247999999999999 8999999999999999
Q ss_pred EeCCCCceEEeEEe---cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee-----------------------
Q psy18091 124 WDKRSGQFECNATL---EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----------------------- 177 (377)
Q Consensus 124 wd~~~~~~~~~~~~---~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----------------------- 177 (377)
||+.+++.. ..+ .+|...|.+++|+|+++++++++.||.|++||++......
T Consensus 143 wd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 143 WNIQTDTLV--AIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp EETTTTEEE--EEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred EEeecCeEE--EEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 999987543 444 6899999999999999999999999999999987643110
Q ss_pred --EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEEEcCC--
Q psy18091 178 --CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLAFDRI-- 243 (377)
Q Consensus 178 --~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~-- 243 (377)
.......|...|.+++|+ ++++++++.||.|++||+...... ......+..|...|++++|+|+
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 012233488899999998 789999999999999998754321 1224566778889999999999
Q ss_pred CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 244 GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+.+|++++.||.|++||+....... .....+.+|. ...|..++|+|++++|++++.||.|++|+.
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHK-----------AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGG-----------CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEecCCcEEEEECCCCCCcc-----------ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 9999999999999999975432110 1233455552 578999999999999999999999999975
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=243.50 Aligned_cols=265 Identities=14% Similarity=0.180 Sum_probs=206.1
Q ss_pred ccccCCEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEE------ECCCCCEEEEEEC
Q psy18091 47 KGHQGRVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETA------WSPCGNFIASASF 117 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~------~~~~~~~l~s~s~ 117 (377)
.+|.+.|++++|+|+ |++|++|+.|++|++||....... .....+|...|.+++ |+|++++|++++.
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMP----VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSC----SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCcc----EEEEEecccceEEEeeccccccCCCccEEEEEeC
Confidence 378999999999998 799999999999999998743211 112357999999995 5788999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccC----CEEEEE----EcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccce
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHEN----EVKSVT----WSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDV 189 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~----~v~~l~----~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v 189 (377)
|+.|++||+.+++. ....+..|.+ .+.+++ |+|+++++++++.|+.|++||++.... .....|...+
T Consensus 138 d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~v 212 (357)
T 3i2n_A 138 DGTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL----RWETNIKNGV 212 (357)
T ss_dssp TSCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE----EEEEECSSCE
T ss_pred CCeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce----eeecCCCCce
Confidence 99999999987652 2334444443 899998 678999999999999999999987643 2235677899
Q ss_pred eEEEEee---CCcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeCC
Q psy18091 190 KKVRFHP---FDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 190 ~~~~~~~---~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~~ 264 (377)
.++.|+| +++++++++.||.|++||++...... ........|...|++++|+|++. +|++++.||.|++||+...
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred EEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 9999999 89999999999999999987654321 11123448999999999999998 8999999999999998755
Q ss_pred CCCCCCCC----CCCCCcEEEEEeecCCCCcceeEEEecccCCEEE-EEeCCCcEEEEEeCC
Q psy18091 265 GNSAGIPT----PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TACGDDAIRIFKENP 321 (377)
Q Consensus 265 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~v~~~~~ 321 (377)
........ ........++..+.+| ...|.+++|+|++.+|+ +++.|+.+++|+...
T Consensus 293 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 293 IQRSKKDSEGIEMGVAGSVSLLQNVTLS-TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SCC--CCTTSCCCCCCCEEEEEEEEECC-SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cccccccCCCCccccccccceeeccccC-CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 43321110 1112234667777776 56899999999999888 899999999998653
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=237.90 Aligned_cols=243 Identities=21% Similarity=0.348 Sum_probs=202.5
Q ss_pred eccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC
Q psy18091 93 SDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE 172 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~ 172 (377)
..+|...|.+++| |++++|++++.|+.|++||+.+++. ...+..|...|.+++|+|+++++++++.|+.+++|++..
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 90 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL--GTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA 90 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE--EEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE--EEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence 3589999999999 9999999999999999999987753 355677899999999999999999999999999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEEEee
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLATCS 251 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s 251 (377)
.........+..|...+.++.| +++++++++.||.|++|+.. .....+..|...|.+++|.+ ++.++++++
T Consensus 91 ~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 162 (313)
T 3odt_A 91 TSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG------SLVYNLQAHNASVWDAKVVSFSENKFLTAS 162 (313)
T ss_dssp CTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT------EEEEEEECCSSCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC------cEEEecccCCCceeEEEEccCCCCEEEEEE
Confidence 6544445566789999999998 57899999999999999922 12455678999999999988 899999999
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceee
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSF 331 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~ 331 (377)
.|+.|++||.. .....+...+...+..+.|+|++. +++++.|+.+++|+....+
T Consensus 163 ~d~~i~i~d~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~-------- 216 (313)
T 3odt_A 163 ADKTIKLWQND-----------------KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD-------- 216 (313)
T ss_dssp TTSCEEEEETT-----------------EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC--------
T ss_pred CCCCEEEEecC-----------------ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh--------
Confidence 99999999832 234555565667899999999877 9999999999999876543
Q ss_pred eeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 332 DLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 332 ~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+ ....+|..+|++++|+|. + .|++++.||.|++||++..+
T Consensus 217 -~~-~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 217 -VL-RTYEGHESFVYCIKLLPN-G-DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp -EE-EEEECCSSCEEEEEECTT-S-CEEEEETTSEEEEECTTTCC
T ss_pred -hh-hhhhcCCceEEEEEEecC-C-CEEEEecCCEEEEEECCCCc
Confidence 11 123478899999999995 4 58899999999999998653
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=9.9e-32 Score=243.58 Aligned_cols=255 Identities=11% Similarity=0.135 Sum_probs=198.7
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEc-
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEV- 170 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~- 170 (377)
.+|...|.+++|+|++++|++++.|+.|++||+.++. ......+.+|...|.+++|+|+++ ++++++.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 4799999999999999999999999999999987765 112234457999999999999999 9999999999999999
Q ss_pred CCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeCCCcEEEEecCc---------ccccceeeeecccCCcceEEEE
Q psy18091 171 GEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK---------AEADWINFATLKSHTSTVWSLA 239 (377)
Q Consensus 171 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~---------~~~~~~~~~~~~~h~~~v~~~~ 239 (377)
..... ..+.. |...|.+++|+| ++.+++++.|+.|++|+++. ... ...+. |...|.+++
T Consensus 88 ~~~~~----~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 88 GSPSF----QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN----SNNTK-VKNKIFTMD 157 (342)
T ss_dssp SSSSE----EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC----SSSSS-SCCCEEEEE
T ss_pred cCCce----EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe----eeEEe-eCCceEEEE
Confidence 76532 34567 899999999999 99999999999999999875 221 23333 888999999
Q ss_pred EcCCCCeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEE
Q psy18091 240 FDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIF 317 (377)
Q Consensus 240 ~~~~~~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~ 317 (377)
|++++ +++++.|+.|++||+.. ..... ......+...+..+.|+| +++++++++.||.+++|
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~--------------~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNG--------------TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCC--------------EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccc--------------eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 99887 99999999999999764 22110 111222456899999999 99999999999999999
Q ss_pred EeCCCCCC---Ccceeeeeeec--cccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 318 KENPEAGD---SDMVSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 318 ~~~~~~~~---~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+....... .....+..... ...+|..+|++++|+|. +.+|++|+.||.|++||++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTT
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccH
Confidence 97654100 01111110000 00134559999999994 678999999999999999864
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.1e-31 Score=244.48 Aligned_cols=245 Identities=20% Similarity=0.330 Sum_probs=198.1
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
|.+.|++++|+|++++|++|+.||.|++||..... . .....+|...|.+++| ++++|++++.|+.|++||+..
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--~---~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--K---LRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--E---EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--E---EEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc
Confidence 78999999999999999999999999999987421 1 1123479999999999 467999999999999999985
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee--
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS-- 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s-- 205 (377)
... ....+.+|.+.|.+++|+|++++|++|+.|+.|++||++.... ...+..|...+.+++|+|++ .++++++
T Consensus 206 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 206 ANH-QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP---KFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp SSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE---EEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred Ccc-eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc---cEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 432 3456778999999999999999999999999999999987643 34566788999999999976 5566654
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE--eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT--CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVC 283 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
.|+.|++||+..... ...+ .+...|.+++|+|++.++++ |+.|+.|++|+..... .....
T Consensus 282 ~d~~i~i~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-------------~~~~~ 343 (401)
T 4aez_A 282 MDKQIHFWNAATGAR----VNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-------------LTKQV 343 (401)
T ss_dssp TTCEEEEEETTTCCE----EEEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-------------EEEEE
T ss_pred CCCEEEEEECCCCCE----EEEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-------------ceeEE
Confidence 799999999876543 2223 36678999999999999998 4489999999975321 12233
Q ss_pred eecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 284 TLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 284 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
.+.+| ...|..++|+|++.+|++++.||.+++|+....+
T Consensus 344 ~~~~h-~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 344 DIPAH-DTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEECC-SSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EecCC-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 45554 4689999999999999999999999999876543
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=243.41 Aligned_cols=272 Identities=11% Similarity=0.057 Sum_probs=197.6
Q ss_pred EEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--------
Q psy18091 56 VSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-------- 127 (377)
Q Consensus 56 v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-------- 127 (377)
..+.+++.+|++|+.||+|++||..+.... .. + ....|.++.|+|. +++++.|+.+++|+..
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~--~~--~---~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTI--TT--I---TTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCE--EE--E---EEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEET
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEE--EE--E---ecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeec
Confidence 345668899999999999999998743211 11 1 1356777888887 9999999999999765
Q ss_pred -CCceEEeEEecCccCCEEEEEEcC--CCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEE
Q psy18091 128 -SGQFECNATLEGHENEVKSVTWSK--NGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 128 -~~~~~~~~~~~~h~~~v~~l~~~~--~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s 203 (377)
+++.. .....+|.++|.+++|+| +++++++++.||+|++||++..... ... ..+...+.+++|+|++.++++
T Consensus 112 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~---~~~~~~~~~~i~~~~~~pdg~~las 187 (343)
T 3lrv_A 112 KTNKVL-REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY---IVHSAKSDVEYSSGVLHKDSLLLAL 187 (343)
T ss_dssp TTCCEE-EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE---EEECCCSSCCCCEEEECTTSCEEEE
T ss_pred CCccee-EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE---EEEecCCCCceEEEEECCCCCEEEE
Confidence 33322 122336778999999999 9999999999999999999876542 223 345557999999999999999
Q ss_pred eeCCCcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEE
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCV 282 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
|+.||.|++||++..... ...+.. |...|++++|+|++.+|++++. +.|++||+.+......+..
T Consensus 188 g~~dg~i~iwd~~~~~~~---~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~---------- 253 (343)
T 3lrv_A 188 YSPDGILDVYNLSSPDQA---SSRFPVDEEAKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPT---------- 253 (343)
T ss_dssp ECTTSCEEEEESSCTTSC---CEECCCCTTSCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCC----------
T ss_pred EcCCCEEEEEECCCCCCC---ccEEeccCCCCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecc----------
Confidence 999999999999866531 134566 9999999999999999999995 4999999865533222111
Q ss_pred EeecCCCCcce--eEEEecccCCEEEEEeC-CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC--CCce
Q psy18091 283 CTLSGHHGRTI--YDISWCHLTDLIATACG-DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV--VPGM 357 (377)
Q Consensus 283 ~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~~ 357 (377)
+.. +...+ ..++|+|++.+|++++. |+.+++|+....... +. ..++.+++|.|. +...
T Consensus 254 --~~~-~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~~ 316 (343)
T 3lrv_A 254 --YTI-PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN-----WT---------KDEESALCLQSDTADFTD 316 (343)
T ss_dssp --CBC------CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS-----EE---------EEEEEECCC----CCCCE
T ss_pred --ccc-ccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc-----eE---------ecCceeEecCccccccce
Confidence 001 11122 46999999999999998 999999987543311 11 145777778761 2456
Q ss_pred EEEeeCCCcEEEEec
Q psy18091 358 LASCSDDGDVKLWQI 372 (377)
Q Consensus 358 laS~s~Dg~i~iWd~ 372 (377)
+++++.||.++++-.
T Consensus 317 l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 317 MDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred eEEEecCCceEEEEe
Confidence 788888888887743
No 104
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-30 Score=236.64 Aligned_cols=252 Identities=15% Similarity=0.267 Sum_probs=205.6
Q ss_pred ccccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC--
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-- 118 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-- 118 (377)
.....+.+|.+.|++++|+|++++|++++.|++|++||+.... . ... ..|...|.+++|+|+++++++++.+
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~--~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~ 138 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ--C--VAT--WKSPVPVKRVEFSPCGNYFLAILDNVM 138 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--E--EEE--EECSSCEEEEEECTTSSEEEEEECCBT
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--E--EEE--eecCCCeEEEEEccCCCEEEEecCCcc
Confidence 3445788999999999999999999999999999999987421 1 111 2377899999999999999999999
Q ss_pred ---CcEEEEeCCCCce---------EEeEEecCccC--CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 119 ---ATTAVWDKRSGQF---------ECNATLEGHEN--EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 119 ---~~i~iwd~~~~~~---------~~~~~~~~h~~--~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
+.+++||+..+.. .....+..|.. .+.+++|+|+++++++++.||.|++||++... .....+..
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~ 216 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY--EYVDSIDL 216 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT--EEEEEEEC
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc--EeEEEEec
Confidence 9999999865431 11234445666 99999999999999999999999999998743 23455677
Q ss_pred cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----------
Q psy18091 185 HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---------- 254 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---------- 254 (377)
|...+.+++|+|++++|++++.||.|++||+..... ...+. +...+.+++|+|++.++++++.++
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred CCCceeEEEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 889999999999999999999999999999876543 22222 777899999999999999999998
Q ss_pred ----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 255 ----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 255 ----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
.+++||.... .....+.+| ...|..++|+|++++|++++.||.+++|+...
T Consensus 292 ~~~~~i~~~d~~~~---------------~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 292 EGKFEARFYHKIFE---------------EEIGRVQGH-FGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ---CEEEEEETTTC---------------CEEEEEECC-SSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CCcceeEEEecCCC---------------cchhheecc-cCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7888875321 234555665 45899999999999999999999999998754
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-30 Score=241.66 Aligned_cols=258 Identities=22% Similarity=0.330 Sum_probs=201.7
Q ss_pred cccccccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECCCC-CEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSPCG-NFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~ 117 (377)
....+.+|.+.|++++|+| ++++|++|+.|++|++|++...+.... .......+|...|.+++|+|++ ++|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 3446889999999999999 999999999999999999875321100 1112235799999999999998 69999999
Q ss_pred CCcEEEEeCCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccc-eeEEE
Q psy18091 118 DATTAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQD-VKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~-v~~~~ 193 (377)
|+.|++||+.+++. ...+ .+|...|.+++|+|++++|++++.|+.|++||++.... ...+ ..|... +..+.
T Consensus 153 dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 153 DNVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp TSCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSCCEEE
T ss_pred CCEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcceEEE
Confidence 99999999998854 4556 78999999999999999999999999999999987643 3334 566655 88999
Q ss_pred EeeCCcEEEEe---eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHPFDNILASA---SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~~~~~l~s~---s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~ 269 (377)
|+|++.++++| +.|+.|++||++....... .....|...|.+++|+|++.+|+ +++.|+.|++|++......
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~-- 303 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLEEPLS--LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF-- 303 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCSSCSE--EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC--
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCccccCCce--EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc--
Confidence 99999999999 7999999999876543111 11234677899999999999986 4557999999997543210
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
...+..+. +...|..++|+|++.++++ .++.+++|+...
T Consensus 304 ---------~~~l~~~~--~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 304 ---------LHYLSMFS--SKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp ---------EEEEEEEC--CSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred ---------eEeecccc--cCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 11222222 3468999999999888764 566999998764
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.9e-30 Score=240.53 Aligned_cols=248 Identities=21% Similarity=0.358 Sum_probs=200.0
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+.+|.+.|++|+|+|+|++|++|+.|++|++||.++. .. .....+|...+.+++++ +.+|++|+.|+.+++|
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--~~---~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KR---LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHH 214 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EE---EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--cE---EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEe
Confidence 45678899999999999999999999999999998742 11 11235798899888775 6799999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEEeeCC-cEEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFD-NILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~ 202 (377)
|...... ....+.+|...+..+.|+|+++++++++.|+.+++|+....... ........|...|..++|+|.+ .+++
T Consensus 215 d~~~~~~-~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 215 DVRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp ETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred eecccce-eeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 9876543 34567899999999999999999999999999999999765422 2234456788899999999976 4554
Q ss_pred E--eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 203 S--ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 203 s--~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+ |+.|+.|++||+..... ...+. +...+.++.|++++..+++++ .|+.|++||...
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~--------------- 353 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT--------------- 353 (420)
T ss_dssp EEECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT---------------
T ss_pred EEeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC---------------
Confidence 4 45799999999986543 23333 345788999999999888765 799999998632
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
+.++..+.+|. ..|++++|+|++.+|++|+.|++|++|+...
T Consensus 354 ~~~v~~l~gH~-~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 354 MAKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CCEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CcEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 23467788875 5899999999999999999999999998653
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-32 Score=253.24 Aligned_cols=251 Identities=11% Similarity=0.130 Sum_probs=194.3
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-----ceeEEEECCCCCEEEEEECCCcEE
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFDATTA 122 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~l~s~s~d~~i~ 122 (377)
+|...|++++|+|+|++||+++.||+|++|+.+. .... .. |.. .|.+++|||+|++|++|+.||+|+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~-l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK------MLTN-LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE------EEEE-CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc------eeee-cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 5688999999999999999999999999998542 1111 13 443 599999999999999999999999
Q ss_pred EEeCCCCce-----EEeEEe----cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEE
Q psy18091 123 VWDKRSGQF-----ECNATL----EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKV 192 (377)
Q Consensus 123 iwd~~~~~~-----~~~~~~----~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~ 192 (377)
|||+.++.. .....+ .+|.+.|.+++|+|+| +++++.|++|++||+..+........+ ..|...|.++
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 999988753 123444 6788999999999999 888999999999999876532122334 4677899999
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE--cCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF--DRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+|+ ++.+|+++ ++.|++|+....... ....+|.+.|.+++| +|++..+++++.||+ ++|...
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~~~~~~----~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d-------- 296 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLKNYSIS----SLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED-------- 296 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETTTTEEE----EEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------
T ss_pred EEE--CCEEEEEe-CCeEEEEECCCCeEE----EEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------
Confidence 999 68899887 699999998755431 112279999999999 999999999999999 999631
Q ss_pred CCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 271 PTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
.++++|++.++++. |+.+++|+..... .. ... +...|.+++|
T Consensus 297 ------------------------~~~~spd~~l~a~~--d~~v~lW~~~g~~----------l~-~~~-~~~~I~~va~ 338 (588)
T 2j04_A 297 ------------------------ELHVTADNIIAPYL--EKKFKKWSTIWNE----------FN-NYE-TTLVIHGISL 338 (588)
T ss_dssp ------------------------SEEEECCCSSHHHH--HHHHHHTTTTTTS----------SS-SSC-CEEEEEEEEE
T ss_pred ------------------------cEEECCCceEEEEc--CCEEEEEECCCCc----------ee-eec-cceEEEEEEE
Confidence 14466777666664 8999999653221 01 112 3567999999
Q ss_pred cCCCCceEEEeeC
Q psy18091 351 NPVVPGMLASCSD 363 (377)
Q Consensus 351 ~p~~~~~laS~s~ 363 (377)
+| ++..+|+++.
T Consensus 339 SP-dG~~lA~~~~ 350 (588)
T 2j04_A 339 SP-DGYSIAIVYD 350 (588)
T ss_dssp CT-TSSEEEEEEE
T ss_pred CC-CCCEEEEEEe
Confidence 99 5678888764
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.4e-31 Score=244.85 Aligned_cols=252 Identities=13% Similarity=0.154 Sum_probs=170.4
Q ss_pred ECCCCCEEEEEECCCcEEEEeCCCCceEEe---EEecCccCCEEEEEEcC--------CCCEEEEEECCCcEEEEEcCCC
Q psy18091 105 WSPCGNFIASASFDATTAVWDKRSGQFECN---ATLEGHENEVKSVTWSK--------NGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 105 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~~~h~~~v~~l~~~~--------~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
+.+++.+|++++.|++|+|||..+++.... ..+.+|.+.|.+++|+| ++++|++|+.|++|++||++..
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 344567899999999999999988764332 33678999999999998 7889999999999999999776
Q ss_pred CceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccce---------------------eeeecccC
Q psy18091 174 DEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWI---------------------NFATLKSH 231 (377)
Q Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~---------------------~~~~~~~h 231 (377)
.. ......|...+.+++|+|++ .+|++|+.||.|++||++..+.... ......+|
T Consensus 177 ~~---~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 177 GP---ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp EE---EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred ce---eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 43 33455678899999999987 5899999999999999875432110 01123467
Q ss_pred CcceEEEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC----CcEEEEEeecCCCCcceeEEEecc-cCC-E
Q psy18091 232 TSTVWSLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND----SVWKCVCTLSGHHGRTIYDISWCH-LTD-L 304 (377)
Q Consensus 232 ~~~v~~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~~-~ 304 (377)
...|.++.|. +++..+++++.|+++++||+........+...... ........... .. ......+++ .++ +
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 331 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL-FP-SLLGACPHPRYMDYF 331 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS-SC-CSSCCEECSSCTTEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc-cC-cceeEEEccCCCCEE
Confidence 7889999986 79999999999999999997543221111100000 00000011111 11 222233443 333 6
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+++|+.||.|++|+....... ....+|..+|++|+|+| ++.+||++++|| +.+|++.
T Consensus 332 ~~sgs~Dg~V~lwd~~~~~~~----------~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 332 ATAHSQHGLIQLINTYEKDSN----------SIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEETTTTEEEEEETTCTTCC----------EEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEEG
T ss_pred EEEECCCCEEEEEECCCCcEE----------EEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEEe
Confidence 677888999999997654311 11235778999999999 578999999887 5555543
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=5.9e-30 Score=237.11 Aligned_cols=289 Identities=19% Similarity=0.309 Sum_probs=191.4
Q ss_pred ccccCCEEEEEECC-CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC---CCEEEEEECCCcEE
Q psy18091 47 KGHQGRVWNVSWNP-QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC---GNFIASASFDATTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~-~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~---~~~l~s~s~d~~i~ 122 (377)
.+|.+.|++++|+| ++.+|++++.|+.|++||.... . ......+...+.++.|+|. +.++++++.|+.|+
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--Q----TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--E----EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--c----cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 46999999999999 7789999999999999998742 1 1112236778999999984 45999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEe---------------eccc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVI---------------NAHI 186 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~---------------~~~~ 186 (377)
+||+.+++. ...+.+|...|.+++|+|++++ +++++.||.|++||++..... ...+ ..|.
T Consensus 170 ~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T 4a11_B 170 LCDLKSGSC--SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC--LITLDQHNGKKSQAVESANTAHN 245 (408)
T ss_dssp EEESSSSCC--CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC--SEECCTTTTCSCCCTTTSSCSCS
T ss_pred EEeCCCcce--eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc--cccccccccccceeecccccccc
Confidence 999988754 4567889999999999999984 899999999999999765421 1112 4677
Q ss_pred cceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeec-ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 187 QDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 187 ~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
..|.+++|+|+++++++++.||.|++|++............. ......+........+..+++++.|+.|++||....
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~- 324 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG- 324 (408)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC-
T ss_pred CceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC-
Confidence 889999999999999999999999999988655321111111 111111212222334567788889999999996422
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecce
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 345 (377)
.+...+.+| ...|..++|+|++.+|++++.||.+++|+....+.... +...-
T Consensus 325 --------------~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~-------------~~~~~ 376 (408)
T 4a11_B 325 --------------EQITMLKGH-YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD-------------DDETT 376 (408)
T ss_dssp --------------CEEEEECCC-SSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred --------------cceeeeccC-CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCC-------------CCceE
Confidence 235566665 45899999999999999999999999999875542110 01111
Q ss_pred eEEEecCCCCceEEEeeCCCcEEEEeccc
Q psy18091 346 NCVAWNPVVPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 346 ~~v~~~p~~~~~laS~s~Dg~i~iWd~~~ 374 (377)
....++|.....+.+++.|+.+++|+...
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 377 TKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------------------
T ss_pred eccccccccceeecccCccCceeecCCcc
Confidence 22334444445677889999999998764
No 110
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-29 Score=229.12 Aligned_cols=219 Identities=25% Similarity=0.520 Sum_probs=183.1
Q ss_pred cccccccccCCEEEEEECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~ 117 (377)
....+.+|.+.|++++|+++ +++|++|+.|++|++||+... ... ......+|...|.+++|+|+ +++|++++.
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG--RWS-QIAVHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT--EEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC--cee-EeeeecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 34568899999999999987 999999999999999998742 111 12233568999999999999 999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-------------CCCEEEEEECCCcEEEEEcCCCCc-eeEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-------------NGQFLATCSRDKSVWVWEVGEEDE-YECAAVIN 183 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-------------~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~ 183 (377)
|+.|++||+.++.......+..|...|.+++|+| ++.++++++.|+.|++||++.... ..+...+.
T Consensus 124 d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 203 (379)
T 3jrp_A 124 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 203 (379)
T ss_dssp TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe
Confidence 9999999998875444556778999999999999 689999999999999999986543 23445677
Q ss_pred ccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 184 AHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 184 ~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.|...|.+++|+|+ ++++++++.||.|++|++....... ........|...|++++|+|++.+|++++.||.|++|
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 89999999999999 8999999999999999988654221 1223345588899999999999999999999999999
Q ss_pred eeeC
Q psy18091 260 KEYK 263 (377)
Q Consensus 260 ~~~~ 263 (377)
++..
T Consensus 284 ~~~~ 287 (379)
T 3jrp_A 284 KENL 287 (379)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 9753
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=9.6e-29 Score=221.44 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=196.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
.+.+|...|++++|+|++++|++|+.|++|++|+.++. ... ....+|...+.+++ +++..+++++.++.+++|
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--~~~---~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--KRL---RNMTSHSARVGSLS--WNSYILSSGSRSGHIHHH 134 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEE---EEEECCSSCEEEEE--EETTEEEEEETTSEEEEE
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--eeE---EEecCccceEEEee--cCCCEEEEEecCCceEee
Confidence 45678899999999999999999999999999998742 111 12347877776654 557899999999999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEEeeCCcE---
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRFHPFDNI--- 200 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~--- 200 (377)
+...+.. ....+.+|...+..+.+.++++++++++.|+.|++||+++.... ........+...+..+.++|.+..
T Consensus 135 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 213 (318)
T 4ggc_A 135 DVRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 213 (318)
T ss_dssp ETTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEE
T ss_pred ecCCCce-eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEE
Confidence 9876643 34567789999999999999999999999999999999865422 222344567778999999997653
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+++++.++.|++|+...... .....+...+..+.|++.+..+++++ .|+.|++||....
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~-------------- 274 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGAC-----LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM-------------- 274 (318)
T ss_dssp EEECTTTCEEEEEETTTCCE-----EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--------------
T ss_pred EEecCCCCEEEEEecccccc-----cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC--------------
Confidence 34677889999999875543 22345677899999999999887654 7999999996422
Q ss_pred EEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
.++.++.+|. ..|++++|+|++.+|++++.|++|++|+..
T Consensus 275 -~~~~~l~gH~-~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 275 -AKVAELKGHT-SRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp -CEEEEECCCS-SCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred -cEEEEEcCCC-CCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 3467788864 589999999999999999999999999764
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=4.8e-29 Score=234.18 Aligned_cols=250 Identities=20% Similarity=0.373 Sum_probs=198.8
Q ss_pred cccccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
....+.+|.+.|++++| ++++|++|+.||+|++||..+.. . . ....+|...|.+++|++ .++++|+.|+.|
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~--~--~-~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i 235 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE--M--L-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSI 235 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC--E--E-EEECCCCSCEEEEECCT--TEEEEEETTSCE
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc--E--E-EEEcCCCCcEEEEEEcC--CEEEEeeCCCcE
Confidence 34568899999999999 78899999999999999987421 1 1 12347999999999974 599999999999
Q ss_pred EEEeCCCCceE-EeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFE-CNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~-~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
++||+.++... ....+.+|...|.+++| +++++++|+.||.|++||+++.. +...+..|...+.++.+ ++++
T Consensus 236 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 236 AVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE---FVRTLNGHKRGIACLQY--RDRL 308 (435)
T ss_dssp EEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEE--ETTE
T ss_pred EEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc---EEEEEcCCCCcEEEEEe--CCCE
Confidence 99999876532 33567889999999999 78899999999999999998764 34456788899998888 4789
Q ss_pred EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 201 LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 201 l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
+++|+.||.|++||++.... ...+.+|...|.+++| ++.+|++|+.||.|++||+......... ....
T Consensus 309 l~~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~------~~~~ 376 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAP------AGTL 376 (435)
T ss_dssp EEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSC------TTTT
T ss_pred EEEEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCcccc------ccch
Confidence 99999999999999986543 4667889999999998 6889999999999999997543321110 0111
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
+...+.+| ...|.+++| ++..|++++.||.|++|+....
T Consensus 377 ~~~~~~~h-~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 377 CLRTLVEH-SGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEEEECCC-SSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred heeeccCC-CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 45666665 458999998 5778999999999999987543
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9.8e-29 Score=225.55 Aligned_cols=257 Identities=18% Similarity=0.298 Sum_probs=188.0
Q ss_pred eccCcCceeEEEECCC---CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 93 SDGHQRTIRETAWSPC---GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
..+|...|.+++|+|+ |++|++|+.|+.|++||+.+........+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 3579999999999998 6999999999999999998733344466788999999999999999999999999999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEE--eeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRF--HPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
+...... ....|...|.++.| +|++.++++++.||.|++||++..+. ...+..|. .+.++.+. +..+
T Consensus 115 ~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~-~~~~~~~~--~~~~ 183 (368)
T 3mmy_A 115 LSSNQAI----QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP----MMVLQLPE-RCYCADVI--YPMA 183 (368)
T ss_dssp TTTTEEE----EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC----SEEEECSS-CEEEEEEE--TTEE
T ss_pred cCCCCce----eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE----EEEEecCC-CceEEEec--CCee
Confidence 9876432 24568899999999 88899999999999999999886543 23344444 56666665 4588
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC----EEEEEeCCCcEEEEEeCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD----LIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~~~d~~i~v~~~~~~~ 323 (377)
++++.|+.+++|+....... ...........+..+.+.+... .+++++.|+.+++|+.....
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSE--------------FRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEE--------------EEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred EEEeCCCcEEEEEeccccch--------------hhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 99999999999997533211 1111111122333344333332 39999999999999986543
Q ss_pred CCCcceeeeee-----eccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 324 GDSDMVSFDLV-----HTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 324 ~~~~~~~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.......+... .....+|..+|++++|+| ++.+|++|+.||.|++||++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTT
T ss_pred ccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCC
Confidence 11111111000 001123444899999999 4678999999999999999864
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=5.7e-30 Score=237.34 Aligned_cols=248 Identities=12% Similarity=0.054 Sum_probs=163.5
Q ss_pred cccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--------CCCEEEEEECCC
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--------CGNFIASASFDA 119 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--------~~~~l~s~s~d~ 119 (377)
+|.+.+....+.+++.+|++|+.|++||+||.+..............+|...|++++|+| ++++||+|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344445555556677889999999999999987421111111112468999999999997 789999999999
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeE--------------------
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYEC-------------------- 178 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~-------------------- 178 (377)
+|+|||+.++.. ...+.+|..+|.+++|+|++ .+|++++.|++|++||++.......
T Consensus 167 tv~~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 167 TLIIWRLTDEGP--ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEEEEEETTEE--EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred eEEEEECCCCce--eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 999999977643 34556788999999999987 4799999999999999976542110
Q ss_pred --EEEeeccccceeEEEEe-eCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEE------------------
Q psy18091 179 --AAVINAHIQDVKKVRFH-PFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWS------------------ 237 (377)
Q Consensus 179 --~~~~~~~~~~v~~~~~~-~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~------------------ 237 (377)
......|...+.++.|+ |+++.+++++.|+.+++||+...... ..+..|...+..
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY----NEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSCSEEEECSSCCSSC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC----ceEeeecCccccEEEccccccccccCccee
Confidence 01123566778888887 78999999999999999998654321 112222222222
Q ss_pred EEEcC-C-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEE
Q psy18091 238 LAFDR-I-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIR 315 (377)
Q Consensus 238 ~~~~~-~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 315 (377)
..|++ . +.++++|+.|++|++||...... .....+| ..+|.+++|+|++++|++++.+| +.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---------------~~~~~~~-~~~V~svafspdG~~LA~as~~G-v~ 383 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDS---------------NSIPIQL-GMPIVDFCWHQDGSHLAIATEGS-VL 383 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTC---------------CEEEEEC-SSCEEEEEECTTSSEEEEEESSE-EE
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcE---------------EEEecCC-CCcEEEEEEcCCCCEEEEEeCCC-eE
Confidence 23333 2 33567888999999999653321 1223343 45899999999999999998765 55
Q ss_pred EEE
Q psy18091 316 IFK 318 (377)
Q Consensus 316 v~~ 318 (377)
+|.
T Consensus 384 lvr 386 (393)
T 4gq1_A 384 LTR 386 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.7e-28 Score=228.47 Aligned_cols=255 Identities=13% Similarity=0.033 Sum_probs=196.0
Q ss_pred ccccccCCEEEEEECCCCCEE-EEEeCCCcEEEeecc--cCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKE--SFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~--~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.+.+|.+.|++++|+|+|++| ++|+.|++|++|++. .... ...+....|...|.+++|+|++++|++++.|+.+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 456788899999999999996 999999999999987 3211 1111122567889999999999999999999999
Q ss_pred EEEeCCCCceE--EeEEecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 122 AVWDKRSGQFE--CNATLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 122 ~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
.+|++.+++.. ....+.+|...|.+++|+|+ +++|++++.|+.|++||++...... ....+|...|.+++|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--KWLFGHKHFVSSICCG- 250 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--EECCCCSSCEEEEEEC-
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--eeecCCCCceEEEEEC-
Confidence 99998776532 22356679999999999999 9999999999999999998765332 2356788999999999
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecc-------------------------cCCcceEEEEEcCCCCeEEEee
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLK-------------------------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-------------------------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
++++|++++.|+.|++||+...... ..+. .....|.+++|+|++.+|++++
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNL----STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEE----EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEe----eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999999998765421 1111 2345789999999999999998
Q ss_pred -CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-------CCcEEEEEeCCC
Q psy18091 252 -DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------DDAIRIFKENPE 322 (377)
Q Consensus 252 -~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~v~~~~~~ 322 (377)
.|+.|++|++... ....+.+...+.++ ..+.+++|+|. .++++.+. ++.+++|.....
T Consensus 327 ~~d~~i~iw~~~~~----------~~~~l~~~~~~~~~--~~v~~~~~~~~-~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 327 EATKCIIILEMSEK----------QKGDLALKQIITFP--YNVISLSAHND-EFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp TTCSEEEEEEECSS----------STTCEEEEEEEECS--SCEEEEEEETT-EEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCCCeEEEEEeccC----------CCCceeeccEeccC--CceEEEEecCC-cEEEEEecccCCCCCCcceEEEEEEcC
Confidence 8999999997211 11123456666665 57999999994 45544433 556899987554
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.4e-28 Score=227.82 Aligned_cols=284 Identities=8% Similarity=0.020 Sum_probs=210.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+.+++|+|++.++++++.|++|++||..+.............+|...|.+++|+|+++++++++.|+.|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 34668999998888999999999999998742211100000123688899999999999999999999999999998876
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee----
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS---- 205 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s---- 205 (377)
.. ..+..|...+.+++|+|+++++++++ .|+.|++||+++... ...+.. ...+..++|+|+++.+++++
T Consensus 203 ~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 203 YK--ATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---IRKTDK-IGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp EE--EEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---EEECCC-CSEEEEEEECTTSSEEEEEEEESC
T ss_pred EE--EEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---EEEecC-CCCceEEEEcCCCCEEEEEECCCC
Confidence 43 45567889999999999999875554 799999999987632 223333 34588999999999998888
Q ss_pred ----CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 206 ----YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 206 ----~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
.||.|++||+..... .....|...+.+++|+|+++. +++++.|+.|++||.... .
T Consensus 277 ~~~~~dg~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---------------~ 336 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKL-----IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---------------K 336 (433)
T ss_dssp TTCSCCEEEEEEETTTTEE-----EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT---------------E
T ss_pred ccccCCCeEEEEECCCCcE-----EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC---------------c
Confidence 588999999875532 122345668899999999975 567789999999986321 2
Q ss_pred EEEeecCCCCcceeEEEecccCCEEEEEeC---------------CCcEEEEEeCCCCCCCcceeeeeeeccccceecce
Q psy18091 281 CVCTLSGHHGRTIYDISWCHLTDLIATACG---------------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDV 345 (377)
Q Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 345 (377)
+...+. +...+..++|+|+++.+++++. ||.+++|+....+ .+... . +...+
T Consensus 337 ~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---------~~~~~-~-~~~~~ 403 (433)
T 3bws_A 337 VQKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---------VKEFW-E-AGNQP 403 (433)
T ss_dssp EEEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---------EEEEE-E-CSSSE
T ss_pred EEEEec--CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---------EEEEe-c-CCCCC
Confidence 233333 2457889999999998888876 5699999865432 11111 1 23468
Q ss_pred eEEEecCCCCceEEEee-CCCcEEEEeccc
Q psy18091 346 NCVAWNPVVPGMLASCS-DDGDVKLWQIKL 374 (377)
Q Consensus 346 ~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~ 374 (377)
.+++|+|+ +..|++++ .|+.|++|++..
T Consensus 404 ~~~~~s~d-g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 404 TGLDVSPD-NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEECTT-SCEEEEEETTTTEEEEEEETT
T ss_pred ceEEEcCC-CCEEEEEECCCCeEEEEEecC
Confidence 99999995 55666555 699999999863
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3.4e-28 Score=219.76 Aligned_cols=220 Identities=18% Similarity=0.349 Sum_probs=177.5
Q ss_pred cccccccccCCEEEEEECC--CCCEEEEEeCCCcEEEeecccCCCccc----ceeeeeccCcCceeEEEECCC--CCEEE
Q psy18091 42 NSQTLKGHQGRVWNVSWNP--QGTMISSCGEDKNIRLWGKESFGNKFT----AKAILSDGHQRTIRETAWSPC--GNFIA 113 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~--~g~~l~s~s~D~~v~~W~~~~~~~~~~----~~~~~~~~h~~~V~~~~~~~~--~~~l~ 113 (377)
....+.+|.+.|++++|+| ++++|++|+.|++|++||......... .......+|...|.+++|+|+ +++|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 3456789999999999999 699999999999999999875321110 112223579999999999999 99999
Q ss_pred EEECCCcEEEEeCCCCceEEeE-----------EecCccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 114 SASFDATTAVWDKRSGQFECNA-----------TLEGHENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 114 s~s~d~~i~iwd~~~~~~~~~~-----------~~~~h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
+++.|+.|++||+.+++..... ....|...+.+++|+|+ +.++++++.++.+.+|+.... .....
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~ 207 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVA 207 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeee
Confidence 9999999999998876522111 11267889999999997 899999999999977776554 33445
Q ss_pred EEeeccccceeEEEEeeCC----cEEEEeeCCCcEEEEecCcccc-----------------------------------
Q psy18091 180 AVINAHIQDVKKVRFHPFD----NILASASYDDTVKLFKEDKAEA----------------------------------- 220 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~----~~l~s~s~dg~i~~~~~~~~~~----------------------------------- 220 (377)
..+..|...|.+++|+|++ ++|++++.||.|++||++....
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 5677899999999999998 8999999999999999875311
Q ss_pred -------cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 221 -------DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 221 -------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.......+.+|...|++++|+|++.+|++++.||.|++|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 112345677899999999999999999999999999999975
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=7.2e-28 Score=225.88 Aligned_cols=220 Identities=22% Similarity=0.418 Sum_probs=178.7
Q ss_pred ccccccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCccc--ceeeeeccCcCceeEEEECC-CCCEEEEEE
Q psy18091 41 INSQTLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFT--AKAILSDGHQRTIRETAWSP-CGNFIASAS 116 (377)
Q Consensus 41 ~~~~~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s 116 (377)
.....+.+|.+.|++++|+|++. +|++|+.||+|++|++........ .......+|...|.+++|+| ++.+|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 34456789999999999999998 999999999999999875221111 00122347999999999999 678999999
Q ss_pred CCCcEEEEeCCCCc-eEEeEEecCccCCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 117 FDATTAVWDKRSGQ-FECNATLEGHENEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 ~d~~i~iwd~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.|+.|++||++++. ......+..|...|++++|+|+++ .+++|+.||.|++||++.... +...+..|...|.++.|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQW 329 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEE
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEE
Confidence 99999999998763 123455678999999999999987 688999999999999987432 23456678999999999
Q ss_pred eeCCc-EEEEeeCCCcEEEEecCccccc----------ceeeeecccCCcceEEEEEcCCCC-eEEEeeCCCcEEEEeee
Q psy18091 195 HPFDN-ILASASYDDTVKLFKEDKAEAD----------WINFATLKSHTSTVWSLAFDRIGS-RLATCSDDATVKIWKEY 262 (377)
Q Consensus 195 ~~~~~-~l~s~s~dg~i~~~~~~~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~ 262 (377)
+|++. ++++++.||.|++|++...... ...+....+|...|++++|+|++. +|++++.|+.|++|++.
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 99984 7999999999999998762210 123456778999999999999999 89999999999999864
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.5e-28 Score=219.29 Aligned_cols=241 Identities=15% Similarity=0.091 Sum_probs=177.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCC-----CcccceeeeeccCcCceeEEEECC--CCCEEEEEECCCcEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-----NKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDATTA 122 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~-----~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~~i~ 122 (377)
.+.|.++.|+|+ +++++.|++|++|+..... ...........+|...|.+++|+| +++++++++.|+.|+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 356777888888 9999999999999765210 000101122346778899999999 999999999999999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec-cccceeEEEEeeCCcEE
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA-HIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 201 (377)
+||+.+++... .....|...+.+++|+|++.++++|+.||.|++||+++..... ..+.. |...|.+++|+|++.+|
T Consensus 153 ~wd~~~~~~~~-~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~--~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 153 FQSYEDDSQYI-VHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQAS--SRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp EEESSSSCEEE-EECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCC--EECCCCTTSCEEEEEECTTSSEE
T ss_pred EEECCCCcEEE-EEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCc--cEEeccCCCCEEEEEEeCCCCEE
Confidence 99999886522 1223456689999999999999999999999999999875431 23455 89999999999999999
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceE--EEEEcCCCCeEEEeeC-CCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVW--SLAFDRIGSRLATCSD-DATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~l~s~s~-D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
++++. +.|++||++..... ..+..+..|...+. +++|+|+|++|++++. |+.|++|+..+... .
T Consensus 230 ~s~~~-~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~-----------~ 296 (343)
T 3lrv_A 230 VVECD-QTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK-----------N 296 (343)
T ss_dssp EEEES-SBEEEEETTSSTTC-BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC-----------S
T ss_pred EEEeC-CeEEEEEcCCCCcc-eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc-----------c
Confidence 99994 59999999865431 11222222434443 6999999999999998 99999998743321 1
Q ss_pred EEEEEeecCCCCcceeEEEecc---cCCEEEEEeCCCcEEEEE
Q psy18091 279 WKCVCTLSGHHGRTIYDISWCH---LTDLIATACGDDAIRIFK 318 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~v~~ 318 (377)
|.. .++..+.|.+ +...+++++.|+.+.++-
T Consensus 297 ~~~---------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 297 WTK---------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEE---------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred eEe---------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 221 2456677777 677899999999999874
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.7e-26 Score=213.34 Aligned_cols=267 Identities=12% Similarity=0.073 Sum_probs=196.3
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCcc
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHE 141 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h~ 141 (377)
.++++++.|++|++||..+. .. ... ...| ..+.+++|+|+++++ ++++.|+.|++||+.+++.. ..+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~--~~--~~~-~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN--KV--TAT-IPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT--EE--EEE-EECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECS-
T ss_pred EEEEEcCCCCEEEEEECCCC--eE--EEE-eecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEECC-
Confidence 46889999999999998742 11 111 1234 468999999999976 67778999999999988654 334433
Q ss_pred CCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCccc
Q psy18091 142 NEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~ 219 (377)
..+.+++|+|++++++.+ +.++.|++||+.+.... ..+. +...+..++|+|+++.+ ++++.++.|++||+...+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~---~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA---GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE---EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE---EEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 389999999999987554 46799999999876432 2333 33568899999999877 788889999999987554
Q ss_pred ccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW 298 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 298 (377)
. ...+..+ ..+.+++|+|+++++ ++++.|+.|++||.... .+...+.. ...+..++|
T Consensus 150 ~----~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~ 207 (391)
T 1l0q_A 150 V----INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---------------SVIDTVKV--EAAPSGIAV 207 (391)
T ss_dssp E----EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---------------EEEEEEEC--SSEEEEEEE
T ss_pred E----EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---------------eEEEEEec--CCCccceEE
Confidence 3 2233334 457899999999887 67788999999996421 22333332 347889999
Q ss_pred cccCCEEEEEe---CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 299 CHLTDLIATAC---GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 299 ~~~~~~l~~~~---~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+++.+++++ .++.+++|+....+ .+.. ...|. .+.+++|+|++..++++++.|+.|++||++..
T Consensus 208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~-~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 208 NPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITAR-IPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEE-EECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEE-EecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 99999888888 78999999875432 1111 11233 57899999965555588999999999999754
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=8.2e-27 Score=206.40 Aligned_cols=305 Identities=13% Similarity=0.140 Sum_probs=174.7
Q ss_pred ccCCcCCCccceeeeeccccccccccccccc----CCEEEEEECCCCC---EEEEEeCCCcEEEeecccCCCcccceeee
Q psy18091 20 TIPSTENLTGTNLILCSRCEMINSQTLKGHQ----GRVWNVSWNPQGT---MISSCGEDKNIRLWGKESFGNKFTAKAIL 92 (377)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~----~~V~~v~~~~~g~---~l~s~s~D~~v~~W~~~~~~~~~~~~~~~ 92 (377)
++|.-.++.+-++..-++ |+.-. -.|.++.|-..|- .+++++. .+|++|+.... ..+... ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~-~~~~~~-~~ 81 (356)
T 2w18_A 13 ELPASDSINPGNLQLVSE--------LKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDA-WQWEKL-YT 81 (356)
T ss_dssp -----------CEEEEEE--------ECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSS-SBEEEE-EE
T ss_pred cCccccCcCcceeeeeeh--------hcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCC-ccceee-EE
Confidence 356556666655555333 33322 2466777765543 5777776 58999998752 222222 22
Q ss_pred eccCcCceeEEEECCCCCEEEE-E-ECCCcEEEEeC----CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE--CCCc
Q psy18091 93 SDGHQRTIRETAWSPCGNFIAS-A-SFDATTAVWDK----RSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--RDKS 164 (377)
Q Consensus 93 ~~~h~~~V~~~~~~~~~~~l~s-~-s~d~~i~iwd~----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--~dg~ 164 (377)
..+|..+|..+.+.|+-.-|+. + +.=..-.++-+ ..+.........+|...|..+ ++++.+.+++ .|+.
T Consensus 82 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~ 158 (356)
T 2w18_A 82 WHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQ 158 (356)
T ss_dssp EECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCE
T ss_pred EeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCc
Confidence 3467777777777775332221 1 11111111111 100001111112333334333 4555555533 5899
Q ss_pred EEEEEcCCCCceeEEEEeeccccceeEEEEee---CCcEEEEeeCCCcEEEEecCcccccceeeeecccC---CcceEEE
Q psy18091 165 VWVWEVGEEDEYECAAVINAHIQDVKKVRFHP---FDNILASASYDDTVKLFKEDKAEADWINFATLKSH---TSTVWSL 238 (377)
Q Consensus 165 v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h---~~~v~~~ 238 (377)
|++|++...... ......|...++.++|+| ++..|++++.|++|++||+...+. +..+.+| ...+.++
T Consensus 159 V~~~~~s~dG~~--~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~----l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 159 VEVMTFAEDGGG--KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL----LKKMHIDDSYQASVCHK 232 (356)
T ss_dssp EEEEEECTTSCE--EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE----EEEEECCC---CCCEEE
T ss_pred EEEEEECCCCce--eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE----EEEEcCCCcceeeeEEE
Confidence 999998553322 334567888899999999 679999999999999999986653 3444443 3467888
Q ss_pred EEcCCCCeE------------EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee-----cCCCCcceeEEEeccc
Q psy18091 239 AFDRIGSRL------------ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-----SGHHGRTIYDISWCHL 301 (377)
Q Consensus 239 ~~~~~~~~l------------~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~ 301 (377)
+|+|+|.++ ++|+.|++|++||.... +++.++ .+|.+. +.+..+ .
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---------------k~l~v~~~~~p~Gh~~~-~lsg~~--s 294 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT---------------LSVGVMLYCLPPGQAGR-FLEGDV--K 294 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTT---------------EEEEEEEECCCTTCCCC-EEEEEE--E
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC---------------EEEEEEEeeccCCCcce-eEcccc--C
Confidence 999999876 67889999999985321 222222 244332 333333 3
Q ss_pred CCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 302 TDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+.++++++.|++|++|+....+ ++. ...+|...+. +++|+| ++.+|+||+.|++|||||+.
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk---------~l~-tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQ---------CTA-LLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCS---------EEE-EECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEEC
T ss_pred CCEEEEEcCCCcEEEEECCCCc---------EEE-EecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecCC
Confidence 6689999999999999986654 122 2346776554 689999 57789999999999999963
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=239.76 Aligned_cols=219 Identities=24% Similarity=0.505 Sum_probs=184.0
Q ss_pred cccccccccCCEEEEEECCC--CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC--CCEEEEEEC
Q psy18091 42 NSQTLKGHQGRVWNVSWNPQ--GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC--GNFIASASF 117 (377)
Q Consensus 42 ~~~~l~~h~~~V~~v~~~~~--g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~--~~~l~s~s~ 117 (377)
....+.+|.++|++++|+|+ +++|++|+.||+|++||+... ... ......+|...|.+++|+|+ ++++++|+.
T Consensus 45 ~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~--~~~-~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG--RWS-QIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT--EEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC--ccc-ccccccCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 34578899999999999988 999999999999999998742 111 12234579999999999999 999999999
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcC-------------CCCEEEEEECCCcEEEEEcCCCCce-eEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSK-------------NGQFLATCSRDKSVWVWEVGEEDEY-ECAAVIN 183 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~-------------~~~~l~s~~~dg~v~~wd~~~~~~~-~~~~~~~ 183 (377)
|+.|++||+.++.......+.+|...|.+++|+| ++.++++|+.||.|++||++..... .+...+.
T Consensus 122 dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~ 201 (753)
T 3jro_A 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (753)
T ss_dssp TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec
Confidence 9999999998775445566788999999999999 5899999999999999999876432 4445677
Q ss_pred ccccceeEEEEeeC---CcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 184 AHIQDVKKVRFHPF---DNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 184 ~~~~~v~~~~~~~~---~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
.|...|.+++|+|+ +.++++|+.||.|++|+........ ........|...|++++|+|+|.+|++++.||.|++|
T Consensus 202 ~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 202 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 89999999999999 8999999999999999988654221 1233445688899999999999999999999999999
Q ss_pred eeeC
Q psy18091 260 KEYK 263 (377)
Q Consensus 260 ~~~~ 263 (377)
+...
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9764
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.2e-26 Score=212.02 Aligned_cols=251 Identities=14% Similarity=0.170 Sum_probs=172.8
Q ss_pred ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCC
Q psy18091 94 DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGE 172 (377)
Q Consensus 94 ~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~ 172 (377)
..|...|.+++|+|+|++|++|+.++ +++||..+++..... +...+..+++.++++.+ ++++.|++|++||+.+
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ----EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE----ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee----ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 46899999999999999999988665 789998876543222 22357788888888876 5678889999999987
Q ss_pred CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE--e
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT--C 250 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~ 250 (377)
.... ..+. +...+.++.++++. ++++ .++.|++|++...... +..+.. +...+++++ .+++. |
T Consensus 91 ~~~~---~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~---~~~~~~---~~~~~~~s~--~~la~~sg 155 (355)
T 3vu4_A 91 KQDV---SRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR---ITDDIR---FGGVCEFSN--GLLVYSNE 155 (355)
T ss_dssp TEEE---EEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB---SSCCEE---EEEEEEEET--TEEEEEES
T ss_pred CcEE---EEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee---eEEecc---CCceEEEEc--cEEEEeCC
Confidence 7433 2333 56689999998754 3333 4789999998765111 122222 344456666 56665 6
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEE-EEeecCCCCcceeEEEecccCCEEEEEeCCCc-EEEEEeCCCCCCCcc
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKC-VCTLSGHHGRTIYDISWCHLTDLIATACGDDA-IRIFKENPEAGDSDM 328 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~~~~~~~~~~~~ 328 (377)
+.||.|++||+.................... ...+.+| ...|.+++|+|++.+|++++.|++ +++|+....+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h-~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~----- 229 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH-TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV----- 229 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCC-SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-----
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEcc-CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-----
Confidence 8999999999764321110000000000111 4556665 568999999999999999999998 9999976543
Q ss_pred eeeeeeeccccc-eecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 329 VSFDLVHTEHRA-HNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 329 ~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.....+ |..+|++++|+| ++.+|++|+.|++|+|||++..
T Consensus 230 ----~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 230 ----LVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ----EEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEESSCC
T ss_pred ----EEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEccCC
Confidence 12222334 899999999999 5778999999999999999754
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=7.6e-25 Score=202.18 Aligned_cols=296 Identities=13% Similarity=0.082 Sum_probs=203.2
Q ss_pred cccccccCCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE-EECCCcE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS-ASFDATT 121 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s-~s~d~~i 121 (377)
..+.+|. .+.+++|+|+|+++ ++++.|++|++||..+. .. ...+ .+...+.+++|+|++++|+. ++.++.|
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--~~--~~~~--~~~~~v~~~~~spdg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN--NV--IATV--PAGSSPQGVAVSPDGKQVYVTNMASSTL 98 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--EE--EEEE--ECSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC--eE--EEEE--ECCCCccceEECCCCCEEEEEECCCCEE
Confidence 3455565 48999999999976 67779999999998642 11 1112 23348999999999998754 4567999
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
++||+.+++.. ..+.. ...+.+++|+|+++++ ++++.++.|++||+.+... ...+..+ ..+..+.|+|+++.
T Consensus 99 ~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~-~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 99 SVIDTTSNTVA--GTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV---INTVSVG-RSPKGIAVTPDGTK 171 (391)
T ss_dssp EEEETTTTEEE--EEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE---EEEEECC-SSEEEEEECTTSSE
T ss_pred EEEECCCCeEE--EEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEecC-CCcceEEECCCCCE
Confidence 99999988654 33333 4578999999999977 6888899999999987643 2333333 45688999999987
Q ss_pred E-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 201 L-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 201 l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+ ++++.++.|++||++.... ... ..+...+.+++|+|++++|++++ .|+.|++||....
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~----~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~------------ 234 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSV----IDT-VKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN------------ 234 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEE----EEE-EECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT------------
T ss_pred EEEEeCCCCEEEEEECCCCeE----EEE-EecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC------------
Confidence 7 6778899999999876542 122 23556789999999999988887 6899999996321
Q ss_pred CcEEEEEeecCCCCcceeEEEecccCCEE-EEEeCCCcEEEEEeCCCCCCCcce----e---eeeeeccccceecceeEE
Q psy18091 277 SVWKCVCTLSGHHGRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMV----S---FDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~~~~~~~~~~~~~----~---~~~~~~~~~~h~~~v~~v 348 (377)
.....+..+. .+..+.|+|+++.+ ++++.|+.+++|+....+....+. . ...+.....++..++...
T Consensus 235 ---~~~~~~~~~~--~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~f 309 (391)
T 1l0q_A 235 ---KITARIPVGP--DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADF 309 (391)
T ss_dssp ---EEEEEEECCS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCE
T ss_pred ---eEEEEEecCC--CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccc
Confidence 2334444432 57889999999876 666789999999876432110000 0 000001111112222333
Q ss_pred EecCCC-------CceEEEeeCCCcEEEEecccC
Q psy18091 349 AWNPVV-------PGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 349 ~~~p~~-------~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..++.. ...+.+.+.|..+++||+...
T Consensus 310 s~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 310 KSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp EESCCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred ccccccccccccceEEEEeCCCCceEEEEECCCC
Confidence 332211 145778889999999998643
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.1e-26 Score=203.83 Aligned_cols=252 Identities=10% Similarity=0.066 Sum_probs=162.1
Q ss_pred ccccccccCCEEEEEECCCCCEE--EEEeCCCcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEE--C
Q psy18091 43 SQTLKGHQGRVWNVSWNPQGTMI--SSCGEDKNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASAS--F 117 (377)
Q Consensus 43 ~~~l~~h~~~V~~v~~~~~g~~l--~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s--~ 117 (377)
..++++|+.+|..|.+.||-.-| ++-|+=..--++.+..... ....+.+...+|...|.++ ++++.+.+++ .
T Consensus 79 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~ 155 (356)
T 2w18_A 79 LYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLS 155 (356)
T ss_dssp EEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSST
T ss_pred eEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCC
Confidence 34677888888888888864322 2222111111221110000 0011122223444444443 4555555533 4
Q ss_pred CCcEEEEeCC-CCceEEeEEecCccCCEEEEEEcC---CCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc---cccee
Q psy18091 118 DATTAVWDKR-SGQFECNATLEGHENEVKSVTWSK---NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH---IQDVK 190 (377)
Q Consensus 118 d~~i~iwd~~-~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~---~~~v~ 190 (377)
|+.|++|++. +|+. ...+.+|...++.++|+| ++.+|++++.|++|++||++++..+ ..+..| ...+.
T Consensus 156 d~~V~~~~~s~dG~~--~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l---~tL~g~~~~v~~v~ 230 (356)
T 2w18_A 156 DQQVEVMTFAEDGGG--KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL---KKMHIDDSYQASVC 230 (356)
T ss_dssp TCEEEEEEECTTSCE--EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE---EEEECCC---CCCE
T ss_pred CCcEEEEEECCCCce--eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE---EEEcCCCcceeeeE
Confidence 8999999984 4653 345567888899999998 7799999999999999999987533 334443 34677
Q ss_pred EEEEeeCCcEE------------EEeeCCCcEEEEecCcccccceeee-ecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 191 KVRFHPFDNIL------------ASASYDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 191 ~~~~~~~~~~l------------~s~s~dg~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
+++|+|++.++ ++|+.|++|++|+............ ...+|...+.+..++ +.++++++.|++|+
T Consensus 231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIk 308 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIA 308 (356)
T ss_dssp EEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEE
T ss_pred EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEE
Confidence 88999999876 5688899999999875542110000 024666665555544 78899999999999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
+||+.. .++..++.+|+...+..++|+|++++|++|+.|++|++|+.
T Consensus 309 IWDl~t---------------Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 309 IWDLLL---------------GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTT---------------CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEECCC---------------CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999642 24577888887655667999999999999999999999974
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.2e-23 Score=196.81 Aligned_cols=242 Identities=11% Similarity=0.113 Sum_probs=186.4
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~i 123 (377)
.+.+|.+.|++++|+|++.++++++.|++|++||.+.. ... .. ...|...+.+++|+|++++++ +++.|+.|++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~ 238 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--AYK--AT-VDLTGKWSKILLYDPIRDLVYCSNWISEDISV 238 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--CEE--EE-EECSSSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--eEE--EE-EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEE
Confidence 45689999999999999999999999999999998642 111 11 236788899999999999885 4457999999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE--------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
||+.+++.. ..+.. ...+.+++|+|+++++++++ .|+.|++||+++..... . ..+...+..++|+
T Consensus 239 ~d~~~~~~~--~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~---~-~~~~~~~~~~~~~ 311 (433)
T 3bws_A 239 IDRKTKLEI--RKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID---T-IGPPGNKRHIVSG 311 (433)
T ss_dssp EETTTTEEE--EECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE---E-EEEEECEEEEEEC
T ss_pred EECCCCcEE--EEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe---e-ccCCCCcceEEEC
Confidence 999888643 33443 35699999999999999888 58899999998764322 1 2344578889999
Q ss_pred eCCc-EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC---------------CCcEEEE
Q psy18091 196 PFDN-ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD---------------DATVKIW 259 (377)
Q Consensus 196 ~~~~-~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---------------D~~i~iw 259 (377)
|+++ ++++++.++.|++|+...... ...+ .+...+.+++|+|+|+++++++. ||.|++|
T Consensus 312 ~~g~~l~~~~~~~~~v~v~d~~~~~~----~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 312 NTENKIYVSDMCCSKIEVYDLKEKKV----QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp SSTTEEEEEETTTTEEEEEETTTTEE----EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred CCCCEEEEEecCCCEEEEEECCCCcE----EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 9996 556778999999999875432 1222 36678999999999998888776 5799999
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeC
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKEN 320 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~ 320 (377)
|.... .....+.+ ...+..++|+|+++.|++++. |+.+++|+..
T Consensus 387 d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 387 DTTTD---------------TVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ETTTT---------------EEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ECCCC---------------cEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 85321 22334443 346899999999999988875 9999999753
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.5e-24 Score=200.79 Aligned_cols=281 Identities=12% Similarity=0.047 Sum_probs=200.2
Q ss_pred cCCEEEEEECCCCC-EEEEEe----CCC----cEEEeec--ccCCCcccceeeeeccCcCceeEEEECC-----------
Q psy18091 50 QGRVWNVSWNPQGT-MISSCG----EDK----NIRLWGK--ESFGNKFTAKAILSDGHQRTIRETAWSP----------- 107 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s----~D~----~v~~W~~--~~~~~~~~~~~~~~~~h~~~V~~~~~~~----------- 107 (377)
...++...|.+.|. ++++|+ .|| +|++||+ .+. ... ......+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-TVL--AQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT-CEE--EEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC-CEE--eeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 35777888888875 566887 467 8999998 642 111 1111246777777666654
Q ss_pred ---CCCEEEEEECC------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC---cEEEEEcCCCCc
Q psy18091 108 ---CGNFIASASFD------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDE 175 (377)
Q Consensus 108 ---~~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~~wd~~~~~~ 175 (377)
.+..++.++.+ +.|++||+..+.. ..+.+|...+.+++|+|+|+++++++.++ .|++||+.+...
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCCCCC---EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE
Confidence 25677766654 7999999976543 45567889999999999999999999885 999999987643
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEE-EeeCCCc--EEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILA-SASYDDT--VKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~dg~--i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
. .+..|...+..++|+|+++.|+ +++.++. |++||+.... ...+..|...+.+++|+|+|++|+.++.
T Consensus 216 ~----~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~ 286 (415)
T 2hqs_A 216 R----QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSD 286 (415)
T ss_dssp E----EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred E----EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEEC
Confidence 2 3455677899999999999887 6666665 8888987543 2456678888999999999999998876
Q ss_pred -CC--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC---CcEEEEEeCCCCCCC
Q psy18091 253 -DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD---DAIRIFKENPEAGDS 326 (377)
Q Consensus 253 -D~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~~~~~~~~~~ 326 (377)
++ .|.+||...... ..+.. ++..+..+.|+|+++.|+.++.+ ..+.+|+....+.
T Consensus 287 ~~g~~~i~~~d~~~~~~----------------~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-- 347 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAP----------------QRITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-- 347 (415)
T ss_dssp TTSSCEEEEEETTSSCC----------------EECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--
T ss_pred CCCCcEEEEEECCCCCE----------------EEEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--
Confidence 55 455556432110 11222 24478889999999998888764 5788887654321
Q ss_pred cceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC---cEEEEecccC
Q psy18091 327 DMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG---DVKLWQIKLE 375 (377)
Q Consensus 327 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg---~i~iWd~~~~ 375 (377)
.. ...|. .+.+++|+|+ +..|++++.|+ .|++||+..+
T Consensus 348 --------~~-l~~~~-~~~~~~~spd-g~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 348 --------QV-LSSTF-LDETPSLAPN-GTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp --------EE-CCCSS-SCEEEEECTT-SSEEEEEEEETTEEEEEEEETTSC
T ss_pred --------EE-ecCCC-CcCCeEEcCC-CCEEEEEEcCCCccEEEEEECCCC
Confidence 01 12233 7899999995 66778887776 7999998754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=6e-24 Score=198.17 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=193.9
Q ss_pred cccccccCCEEEEEECC--------------CCCEEEEEeCC------CcEEEeecccCCCcccceeeeeccCcCceeEE
Q psy18091 44 QTLKGHQGRVWNVSWNP--------------QGTMISSCGED------KNIRLWGKESFGNKFTAKAILSDGHQRTIRET 103 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~--------------~g~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~ 103 (377)
..+.+|...+..+++++ .+.+++.++.+ ++|++||.+. .. .. ...+|...|.++
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g--~~--~~--~l~~~~~~v~~~ 184 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG--YN--QF--VVHRSPQPLMSP 184 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS--CS--CE--EEEEESSCEEEE
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC--CC--CE--EEeCCCCcceee
Confidence 45777877777776664 26677666664 7999999862 11 11 123588899999
Q ss_pred EECCCCCEEEEEECCC---cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCc--EEEEEcCCCCcee
Q psy18091 104 AWSPCGNFIASASFDA---TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS--VWVWEVGEEDEYE 177 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~--v~~wd~~~~~~~~ 177 (377)
+|+|+|++|++++.++ .|++||+.+++.. .+..|...+.+++|+|+|++|+ +++.++. |++||+.+...
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~---~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-- 259 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-- 259 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--
Confidence 9999999999999885 9999999988653 4556788999999999999877 6666655 99999987532
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeC-CC--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC-
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASY-DD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
..+..|...+..+.|+|+++.|++++. ++ .|.+|+...... ..+..|...+.+++|+|+|++|++++.+
T Consensus 260 --~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 260 --RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp --EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred --EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 235567778999999999999988876 45 466667664432 2344566788999999999999988765
Q ss_pred --CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC---cEEEEEeCCCCCCCcc
Q psy18091 254 --ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD---AIRIFKENPEAGDSDM 328 (377)
Q Consensus 254 --~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~v~~~~~~~~~~~~ 328 (377)
..|++||..... ...+..+ . .+..++|+|++++|+.++.++ .+.+|+.....
T Consensus 333 g~~~i~~~d~~~~~----------------~~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----- 389 (415)
T 2hqs_A 333 GQQHIAKQDLATGG----------------VQVLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----- 389 (415)
T ss_dssp SCEEEEEEETTTCC----------------EEECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-----
T ss_pred CceEEEEEECCCCC----------------EEEecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-----
Confidence 579999863211 1223333 2 788999999999998888776 67788754321
Q ss_pred eeeeeeeccccceecceeEEEecCC
Q psy18091 329 VSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 329 ~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
. ....+|...|.+++|+|.
T Consensus 390 -----~-~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 390 -----K-ARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -----E-EECCCSSSEEEEEEECCC
T ss_pred -----E-EEeeCCCCCCcCCccccc
Confidence 1 123468889999999994
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.1e-22 Score=181.91 Aligned_cols=289 Identities=11% Similarity=0.113 Sum_probs=188.9
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-CcEEEEeCC--CCceEEeEEecCc
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-ATTAVWDKR--SGQFECNATLEGH 140 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-~~i~iwd~~--~~~~~~~~~~~~h 140 (377)
++++++.|+.|++|+++..+ ... .+....|...+..++|+|++++|++++.+ +.+.+|++. +++......+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEG-ALT--LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTS-CEE--EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCC-cEE--EeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 44555889999999986311 111 12223466788999999999999988887 999999987 6665555555544
Q ss_pred cCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCc-
Q psy18091 141 ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDK- 217 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~- 217 (377)
. .+..++|+|+++++++++. ++.|.+||+.............. ...+..++|+|+++++++++ .++.|.+|++..
T Consensus 84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 4 7889999999998877665 88899999953222222333332 34578899999999887777 899999999875
Q ss_pred ccccceeee--ecc-cCCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC-C-Cc
Q psy18091 218 AEADWINFA--TLK-SHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-H-GR 291 (377)
Q Consensus 218 ~~~~~~~~~--~~~-~h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 291 (377)
... .... ... .....+..++|+|++++++. +..++.|++|+........ ........+... . ..
T Consensus 162 ~~~--~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~--------~~~~~~~~~~~~~~~~~ 231 (343)
T 1ri6_A 162 GHL--VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI--------ECVQTLDMMPENFSDTR 231 (343)
T ss_dssp SCE--EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC--------EEEEEEECSCTTCCSCC
T ss_pred Cce--eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcE--------EEEeeccccCccccccC
Confidence 221 1111 122 23446888999999997654 4589999999974211100 001111111111 1 23
Q ss_pred ceeEEEecccCCEEEEE-eCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 292 TIYDISWCHLTDLIATA-CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 292 ~v~~~~~~~~~~~l~~~-~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
.+..++|+|+++.|+++ ..++.+++|+.....+.. . .+... ..+. .+.+++|+|++..+++++..|+.|++|
T Consensus 232 ~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~--~---~~~~~-~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 232 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL--S---KEGFQ-PTET-QPRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE--E---EEEEE-ECSS-SCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred CccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce--E---Eeeee-cCCC-ccceEEECCCCCEEEEecCCCCeEEEE
Confidence 56689999999877644 479999999986422211 1 11111 1122 388999999644444455578999999
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
++..
T Consensus 305 ~~d~ 308 (343)
T 1ri6_A 305 EIVG 308 (343)
T ss_dssp EEET
T ss_pred EEcC
Confidence 7653
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2.1e-23 Score=208.62 Aligned_cols=284 Identities=11% Similarity=0.109 Sum_probs=201.2
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CC-----cEEEeecccCCCcccceeeeeccCc------------------------Cc
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DK-----NIRLWGKESFGNKFTAKAILSDGHQ------------------------RT 99 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~-----~v~~W~~~~~~~~~~~~~~~~~~h~------------------------~~ 99 (377)
...+.+++|+|||++|++++. |+ +|++||..+.. . ..+. ..+. ..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~--~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ--T--RLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC--E--EEEE-CGGGTC--------------------CCEE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc--e--eEcc-chhhcccccccccchhhhhhhhhhhccccC
Confidence 457999999999999999998 88 89999987421 1 1111 1221 23
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCC---ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSG---QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
|.+++|+|+|++|++++. +.|.+||+.++ +.. .+..|...+..++|+|||++++.++. +.|++||+.+....
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE
Confidence 788999999999999886 99999999887 432 35567788999999999999998874 68999999875322
Q ss_pred eEEEEeecccc----------------ceeEEEEeeCCcEEEEeeCCC--------------------------------
Q psy18091 177 ECAAVINAHIQ----------------DVKKVRFHPFDNILASASYDD-------------------------------- 208 (377)
Q Consensus 177 ~~~~~~~~~~~----------------~v~~~~~~~~~~~l~s~s~dg-------------------------------- 208 (377)
.....+.. .+..+.|+|+|+.|++++.|+
T Consensus 186 ---~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 186 ---QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp ---ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred ---EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 11222222 146789999999999988765
Q ss_pred -cEEEEecCc-ccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-----CCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 209 -TVKLFKEDK-AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-----DATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 209 -~i~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
.|.+||+.. .... .+.....|...+.+++| |+|++|+.++. +..|++||..... +
T Consensus 263 ~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---------------~ 324 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---------------Q 324 (741)
T ss_dssp EEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---------------E
T ss_pred eEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---------------e
Confidence 678888765 4421 11111257788999999 99999987654 5678889853211 1
Q ss_pred EEeecCCCCc---ceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE-EecCCCCce
Q psy18091 282 VCTLSGHHGR---TIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPGM 357 (377)
Q Consensus 282 ~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~ 357 (377)
...+..+... .+..+.|+|+++++++++.++.+++|....... . .....|...|..+ +|+|++..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~-------~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---A-------AALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---E-------EESCCSSSCEEEEEEEETTTTEE
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---e-------eeeeecceEEEeEeEEeCCCCEE
Confidence 2222222222 345789999999999999999999998753221 1 1123456678776 699965555
Q ss_pred EEEeeCCC--cEEEEeccc
Q psy18091 358 LASCSDDG--DVKLWQIKL 374 (377)
Q Consensus 358 laS~s~Dg--~i~iWd~~~ 374 (377)
+++++.|+ .++||++..
T Consensus 395 ~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEECSSCTTCBEEEEEET
T ss_pred EEEEeCCCCceEEEEEEEc
Confidence 56777777 899999864
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.2e-22 Score=193.54 Aligned_cols=303 Identities=12% Similarity=0.111 Sum_probs=208.7
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeec--ccCCCcccceeeeeccCcCceeEEEECC----CCCEEEEEEC-CCcEEEEe
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGK--ESFGNKFTAKAILSDGHQRTIRETAWSP----CGNFIASASF-DATTAVWD 125 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~--~~~~~~~~~~~~~~~~h~~~V~~~~~~~----~~~~l~s~s~-d~~i~iwd 125 (377)
++.++|+|||++|++++.|++|++||. .+. .. ...+ .+...+..++|+| +|+++++++. ++.|.+||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--~~--~~~i--~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--TK--VAEI--KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--EE--EEEE--ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCC--cE--EEEE--ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 899999999999999999999999998 431 11 1112 2445678999999 9999998885 89999999
Q ss_pred CCCCceEEeEEecC--------cc-CCEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEe
Q psy18091 126 KRSGQFECNATLEG--------HE-NEVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 126 ~~~~~~~~~~~~~~--------h~-~~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~ 195 (377)
..+++........+ |. ..+..+.++|++. ++++...++.|.+||..+...... ..+. +...+..+.|+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~-~~i~-~~~~~~~~~~s 332 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV-TSIG-AAPFLHDGGWD 332 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE-EEEE-CCSSCCCEEEC
T ss_pred ccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee-EEec-cCcCccCceEC
Confidence 98876543322211 22 3789999999765 567778899999999987654332 1222 34567788999
Q ss_pred eCCcEEEEe-eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC-CCeEEEee-CCCcEEEEeeeCCCCCCCCCC
Q psy18091 196 PFDNILASA-SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI-GSRLATCS-DDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 196 ~~~~~l~s~-s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~ 272 (377)
|++++++++ ..+++|.+||....+...........|......+ ++|+ +..+++++ .|++|.+|++...+.
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~------ 405 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH------ 405 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC------
T ss_pred CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC------
Confidence 999976655 5689999999876543111000112365444443 4676 66777776 689999999643211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-------CCCcEEEEEeCCCCCCCcceeeeeeec--cccceec
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-------GDDAIRIFKENPEAGDSDMVSFDLVHT--EHRAHNQ 343 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i~v~~~~~~~~~~~~~~~~~~~~--~~~~h~~ 343 (377)
....|+++.++.+| +..+..+.++|+++.|++++ .+++|.+|+..+.+.....+. +.. ....|..
T Consensus 406 --~~~~~~~v~~l~~~-g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~---v~~~~~~~~~~~ 479 (543)
T 1nir_A 406 --PQYAWKKVAELQGQ-GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLP---IAEWADLGEGAK 479 (543)
T ss_dssp --TTTBTSEEEEEECS-CSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEEC---HHHHHCCCSSCC
T ss_pred --chhcCeEEEEEEcC-CCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEee---chhhcccCCCCC
Confidence 12335678888875 34678899999999999987 277999999876552211110 000 0123467
Q ss_pred ceeEEEecCCCCceEEEe----eCCCcEEEEecccCC
Q psy18091 344 DVNCVAWNPVVPGMLASC----SDDGDVKLWQIKLEN 376 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~----s~Dg~i~iWd~~~~~ 376 (377)
.+..++|+|.+..+++|. +.|+.|.|||..+.+
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 899999999655555443 358999999988754
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=5.4e-23 Score=205.03 Aligned_cols=288 Identities=11% Similarity=0.099 Sum_probs=188.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC---ceeEEEECCCCCEEEEEECC---------
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR---TIRETAWSPCGNFIASASFD--------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~d--------- 118 (377)
..+.+++|+|||+++++ +.|++|++||..+... .. ...+|.. .|.+++|+|+|++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~----~~-~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTS----TV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC----EE-EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcE----EE-EeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 34678899999998877 7899999999875321 11 2234443 48999999999999999875
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccc----------
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQD---------- 188 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~---------- 188 (377)
+.+.+||+.+++........+|...+..++|+|||++++.++. +.|++||+.+..... ....+...
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~---~~~~~~~~~~~~g~~~~v 166 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIR---VVSTGKEGVIYNGLSDWL 166 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEE---EECCCBTTTEEEEECCHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEE---EecCCCCCceECccccee
Confidence 7788999998875333333445556889999999999999876 789999998764332 22222222
Q ss_pred --------eeEEEEeeCCcEEEEeeCCC----------------------------------cEEEEecCcccccceeee
Q psy18091 189 --------VKKVRFHPFDNILASASYDD----------------------------------TVKLFKEDKAEADWINFA 226 (377)
Q Consensus 189 --------v~~~~~~~~~~~l~s~s~dg----------------------------------~i~~~~~~~~~~~~~~~~ 226 (377)
+..+.|+|+|+.|++++.++ .|++||+..... ..
T Consensus 167 ~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~ 242 (723)
T 1xfd_A 167 YEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DL 242 (723)
T ss_dssp HHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CE
T ss_pred EEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce----eE
Confidence 37899999999999887553 688888765442 11
Q ss_pred ecc------cCCcceEEEEEcCCCCeEEEeeC----CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce---
Q psy18091 227 TLK------SHTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI--- 293 (377)
Q Consensus 227 ~~~------~h~~~v~~~~~~~~~~~l~s~s~----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--- 293 (377)
.+. .+...+.+++|+|+|+++++.+. +..|++||.... .+...+..++...+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g---------------~~~~~~~~~~~~~~~~~ 307 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG---------------VCTKKHEDESEAWLHRQ 307 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC---------------CEEEEEEEECSSCCCCC
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC---------------cceEEEEeccCCEEecc
Confidence 222 24678999999999998876653 357888885321 11122222222233
Q ss_pred -eEEEecccCCEEEE--EeCCC----cEEEEEeC-CCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEE-EeeC
Q psy18091 294 -YDISWCHLTDLIAT--ACGDD----AIRIFKEN-PEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLA-SCSD 363 (377)
Q Consensus 294 -~~~~~~~~~~~l~~--~~~d~----~i~v~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~la-S~s~ 363 (377)
..+.|+|+++.|+. +..++ ..++|... ...+... . ......++ ..+. .++|+|+ +..|+ ++..
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-~----~~~l~~~~-~~~~~~~~~spd-g~~l~~~~~~ 380 (723)
T 1xfd_A 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND-N----IQSITSGD-WDVTKILAYDEK-GNKIYFLSTE 380 (723)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC-C----CCBSCCSS-SCEEEEEEEETT-TTEEEEEESS
T ss_pred CCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc-c----eeEeecCC-eEEEeeeEEcCC-CCEEEEEEcC
Confidence 37899999986664 44566 55555543 1111100 0 00111122 2344 4799996 44555 4555
Q ss_pred C--CcEEEEeccc
Q psy18091 364 D--GDVKLWQIKL 374 (377)
Q Consensus 364 D--g~i~iWd~~~ 374 (377)
| +.++||++..
T Consensus 381 ~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 381 DLPRRRQLYSANT 393 (723)
T ss_dssp SCTTCCEEEEECS
T ss_pred CCCcceEEEEEeC
Confidence 5 8999999864
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=9.6e-22 Score=189.13 Aligned_cols=285 Identities=12% Similarity=0.118 Sum_probs=196.5
Q ss_pred ECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeC--CCCceEEeE
Q psy18091 58 WNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDK--RSGQFECNA 135 (377)
Q Consensus 58 ~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~--~~~~~~~~~ 135 (377)
++|++.++++++.|++|++||..+.. ....+..++. +..++|+|+|++|++++.|+.|++||+ .+++. ..
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~--~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK--VA 216 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCC----EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE--EE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCce----EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE--EE
Confidence 88999999999999999999987421 1122223443 889999999999999999999999999 66653 34
Q ss_pred EecCccCCEEEEEEcC----CCCEEEEEE-CCCcEEEEEcCCCCceeEEEEee-------cccc-ceeEEEEeeCCc-EE
Q psy18091 136 TLEGHENEVKSVTWSK----NGQFLATCS-RDKSVWVWEVGEEDEYECAAVIN-------AHIQ-DVKKVRFHPFDN-IL 201 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~----~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~-------~~~~-~v~~~~~~~~~~-~l 201 (377)
.+. +...+..++|+| +|+++++++ .+++|.+||..+........... .|.. .+..+.++|++. ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 444 345679999999 999999888 48999999988765433222111 0222 678899999764 56
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEE
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWK 280 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~ 280 (377)
++...++.|.+||....... ....+ .+...+.+++|+|+|++|++ +..|++|.+||.... +
T Consensus 296 vs~~~~g~i~vvd~~~~~~l--~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg---------------~ 357 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNL--TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR---------------R 357 (543)
T ss_dssp EEETTTTEEEEEECTTSSSC--EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT---------------E
T ss_pred EEECCCCeEEEEEecCCCcc--eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC---------------e
Confidence 77788999999998754321 11122 35566788999999997665 456899999996422 2
Q ss_pred EEEeecC----CCCcceeEEEeccc-CCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 281 CVCTLSG----HHGRTIYDISWCHL-TDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 281 ~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+...+.. |.+..+. + ++|+ +.+++++. +|++|.+|+..+.... ...++++.+ ..+|...+..++|||+
T Consensus 358 l~~~i~~g~~ph~g~g~~-~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--~~~~~~v~~-l~~~g~~~~~v~~~pd- 431 (543)
T 1nir_A 358 LSALVDVGKTPHPGRGAN-F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVAE-LQGQGGGSLFIKTHPK- 431 (543)
T ss_dssp EEEEEECSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEE-EECSCSCCCCEECCTT-
T ss_pred EEEeeccCCCCCCCCCcc-c-CCCCCccEEEeccCCCceEEEEEeCCCCCc--hhcCeEEEE-EEcCCCCceEEEcCCC-
Confidence 3333332 3222222 2 3565 55667765 6899999998763211 011223333 2356677888999995
Q ss_pred CceEEEee-------CCCcEEEEecccC
Q psy18091 355 PGMLASCS-------DDGDVKLWQIKLE 375 (377)
Q Consensus 355 ~~~laS~s-------~Dg~i~iWd~~~~ 375 (377)
+..|.+++ .|++|.+||+...
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCcEEEecCCCCCcccCceEEEEECCCC
Confidence 66777776 3789999999864
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=5.6e-21 Score=172.52 Aligned_cols=259 Identities=12% Similarity=0.123 Sum_probs=175.9
Q ss_pred cccCCEEEEEECCCCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEe
Q psy18091 48 GHQGRVWNVSWNPQGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWD 125 (377)
Q Consensus 48 ~h~~~V~~v~~~~~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd 125 (377)
.|.+.+.+++|+|+|++|++++.+ +.|++|+++...........+. .+ ..+..++|+|++++|++++. ++.|.+||
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LP-GSLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CS-SCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-cC-CCCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 366788999999999998888887 9999999862212221111111 22 37889999999998877665 88899999
Q ss_pred CCCCc-eEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEE--Eeec-cccceeEEEEeeCCcE
Q psy18091 126 KRSGQ-FECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAA--VINA-HIQDVKKVRFHPFDNI 200 (377)
Q Consensus 126 ~~~~~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~ 200 (377)
+..+. ......+.. ...+.+++|+|+++++++++ .++.|++||+.......... .... ....+..+.|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 85332 122333333 34588999999999888887 89999999998733332222 2222 2346778999999986
Q ss_pred EEEe-eCCCcEEEEecCcccccceeeee---cc-c--CCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCC
Q psy18091 201 LASA-SYDDTVKLFKEDKAEADWINFAT---LK-S--HTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 201 l~s~-s~dg~i~~~~~~~~~~~~~~~~~---~~-~--h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~ 272 (377)
++++ ..++.+.+|++......+..... +. . ....+..++|+|+|++|+ +++.|+.|++|+.....
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~------- 264 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG------- 264 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS-------
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC-------
Confidence 6554 58899999998642222211111 11 1 134567899999998776 55579999999974211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCC
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~ 322 (377)
........+..+ . .+..++|+|+++.|++++ .++.+.+|+....
T Consensus 265 ----~~~~~~~~~~~~-~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 265 ----SVLSKEGFQPTE-T-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp ----CCEEEEEEEECS-S-SCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred ----CceEEeeeecCC-C-ccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 112233334332 2 378899999999888887 6899999976543
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=9.2e-21 Score=172.08 Aligned_cols=282 Identities=10% Similarity=0.076 Sum_probs=182.6
Q ss_pred CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEeCCCCceEEeEEecCccCCEEE
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWDKRSGQFECNATLEGHENEVKS 146 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 146 (377)
.++.|.+|+++........ +....+......++|+|+|+ |++++. ++.|.+|++.++.......+..+...+..
T Consensus 14 ~~~~i~v~~~d~~tg~~~~--~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTN--DGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp SCCEEEEEEEETTTTEEEE--EEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCCCEEEEEEcCCCCeEEE--eeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 4567888887642222222 11223456677899999999 555554 68999999988776555555556778899
Q ss_pred EEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeec---------cccceeEEEEeeCCcEEEEeeCCCcEEEEecC
Q psy18091 147 VTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINA---------HIQDVKKVRFHPFDNILASASYDDTVKLFKED 216 (377)
Q Consensus 147 l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~ 216 (377)
++|+|+|+++++++ .++.+.+|++.............. +...+..++|+|+++++++...++.|.+|++.
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence 99999999988888 779999999965433333222221 11247789999999977777778999999987
Q ss_pred cccccceeeeeccc-CCcceEEEEEcCCCCeEEE-eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-----
Q psy18091 217 KAEADWINFATLKS-HTSTVWSLAFDRIGSRLAT-CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH----- 289 (377)
Q Consensus 217 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s-~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 289 (377)
... .......+.. ....+..++|+|+|+++++ +..++.|.+|+..... ........+....
T Consensus 171 ~~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-----------g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 171 DAG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-----------GAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-----------TEEEEEEEEESSCTTCCS
T ss_pred CCC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-----------CceEEeeeeeecCCCCCC
Confidence 221 1111222222 2335778999999996554 5678999999875311 0111122221111
Q ss_pred CcceeEEEecccCCEE-EEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEee-CCCcE
Q psy18091 290 GRTIYDISWCHLTDLI-ATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCS-DDGDV 367 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l-~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i 367 (377)
...+..++|+|++++| ++...++.+.+|+..... . .. .+.. ...|...+..++|+|+ +..|++++ .++.|
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~--~~---~~~~-~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v 310 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-H--LT---LIQQ-ISTEGDFPRDFDLDPT-EAFVVVVNQNTDNA 310 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-C--EE---EEEE-EECSSSCCCEEEECTT-SSEEEEEETTTTEE
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-c--EE---EeEE-EecCCCCcCeEEECCC-CCEEEEEEcCCCcE
Confidence 1357889999999976 555678999999875321 1 11 1111 1233456889999995 55555554 56999
Q ss_pred EEEeccc
Q psy18091 368 KLWQIKL 374 (377)
Q Consensus 368 ~iWd~~~ 374 (377)
.+|++..
T Consensus 311 ~v~~~d~ 317 (347)
T 3hfq_A 311 TLYARDL 317 (347)
T ss_dssp EEEEECT
T ss_pred EEEEEeC
Confidence 9996653
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=4.1e-21 Score=172.99 Aligned_cols=291 Identities=12% Similarity=0.077 Sum_probs=185.3
Q ss_pred EEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcEEEEeCCCCceEE
Q psy18091 56 VSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFEC 133 (377)
Q Consensus 56 v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~ 133 (377)
..|.+++.+ +++++.+++|++||.++. ... .... .+...+ .++|+|+++++++++. ++.|.+||..+++..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~~--~~~~-~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~- 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTL--EIL--NQIT-LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK- 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTC--CEE--EEEE-CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCccc--cee--eeEE-ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-
Confidence 345665554 788889999999998742 221 1122 234455 8999999997776666 889999999888752
Q ss_pred eEEecCccCCEEEEEEcCCCCEEEEEECCC---cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCc
Q psy18091 134 NATLEGHENEVKSVTWSKNGQFLATCSRDK---SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDT 209 (377)
Q Consensus 134 ~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg---~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~ 209 (377)
...+..+..+..+++|+|++++++++..++ .|++||+.+.... ..+.. ......++|+|+++++ ++...++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~---~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI---STIPI-PYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE---EEEEC-CTTEEEEEECTTSSCEEEEEETTTT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE---EEEEC-CCCccceEECCCCCEEEEEecCCCc
Confidence 233444556655599999999998655553 8999999876432 22332 3446889999999755 45566688
Q ss_pred -EEEEecCcccccceee-eecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 210 -VKLFKEDKAEADWINF-ATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 210 -i~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+.+|++..... .... ............++|+|+|+++ +++..++.|++||...... ......+.
T Consensus 152 ~i~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~------------~~~~~~~~ 218 (331)
T 3u4y_A 152 TVRRFKIDADGV-LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN------------ITLLNAVG 218 (331)
T ss_dssp EEEEEEECTTCC-EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS------------CEEEEEEE
T ss_pred eEEEEEECCCCc-EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc------------cceeeecc
Confidence 99999864321 1111 1112334557899999999965 4555789999999643211 01122233
Q ss_pred CCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeec--cccceecceeEEEecCCCCceEEEeeC
Q psy18091 287 GHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHT--EHRAHNQDVNCVAWNPVVPGMLASCSD 363 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~laS~s~ 363 (377)
. +..+..++|+|+++.+++++ .++.+.+|+....+... +. ..... .........+.++|+|++..++++++.
T Consensus 219 ~--~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 293 (331)
T 3u4y_A 219 T--NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-VK--SFGHGLLIDPRPLFGANQMALNKTETKLFISANI 293 (331)
T ss_dssp C--SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE-EE--EEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT
T ss_pred C--CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee-ec--ccccccccCCCCcccccceEECCCCCEEEEecCC
Confidence 2 34677899999999666554 57889999865432100 00 00000 001112223669999965555567777
Q ss_pred CCcEEEEecccC
Q psy18091 364 DGDVKLWQIKLE 375 (377)
Q Consensus 364 Dg~i~iWd~~~~ 375 (377)
++.|++||+...
T Consensus 294 ~~~v~v~d~~~~ 305 (331)
T 3u4y_A 294 SRELKVFTISGK 305 (331)
T ss_dssp TTEEEEEETTSC
T ss_pred CCcEEEEEecCC
Confidence 889999999754
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=7.9e-22 Score=173.88 Aligned_cols=259 Identities=11% Similarity=0.084 Sum_probs=178.7
Q ss_pred EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC-CceEEeEEecCc-cCCE
Q psy18091 67 SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-GQFECNATLEGH-ENEV 144 (377)
Q Consensus 67 s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~~h-~~~v 144 (377)
+++.|++|++||.... .. . ....|...|.+++|+|++++|++++ ++.|.+||+.+ ++.. .....| ...+
T Consensus 17 ~~~~~~~i~~~d~~~~--~~--~--~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~--~~~~~~~~~~~ 87 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTR--KM--R--VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE--KVDTGFATICN 87 (297)
T ss_dssp -CCCCEEEEEEETTTT--EE--E--EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE--ECCCTTCCCBC
T ss_pred CCCcceeEEEEeCCCC--ce--e--eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce--Eeccccccccc
Confidence 4678999999998631 11 1 1235788999999999999999987 78999999988 7643 223344 4678
Q ss_pred EEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEE-EeeCCCcEEEEecCccccc
Q psy18091 145 KSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILA-SASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 145 ~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~dg~i~~~~~~~~~~~ 221 (377)
.+++|+|+++++++++ .++...+|.+...... ...+.. ...+..++|+|+++.++ +++.++.+++|+.......
T Consensus 88 ~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~--~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT--PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC--CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred cceEECCCCCEEEEEEeCCCCcceEEEEECCCCc--eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 8999999999999998 3345555554322111 112222 23488889999999877 7888999999986433221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH 300 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 300 (377)
...+..|...+.+++|+|++++|+.++ .|+.+++|+....... ...+..+ ...+..+.|+|
T Consensus 165 ---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~-~~~~~~~~~s~ 226 (297)
T 2ojh_A 165 ---ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS--------------VERITDS-AYGDWFPHPSP 226 (297)
T ss_dssp ---EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--------------EEECCCC-SEEEEEEEECT
T ss_pred ---ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC--------------cEEEecC-CcccCCeEECC
Confidence 234566778899999999999888666 5999999987532211 1223332 35788899999
Q ss_pred cCCEEEEEeCC-----------CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC
Q psy18091 301 LTDLIATACGD-----------DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD 364 (377)
Q Consensus 301 ~~~~l~~~~~d-----------~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D 364 (377)
+++.|+.++.+ +.+.+|+....+. .. +. ...+|...+.+++|+|+ +..|++++.|
T Consensus 227 dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~---~~-~~~~~~~~~~~~~~spd-g~~l~~~~~~ 292 (297)
T 2ojh_A 227 SGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV----ET---LF-DLFGGQGTMNSPNWSPD-GDEFAYVRYF 292 (297)
T ss_dssp TSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC----EE---EE-EEEESTTTSCSCCBCTT-SSEEEEEEEC
T ss_pred CCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc----ee---ee-ccCCCCcccccceECCC-CCEEEEEEec
Confidence 99998888766 4588887654321 00 11 12356778999999995 5566666554
No 138
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.2e-20 Score=176.68 Aligned_cols=211 Identities=17% Similarity=0.131 Sum_probs=153.7
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCc-------cc---ceeeeeccCcCceeEEEECCCCCEEE----EE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNK-------FT---AKAILSDGHQRTIRETAWSPCGNFIA----SA 115 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~-------~~---~~~~~~~~h~~~V~~~~~~~~~~~l~----s~ 115 (377)
...++.+++++++.++++++.|+ +++|+....... .. ........+...|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 45689999999999999999998 899865421000 00 00001123566799999999999999 78
Q ss_pred ECCCcEEEEeCCCC-----c----eEEeEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCceeEEEEeecc
Q psy18091 116 SFDATTAVWDKRSG-----Q----FECNATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 116 s~d~~i~iwd~~~~-----~----~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
+.|+.|++||+.++ + +.....+.+|...|.+++|+|+ +++|++++.||+|++||++... .......|
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~---~~~~~~~~ 191 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV---KVCATLPS 191 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE---EEEEEECG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc---ceeeccCC
Confidence 88999999997543 1 1123456779999999999997 7899999999999999998763 22334568
Q ss_pred ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeee-ec-ccCCcceEEEEEcCCCCeEEEe-eCCC------cE
Q psy18091 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFA-TL-KSHTSTVWSLAFDRIGSRLATC-SDDA------TV 256 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~-~~-~~h~~~v~~~~~~~~~~~l~s~-s~D~------~i 256 (377)
...+.+++|+|++++|++|+.||.|++||.+.......... .. ..|...|.+++|++++.++++. +.|| .+
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 88999999999999999999999999999872211100000 00 1244589999999988777543 3443 38
Q ss_pred EEEeeeCC
Q psy18091 257 KIWKEYKP 264 (377)
Q Consensus 257 ~iw~~~~~ 264 (377)
++|++.+.
T Consensus 272 ~i~~l~~~ 279 (434)
T 2oit_A 272 VMALLPKK 279 (434)
T ss_dssp EEEECCCT
T ss_pred EEEEeccC
Confidence 89997654
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.89 E-value=5.2e-21 Score=190.27 Aligned_cols=285 Identities=9% Similarity=0.062 Sum_probs=189.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC--
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS-- 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-- 128 (377)
..|.+++|+|| ..++.+ .|++|++||..+. . ... ...+...+.+++|+|+|++|+.+ .|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~--~--~~~--l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR--K--VTY--LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT--E--EEE--EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCC--c--eEE--ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccc
Confidence 56999999999 555544 3599999998631 1 111 22456678889999999999985 689999999987
Q ss_pred ---CceEEeEEecCccCC--------------EEEEEEcCCCCEEEEEE-------------------------------
Q psy18091 129 ---GQFECNATLEGHENE--------------VKSVTWSKNGQFLATCS------------------------------- 160 (377)
Q Consensus 129 ---~~~~~~~~~~~h~~~--------------v~~l~~~~~~~~l~s~~------------------------------- 160 (377)
++.... ...+... +.++.|+|||++|++++
T Consensus 153 ~~~g~~~~~--~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 153 EGMSRAIAV--TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp SCCCCCEES--CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccCCCcEEe--ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 754321 2222222 47899999999999987
Q ss_pred --CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCC-
Q psy18091 161 --RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHT- 232 (377)
Q Consensus 161 --~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~- 232 (377)
.+..|++||+.+..... ......|...+..+.|+|+++.+++++.++ .|.+||....... ..+.. ..+.
T Consensus 231 ~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-~~~~~-~~~~~ 307 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVY-LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-RTLFV-ETDKH 307 (706)
T ss_dssp CCCEEEEEEEETTTTEEEE-CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-EEEEE-EECSS
T ss_pred CCCeeEEEEEECCCCceEe-eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-eEEEE-ccCCC
Confidence 45779999998764221 111124556788999999999999888775 8999998765211 11111 1122
Q ss_pred --cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeE-EEecccCCEEEE
Q psy18091 233 --STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIAT 307 (377)
Q Consensus 233 --~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~ 307 (377)
..+.+++|+| +|+++++++.|+.+++|.....+. ....+..+ ...+.. +.|+|+++.|+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~--------------~~~~l~~~-~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR--------------LIRQVTKG-EWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC--------------EEEECCCS-SSCEEEEEEECTTSSEEEE
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC--------------EEEecCCC-CeEEEeeeEEcCCCCEEEE
Confidence 1245789999 999999999999999998642111 12334443 334655 799999987766
Q ss_pred EeCCC---cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEE-eeCC---CcEEEEecccC
Q psy18091 308 ACGDD---AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLAS-CSDD---GDVKLWQIKLE 375 (377)
Q Consensus 308 ~~~d~---~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS-~s~D---g~i~iWd~~~~ 375 (377)
++.+. ..++|......+.. . . ..|...+.+++|+|++ ..|+. ++.+ +.|++||+...
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~~--~------~--l~~~~~~~~~~~spdg-~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGKT--K------D--LTPESGMHRTQLSPDG-SAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCCC--E------E--SCCSSSEEEEEECTTS-SEEEEEEECSSCSCEEEEEESSSC
T ss_pred EecCCCCceEEEEEEEcCCCCc--e------e--ccCCCceEEEEECCCC-CEEEEEecCCCCCcEEEEEECCCC
Confidence 65543 35666554322111 1 0 1245678999999964 45554 4444 56999998654
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=5e-21 Score=168.70 Aligned_cols=240 Identities=11% Similarity=0.092 Sum_probs=171.8
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeeccc-CCCcccceeeeeccCcCceeEEEECCCCCEEEEEE--CCCcE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKES-FGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS--FDATT 121 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~-~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s--~d~~i 121 (377)
.+..|.+.|.+++|+|+|++|++++ ++.|++||... .. ...+....+...+.+++|+|++++|++++ .++..
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 4667889999999999999999987 78999999874 21 11122222346788999999999999998 33456
Q ss_pred EEEe--CCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 122 AVWD--KRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 122 ~iwd--~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+||. ..+++. ..+..+ ..+..++|+|++++++ +++.++.+++|++...... ...+..+...+..+.|+|++
T Consensus 111 ~l~~~~~~~~~~---~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 111 AIYLLPSTGGTP---RLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV--ETRLTHGEGRNDGPDYSPDG 184 (297)
T ss_dssp EEEEEETTCCCC---EECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC--EEECCCSSSCEEEEEECTTS
T ss_pred eEEEEECCCCce---EEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc--ceEcccCCCccccceECCCC
Confidence 6665 455542 233333 3589999999999876 7888999999997543221 22345566789999999999
Q ss_pred cEEEEee-CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC-----------CcEEEEeeeCCCC
Q psy18091 199 NILASAS-YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD-----------ATVKIWKEYKPGN 266 (377)
Q Consensus 199 ~~l~s~s-~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----------~~i~iw~~~~~~~ 266 (377)
+.++.++ .++.+++|++..... ....+..|...+.+++|+|+|++|++++.+ +.|.+||.....
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~- 260 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN- 260 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-
T ss_pred CEEEEEecCCCCccEEEECCCCC---CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-
Confidence 9887766 589999998753222 134556677889999999999999988776 468899863221
Q ss_pred CCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC
Q psy18091 267 SAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD 312 (377)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 312 (377)
...+..+.+| ...+..+.|+|+++.|++++.+.
T Consensus 261 ------------~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 261 ------------VETLFDLFGG-QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ------------CEEEEEEEES-TTTSCSCCBCTTSSEEEEEEECC
T ss_pred ------------ceeeeccCCC-CcccccceECCCCCEEEEEEecc
Confidence 1122233333 34788899999999888877653
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=9.8e-20 Score=165.29 Aligned_cols=260 Identities=10% Similarity=0.134 Sum_probs=173.7
Q ss_pred ccccCCEEEEEECCCCCEEEEEeC---CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGE---DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~ 122 (377)
..+......++|+|||+ |++++. ++.|++|++.. ....... ....+...+..++|+|+|++|++++ .++.+.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~--g~~~~~~-~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG--QTAHKLN-TVVAPGTPPAYVAVDEARQLVYSANYHKGTAE 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET--TEEEEEE-EEEEESCCCSEEEEETTTTEEEEEETTTTEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC--CcEEEee-eeecCCCCCEEEEECCCCCEEEEEeCCCCEEE
Confidence 34556778899999999 555544 68999999853 1211111 1123566788999999999988888 679999
Q ss_pred EEeCC-CCceEEeEEecC---------ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-ccceeE
Q psy18091 123 VWDKR-SGQFECNATLEG---------HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH-IQDVKK 191 (377)
Q Consensus 123 iwd~~-~~~~~~~~~~~~---------h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-~~~v~~ 191 (377)
+|++. .+.......+.. +...+.+++|+|+|+.+++...++.|++|++.....+........+ ......
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99984 444443333321 1234889999999996666667889999999843333322222222 235678
Q ss_pred EEEeeCCcEEEE-eeCCCcEEEEecCcccccceeeeecccCC------cceEEEEEcCCCCeE-EEeeCCCcEEEEeeeC
Q psy18091 192 VRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHT------STVWSLAFDRIGSRL-ATCSDDATVKIWKEYK 263 (377)
Q Consensus 192 ~~~~~~~~~l~s-~s~dg~i~~~~~~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~ 263 (377)
++|+|+++++++ +..++.+.+|++......+.....+.... ..+..++|+|+|++| +++..++.|.+|++..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 999999995554 56788999998764222222222222221 458889999999977 5667799999999742
Q ss_pred CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-CCcEEEEEeCCCC
Q psy18091 264 PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-DDAIRIFKENPEA 323 (377)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~~~ 323 (377)
.+ .......+..+ +..+..++|+|+++.|++++. ++.+.+|......
T Consensus 272 ~g------------~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~t 319 (347)
T 3hfq_A 272 DG------------HLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTS 319 (347)
T ss_dssp GG------------CEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CC------------cEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCC
Confidence 11 12233344332 346789999999998888775 4899999775443
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=2.3e-20 Score=193.32 Aligned_cols=292 Identities=10% Similarity=0.045 Sum_probs=206.2
Q ss_pred ccCCEEEEEEC-CCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-ceeEEEECCCCCEEEEEECCCcEE-EEe
Q psy18091 49 HQGRVWNVSWN-PQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFIASASFDATTA-VWD 125 (377)
Q Consensus 49 h~~~V~~v~~~-~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~~~~~~l~s~s~d~~i~-iwd 125 (377)
|.+.+.+++|+ |||++|++++ ++.|++|+.... . .. ....|.. .+..++|+ +|+.|+.++.++.+. +||
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~--~--~~--~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d 365 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT--Y--VL--KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYD 365 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS--B--EE--ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC--c--eE--EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEE
Confidence 44578999999 9999999888 789999987631 1 11 1235666 78999999 999999999888888 889
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
..+++.. .+.+|...+..++|+|||+++++++.++.|++||+.+... ......|...+..++|+|+++++++++
T Consensus 366 ~~~~~~~---~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~---~~~~~~~~~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 366 YRTGKAE---KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP---TVIERSREAMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp TTTCCEE---ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred CCCCCce---EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce---EEeccCCCCCccceEECCCCCeEEEEe
Confidence 8877643 2337888999999999999999999999999999987643 233456778889999999999998887
Q ss_pred CCC----------cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC-------
Q psy18091 206 YDD----------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA------- 268 (377)
Q Consensus 206 ~dg----------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~------- 268 (377)
.++ .|++||+.... ...+..|...+.+++|+|+|++|+.++.++..++|+........
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~-----~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRK-----IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF 514 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTE-----EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEE
T ss_pred cCccccccCCCCCeEEEEECCCCc-----EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeE
Confidence 654 89999987543 34566788888999999999999999998888888643211000
Q ss_pred ------CCCC---------------CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEE-----------EeCCC--cE
Q psy18091 269 ------GIPT---------------PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIAT-----------ACGDD--AI 314 (377)
Q Consensus 269 ------~~~~---------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----------~~~d~--~i 314 (377)
.... .+..........+..+ ...+..+.++|++.++++ ++.++ .+
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~-~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l 593 (1045)
T 1k32_A 515 VIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD-PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVL 593 (1045)
T ss_dssp EEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC-CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEE
T ss_pred EEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC-CCChhheEEcCCCeEEEEecccCcccccccccCCCceE
Confidence 0000 0000000001122222 346788999998877775 12333 44
Q ss_pred EEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 315 RIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 315 ~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+|+....+ . . .+ ...+.+++|+| ++..|++++.| .|++||+...+
T Consensus 594 ~~~d~~~~~--~--~---~l-------~~~v~~~~~S~-DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 594 LKYDVKTRK--V--T---EV-------KNNLTDLRLSA-DRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEETTTCC--E--E---EE-------EEEEEEEEECT-TSCEEEEEETT-SCEEEEESSCT
T ss_pred EEEECCCCc--E--E---Ee-------ecCcceEEECC-CCCEEEEEcCC-cEEEEeCccCc
Confidence 445443322 0 0 01 14688999999 56778888777 79999997653
No 143
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=1.3e-18 Score=158.72 Aligned_cols=280 Identities=16% Similarity=0.129 Sum_probs=178.6
Q ss_pred eCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC----CcEEEEeCCC--CceEEeEEecCccC
Q psy18091 69 GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----ATTAVWDKRS--GQFECNATLEGHEN 142 (377)
Q Consensus 69 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d----~~i~iwd~~~--~~~~~~~~~~~h~~ 142 (377)
+.++.|.+|.++........... . +......++|+|+|++|++++.+ +.+.+|++.. +++........+..
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~--~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSD--A-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEE--E-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCCEEEeec--c-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 35678999987642222222221 2 55667789999999999999886 7999998754 66655555555566
Q ss_pred CEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEE-EEe--ec--------cccceeEEEEeeCCcEEEEe-eCCCc
Q psy18091 143 EVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECA-AVI--NA--------HIQDVKKVRFHPFDNILASA-SYDDT 209 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~-~~~--~~--------~~~~v~~~~~~~~~~~l~s~-s~dg~ 209 (377)
....+++ +++++++++ .++.|.+|++......... ... .. +...+..++|+|++++++++ ..++.
T Consensus 101 ~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 101 DPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp CEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 7788888 788777776 5789999999754332111 111 11 12235779999999866554 45889
Q ss_pred EEEEecCcccc----c-cee----eeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 210 VKLFKEDKAEA----D-WIN----FATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 210 i~~~~~~~~~~----~-~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
+.+|++..... . +.. ......+...+..++|+|+|+++++++ .++.|.+|+.... ..
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g-------------~~ 245 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG-------------ML 245 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT-------------EE
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC-------------ce
Confidence 99998764332 1 111 011223445678999999999877666 6899999997521 01
Q ss_pred EEEEeecC--CCCcceeEEEecccCCEEEEEeC--CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCC
Q psy18091 280 KCVCTLSG--HHGRTIYDISWCHLTDLIATACG--DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVP 355 (377)
Q Consensus 280 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~--d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 355 (377)
.....+.. .+......+.|+|++++|+++.. ++.+.+|+.....+... .+.... . ...+.+++|+|+ +
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~-----~~~~~~-~-g~~~~~~~~spd-g 317 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT-----KVGYQL-T-GIHPRNFIITPN-G 317 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE-----EEEEEE-C-SSCCCEEEECTT-S
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE-----EeeEec-C-CCCCceEEECCC-C
Confidence 11111111 11234578999999998876665 48999999864332211 111111 1 246789999995 5
Q ss_pred ceEEEee-CCCcEEEEeccc
Q psy18091 356 GMLASCS-DDGDVKLWQIKL 374 (377)
Q Consensus 356 ~~laS~s-~Dg~i~iWd~~~ 374 (377)
.+|+.++ .++.|.+|++..
T Consensus 318 ~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 318 KYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CEEEEEETTTTEEEEEEECT
T ss_pred CEEEEEECCCCCEEEEEEEC
Confidence 5555554 789999987653
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=7.2e-20 Score=182.96 Aligned_cols=283 Identities=12% Similarity=0.106 Sum_probs=190.5
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
.|.+++|+|||++|++++. ++|++||...... ..... ...|...+..++|+|+|++|+.++ ++.|.+||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~-~~~~~--l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGK-AAVRQ--LTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCST-TSCCB--CCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCc-ceEEE--cccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 3789999999999999887 9999999874210 01111 235677899999999999999887 56899999988764
Q ss_pred EEeEEecCccCC----------------EEEEEEcCCCCEEEEEECCC--------------------------------
Q psy18091 132 ECNATLEGHENE----------------VKSVTWSKNGQFLATCSRDK-------------------------------- 163 (377)
Q Consensus 132 ~~~~~~~~h~~~----------------v~~l~~~~~~~~l~s~~~dg-------------------------------- 163 (377)
... ...+... +..++|+|||++|++++.|+
T Consensus 185 ~~~--~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 262 (741)
T 2ecf_A 185 MQL--TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQ 262 (741)
T ss_dssp EEC--CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCE
T ss_pred EEe--ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCe
Confidence 322 2222222 47799999999999987765
Q ss_pred -cEEEEEcCC-CCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-----CCcEEEEecCcccccceeeeecccCCc---
Q psy18091 164 -SVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASY-----DDTVKLFKEDKAEADWINFATLKSHTS--- 233 (377)
Q Consensus 164 -~v~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-----dg~i~~~~~~~~~~~~~~~~~~~~h~~--- 233 (377)
.|++||+.+ ..... ......|...+..++| |+++.|++++. +..|.+||....... ..+..+..
T Consensus 263 ~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~~~~ 336 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQW-IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR----VLAHETSPTWV 336 (741)
T ss_dssp EEEEEECSSTTCCCEE-ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE----EEEEEECSSCC
T ss_pred eEEEEEECCCCCceEE-ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE----EEEEcCCCCcC
Confidence 788999877 54321 1111146677899999 99999987754 567899998765432 11222221
Q ss_pred -ceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEE-EecccCCEEE-EEeC
Q psy18091 234 -TVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIA-TACG 310 (377)
Q Consensus 234 -~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~-~~~~ 310 (377)
.+.+++|+|+|+++++++.|+.+++|.....+. ...+..+ ...+..+ .|+|+++.++ +++.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---------------~~~l~~~-~~~v~~~~~~s~dg~~l~~~~~~ 400 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---------------AAALTHG-NWSVDELLAVDEKAGLAYFRAGI 400 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---------------EEESCCS-SSCEEEEEEEETTTTEEEEEECS
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---------------eeeeeec-ceEEEeEeEEeCCCCEEEEEEeC
Confidence 345789999999989999999999997532111 2233333 3456666 5999998665 4555
Q ss_pred CC--cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC---CcEEEEecc
Q psy18091 311 DD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIK 373 (377)
Q Consensus 311 d~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D---g~i~iWd~~ 373 (377)
++ .+++|......... . .. . ....+..++|+|++..++++++.. ..+.+|+..
T Consensus 401 ~~~~~~~l~~~~~~g~~~--~------~l-~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 401 ESARESQIYAVPLQGGQP--Q------RL-S-KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp SCTTCBEEEEEETTCCCC--E------EC-C-CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CCCceEEEEEEEcCCCCe--e------ec-c-cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 55 89999875422110 1 11 1 134678999999654444444443 468888764
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=9.1e-19 Score=158.78 Aligned_cols=276 Identities=7% Similarity=0.068 Sum_probs=183.5
Q ss_pred cCCEEEEEECCCCCEEEEEeC-------CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-------DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATT 121 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-------D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i 121 (377)
...+..++|+|+|+++++++. +++|.+||..+. ... ..+ .....+..++|+|++++++ +...++.|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~--~~~--~~~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL--EVT--QAI--HNDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC--CEE--EEE--EESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC--eEE--EEE--ecCCCcceEEECCCCCEEEEEecCCCEE
Confidence 456889999999998888774 568999998742 111 111 1234467889999999655 44557999
Q ss_pred EEEeCCCCceEEeEEecCccC-------CEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEE
Q psy18091 122 AVWDKRSGQFECNATLEGHEN-------EVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKV 192 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~-------~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~ 192 (377)
.+||..+++............ .+.+++|+|+++++++++ .++.|.+||..+... ...+..+...+..+
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL---KTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE---EEEECCCCTTCCCC
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce---EEEecCCCCccceE
Confidence 999999887543332211111 278999999999877776 478899999987643 23344344457788
Q ss_pred EEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCC
Q psy18091 193 RFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 193 ~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~ 271 (377)
.|+|+++.+++++.++.+.+||...............++...+..++|+|++++++.++ .++.|.+||.....
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~------ 264 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN------ 264 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc------
Confidence 99999999999999999999998765432111111123555788899999999766555 45999999863221
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEe
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW 350 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 350 (377)
....+.... ...+.|+|+++.+++++ .++.+.+|+....+ ++.... ....+.+++|
T Consensus 265 ---------~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---------~~~~~~--~~~~~~~~~~ 321 (353)
T 3vgz_A 265 ---------ILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---------VVKTFD--TPTHPNSLAL 321 (353)
T ss_dssp ---------EEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE---------EEEEEE--CCSEEEEEEE
T ss_pred ---------EEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe---------EEEEEe--cCCCCCeEEE
Confidence 112222211 24688999998655555 68999999865432 111111 1235789999
Q ss_pred cCCCCceEEEeeC
Q psy18091 351 NPVVPGMLASCSD 363 (377)
Q Consensus 351 ~p~~~~~laS~s~ 363 (377)
+|++..++++...
T Consensus 322 s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 322 SADGKTLYVSVKQ 334 (353)
T ss_dssp CTTSCEEEEEEEC
T ss_pred cCCCCEEEEEEcc
Confidence 9965445555444
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=2.8e-20 Score=174.16 Aligned_cols=203 Identities=11% Similarity=0.116 Sum_probs=149.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCC-----------CceE---EeEEecCccCCEEEEEEcCCCCEEE----EE
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRS-----------GQFE---CNATLEGHENEVKSVTWSKNGQFLA----TC 159 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----------~~~~---~~~~~~~h~~~v~~l~~~~~~~~l~----s~ 159 (377)
..++.+++++++.++++++.|+ +++|+... .... .... ..|...|.+++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578889999999999999888 88876321 0100 0111 23567899999999999999 78
Q ss_pred ECCCcEEEEEcCCC--------CceeEEEEeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeeccc
Q psy18091 160 SRDKSVWVWEVGEE--------DEYECAAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKS 230 (377)
Q Consensus 160 ~~dg~v~~wd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~ 230 (377)
+.|+.|++||+... ..+.....+.+|...|.+++|+|+ +++|++++.||.|++||++.... .....+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~----~~~~~~ 190 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK----VCATLP 190 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE----EEEEEC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc----eeeccC
Confidence 89999999998653 222223445678999999999998 78999999999999999986532 234456
Q ss_pred CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC------CCCcceeEEEecccCCE
Q psy18091 231 HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG------HHGRTIYDISWCHLTDL 304 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~ 304 (377)
|...|++++|+|+|++|++|+.|++|++||.. ... ...+.. .+...+.++.|++...+
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~---------------~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE---------------KKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE---------------EEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc---------------cccccCCcccCCCCceeEEEEEEecCceE
Confidence 88899999999999999999999999999864 110 111111 12347899999987666
Q ss_pred EEE-EeCCC------cEEEEEeCCC
Q psy18091 305 IAT-ACGDD------AIRIFKENPE 322 (377)
Q Consensus 305 l~~-~~~d~------~i~v~~~~~~ 322 (377)
+++ +.++| .+++|+....
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEccCCCccCCCCceEEEEeccC
Confidence 544 33443 3889987654
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.87 E-value=2.8e-20 Score=192.70 Aligned_cols=281 Identities=10% Similarity=0.064 Sum_probs=208.5
Q ss_pred cccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
..+.+|.+.+.++.|+++ .++++++.|+++++|..+..+... .. ...|. .+...+|+|+|++|+.+. ++.|.+
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~--~~--l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~ 269 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL--RK--HTSFT-DYYPRHLNTDGRRILFSK-GGSIYI 269 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC--EE--CCCCC-SSCEEEEEESSSCEEEEE-TTEEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc--eE--ecCCC-CcceeeEcCCCCEEEEEe-CCEEEE
Confidence 345789999999999998 677888899999999876322211 11 12333 466789999999998875 899999
Q ss_pred EeCCCCceEEeEEecC-----------ccCCEEEEEEc-CCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-cee
Q psy18091 124 WDKRSGQFECNATLEG-----------HENEVKSVTWS-KNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-DVK 190 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~-----------h~~~v~~l~~~-~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-~v~ 190 (377)
||...+++. .+.+ |...+.+++|+ |+|+++++++ ++.+++|++...... .+..|.. .+.
T Consensus 270 ~d~~~~~l~---~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~----~~~~~~~~~~~ 341 (1045)
T 1k32_A 270 FNPDTEKIE---KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL----KVPEPLRIRYV 341 (1045)
T ss_dssp ECTTTCCEE---ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE----ECSCCSCEEEE
T ss_pred ecCCceEee---eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE----EccCCCcceEE
Confidence 998554432 3333 34468899999 9999998887 789999998765321 2445555 788
Q ss_pred EEEEeeCCcEEEEeeCCCcEE-EEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 191 KVRFHPFDNILASASYDDTVK-LFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 191 ~~~~~~~~~~l~s~s~dg~i~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
.+.|+ +++.++.++.++.+. +|+...... ..+..|...+..++|+|+|++|++++.|+.|++||+...
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-----~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg----- 410 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-----EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG----- 410 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCE-----EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC-----
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCc-----eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC-----
Confidence 99999 999999999888888 888765432 233477788999999999999999999999999996321
Q ss_pred CCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC----------cEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 270 IPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD----------AIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
.......+| ...+..++|+|+++.|+.++.++ .+++|+..... . ....
T Consensus 411 ----------~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----------~-~~l~ 468 (1045)
T 1k32_A 411 ----------KPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----------I-FAAT 468 (1045)
T ss_dssp ----------CEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE----------E-EECS
T ss_pred ----------ceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc----------E-EEee
Confidence 112223233 45788999999999998887654 89999865432 0 1123
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.|...+..++|+| ++..|+.++.++..++|+..
T Consensus 469 ~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 469 TENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CSSSBEEEEEECT-TSCEEEEEESCCCCCEECSS
T ss_pred CCCcccCCceEcC-CCCEEEEEecccCCcCcchh
Confidence 4666788899999 56788899998888888753
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=2.3e-19 Score=178.77 Aligned_cols=291 Identities=9% Similarity=0.051 Sum_probs=183.0
Q ss_pred cccccccC---CEEEEEECCCCCEEEEEeCC---------CcEEEeecccCCCcccceee-eeccCcCceeEEEECCCCC
Q psy18091 44 QTLKGHQG---RVWNVSWNPQGTMISSCGED---------KNIRLWGKESFGNKFTAKAI-LSDGHQRTIRETAWSPCGN 110 (377)
Q Consensus 44 ~~l~~h~~---~V~~v~~~~~g~~l~s~s~D---------~~v~~W~~~~~~~~~~~~~~-~~~~h~~~V~~~~~~~~~~ 110 (377)
..+.+|.. .|.+++|+|||++|++++.+ +.|++||+.+... ..+ ...+|...+..++|+|+|+
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP----QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC----EECCCTTCCSCCCSBCCBCSSTT
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce----EeccCCccccccccccEECCCCC
Confidence 34555654 49999999999999999875 6788999874221 111 1124555588899999999
Q ss_pred EEEEEECCCcEEEEeCCCCceEEeEEecCccCC------------------EEEEEEcCCCCEEEEEECCC---------
Q psy18091 111 FIASASFDATTAVWDKRSGQFECNATLEGHENE------------------VKSVTWSKNGQFLATCSRDK--------- 163 (377)
Q Consensus 111 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~------------------v~~l~~~~~~~~l~s~~~dg--------- 163 (377)
+|+.++. +.|.+||+.+++... ....+... +.+++|+|||++|++++.|+
T Consensus 127 ~la~~~~-~~i~~~~~~~g~~~~--~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 127 QLIFIFE-NNIYYCAHVGKQAIR--VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp CEEEEET-TEEEEESSSSSCCEE--EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EEEEEEC-CeEEEEECCCCceEE--EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 9999885 789999998876432 22333332 37899999999999887553
Q ss_pred -------------------------cEEEEEcCCCCceeEEEEeec------cccceeEEEEeeCCcEEEEeeC----CC
Q psy18091 164 -------------------------SVWVWEVGEEDEYECAAVINA------HIQDVKKVRFHPFDNILASASY----DD 208 (377)
Q Consensus 164 -------------------------~v~~wd~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~s~----dg 208 (377)
.|++||+.+..... .+.. +...+..++|+|+++++++.+. +.
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~---~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL---EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE---ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE---EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 78999987764211 2222 2456888999999998877653 35
Q ss_pred cEEEEecCcccccceeeeecccCCcceE----EEEEcCCCCeEEE--eeCCC----c--EEEEeeeCCCCCCCCCCCCCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVW----SLAFDRIGSRLAT--CSDDA----T--VKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~----~~~~~~~~~~l~s--~s~D~----~--i~iw~~~~~~~~~~~~~~~~~ 276 (377)
.|.+||+...+.. ... ...+...+. .++|+|+|+.|+. +..|+ . |.+|+....+....
T Consensus 281 ~i~~~d~~~g~~~--~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~------- 350 (723)
T 1xfd_A 281 ILTLCDATTGVCT--KKH-EDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN------- 350 (723)
T ss_dssp EEEEEETTTCCEE--EEE-EEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC-------
T ss_pred EEEEEeCCCCcce--EEE-EeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccc-------
Confidence 7889998755421 111 112333332 7899999997774 45677 4 55555212221000
Q ss_pred CcEEEEEeecCCCCccee-EEEecccCCEEEEEeCC---CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 277 SVWKCVCTLSGHHGRTIY-DISWCHLTDLIATACGD---DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 277 ~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d---~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
...+..++ ..+. .+.|+|+++.|+..+.+ +.+++|......... .. .+ .....|...+..++|+|
T Consensus 351 -----~~~l~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~-~~---~l-~~~~~~~~~~~~~~~sp 419 (723)
T 1xfd_A 351 -----IQSITSGD-WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN-RQ---CL-SCDLVENCTYFSASFSH 419 (723)
T ss_dssp -----CCBSCCSS-SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC-CB---CS-STTSSSSCCCCEEEECT
T ss_pred -----eeEeecCC-eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC-cc---ee-cccccCCCCeEEEEECC
Confidence 01111111 2233 36899999988766555 789999876432110 00 00 00011566788999999
Q ss_pred CCCceEEEeeCCC
Q psy18091 353 VVPGMLASCSDDG 365 (377)
Q Consensus 353 ~~~~~laS~s~Dg 365 (377)
++..++++++.++
T Consensus 420 dg~~l~~~~~~~~ 432 (723)
T 1xfd_A 420 SMDFFLLKCEGPG 432 (723)
T ss_dssp TSSEEEEECCSSS
T ss_pred CCCEEEEEccCCC
Confidence 6555555555443
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=8.1e-20 Score=177.68 Aligned_cols=269 Identities=9% Similarity=0.030 Sum_probs=183.6
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---CCcEEEEe
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---DATTAVWD 125 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d~~i~iwd 125 (377)
..+|++++|+|||++||+++. |++++||+++. .. ... +...+...+..++|+|+ +.+++++. +...++|.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~--g~--~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDG--GE--TVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEET--TE--EEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcC--CC--cEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 568999999999999999887 99999999742 11 111 22233357899999999 77777775 45567765
Q ss_pred CCC---CceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 126 KRS---GQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 126 ~~~---~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
+.. +... .+... ..+...+|+|+++. +++.+.++.+.+||+.+.... .....+ . ..+.|+|+|+.+
T Consensus 95 ~~~~~~g~~~---~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~---~l~~~~-~--~~~~~spDG~~l 164 (582)
T 3o4h_A 95 VNTSRPGEEQ---RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR---ELARLP-G--FGFVSDIRGDLI 164 (582)
T ss_dssp EETTSTTCCE---ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE---EEEEES-S--CEEEEEEETTEE
T ss_pred EeccCCCccc---cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE---EeecCC-C--ceEEECCCCCEE
Confidence 432 2222 22222 23446688888753 344444555669999876322 222222 2 778999999999
Q ss_pred EEeeCC----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC--cEEEEeeeCCCCCCCCCCCCC
Q psy18091 202 ASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA--TVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 202 ~s~s~d----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~--~i~iw~~~~~~~~~~~~~~~~ 275 (377)
++++.+ +.|++||+...+. ..+..|...+..++|+|+|+.|+++..|+ .|++||.....
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~~-----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~---------- 229 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGGL-----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS---------- 229 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCCC-----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC----------
T ss_pred EEEEEcCCCCeEEEEEcCCCCCc-----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc----------
Confidence 988877 7799999875543 34567888899999999999999888888 88888753211
Q ss_pred CCcEEEEEeecCCCCcceeEEE--------ecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDIS--------WCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC 347 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 347 (377)
.. .+.++ ...+..+. |+|++.++++++.++.+++|.. .+ ... .+...|.+
T Consensus 230 -----~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---------~~~----~~~~~v~~ 287 (582)
T 3o4h_A 230 -----VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---------RVE----APQGNHGR 287 (582)
T ss_dssp -----EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---------EEC----CCSSEEEE
T ss_pred -----EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---------eec----cCCCceEE
Confidence 11 22232 33455556 9999999999999999999987 11 011 12356889
Q ss_pred EEecCCCCceEEEeeCCCc---EEEEecc
Q psy18091 348 VAWNPVVPGMLASCSDDGD---VKLWQIK 373 (377)
Q Consensus 348 v~~~p~~~~~laS~s~Dg~---i~iWd~~ 373 (377)
++|+ ++.++++++.+.+ +.+||..
T Consensus 288 ~~~s--dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 288 VVLW--RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEE--TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEec--CCEEEEEEcCCCCCCeEEEEcCC
Confidence 9999 4667888887754 6666643
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=7.2e-20 Score=182.03 Aligned_cols=282 Identities=12% Similarity=0.102 Sum_probs=184.1
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc---------------CcCceeEEEECCCCCEEEEEEC
Q psy18091 53 VWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG---------------HQRTIRETAWSPCGNFIASASF 117 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~---------------h~~~V~~~~~~~~~~~l~s~s~ 117 (377)
+..+.|. |..+++++.|+ | +||..+.... ...+.... +...|.+++|+|+ ++++.+ .
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~--~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~ 99 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSA--QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-T 99 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC---------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-E
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEe--eEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-E
Confidence 4456777 66777788888 8 9998753210 01111100 1146999999999 666655 3
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC-----CCceeEEEEeeccccc----
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE-----EDEYECAAVINAHIQD---- 188 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~-----~~~~~~~~~~~~~~~~---- 188 (377)
++.+.+||+.+++.. .+..+...+.+++|+|||++++.+ .++.|++||+.+ ..... ....+...
T Consensus 100 ~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~---~~~~~~~~~~~g 172 (706)
T 2z3z_A 100 QGGLVGFDMLARKVT---YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIA---VTIDGTETLVYG 172 (706)
T ss_dssp TTEEEEEETTTTEEE---EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEE---SCSCCBTTEEES
T ss_pred CCEEEEEECCCCceE---EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEE---eccCCCCCeEcc
Confidence 699999999888643 234466778899999999999885 679999999987 54321 11222221
Q ss_pred ----------eeEEEEeeCCcEEEEee---------------------------------CCCcEEEEecCcccccceee
Q psy18091 189 ----------VKKVRFHPFDNILASAS---------------------------------YDDTVKLFKEDKAEADWINF 225 (377)
Q Consensus 189 ----------v~~~~~~~~~~~l~s~s---------------------------------~dg~i~~~~~~~~~~~~~~~ 225 (377)
+..+.|+|+++.|++++ .+..|.+||+...... .+
T Consensus 173 ~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~--~~ 250 (706)
T 2z3z_A 173 QAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV--YL 250 (706)
T ss_dssp SCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE--EC
T ss_pred cchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE--ee
Confidence 47899999999999987 3467899998755431 11
Q ss_pred eecccCCcceEEEEEcCCCCeEEEeeCCC-----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCc---ceeEEE
Q psy18091 226 ATLKSHTSTVWSLAFDRIGSRLATCSDDA-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGR---TIYDIS 297 (377)
Q Consensus 226 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~ 297 (377)
.....|...+.+++|+|+|++|++++.|+ .|++||..... ....+ ...+... .+..+.
T Consensus 251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~------------~~~~~--~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR------------FVRTL--FVETDKHYVEPLHPLT 316 (706)
T ss_dssp CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC------------EEEEE--EEEECSSCCCCCSCCE
T ss_pred ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc------------eeeEE--EEccCCCeECccCCce
Confidence 22235677899999999999999888775 89999853220 00111 1111111 246789
Q ss_pred ecc--cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeE-EEecCCCCceEEEeeCCC----cEEEE
Q psy18091 298 WCH--LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNC-VAWNPVVPGMLASCSDDG----DVKLW 370 (377)
Q Consensus 298 ~~~--~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~laS~s~Dg----~i~iW 370 (377)
|+| ++++++++..++.+++|........ .. ....|...+.. ++|+|++..++++++.++ .|..|
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~--------~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRL--------IR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCE--------EE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCE--------EE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 999 9999999999999999987522110 11 12345666776 799996555556666666 45555
Q ss_pred eccc
Q psy18091 371 QIKL 374 (377)
Q Consensus 371 d~~~ 374 (377)
|+..
T Consensus 388 d~~~ 391 (706)
T 2z3z_A 388 DIKG 391 (706)
T ss_dssp ETTC
T ss_pred EcCC
Confidence 5543
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=6.7e-18 Score=154.05 Aligned_cols=280 Identities=12% Similarity=0.098 Sum_probs=179.8
Q ss_pred ccCCEEEEEECCCCCEEEEEeCC----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CCCcEEE
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FDATTAV 123 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d~~i~i 123 (377)
|......++|+|||++|++++.+ +.|++|+++........... ...+......+++ ++++|++++ .++.+.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~-~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT-QKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE-EECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE-eccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 56778889999999999999886 79999988742122211111 1123445666777 788777776 5789999
Q ss_pred EeCCCC-ceEEe---EEecC--------ccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCc------eeEE----E
Q psy18091 124 WDKRSG-QFECN---ATLEG--------HENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDE------YECA----A 180 (377)
Q Consensus 124 wd~~~~-~~~~~---~~~~~--------h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~------~~~~----~ 180 (377)
|++... ..... ....+ +...+.+++|+|+|+++++++ .++.|++|++..... +... .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 998643 22111 11111 223468899999999766655 488999999876542 2211 1
Q ss_pred EeeccccceeEEEEeeCCcEEEEee-CCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeC--CCcE
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSD--DATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--D~~i 256 (377)
....+......++|+|+++++++++ .++.|.+|++....... ........+......++|+|+|++|+++.. ++.|
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1223344577899999999877766 68999999987432211 111222334455789999999998866554 5899
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
.+|++.... ........+.. +..+..++|+|++++|++++ .++.+.+|......+.. ..
T Consensus 285 ~v~~~~~~~-----------g~~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~-------~~ 344 (361)
T 3scy_A 285 AIFKVDETN-----------GTLTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL-------TD 344 (361)
T ss_dssp EEEEECTTT-----------CCEEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE-------EE
T ss_pred EEEEEcCCC-----------CcEEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE-------ee
Confidence 999874210 11122333332 34678899999999888887 67999998776543321 11
Q ss_pred ccccceecceeEEEec
Q psy18091 336 TEHRAHNQDVNCVAWN 351 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~ 351 (377)
.....+...+.||+|.
T Consensus 345 ~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 345 IKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CSCCEECSSEEEEEEE
T ss_pred cceeeeCCCCeEEEEc
Confidence 1112345578888885
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=2.9e-19 Score=160.78 Aligned_cols=268 Identities=8% Similarity=0.020 Sum_probs=175.9
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-ceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecC-
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-TIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEG- 139 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~- 139 (377)
+++++++.|++|++||..+. .. ...+..++.. .+..++|+|+++++ +++..++.|.+||+.+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~--~~--~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM--AV--DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--EE--EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCC--cE--EEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 47899999999999998642 11 1112222221 47789999999866 455567899999998887543333221
Q ss_pred --ccCCEEEEEEcCCCCEEEEEE------------CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 140 --HENEVKSVTWSKNGQFLATCS------------RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 140 --h~~~v~~l~~~~~~~~l~s~~------------~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
|...+..++|+|+|+++++++ .++.|.+||+.+.... ..+.. ...+..+.|+|++++++++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~---~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR---KAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE---EEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE---EEEeC-CCCcceeEECCCCCEEEEe-
Confidence 122567899999999988886 6799999999765332 22222 3456778999999988877
Q ss_pred CCCcEEEEecCcccccceeeeecccCC--cceEEEEEcCCCCeEEEeeCC-C-----------------------cEEEE
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRIGSRLATCSDD-A-----------------------TVKIW 259 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~D-~-----------------------~i~iw 259 (377)
++.|.+||....+.. ..+..+. .+ +.|+|++.+++..+.+ + .|.+|
T Consensus 153 -~~~i~~~d~~~~~~~----~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 224 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLV----EDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTM 224 (337)
T ss_dssp -SSSEEEEETTTTEEE----EEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEE
T ss_pred -CCeEEEEECCCCcEe----eeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEE
Confidence 689999998755431 1222221 22 2678988876554433 3 24566
Q ss_pred eeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccc
Q psy18091 260 KEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHR 339 (377)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 339 (377)
|..... .. ...+.. +...+..++|+|+++.++++ ++.+.+|+....+. +....
T Consensus 225 d~~~~~-------------~~-~~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~---------~~~~~- 277 (337)
T 1pby_B 225 DLETGE-------------MA-MREVRI-MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS---------IKRVP- 277 (337)
T ss_dssp ETTTCC-------------EE-EEEEEE-CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE---------EEEEE-
T ss_pred eCCCCC-------------ce-EeecCC-CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC---------cceec-
Confidence 542110 00 111222 23467789999999988887 79999998654321 11111
Q ss_pred ceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
....+.+++|+|+ +..|++++.|+.|++||+...+
T Consensus 278 -~~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 278 -LPHSYYSVNVSTD-GSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp -CSSCCCEEEECTT-SCEEEEESBSSEEEEEETTTCC
T ss_pred -CCCceeeEEECCC-CCEEEEEcCCCcEEEEECcCCc
Confidence 1235789999995 5567777889999999997653
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.4e-19 Score=178.65 Aligned_cols=283 Identities=13% Similarity=0.121 Sum_probs=180.5
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC---ceeEEEECCCCCEEEEEEC---------CCcEE
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR---TIRETAWSPCGNFIASASF---------DATTA 122 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~~~~~~l~s~s~---------d~~i~ 122 (377)
+++|+|+|++++++ .|++|++||..... ... +..+|.. .+.+++|||+|++|+.++. ++.++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~----~~~-~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQ----SYT-ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCC----EEE-EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCc----EEE-EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 67899999766554 69999999987421 111 2233332 3899999999999998876 78999
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---------------
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--------------- 187 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~--------------- 187 (377)
+||+.+++......+ ...+..++|+|||++|+.+. ++.|++||+.+....... ..++..
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~--~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT--FNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--CCCBTTTEEESSCCHHHHHHT
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe--cCCCcCCeEcccccceeeeec
Confidence 999998864110112 24688999999999999885 789999999776432211 112211
Q ss_pred --ceeEEEEeeCCcEEEEeeCCC----------------------------------cEEEEecCccccc-ceee---ee
Q psy18091 188 --DVKKVRFHPFDNILASASYDD----------------------------------TVKLFKEDKAEAD-WINF---AT 227 (377)
Q Consensus 188 --~v~~~~~~~~~~~l~s~s~dg----------------------------------~i~~~~~~~~~~~-~~~~---~~ 227 (377)
....++|+|+|+.|++++.|. .|++||+...... +..+ ..
T Consensus 168 ~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 247 (719)
T 1z68_A 168 LATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAM 247 (719)
T ss_dssp TCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHH
T ss_pred ccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCcc
Confidence 124799999999999987652 6778888754421 0111 22
Q ss_pred cccCCcceEEEEEcCCCCeEEEeeCC--C--cEEEEe----eeCCCCCCCCCCCCCCCcEEEEEeec---CCCCccee--
Q psy18091 228 LKSHTSTVWSLAFDRIGSRLATCSDD--A--TVKIWK----EYKPGNSAGIPTPDNDSVWKCVCTLS---GHHGRTIY-- 294 (377)
Q Consensus 228 ~~~h~~~v~~~~~~~~~~~l~s~s~D--~--~i~iw~----~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~-- 294 (377)
+..|...+.+++|+|+++++++.... + .|.+|| .... + +...+. ..+...+.
T Consensus 248 ~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g-~--------------~~~~~~~~~~~~~~~~~~~ 312 (719)
T 1z68_A 248 IASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW-D--------------CPKTQEHIEESRTGWAGGF 312 (719)
T ss_dssp HHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE-E--------------CCGGGEEEEECSSSCSSSS
T ss_pred CCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC-c--------------eEEEEecccccCCceEccc
Confidence 34688889999999998777764432 2 367777 3211 1 111110 11233444
Q ss_pred ---EEEecccCCEEE--EEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeC----CC
Q psy18091 295 ---DISWCHLTDLIA--TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSD----DG 365 (377)
Q Consensus 295 ---~~~~~~~~~~l~--~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~----Dg 365 (377)
.+.|+|+++.++ ++..++..++|......+.. .. ...+...|..+.+. .+..+++++.. ++
T Consensus 313 ~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~--~~-------lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~ 382 (719)
T 1z68_A 313 FVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA--IQ-------ITSGKWEAINIFRV-TQDSLFYSSNEFEEYPG 382 (719)
T ss_dssp SCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC--EE-------CSCSSSCEEEEEEE-CSSEEEEEESCGGGCTT
T ss_pred cCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce--Ee-------cccCceEEEEEEEE-eCCEEEEEEecCCCCCc
Confidence 788999998544 45567766666554322211 10 11234456676666 45666666655 58
Q ss_pred cEEEEeccc
Q psy18091 366 DVKLWQIKL 374 (377)
Q Consensus 366 ~i~iWd~~~ 374 (377)
..+||.+..
T Consensus 383 ~~~l~~~~~ 391 (719)
T 1z68_A 383 RRNIYRISI 391 (719)
T ss_dssp CBEEEEEEC
T ss_pred eEEEEEEeC
Confidence 999999865
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=1.7e-18 Score=156.66 Aligned_cols=270 Identities=10% Similarity=-0.001 Sum_probs=171.7
Q ss_pred EEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEE
Q psy18091 55 NVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~ 133 (377)
.+++++++.++++++.+++|++||..+. .. ...+..+....+..++|+|++++++ +...++.|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--~~--~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--TV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--EE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--cE--EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4567888999999999999999998642 11 1112222222578899999998654 55568999999999886543
Q ss_pred eEEecCc----cCCEEEEEEcCCCCEEEEEECC------------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 134 NATLEGH----ENEVKSVTWSKNGQFLATCSRD------------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 134 ~~~~~~h----~~~v~~l~~~~~~~~l~s~~~d------------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
....... ...+..++|+|+|+++++++.+ +.|.+||+.+........... +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 3222211 2236789999999999988865 899999997643322222222 2335788899999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecccCC------------------------cceEEEEEcCCCC--------
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLKSHT------------------------STVWSLAFDRIGS-------- 245 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~------------------------~~v~~~~~~~~~~-------- 245 (377)
++ +++++ +.|.+||....+.. ..+..+. .....+++++++.
T Consensus 159 g~-l~~~~--~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 159 GS-LYVAG--PDIYKMDVKTGKYT----VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp SC-EEEES--SSEEEECTTTCCEE----EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred Cc-EEEcc--CcEEEEeCCCCcee----ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 99 55544 34999998654421 1111110 0233456655432
Q ss_pred ---eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEeCCCcEEEEEeCC
Q psy18091 246 ---RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 246 ---~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~~~~~ 321 (377)
++.....++.+++|+... .+..+..+.++| +++.++++ ++.+.+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFAD-------------------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-------------------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT
T ss_pred ceeEEEEeccCCcEEeccccc-------------------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECcc
Confidence 112333345555554311 234677899999 99988888 88999998654
Q ss_pred CCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+ .+.... ....+.+++|+|+ +..|++++.++.|++||+...
T Consensus 285 ~~---------~~~~~~--~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 285 RK---------LIKAAN--LDHTYYCVAFDKK-GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp TE---------EEEEEE--CSSCCCEEEECSS-SSCEEEESBSSEEEEEETTTT
T ss_pred Ce---------EEEEEc--CCCCccceEECCC-CCEEEEecCCCeEEEEecccc
Confidence 32 111111 1234778999995 455666788999999999754
No 155
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=1.7e-17 Score=149.25 Aligned_cols=252 Identities=9% Similarity=0.058 Sum_probs=163.2
Q ss_pred ccccCCEEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC---cEE
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA---TTA 122 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~---~i~ 122 (377)
..+...+ .++|+|+|+++++++. ++.|++||..+.. .... . ...+.....+++|+|++++++++..++ .|.
T Consensus 37 ~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--~~~~-~-~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 37 TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP--PKVV-A-IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS--CEEE-E-EEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc--eeEE-e-cccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 3445566 9999999997666655 8999999987422 1011 1 123444444489999999999555443 899
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCc-EEEEEcCCCCceeEE-EEeeccccceeEEEEeeCCc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKS-VWVWEVGEEDEYECA-AVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~-v~~wd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~ 199 (377)
+||..+++... .+.. .....+++|+|+|++++ +...++. +.+|++......... ............+.|+|+++
T Consensus 112 v~d~~~~~~~~--~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 112 SYSFLKNKFIS--TIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EEETTTTEEEE--EEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred EEECCCCCeEE--EEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 99999886543 3332 34578999999998655 4456688 999999765433211 11112334578899999998
Q ss_pred EE-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCCCCCCCCCCCCC
Q psy18091 200 IL-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGNSAGIPTPDNDS 277 (377)
Q Consensus 200 ~l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~~~~~~~~~~~~ 277 (377)
++ +++..++.|.+||+..... ......+. ....+..++|+|+|++++ +...++.|.+||......
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~----------- 255 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPEN-ITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL----------- 255 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTS-CEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE-----------
T ss_pred EEEEEeCCCCeEEEEECCCCcc-cceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce-----------
Confidence 55 5555689999999875442 00122222 335677899999999665 455688899998632111
Q ss_pred cEEEEEeecCC---CCc---ceeEEEecccCCEEEEEeC-CCcEEEEEeCC
Q psy18091 278 VWKCVCTLSGH---HGR---TIYDISWCHLTDLIATACG-DDAIRIFKENP 321 (377)
Q Consensus 278 ~~~~~~~~~~~---~~~---~v~~~~~~~~~~~l~~~~~-d~~i~v~~~~~ 321 (377)
..+..+..+ ... ....++|+|+++.|++++. ++.+.+|+...
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 256 --SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp --EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred --eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 011111111 111 2255899999998766655 66999998754
No 156
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=1.1e-17 Score=153.09 Aligned_cols=293 Identities=11% Similarity=0.011 Sum_probs=176.6
Q ss_pred EEEEeCC--CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-CCceEEeEEecCcc
Q psy18091 65 ISSCGED--KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQFECNATLEGHE 141 (377)
Q Consensus 65 l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~h~ 141 (377)
++.|+.. +.|.+|+++...................+..++|+|+|++|++++.+ .+.+|++. +++.........+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~- 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG- 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-
Confidence 4444432 45777765432222211111111233467889999999999999888 99999986 7765432222211
Q ss_pred CCEEEEEEcCCCCE--EEEEE-------------CCCcEEEEEcCCCCcee-EEEEee-ccccceeEEEEeeCCcEEEEe
Q psy18091 142 NEVKSVTWSKNGQF--LATCS-------------RDKSVWVWEVGEEDEYE-CAAVIN-AHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 142 ~~v~~l~~~~~~~~--l~s~~-------------~dg~v~~wd~~~~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+.+++|+|+|++ +++++ .++.+.+|++....... ...... .+...+..++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23556899999984 45553 68999999997433222 111111 234568899999999988776
Q ss_pred e-CCCcEEEEecC-cccccceeeeecc--cCCcceEEEEEcCCCCeEEEeeC-CCcEEEEeeeCC-CCCCCCCCCCCCCc
Q psy18091 205 S-YDDTVKLFKED-KAEADWINFATLK--SHTSTVWSLAFDRIGSRLATCSD-DATVKIWKEYKP-GNSAGIPTPDNDSV 278 (377)
Q Consensus 205 s-~dg~i~~~~~~-~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~-D~~i~iw~~~~~-~~~~~~~~~~~~~~ 278 (377)
. .++.|++|++. ..+. .....+. .|...+..++|+|+|+++++++. ++.|.+|+.... +... ..
T Consensus 163 ~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~--------~~ 232 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV--------YT 232 (365)
T ss_dssp ETTTTEEEEEEECTTSCE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE--------EE
T ss_pred cCCCCEEEEEEECCCCCE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE--------Ec
Confidence 5 46799999986 3322 1122222 24567899999999998887764 789999975321 1100 00
Q ss_pred EEEEEeecCC---CCc------ceeEEE-ecccCCEEEEEeCC-C-----cEEEEEeCCCCCCCcceeeeeeecccccee
Q psy18091 279 WKCVCTLSGH---HGR------TIYDIS-WCHLTDLIATACGD-D-----AIRIFKENPEAGDSDMVSFDLVHTEHRAHN 342 (377)
Q Consensus 279 ~~~~~~~~~~---~~~------~v~~~~-~~~~~~~l~~~~~d-~-----~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~ 342 (377)
......+..+ +.. .+..+. |+|+++.|+++..+ + .+.+|+.... +. +.. +......+.
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~-g~--~~~---~~~~~~~~~ 306 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC-GS--IEK---QLFLSPTPT 306 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT-SC--EEE---EEEEEECSS
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC-CC--EEE---eeeeeecCC
Confidence 0011122111 111 478899 99999988776643 3 8999987531 11 111 000011233
Q ss_pred cceeEEEecCC--CCceEEEeeC-CCcEEEEecccC
Q psy18091 343 QDVNCVAWNPV--VPGMLASCSD-DGDVKLWQIKLE 375 (377)
Q Consensus 343 ~~v~~v~~~p~--~~~~laS~s~-Dg~i~iWd~~~~ 375 (377)
..+..++|+|. ++.+|++++. +++|++|++..+
T Consensus 307 ~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 307 SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 45677899993 3456776665 599999998754
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=8.7e-18 Score=154.59 Aligned_cols=291 Identities=13% Similarity=0.022 Sum_probs=181.0
Q ss_pred ccccccCCEEE-----EEECCCCCEEEEEeC-CCc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE
Q psy18091 45 TLKGHQGRVWN-----VSWNPQGTMISSCGE-DKN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS 116 (377)
Q Consensus 45 ~l~~h~~~V~~-----v~~~~~g~~l~s~s~-D~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s 116 (377)
.|..|.+.+.. .+|+|||++|+.++. ++. |.+||... .. .. .+..++...+...+|+|+|+.|+.++
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~--~~-~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QV--AT-QLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--CE--EE-ECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--Cc--eE-EeeeCCCCCccceEEcCCCCEEEEEe
Confidence 45566666665 789999999998887 775 66667653 11 11 12334555555678999999999999
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEE--EcCCCCEEEEEE----------------------CCCcEEEEEcCC
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVT--WSKNGQFLATCS----------------------RDKSVWVWEVGE 172 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~--~~~~~~~l~s~~----------------------~dg~v~~wd~~~ 172 (377)
.++.+.+||+.+++..... ..+...+.... ++|++++++... .+..|++||+.+
T Consensus 100 ~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVY--QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp TTTEEEEEETTTCCEEEEE--ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred CCCeEEEEECCCCcceeee--echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 9999999999988755433 33444443333 489998877432 446799999987
Q ss_pred CCceeEEEEeeccccceeEEEEee-CCcEEEEeeCC------CcEEEEecCcccccceeeeecccCC--cceEEEEEcCC
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFATLKSHT--STVWSLAFDRI 243 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~ 243 (377)
.... .+..+...+..+.|+| +++.++....+ ..|.+++...... ..+..+. ..+...+|+|+
T Consensus 178 g~~~----~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 178 GEST----VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-----RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp CCEE----EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-----EESCCCCTTEEEEEEEECTT
T ss_pred CceE----EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-----EEeeeCCCCcccccceECCC
Confidence 6432 2233455688899999 99988877654 2677777654332 2233333 35778899999
Q ss_pred CCeEEEeeCC-C----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC--CcceeEEEecccCCEEEEE--------
Q psy18091 244 GSRLATCSDD-A----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--GRTIYDISWCHLTDLIATA-------- 308 (377)
Q Consensus 244 ~~~l~s~s~D-~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-------- 308 (377)
|+.|+..+.+ + .|.+||+.... ...+..+.++. ......+.|+|+++.|+..
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~-------------~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 315 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLE-------------NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYK 315 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCC-------------EEEEEEECCEEEEEECTTSSEEEEEECCC-----------
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCc-------------eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccc
Confidence 9987654432 2 38889863221 11122222200 0001223688988876643
Q ss_pred -eCCCcEEEEEeCCCCCCCcceeeeeeeccccceec-----------ceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 309 -CGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 309 -~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.++..|.+|+....+. .. + ..|.. .+.+++|+|++..++.++..+|...||.+...
T Consensus 316 ~~~~~~i~~~d~~~~~~----~~--l-----~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 316 IENDPFLYVFNMKNGTQ----HR--V-----ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp -CCCCEEEEEETTTTEE----EE--E-----EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cCCCCEEEEEeccCCce----EE--e-----ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 4566888887654321 10 1 11222 47888999964444445556888889887643
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=4.9e-18 Score=169.22 Aligned_cols=290 Identities=13% Similarity=0.116 Sum_probs=180.7
Q ss_pred CEEEEEECCCCCEEEEEeC---------CCcEEEeecccCCCcccc-eeeeeccCcCceeEEEECCCCCEEEEEECCCcE
Q psy18091 52 RVWNVSWNPQGTMISSCGE---------DKNIRLWGKESFGNKFTA-KAILSDGHQRTIRETAWSPCGNFIASASFDATT 121 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~---------D~~v~~W~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i 121 (377)
.|.+++|+|||++|++++. |++|++||+++. .... .. ....+..++|+|+|++|+.+. |+.|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~-----l~~~~~~~~~SPDG~~la~~~-~~~i 132 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNE-----LPRPIQYLCWSPVGSKLAYVY-QNNI 132 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSC-----CCSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--cccccee-----cCcccccceECCCCCEEEEEE-CCeE
Confidence 3899999999999998887 789999998742 1100 11 124578899999999999886 7899
Q ss_pred EEEeCCCCceEEeEEecCccCCE-----------------EEEEEcCCCCEEEEEECCC---------------------
Q psy18091 122 AVWDKRSGQFECNATLEGHENEV-----------------KSVTWSKNGQFLATCSRDK--------------------- 163 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v-----------------~~l~~~~~~~~l~s~~~dg--------------------- 163 (377)
++||+.+++.... ...++...| .+++|+|||++|++++.|.
T Consensus 133 ~~~~~~~g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 133 YLKQRPGDPPFQI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEESSTTSCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEeCCCCCcEEE-ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9999988764321 122333323 4899999999999887652
Q ss_pred -------------cEEEEEcCCCCce---eEE--EEeeccccceeEEEEeeCCcEEEEeeCCC----cEEEEe----cCc
Q psy18091 164 -------------SVWVWEVGEEDEY---ECA--AVINAHIQDVKKVRFHPFDNILASASYDD----TVKLFK----EDK 217 (377)
Q Consensus 164 -------------~v~~wd~~~~~~~---~~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~dg----~i~~~~----~~~ 217 (377)
.|++||+.+.... ... ..+..|...+..++|+|+++++++....+ .|.+|| ...
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 7889998765421 100 01124666788999999988777754332 377788 544
Q ss_pred ccccceeeeec----ccCCcceE-----EEEEcCCCCeEE--EeeCCCcEEEE--eeeCCCCCCCCCCCCCCCcEEEEEe
Q psy18091 218 AEADWINFATL----KSHTSTVW-----SLAFDRIGSRLA--TCSDDATVKIW--KEYKPGNSAGIPTPDNDSVWKCVCT 284 (377)
Q Consensus 218 ~~~~~~~~~~~----~~h~~~v~-----~~~~~~~~~~l~--s~s~D~~i~iw--~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
.+.. ..+ ..|...+. .+.|+|+|+.|+ +...++..++| +..... ...
T Consensus 292 g~~~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----------------~~~ 351 (719)
T 1z68_A 292 WDCP----KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----------------AIQ 351 (719)
T ss_dssp EECC----GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----------------CEE
T ss_pred CceE----EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----------------eEe
Confidence 3321 112 35666665 789999999654 45566655555 432111 012
Q ss_pred ecCCCCcceeEEEecccCCEEEEEeC-----CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 285 LSGHHGRTIYDISWCHLTDLIATACG-----DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 285 ~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
+..+ ...+..+.+. +++.++..+. ++..++|......+.... ..+.....+|...+..++|+|++..++.
T Consensus 352 lt~~-~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 352 ITSG-KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSK---KCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp CSCS-SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCE---EESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred cccC-ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCc---eeccCccCCCCCceEEEEECCCCCEEEE
Confidence 2221 2245555555 6665555554 488999987542221100 0111111235567888999996555554
Q ss_pred EeeCC--CcEEEEecccC
Q psy18091 360 SCSDD--GDVKLWQIKLE 375 (377)
Q Consensus 360 S~s~D--g~i~iWd~~~~ 375 (377)
+++.+ ..+.+||+...
T Consensus 427 ~~s~~~~p~~~l~d~~~g 444 (719)
T 1z68_A 427 VCYGPGIPISTLHDGRTD 444 (719)
T ss_dssp EECCBSSCEEEEECSSSC
T ss_pred EcCCCCCCeEEEEECCCC
Confidence 55544 46788887543
No 159
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.80 E-value=6.5e-17 Score=146.53 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=167.9
Q ss_pred cCceeEEEECCCCCEEEEEEC-------CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEE
Q psy18091 97 QRTIRETAWSPCGNFIASASF-------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVW 168 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~w 168 (377)
...+..++|+|+++++++++. ++.|.+||..+++....... ...+..++|+|++++++ +...++.|.+|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 356788999999998888774 56899999998875443332 24577899999999655 45557999999
Q ss_pred EcCCCCceeEEEEeecccc---------ceeEEEEeeCCcEEEEee--CCCcEEEEecCcccccceeeeecccCCcceEE
Q psy18091 169 EVGEEDEYECAAVINAHIQ---------DVKKVRFHPFDNILASAS--YDDTVKLFKEDKAEADWINFATLKSHTSTVWS 237 (377)
Q Consensus 169 d~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~s--~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~ 237 (377)
|..+..... .+..+.. .+..+.|+|+++.+++++ .++.|.+||....+. ...+..+...+..
T Consensus 117 d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 117 DAKTGEVKG---RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTG 189 (353)
T ss_dssp ETTTCCEEE---EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE----EEEECCCCTTCCC
T ss_pred eCCCCeeEE---EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce----EEEecCCCCccce
Confidence 998765432 2222211 267899999998777665 478899999875543 2333334555778
Q ss_pred EEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC---CCCcceeEEEecccCCEEEEEeC-CCc
Q psy18091 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG---HHGRTIYDISWCHLTDLIATACG-DDA 313 (377)
Q Consensus 238 ~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-d~~ 313 (377)
++|+|+|+++++++.++.|.+||.... .....+.. .....+..++|+|+++.+++++. ++.
T Consensus 190 ~~~s~dg~~l~~~~~~~~i~~~d~~~~---------------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 190 LALDSEGKRLYTTNADGELITIDTADN---------------KILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp CEEETTTTEEEEECTTSEEEEEETTTT---------------EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCC---------------eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 999999999999999999999985322 11112211 12335778999999987766665 589
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+.+|+....+. +.....+ .-.+++|+|++..++++...++.|.+||....
T Consensus 255 v~~~d~~~~~~---------~~~~~~~---~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 255 VLVVDTRNGNI---------LAKVAAP---ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEEETTTCCE---------EEEEECS---SCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEECCCCcE---------EEEEEcC---CCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 99998754331 1111111 12568999965556777778999999998754
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=6.5e-17 Score=147.93 Aligned_cols=255 Identities=11% Similarity=0.095 Sum_probs=164.3
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCE--EEEEE-----------
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNF--IASAS----------- 116 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~--l~s~s----------- 116 (377)
...+..++|+|+|++|++++.+ .|++|++...+ ..... .....+ +....++|+|+|++ +++++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-~~~~~-~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-EIVHE-ASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-EEEEE-EEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-CEEEe-eEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 3467889999999999999988 99999986212 11111 001111 22455789999994 44553
Q ss_pred --CCCcEEEEeCC-CCceEEeE-Eec-CccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcC-CCCceeEEEEee--cccc
Q psy18091 117 --FDATTAVWDKR-SGQFECNA-TLE-GHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVG-EEDEYECAAVIN--AHIQ 187 (377)
Q Consensus 117 --~d~~i~iwd~~-~~~~~~~~-~~~-~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~-~~~~~~~~~~~~--~~~~ 187 (377)
.++.+.+|++. .++..... .+. .+...+.+++|+|+|+++++++. ++.|++||+. +.. ......+. .+..
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~-~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-VELVGSVDAPDPGD 193 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-EEEEEEEECSSTTC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC-EEEeeeEecCCCCC
Confidence 68999999986 45543221 111 24567999999999998887764 6899999997 432 22222232 2345
Q ss_pred ceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccce----eeeec----ccCCc------ceEEEE-EcCCCCeEEEee
Q psy18091 188 DVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWI----NFATL----KSHTS------TVWSLA-FDRIGSRLATCS 251 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~----~~~~~----~~h~~------~v~~~~-~~~~~~~l~s~s 251 (377)
.+..++|+|+++++++++. ++.+.+|+......... .+..+ .+|.. .+..++ |+|+|++|+++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 6888999999998877765 68999997653211111 11112 12332 588999 999999887665
Q ss_pred CC-C-----cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc---cCCEEEEEeCC-CcEEEEEeCC
Q psy18091 252 DD-A-----TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH---LTDLIATACGD-DAIRIFKENP 321 (377)
Q Consensus 252 ~D-~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d-~~i~v~~~~~ 321 (377)
.+ + .|.+|++...+. ...........+.....++++| ++++|++++.+ +.+++|+...
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~------------~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGS------------IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSC------------EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCCCeEEEEEECCCCC------------EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 43 3 899998742111 1111111111233456788899 78999988864 8999998754
No 161
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=5.9e-17 Score=145.62 Aligned_cols=236 Identities=9% Similarity=0.055 Sum_probs=163.0
Q ss_pred CEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccC----cCceeEEEECCCCCEEEEEE----------
Q psy18091 52 RVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGH----QRTIRETAWSPCGNFIASAS---------- 116 (377)
Q Consensus 52 ~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s~s---------- 116 (377)
.+..++|+|+|+++ ++++.++.|.+||..+. ... ..+..++ ...+..++|+|+|+++++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--ETL--GRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTC--CEE--EEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCC--CeE--eeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 47889999999765 56667899999998642 111 1111122 23577899999999988886
Q ss_pred --CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 117 --FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 --~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
.++.|.+||+.+++... .+.. ...+.+++|+|++++++++ ++.|++||+.+.... ..+..+.. ...+.|
T Consensus 111 ~~~~~~i~v~d~~~~~~~~--~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~---~~~~~~~~-~~~~~~ 181 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRK--AFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLV---EDKPIQSW-EAETYA 181 (337)
T ss_dssp EECCCEEEEEETTTTEEEE--EEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEE---EEECSTTT-TTTTBC
T ss_pred cccCceEEEEECCCCcEEE--EEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEe---eeeecccc-CCCcee
Confidence 57999999998876543 2322 3467889999999988887 688999999876432 22332220 112367
Q ss_pred eeCCcEEEEeeCCC------------------------cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEe
Q psy18091 195 HPFDNILASASYDD------------------------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATC 250 (377)
Q Consensus 195 ~~~~~~l~s~s~dg------------------------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 250 (377)
+|++..++..+..+ .|.+||....+.. ...+..+...+.+++|+|+|++++++
T Consensus 182 s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCCceeeEEECCCCCEEEEe
Confidence 88887665544333 3578887654432 22334566678899999999998887
Q ss_pred eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCC
Q psy18091 251 SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 251 s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~ 322 (377)
++.|.+||.... +....+.. +..+..++|+|+++.+++++.++.+++|+....
T Consensus 259 --~~~v~~~d~~~~---------------~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 259 --YNVLESFDLEKN---------------ASIKRVPL--PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp --ESEEEEEETTTT---------------EEEEEEEC--SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred --CCeEEEEECCCC---------------cCcceecC--CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 789999985321 12223322 235788999999999988899999999987543
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=9.7e-18 Score=163.02 Aligned_cols=233 Identities=10% Similarity=0.064 Sum_probs=159.8
Q ss_pred CcCceeEEEECCCCCEEEEEEC-CCcEEEEeCCCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEEC---CCcEEEEEc
Q psy18091 96 HQRTIRETAWSPCGNFIASASF-DATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSR---DKSVWVWEV 170 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~ 170 (377)
+..+|++++|+|||++||.++. |+.++||++.+++.. .+..|. ..+..++|+|| +.+++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~---~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV---KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE---ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE---eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 3557999999999999999887 999999998776542 334444 68999999999 77887775 555667665
Q ss_pred CC--CCceeEEEEeeccccceeEEEEeeCCcE-EEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 171 GE--EDEYECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 171 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
.. ..... .+.. .......+|+|+++. +++...++.+.+|++...... .+..+.. .+++|+|+|++|
T Consensus 96 ~~~~~g~~~---~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~-----~l~~~~~--~~~~~spDG~~l 164 (582)
T 3o4h_A 96 NTSRPGEEQ---RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR-----ELARLPG--FGFVSDIRGDLI 164 (582)
T ss_dssp ETTSTTCCE---ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESS--CEEEEEEETTEE
T ss_pred eccCCCccc---cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE-----EeecCCC--ceEEECCCCCEE
Confidence 44 22211 1211 223445688888753 334444455559998654421 1222322 789999999999
Q ss_pred EEeeCC----CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCC--cEEEEEeCC
Q psy18091 248 ATCSDD----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDD--AIRIFKENP 321 (377)
Q Consensus 248 ~s~s~D----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~v~~~~~ 321 (377)
++++.| ..|++||+.... ...+.+| ...+..++|+|+++.|+++..++ .|++|+...
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~----------------~~~l~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGG----------------LRVFDSG-EGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCC----------------CEEECCS-SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCCCC----------------ceEeecC-CCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988877 778899853221 1233343 34679999999999999888888 677776543
Q ss_pred CCCCCcceeeeeeeccccceecceeEEE--------ecCCCCceEEEeeCCCcEEEEec
Q psy18091 322 EAGDSDMVSFDLVHTEHRAHNQDVNCVA--------WNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~--------~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
.+. . ...+|...+..++ |+|+ +.++++++.||+++||++
T Consensus 228 ~~~---------~--~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 GSV---------E--DLELPSKDFSSYRPTAITWLGYLPD-GRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCE---------E--ECCCSCSHHHHHCCSEEEEEEECTT-SCEEEEEEETTEEEEEET
T ss_pred CcE---------E--EccCCCcChhhhhhccccceeEcCC-CcEEEEEEcCCcEEEEEE
Confidence 321 1 1234555666666 9996 488999999999999997
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.76 E-value=5.3e-17 Score=162.29 Aligned_cols=288 Identities=15% Similarity=0.178 Sum_probs=174.4
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcC-----ceeEEEECCCCCEEEEEECC-------
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQR-----TIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~l~s~s~d------- 118 (377)
....++.|+|||++++++ |++|++||..+... .. +..+|.. ...+++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNS----SV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCE----EE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCce----EE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 346689999999999986 99999999875321 11 2234432 23457899999999998876
Q ss_pred --CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---------
Q psy18091 119 --ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ--------- 187 (377)
Q Consensus 119 --~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~--------- 187 (377)
+.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. ++.|++|++.+....... ..++..
T Consensus 90 ~~~~~~~~d~~~~~~~---~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt--~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLI---TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRIT--WTGKEDIIYNGITDW 163 (740)
T ss_dssp EEEEEEEEETTTTEEC---CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC--SCCBTTTEEESBCCH
T ss_pred cceEEEEEECCCCcEE---EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEc--CCCCccceecCcccc
Confidence 55679999998753 3556778899999999999998884 689999998776432211 112211
Q ss_pred --------ceeEEEEeeCCcEEEEeeCCC------------------------------------cEEEEecCc---ccc
Q psy18091 188 --------DVKKVRFHPFDNILASASYDD------------------------------------TVKLFKEDK---AEA 220 (377)
Q Consensus 188 --------~v~~~~~~~~~~~l~s~s~dg------------------------------------~i~~~~~~~---~~~ 220 (377)
....+.|+|+|+.|+.++.|. .|++||+.. ...
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 123588999999999876432 356666654 311
Q ss_pred -cceeeee---cccCCcceEEEEEcCCCCeEEEeeC----CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE--ee--cCC
Q psy18091 221 -DWINFAT---LKSHTSTVWSLAFDRIGSRLATCSD----DATVKIWKEYKPGNSAGIPTPDNDSVWKCVC--TL--SGH 288 (377)
Q Consensus 221 -~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~s~----D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~ 288 (377)
....+.. +.+|...+..++|+|+|+.++.... +..|++||...... .+.|.. .+ .+
T Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~-----------~~~~~~~~~l~~~~- 311 (740)
T 4a5s_A 244 ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG-----------RWNCLVARQHIEMS- 311 (740)
T ss_dssp CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT-----------EEEECGGGCEEEEC-
T ss_pred ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcc-----------ccceeEEEEeeecc-
Confidence 1111110 1137778999999999996665432 34789998754320 000110 00 11
Q ss_pred CCccee-----EEEecccCCEEE-EEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEE-ecCCCCceEEE
Q psy18091 289 HGRTIY-----DISWCHLTDLIA-TAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA-WNPVVPGMLAS 360 (377)
Q Consensus 289 ~~~~v~-----~~~~~~~~~~l~-~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~-~~p~~~~~laS 360 (377)
+...+. ...|+|+++.++ ..+ .+|.-.||......+.. .+.-.+ ...|..+. ++ +..++++
T Consensus 312 ~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~--------~~lT~g-~~~v~~~~~~d--~~~i~f~ 380 (740)
T 4a5s_A 312 TTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC--------TFITKG-TWEVIGIEALT--SDYLYYI 380 (740)
T ss_dssp SSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC--------EESCCS-SSCEEEEEEEC--SSEEEEE
T ss_pred CCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce--------EecccC-CEEEEEEEEEe--CCEEEEE
Confidence 122332 678999998765 554 45655555433222111 011112 22344433 44 4556666
Q ss_pred eeC----CCcEEEEeccc
Q psy18091 361 CSD----DGDVKLWQIKL 374 (377)
Q Consensus 361 ~s~----Dg~i~iWd~~~ 374 (377)
++. .+...||.+..
T Consensus 381 ~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 381 SNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp ESCGGGCTTCBEEEEEET
T ss_pred EecCCCCCceeEEEEEEC
Confidence 655 35566776643
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=3.8e-16 Score=154.05 Aligned_cols=292 Identities=10% Similarity=0.014 Sum_probs=186.7
Q ss_pred cccccccCCEEEEEECCCCCEEEEE--eCCCcEEEeecccCCCcccceeeeeccCcCcee---------EEEEC--CCCC
Q psy18091 44 QTLKGHQGRVWNVSWNPQGTMISSC--GEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR---------ETAWS--PCGN 110 (377)
Q Consensus 44 ~~l~~h~~~V~~v~~~~~g~~l~s~--s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~--~~~~ 110 (377)
+.+.+|...+..++|++++-++++. +.++..+||.....+. .+. ...|...+. ..+|+ |+|+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~--l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA---EES--ALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC---EEE--SSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC---cce--eCCCCccccccccccCCccceeeeecCCC
Confidence 4678899999999999887777777 6688999998632111 111 223444544 55565 9999
Q ss_pred E-EEEEEC-CCcEEEEeCC--C-CceEEeEEecC-----ccCCEEEEEEcCCCCEEEEEECC----------CcEEEEEc
Q psy18091 111 F-IASASF-DATTAVWDKR--S-GQFECNATLEG-----HENEVKSVTWSKNGQFLATCSRD----------KSVWVWEV 170 (377)
Q Consensus 111 ~-l~s~s~-d~~i~iwd~~--~-~~~~~~~~~~~-----h~~~v~~l~~~~~~~~l~s~~~d----------g~v~~wd~ 170 (377)
+ |+.++. +..|.+++.. + ++.. .+.. |...+..++|+|||+.|+.++.+ ..|++||+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~---~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPR---PLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCE---ECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCE---eccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEEC
Confidence 8 776543 4566666665 3 4432 3333 56778999999999999988877 58999999
Q ss_pred CCC-----CceeEEEEee-ccccceeEEEEeeCCcEEEEeeCCC--------cEEEEecCc-ccc-cceeeeecccCCcc
Q psy18091 171 GEE-----DEYECAAVIN-AHIQDVKKVRFHPFDNILASASYDD--------TVKLFKEDK-AEA-DWINFATLKSHTST 234 (377)
Q Consensus 171 ~~~-----~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~dg--------~i~~~~~~~-~~~-~~~~~~~~~~h~~~ 234 (377)
.+. ... ..+. .+...+..+.|+|+|+.|+.++.++ .|.+|++.. ... .. ......|...
T Consensus 169 ~~~~~~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~--~~l~~~~~~~ 243 (662)
T 3azo_A 169 DGSAAADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT--RTLLGGPEEA 243 (662)
T ss_dssp TSTTTTCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE--EEEEEETTBC
T ss_pred CCCccccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc--EEeCCCCCce
Confidence 772 122 1233 4445677789999999999887553 688999873 310 11 1122345678
Q ss_pred eEEEEEcCCCCeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCC-------cceeEEEecccCCEEE
Q psy18091 235 VWSLAFDRIGSRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHG-------RTIYDISWCHLTDLIA 306 (377)
Q Consensus 235 v~~~~~~~~~~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~ 306 (377)
+..++|+|+|+++++++.|+..++|.... .++. .....++.. ..+..+++++++.+++
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~--------------~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA--------------TQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE--------------EESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCce--------------eecccccccccCccccccCceEeEeCCCEEEE
Confidence 99999999999888888888555554321 1110 001111110 0145678888889999
Q ss_pred EEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE-EecCCCCceEEEeeCCCcEEEEecc
Q psy18091 307 TACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV-AWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 307 ~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
++.. +.+++|......+. . . ....|...+..+ ++++ +..++++++.+....||.+.
T Consensus 310 ~~~~-~~~~l~~~d~~~~~--~------~-~l~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 310 VHGK-GAAVLGILDPESGE--L------V-DAAGPWTEWAATLTVSG-TRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EEBS-SSCEEEEEETTTTE--E------E-ECCSSCCEEEEEEEEET-TEEEEEEEETTEEEEEEEEE
T ss_pred EEEc-CccEEEEEECCCCc--E------E-EecCCCCeEEEEEecCC-CEEEEEEcCCCCCCEEEEEE
Confidence 9998 99999965433211 1 1 112355567777 6665 34455666777666666543
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=5.4e-14 Score=123.73 Aligned_cols=242 Identities=15% Similarity=0.209 Sum_probs=169.1
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee----ccCcCceeEEEE-CCCCCEEEEEEC-CCc
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAW-SPCGNFIASASF-DAT 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~----~~h~~~V~~~~~-~~~~~~l~s~s~-d~~ 120 (377)
.+|-....+++++++|.++++.+.++.|++|+.+ +... ..+.. .+|...+..+++ .++++++++... ++.
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE--GRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT--SCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC--CcEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 4566789999999999999998999999999875 2211 11111 234557889999 567776666543 889
Q ss_pred EEEEeCCCCceEEeEEe-cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee--ccccceeEEEEeeC
Q psy18091 121 TAVWDKRSGQFECNATL-EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN--AHIQDVKKVRFHPF 197 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~ 197 (377)
|.+||. +++.. ..+ ..+...+..+++.|+|+.+++...++.|.+||.... .. ..+. .+...+..++++|+
T Consensus 102 i~~~d~-~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~---~~~~~~~~~~~p~~i~~~~~ 174 (286)
T 1q7f_A 102 IQIYNQ-YGQFV--RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VL---HKFGCSKHLEFPNGVVVNDK 174 (286)
T ss_dssp EEEECT-TSCEE--EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EE---EEEECTTTCSSEEEEEECSS
T ss_pred EEEECC-CCcEE--EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EE---EEeCCCCccCCcEEEEECCC
Confidence 999994 45432 223 234467899999999998888778899999996432 11 1222 34456889999999
Q ss_pred CcEEEEeeCCCcEEEEecCcccccceeeeecc--cCCcceEEEEEcCCCCeEEEeeCCC-cEEEEeeeCCCCCCCCCCCC
Q psy18091 198 DNILASASYDDTVKLFKEDKAEADWINFATLK--SHTSTVWSLAFDRIGSRLATCSDDA-TVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 198 ~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~-~i~iw~~~~~~~~~~~~~~~ 274 (377)
++++++...++.|++|+..... +..+. ++...+..++++++|.++++...++ .|.+|+.. +
T Consensus 175 g~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~--g--------- 238 (286)
T 1q7f_A 175 QEIFISDNRAHCVKVFNYEGQY-----LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--G--------- 238 (286)
T ss_dssp SEEEEEEGGGTEEEEEETTCCE-----EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--S---------
T ss_pred CCEEEEECCCCEEEEEcCCCCE-----EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--C---------
Confidence 9988888889999999975321 12222 2335788999999999888888886 99999731 1
Q ss_pred CCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 275 NDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
..+..+..+. ...+..++++++++++++ +.++.|++|+...
T Consensus 239 -----~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 239 -----QLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -----CEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -----CEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 0122222221 234678999998876666 6799999997643
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.70 E-value=9.5e-16 Score=141.07 Aligned_cols=277 Identities=12% Similarity=0.041 Sum_probs=167.8
Q ss_pred CCEEEEEECCCCCEEEEEeCC-C--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGED-K--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D-~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~ 127 (377)
..+..++|+|||++|+....+ + .|.+|+... .. ... +..++........|+|+|++|+.++.++.+.+||+.
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~--~~--~~~-l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET--QQ--AVQ-LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--TE--EEE-CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCC--Cc--EEE-eecCCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 347788999999998776543 3 577777653 11 111 122222223336899999999999999999999998
Q ss_pred CCceEEeEEecCccCCEEE-------------------EEEcCCCCEEEEE-----ECCCcEEEEEcCCCCceeEEEEee
Q psy18091 128 SGQFECNATLEGHENEVKS-------------------VTWSKNGQFLATC-----SRDKSVWVWEVGEEDEYECAAVIN 183 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~l~s~-----~~dg~v~~wd~~~~~~~~~~~~~~ 183 (377)
+++...... .+...... +.|+|+++.++.+ ..+..|++||+.+..... +.
T Consensus 111 ~~~~~~~~~--~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~----~~ 184 (396)
T 3c5m_A 111 TLEEQVIYT--VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV----IH 184 (396)
T ss_dssp TCCEEEEEE--CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE----EE
T ss_pred CCCcEEEEe--cccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe----ec
Confidence 886543322 22222222 3457777765543 456789999998754322 22
Q ss_pred ccccceeEEEEee-CCcEEEEeeCC------CcEEEEecCcccccceeeeecccC--CcceEEEEEcCCCCeEEEeeCC-
Q psy18091 184 AHIQDVKKVRFHP-FDNILASASYD------DTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 184 ~~~~~v~~~~~~~-~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
.+...+..+.|+| ++..++..+.+ ..|.+|+...... ..+..+ ...+..++|+|+|++|+.++.+
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFK 259 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceEECCCCCEEEEEecCC
Confidence 3456788899999 78777666543 3577787654321 122222 3357889999999988777654
Q ss_pred ----CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecc-cCCEEEEEe----------------CCC
Q psy18091 254 ----ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCH-LTDLIATAC----------------GDD 312 (377)
Q Consensus 254 ----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~ 312 (377)
+.|++||+.... ...+..+.+ .. +.|+| ++++++.++ ++.
T Consensus 260 ~~~~~~l~~~d~~~g~-------------~~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 260 GQTDRVIYKANPETLE-------------NEEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp TTCCEEEEEECTTTCC-------------EEEEEECCS-----EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred CCccceEEEEECCCCC-------------eEEeeeCCC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 448999853211 111111111 22 78898 888887754 346
Q ss_pred cEEEEEeCCCCCCCcceeeeeeeccccceec-----------ceeEEEecCCCCceEEEe-eCCCcEEEEeccc
Q psy18091 313 AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQ-----------DVNCVAWNPVVPGMLASC-SDDGDVKLWQIKL 374 (377)
Q Consensus 313 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~v~~~p~~~~~laS~-s~Dg~i~iWd~~~ 374 (377)
.+.+|+...... .. + ..|.. .+..++|+|+ +..|+.+ ..++...||.+..
T Consensus 321 ~i~~~d~~~~~~----~~--l-----~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 321 FLYVLNTKAKSA----QK--L-----CKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp EEEEEETTTTBC----CE--E-----EECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEEC
T ss_pred cEEEEecccCce----EE--c-----cCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEEE
Confidence 777777543321 00 1 11222 2566789995 4455544 4567777777653
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=6.4e-14 Score=123.26 Aligned_cols=246 Identities=10% Similarity=0.096 Sum_probs=165.4
Q ss_pred cCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe----cCccCCEEEEEE-cCCCCEEEEEEC-CCcEEEE
Q psy18091 95 GHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL----EGHENEVKSVTW-SKNGQFLATCSR-DKSVWVW 168 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~h~~~v~~l~~-~~~~~~l~s~~~-dg~v~~w 168 (377)
++.....+++++++++++++...++.|.+||.... ....... .+|...+..+++ .++++.+++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 45667889999999998888888999999998743 2211111 134567899999 467766665533 7899999
Q ss_pred EcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE
Q psy18091 169 EVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL 247 (377)
Q Consensus 169 d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 247 (377)
|.. .... ..+ ..+...+..++++|+++++++...++.|.+|+...... .......+...+..++++++|.++
T Consensus 106 d~~-g~~~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~---~~~~~~~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 106 NQY-GQFV---RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL---HKFGCSKHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp CTT-SCEE---EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEE---EEEECTTTCSSEEEEEECSSSEEE
T ss_pred CCC-CcEE---EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEE---EEeCCCCccCCcEEEEECCCCCEE
Confidence 943 3221 222 23345688999999999888888889999998653211 111112344568899999999988
Q ss_pred EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC-CCcceeEEEecccCCEEEEEeCCC-cEEEEEeCCCCCC
Q psy18091 248 ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH-HGRTIYDISWCHLTDLIATACGDD-AIRIFKENPEAGD 325 (377)
Q Consensus 248 ~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~~~~~~~~~ 325 (377)
++.+.++.|++|+... .....+..+ ....+..+++++++.++++...++ .|.+|+....
T Consensus 179 v~~~~~~~i~~~~~~g----------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~--- 239 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEG----------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ--- 239 (286)
T ss_dssp EEEGGGTEEEEEETTC----------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC---
T ss_pred EEECCCCEEEEEcCCC----------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC---
Confidence 8888899999998421 012222221 113578899999998888888886 9999973211
Q ss_pred CcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 326 SDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 326 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
.+.. +.. ......+.+++++| ++.++++ +.|++|++|++...
T Consensus 240 -~~~~---~~~--~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 240 -LISA---LES--KVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -EEEE---EEE--SSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEECSCC
T ss_pred -EEEE---Ecc--cCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEcccc
Confidence 0111 110 11223477899999 4667777 57999999998653
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=6e-14 Score=126.83 Aligned_cols=258 Identities=11% Similarity=0.124 Sum_probs=164.7
Q ss_pred CCEEEEEECCCCCEEEEEe---------CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---
Q psy18091 51 GRVWNVSWNPQGTMISSCG---------EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD--- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s---------~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d--- 118 (377)
..+...++ ||++++... .++.|.+|+.... . ...+ ..+..++|+|+|++|+.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~--~--~~~l------~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN--A--RRFI------ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC--C--EEEE------ESCEEEEECTTSSEEEEEEEETTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC--c--eEEc------ccCCCeEECCCCCEEEEEEeccCC
Confidence 35667777 888876542 2567888887632 1 1111 457889999999999887754
Q ss_pred Cc--EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC---------------------------CcEEEEE
Q psy18091 119 AT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD---------------------------KSVWVWE 169 (377)
Q Consensus 119 ~~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d---------------------------g~v~~wd 169 (377)
+. |.+||+.+++...... +.. +..++|+|+|+.|+.++.+ ..|++||
T Consensus 83 ~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 83 KVSEIWVADLETLSSKKILE---AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CcceEEEEECCCCceEEEEc---CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 33 7777888776443322 223 8999999999988877632 5688999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC-------cEEEEecCcccccceeeeecccCCcceEEEEEcC
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD-------TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR 242 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-------~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 242 (377)
+.+...... +.. . .+..+.|+|++ +++++..++ ...+|...... . ..+..+ ..+..+ +|
T Consensus 159 ~~~~~~~~~---l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~---~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 159 TESEEVIEE---FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--E---EKMFEK-VSFYAV--DS 224 (347)
T ss_dssp TTTTEEEEE---EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--E---EEEEEE-ESEEEE--EE
T ss_pred CCCCeEEee---ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--e---EEeccC-cceeeE--CC
Confidence 877643121 222 2 67889999999 777776542 44555444211 1 122223 445544 89
Q ss_pred CCCeEEEeeCCC--------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeE-EEecccCCEEEEEeCCCc
Q psy18091 243 IGSRLATCSDDA--------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYD-ISWCHLTDLIATACGDDA 313 (377)
Q Consensus 243 ~~~~l~s~s~D~--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~ 313 (377)
+|++|+.++.+. .|.+|+ .+. ...+..++...+.. +.|+ ++ ++++++.++.
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d---~~~---------------~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD---GKE---------------VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC---SSC---------------EEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred CCCEEEEEEccccCCccccceEEEEC---CCc---------------eEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 999988777543 566665 111 11122223346665 8898 77 8999999999
Q ss_pred EEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE-EEEecc
Q psy18091 314 IRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV-KLWQIK 373 (377)
Q Consensus 314 i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i-~iWd~~ 373 (377)
+++| .. . +. .. . + ..+...|.+++|+| .++++++.++.. +||.+.
T Consensus 285 ~~l~-~~-~-g~--~~--~-~----~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IW-D-GE--IK--P-I----AKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EE-S-SS--EE--E-E----ECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred EEEE-Ec-C-Cc--eE--E-E----ecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 9999 76 2 21 11 1 1 12356789999998 367777777765 888764
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=7.9e-14 Score=125.51 Aligned_cols=248 Identities=10% Similarity=0.055 Sum_probs=168.5
Q ss_pred cCCEEEEEECCCCCEEEEEeCC------------------------CcEEEeecccCCCcccceeeeeccCcCceeEEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGED------------------------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW 105 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D------------------------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~ 105 (377)
-+.+.+++++|+|+++++.+.+ ++|.+||..+. .. ......++......+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g--~~--~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA--EI--LQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC--CE--EEEECTTTCSSEEEEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC--eE--EeccCCCccCCceEEEE
Confidence 4689999999999999998887 47999987532 11 11222345557889999
Q ss_pred CCCCCEEEEEECCCcEEEEeCCCCceEEeEEe---------cCccCCEEEEEEcC-CCCEEEEEE-CCCcEEEEEcCCCC
Q psy18091 106 SPCGNFIASASFDATTAVWDKRSGQFECNATL---------EGHENEVKSVTWSK-NGQFLATCS-RDKSVWVWEVGEED 174 (377)
Q Consensus 106 ~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---------~~h~~~v~~l~~~~-~~~~l~s~~-~dg~v~~wd~~~~~ 174 (377)
+|+|+++++...++.|++||..... .....+ .++......++++| +++.+++.+ .++.|++||....
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~- 176 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK- 176 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC-
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCe-EEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC-
Confidence 9999988888889999999976442 112223 34555789999999 788777776 6899999994332
Q ss_pred ceeEEEEe-------eccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC----
Q psy18091 175 EYECAAVI-------NAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR---- 242 (377)
Q Consensus 175 ~~~~~~~~-------~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---- 242 (377)
........ ..+......++++|+ +.++++...++.|++|+...... ........+...+.+++|+|
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTTCEEEEEEETTEEE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCCCcceeeecCCEEE
Confidence 21111100 112334788999998 78888888999999999863322 11122235666788999999
Q ss_pred --CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec--CCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 243 --IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 243 --~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+|..+++.+.+..|++|+.... ..+..+. ..+......+++++++.++++...++.|++|+
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g---------------~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSG---------------EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTC---------------CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCC---------------eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence 3333333344558899985321 1122221 11234678999999998888888999999997
Q ss_pred eC
Q psy18091 319 EN 320 (377)
Q Consensus 319 ~~ 320 (377)
..
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=1.9e-14 Score=141.83 Aligned_cols=253 Identities=8% Similarity=-0.009 Sum_probs=155.8
Q ss_pred ccccccccCCEE---------EEEEC--CCCCE-EEEEeC-CCcEEEeecccCC-Ccccceeeeecc---CcCceeEEEE
Q psy18091 43 SQTLKGHQGRVW---------NVSWN--PQGTM-ISSCGE-DKNIRLWGKESFG-NKFTAKAILSDG---HQRTIRETAW 105 (377)
Q Consensus 43 ~~~l~~h~~~V~---------~v~~~--~~g~~-l~s~s~-D~~v~~W~~~~~~-~~~~~~~~~~~~---h~~~V~~~~~ 105 (377)
.+.+..|...+. ...|+ |||++ |+..+. +..|.+|+....+ .. ...+.... |...+..++|
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~--~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV--PRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC--CEECSCCCCSTTCEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC--CEeccCCccCCCCccccCcEE
Confidence 345666665555 55565 99998 765554 4455555543001 11 11111111 5667889999
Q ss_pred CCCCCEEEEEECC----------CcEEEEeCCC------CceEEeEEec-CccCCEEEEEEcCCCCEEEEEECC------
Q psy18091 106 SPCGNFIASASFD----------ATTAVWDKRS------GQFECNATLE-GHENEVKSVTWSKNGQFLATCSRD------ 162 (377)
Q Consensus 106 ~~~~~~l~s~s~d----------~~i~iwd~~~------~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d------ 162 (377)
+|+|+.|+.++.| ..|.+||+.+ ++.. .+. .+...+..++|+|||++|+.++.+
T Consensus 138 spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 138 LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR---ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE---ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee---EEEecCCCcccCceECCCCCEEEEEECCCCCCCC
Confidence 9999999998877 5899999987 5543 344 555678889999999999887755
Q ss_pred --CcEEEEEcCC-CCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEE--EecCcccccceeeeecccCCcc---
Q psy18091 163 --KSVWVWEVGE-EDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKL--FKEDKAEADWINFATLKSHTST--- 234 (377)
Q Consensus 163 --g~v~~wd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~--~~~~~~~~~~~~~~~~~~h~~~--- 234 (377)
..|++||+.. +...........+...+..+.|+|+|+++++++.++..++ |+....+ +..+ ...+...
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~--~~~l--~~~~~~~~~p 290 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA--ATQL--CRREEEFAGP 290 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC--EEES--SCCSSBSSCC
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc--eeec--ccccccccCc
Confidence 3799999983 3111222233445677889999999998888888885455 4543222 1111 1112111
Q ss_pred -----eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEE-EecccCCEEEEE
Q psy18091 235 -----VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDI-SWCHLTDLIATA 308 (377)
Q Consensus 235 -----v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~ 308 (377)
+..++|++++.++++++. +.+++|....... ....+..+ ...+..+ ++....-+++++
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--------------~~~~l~~~-~~~~~~~~s~~~~~~~~~~~ 354 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--------------ELVDAAGP-WTEWAATLTVSGTRAVGVAA 354 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--------------EEEECCSS-CCEEEEEEEEETTEEEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--------------cEEEecCC-CCeEEEEEecCCCEEEEEEc
Confidence 457889999999999998 9999996532111 02233333 2345555 433322244455
Q ss_pred eCCCcEEEEEeC
Q psy18091 309 CGDDAIRIFKEN 320 (377)
Q Consensus 309 ~~d~~i~v~~~~ 320 (377)
+.+....+|...
T Consensus 355 ~~~~~~~i~~~d 366 (662)
T 3azo_A 355 SPRTAYEVVELD 366 (662)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 566666777654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.66 E-value=4.3e-14 Score=127.27 Aligned_cols=251 Identities=11% Similarity=0.083 Sum_probs=169.0
Q ss_pred cCceeEEEECCCCCEEEEEECC------------------------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC
Q psy18091 97 QRTIRETAWSPCGNFIASASFD------------------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN 152 (377)
Q Consensus 97 ~~~V~~~~~~~~~~~l~s~s~d------------------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~ 152 (377)
...+..++++|+|+++++...+ +.|.+||..++++.. ..-.++......++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ-SSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE-EECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe-ccCCCccCCceEEEECCC
Confidence 4578999999999999888777 479999998887542 222245567899999999
Q ss_pred CCEEEEEECCCcEEEEEcCCCCceeEEEEe---------eccccceeEEEEee-CCcEEEEee-CCCcEEEEecCccccc
Q psy18091 153 GQFLATCSRDKSVWVWEVGEEDEYECAAVI---------NAHIQDVKKVRFHP-FDNILASAS-YDDTVKLFKEDKAEAD 221 (377)
Q Consensus 153 ~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~s-~dg~i~~~~~~~~~~~ 221 (377)
|+.+++...++.|+.||....... ...+ ..+......++++| ++.++++.+ .++.|++|+......
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~--~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~- 178 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGP--LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFV- 178 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCC--SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEE-
T ss_pred CCEEEEECCCCEEEEEeCCCCeEE--EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEE-
Confidence 998888888999999997654211 1122 23344678999999 788888886 799999998542211
Q ss_pred ceeeeec-------ccCCcceEEEEEcCC-CCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCCcc
Q psy18091 222 WINFATL-------KSHTSTVWSLAFDRI-GSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHGRT 292 (377)
Q Consensus 222 ~~~~~~~-------~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 292 (377)
..+... .++-.....++++|+ +.++++...++.|++|+.... .++..+. ...+..
T Consensus 179 -~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------------~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 179 -TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------------EFVREIKHASFGRN 242 (329)
T ss_dssp -EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------------CEEEEECCTTTTTC
T ss_pred -EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------------cEEEEEeccccCCC
Confidence 011100 122334789999998 778888888999999985311 1122221 113456
Q ss_pred eeEEEecc------cCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCc
Q psy18091 293 IYDISWCH------LTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGD 366 (377)
Q Consensus 293 v~~~~~~~------~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~ 366 (377)
++.+.++| +++..++...+..+++|+..... .. . .+ ....++...+..|+++|+ +.++++...++.
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~----~~-~-~~-~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~ 314 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE----II-D-VF-KPVRKHFDMPHDIVASED-GTVYIGDAHTNT 314 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC----EE-E-EE-CCSSSCCSSEEEEEECTT-SEEEEEESSSCC
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe----EE-E-EE-cCCCCccCCeeEEEECCC-CCEEEEECCCCE
Confidence 77888888 22222223345588888765432 11 0 01 011356677899999995 688999999999
Q ss_pred EEEEecccC
Q psy18091 367 VKLWQIKLE 375 (377)
Q Consensus 367 i~iWd~~~~ 375 (377)
|++|++...
T Consensus 315 I~~~~~~~~ 323 (329)
T 3fvz_A 315 VWKFTLTEK 323 (329)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeCCcc
Confidence 999998653
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=9.4e-14 Score=138.77 Aligned_cols=201 Identities=15% Similarity=0.158 Sum_probs=130.8
Q ss_pred EEEEEECCCCCEEEEEeCC---------CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 53 VWNVSWNPQGTMISSCGED---------KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D---------~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
...++|||||++|+.++.+ +.+.+||+.+. .. .. ...|...+...+|||+|+.||.+. |+.|.+
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~--~~--~~--l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR--QL--IT--EERIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EE--CC--SSCCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC--cE--EE--cccCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 3458899999999999887 45569998742 11 11 235667899999999999999885 789999
Q ss_pred EeCCCCceEEeEEecCccCCE-----------------EEEEEcCCCCEEEEEECCC-----------------------
Q psy18091 124 WDKRSGQFECNATLEGHENEV-----------------KSVTWSKNGQFLATCSRDK----------------------- 163 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v-----------------~~l~~~~~~~~l~s~~~dg----------------------- 163 (377)
|+..+++... ....++...+ ..+.|+|||++|+.++.|.
T Consensus 137 ~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (740)
T 4a5s_A 137 KIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (740)
T ss_dssp ESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCccee
Confidence 9998876432 2223333333 3589999999998875332
Q ss_pred -------------cEEEEEcCC---CCceeEEEEee-----ccccceeEEEEeeCCcEEEEeeC----CCcEEEEecCcc
Q psy18091 164 -------------SVWVWEVGE---EDEYECAAVIN-----AHIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKA 218 (377)
Q Consensus 164 -------------~v~~wd~~~---~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~ 218 (377)
+|++||+.+ ........... .+...+..++|+|+++.++.... +..|.+||....
T Consensus 216 ~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg 295 (740)
T 4a5s_A 216 VPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES 295 (740)
T ss_dssp EECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT
T ss_pred ecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC
Confidence 477788876 52111111111 25666889999999997665533 336899998765
Q ss_pred ccccee--eeec--ccCCcceE-----EEEEcCCCCeEE-Eee-CCCc--EEEEee
Q psy18091 219 EADWIN--FATL--KSHTSTVW-----SLAFDRIGSRLA-TCS-DDAT--VKIWKE 261 (377)
Q Consensus 219 ~~~~~~--~~~~--~~h~~~v~-----~~~~~~~~~~l~-s~s-~D~~--i~iw~~ 261 (377)
+..+.. ...+ ..|...|. ..+|+|+|+.|+ ..+ .+|. |.+|+.
T Consensus 296 ~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 296 SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp TTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred ccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 411100 1111 33554444 678999999877 665 4554 555553
No 173
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.64 E-value=8.6e-15 Score=132.15 Aligned_cols=192 Identities=13% Similarity=0.073 Sum_probs=132.7
Q ss_pred CEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccC-----cCceeEEEECCCCCEEEEEECC-------
Q psy18091 52 RVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 52 ~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~~~~~~~l~s~s~d------- 118 (377)
.+..++|+|+|+++ +++..++.|++||..+. ... ..+...+ ...+..++|+|+|+++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~--~~~--~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 119 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC--KNT--FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 119 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTT--EEE--EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCC--cEE--EEEEcccccccccccccceEECCCCCEEEEEcccccccccc
Confidence 57889999999865 56667899999998642 111 1111122 2347889999999999988865
Q ss_pred -----CcEEEEeCCCCceEE-eEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-------
Q psy18091 119 -----ATTAVWDKRSGQFEC-NATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH------- 185 (377)
Q Consensus 119 -----~~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~------- 185 (377)
+.|.+||+.+++... ...+. +...+.+++|+|+|+ ++.++ +.|++||+.+...... +..+
T Consensus 120 ~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~---~~~~~~~~~~~ 192 (349)
T 1jmx_B 120 YVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVA---LPLRNWNRKGY 192 (349)
T ss_dssp EEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEE---ECSTTCCCTTB
T ss_pred cccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceecc---ccccccCCccc
Confidence 899999988754321 12232 334688999999999 55554 3499999876542211 1111
Q ss_pred -------------------------------------------------------------ccceeEEEEee-CCcEEEE
Q psy18091 186 -------------------------------------------------------------IQDVKKVRFHP-FDNILAS 203 (377)
Q Consensus 186 -------------------------------------------------------------~~~v~~~~~~~-~~~~l~s 203 (377)
...+..+.++| +++++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 193 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp CCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE
T ss_pred cCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE
Confidence 11344667789 9988888
Q ss_pred eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 204 ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 204 ~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
+ ++.|.+||+...+. ...+. ....+.+++|+|+|++|++++.++.|++||.
T Consensus 273 ~--~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 273 V--LNRLAKYDLKQRKL----IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp E--ESEEEEEETTTTEE----EEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred E--cCeEEEEECccCeE----EEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 8 88999999875442 11222 2334678999999998888888999999985
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.63 E-value=3.1e-13 Score=121.49 Aligned_cols=284 Identities=8% Similarity=0.048 Sum_probs=179.1
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..|+++.|++++..++..+.++.++.|... .+ . ....+...+.+++|+|++++++++..++.|.+||..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~--~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----PW--L--EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----EE--E--EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred cccceeeecCCccceeEEeecccCcccccc----ee--E--EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc
Confidence 457788899988888877889999999321 11 1 112355567899999999988888889999999998886
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECC----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRD----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.... ...+...+.+++++|+|+.+++...+ +.|.+||.......... ....+...+..+.++|+++++++...
T Consensus 78 ~~~~--~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 78 IKRP--FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII-EDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp EEEE--EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE-CSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred EEEE--eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE-ccCccCCcccceEECCCCCEEEEecc
Confidence 5432 22456789999999999988877666 68999998765422111 00123356889999999988877654
Q ss_pred ------CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcE
Q psy18091 207 ------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVW 279 (377)
Q Consensus 207 ------dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~ 279 (377)
.+.|..++...... ..+..+...+..++|+|+|+.| ++.+.++.|.+|+....+..... ...
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~------~~~ 223 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTV-----TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQP------FGA 223 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCE-----EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEE------EEE
T ss_pred ccccCCCceEEEEeCCCCEE-----EEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccc------ccc
Confidence 24455555432221 1111223357889999999855 55566889999986422111000 000
Q ss_pred EEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEE
Q psy18091 280 KCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLA 359 (377)
Q Consensus 280 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~la 359 (377)
.....+.++ ..+..+.+.++++++++...++.|.+|+.... ....+.. .....+|...+.+++|+|++..+++
T Consensus 224 ~~~~~~~~~--~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~----~~~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 224 TIPYYFTGH--EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY----PIGQILI-PGRDEGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp EEEEECCSS--SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC----EEEEEEC-TTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred eEEEecCCC--CCCCceEECCCCCEEEEEcCCCEEEEECCCCC----EEEEEEc-CCCccccccCcceEEECCCCCEEEE
Confidence 011112221 35677899998888888888899999965211 0111100 0000133446899999985445555
Q ss_pred EeeC
Q psy18091 360 SCSD 363 (377)
Q Consensus 360 S~s~ 363 (377)
++..
T Consensus 297 ~~~~ 300 (333)
T 2dg1_A 297 CSND 300 (333)
T ss_dssp EEEC
T ss_pred EeCc
Confidence 5544
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=3.7e-13 Score=133.82 Aligned_cols=287 Identities=11% Similarity=0.083 Sum_probs=176.7
Q ss_pred CCCCEEEEEeCCC-c--EEEeecccCCCcccceee-----eeccCcCceeEEEECCCCCEEEEEECCC-----cEEEEeC
Q psy18091 60 PQGTMISSCGEDK-N--IRLWGKESFGNKFTAKAI-----LSDGHQRTIRETAWSPCGNFIASASFDA-----TTAVWDK 126 (377)
Q Consensus 60 ~~g~~l~s~s~D~-~--v~~W~~~~~~~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~s~s~d~-----~i~iwd~ 126 (377)
|+|++++-...++ . -.+|.....+.. .+.+ +..+|...+..++|||+|++|+.++.++ .|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGE--ARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSC--CEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCC--cEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 7888776544332 2 245654321211 1111 1223445688899999999998765543 8999999
Q ss_pred CCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc----------------EEEEEcCCCCce-eEEEEeeccccce
Q psy18091 127 RSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----------------VWVWEVGEEDEY-ECAAVINAHIQDV 189 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~----------------v~~wd~~~~~~~-~~~~~~~~~~~~v 189 (377)
.+++.... .+.. ..+..++|+|||+.|+.++.++. |++|++.+.... ........+...+
T Consensus 159 ~tg~~~~~-~~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~ 235 (710)
T 2xdw_A 159 DGAKELPD-VLER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWM 235 (710)
T ss_dssp TTTEEEEE-EEEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred CCCCCCcc-cccC--cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEE
Confidence 99875432 2221 23567999999999998888776 999999775421 1111112234456
Q ss_pred eEEEEeeCCcEEEEeeC-----CCcEEEEecCc------ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----
Q psy18091 190 KKVRFHPFDNILASASY-----DDTVKLFKEDK------AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA---- 254 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~-----dg~i~~~~~~~------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---- 254 (377)
..+.|+|++++|+.++. +..|.+|++.. +... ...+..+...+.. .|+++|..|+..+.++
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~ 311 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK---WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNY 311 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC---CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTC
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc---eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCC
Confidence 78999999999887765 56789998865 3211 2334445555544 4788898877665533
Q ss_pred cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC-cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeee
Q psy18091 255 TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG-RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDL 333 (377)
Q Consensus 255 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~ 333 (377)
.|.+|++..+... .+ ..+..+.. ..+..+.|++.+.++++...++..++|......+. .
T Consensus 312 ~l~~~d~~~~~~~----------~~---~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---~---- 371 (710)
T 2xdw_A 312 RLINIDFTDPEES----------KW---KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA---L---- 371 (710)
T ss_dssp EEEEEETTSCCGG----------GC---EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC---E----
T ss_pred EEEEEeCCCCCcc----------cc---eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC---E----
Confidence 5888875332110 11 12233333 36778888877778888888988777765432211 0
Q ss_pred eeccccceecceeEEEecCCCCceEEEee---CCCcEEEEecccCC
Q psy18091 334 VHTEHRAHNQDVNCVAWNPVVPGMLASCS---DDGDVKLWQIKLEN 376 (377)
Q Consensus 334 ~~~~~~~h~~~v~~v~~~p~~~~~laS~s---~Dg~i~iWd~~~~~ 376 (377)
+.. ...+...|..++++|.+..++++.+ ..++|++||+...+
T Consensus 372 ~~~-l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 372 LKI-FPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEE-ECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEe-cCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 111 1234556888999995544444433 45889999987543
No 176
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=1.6e-11 Score=108.00 Aligned_cols=288 Identities=9% Similarity=0.022 Sum_probs=190.4
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
+..+...+.+++++++|.+.++...++.|..||.. + ... ......+...+..++++++|+..++...++.|..||
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~--~-~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD--G-KIT--EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT--C-CEE--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC--C-CeE--EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence 34455789999999999988877778899999875 2 111 111122446788999999999888776688899999
Q ss_pred CCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 126 KRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.. ++... ..+......+..+++.++++.+++...++.|..||. ... ... .........+..+.+++++.++++..
T Consensus 85 ~~-g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 85 KK-GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK-IRE-YELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC-EEE-EECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CC-CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC-EEE-ecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 76 44322 223334567899999999988888777889999997 322 221 11223345688899999998888887
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (377)
.++.|..|+. .... .. .....+...+..++++++|.++++...++.|.+|+. .. . ... ...
T Consensus 160 ~~~~i~~~~~-~g~~--~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g-~------------~~~-~~~ 220 (299)
T 2z2n_A 160 QNNAIGRITE-SGDI--TE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG-E------------ITE-FKI 220 (299)
T ss_dssp TTTEEEEECT-TCCE--EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC-C------------EEE-EEC
T ss_pred CCCEEEEEcC-CCcE--EE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC-c------------EEE-EEC
Confidence 7889999987 3222 11 112234456889999999998877777888999874 11 1 010 011
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDG 365 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg 365 (377)
.. ....+..+.+.+++.++++...++.+..|+... ....+. ...+...+.++++ + ++.++++.+ .+
T Consensus 221 ~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-----~~~~~~-----~~~~~~~~~~i~~-~-~g~l~v~~~-~~ 286 (299)
T 2z2n_A 221 PT-PNARPHAITAGAGIDLWFTEWGANKIGRLTSNN-----IIEEYP-----IQIKSAEPHGICF-D-GETIWFAME-CD 286 (299)
T ss_dssp SS-TTCCEEEEEECSTTCEEEEETTTTEEEEEETTT-----EEEEEE-----CSSSSCCEEEEEE-C-SSCEEEEET-TT
T ss_pred CC-CCCCceeEEECCCCCEEEeccCCceEEEECCCC-----ceEEEe-----CCCCCCccceEEe-c-CCCEEEEec-CC
Confidence 11 234678899998888777766788999997521 111111 1133456889999 7 456666555 45
Q ss_pred cEEEEecccCC
Q psy18091 366 DVKLWQIKLEN 376 (377)
Q Consensus 366 ~i~iWd~~~~~ 376 (377)
.|..++.+.++
T Consensus 287 ~l~~~~~~~~~ 297 (299)
T 2z2n_A 287 KIGKLTLIKDN 297 (299)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEcCccc
Confidence 66667777654
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=5.5e-14 Score=139.47 Aligned_cols=283 Identities=12% Similarity=0.039 Sum_probs=173.4
Q ss_pred CCCCCEEEEEeCCC---cEEEeecccCCCcccceeee-----eccCcCceeEEEECCCCCEEE-----EEECCCcEEEEe
Q psy18091 59 NPQGTMISSCGEDK---NIRLWGKESFGNKFTAKAIL-----SDGHQRTIRETAWSPCGNFIA-----SASFDATTAVWD 125 (377)
Q Consensus 59 ~~~g~~l~s~s~D~---~v~~W~~~~~~~~~~~~~~~-----~~~h~~~V~~~~~~~~~~~l~-----s~s~d~~i~iwd 125 (377)
+|+|++++-...++ .-.+|.....+.. .+.++ ..+|...+..++|||+|++|| .|+.+..|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQ--EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSC--CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCC--cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 37898887666654 4566755422221 12221 124555788999999999988 444557899999
Q ss_pred CCCCceEEeEEecCccCCE--EEEEEcCCCCEEEEEECCCc-------------EEEEEcCCCCce-eEEEEeeccccce
Q psy18091 126 KRSGQFECNATLEGHENEV--KSVTWSKNGQFLATCSRDKS-------------VWVWEVGEEDEY-ECAAVINAHIQDV 189 (377)
Q Consensus 126 ~~~~~~~~~~~~~~h~~~v--~~l~~~~~~~~l~s~~~dg~-------------v~~wd~~~~~~~-~~~~~~~~~~~~v 189 (377)
+.+++... ..+...+ ..++|+|||+.|+.++.|.. |++|++.+.... ........+...+
T Consensus 154 l~tg~~~~----~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 154 VDSGEWSK----VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp TTTCCBCS----SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred CCCCCCcC----CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 99887430 1122222 67899999999999988876 999999876421 1222222344567
Q ss_pred eEEEEeeCCcEEEEeeCCC----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee---CCCcEEEEeee
Q psy18091 190 KKVRFHPFDNILASASYDD----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS---DDATVKIWKEY 262 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~dg----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~D~~i~iw~~~ 262 (377)
..+.|+|+|++++.++.++ .|.+++.... . ...+..+...+....+ ++|.+++... .++.|.+|++.
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--~---~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--D---FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--S---CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--c---eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC
Confidence 8899999999988877665 5666654322 2 2233345545556566 5566444433 25788888864
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
.+... .|. .+..++ ...+..++++ .+.++++...|+..++|....... . .......+
T Consensus 304 ~~~~~----------~~~---~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~----~~~l~~~~ 361 (695)
T 2bkl_A 304 KPARA----------SWK---EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK----P----VRTVQLPG 361 (695)
T ss_dssp BCSGG----------GCE---EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC----E----EEECCCSS
T ss_pred CCCcc----------CCe---EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC----e----eEEecCCC
Confidence 32110 011 122222 4467778887 567888889999999997653211 0 11111112
Q ss_pred ecceeEEEecCCCCceEE---EeeCCCcEEEEecccC
Q psy18091 342 NQDVNCVAWNPVVPGMLA---SCSDDGDVKLWQIKLE 375 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~la---S~s~Dg~i~iWd~~~~ 375 (377)
...|..++++|++..+++ |....++|++||+...
T Consensus 362 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 362 VGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 456778889995444443 3345688999998754
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.62 E-value=1.2e-13 Score=136.92 Aligned_cols=246 Identities=11% Similarity=0.051 Sum_probs=157.5
Q ss_pred ccccCCEEEEEECCCCCEEE-----EEeCCCcEEEeecccCCCcccceeeeeccCcCce--eEEEECCCCCEEEEEECCC
Q psy18091 47 KGHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTI--RETAWSPCGNFIASASFDA 119 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~-----s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V--~~~~~~~~~~~l~s~s~d~ 119 (377)
++|...+.+++|||||++|| +|+.+.+|++||+++.. ... ..+...+ ..++|+|+|+.|+.++.|.
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--~~~-----~~~~~~~~~~~~~wspDg~~l~~~~~d~ 189 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--WSK-----VDVIEGGKYATPKWTPDSKGFYYEWLPT 189 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--BCS-----SCCBSCCTTCCCEECTTSSEEEEEECCC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--CcC-----CcccCcccccceEEecCCCEEEEEEecC
Confidence 45667899999999999998 56667889999997532 110 1122222 5788999999999999887
Q ss_pred c-------------EEEEeCCCCceE--EeEEecCccCCEEEEEEcCCCCEEEEEECCC----cEEEEEcCCCCceeEEE
Q psy18091 120 T-------------TAVWDKRSGQFE--CNATLEGHENEVKSVTWSKNGQFLATCSRDK----SVWVWEVGEEDEYECAA 180 (377)
Q Consensus 120 ~-------------i~iwd~~~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----~v~~wd~~~~~~~~~~~ 180 (377)
. |++|++.+++.. .......|...+..+.|+|||++++.++.++ .|++|+..... ..
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~--- 265 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FR--- 265 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CE---
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eE---
Confidence 6 999999887632 2233334556789999999999988877666 67777654332 22
Q ss_pred EeeccccceeEEEEeeCCcEEEEee---CCCcEEEEecCcccc-cceeeeecccC-CcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASAS---YDDTVKLFKEDKAEA-DWINFATLKSH-TSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s---~dg~i~~~~~~~~~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
.+..+...+....+ +++.+++... .++.|.+|++..... .|..+ +..+ ...+..++|+ .+.++++...|+.
T Consensus 266 ~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 266 LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEI--VPEDSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEE--ECCCSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEE--ecCCCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 22233344444445 6666444443 257899999865432 12222 1222 4467888888 5678889999999
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe----CCCcEEEEEeCC
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC----GDDAIRIFKENP 321 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~v~~~~~ 321 (377)
.++|.....+. ....+..+....+..++++++++.++... ..+++.+|+...
T Consensus 342 ~~l~~~~~~g~--------------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 342 SEVRVATLKGK--------------PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEEEETTCC--------------EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEeCCCC--------------eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 99996542111 12223322234567788888776555332 235777777544
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.59 E-value=4.7e-13 Score=118.39 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=157.1
Q ss_pred cccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 46 LKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
+..+.....+++|+|+|+ +++++..++.|..|+... . . .. + ..+...+..++++|+|+++++...++.|.+|
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~--~-~--~~-~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG--Q-L--SP-E-MHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS--C-E--EE-E-ESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC--C-e--EE-E-ECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 444556678999999998 788888999999999863 1 1 11 1 2355678999999999988877777899999
Q ss_pred eCCCCceEEeEEe-cC-ccCCEEEEEEcCCCCEEEEEEC-----------------CCcEEEEEcCCCCceeEEEEeecc
Q psy18091 125 DKRSGQFECNATL-EG-HENEVKSVTWSKNGQFLATCSR-----------------DKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 125 d~~~~~~~~~~~~-~~-h~~~v~~l~~~~~~~~l~s~~~-----------------dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
|..+++....... .+ ....+..++++|+|+.+++.+. .+.|..++.. .... ....+
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~---~~~~~ 170 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLS---APIRD 170 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEE---EEECC
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEE---EeecC
Confidence 9988875432211 11 1234668999999998887321 2345555543 2222 23345
Q ss_pred ccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccc-eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCC
Q psy18091 186 IQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADW-INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKP 264 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~ 264 (377)
......++|+|+++.+++.+.++.|.+|++.... .. .....+..+...+..++++++|.++++. ++.|.+|+..
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-- 245 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG-ETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-- 245 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS-CEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT--
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC-cCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC--
Confidence 5567889999999988777888999999986211 11 0011112345566789999999877766 7889999742
Q ss_pred CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEe-cccCCEEEEEeCCC
Q psy18091 265 GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISW-CHLTDLIATACGDD 312 (377)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~d~ 312 (377)
+ .....+..+.. +..++| .++++.|.+++.++
T Consensus 246 g--------------~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 246 G--------------DELGRVLTPQT--TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp S--------------CEEEEEECSSC--CCEEEEESTTSCEEEEEETTE
T ss_pred C--------------CEEEEEECCCC--ceeEEEECCCCCEEEEEcCCe
Confidence 1 12233333322 788888 57778888887764
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.59 E-value=1.3e-12 Score=129.98 Aligned_cols=247 Identities=9% Similarity=0.022 Sum_probs=160.3
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCCC-----cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc-
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGEDK-----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT- 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~- 120 (377)
++|...+..++|||||++||.++.++ +|++||+.+. .... ... .+ ..+..++|+|||+.|+.++.++.
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg--~~~~--~~~-~~-~~~~~~~wspDg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA--KELP--DVL-ER-VKFSCMAWTHDGKGMFYNAYPQQD 194 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT--EEEE--EEE-EE-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCc--ccc-cC-cccceEEEEeCCCEEEEEEECCcc
Confidence 34556788999999999998776554 8999998742 2111 111 11 23667899999999999888766
Q ss_pred ---------------EEEEeCCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEEC-----CCcEEEEEcCC------
Q psy18091 121 ---------------TAVWDKRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSR-----DKSVWVWEVGE------ 172 (377)
Q Consensus 121 ---------------i~iwd~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~~wd~~~------ 172 (377)
|.+|++.+++......+ ..|...+..+.|+|||++++.++. +..|++||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 274 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccC
Confidence 99999988763212222 335566889999999999887764 56899999875
Q ss_pred CC-ceeEEEEeeccccceeEEEEeeCCcEEEEeeCC----CcEEEEecCcccc-cceeeeecccCCc--ceEEEEEcCCC
Q psy18091 173 ED-EYECAAVINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEA-DWINFATLKSHTS--TVWSLAFDRIG 244 (377)
Q Consensus 173 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----g~i~~~~~~~~~~-~~~~~~~~~~h~~--~v~~~~~~~~~ 244 (377)
.. .. ..+..+...+.. .|+|+++.|+..+.. +.|.+|++..... .|. .+..|.. .+..++|++.+
T Consensus 275 ~~~~~---~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 275 GILKW---VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK---VLVPEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SSCCC---EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE---EEECCCSSCEEEEEEEETTT
T ss_pred Cccce---EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce---eccCCCCCCeEEEEEEEcCC
Confidence 32 12 223344444443 488888877666543 3588888865432 222 2334433 67889998777
Q ss_pred CeEEEeeCCCcEEEEeeeC-CCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE-e---CCCcEEEEEe
Q psy18091 245 SRLATCSDDATVKIWKEYK-PGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA-C---GDDAIRIFKE 319 (377)
Q Consensus 245 ~~l~s~s~D~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---~d~~i~v~~~ 319 (377)
.++++...|+..++|.... .+ .....+..+ ...+..++++++++.++.. + ..+.+..|+.
T Consensus 348 ~lv~~~~~~g~~~l~~~~~~~g--------------~~~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 348 FLVLCYLHDVKNTLQLHDLATG--------------ALLKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EEEEEEEETTEEEEEEEETTTC--------------CEEEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEEEEEEECCEEEEEEEECCCC--------------CEEEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 7888999999766664321 11 112334333 3467788888877655433 2 2457777776
Q ss_pred CC
Q psy18091 320 NP 321 (377)
Q Consensus 320 ~~ 321 (377)
..
T Consensus 413 ~t 414 (710)
T 2xdw_A 413 TK 414 (710)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=3.7e-12 Score=114.40 Aligned_cols=241 Identities=10% Similarity=0.008 Sum_probs=157.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC----Cc
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD----AT 120 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d----~~ 120 (377)
.+.++...+.+++|+++|++++++..++.|++||.+. ... ..+ ...+...+.+++++|+|+++++...+ +.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~--~~~--~~~-~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET--KEI--KRP-FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT--CCE--EEE-EECSSSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCC--CcE--EEE-eeCCCCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 4555666789999999999888888999999998763 121 111 12355679999999999988877666 68
Q ss_pred EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccccceeEEEE
Q psy18091 121 TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~ 194 (377)
|.+||..++..........+...+..++++|+|+.+++... .+.|..+|..... ... +......+..+.|
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTP---IIQNISVANGIAL 189 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEE---EEEEESSEEEEEE
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-EEE---eecCCCcccceEE
Confidence 99999888765422111124467899999999988777653 2456556554322 211 1122345778999
Q ss_pred eeCCcEE-EEeeCCCcEEEEecCccccccee-----eeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC
Q psy18091 195 HPFDNIL-ASASYDDTVKLFKEDKAEADWIN-----FATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA 268 (377)
Q Consensus 195 ~~~~~~l-~s~s~dg~i~~~~~~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~ 268 (377)
+|+++.+ ++.+.++.|.+|+.......... ...+.++ ..+..++++++|.++++...++.|.+|+.. . .
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g-~-- 264 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G-Y-- 264 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S-C--
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-C-C--
Confidence 9999855 55566889999998532111110 1112222 357789999999988888888999999741 1 1
Q ss_pred CCCCCCCCCcEEEEEeecCCCC-----cceeEEEecccCCEEEEEeCC
Q psy18091 269 GIPTPDNDSVWKCVCTLSGHHG-----RTIYDISWCHLTDLIATACGD 311 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d 311 (377)
....+..... ..+..++|+++++.|+.++.+
T Consensus 265 ------------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 265 ------------PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ------------EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ------------EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1112221111 157888998887666655554
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=1.9e-13 Score=125.40 Aligned_cols=238 Identities=10% Similarity=0.016 Sum_probs=147.0
Q ss_pred EEECCCCCEEEEEEC-CCc--EEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 103 TAWSPCGNFIASASF-DAT--TAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~-d~~--i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
.+|+|+|++|+.++. ++. |.+||+.+++.. ....++...+..+.|+|||++|+.++.++.|++||+.+.....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-- 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-- 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE--
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee--
Confidence 679999999998887 664 777898888654 3344555555567899999999999999999999998865432
Q ss_pred EEeeccccceeEE--EEeeCCcEEEEe----------------------eCCCcEEEEecCcccccceeeeecccCCcce
Q psy18091 180 AVINAHIQDVKKV--RFHPFDNILASA----------------------SYDDTVKLFKEDKAEADWINFATLKSHTSTV 235 (377)
Q Consensus 180 ~~~~~~~~~v~~~--~~~~~~~~l~s~----------------------s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v 235 (377)
....+...+... .++|++..++.. ..+..|.+|++...+. ..+..+...+
T Consensus 117 -~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~ 190 (388)
T 3pe7_A 117 -VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWL 190 (388)
T ss_dssp -EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCE
T ss_pred -eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccc
Confidence 223333333323 348888887742 2346788888775542 2333456678
Q ss_pred EEEEEcC-CCCeEEEeeCCC------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCCEEEE
Q psy18091 236 WSLAFDR-IGSRLATCSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTDLIAT 307 (377)
Q Consensus 236 ~~~~~~~-~~~~l~s~s~D~------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~ 307 (377)
..++|+| +|+.|+..+.++ .|.+++.... . ...+..+. +..+....|+|+++.|+.
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~---------------~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-N---------------MRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-C---------------CEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-c---------------eEEeeeCCCCcccccceECCCCCEEEE
Confidence 8999999 999888776542 5555553211 1 01122222 235778899999986654
Q ss_pred EeC-CC----cEEEEEeCCCCCCCcceeeeeeecccccee---cceeEEEecCCCCceEE-Ee--------eCCCcEEEE
Q psy18091 308 ACG-DD----AIRIFKENPEAGDSDMVSFDLVHTEHRAHN---QDVNCVAWNPVVPGMLA-SC--------SDDGDVKLW 370 (377)
Q Consensus 308 ~~~-d~----~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~~la-S~--------s~Dg~i~iW 370 (377)
.+. ++ .+.+|+....+.. . +.. ..++. .....++|+|++ ..|+ +. +.+..|++|
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~----~---l~~-~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENR----Q---LTS-MPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEE----E---EEE-ECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEEEE
T ss_pred EecCCCCCcceEEEEecCCCceE----E---EEc-CCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEEEE
Confidence 443 22 2777876543311 0 111 11111 012234789954 4444 32 556789999
Q ss_pred ecccC
Q psy18091 371 QIKLE 375 (377)
Q Consensus 371 d~~~~ 375 (377)
|+...
T Consensus 326 d~~~~ 330 (388)
T 3pe7_A 326 NMKNG 330 (388)
T ss_dssp ETTTT
T ss_pred eccCC
Confidence 98754
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.58 E-value=1.3e-12 Score=119.00 Aligned_cols=266 Identities=12% Similarity=0.061 Sum_probs=159.4
Q ss_pred CCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----------CCcEEEEeCCCCceEEeEEec-
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----------DATTAVWDKRSGQFECNATLE- 138 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----------d~~i~iwd~~~~~~~~~~~~~- 138 (377)
.|++|.+||..+. +.. ..+.. +..+ .++|+|+++++++++. ++.|.+||..+++......+.
T Consensus 29 ~d~~v~v~D~~t~--~~~--~~i~~-g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 29 TESRVHVYDYTNG--KFL--GMVPT-AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp GGCEEEEEETTTC--CEE--EEEEC-CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred ccCeEEEEECCCC--eEE--EEecC-CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 4789999997642 211 12222 2333 7899999999988863 677999999887654332222
Q ss_pred C---ccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEE-eeccccceeEEEEeeCC-cEEEEeeCCCcEE
Q psy18091 139 G---HENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAV-INAHIQDVKKVRFHPFD-NILASASYDDTVK 211 (377)
Q Consensus 139 ~---h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~ 211 (377)
. +......++++|+|++++++.. +++|.+||+.+... ... +.. .....+.+.|.+ ..+++.+.||.+.
T Consensus 102 ~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~---~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~ 176 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY---VEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLL 176 (361)
T ss_dssp TBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE---EEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEE
T ss_pred cccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE---EEEEecC--CCcceeEEcCCCCeeEEEECCCCcEE
Confidence 1 2234667999999999998874 68999999987632 222 221 222335567765 6778889999999
Q ss_pred EEecCcccccceee---eecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec--
Q psy18091 212 LFKEDKAEADWINF---ATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-- 286 (377)
Q Consensus 212 ~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 286 (377)
+++........... ..+..+..++ .+.+.+++..++..+.++.+.++|...... .....+.
T Consensus 177 ~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~-------------~~~~~~~~~ 242 (361)
T 2oiz_A 177 TINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV-------------KVDGPWSLL 242 (361)
T ss_dssp EEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC-------------EEEEEEESC
T ss_pred EEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc-------------eeccccccc
Confidence 98875322110000 1111222222 223356677777777889999998632110 0000000
Q ss_pred C----CC---CcceeEEEecccCCEEEEEeC-----------CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEE
Q psy18091 287 G----HH---GRTIYDISWCHLTDLIATACG-----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCV 348 (377)
Q Consensus 287 ~----~~---~~~v~~~~~~~~~~~l~~~~~-----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v 348 (377)
. +. ......++++++++.++++.. .+.+.+|+....+ ++.+.. .+. +.++
T Consensus 243 ~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---------~v~~i~-~~~--p~~i 310 (361)
T 2oiz_A 243 NDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---------RVARIP-GRD--ALSM 310 (361)
T ss_dssp CHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---------EEEEEE-CTT--CCEE
T ss_pred CccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---------EEEEEe-cCC--eeEE
Confidence 0 00 001112678888777766643 3468888755432 222222 233 8999
Q ss_pred EecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 349 AWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 349 ~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+|+|+ +..|++++. ++|.+||....
T Consensus 311 a~spd-g~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 311 TIDQQ-RNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEETT-TTEEEEECS-SCEEEEECSSS
T ss_pred EECCC-CCEEEEeCC-CeEEEEECCCC
Confidence 99995 556776666 99999998875
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=3.3e-12 Score=112.89 Aligned_cols=233 Identities=11% Similarity=0.052 Sum_probs=151.4
Q ss_pred CcCceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 96 HQRTIRETAWSPCGN-FIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 96 h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
+.....+++|+|+++ .++++..++.|..||..++ .. .+..+...+.+++++|+|+.+++...++.|.+||..+..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~---~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS---PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE---EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE---EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 445677899999998 7778888999999999877 32 344566789999999999988877777899999986653
Q ss_pred ceeEEEEeec-cccceeEEEEeeCCcEEEEe----e-------------CCCcEEEEecCcccccceeeeecccCCcceE
Q psy18091 175 EYECAAVINA-HIQDVKKVRFHPFDNILASA----S-------------YDDTVKLFKEDKAEADWINFATLKSHTSTVW 236 (377)
Q Consensus 175 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~----s-------------~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~ 236 (377)
.......... ....+..++++|+|+++++. + ..+.|..++.. .. +..+..+.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~~ 175 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKPN 175 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEeecCCCCCc
Confidence 2211111111 12346678999999988873 3 12345555543 11 122334555678
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
.++|+|+|+.|++.+.++.|.+|+....+... .....+ ......+..+++.++++++++. ++.|.+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-----------~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~ 241 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETE-----------YQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHV 241 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEE-----------EEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-----------CCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEE
Confidence 99999999988888888999999874211100 001122 1123345678899988877666 788999
Q ss_pred EEeCCCCCCCcceeeeeeeccccceecceeEEEe-cCCCCceEEEeeCCC
Q psy18091 317 FKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAW-NPVVPGMLASCSDDG 365 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~~laS~s~Dg 365 (377)
|+.... . +. ....+.. +++++| .|. +..|..++.++
T Consensus 242 ~~~~g~-----~-----~~-~~~~~~~-~~~~~f~~~d-~~~L~v~t~~~ 278 (296)
T 3e5z_A 242 LTPDGD-----E-----LG-RVLTPQT-TSNLCFGGPE-GRTLYMTVSTE 278 (296)
T ss_dssp ECTTSC-----E-----EE-EEECSSC-CCEEEEESTT-SCEEEEEETTE
T ss_pred ECCCCC-----E-----EE-EEECCCC-ceeEEEECCC-CCEEEEEcCCe
Confidence 964311 0 11 1122344 889999 474 45566666664
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.57 E-value=3.2e-12 Score=115.40 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=144.9
Q ss_pred CCEEEEEECCCCCEEEEEeCC---Cc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-------
Q psy18091 51 GRVWNVSWNPQGTMISSCGED---KN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD------- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D---~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d------- 118 (377)
..+..++|+|||++|+..+.+ +. |.+|+... .. ...+. . +.. +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~--g~--~~~l~-~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLET--LS--SKKIL-E-AKN-IRSLEWNEDSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT--TE--EEEEE-E-ESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC--Cc--eEEEE-c-CCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence 457889999999999887765 34 66666652 11 12222 1 223 8899999999998887643
Q ss_pred --------------------CcEEEEeCCCCce-EEeEEecCccCCEEEEEEcCCCCEEEEEECCC-------cEEEEEc
Q psy18091 119 --------------------ATTAVWDKRSGQF-ECNATLEGHENEVKSVTWSKNGQFLATCSRDK-------SVWVWEV 170 (377)
Q Consensus 119 --------------------~~i~iwd~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg-------~v~~wd~ 170 (377)
..|.+||+.+++. ... .. . .+..+.|+|+| .++++..++ ...+|.+
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l---~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~ 205 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF---EK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIW 205 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEE---EE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeee---cC-C-CcccccCCCCe-EEEEEecccccccccccccEEEe
Confidence 5688899988865 322 22 2 67889999999 877776652 3445544
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCC--------CcEEEEecCcccccceeeeecccCCcceEE-EEEc
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWS-LAFD 241 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d--------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~ 241 (377)
.+ ..... +..+ ..+.. ++|+|+.++.++.+ ..|.+|+ . .+. ......|...+.. +.|+
T Consensus 206 d~-~~~~~---l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~-~~~----~~l~~~~~~~~~~~~~~s 272 (347)
T 2gop_A 206 ED-GKEEK---MFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-G-KEV----MGILDEVDRGVGQAKIKD 272 (347)
T ss_dssp ET-TEEEE---EEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-S-SCE----EESSTTCCSEEEEEEEET
T ss_pred CC-CceEE---eccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC-C-Cce----EeccccCCcccCCccEEc
Confidence 42 22221 2222 33443 39999988877754 3577777 2 221 1223455667886 8999
Q ss_pred CCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcE-EEEEeC
Q psy18091 242 RIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAI-RIFKEN 320 (377)
Q Consensus 242 ~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i-~v~~~~ 320 (377)
++ ++++++.|+.+++| .. .+.. ..+..+ ...|..++|++ .++++++.++.. ++|...
T Consensus 273 -dg-~~~~~~~~~~~~l~-~~-~g~~---------------~~~~~~-~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 273 -GK-VYFTLFEEGSVNLY-IW-DGEI---------------KPIAKG-RHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -TE-EEEEEEETTEEEEE-EE-SSSE---------------EEEECS-SSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -Cc-EEEEEecCCcEEEE-Ec-CCce---------------EEEecC-CCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 88 88999999999999 75 2210 112222 45788999998 777887777766 888764
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=2e-12 Score=117.90 Aligned_cols=274 Identities=13% Similarity=0.121 Sum_probs=167.2
Q ss_pred ccccccCCEEEEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeecc---CcCceeEEEECCCCCE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDG---HQRTIRETAWSPCGNF 111 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~---h~~~V~~~~~~~~~~~ 111 (377)
++..+.++ .++|+|||++++++. .+++|.+||..+.. .........+ +......++++|+|++
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCccccccCCCcceEEECCCCCE
Confidence 44555555 899999999998886 36789999986421 1111111111 2234567899999999
Q ss_pred EEEEEC--CCcEEEEeCCCCceEEeEE-ecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEE----Eee
Q psy18091 112 IASASF--DATTAVWDKRSGQFECNAT-LEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAA----VIN 183 (377)
Q Consensus 112 l~s~s~--d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~----~~~ 183 (377)
|+++.. ++.|.+||+.+++.. .. +. + .....+.+.|++ ..+++.+.||.+.+|++.......... .+.
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~--~~~i~-~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~ 197 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYV--EDVTA-A-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS 197 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEE--EEEGG-G-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC
T ss_pred EEEECCCCCCeEEEEECCCCcEE--EEEec-C-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEc
Confidence 998874 588999999988543 33 32 1 122335667765 678889999999999986533322110 111
Q ss_pred ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeeccc----CC----cceEEEEEcCCCCeEEEeeC---
Q psy18091 184 AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKS----HT----STVWSLAFDRIGSRLATCSD--- 252 (377)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~----h~----~~v~~~~~~~~~~~l~s~s~--- 252 (377)
....++ .+.++|++..++..+.++.+.++|+............... +. .....++|+|+++++..+..
T Consensus 198 ~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 198 VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 111221 2334677777777778899999997643221110000000 00 11112689999887665432
Q ss_pred --------CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCC
Q psy18091 253 --------DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 324 (377)
Q Consensus 253 --------D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~ 324 (377)
++.|.+||... .+.+.++..+. ...++++|++++|++++. +.+.+|+......
T Consensus 277 ~~~~~~~~~~~v~viD~~t---------------~~~v~~i~~~~---p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l 337 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKT---------------KQRVARIPGRD---ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP 337 (361)
T ss_dssp CTTCTTCCCSEEEEEETTT---------------TEEEEEEECTT---CCEEEEETTTTEEEEECS-SCEEEEECSSSSC
T ss_pred CcccccCCCceEEEEECCC---------------CcEEEEEecCC---eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc
Confidence 34799998532 13455565543 899999999999998887 9999998654310
Q ss_pred CCcceeeeeeeccccceecceeEEEecCCC
Q psy18091 325 DSDMVSFDLVHTEHRAHNQDVNCVAWNPVV 354 (377)
Q Consensus 325 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 354 (377)
+++.+. ..+......++++|++
T Consensus 338 -------~~~~~i-~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 338 -------KLLRTI-EGAAEASLQVQFHPVG 359 (361)
T ss_dssp -------EEEEEE-TTSCSSEEEEEECCCS
T ss_pred -------eeeEEe-ccCCCCcEEEEecCCC
Confidence 122221 1233456778899853
No 187
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=5e-12 Score=109.91 Aligned_cols=238 Identities=11% Similarity=0.046 Sum_probs=162.5
Q ss_pred CEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 52 RVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
...+++++++|++.+ +.+.++.|..|+.... .. . .....+...+..++++++++.+++.. ++.|.+||...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~--~~--~-~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST--GT--T-VLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------E-ECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc--cc--c-eEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 678999999999777 6578899999986521 11 1 11123335678899999998666655 8899999987654
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
.... .......+..+++.++|+.+++...++.|.+|+........ ........+..++++++++++++...++.|
T Consensus 99 ~~~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 99 QTVL--PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV---LPFTGLNDPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp CEEC--CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---CCCCSCCSCCCEEECTTCCEEEEEGGGTEE
T ss_pred Eeee--ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---eccccCCCceeEEEeCCCCEEEEECCCCEE
Confidence 3211 11223578999999999987777778899999765432211 112223457789999999988888888999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..|+....... .....+...+..++++++|.++++...++.|.+|+...... ........
T Consensus 174 ~~~~~~~~~~~----~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~----------------~~~~~~~~ 233 (270)
T 1rwi_B 174 VKLEAESNNQV----VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS----------------TVLPFTGL 233 (270)
T ss_dssp EEECTTTCCEE----ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC----------------EECCCCSC
T ss_pred EEEecCCCceE----eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc----------------eeeccCCC
Confidence 99997643321 11122335688999999998888887888999997532110 00111112
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
..+..+++.++++++++...++.|++++..
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 357889999988988888999999999653
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=3.8e-12 Score=127.14 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=170.4
Q ss_pred CCCCCEEEEEeCCCc---EEEeecccC---CCcccceee-----eeccCcCceeEEEECCCCCEEEEEECC-----CcEE
Q psy18091 59 NPQGTMISSCGEDKN---IRLWGKESF---GNKFTAKAI-----LSDGHQRTIRETAWSPCGNFIASASFD-----ATTA 122 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~---v~~W~~~~~---~~~~~~~~~-----~~~~h~~~V~~~~~~~~~~~l~s~s~d-----~~i~ 122 (377)
.|+|++++-...++. -.+|..... +.. .+.+ +..+|...+...+|||+|++|+.++.+ ..|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTK--GRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCC--CEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCC--CEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 389998876665543 667765432 111 1221 123344467889999999999876543 3599
Q ss_pred EEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc--------------EEEEEcCCCCce-eEEEEeecccc
Q psy18091 123 VWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS--------------VWVWEVGEEDEY-ECAAVINAHIQ 187 (377)
Q Consensus 123 iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~--------------v~~wd~~~~~~~-~~~~~~~~~~~ 187 (377)
+||+.+++.... .+. ...+..++|+|| +.|+.++.++. |++|++.+.... ........+..
T Consensus 193 v~dl~tg~~~~~-~~~--~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 193 FVGVADGKPLAD-ELK--WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EEETTTCCEEEE-EEE--EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EEECCCCCCCCc-cCC--CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 999999875432 111 112357899999 98888877654 889998765421 11111112223
Q ss_pred ceeEEEEeeCCcEEEEeeCCC-----cEEEEecCccccc-ceeeeecccCCcceEEEEEcCCCCeEEEeeCCC----cEE
Q psy18091 188 DVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEAD-WINFATLKSHTSTVWSLAFDRIGSRLATCSDDA----TVK 257 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~----~i~ 257 (377)
.+..+.|+|+|++++..+.++ .|.+|++..+... + ..+..+...+.... +++|..|+..+.++ .|.
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV---TALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC---EEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc---EEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence 477899999999888777544 7888888654222 2 22333443444443 48898888777643 488
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+|+...+. ..+ ..+..++...+..+++. .+.++++...|+..++|....... . ....
T Consensus 345 ~~d~~~~~-----------~~~---~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~----~----~~~l 401 (741)
T 1yr2_A 345 RVDLSGST-----------PRF---DTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGK----P----AGAV 401 (741)
T ss_dssp EEECSSSS-----------CEE---EEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSC----E----EEEC
T ss_pred EEeCCCCc-----------ccc---EEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC----c----eeec
Confidence 88753221 011 12223334456677776 456888888999999987653211 0 1111
Q ss_pred ccceecceeEEEecCCCCceEEE---eeCCCcEEEEecccC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLAS---CSDDGDVKLWQIKLE 375 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS---~s~Dg~i~iWd~~~~ 375 (377)
...+...|..++++|++..++++ ....++|++||+...
T Consensus 402 ~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 402 SLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp BCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred cCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 11124568889999954444433 345688999998653
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=8.9e-12 Score=108.29 Aligned_cols=241 Identities=9% Similarity=-0.015 Sum_probs=159.9
Q ss_pred ceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 99 TIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
...+++++++|+.++ +...++.|.+||..++..... ...+...+.++++.++++.+++.. ++.|..||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--PFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC--CCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE--eeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence 567889999998777 546788999999765543211 122335678899999998666554 889999997654321
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.........+..++++|+++++++...++.|..|+....... .........+..++++++|.++++...++.|.
T Consensus 101 --~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~----~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 101 --VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT----VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp --ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE----ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred --eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE----eeccccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 111122356788999999998888888899999975432211 11112233567899999999888887788999
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
+|+...... ...... ....+..+++.+++.++++...++.+.+|+...... . ..
T Consensus 175 ~~~~~~~~~---------------~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~----~------~~ 228 (270)
T 1rwi_B 175 KLEAESNNQ---------------VVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS----T------VL 228 (270)
T ss_dssp EECTTTCCE---------------EECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC----E------EC
T ss_pred EEecCCCce---------------Eeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc----e------ee
Confidence 997432110 000011 113567889999888888877889999997543210 0 01
Q ss_pred ccceecceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
...+...+.+++++|. +.++++.+.++.|+++++..++
T Consensus 229 ~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSD-RTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCSCSCEEEEEECTT-CCEEEEEGGGTEEEEECCCGGG
T ss_pred ccCCCCCceeEEECCC-CCEEEEECCCCEEEEEcCCCcc
Confidence 1123356889999995 5688899999999999987653
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.49 E-value=8.4e-10 Score=96.98 Aligned_cols=281 Identities=8% Similarity=0.050 Sum_probs=185.2
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
......+++++++|.+.++...++.|..|+.. + ... ......+...+..++++++++..++...++.|..||..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~--~-~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS--G-RIK--EFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT--S-CEE--EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC--C-ceE--EEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 44678999999999988888788999999865 1 121 11112334578899999999887776667889999987
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
++.. ..........+..+++.++++.+++...++.|..+|.. .. ... .........+..+.+.++++++++...++
T Consensus 92 g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 92 GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT-IYE-YDLPNKGSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEE-EECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC-EEE-ccCCCCCCCceeEEECCCCCEEEEecCCC
Confidence 6543 22333344678999999999888877768889999876 32 221 11222345678899999999877777788
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCC
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGH 288 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (377)
.|..++.. ... .. .....+...+..++++++|..+++....+.|.+|+.. +. ... .....
T Consensus 168 ~i~~~~~~-g~~--~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~------------~~~-~~~~~- 227 (300)
T 2qc5_A 168 SIGRITNT-GKL--EE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT--GE------------ISE-YDIPT- 227 (300)
T ss_dssp EEEEECTT-CCE--EE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CC------------EEE-EECSS-
T ss_pred eEEEECCC-CcE--EE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC--Cc------------EEE-EECCC-
Confidence 89999873 221 11 1222344568899999999877777777789888741 11 000 11111
Q ss_pred CCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 289 HGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 289 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
....+..+.+.++++++++...++.+..|+... ....+.+ ......+.++++.|. +.++++.. . .|.
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~-----~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~ 294 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITNDN-----TIQEYQL-----QTENAEPHGITFGKD-GSVWFALK-C-KIG 294 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-----CEEEEEC-----CSTTCCCCCEEECTT-SCEEEECS-S-EEE
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECCCC-----cEEEEEC-----CccCCccceeEeCCC-CCEEEEcc-C-ceE
Confidence 234577888988888777776778898886521 1111111 112345788999985 55655554 4 555
Q ss_pred EEec
Q psy18091 369 LWQI 372 (377)
Q Consensus 369 iWd~ 372 (377)
.+|.
T Consensus 295 ~~~p 298 (300)
T 2qc5_A 295 KLNL 298 (300)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 5554
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=5.6e-10 Score=107.27 Aligned_cols=307 Identities=12% Similarity=0.096 Sum_probs=188.2
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEEC----CCCCEEEEEEC-CCcEEEEeC
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS----PCGNFIASASF-DATTAVWDK 126 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~----~~~~~l~s~s~-d~~i~iwd~ 126 (377)
.+..+.|+|||+++++++.|+.|.+||......... ..+..+ ..-..++|+ |+|+++++++. ++.+.++|.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 567899999999999999999999999841111111 112222 235788999 69998877655 599999998
Q ss_pred CCCceEEeEEecC--------ccC-CEEEEEEcCCCC-EEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 127 RSGQFECNATLEG--------HEN-EVKSVTWSKNGQ-FLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 127 ~~~~~~~~~~~~~--------h~~-~v~~l~~~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
.+.+........+ |.. .+..+..++++. ++++...+|.|.++|.......... .+. .......+.|+|
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~-~i~-~~~~~~d~~~~p 351 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT-EIS-AERFLHDGGLDG 351 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEE-EEE-CCSSEEEEEECT
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceee-eee-ccccccCceECC
Confidence 8876543322211 222 678888888765 4556667799999998765433322 222 223456788999
Q ss_pred CCcEEEEee-CCCcEEEEecCcccccceeee-ecccCCcceEEEEEcCCC-CeEEEee-CCCcEEEEeeeCCCCCCCCCC
Q psy18091 197 FDNILASAS-YDDTVKLFKEDKAEADWINFA-TLKSHTSTVWSLAFDRIG-SRLATCS-DDATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 197 ~~~~l~s~s-~dg~i~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~-~~l~s~s-~D~~i~iw~~~~~~~~~~~~~ 272 (377)
++++++++. .++.|.++|............ ....|.+.--.+ ++|++ ..++++. .+++|.+++....+.
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~------ 424 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGH------ 424 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC------
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCC------
Confidence 999876655 678899999876543111101 123454322222 57874 4555553 568999998643211
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC-------CCcEEEEEeCCCC--CCCcceeeeeee-cc---cc
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG-------DDAIRIFKENPEA--GDSDMVSFDLVH-TE---HR 339 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~v~~~~~~~--~~~~~~~~~~~~-~~---~~ 339 (377)
....|+.+.++... +..-..+..+|+++.+.+... .++|.+|+....+ +.. ..+..+. .. ..
T Consensus 425 --~~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~--~~~~~~~~~~~~~~~ 499 (567)
T 1qks_A 425 --PDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD--PEFKTLPIAEWAGIT 499 (567)
T ss_dssp --TTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC--CCEEEECHHHHHTCC
T ss_pred --ccccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccC--CCcEEeccccccccC
Confidence 11224444555432 222344667888888877663 4599999976541 111 0111111 00 00
Q ss_pred ceecceeEEEecCCCCceEEEee----CCCcEEEEecccCC
Q psy18091 340 AHNQDVNCVAWNPVVPGMLASCS----DDGDVKLWQIKLEN 376 (377)
Q Consensus 340 ~h~~~v~~v~~~p~~~~~laS~s----~Dg~i~iWd~~~~~ 376 (377)
.-...+..++|+|.+..+++|.. .++.|.+.|.++.+
T Consensus 500 ~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 500 EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 01246888999997666777743 47999999987654
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.46 E-value=8.7e-13 Score=121.16 Aligned_cols=235 Identities=9% Similarity=0.010 Sum_probs=142.5
Q ss_pred eeEEEECCCCCEEEEEECC---CcEEEEeCCCCceEEeEEecCccCC-EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 100 IRETAWSPCGNFIASASFD---ATTAVWDKRSGQFECNATLEGHENE-VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
+..++|+|+|++|+..... ..+.+||+.+++... +..+... ...+.|+|+|++|+.++.++.|++||+.....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ---LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE---CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE---eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6677899999998876543 367888988876432 2222233 23378999999999999999999999977643
Q ss_pred eeEEEEeeccccceeE-------------------EEEeeCCcEEEEe-----eCCCcEEEEecCcccccceeeeecccC
Q psy18091 176 YECAAVINAHIQDVKK-------------------VRFHPFDNILASA-----SYDDTVKLFKEDKAEADWINFATLKSH 231 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~s~-----s~dg~i~~~~~~~~~~~~~~~~~~~~h 231 (377)
.. ....+...... +.++|+++.++.+ ..+..|.+|++..... ..+..+
T Consensus 115 ~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~~~~~ 186 (396)
T 3c5m_A 115 QV---IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL-----EVIHQD 186 (396)
T ss_dssp EE---EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE-----EEEEEE
T ss_pred EE---EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE-----EeeccC
Confidence 22 12212111111 2356666655544 3556788888865442 122245
Q ss_pred CcceEEEEEcC-CCCeEEEeeCCC------cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC-CcceeEEEecccCC
Q psy18091 232 TSTVWSLAFDR-IGSRLATCSDDA------TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH-GRTIYDISWCHLTD 303 (377)
Q Consensus 232 ~~~v~~~~~~~-~~~~l~s~s~D~------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 303 (377)
...+..+.|+| ++..|+..+.++ .|.+|+.... .. ..+..+. ...+..+.|+|+++
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~---------------~~l~~~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS-NV---------------RKIKEHAEGESCTHEFWIPDGS 250 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC-CC---------------EESSCCCTTEEEEEEEECTTSS
T ss_pred CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC-ce---------------eEeeccCCCccccceEECCCCC
Confidence 66788999999 788777665443 4666664211 10 1111111 23577889999998
Q ss_pred EEEEEeCC-----CcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC-CCCceEEEee---------------
Q psy18091 304 LIATACGD-----DAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP-VVPGMLASCS--------------- 362 (377)
Q Consensus 304 ~l~~~~~d-----~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~laS~s--------------- 362 (377)
.|+.++.+ +.+.+|+....+. .. +.. ..+ .. ++|+| ++ ..++.++
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~----~~---l~~-~~~----~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLEN----EE---VMV-MPP----CS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCE----EE---EEE-CCS----EE-EEEECSSS-SEEEEEECCC----------CC
T ss_pred EEEEEecCCCCccceEEEEECCCCCe----EE---eee-CCC----CC-CCccCCCC-ceEEEecCCcceeecccccccc
Confidence 77666543 3388887543321 00 111 111 22 78998 64 4666544
Q ss_pred -CCCcEEEEecccC
Q psy18091 363 -DDGDVKLWQIKLE 375 (377)
Q Consensus 363 -~Dg~i~iWd~~~~ 375 (377)
.++.|++||+...
T Consensus 317 ~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 317 ENDPFLYVLNTKAK 330 (396)
T ss_dssp CCCCEEEEEETTTT
T ss_pred CCCCcEEEEecccC
Confidence 3478999998754
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.44 E-value=3.3e-11 Score=120.33 Aligned_cols=249 Identities=10% Similarity=0.023 Sum_probs=151.6
Q ss_pred ccccCCEEEEEECCCCCEEEEEeCC-----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCc-
Q psy18091 47 KGHQGRVWNVSWNPQGTMISSCGED-----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDAT- 120 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~s~s~D-----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~- 120 (377)
++|...+..++|+|||++||.++.+ .+|++||+++. ..... . .+...+..++|+|+ +.|+.++.++.
T Consensus 159 ~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg--~~~~~-~---~~~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 159 KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG--KPLAD-E---LKWVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp ----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC--CEEEE-E---EEEEESCCCEESTT-SEEEEEECCCC-
T ss_pred cCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC--CCCCc-c---CCCceeccEEEECC-CEEEEEEecCcc
Confidence 3444578899999999999877654 46999998742 21111 1 11112356789999 99888877654
Q ss_pred -------------EEEEeCCCCceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCC-----cEEEEEcCCCCceeEEE
Q psy18091 121 -------------TAVWDKRSGQFECNATLE--GHENEVKSVTWSKNGQFLATCSRDK-----SVWVWEVGEEDEYECAA 180 (377)
Q Consensus 121 -------------i~iwd~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~ 180 (377)
|.+|++.+++......+. .+...+..+.|+|||++++..+.++ .|++||+.+... .+..
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~ 310 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVT 310 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCE
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccE
Confidence 888998776532122232 3334588999999999988777544 899999876521 0011
Q ss_pred EeeccccceeEEEEeeCCcEEEEeeCC----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 181 VINAHIQDVKKVRFHPFDNILASASYD----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~s~s~d----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..+....... ++|+++.|+..+.+ +.|.+|++......+..+ +..+...+..++|+ .+.++++...|+..
T Consensus 311 ~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l--~~~~~~~l~~~~~~-~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 311 ALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV--VPESKDNLESVGIA-GNRLFASYIHDAKS 386 (741)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE--ECCCSSEEEEEEEE-BTEEEEEEEETTEE
T ss_pred EecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE--ecCCCCeEEEEEEE-CCEEEEEEEECCEE
Confidence 223333333333 45888888777653 458888876532122222 23344456677777 45677888999999
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEE-EEe---CCCcEEEEEeCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA-TAC---GDDAIRIFKENP 321 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~---~d~~i~v~~~~~ 321 (377)
++|.....+. ....+.......+..++++++++.++ +.+ ..+++.+|+...
T Consensus 387 ~l~~~~~~g~--------------~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGK--------------PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSC--------------EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEeCCCC--------------ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 9886532111 12223322234678888888776444 332 246777777543
No 194
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.42 E-value=3e-12 Score=116.44 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=130.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCC-------CcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFG-------NKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~-------~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iw 124 (377)
+++.+++++...++++|+.|+ +++|+.+... ..+.... ...+.. |+.++| ++++|+++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~--~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW--EKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE--EEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceE--EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 689999999999999999985 6669865321 0011111 123556 999999 89999998 88999999
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
|+.+... ......|..++.++.+.+. .++++..||.|.+||++...... +...|++++|+|.| ++.|
T Consensus 112 dv~sl~~--~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 112 DLEELSE--FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp ESSSTTC--EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEE
T ss_pred Echhhhc--cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEE
Confidence 9876542 2234456778888877654 38889999999999998664321 34579999999999 7889
Q ss_pred eCCCcEEEEecCcccccceeeeec------c---cCCcceEEEEEcCCCCeEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATL------K---SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~l~s~s 251 (377)
..||.+++|+........ ...+ . +|...|.++.|.+++.+|++-+
T Consensus 179 ~~dg~i~~~~~~~~~~~~--k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEK--QFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEE--EEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccc--cceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999999999775443100 1111 2 4778899999999998888754
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.42 E-value=1.7e-09 Score=94.88 Aligned_cols=242 Identities=9% Similarity=-0.014 Sum_probs=164.0
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
+...+.+++++++|+..++...++.|.+||.. ++... .....+...+.++++.++|+.+++...++.|..||... .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG--I 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS--C
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC--c
Confidence 44578999999999987776667899999988 65432 22333456799999999999888877788899998752 2
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
.... ........+..+.+++++.++++...++.|..|+.. ... .. .....+...+..++++++|..+++...++.
T Consensus 89 ~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~--~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 89 IKEY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD-GKI--RE-YELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp EEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE--EE-EECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred EEEE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC-CCE--EE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 2211 122234568889999999988888888899999873 221 11 112234456889999999988887777788
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
|..|+. .. .. ... .... ....+..+.+.+++.++++...++.+.+|+. ... .....
T Consensus 164 i~~~~~-~g-~~------------~~~-~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~----~~~~~--- 219 (299)
T 2z2n_A 164 IGRITE-SG-DI------------TEF-KIPT-PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE----ITEFK--- 219 (299)
T ss_dssp EEEECT-TC-CE------------EEE-ECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC----EEEEE---
T ss_pred EEEEcC-CC-cE------------EEe-eCCC-CCCcceeEEECCCCCEEEEccCCceEEEECC-CCc----EEEEE---
Confidence 988874 11 10 000 1111 2335778888888887777777888888865 221 11110
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+...+.+++++|. +.++++...++.|..||..
T Consensus 220 --~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 220 --IPTPNARPHAITAGAG-IDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp --CSSTTCCEEEEEECST-TCEEEEETTTTEEEEEETT
T ss_pred --CCCCCCCceeEEECCC-CCEEEeccCCceEEEECCC
Confidence 1123456889999995 5677776677889999863
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.41 E-value=1.3e-10 Score=104.38 Aligned_cols=263 Identities=6% Similarity=-0.035 Sum_probs=162.8
Q ss_pred CCCcEEEeecccCCCcccceeeee----ccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEE
Q psy18091 70 EDKNIRLWGKESFGNKFTAKAILS----DGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVK 145 (377)
Q Consensus 70 ~D~~v~~W~~~~~~~~~~~~~~~~----~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~ 145 (377)
.+++|.++|.++. ..... +.. .........+.+. .++..++...++.|.+||..+++.... +. ......
T Consensus 15 ~~~~l~~~d~~t~--~~~~~-i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~--i~-~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATC--EVENE-VFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGR--IT-GFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTT--EEECS-HHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEE--EE-CCSSEE
T ss_pred CCceEEEEECCCC--EEhhh-hHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEE--cC-CCCCCc
Confidence 4789999998742 11110 000 0112345667764 345555566679999999998875432 32 346788
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccc-----cceeEEEEeeCCcEEEEee-CCCcEEEEecCccc
Q psy18091 146 SVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHI-----QDVKKVRFHPFDNILASAS-YDDTVKLFKEDKAE 219 (377)
Q Consensus 146 ~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s-~dg~i~~~~~~~~~ 219 (377)
.++++++++.+++...++.|.+||..+.... ..+.... .....+.+ ..+.++++.. .++.|.++|.....
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~---~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEIT---GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEE---EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEE---EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 9999988854444448899999999876422 2222221 13445666 4555555554 48899999987544
Q ss_pred ccceeeeecccCCcceEEEEEcCCCCeEEEeeCC----------CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD----------ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH 289 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (377)
.. ..+.. ......++++++|++++++..+ +.|.++|.... +....+.-..
T Consensus 164 ~~----~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------------~v~~~~~~~~ 223 (328)
T 3dsm_A 164 VV----DELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF---------------TVEKQFKFKL 223 (328)
T ss_dssp EE----EEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT---------------EEEEEEECCT
T ss_pred EE----EEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC---------------eEEEEEecCC
Confidence 21 11211 2234578899999988877655 78999985311 1122222111
Q ss_pred CcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEe----eCCC
Q psy18091 290 GRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASC----SDDG 365 (377)
Q Consensus 290 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~----s~Dg 365 (377)
+.....++++|+++.+.++.. .+.+|+....+... . .....+......++++|.++.++++. ..++
T Consensus 224 g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~----~----~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV----R----PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS----S----CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEE
T ss_pred CCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee----e----eeecCCCCceEEEEEcCCCCeEEEEcccccccCC
Confidence 336788999999888887765 78888765433110 0 00011134678899999667788887 7889
Q ss_pred cEEEEecc
Q psy18091 366 DVKLWQIK 373 (377)
Q Consensus 366 ~i~iWd~~ 373 (377)
.|.+||..
T Consensus 294 ~V~v~d~~ 301 (328)
T 3dsm_A 294 IVYRYSPQ 301 (328)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 99999987
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=2.9e-10 Score=100.88 Aligned_cols=250 Identities=11% Similarity=0.127 Sum_probs=157.1
Q ss_pred CceeEEEECCCCCEEEE-------EECCCcEEEEeCCCCceEEeEE--ecCccCCEEEEEEcCC-CCEEEEEECCCcEEE
Q psy18091 98 RTIRETAWSPCGNFIAS-------ASFDATTAVWDKRSGQFECNAT--LEGHENEVKSVTWSKN-GQFLATCSRDKSVWV 167 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s-------~s~d~~i~iwd~~~~~~~~~~~--~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~ 167 (377)
....+++|+++++.+++ ...++.|.+||..+++...... ..++...+.+++++++ ++.+++. ..+.|..
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-TTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-CCCCEEE
Confidence 45678899999988877 5678899999988876542211 1124567899999999 6655544 4457999
Q ss_pred EEcCCCCceeEE-EEe--eccccceeEEEEeeCCcEEEEeeCC---------------CcEEEEecCcccccceeeeecc
Q psy18091 168 WEVGEEDEYECA-AVI--NAHIQDVKKVRFHPFDNILASASYD---------------DTVKLFKEDKAEADWINFATLK 229 (377)
Q Consensus 168 wd~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~l~s~s~d---------------g~i~~~~~~~~~~~~~~~~~~~ 229 (377)
||.. .. .... ... ......+..+.++++++++++...+ +.|..++.. ... ..+.
T Consensus 97 ~d~~-g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-----~~~~ 168 (314)
T 1pjx_A 97 VQTD-GT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-----IQVD 168 (314)
T ss_dssp EETT-SC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-----EEEE
T ss_pred EeCC-CC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-----EEec
Confidence 9987 32 2111 000 0112347889999999888877665 456666654 211 1112
Q ss_pred cCCcceEEEEEc----CCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCE
Q psy18091 230 SHTSTVWSLAFD----RIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDL 304 (377)
Q Consensus 230 ~h~~~v~~~~~~----~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 304 (377)
.+......++|+ ++++.+ ++...++.|.+|+....+.. ........+.++.......+.+.+++++
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~---------~~~~~~~~~~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKI---------ENKKVWGHIPGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEE---------EEEEEEEECCCCSSCEEEEEEEBTTCCE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcc---------ccceEEEECCCCCCCCCCceEECCCCCE
Confidence 233346788999 998654 55567889999986421110 0001122233221135677889998888
Q ss_pred EEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 305 IATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 305 l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
+++...++.|.+|+....+. ... ...+...+.+++|+|++..++++...++.|..|++...
T Consensus 240 ~v~~~~~~~i~~~d~~~g~~---~~~-------~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPDGGQP---KMR-------IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEETTTEEEEECTTCBSC---SEE-------EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCEEEEEcCCCCcE---eEE-------EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 88888889999996542210 011 11234578999999954336677777889999998653
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.37 E-value=5.1e-10 Score=99.28 Aligned_cols=243 Identities=9% Similarity=0.058 Sum_probs=154.6
Q ss_pred CCEEEEEECCCCCEEEE-------EeCCCcEEEeecccCCCcccceeeee---ccCcCceeEEEECCC-CCEEEEEECCC
Q psy18091 51 GRVWNVSWNPQGTMISS-------CGEDKNIRLWGKESFGNKFTAKAILS---DGHQRTIRETAWSPC-GNFIASASFDA 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s-------~s~D~~v~~W~~~~~~~~~~~~~~~~---~~h~~~V~~~~~~~~-~~~l~s~s~d~ 119 (377)
....+++|+++|.++++ +..++.|..|+..+. ... .+.. .++...+..++++++ ++++++. .++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g--~~~--~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-~~~ 92 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG--KKT--VICKPEVNGYGGIPAGCQCDRDANQLFVAD-MRL 92 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTC--CEE--EEECCEETTEECCEEEEEECSSSSEEEEEE-TTT
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCC--cEE--EEEecccCCCCCCCceEEEecCCCcEEEEE-CCC
Confidence 45678999999998888 678899999986532 211 1111 124467889999999 6655544 445
Q ss_pred cEEEEeCCCCceEEe-EEec--CccCCEEEEEEcCCCCEEEEEECC---------------CcEEEEEcCCCCceeEEEE
Q psy18091 120 TTAVWDKRSGQFECN-ATLE--GHENEVKSVTWSKNGQFLATCSRD---------------KSVWVWEVGEEDEYECAAV 181 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~-~~~~--~h~~~v~~l~~~~~~~~l~s~~~d---------------g~v~~wd~~~~~~~~~~~~ 181 (377)
.|.+||.. ++.... .... .....+.++++.++|+.+++...+ +.|..||.. .....
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~--- 166 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMIQ--- 166 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEEE---
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCEEE---
Confidence 78899988 665322 1111 112457899999999887777654 456666654 22221
Q ss_pred eeccccceeEEEEe----eCCcEE-EEeeCCCcEEEEecCc-ccc-cceeeeecccCC-cceEEEEEcCCCCeEEEeeCC
Q psy18091 182 INAHIQDVKKVRFH----PFDNIL-ASASYDDTVKLFKEDK-AEA-DWINFATLKSHT-STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 182 ~~~~~~~v~~~~~~----~~~~~l-~s~s~dg~i~~~~~~~-~~~-~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D 253 (377)
...+......+.++ |+++.+ ++...++.|.+|+... ... ....+..+..+. ..+..++++++|.++++...+
T Consensus 167 ~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 167 VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 12233446788999 998654 5556788999998652 111 001122333443 567889999999988888888
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEeCCCcEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATACGDDAIRIFKEN 320 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~~~~ 320 (377)
+.|.+|+...... ...+.. ....+..++++++++ ++++...++.+..|+..
T Consensus 247 ~~i~~~d~~~g~~---------------~~~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 247 SHIEVFGPDGGQP---------------KMRIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TEEEEECTTCBSC---------------SEEEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CEEEEEcCCCCcE---------------eEEEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 9999997431110 011111 124678899999888 44555566788888754
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.32 E-value=9e-10 Score=96.27 Aligned_cols=184 Identities=12% Similarity=0.101 Sum_probs=128.1
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc-CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ-RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
.+++|++++.|+.|.+||.++....+. +. .+. ..+.++++.|+|++++ +.++.+..||. +|+.... +..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~----~~-~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~--~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE----YP-LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN--IAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE----EE-CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE--EEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE----eC-CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE--EcC
Confidence 468999999999999999864221111 11 222 4678899999999888 45788999998 7765433 333
Q ss_pred c-cCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEe---eccccceeEEEEeeCCcEEEEeeCCCcEEEEe
Q psy18091 140 H-ENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYECAAVI---NAHIQDVKKVRFHPFDNILASASYDDTVKLFK 214 (377)
Q Consensus 140 h-~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~ 214 (377)
+ ...+.++.+.|+|+.+++.+. ++.+..+|.. .+.+...... ..+......+.+.++++++++...++.|..||
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEEC
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEEC
Confidence 3 347889999999999999887 7777777653 3222221111 11223345567889999999999999999999
Q ss_pred cCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 215 EDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 215 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
.. .+..|.. ... ....++.+.++|..+++++.++.|..+|.
T Consensus 153 ~~-G~~~w~~----~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 153 PN-GQLLNSV----KLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp TT-SCEEEEE----ECS-SCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CC-CCEEEEE----ECC-CCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 87 5544432 112 23456777899999999998888888874
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.30 E-value=1e-08 Score=98.46 Aligned_cols=288 Identities=11% Similarity=0.122 Sum_probs=171.0
Q ss_pred CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC--CCceEEeEE
Q psy18091 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR--SGQFECNAT 136 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~ 136 (377)
+|.+.++++...+++|.++|..+. ... ..+. ....+..++|+|+|+++++++.|+.|.+||+. +++.. ..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~--~v~--~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~ 235 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTY--EIK--TVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AE 235 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--CEE--EEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EE
T ss_pred CCCceEEEEeCCCCeEEEEECCCC--eEE--EEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EE
Confidence 345567888889999999998742 111 1122 22356688999999999999999999999995 55443 33
Q ss_pred ecCccCCEEEEEEc----CCCCEEEEEEC-CCcEEEEEcCCCCceeEEEEeec-------ccc-ceeEEEEeeCCc-EEE
Q psy18091 137 LEGHENEVKSVTWS----KNGQFLATCSR-DKSVWVWEVGEEDEYECAAVINA-------HIQ-DVKKVRFHPFDN-ILA 202 (377)
Q Consensus 137 ~~~h~~~v~~l~~~----~~~~~l~s~~~-dg~v~~wd~~~~~~~~~~~~~~~-------~~~-~v~~~~~~~~~~-~l~ 202 (377)
+.. ......++|+ |||+++++++. +++|.++|..+.+.......... |.. .+..+..++++. +++
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 332 2346799999 69998776654 58999999877654432221110 112 466777788765 445
Q ss_pred EeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCCCCCCCCCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSAGIPTPDNDSVWKC 281 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 281 (377)
....+|.|.++|...... .....+ ........+.|+|+|++|+++. .++.|.++|+..... ...
T Consensus 315 ~~~~~g~v~~vd~~~~~~--~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl------------~~~ 379 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNN--LKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL------------VAI 379 (567)
T ss_dssp EETTTTEEEEEETTCSSE--EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE------------EEE
T ss_pred EecCCCeEEEEecCCCcc--ceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE------------EEE
Confidence 556679999998764321 111111 2234566889999999876544 678999998642210 001
Q ss_pred EEe--ecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCce
Q psy18091 282 VCT--LSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGM 357 (377)
Q Consensus 282 ~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 357 (377)
+.+ -..|-++.+. + +.|+.+ +++++. +++.|.+++..+.... ...++.+.+.... ...-.-+..+|++..+
T Consensus 380 i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~--~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l 454 (567)
T 1qks_A 380 EDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEGHP--DNAWKILDSFPAL-GGGSLFIKTHPNSQYL 454 (567)
T ss_dssp EECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEEEECS-CSCCCCEECCTTCSEE
T ss_pred EeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCc--cccCEEEEEEecC-CCCCEEEEeCCCCCeE
Confidence 111 0112222222 1 356534 445543 6789999987653211 1112223222111 1111236789965555
Q ss_pred EEEeeC------CCcEEEEecccC
Q psy18091 358 LASCSD------DGDVKLWQIKLE 375 (377)
Q Consensus 358 laS~s~------Dg~i~iWd~~~~ 375 (377)
.++... .++|.++|+...
T Consensus 455 ~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 455 YVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEecCCCCCcccCceEEEEECCcc
Confidence 554421 468999998754
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=4.4e-09 Score=97.25 Aligned_cols=247 Identities=9% Similarity=-0.005 Sum_probs=155.3
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC--cEEEEEcCCCCc
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDE 175 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg--~v~~wd~~~~~~ 175 (377)
.....++|+++++++++...++.|++||..++....... . ..... ++|+|+++.++.++.++ .|..++......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--G-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--T-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--c-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 356789999999987877778999999998886543322 2 22233 99999999999888876 788888765433
Q ss_pred eeEEEEeec-cccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcce--EEEEEcCC-CCeEEEee
Q psy18091 176 YECAAVINA-HIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV--WSLAFDRI-GSRLATCS 251 (377)
Q Consensus 176 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~-~~~l~s~s 251 (377)
......... ....+..++++|.+..|..+..++.|+.|+...............++...- ..++|+|+ +.++++..
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 222111112 345577899999544444467788999999865432111000011122222 38999995 66667777
Q ss_pred CCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCC--------------CcceeEEEecccCCEEEEEe-CCCcEEE
Q psy18091 252 DDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHH--------------GRTIYDISWCHLTDLIATAC-GDDAIRI 316 (377)
Q Consensus 252 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~~~~-~d~~i~v 316 (377)
.++.|+.|+.... ...+.++. -.....+++.++++++++-. .++.|+.
T Consensus 287 ~~~~I~~~~~~g~-----------------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 287 NLSSVYKITPDGE-----------------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTEEEEECTTCC-----------------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCEEEEEecCCC-----------------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 7888988864210 00111110 12367899999988888777 8899999
Q ss_pred EEeCCCCCCCcceeeeeeec-c---------ccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 317 FKENPEAGDSDMVSFDLVHT-E---------HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~-~---------~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
|+..... +. .+... . ..+.......++++|. +.++++-..++.|+.+++
T Consensus 350 ~~~~~G~----v~--~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILDGY----VS--TVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTE----EE--EEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred EECCCCE----EE--EEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 9743221 00 01110 0 0011345788999995 778888888888888765
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.27 E-value=5e-09 Score=92.49 Aligned_cols=232 Identities=10% Similarity=0.102 Sum_probs=146.7
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 51 GRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 51 ~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
.--.+..|+++ +.++++...++.|+.||.... .. .. + .....+.+++++++|+++++ . ++.|.+||..++
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~--~~--~~-~--~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK--QV--QR-V--TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTC--CE--EE-E--ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCC--cE--EE-E--eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 34457788885 556777778899999997631 11 11 1 23457899999999996554 3 567999999888
Q ss_pred ceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECC---------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC
Q psy18091 130 QFECNATLEG--HENEVKSVTWSKNGQFLATCSRD---------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD 198 (377)
Q Consensus 130 ~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~d---------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (377)
+......... ....+..+++.|+|+++++.... ..-.+|.+........ ........+.++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~---~~~~~~~pngi~~spdg 160 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK---YFDQVDISNGLDWSLDH 160 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE---EEEEESBEEEEEECTTS
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE---EeeccccccceEEcCCC
Confidence 7654433221 12457899999999977765332 2345555543332221 22233456789999999
Q ss_pred cEE-EEeeCCCcEEEEecCcccccc---eeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 199 NIL-ASASYDDTVKLFKEDKAEADW---INFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 199 ~~l-~s~s~dg~i~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
+.+ ++.+.++.|..|+........ ..+..+..+......++++++|.+.++...++.|..|+....
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG---------- 230 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG---------- 230 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC----------
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc----------
Confidence 755 566678899999863111111 112233334456788999999998888888888999974211
Q ss_pred CCCcEEEEEeecCCCCcceeEEEec-ccCCEEEEEeC
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 310 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 310 (377)
+....+... ...+++++|. |+.+.|..++.
T Consensus 231 -----~~~~~i~~p-~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 -----KRLQTVKLP-VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -----CEEEEEECS-SSBEEEEEEESGGGCEEEEEEB
T ss_pred -----eEEEEEECC-CCCceEEEEeCCCCCEEEEEcC
Confidence 112223221 2468889997 77776655543
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.27 E-value=5.6e-09 Score=96.58 Aligned_cols=241 Identities=15% Similarity=0.134 Sum_probs=154.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC--cEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~ 128 (377)
...+.++|+++|+++++...++.|+.||.+. ... ..+... ..... ++|+|+++.|+.+..++ .|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~--g~~--~~~~~~--~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDD--NKV--TTVHPG--FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTT--TEE--EEEEET--CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCC--CEE--EEeecc--CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 4678999999999888888889999999863 111 111111 22233 88999999988888766 788888765
Q ss_pred CceE-EeEEecC-ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccce--eEEEEeeC-CcEE
Q psy18091 129 GQFE-CNATLEG-HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQDV--KKVRFHPF-DNIL 201 (377)
Q Consensus 129 ~~~~-~~~~~~~-h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~v--~~~~~~~~-~~~l 201 (377)
+... ....+.. ....+.+++++|++..|+.+..++.|+.||...... ..... ...+...- ..++|+|+ +.++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 4321 1111112 446678899999555555577888999999876542 11111 11111112 28999995 6777
Q ss_pred EEeeCCCcEEEEecCcccccceeeeecc------------cCCcceEEEEEcCCCCeEEEee-CCCcEEEEeeeCCCCCC
Q psy18091 202 ASASYDDTVKLFKEDKAEADWINFATLK------------SHTSTVWSLAFDRIGSRLATCS-DDATVKIWKEYKPGNSA 268 (377)
Q Consensus 202 ~s~s~dg~i~~~~~~~~~~~~~~~~~~~------------~h~~~v~~~~~~~~~~~l~s~s-~D~~i~iw~~~~~~~~~ 268 (377)
++-..++.|+.|+...... .+.... ..-.....++++++|.++++-+ .++.|+.|+.....
T Consensus 283 v~d~~~~~I~~~~~~g~~~---~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~--- 356 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGECE---WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY--- 356 (409)
T ss_dssp EEETTTTEEEEECTTCCEE---EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE---
T ss_pred EEeCCCCEEEEEecCCCEE---EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE---
Confidence 7777888999998653211 110000 0123478899999999888888 88999999842110
Q ss_pred CCCCCCCCCcEEEEEeecCC--------------CCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 269 GIPTPDNDSVWKCVCTLSGH--------------HGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+.++.++ .-.....+++.+++.++++-..++.|+.+.
T Consensus 357 -------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 357 -------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp -------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred -------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 1111111 012467888988877777777788887764
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.26 E-value=3.6e-08 Score=86.41 Aligned_cols=242 Identities=8% Similarity=-0.025 Sum_probs=162.2
Q ss_pred CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCc
Q psy18091 96 HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDE 175 (377)
Q Consensus 96 h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~ 175 (377)
......+++++++|+..++...++.|.+||.. ++... ..+..+...+.++++.++++.+++...++.|..+|.. ..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~- 93 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG- 93 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC-
Confidence 34567889999999988877678999999987 65542 2334445678999999999888777667889999976 32
Q ss_pred eeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCc
Q psy18091 176 YECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDAT 255 (377)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 255 (377)
... .........+..+.+.++++++++...++.|..++.. .... . .........+..++++++|.++++...++.
T Consensus 94 ~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~--~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 94 FTE-YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY--E-YDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp EEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE--E-EECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred eEE-ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE--E-ccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 221 1222233568889999999988888778899999876 2211 1 112223456889999999997777777788
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeee
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVH 335 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~ 335 (377)
|..++. .. . ... ..... ....+..+.+.+++.++++....+.+.+|+.. .. .....
T Consensus 169 i~~~~~-~g-~------------~~~-~~~~~-~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~----~~~~~--- 224 (300)
T 2qc5_A 169 IGRITN-TG-K------------LEE-YPLPT-NAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GE----ISEYD--- 224 (300)
T ss_dssp EEEECT-TC-C------------EEE-EECSS-TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC----EEEEE---
T ss_pred EEEECC-CC-c------------EEE-eeCCC-CCCCcceEEECCCCCEEEEccCCCEEEEEcCC-Cc----EEEEE---
Confidence 888864 11 1 000 11111 22357788888888877777677788888651 11 11110
Q ss_pred ccccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 336 TEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 336 ~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
...+...+.+++++|. +.++++...++.|..||..
T Consensus 225 --~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 225 --IPTPNARPHAITAGKN-SEIWFTEWGANQIGRITND 259 (300)
T ss_dssp --CSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT
T ss_pred --CCCCCCCceEEEECCC-CCEEEeccCCCeEEEECCC
Confidence 1123456789999995 5567666667889888863
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.24 E-value=2.9e-09 Score=93.05 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=140.6
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecc-
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAH- 185 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~- 185 (377)
.++.|++++.|+.|.+||..+|+.. ..+..+. ..+.++.+.|+|+.++ +.++.|..||. +.+.+.. +..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~---~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV--WEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWN---IAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE--EEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEE---EECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE--EEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEE---EcCCC
Confidence 4678999999999999999899765 4444444 4688999999999888 45788999998 4443322 2222
Q ss_pred ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccce-eee-ecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 186 IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWI-NFA-TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 186 ~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~-~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
...+..+.+.|+++++++.+. ++.+..++... +..|. .+. ....+......+++.++|.++++.+.++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~G-k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNMKG-EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECTTS-CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeCCC-CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 245778889999999999887 77787777532 22111 111 111222344456788999999999999999999842
Q ss_pred CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecc-ccce
Q psy18091 263 KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTE-HRAH 341 (377)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~-~~~h 341 (377)
++ .+..+... ...+.+...+.+++++++..++.+..++..+.+ ..+...... ....
T Consensus 155 --G~--------------~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~-----~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 155 --GQ--------------LLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR-----IVRRVNANDIEGVQ 211 (276)
T ss_dssp --SC--------------EEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC-----EEEEEEGGGSBSCC
T ss_pred --CC--------------EEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc-----EEEEecCCCCCCcc
Confidence 11 11222211 234556667788889888888888888654322 122221111 0112
Q ss_pred ecceeEEEecCCCCceEEEe
Q psy18091 342 NQDVNCVAWNPVVPGMLASC 361 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~ 361 (377)
...+..++..| ++.++++.
T Consensus 212 l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 212 LFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp CSEEEEEEECT-TSCEEEEE
T ss_pred ccccccceEcC-CCCEEEEe
Confidence 23366777777 45556555
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=4.1e-10 Score=102.44 Aligned_cols=179 Identities=11% Similarity=0.093 Sum_probs=123.6
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCc---------eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQ---------FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWE 169 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd 169 (377)
.++.+++++...++++|+.++ +.+|++...+ ....... .+.. |..++| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688899999999999999875 6669854322 2221222 3556 999999 88999988 889999999
Q ss_pred cCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 170 VGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
++...... ....+...+..+.+.+. .+++++.||.+.+|++...... .+...|++++|+|+| ++.
T Consensus 113 v~sl~~~~---~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~--------~~~~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 113 LEELSEFR---TVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK--------QLAQNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSSTTCEE---EEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE--------EEEESEEEEEECSSE--EEE
T ss_pred chhhhccC---ccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc--------cccCCceEEEEcCCc--eEE
Confidence 98765322 33455566777665543 3889999999999999754421 145689999999999 788
Q ss_pred eeCCCcEEEEeeeCCCC--CCCCCCCCCCCcEEEEEeecC--CCCcceeEEEecccCCEEEE
Q psy18091 250 CSDDATVKIWKEYKPGN--SAGIPTPDNDSVWKCVCTLSG--HHGRTIYDISWCHLTDLIAT 307 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 307 (377)
|..||++++|+...... ...++.|. .+.. .++..|.++.|.+...++++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp---------~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPS---------ELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCH---------HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCc---------ccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999997532210 00111110 0010 13568999999987776665
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.23 E-value=2e-08 Score=91.05 Aligned_cols=288 Identities=9% Similarity=0.059 Sum_probs=160.2
Q ss_pred EEECCCCCEEEEEeC-----CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCc
Q psy18091 56 VSWNPQGTMISSCGE-----DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDAT 120 (377)
Q Consensus 56 v~~~~~g~~l~s~s~-----D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~ 120 (377)
....|++++++.... +++|.+.|..+. +.. ..+..+.. + .++++|+|++++.++ .++.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~--~~I~vG~~-P--~va~spDG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVI--GMIDGGFL-P--NPVVADDGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEE--EEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEE--EEEECCCC-C--cEEECCCCCEEEEEcccccccccCCCCCE
Confidence 456789988877765 678999998642 211 12222332 2 389999999887765 3678
Q ss_pred EEEEeCCCCceEEeEEecC--c---cCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 121 TAVWDKRSGQFECNATLEG--H---ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~~--h---~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
|.+||..+++......+.. + ......++|+|||++++.+.. ++.|.++|+.+..... .+... .. ..
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~---tI~v~--g~--~~ 183 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR---MLDVP--DC--YH 183 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECC--SE--EE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE---EEECC--Cc--ce
Confidence 9999999887554333321 0 123457899999999888864 6899999998874332 22211 11 12
Q ss_pred EeeC-CcEEEEeeCCCcEEEEecCcc-cccceeeeecccCCcceE-EEEEc-CCCCeEEEeeCCCcEEEEeeeCCCCCCC
Q psy18091 194 FHPF-DNILASASYDDTVKLFKEDKA-EADWINFATLKSHTSTVW-SLAFD-RIGSRLATCSDDATVKIWKEYKPGNSAG 269 (377)
Q Consensus 194 ~~~~-~~~l~s~s~dg~i~~~~~~~~-~~~~~~~~~~~~h~~~v~-~~~~~-~~~~~l~s~s~D~~i~iw~~~~~~~~~~ 269 (377)
..|. ...+++.+.||.+.+.++... ...-.....+..-..++. ...|. ++|+++. .+.+|.|.+.|........
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v- 261 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKF- 261 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEE-
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCccee-
Confidence 2343 456678888888888877542 210000000111111221 23554 5665443 5558899999864221100
Q ss_pred CCCCCCCCcEEEEE---eecCCCCcceeEEEecccCCEEEEEeCC----------CcEEEEEeCCCCCCCcceeeeeeec
Q psy18091 270 IPTPDNDSVWKCVC---TLSGHHGRTIYDISWCHLTDLIATACGD----------DAIRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 270 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
.. .+.... ...+-.......+.++++++.++....+ +.|-+++..+.+ ++.+
T Consensus 262 -~~-----~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---------v~~~ 326 (386)
T 3sjl_D 262 -LP-----AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---------RLAK 326 (386)
T ss_dssp -CC-----CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEE
T ss_pred -ec-----ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------EEEE
Confidence 00 000000 0000000111234556777776665431 235555544332 2222
Q ss_pred cccceecceeEEEecCCCC-ceEEEeeCCCcEEEEecccCC
Q psy18091 337 EHRAHNQDVNCVAWNPVVP-GMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~-~~laS~s~Dg~i~iWd~~~~~ 376 (377)
...+ ..+..++++|++. .++++...++.|.++|..+.+
T Consensus 327 i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 327 FEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 2223 2678999999643 355566779999999998764
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.21 E-value=2.9e-09 Score=105.44 Aligned_cols=240 Identities=11% Similarity=0.113 Sum_probs=142.5
Q ss_pred ccccCCEEEEEECCCCCEEE-----EEeCCCcEEEeecccCCCcccceeeeeccCcCc--eeEEEECCCCCEEEEEECCC
Q psy18091 47 KGHQGRVWNVSWNPQGTMIS-----SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRT--IRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 47 ~~h~~~V~~v~~~~~g~~l~-----s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~--V~~~~~~~~~~~l~s~s~d~ 119 (377)
++|...+..++|||||++|| .|+.+.+|++||+++. ..... +... ...++|+ |++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg--~~~~~------~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK--QPLET------PLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC--SEEEE------EEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC--CCCcc------ccCCceeccEEEe-CCCEEEEEEecC
Confidence 45667889999999999887 3444467999998752 11111 1112 2567899 999999888774
Q ss_pred c-------------EEEEeCCCCceEEeEEec--C-ccCCEEEEEEcCCCCEEEEEEC----CCcEEEEEcCCCC-ceeE
Q psy18091 120 T-------------TAVWDKRSGQFECNATLE--G-HENEVKSVTWSKNGQFLATCSR----DKSVWVWEVGEED-EYEC 178 (377)
Q Consensus 120 ~-------------i~iwd~~~~~~~~~~~~~--~-h~~~v~~l~~~~~~~~l~s~~~----dg~v~~wd~~~~~-~~~~ 178 (377)
. |.+|++.+++.+....+. . |...+..+.|+|||++++.... ...|+++|+.... ...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~- 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL- 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-
Confidence 3 899998876532222232 2 4455788999999998754432 2489999987653 222
Q ss_pred EEEeeccccceeEEEEeeCCcEEE-EeeCC---CcEEEEecCcccc-cceeeeecccCCcceEEEEEcCCCCeEEEeeC-
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILA-SASYD---DTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSD- 252 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d---g~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~- 252 (377)
.+..+....... +++++..|+ ....+ +.|..+++..... .| ..+..|...+. .|+++++.|+....
T Consensus 275 --~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~---~~l~~~~~~~~--~~s~~g~~lv~~~~~ 346 (693)
T 3iuj_A 275 --TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW---RDLIPERQQVL--TVHSGSGYLFAEYMV 346 (693)
T ss_dssp --EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC---EEEECCCSSCE--EEEEETTEEEEEEEE
T ss_pred --EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc---EEEecCCCCEE--EEEEECCEEEEEEEE
Confidence 233333434333 566665544 44433 5688888775442 22 23445555554 78888988776654
Q ss_pred CC--cEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCC----CcEEEEEeC
Q psy18091 253 DA--TVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGD----DAIRIFKEN 320 (377)
Q Consensus 253 D~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~v~~~~ 320 (377)
|+ .|++|+... +. ...+.......+..++++++++.++....+ +.+..|+..
T Consensus 347 ~g~~~l~~~d~~g-~~---------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 347 DATARVEQFDYEG-KR---------------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp TTEEEEEEECTTS-CE---------------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCeeEEEEEECCC-Ce---------------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 44 566776421 00 111111112345566677666655444333 566666543
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.18 E-value=2.1e-07 Score=84.81 Aligned_cols=286 Identities=9% Similarity=-0.048 Sum_probs=159.9
Q ss_pred EECCCCCEEEEEeC--CC---cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcE
Q psy18091 57 SWNPQGTMISSCGE--DK---NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATT 121 (377)
Q Consensus 57 ~~~~~g~~l~s~s~--D~---~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i 121 (377)
...|++++++.... .. +|.++|..+. +. ...+..+. .+ .++++|+|++++.+. .++.|
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~--~~--~~~i~~g~-~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v 99 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG--SI--LGHVNGGF-LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCC--eE--EEEecCCC-CC--CeEECCCCCEEEEEeccccccccCCCCCeE
Confidence 44578887766543 22 7899998642 11 11222232 22 789999999988876 36789
Q ss_pred EEEeCCCCceEEeEEec--C---ccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEE-eeccccceeEEE
Q psy18091 122 AVWDKRSGQFECNATLE--G---HENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAV-INAHIQDVKKVR 193 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~--~---h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~-~~~~~~~v~~~~ 193 (377)
.+||..+.+......+. . +......++|+|||++++.+.. ++.|.++| .+.... .. +... .++.
T Consensus 100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~---~~~i~~~----~~~~ 171 (373)
T 2mad_H 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD---DQLLSSP----TCYH 171 (373)
T ss_pred EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE---eEEcCCC----ceEE
Confidence 99999876543322222 0 0123458899999999998874 57899999 766432 22 2211 1244
Q ss_pred EeeCC-cEEEEeeCCCcEEEEecCcccccceee-eecccCCcc-eEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCC
Q psy18091 194 FHPFD-NILASASYDDTVKLFKEDKAEADWINF-ATLKSHTST-VWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGI 270 (377)
Q Consensus 194 ~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~-~~~~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~ 270 (377)
+.|.+ ..+++.+.||.+.+++. ......... ........+ .....+.+++..++..+.++.+.+.|+....... +
T Consensus 172 ~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v-~ 249 (373)
T 2mad_H 172 IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATN-K 249 (373)
T ss_pred EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceE-e
Confidence 55655 56677888999999988 433211000 000011112 1234566666555444467888888864221100 0
Q ss_pred CCCCCCCcEEEEE---eecCCCCcceeEEEecccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeecc
Q psy18091 271 PTPDNDSVWKCVC---TLSGHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTE 337 (377)
Q Consensus 271 ~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~ 337 (377)
. .+.... ...+........+.++++++.+.++.. ++.|.+++....+ ++.+.
T Consensus 250 ~------~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---------vv~~i 314 (373)
T 2mad_H 250 A------PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---------TSSQI 314 (373)
T ss_pred e------eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---------EEEEE
Confidence 0 000000 000001112334667888777776653 2457777654332 12222
Q ss_pred ccceecceeEEEecCCCCceEEEee-CCCcEEEEecccCC
Q psy18091 338 HRAHNQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 338 ~~~h~~~v~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~~~ 376 (377)
..++ ...+++|+|++...++++. .++.|.++|..+.+
T Consensus 315 ~~g~--~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 315 SLGH--DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ECCC--CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 2222 4789999995442566666 58999999998754
No 210
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.18 E-value=2.9e-08 Score=88.90 Aligned_cols=237 Identities=5% Similarity=0.004 Sum_probs=147.6
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
.....+.+. ++++.++...+++|.+||..+.. .. . .+ ........++++++++..++...++.|.+||..+++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--~~-~-~i--~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--EV-G-RI--TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--EE-E-EE--ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccE--EE-E-Ec--CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe
Confidence 346777774 34566666678999999987431 11 1 11 123567889998888555554478999999999887
Q ss_pred eEEeEEecC---ccCCEEEEEEcCCCCEEEEEE--CCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEee
Q psy18091 131 FECNATLEG---HENEVKSVTWSKNGQFLATCS--RDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 131 ~~~~~~~~~---h~~~v~~l~~~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s 205 (377)
......... +......+++ ++..++.++ .++.|.++|+.+..... .+... .....+.++|++++++++.
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~---~i~~g-~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD---ELTIG-IQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE---EEECS-SCBCCCEECTTSEEEEEBC
T ss_pred EEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE---EEEcC-CCccceEEcCCCCEEEEEC
Confidence 553333222 0114456667 344555554 48899999998764322 22222 2346788999999888776
Q ss_pred CC----------CcEEEEecCcccccceeeeeccc-CCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCC
Q psy18091 206 YD----------DTVKLFKEDKAEADWINFATLKS-HTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPD 274 (377)
Q Consensus 206 ~d----------g~i~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~ 274 (377)
.+ +.|.++|....+.. ..+.. .......++|+|++++|..+.. .|.+||........ ..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~----~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~-~~--- 260 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVE----KQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV-RP--- 260 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEE----EEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS-SC---
T ss_pred CCccCCccccCCceEEEEECCCCeEE----EEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee-ee---
Confidence 65 78999998654321 11111 1235789999999988776544 88888863221110 00
Q ss_pred CCCcEEEEEeecCCCCcceeEEEecccC-CEEEEE----eCCCcEEEEEeC
Q psy18091 275 NDSVWKCVCTLSGHHGRTIYDISWCHLT-DLIATA----CGDDAIRIFKEN 320 (377)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~----~~d~~i~v~~~~ 320 (377)
.... .+.....++++|++ .++++. ..++.|.+|+..
T Consensus 261 ---------~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 261 ---------FLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ---------SBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ---------eecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 0000 13467889999854 555555 578899999754
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.17 E-value=6.3e-08 Score=85.35 Aligned_cols=235 Identities=11% Similarity=0.110 Sum_probs=141.7
Q ss_pred ceeEEEECCC-CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 99 TIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 99 ~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
--....|+|+ +..+++...++.|..||..+++... . .....+.+++++++|+++++ . +..|.+||..+.. ..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~---~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~-~~ 86 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V---TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS-AV 86 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E---ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE-EE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E---eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc-EE
Confidence 3456789995 4566666678999999998876532 1 13467999999999995554 3 5679999987653 22
Q ss_pred EEEEeec--cccceeEEEEeeCCcEEEEeeCC---------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe
Q psy18091 178 CAAVINA--HIQDVKKVRFHPFDNILASASYD---------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR 246 (377)
Q Consensus 178 ~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d---------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 246 (377)
....... ....++.+.++|+|+++++.... ..-.+|.+.... . ......+......++|+|+++.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~---~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H---VKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C---EEEEEEEESBEEEEEECTTSCE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C---EEEEeeccccccceEEcCCCCE
Confidence 1111111 12347789999999977765332 233455443211 1 1112223334678999999986
Q ss_pred E-EEeeCCCcEEEEeee-CCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCC
Q psy18091 247 L-ATCSDDATVKIWKEY-KPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAG 324 (377)
Q Consensus 247 l-~s~s~D~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~ 324 (377)
| ++.+.++.|..|+.. ..+.. ........+..+ ......+++.+++++.++....+.|.+|+....+
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~---------~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~- 231 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQI---------SNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK- 231 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCE---------EEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC-
T ss_pred EEEecCCCCcEEEEeccCCCCcc---------cCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce-
Confidence 5 566778899999863 11110 001112222221 2356778888888888888888888888654222
Q ss_pred CCcceeeeeeeccccceecceeEEEec-CCCCceEEEeeCC
Q psy18091 325 DSDMVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCSDD 364 (377)
Q Consensus 325 ~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~laS~s~D 364 (377)
++.. ...+...+++++|. |+...++++...+
T Consensus 232 --------~~~~-i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 232 --------RLQT-VKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp --------EEEE-EECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred --------EEEE-EECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 1111 11234568999998 7555566665543
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=1.9e-08 Score=89.09 Aligned_cols=237 Identities=12% Similarity=0.100 Sum_probs=145.1
Q ss_pred ccccccCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+..+........|+|+|+ +++++..++.|..|+.. +. . . .+ ..+...+..++++++|+++++...++.|.+
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~--g~-~--~-~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED--GT-V--D-VL-LDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT--SC-E--E-EE-EESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC--CC-E--E-EE-eCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3444455677899999998 67788888999999763 21 1 1 11 124456889999999997776656678999
Q ss_pred EeCCCCceEEeE-EecCc-cCCEEEEEEcCCCCEEEE----EEC-------------CCcEEEEEcCCCCceeEEEEeec
Q psy18091 124 WDKRSGQFECNA-TLEGH-ENEVKSVTWSKNGQFLAT----CSR-------------DKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 124 wd~~~~~~~~~~-~~~~h-~~~v~~l~~~~~~~~l~s----~~~-------------dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
|+.. ++..... ...+. ...+..+++.|+|+.+++ |.. .+.|..+|..+... ... .
T Consensus 112 ~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~---~- 185 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRM---A- 185 (305)
T ss_dssp ECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEE---E-
T ss_pred ECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEE---e-
Confidence 9986 5543221 11111 234678999999998886 321 24567777644432 211 1
Q ss_pred cccceeEEEEeeCCcEEEEeeCC------CcEEEEecCcccccceeeeec-ccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 185 HIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.....+.++|+|+++.|..+... +.|..|++.... ......+ .........++++++|.+.++. .+ .|.
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~ 261 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVC 261 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEE
Confidence 33456789999999877666554 689999875322 1000111 1122334568899999855554 44 488
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
+|+.. + .....+... ..+..++|+++++.|..++.++..++
T Consensus 262 ~~~~~--g--------------~~~~~~~~~--~~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 262 VFDSD--G--------------QLLGHIPTP--GTASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECTT--S--------------CEEEEEECS--SCCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EECCC--C--------------CEEEEEECC--CceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 88631 1 112222221 24778888888877777776644433
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.13 E-value=4.8e-09 Score=103.86 Aligned_cols=247 Identities=15% Similarity=0.117 Sum_probs=141.6
Q ss_pred cCcCceeEEEECCCCCEEEE-----EECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCc-----
Q psy18091 95 GHQRTIRETAWSPCGNFIAS-----ASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKS----- 164 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l~s-----~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~----- 164 (377)
+|...+..++|||+|++||- |+....|++||+.+|+.... .+.+. ....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 45557888999999998883 33335799999999975432 22211 12467899 9999888887743
Q ss_pred --------EEEEEcCCCCce-eEEEEeec-cccceeEEEEeeCCcEEEEeeC----CCcEEEEecCcccccceeeeeccc
Q psy18091 165 --------VWVWEVGEEDEY-ECAAVINA-HIQDVKKVRFHPFDNILASASY----DDTVKLFKEDKAEADWINFATLKS 230 (377)
Q Consensus 165 --------v~~wd~~~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~----dg~i~~~~~~~~~~~~~~~~~~~~ 230 (377)
|++|++.+.... .+...... |......+.++|++++++.... +..+.++++..+...+ ..+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~---~~l~~ 278 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL---LTVQG 278 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC---EEEEC
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce---EEEeC
Confidence 999998765421 11111122 3334677899999998755432 2478889887654332 23344
Q ss_pred CCcceEEEEEcCCCCeEEEee-CC---CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEE
Q psy18091 231 HTSTVWSLAFDRIGSRLATCS-DD---ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIA 306 (377)
Q Consensus 231 h~~~v~~~~~~~~~~~l~s~s-~D---~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 306 (377)
+....... ++++|..|+..+ .| +.|..+++..+.. ..|. .+..+....+ .|++.++.|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~----------~~~~---~l~~~~~~~~---~~s~~g~~lv 341 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP----------AHWR---DLIPERQQVL---TVHSGSGYLF 341 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG----------GGCE---EEECCCSSCE---EEEEETTEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc----------cccE---EEecCCCCEE---EEEEECCEEE
Confidence 54444444 566666555433 33 4577776533211 0111 2333333333 7778888766
Q ss_pred EEeC-CC--cEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCC---CcEEEEecccC
Q psy18091 307 TACG-DD--AIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDD---GDVKLWQIKLE 375 (377)
Q Consensus 307 ~~~~-d~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~D---g~i~iWd~~~~ 375 (377)
.... ++ .+++|+..... . ......+...+..++++|.+..++++.+.. ++|..||+...
T Consensus 342 ~~~~~~g~~~l~~~d~~g~~-----~-----~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 342 AEYMVDATARVEQFDYEGKR-----V-----REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEEETTEEEEEEECTTSCE-----E-----EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEEECCeeEEEEEECCCCe-----e-----EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 6654 44 35555433111 0 011111233466777787655555444332 78888887543
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.11 E-value=1.5e-07 Score=84.25 Aligned_cols=226 Identities=10% Similarity=0.001 Sum_probs=140.0
Q ss_pred EEEEEECCCC-CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCce
Q psy18091 53 VWNVSWNPQG-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQF 131 (377)
Q Consensus 53 V~~v~~~~~g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 131 (377)
..+..|+|++ .++++...++.|..|+.+. ... .. + .....+.+++|+|+|+++++. . ..|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--~~~--~~-~--~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLAS--GRK--TV-H--ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTT--TEE--EE-E--ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCC--CcE--EE-E--ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE
Confidence 4577899975 4667777789999998763 211 11 1 123578999999999877754 3 4499999988876
Q ss_pred EEeEEecC--ccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-E
Q psy18091 132 ECNATLEG--HENEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-A 202 (377)
Q Consensus 132 ~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~ 202 (377)
........ ....+..++++|+|+++++... .+.|..++ . ..... +..+....+.++|+|+++.+ +
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~~~~---~~~~~~~~~~i~~s~dg~~lyv 195 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GKVTK---LFADISIPNSICFSPDGTTGYF 195 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TEEEE---EEEEESSEEEEEECTTSCEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-CcEEE---eeCCCcccCCeEEcCCCCEEEE
Confidence 43322111 1235889999999997776542 24455555 2 22221 12223456789999999765 4
Q ss_pred EeeCCCcEEEEecC--cc-cc-cceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCc
Q psy18091 203 SASYDDTVKLFKED--KA-EA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSV 278 (377)
Q Consensus 203 s~s~dg~i~~~~~~--~~-~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~ 278 (377)
+.+.++.|.+|+.. .. .. ....+..+.........++++++|.++++...++.|..|+. .. .
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g-~------------ 261 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG-N------------ 261 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC-C------------
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CC-C------------
Confidence 55567899999975 22 11 00112223333445678999999988887777788999874 11 1
Q ss_pred EEEEEeecCCCCcceeEEEec-ccCCEEEEEeC
Q psy18091 279 WKCVCTLSGHHGRTIYDISWC-HLTDLIATACG 310 (377)
Q Consensus 279 ~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~ 310 (377)
....+.. ....+.+++|. ++++.|..++.
T Consensus 262 --~~~~i~~-~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 262 --HIARYEV-PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp --EEEEEEC-SCSBEEEEEEESTTSCEEEEEEB
T ss_pred --EEEEEEC-CCCCcEEEEEecCCCCEEEEEec
Confidence 1122222 12368889987 77666655443
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.10 E-value=1.1e-08 Score=90.58 Aligned_cols=197 Identities=9% Similarity=0.002 Sum_probs=124.3
Q ss_pred cccccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEE----EEC----
Q psy18091 46 LKGHQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIAS----ASF---- 117 (377)
Q Consensus 46 l~~h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s----~s~---- 117 (377)
+..+.+.++.++++++|+++++...++.|..|+.+ +................+.+++++|+|++.++ |..
T Consensus 81 ~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 81 LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp EEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred EeCCCCccceeeECCCCCEEEEECCCCEEEEECCC--CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 44456678999999999987776666889999864 22111100011111234678999999998886 321
Q ss_pred ---------CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCceeEEEEe
Q psy18091 118 ---------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYECAAVI 182 (377)
Q Consensus 118 ---------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~ 182 (377)
.+.|..+|..+++..... .......++|+|+++.++.+... +.|+.|++.... +.....+
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~ 233 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHF 233 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEE
T ss_pred ccccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEE
Confidence 245777777677654332 33467889999999988777665 689999987543 2111111
Q ss_pred -eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEE
Q psy18091 183 -NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVK 257 (377)
Q Consensus 183 -~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 257 (377)
.........+.++++|++.++. .+ .|.+|+..... +..+.... .+.+++|+++++.|..++.++..+
T Consensus 234 ~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~g~~-----~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 234 ASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSDGQL-----LGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTTSCE-----EEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EECCCCCCCeEEECCCCCEEEec-CC-cEEEECCCCCE-----EEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 1122334568899999855554 44 48889874322 22222233 478899999988888777765443
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.06 E-value=5.1e-07 Score=82.27 Aligned_cols=241 Identities=10% Similarity=0.004 Sum_probs=141.7
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--c---CcCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--G---HQRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~---h~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.++++|||++++.+. .+++|.+||..+.. ... .+-.. . +...-..++|+|+|++|+.++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~-~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIA-DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEE-EEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 899999999988875 36789999986421 111 11011 0 0122347899999999998875
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccc-eeEEE
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQD-VKKVR 193 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~-v~~~~ 193 (377)
++.|.++| .+++.... .+.. .. ++.+.|++ +.+++.+.||.+.++|. .......... ......+ .....
T Consensus 147 ~~~v~viD-~t~~~~~~-~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~ 219 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQ-LLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPA 219 (373)
T ss_pred CCeEEEEE-CCCCEEeE-EcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecce
Confidence 47899999 88865422 0221 11 24455655 45677889999999999 5543311110 0011111 12234
Q ss_pred EeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc--------cCCcceEEEEEcCCCCeEEEeeC----------CCc
Q psy18091 194 FHPFDNILASASYDDTVKLFKEDKAEADWINFATLK--------SHTSTVWSLAFDRIGSRLATCSD----------DAT 255 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~----------D~~ 255 (377)
+.+++..++..+..+.+.+.|............... ........++++++++++..... ++.
T Consensus 220 ~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 220 QANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred eEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 566665554445778888888754322111000000 01122344778888887666543 346
Q ss_pred EEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 256 VKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 256 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
|.++|.... +...++.. +...+.+.|+|+++ .++++. .++.+.+++....
T Consensus 300 V~VID~~t~---------------~vv~~i~~--g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 300 VTSVTGLVG---------------QTSSQISL--GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEEEECCCC---------------EEEEEEEC--CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 777775321 22333322 23578899999998 777777 5899999986543
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=4.4e-07 Score=81.11 Aligned_cols=231 Identities=10% Similarity=0.075 Sum_probs=138.0
Q ss_pred eeEEEECCCC-CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeE
Q psy18091 100 IRETAWSPCG-NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 100 V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 178 (377)
....+|+|++ ..+++...++.|..||..+++... .. ....+.+++|+|+|+++++. .+ .|.+||..+... ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~---~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~-~~ 123 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA---LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL-TL 123 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE---CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE-EE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE---CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE-EE
Confidence 3567899974 456666678899999998876432 12 24579999999999877754 44 499999876532 11
Q ss_pred EEEeec--cccceeEEEEeeCCcEEEEeeCC------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-E
Q psy18091 179 AAVINA--HIQDVKKVRFHPFDNILASASYD------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-T 249 (377)
Q Consensus 179 ~~~~~~--~~~~v~~~~~~~~~~~l~s~s~d------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s 249 (377)
...... ....++.+.++|+|+++++...+ +.|..++ ... . ..+..+......++|+|+++.|. +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~---~~~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK--V---TKLFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE--E---EEEEEEESSEEEEEECTTSCEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc--E---EEeeCCCcccCCeEEcCCCCEEEEE
Confidence 111111 12357889999999877765432 3444444 211 1 11112233467899999998664 5
Q ss_pred eeCCCcEEEEeee-CCC-CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCc
Q psy18091 250 CSDDATVKIWKEY-KPG-NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSD 327 (377)
Q Consensus 250 ~s~D~~i~iw~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~ 327 (377)
.+.++.|.+|+.. ..+ ... .. .....+... ......+.+.++++++++..+++.|.+|+... +
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~------~~---~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g-~---- 261 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTG------KA---EVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDTDG-N---- 261 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSS------CC---EEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECTTC-C----
T ss_pred ECCCCEEEEEEcccccCCccc------Cc---eEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECCCC-C----
Confidence 5567889999864 111 100 00 111222211 22456788888888888777788888886421 1
Q ss_pred ceeeeeeeccccceecceeEEEec-CCCCceEEEeeCCC
Q psy18091 328 MVSFDLVHTEHRAHNQDVNCVAWN-PVVPGMLASCSDDG 365 (377)
Q Consensus 328 ~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~laS~s~Dg 365 (377)
. +.. ...+...+++++|. |+...++++...++
T Consensus 262 ~-----~~~-i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 262 H-----IAR-YEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp E-----EEE-EECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred E-----EEE-EECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 1 001 11234468999998 75455556655553
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.04 E-value=7.3e-08 Score=86.87 Aligned_cols=247 Identities=9% Similarity=-0.024 Sum_probs=148.0
Q ss_pred CCEEEEEECCCCCEEEEEe--CCCcEEEeecccCCCccccee---eeeccCcCceeEEEECCCCCEEEEEEC-----CCc
Q psy18091 51 GRVWNVSWNPQGTMISSCG--EDKNIRLWGKESFGNKFTAKA---ILSDGHQRTIRETAWSPCGNFIASASF-----DAT 120 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s--~D~~v~~W~~~~~~~~~~~~~---~~~~~h~~~V~~~~~~~~~~~l~s~s~-----d~~ 120 (377)
.....++++++|+++++.. .++.++||.+.. + ...... ....+|...+..++++++++++++-.. +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-D-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-T-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-C-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999999988864 234366676541 1 111000 001235568899999999876665433 578
Q ss_pred EEEEeCCCCceEEeEEec----CccCCEEEEEEcCCCCEE-EEEE---CCCcEEEEEcCCCCceeEEEEeecc-------
Q psy18091 121 TAVWDKRSGQFECNATLE----GHENEVKSVTWSKNGQFL-ATCS---RDKSVWVWEVGEEDEYECAAVINAH------- 185 (377)
Q Consensus 121 i~iwd~~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l-~s~~---~dg~v~~wd~~~~~~~~~~~~~~~~------- 185 (377)
|.+||+.+++......+. .+...+..+++++++..+ ++-. .++.|.+||+.+..... .+..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r---~~~~~~~~~~~~ 171 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR---VLQGYPGIAPED 171 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE---ECTTCTTTSCCS
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE---EecCCCcccccc
Confidence 999999988754333332 123456889999865454 4444 57899999987553221 11110
Q ss_pred ----------------------ccceeEEEEeeCCcEEEEeeCCC-cEEEEecCc---cc---ccceeeeecccCCcceE
Q psy18091 186 ----------------------IQDVKKVRFHPFDNILASASYDD-TVKLFKEDK---AE---ADWINFATLKSHTSTVW 236 (377)
Q Consensus 186 ----------------------~~~v~~~~~~~~~~~l~s~s~dg-~i~~~~~~~---~~---~~~~~~~~~~~h~~~v~ 236 (377)
...+..++++|+++.|..+..++ .+..++... .. ..........++.....
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 02357899999998887777665 444443211 00 00000001112333455
Q ss_pred EEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 237 SLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 237 ~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
.++++++|.++++...++.|.+|+... + ....+.. .........+++.+++.++++.+..+.+.+
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~-G------------~~~~~~~--~~~~~~p~~va~~~~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSAD-R------------AYKLLVT--DEKLSWTDSFNFGSDGYLYFDCNQLHHSAP 316 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTT-T------------EEEEEEE--CGGGSCEEEEEECTTSCEEEEECCGGGSGG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCC-C------------CEEEEEE--CCceecCCeeEECCCCcEEEEeCccccccc
Confidence 789999999999999999999998511 0 1111111 111335778888887777777765554444
Q ss_pred E
Q psy18091 317 F 317 (377)
Q Consensus 317 ~ 317 (377)
|
T Consensus 317 f 317 (343)
T 2qe8_A 317 L 317 (343)
T ss_dssp G
T ss_pred c
Confidence 4
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.02 E-value=3.8e-07 Score=84.04 Aligned_cols=284 Identities=10% Similarity=0.061 Sum_probs=159.5
Q ss_pred CCCCEEEEEeC-C----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcEEEE
Q psy18091 60 PQGTMISSCGE-D----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVW 124 (377)
Q Consensus 60 ~~g~~l~s~s~-D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i~iw 124 (377)
+++++++.... + ++|.+.|..+. +.. ..+..+. .+ .++++|++++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv--~~I~vG~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RIL--GMTDGGF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEE--EEEEECS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEE--EEEECCC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 46676655544 2 68999998742 221 1222232 23 789999999887775 36789999
Q ss_pred eCCCCceEEeEEecCc-----cCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC
Q psy18091 125 DKRSGQFECNATLEGH-----ENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF 197 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h-----~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (377)
|..+++......+.+. ......++|+|||++++.+.. ++.|.+.|+.+..... .+... .. ....|.
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~---~I~v~--g~--~~~~p~ 227 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR---MLDVP--DC--YHIFPA 227 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECC--SE--EEEEEE
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE---EEEcC--Cc--eeeccC
Confidence 9998876543333210 123457899999999998874 5789999998864332 22211 11 233444
Q ss_pred C-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcce-EEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCC----CCC
Q psy18091 198 D-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTV-WSLAFDRIGSRLATCSDDATVKIWKEYKPGNSA----GIP 271 (377)
Q Consensus 198 ~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~----~~~ 271 (377)
+ ..+++.+.||.+.+.+.............+.....++ ..+.|.+++..++..+..+.+.+.|........ .+.
T Consensus 228 g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 228 SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 3 5566677777777776632211100000011111111 134678888877777778889998864221000 000
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeeccccce
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH 341 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h 341 (377)
....... +........+.++++++.+++... ++.+.+++....+ ++.+...+.
T Consensus 308 ~~~~i~~--------g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---------vv~~I~vg~ 370 (426)
T 3c75_H 308 TEAERAD--------DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---------RINKIELGH 370 (426)
T ss_dssp CTTTGGG--------TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEEEEEE
T ss_pred ccccccc--------ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---------EEEEEECCC
Confidence 0000000 000001123577888877666542 3467777765433 222222222
Q ss_pred ecceeEEEecCCCCceEEEee-CCCcEEEEecccCC
Q psy18091 342 NQDVNCVAWNPVVPGMLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 342 ~~~v~~v~~~p~~~~~laS~s-~Dg~i~iWd~~~~~ 376 (377)
....++|+|++...++++. .++.|.++|..+.+
T Consensus 371 --~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 371 --EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp --EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred --CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 4788999996441455555 69999999998764
No 220
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.94 E-value=3.7e-07 Score=82.71 Aligned_cols=243 Identities=14% Similarity=0.157 Sum_probs=141.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeecc----CcCceeEEEECCCCCEEEEEEC--C
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSDG----HQRTIRETAWSPCGNFIASASF--D 118 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~~----h~~~V~~~~~~~~~~~l~s~s~--d 118 (377)
.++++|||++++.+. .++.|.+||..+. ..........+ ....-..++|+|+|+++..+.. +
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~--~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL--LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 399999999887665 3678999998753 21111111110 0123456789999999888874 6
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEE--eeccccce-eEEEEe
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAV--INAHIQDV-KKVRFH 195 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~~~~v-~~~~~~ 195 (377)
+.|.++|+.+++........+ . ...+....+.+++.+.||++.+.++........... +......+ ....|.
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g----~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~ 234 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPD----C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS 234 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCS----E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE
T ss_pred CeEEEEECCCCcEEEEEECCC----c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE
Confidence 899999999987654333322 1 223333456778889999999999876433321110 01011111 113454
Q ss_pred -eCCcEEEEeeCCCcEEEEecCcccccceeeee-c-------ccCCcceEEEEEcCCCCeEEEeeC----------CCcE
Q psy18091 196 -PFDNILASASYDDTVKLFKEDKAEADWINFAT-L-------KSHTSTVWSLAFDRIGSRLATCSD----------DATV 256 (377)
Q Consensus 196 -~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~-------~~h~~~v~~~~~~~~~~~l~s~s~----------D~~i 256 (377)
++|+++. .+.+|.+++.|............. + .........++++++++++..... .+.|
T Consensus 235 ~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V 313 (386)
T 3sjl_D 235 QKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFV 313 (386)
T ss_dssp TTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEE
Confidence 4554444 555899999998654321110000 0 001112234677888887666532 2456
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
.+.|+... +.+..+.- +..++.+.++++++ +|+++. .++.+.+++....
T Consensus 314 ~viD~~t~---------------kv~~~i~v--g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 314 VVLDAKTG---------------ERLAKFEM--GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EEEETTTC---------------CEEEEEEE--EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEECCCC---------------eEEEEEEC--CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 67765321 22233321 34678999999986 666655 4899999987544
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.82 E-value=7.4e-08 Score=86.84 Aligned_cols=238 Identities=8% Similarity=-0.009 Sum_probs=139.9
Q ss_pred CceeEEEECCCCCEEEEEEC--CCcEEEEeCCCCceEEeE----EecCccCCEEEEEEcCCCCEEEEEEC-----CCcEE
Q psy18091 98 RTIRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNA----TLEGHENEVKSVTWSKNGQFLATCSR-----DKSVW 166 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~----~~~~h~~~v~~l~~~~~~~~l~s~~~-----dg~v~ 166 (377)
.....++++|+|+.+++... ++.++||.+.+++..... ...+|...+..+++.++++.+++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 46788999999999888642 342555554455432111 11235578999999999876655433 57899
Q ss_pred EEEcCCCCceeEEEEee----ccccceeEEEEeeCC-cEEEEee---CCCcEEEEecCcccccceeeeecccCCcceE-E
Q psy18091 167 VWEVGEEDEYECAAVIN----AHIQDVKKVRFHPFD-NILASAS---YDDTVKLFKEDKAEADWINFATLKSHTSTVW-S 237 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~s~s---~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~-~ 237 (377)
+||+.+....... .+. .+......++++|.+ ..+++.. .++.|.+|+...... ...+..|..... .
T Consensus 97 ~~d~~tg~~~~~~-~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~----~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 97 AWDTLNNQLSRVI-YLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA----ARVLQGYPGIAPED 171 (343)
T ss_dssp EEETTTTEEEEEE-ECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE----EEECTTCTTTSCCS
T ss_pred EEECCCCeEEEEE-ECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE----EEEecCCCcccccc
Confidence 9999866422211 111 122346789999864 5556665 678999999864432 122223321100 0
Q ss_pred EEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEE
Q psy18091 238 LAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIF 317 (377)
Q Consensus 238 ~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 317 (377)
..+..+|..+.+.+.|+.++.|. ..+..++++|+++.|+.+..++. ++|
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~------------------------------~~~~gia~s~dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPH------------------------------LGVNGIVLDAENEWLYLSPMHST-SMY 220 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCC------------------------------CCEEEEEECTTSCEEEEEESSCS-EEE
T ss_pred cceeECCEEEEeccCCCceecee------------------------------cccceeEeccCCCEEEEEeCCCC-eEE
Confidence 23344566666677777776552 13567899999988888776653 455
Q ss_pred EeCCCCC-CCcceeeeeeec-cccceecceeEEEecCCCCceEEEeeCCCcEEEEec
Q psy18091 318 KENPEAG-DSDMVSFDLVHT-EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQI 372 (377)
Q Consensus 318 ~~~~~~~-~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~ 372 (377)
....... ........+... ...++......+++++ ++.++++...++.|.+||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 221 RIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEET
T ss_pred EEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEEC
Confidence 4321100 000000000000 0013344567799999 4778889999999999997
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.76 E-value=2.2e-06 Score=77.54 Aligned_cols=265 Identities=8% Similarity=-0.061 Sum_probs=147.0
Q ss_pred cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE----------CCCcEEEEeCCCCceEEeEEecCc--
Q psy18091 73 NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS----------FDATTAVWDKRSGQFECNATLEGH-- 140 (377)
Q Consensus 73 ~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~~~h-- 140 (377)
+|.+.|..+. +. ...+..+.. + .++++|++++++.+. .++.|.+||..+++......+.+.
T Consensus 47 ~vsvID~~t~--~v--~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCG--VT--LGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTT--EE--EEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCC--eE--EEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 7889987642 22 122223433 3 689999999888876 368899999999876544333210
Q ss_pred ---cCCEEEEEEcCCCCEEEEEEC--CCcEEE--EEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEeeCCCcEEE
Q psy18091 141 ---ENEVKSVTWSKNGQFLATCSR--DKSVWV--WEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASASYDDTVKL 212 (377)
Q Consensus 141 ---~~~v~~l~~~~~~~~l~s~~~--dg~v~~--wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~dg~i~~ 212 (377)
......++++|||++++.+.. +..+.+ +|..+ .. .+... .. ..+.|++ ..+++.+.||.+.+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~---~i~v~--~~--~~~~p~g~~~~~~~~~dg~~~~ 189 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQ---LTKSA--SC--FHIHPGAAATHYLGSCPASLAA 189 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EE---EEECS--SC--CCCEEEETTEEECCCCTTSCEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ce---EEECC--Cc--eEEccCCCeEEEEEcCCCCEEE
Confidence 123557899999999998875 457888 88765 11 12110 11 1233444 45567778888888
Q ss_pred EecCc-----ccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCC--CCCCCCCCCCcEEEEEee
Q psy18091 213 FKEDK-----AEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNS--AGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 213 ~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~ 285 (377)
.+... ....+.....+..-..+. . .+++..++-.+. +.+.+.|....... ..+...... . ..
T Consensus 190 vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~-~-----~~ 258 (368)
T 1mda_H 190 SDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG-R-----KA 258 (368)
T ss_dssp EECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH-H-----HH
T ss_pred EECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc-c-----cc
Confidence 88764 111100000011112233 3 555666555555 88888886321100 000000000 0 00
Q ss_pred cCCCCcceeEEEecccCCEEEEEeC---------CCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCc
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACG---------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPG 356 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 356 (377)
.+........+.++++++.++.+.. ++.+.+++....+ .+.+...+. ...+++|+|++..
T Consensus 259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---------vv~~i~vg~--~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---------TSGPISNGH--DSDAIIAAQDGAS 327 (368)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---------EEECCEEEE--EECEEEECCSSSC
T ss_pred cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---------EEEEEECCC--CcceEEECCCCCE
Confidence 0000001111568888887776543 2355588765543 122222222 4788999996555
Q ss_pred eEEEee-CCCcEEEEecccCC
Q psy18091 357 MLASCS-DDGDVKLWQIKLEN 376 (377)
Q Consensus 357 ~laS~s-~Dg~i~iWd~~~~~ 376 (377)
++++.. .+++|.++|+.+.+
T Consensus 328 l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 328 DNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEETTTTEEEEEESSSCE
T ss_pred EEEEccCCCCeEEEEECCCCc
Confidence 777777 69999999998654
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.73 E-value=2.1e-06 Score=79.14 Aligned_cols=242 Identities=12% Similarity=0.091 Sum_probs=143.0
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--c---CcCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--G---HQRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~---h~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.+.++|||++++.+. .++.|.++|..+. +.. ..+... + ....-..++|+|+|++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~--~vv-~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF--LPI-ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC--CEE-EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC--cEE-EEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 899999999887775 4678999998743 111 111111 0 0122345789999999998875
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCCCCceeEE-EEeeccccce-eEEEE
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGEEDEYECA-AVINAHIQDV-KKVRF 194 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~~~~v-~~~~~ 194 (377)
++.|.+.|..+++........+ . ....|++ +.+++.+.||.+.+.+.......... ..+.....++ ..+.+
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g----~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~ 272 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPD----C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAF 272 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCS----E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEE
T ss_pred CCeEEEEECCCCeEEEEEEcCC----c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeee
Confidence 5789999999987643333221 1 2333443 56677788888888887433221100 0111111111 23457
Q ss_pred eeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-----c---CCcceEEEEEcCCCCeEEEeeC----------CCcE
Q psy18091 195 HPFDNILASASYDDTVKLFKEDKAEADWINFATLK-----S---HTSTVWSLAFDRIGSRLATCSD----------DATV 256 (377)
Q Consensus 195 ~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-----~---h~~~v~~~~~~~~~~~l~s~s~----------D~~i 256 (377)
.+++..++..+..+.+.+.|............... . .......++++++++++..... ++.|
T Consensus 273 ~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V 352 (426)
T 3c75_H 273 SLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV 352 (426)
T ss_dssp CTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE
Confidence 88887776667788899988754321110000000 0 0111123688999886555431 3568
Q ss_pred EEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 257 KIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 257 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
.++|.... +.+.++.. +...+.+.++++++ .++++. .++.+.+++....
T Consensus 353 sVID~~T~---------------kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 353 VVLNAETG---------------ERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEETTTC---------------CEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEECCCC---------------eEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 88885321 11222321 23578899999998 888888 5999999987554
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.61 E-value=9.1e-09 Score=93.82 Aligned_cols=180 Identities=10% Similarity=0.029 Sum_probs=92.6
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
++..+++++.|+.|+.||..+....+... . ..+.+..+..++..+++++.|+.+..||..+|+... ....+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~-----~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK-----E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE-----C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--ECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec-----C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--eeecc
Confidence 47889999999999999987543222221 1 344444455677778878899999999998876432 22221
Q ss_pred cC-CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccc
Q psy18091 141 EN-EVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAE 219 (377)
Q Consensus 141 ~~-~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~ 219 (377)
.. .+.+......+..+++++.++.++.||..+++.... ...+. ...++|.+..+++++.|+.++.||....+
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~---~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT---LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEE---ecCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 11 010000001345677888899999999987654322 11111 23456788899999999999999988776
Q ss_pred ccceeeeecccCCcceEEEEEcCCC---CeEEEeeCCCcEEEEeee
Q psy18091 220 ADWINFATLKSHTSTVWSLAFDRIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 220 ~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
..|... .... ...++..+. ..++.++.|+.++.||..
T Consensus 152 ~~W~~~--~~~~----~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 152 LRWNAT--YFDY----AASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp CCCEEE--EEEE----CCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred EEEeEe--cccc----cCccccCCccccceEEEECCCCEEEEEECC
Confidence 655421 1111 112233322 567778899999999853
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.58 E-value=7.8e-05 Score=68.31 Aligned_cols=232 Identities=9% Similarity=0.036 Sum_probs=135.9
Q ss_pred CCCCE-EEEEeCCCcEEEeecccCCCcccceeeee-----ccC-cCceeEEEECCCCCEEEEEECC------CcEEEEeC
Q psy18091 60 PQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILS-----DGH-QRTIRETAWSPCGNFIASASFD------ATTAVWDK 126 (377)
Q Consensus 60 ~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~~h-~~~V~~~~~~~~~~~l~s~s~d------~~i~iwd~ 126 (377)
.++++ +++|..+.+|.+.|..+..........+. ... ...-..+...|+| .++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 66775 46677889999999864322222222221 000 0122345678999 76666555 78999999
Q ss_pred CCCceEEeEEecCcc-CCEEEEEEcCCCCEEEEEE-------------------CCCcEEEEEcCCCCceeEEEEeecc-
Q psy18091 127 RSGQFECNATLEGHE-NEVKSVTWSKNGQFLATCS-------------------RDKSVWVWEVGEEDEYECAAVINAH- 185 (377)
Q Consensus 127 ~~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s~~-------------------~dg~v~~wd~~~~~~~~~~~~~~~~- 185 (377)
.+++........... .--..+.|+|+++.+++.. ...+|.+||+.+... ...+...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~---~~tI~vg~ 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR---IHSLTLGE 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE---EEEEESCT
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE---eeEEecCC
Confidence 988755333222222 1234578899999888885 368999999987532 2233321
Q ss_pred -ccceeEEEE--eeCCcEEEEee------CCCcEEEEecCcccccceeeeec--cc----------------CCcceEEE
Q psy18091 186 -IQDVKKVRF--HPFDNILASAS------YDDTVKLFKEDKAEADWINFATL--KS----------------HTSTVWSL 238 (377)
Q Consensus 186 -~~~v~~~~~--~~~~~~l~s~s------~dg~i~~~~~~~~~~~~~~~~~~--~~----------------h~~~v~~~ 238 (377)
......+.| +|+++++.+++ .+++|.+|.... ..|.....+ .. -......+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 122344555 99998777666 456777665432 122211110 00 02346789
Q ss_pred EEcCCCCeEEEe-eCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee-cCCC--------Cc----ceeEEEecccCCE
Q psy18091 239 AFDRIGSRLATC-SDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL-SGHH--------GR----TIYDISWCHLTDL 304 (377)
Q Consensus 239 ~~~~~~~~l~s~-s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~----~v~~~~~~~~~~~ 304 (377)
.++++|++|..+ -..+.|.++|+..+... +.+... .|.. +. .-..+.++++++.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~d~~~~------------~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDISNPFKP------------VLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECSSTTSC------------EEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCc------------EEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 999999987654 44789999997533211 111111 1100 01 2356888999999
Q ss_pred EEEEe
Q psy18091 305 IATAC 309 (377)
Q Consensus 305 l~~~~ 309 (377)
|+++.
T Consensus 395 LyVaN 399 (462)
T 2ece_A 395 VYVTN 399 (462)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88887
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.58 E-value=1e-05 Score=74.16 Aligned_cols=192 Identities=15% Similarity=0.166 Sum_probs=117.6
Q ss_pred EEEEEECCCCCEEEEEeCC------CcEEEeecccCCCcccceeeee-ccCc-CceeEEEECCCCCEEEEEE--------
Q psy18091 53 VWNVSWNPQGTMISSCGED------KNIRLWGKESFGNKFTAKAILS-DGHQ-RTIRETAWSPCGNFIASAS-------- 116 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~D------~~v~~W~~~~~~~~~~~~~~~~-~~h~-~~V~~~~~~~~~~~l~s~s-------- 116 (377)
-..+...|+| +++++..+ +.|.+.|.+++.. .. .+. .+.. .--+.+.|+|+++.+++..
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v--~~--~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP--LG--KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE--EE--ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE--EE--EEccCCCCccccceEEECCCCCEEEEccCcCccccc
Confidence 4567788999 77666665 7899998764321 11 111 1121 2234577899999888874
Q ss_pred -----------CCCcEEEEeCCCCceEEeEEecCccCCEEEEEE--cCCCCEEEEEE------CCCcEEEEEcCCCCcee
Q psy18091 117 -----------FDATTAVWDKRSGQFECNATLEGHENEVKSVTW--SKNGQFLATCS------RDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 117 -----------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~~------~dg~v~~wd~~~~~~~~ 177 (377)
.+..|.+||+.+++......+.........++| +|++++++.++ .+++|.+|.... ..+.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~ 293 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWN 293 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-Ccee
Confidence 378999999998765443333212223456666 99999877766 567888877654 3332
Q ss_pred EEEEe--ecc----------------ccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeec--ccC-----
Q psy18091 178 CAAVI--NAH----------------IQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATL--KSH----- 231 (377)
Q Consensus 178 ~~~~~--~~~----------------~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~--~~h----- 231 (377)
....+ ... ......+.++|++++|.++.. .+.|.+||+..... ......+ .+.
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~ 372 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRAD 372 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBC
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeecccc
Confidence 22221 110 134678899999998877665 67899999863321 1111111 111
Q ss_pred -------CcceEEEEEcCCCCeEEEee
Q psy18091 232 -------TSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 232 -------~~~v~~~~~~~~~~~l~s~s 251 (377)
...-..++++|+|++|+++.
T Consensus 373 ~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 373 HPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 01246788999999887665
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.58 E-value=3.7e-06 Score=82.87 Aligned_cols=196 Identities=10% Similarity=0.049 Sum_probs=110.2
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeecc----Cc-Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG----HQ-RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~----h~-~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+......... .. ..+ ..++. .+..++.++.|+.+..+|..+|+.....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 5677778888999999987543333221100000 00 001 11122 3567888889999999999999865444
Q ss_pred EecCccCCEEEEEEcC---CCCEEEEEE------CCCcEEEEEcCCCCceeEEEEeec----------------------
Q psy18091 136 TLEGHENEVKSVTWSK---NGQFLATCS------RDKSVWVWEVGEEDEYECAAVINA---------------------- 184 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~---~~~~l~s~~------~dg~v~~wd~~~~~~~~~~~~~~~---------------------- 184 (377)
....+......+..+| ++. ++.++ .++.|+.||.++.+..........
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 3320111111111112 444 44443 368999999988765433221100
Q ss_pred ------cccceeEEEEeeCCcEEEEeeCCCc-------------------EEEEecCcccccceeeeecccCC-------
Q psy18091 185 ------HIQDVKKVRFHPFDNILASASYDDT-------------------VKLFKEDKAEADWINFATLKSHT------- 232 (377)
Q Consensus 185 ------~~~~v~~~~~~~~~~~l~s~s~dg~-------------------i~~~~~~~~~~~~~~~~~~~~h~------- 232 (377)
+......+.++|..+.+..+..++. |..+|..+.+..|.. ....|.
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~--~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHY--QTTPGDAWDYTAT 304 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEE--ESSTTCCSCCCCC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEee--ecCCcccccccCC
Confidence 0011125778888888888887763 889998887776642 122221
Q ss_pred cceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 233 STVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 ~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
....-.....+|+ .++.++.+|.++++|..
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~ 337 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRA 337 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECC
Confidence 1111112222454 78899999999999854
No 228
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.49 E-value=9.6e-05 Score=65.54 Aligned_cols=190 Identities=7% Similarity=0.030 Sum_probs=113.1
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee--------c--------cCcCceeEEEECC-CCCEEEE
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS--------D--------GHQRTIRETAWSP-CGNFIAS 114 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~--------~--------~h~~~V~~~~~~~-~~~~l~s 114 (377)
.-.+++++++|.++.++..++.|..|+... .......... . ........+++.+ +++ |..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPN--SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTT--TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCC--CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 346788999999888888899999997652 1111100000 0 0113467889998 555 444
Q ss_pred EECCCcEEEEeCCCCceEEeE-EecC-ccCCEEEEEEcC-CCCEEEEEEC-----------------CCcEEEEEcCCCC
Q psy18091 115 ASFDATTAVWDKRSGQFECNA-TLEG-HENEVKSVTWSK-NGQFLATCSR-----------------DKSVWVWEVGEED 174 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~-~~~~-h~~~v~~l~~~~-~~~~l~s~~~-----------------dg~v~~wd~~~~~ 174 (377)
+...+.+..+|..++...... ...+ .......+++.+ +|+.+++-.. ++.|..+|.....
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 555556888887766433221 1111 123578899999 8987666432 3668888865442
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEE-EEeeCCCcEEEEecCcccc-cceeeeecccCCcceEEEEEcCCCCeEEEeeC
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNIL-ASASYDDTVKLFKEDKAEA-DWINFATLKSHTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~dg~i~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
. . .........+.++++|+++.+ ++-..++.|..|+...... ....+.. ... ...++++++|.++++...
T Consensus 177 ~-~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 177 T-T---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp E-E---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEE
T ss_pred E-E---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecC
Confidence 1 1 111112345678999998855 4556678899998764221 1111111 122 677899999987776654
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.45 E-value=0.00022 Score=64.53 Aligned_cols=273 Identities=7% Similarity=0.047 Sum_probs=142.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeecc----C--cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG----H--QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~----h--~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..++.++.++.|..+|.++....+... .... + ...+.. ....++..++.++.++.+..+|..+|+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVS--LAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEE--CCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeec--CccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 6678888889999999986532222211 1000 0 112221 11124567777888999999999999865444
Q ss_pred EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc---ceeEEEEeeCCcEEEEeeCCCcEEE
Q psy18091 136 TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ---DVKKVRFHPFDNILASASYDDTVKL 212 (377)
Q Consensus 136 ~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~dg~i~~ 212 (377)
...... ...... .+..++.++.++.|..+|..+......... ..... ....... .+..++.+..++.+..
T Consensus 130 ~~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 130 KVAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRGESAPTT--AFGAAVVGGDNGRVSA 202 (376)
T ss_dssp ECSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CCCCCCEE--ETTEEEECCTTTEEEE
T ss_pred eCCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecCCCCcEE--ECCEEEEEcCCCEEEE
Confidence 333211 111111 244778888999999999987754432211 11000 0011111 1456778888999999
Q ss_pred EecCcccccceeeeecc-cCC--cceEEEEEcC--CCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 213 FKEDKAEADWINFATLK-SHT--STVWSLAFDR--IGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~h~--~~v~~~~~~~--~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
+|....+..|....... +.. ..+..+.-.| .+..+..++.++.+..+|...... .|.. ..
T Consensus 203 ~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~-----------~w~~--~~-- 267 (376)
T 3q7m_A 203 VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQI-----------MWKR--EL-- 267 (376)
T ss_dssp EETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCE-----------EEEE--CC--
T ss_pred EECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcE-----------Eeec--cC--
Confidence 99877665553211100 000 0000000011 245677777888888887532210 1110 00
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
+ ....+. ..++.+..++.++.+..++....+ ..+.. .......+...... ++ .|..++.+|.|
T Consensus 268 --~-~~~~~~--~~~~~l~~~~~~g~l~~~d~~tG~-----~~w~~----~~~~~~~~~~~~~~--~~-~l~v~~~~g~l 330 (376)
T 3q7m_A 268 --G-SVNDFI--VDGNRIYLVDQNDRVMALTIDGGV-----TLWTQ----SDLLHRLLTSPVLY--NG-NLVVGDSEGYL 330 (376)
T ss_dssp --C-CEEEEE--EETTEEEEEETTCCEEEEETTTCC-----EEEEE----CTTTTSCCCCCEEE--TT-EEEEECTTSEE
T ss_pred --C-CCCCce--EECCEEEEEcCCCeEEEEECCCCc-----EEEee----cccCCCcccCCEEE--CC-EEEEEeCCCeE
Confidence 0 111222 236678888889999999865443 11111 00001112222222 23 56678889999
Q ss_pred EEEecccCC
Q psy18091 368 KLWQIKLEN 376 (377)
Q Consensus 368 ~iWd~~~~~ 376 (377)
..+|.+..+
T Consensus 331 ~~~d~~tG~ 339 (376)
T 3q7m_A 331 HWINVEDGR 339 (376)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999987653
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.45 E-value=2e-05 Score=77.58 Aligned_cols=156 Identities=7% Similarity=-0.044 Sum_probs=91.1
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEEC------CCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~------d~~i~iwd~~~~~~~~ 133 (377)
+..|+.++.|+.|..+|..+....+.............+. -.| .+..++.++. ++.|..+|..+|+...
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~---~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTIT---GAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCC---SCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccc---cCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 5678888999999999987543222221000000001111 111 2344444443 6899999999998654
Q ss_pred eEEecCcc------------------------------CCEEEEEEcCCCCEEEEEECCC-------------------c
Q psy18091 134 NATLEGHE------------------------------NEVKSVTWSKNGQFLATCSRDK-------------------S 164 (377)
Q Consensus 134 ~~~~~~h~------------------------------~~v~~l~~~~~~~~l~s~~~dg-------------------~ 164 (377)
........ .....+++.|++..++.+..++ +
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 43322111 1113567888888888877664 4
Q ss_pred EEEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCC---cEEEEeeCCCcEEEEecCccccc
Q psy18091 165 VWVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 165 v~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~s~s~dg~i~~~~~~~~~~~ 221 (377)
|..+|..+.+...... ...|. ....-+....+| ..++.++.+|.++++|....+..
T Consensus 285 v~AlD~~TG~~~W~~~-~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQ-ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp EEEECTTTCCEEEEEE-SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEECCCCCEEEEEe-cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 8889988876443222 11121 112223344466 68899999999999998776553
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=2e-05 Score=77.48 Aligned_cols=195 Identities=6% Similarity=0.021 Sum_probs=108.9
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccC-----cCce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGH-----QRTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h-----~~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+.......... ...+ ..+++ .+..++.++.|+.+..+|..+|+.....
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 45677777788899888765322222111000000 0001 11222 3567888889999999999999865443
Q ss_pred Eec-Ccc--CCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeecc---------------------
Q psy18091 136 TLE-GHE--NEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAH--------------------- 185 (377)
Q Consensus 136 ~~~-~h~--~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~--------------------- 185 (377)
... ... ..+...-.. .+..++.++. ++.|+.+|..+.+...........
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 322 100 111110001 2334555443 689999999887654332211110
Q ss_pred --------ccceeEEEEeeCCcEEEEeeCCC-------------------cEEEEecCcccccceeeeecccCC------
Q psy18091 186 --------IQDVKKVRFHPFDNILASASYDD-------------------TVKLFKEDKAEADWINFATLKSHT------ 232 (377)
Q Consensus 186 --------~~~v~~~~~~~~~~~l~s~s~dg-------------------~i~~~~~~~~~~~~~~~~~~~~h~------ 232 (377)
......+.++|+++.+..+..++ .|..+|....+..|.. ....|.
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~--~~~~~d~wd~~~ 311 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHY--QETPGDNWDYTS 311 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE--ESSTTCCSCCCC
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEE--ecCCCccccccc
Confidence 01123567888888888777664 4888888877766642 222221
Q ss_pred --cceEEEEEcCCC---CeEEEeeCCCcEEEEeee
Q psy18091 233 --STVWSLAFDRIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 --~~v~~~~~~~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
.++ -+....+| ..++.++.+|.+.++|..
T Consensus 312 ~~~p~-l~~~~~dG~~~~~l~~~~~~G~l~~lD~~ 345 (677)
T 1kb0_A 312 TQPMI-LADIKIAGKPRKVILHAPKNGFFFVLDRT 345 (677)
T ss_dssp CSCCE-EEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCCcE-EEecccCCcEeeEEEEECCCCEEEEEECC
Confidence 122 22333466 678899999999999854
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.38 E-value=4.1e-05 Score=75.48 Aligned_cols=155 Identities=8% Similarity=0.013 Sum_probs=90.0
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC---CCCEEEEEE-----CCCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP---CGNFIASAS-----FDATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~~~l~s~s-----~d~~i~iwd~~~~~~~~ 133 (377)
+..++.++.|+.|..+|.++....+..... .+......+..+| ++..++..+ .++.+..||..+|+...
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~---~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTR---ADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC---SCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCc---CCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 467888999999999998764333322110 0111111111122 344443322 36899999999998654
Q ss_pred eEEecCc-----------------------------cCCEEEEEEcCCCCEEEEEECCCc-------------------E
Q psy18091 134 NATLEGH-----------------------------ENEVKSVTWSKNGQFLATCSRDKS-------------------V 165 (377)
Q Consensus 134 ~~~~~~h-----------------------------~~~v~~l~~~~~~~~l~s~~~dg~-------------------v 165 (377)
......+ ......+++.|++..++.+..++. |
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v 277 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI 277 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 3321100 011125678888888888887764 9
Q ss_pred EEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCCc---EEEEeeCCCcEEEEecCcccc
Q psy18091 166 WVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 166 ~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~s~s~dg~i~~~~~~~~~~ 220 (377)
..+|.++.+...... ...|. ..........+++ .++.++.+|.++++|....+.
T Consensus 278 ~AlD~~TG~~~W~~~-~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 278 VAVNADTGEYVWHYQ-TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp EEEETTTCCEEEEEE-SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEccCCceeEeee-cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999998876543221 11121 1122223333554 788999999999999876654
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=0.00025 Score=60.74 Aligned_cols=201 Identities=11% Similarity=0.069 Sum_probs=121.7
Q ss_pred CEEEEEECCCCCEEEEEeC--CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCC
Q psy18091 52 RVWNVSWNPQGTMISSCGE--DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRS 128 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~ 128 (377)
....++|++++.+.++.+. +++|++.|..+. +... .+....+ .....+++. ++.| ++.-.++.+.++|..+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg--~v~~-~i~l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG--KVEN-IHKMDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC--CEEE-EEECCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC--CEEE-EEecCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCC
Confidence 3679999999766666654 679999998752 2211 1111122 122344454 4444 4455688999999988
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.+........ ... ...+++||+.++.+..++.|.+.|..+.........-.. .....+.+.+. ++..++....
T Consensus 96 ~~v~~~i~~g--~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 96 LSNIKNFTHQ--MKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp TEEEEEEECC--SSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcEEEEEECC--CCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 7654333222 111 233556887777777889999999887654332221111 11235677777 6766666666
Q ss_pred CCcEEEEecCcccc-cceeeeecc------c--CCcceEEEEEcCCCC-eEEEeeCCCcEEEEeeeC
Q psy18091 207 DDTVKLFKEDKAEA-DWINFATLK------S--HTSTVWSLAFDRIGS-RLATCSDDATVKIWKEYK 263 (377)
Q Consensus 207 dg~i~~~~~~~~~~-~~~~~~~~~------~--h~~~v~~~~~~~~~~-~l~s~s~D~~i~iw~~~~ 263 (377)
++.|.+.|....+. .+..+..+. . -......++|+|+++ .++++...+.+...++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 88999999876543 111111110 0 113567899999986 566777888988888653
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.38 E-value=0.00056 Score=60.52 Aligned_cols=245 Identities=8% Similarity=-0.011 Sum_probs=135.9
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec-----------------CccCCEEEEEEcC-CCCEEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE-----------------GHENEVKSVTWSK-NGQFLATCS 160 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-----------------~h~~~v~~l~~~~-~~~~l~s~~ 160 (377)
.-..++|+++++++.++..++.|..|+..++......... .....+..+++.+ +++ |+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 3456789999987788888899999998776543221100 0123578999997 554 55555
Q ss_pred CCCcEEEEEcCCCCceeEEE-Eee-ccccceeEEEEee-CCcEEEEeeC-----------------CCcEEEEecCcccc
Q psy18091 161 RDKSVWVWEVGEEDEYECAA-VIN-AHIQDVKKVRFHP-FDNILASASY-----------------DDTVKLFKEDKAEA 220 (377)
Q Consensus 161 ~dg~v~~wd~~~~~~~~~~~-~~~-~~~~~v~~~~~~~-~~~~l~s~s~-----------------dg~i~~~~~~~~~~ 220 (377)
..+.+..+|..... ..... ... ........+++.+ +|+++++-.. ++.+..++......
T Consensus 99 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 55668888865432 11111 111 1123467789999 8887776533 35677777643321
Q ss_pred cceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEec
Q psy18091 221 DWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWC 299 (377)
Q Consensus 221 ~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 299 (377)
. .+.........++++++|+.| ++.+..+.|..++..... .........+. + ...+...
T Consensus 178 ~-----~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~----------~~~~~~~~~~~---g--P~gi~~d 237 (322)
T 2fp8_A 178 T-----LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK----------KGTAEVLVKIP---N--PGNIKRN 237 (322)
T ss_dssp E-----EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT----------TTCEEEEEECS---S--EEEEEEC
T ss_pred E-----EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc----------CCccceEEeCC---C--CCCeEEC
Confidence 1 111111233568999999854 455667888888753210 00111111121 2 5667788
Q ss_pred ccCCEEEEEeC----------CCcEEEEEeCCCCCCCcceeeeeeeccccce-ecceeEEEecCCCCceEEEeeCCCcEE
Q psy18091 300 HLTDLIATACG----------DDAIRIFKENPEAGDSDMVSFDLVHTEHRAH-NQDVNCVAWNPVVPGMLASCSDDGDVK 368 (377)
Q Consensus 300 ~~~~~l~~~~~----------d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~laS~s~Dg~i~ 368 (377)
++++++++... .+.+..++. . +. .. ..+. ...+. ...++++++. ++.++++....+.|.
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~--~-G~--~~--~~~~-~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDE--F-GN--IL--EVIP-LPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVG 307 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECT--T-SC--EE--EEEE-CCTTTTTSCCCEEEEE--TTEEEEECSSCSEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECC--C-CC--EE--EEEE-CCCCCccccceEEEEe--CCEEEEeecCCCceE
Confidence 88876666544 344555532 1 11 11 0111 11111 2346667764 466777877888899
Q ss_pred EEecccC
Q psy18091 369 LWQIKLE 375 (377)
Q Consensus 369 iWd~~~~ 375 (377)
.+++..+
T Consensus 308 ~~~~~~~ 314 (322)
T 2fp8_A 308 ILVYDKK 314 (322)
T ss_dssp EEEC---
T ss_pred EEecccc
Confidence 9887643
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.37 E-value=9.5e-08 Score=87.05 Aligned_cols=181 Identities=12% Similarity=0.052 Sum_probs=91.7
Q ss_pred CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc
Q psy18091 108 CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 108 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
++..+++++.|+.+..||..+|+...... . +++.+..+..++..+++++.|+.|+.||..+.+.... ...+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~--~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~---~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLK--E--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK---LPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEE--C--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE---CSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEec--C--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee---eeccCc
Confidence 57789999999999999999998654333 2 3455555556777788888999999999876643321 111111
Q ss_pred c-ee-EEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCC
Q psy18091 188 D-VK-KVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPG 265 (377)
Q Consensus 188 ~-v~-~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~ 265 (377)
. +. ...+ ..+..+++++.++.++.||....+..|.. ..+. ...++|++..+++++.|+.|+.||.....
T Consensus 81 ~~~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~----~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 81 ELVQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTL----SSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred cccccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEe----cCCC----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 0 10 0001 13556778889999999998877655432 1121 13445678889999999999999864322
Q ss_pred CCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc---CCEEEEEeCCCcEEEEEeCCC
Q psy18091 266 NSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL---TDLIATACGDDAIRIFKENPE 322 (377)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~v~~~~~~ 322 (377)
. .|... ..+ ........+ .+.+++++.+|.+.+|+....
T Consensus 152 ~-----------~W~~~--~~~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 152 L-----------RWNAT--YFD-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp C-----------CCEEE--EEE-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred E-----------EEeEe--ccc-----ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 1 11111 000 011111221 156777888999999876543
No 236
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.34 E-value=7.2e-05 Score=73.40 Aligned_cols=116 Identities=10% Similarity=0.171 Sum_probs=74.0
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-CCcE
Q psy18091 55 NVSWNP-QGTMISSCGEDK-----------NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-DATT 121 (377)
Q Consensus 55 ~v~~~~-~g~~l~s~s~D~-----------~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d~~i 121 (377)
.+++.+ +|++++.||.+. .+.+||..+ ..+.........+.....++++.++++.++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST--GIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT--CCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC--CcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 456666 888888888654 477888764 3333322222223333445677889999998884 5689
Q ss_pred EEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CC-----CcEEEEEcCCC
Q psy18091 122 AVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-----KSVWVWEVGEE 173 (377)
Q Consensus 122 ~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d-----g~v~~wd~~~~ 173 (377)
.+||..+++......+..... -.+++..++++.++.|+ .+ ..+.+||..+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 999998876654433222111 13455567888888887 34 56889998764
No 237
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=6.5e-05 Score=74.86 Aligned_cols=204 Identities=14% Similarity=0.108 Sum_probs=108.9
Q ss_pred ccccC-CEEEEEEC-CCCCEEEEEeC-C----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC-
Q psy18091 47 KGHQG-RVWNVSWN-PQGTMISSCGE-D----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD- 118 (377)
Q Consensus 47 ~~h~~-~V~~v~~~-~~g~~l~s~s~-D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d- 118 (377)
++|.- .+...+|| |||++||-... + .+|+++|+++. .......+ ......++|+|+|+.|+....|
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g-~~~l~~~~-----~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP-SQTIADKV-----SGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT-TCCCCCCE-----EEECSCCEECSSTTEEEEEEECT
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC-CEeCCccc-----cCceeeEEEecCCCEEEEEEECC
Confidence 34543 67889999 99998874332 2 24999998753 01111111 1113467899999888777665
Q ss_pred ----CcEEEEeCCCCceEEeEEec-CccCCEEEEEEcCCCCEEEEEEC---CCcEEEEEcCCCC-ceeEEEEeeccccce
Q psy18091 119 ----ATTAVWDKRSGQFECNATLE-GHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEED-EYECAAVINAHIQDV 189 (377)
Q Consensus 119 ----~~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~~~~~-~~~~~~~~~~~~~~v 189 (377)
..|.++++.+++......+. ........+.|+|||++|+..+. ...|+++|+.+.. ...............
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 322 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR 322 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC
T ss_pred CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce
Confidence 25777788766422112222 22345678899999998776552 3467888887642 110011122222333
Q ss_pred eEEEEeeCCcEEEEeeCC--Cc--EEEEecCcccccceeeeecccCCc--ceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 190 KKVRFHPFDNILASASYD--DT--VKLFKEDKAEADWINFATLKSHTS--TVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 190 ~~~~~~~~~~~l~s~s~d--g~--i~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|+..+.+++....+ +. |..+++... ..|... +..|.. .+..+.+.. +.++++...|+..++|-
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~--li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHV--LVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTST-TCCCCE--EECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEE
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc-ccceee--EECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEE
Confidence 444444334444444443 34 444554422 222210 222332 345555542 34556777788766664
No 238
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.18 E-value=0.0023 Score=54.40 Aligned_cols=206 Identities=12% Similarity=0.165 Sum_probs=121.8
Q ss_pred ccccccCCEEEEEECCCCCEEEE-EeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 45 TLKGHQGRVWNVSWNPQGTMISS-CGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 45 ~l~~h~~~V~~v~~~~~g~~l~s-~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.+.|-.+.+..++|+|++..|++ ...++.|...|.. +. . .+.+-..+ ......+++.+++.++++.-.++.+.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~--g~-v-~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN--GD-L-IRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT--CC-E-EEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC--CC-E-EEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEE
Confidence 46666678999999998775554 5566667666654 22 2 12221122 245677888888877666545677888
Q ss_pred EeCCCCc-eE--EeEEec----CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCC---CCceeEEEE--e--eccccce
Q psy18091 124 WDKRSGQ-FE--CNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGE---EDEYECAAV--I--NAHIQDV 189 (377)
Q Consensus 124 wd~~~~~-~~--~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~---~~~~~~~~~--~--~~~~~~v 189 (377)
+++.... .. ....+. ..+.....++|.|.++.|+++.......+|.+.. ...+..... + ..+....
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 8765332 11 111111 2344578999999987776666655555655531 111211100 0 1134467
Q ss_pred eEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecc-cC------CcceEEEEEcCCCCeEEEeeCCCcEEEE
Q psy18091 190 KKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLK-SH------TSTVWSLAFDRIGSRLATCSDDATVKIW 259 (377)
Q Consensus 190 ~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-~h------~~~v~~~~~~~~~~~l~s~s~D~~i~iw 259 (377)
..++++|.. .+++....+..+..+|....... ...+. +. -..-..++|+++|+.+++ +.-+.+..+
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~---~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG---EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCCEEE---EEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEE---EEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 899999975 56666777777888887644222 22222 11 124578999999985555 666655554
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.16 E-value=4.6e-05 Score=68.88 Aligned_cols=234 Identities=9% Similarity=-0.038 Sum_probs=131.3
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEeecccCCCcccceeeeec--cC---cCceeEEEECCCCCEEEEEEC--
Q psy18091 55 NVSWNPQGTMISSCG----------EDKNIRLWGKESFGNKFTAKAILSD--GH---QRTIRETAWSPCGNFIASASF-- 117 (377)
Q Consensus 55 ~v~~~~~g~~l~s~s----------~D~~v~~W~~~~~~~~~~~~~~~~~--~h---~~~V~~~~~~~~~~~l~s~s~-- 117 (377)
.+.++|||++++.+. .+++|.+||..+.. .... +... ++ ...-..++++|+|++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~-I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIAD-IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEE-EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEE-EECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 799999999888776 37889999987532 1111 1111 00 123456789999999998875
Q ss_pred CCcEEE--EeCCCCceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcCC----CCceeEE--EEeeccccc
Q psy18091 118 DATTAV--WDKRSGQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVGE----EDEYECA--AVINAHIQD 188 (377)
Q Consensus 118 d~~i~i--wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~~----~~~~~~~--~~~~~~~~~ 188 (377)
+..+.+ +|..+ .. .....+ . ....|++ +.+++.+.|+.+.+.|+.. ....... ..+.....+
T Consensus 146 ~~~v~V~~iD~~t--v~-~i~v~~---~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 146 SAAAGLSVPGASD--DQ-LTKSAS---C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp SCEEEEEETTTEE--EE-EEECSS---C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred CCeEEEEEEchhh--ce-EEECCC---c---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 467888 99866 11 111111 1 1123444 3456677888888888765 2111100 001111122
Q ss_pred eeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecc-----cCC---cceEEEEEcCCCCeEEEeeC--------
Q psy18091 189 VKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLK-----SHT---STVWSLAFDRIGSRLATCSD-------- 252 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~-----~h~---~~v~~~~~~~~~~~l~s~s~-------- 252 (377)
. . .+.+..++..+. +.+.+.|.............+. .+. .....++|+++++++..+..
T Consensus 217 ~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 217 A---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp E---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred c---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 2 2 556666655556 8999998754321111000000 010 11112679999987765432
Q ss_pred -CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCC-EEEEEe-CCCcEEEEEeCCC
Q psy18091 253 -DATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTD-LIATAC-GDDAIRIFKENPE 322 (377)
Q Consensus 253 -D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~v~~~~~~ 322 (377)
++.+.++|+.... .+.++.. +.....+.++++++ ++++.. .++.+.+++..+.
T Consensus 292 ~~~~~~ViD~~t~~---------------vv~~i~v--g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 292 AAENTSSVTASVGQ---------------TSGPISN--GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp CEEEEEEEESSSCC---------------EEECCEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCEEEEECCCCe---------------EEEEEEC--CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 2356699864321 1222221 23578899999987 556666 5999999987543
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.13 E-value=0.00092 Score=56.71 Aligned_cols=189 Identities=14% Similarity=0.137 Sum_probs=110.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKR 127 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~ 127 (377)
.....+.|+ ++.+..+.|.+| .|+..|.++. +.... +... .........+.++.|. ....++.+.+||..
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg--kv~~~-~~l~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESG--KTLQQ-IELG---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTC--CEEEE-EECC---TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCC--cEEEE-EecC---CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 345788998 678888888877 8999998752 22111 1111 1222222222344444 44568899999999
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee-c-cccceeEEEEeeCCcEEEEee
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN-A-HIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~s 205 (377)
+.+........+ ....++++++.|+....++.|.++|..+........... . ....++.+.+. +|..++..-
T Consensus 116 t~~~~~ti~~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 116 NLRQVRSFNYDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp TCCEEEEEECSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred cCcEEEEEECCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 887654444433 112333577777777778889999988765433222211 1 11334556665 676666665
Q ss_pred CCCcEEEEecCccccc-ceeeeeccc-------CCcceEEEEEcCCCCeEEEeeC
Q psy18091 206 YDDTVKLFKEDKAEAD-WINFATLKS-------HTSTVWSLAFDRIGSRLATCSD 252 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~-~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~s~ 252 (377)
.+..|.+.|....+.. +..+..+.. -....+.++|+|+++.|...+.
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6788999988765431 111211111 1234578999998776665543
No 241
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.12 E-value=0.0038 Score=54.73 Aligned_cols=198 Identities=15% Similarity=0.118 Sum_probs=116.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC--cEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA--TTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~ 128 (377)
.....++|+++|.++++-..++.|..||.+. . .. .... -......+++.++|+++++..... .+..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g--~-~~--~~~~--~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG--N-QQ--IHAT--VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC--C-EE--EEEE--CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC--c-eE--EEEe--CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4567899999999888877889999998652 1 11 1111 124578899999999766554332 366677777
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe--------eccccceeEEEEeeCCc-
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI--------NAHIQDVKKVRFHPFDN- 199 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~- 199 (377)
+++.....+. .......++..+++..+++-..++.|+.+|...... ...... .......+.+ +|+++
T Consensus 105 g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 105 GTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp SCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 7765433332 122344555555554444444688888888754310 110000 0111223445 78775
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
++++-...+.|..++.... ........+. .......++++++|.++++....+.|.+++.
T Consensus 181 lyv~d~~~~~I~~~~~~~~-g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDST-DKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEEETTTTEEEEEEBCTT-SCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred EEEEeCCCCEEEEEEeCCC-CCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 4556666788999987641 1100001110 0123456889999998888887888988863
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.12 E-value=0.0047 Score=55.69 Aligned_cols=261 Identities=9% Similarity=0.027 Sum_probs=137.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCcee-EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIR-ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
+..++.++.|+.|..+|.++....+... . . ..+. .... .+..++.++.++.+..+|..+|+..........
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~----~-~-~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTK----V-A-GEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEE----C-S-SCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEe----C-C-CceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 4577788889999999987532222111 0 1 1111 1111 245777788899999999999876543332211
Q ss_pred cCC---EEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccc-----ceeEEEEee--CCcEEEEeeCCCcE
Q psy18091 141 ENE---VKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQ-----DVKKVRFHP--FDNILASASYDDTV 210 (377)
Q Consensus 141 ~~~---v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~--~~~~l~s~s~dg~i 210 (377)
... ...... .+..++.+..++.+..+|..+........ ...... .+..+.-.| .+..+..++.++.+
T Consensus 175 ~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l 251 (376)
T 3q7m_A 175 SLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNL 251 (376)
T ss_dssp ----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEE-CCC-----------CCCCCCEEETTEEEEECTTSCE
T ss_pred ceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCCcEEECCEEEEEecCcEE
Confidence 000 011111 24467778889999999988765433211 110000 000000111 25667777889999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..+|....+..|... ......+.. .+..+..++.++.+..+|...... .|. ......
T Consensus 252 ~~~d~~tG~~~w~~~------~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~-----------~w~----~~~~~~ 308 (376)
T 3q7m_A 252 TALDLRSGQIMWKRE------LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVT-----------LWT----QSDLLH 308 (376)
T ss_dssp EEEETTTCCEEEEEC------CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCE-----------EEE----ECTTTT
T ss_pred EEEECCCCcEEeecc------CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcE-----------EEe----ecccCC
Confidence 999987766554321 112333333 366777888888998888532211 111 100000
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceeccee-EEEecCCCCceEEEeeCCCcEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVN-CVAWNPVVPGMLASCSDDGDVKL 369 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~laS~s~Dg~i~i 369 (377)
..+..... .++.|+.++.+|.+.+++....+. .+.. . .....+. ..... ++ .|..++.||.|..
T Consensus 309 ~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~-----~~~~----~-~~~~~~~~~~~~~--~~-~l~v~~~~G~l~~ 373 (376)
T 3q7m_A 309 RLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRF-----VAQQ----K-VDSSGFQTEPVAA--DG-KLLIQAKDGTVYS 373 (376)
T ss_dssp SCCCCCEE--ETTEEEEECTTSEEEEEETTTCCE-----EEEE----E-CCTTCBCSCCEEE--TT-EEEEEBTTSCEEE
T ss_pred CcccCCEE--ECCEEEEEeCCCeEEEEECCCCcE-----EEEE----e-cCCCcceeCCEEE--CC-EEEEEeCCCEEEE
Confidence 01111111 256788888999999998655431 1110 0 0011111 11122 34 4667889999999
Q ss_pred Ee
Q psy18091 370 WQ 371 (377)
Q Consensus 370 Wd 371 (377)
|+
T Consensus 374 ~~ 375 (376)
T 3q7m_A 374 IT 375 (376)
T ss_dssp EE
T ss_pred Ee
Confidence 87
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.07 E-value=0.0018 Score=55.45 Aligned_cols=152 Identities=7% Similarity=0.036 Sum_probs=89.4
Q ss_pred eeEEEECCCCCEEEEEEC--CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 100 IRETAWSPCGNFIASASF--DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
...++|+|++...++.+. ++.|+++|+.+++......+..+ .....+++. .++.+++.-.++.+.++|..+.....
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 468899998755555543 58999999999987654444332 223455554 23444555567899999988764332
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCC
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
.+..... ....++++++.+.++..++.+.++|....+.. .......+. ...+.+.|. +|..++....++
T Consensus 101 ---~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~--~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 101 ---NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLI--KKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp ---EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred ---EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEE--EEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 2322111 12346678877777777889999998654321 001111111 135566666 555555554566
Q ss_pred cEEEEee
Q psy18091 255 TVKIWKE 261 (377)
Q Consensus 255 ~i~iw~~ 261 (377)
.|.+.|.
T Consensus 173 ~V~vID~ 179 (266)
T 2iwa_A 173 CIARISA 179 (266)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 6766663
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.06 E-value=0.0043 Score=53.06 Aligned_cols=188 Identities=12% Similarity=0.067 Sum_probs=107.5
Q ss_pred CEEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCCCceEEeEEecCc
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRSGQFECNATLEGH 140 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~h 140 (377)
++|+.+.. +.|+.++++..... .....++. ........++|++++..|. +-..++.|..++...+... ......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~ 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQD 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECC
Confidence 34444333 46787877632111 01111111 1123567889999765554 4445788999998765432 222222
Q ss_pred cCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-EEEeeC--CCcEEEEecC
Q psy18091 141 ENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASASY--DDTVKLFKED 216 (377)
Q Consensus 141 ~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~--dg~i~~~~~~ 216 (377)
......+++.|++..++.+ ...+.|.++++...... ............++++|++.. +++... .+.|..++..
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~---~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR---VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE---EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 3567899999976555544 45678999998654321 112222245678999996554 444433 4678777765
Q ss_pred cccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCCCcEEEEee
Q psy18091 217 KAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDDATVKIWKE 261 (377)
Q Consensus 217 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~iw~~ 261 (377)
..... .+. .........+++++++..| ++....+.|..++.
T Consensus 155 g~~~~--~~~--~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 155 GTNRR--ILA--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp SCCCE--EEE--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCcE--EEE--ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 32211 111 1122356789999986654 56666788888874
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.05 E-value=0.00059 Score=60.20 Aligned_cols=266 Identities=12% Similarity=0.059 Sum_probs=141.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..+.++...++|.+.+ ++.+ |..+|.. +....... ..........+. +..+..++.++.+..+|.. ++
T Consensus 60 ~~~~~~~~~~~g~l~v-~t~~--l~~~d~~--g~~~~~~~----~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~ 127 (330)
T 3hxj_A 60 IIECRPSIGKDGTIYF-GSDK--VYAINPD--GTEKWRFD----TKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GT 127 (330)
T ss_dssp EEEECCEETTTTEECC-SSCE--EEEECCC--GGGGGGSC----C-----CCEEEE--TTEEEEECTTSEEEEECTT-SC
T ss_pred CcccceEEecCCcEEE-ecCc--EEEECCC--CcEEEEEE----CCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CC
Confidence 4456777777776444 4444 7777752 11111110 111112222222 4566778888999999987 65
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
.... ...+...+.++...+++. +..++.++.|..+|.. ..... ........+..+...+++.+++.. +.+
T Consensus 128 ~~~~--~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~---~~~~~~~~~~~~~~d~~g~l~v~t---~~l 197 (330)
T 3hxj_A 128 EKWR--FKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW---RFKTNDAITSAASIGKDGTIYFGS---DKV 197 (330)
T ss_dssp EEEE--EECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE---EEECSSCCCSCCEECTTCCEEEES---SSE
T ss_pred EEEE--EcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE---EEecCCCceeeeEEcCCCEEEEEe---CEE
Confidence 4332 233344455666666776 5557778999999987 43222 122233445566666677655544 888
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..++ ......|. .......+.++..+++|. +..++.++.+..++.. +. ..+ .+... .
T Consensus 198 ~~~d-~~g~~~~~----~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~--g~----------~~~----~~~~~-~ 254 (330)
T 3hxj_A 198 YAIN-PDGTEKWN----FYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD--GT----------EKW----RFKTG-K 254 (330)
T ss_dssp EEEC-TTSCEEEE----ECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT--SC----------EEE----EEECS-S
T ss_pred EEEC-CCCcEEEE----EccCCcceeceEECCCCe-EEEEcCCCeEEEECCC--CC----------EeE----EeeCC-C
Confidence 8888 43333221 222334567777887765 4556667777777521 10 011 11110 1
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcEEEE
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLW 370 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iW 370 (377)
..+..+...+ ++.|..++.++.+..++. . +. ..+.. ......+.++...+ ++. |.-|+.+|.+++-
T Consensus 255 ~~~~~~~~~~-~g~l~v~t~~ggl~~~d~-~--g~---~~~~~-----~~~~~~~~~~~~d~-~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 255 RIESSPVIGN-TDTIYFGSYDGHLYAINP-D--GT---EKWNF-----ETGSWIIATPVIDE-NGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp CCCSCCEECT-TSCEEEECTTCEEEEECT-T--SC---EEEEE-----ECSSCCCSCCEECT-TCC-EEEECTTSCEEEE
T ss_pred CccccceEcC-CCeEEEecCCCCEEEECC-C--Cc---EEEEE-----EcCCccccceEEcC-CCE-EEEEcCCCeEEEE
Confidence 1122233333 346667778888888863 1 11 11111 01123466667766 344 4568899999998
Q ss_pred ecccC
Q psy18091 371 QIKLE 375 (377)
Q Consensus 371 d~~~~ 375 (377)
..+.+
T Consensus 321 ~~~~~ 325 (330)
T 3hxj_A 321 FNLEH 325 (330)
T ss_dssp EC---
T ss_pred ecccc
Confidence 77654
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.04 E-value=0.0036 Score=53.12 Aligned_cols=188 Identities=12% Similarity=0.027 Sum_probs=112.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
.....+.|+. +.+..+.+.+|.|+..|.++. +.... + .... ..-..+++.. ++..+....++.+.+||..+.+
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tg--kv~~~-~-l~~~-~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESA--QPVWM-E-RLGN-IFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCS--SCSEE-E-ECTT-CCEEEEEECS-SCEEEEESSSCEEEEEETTTTE
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCC--cEEeE-E-CCCC-cceeEEEEeC-CEEEEEEccCCEEEEEECCcCc
Confidence 3457888874 677889999999999998753 22222 2 2221 1112345543 2444445678999999999887
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeCCC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
........+. -..++ ++++.|+.+..++.|.++|..+............ ....++.+.|. +|..++..-.+.
T Consensus 128 ~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 128 RERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp EEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred EEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 6544444332 23333 5778888888899999999887654332222111 11234566666 666666665678
Q ss_pred cEEEEecCcccc-cceeeeecc--------cCCcceEEEEEcCCCCeEEEee
Q psy18091 209 TVKLFKEDKAEA-DWINFATLK--------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 209 ~i~~~~~~~~~~-~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.|.+.|....+. .+..+..+. .-....+.++++|.++.|...+
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 899999876543 122222111 1123567899999766554433
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.03 E-value=0.00056 Score=64.88 Aligned_cols=200 Identities=8% Similarity=0.009 Sum_probs=115.8
Q ss_pred CCCEEEEEEC-CCcEEEEeCCCCceEEeEEecCccCCEEEEEE-c-CCCCEEEEEEC------------------CCcEE
Q psy18091 108 CGNFIASASF-DATTAVWDKRSGQFECNATLEGHENEVKSVTW-S-KNGQFLATCSR------------------DKSVW 166 (377)
Q Consensus 108 ~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~-~-~~~~~l~s~~~------------------dg~v~ 166 (377)
||+++..... ++.|.+.|+.+.+......+.. ......+++ + |++++++++++ ++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 7787766554 5669999999876543334432 245788888 5 99999988863 34677
Q ss_pred EEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC---------------cEEEE------------------
Q psy18091 167 VWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD---------------TVKLF------------------ 213 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg---------------~i~~~------------------ 213 (377)
+.|..+.... ..+.... ....++++|+++++.+.+.+. .+.++
T Consensus 179 vID~~t~~v~---~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVA---WQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEE---EEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEE---EEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 8888764322 1222111 334577899999988887654 23333
Q ss_pred -----ecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEeeeCCCC--CCCCCCCCCCCcEEEEEee
Q psy18091 214 -----KEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKEYKPGN--SAGIPTPDNDSVWKCVCTL 285 (377)
Q Consensus 214 -----~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~ 285 (377)
|........ ....+ .-......+.++|+|++++ ++..+.+|.++|..+... ...+ .+. . ......
T Consensus 255 ~V~VID~~~~~~~~-~~~~I-pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l-~~~--~--~v~~~v 327 (595)
T 1fwx_A 255 GVKVVDGRKEASSL-FTRYI-PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA-DPR--S--AVVAEP 327 (595)
T ss_dssp TEEEEECSGGGCCS-SEEEE-EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-CGG--G--GEEECC
T ss_pred cEEEEeCcccCCce-eEEEE-ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc-Ccc--c--ceEEEc
Confidence 332210000 00000 0011234688999999766 455689999999753210 0000 000 0 001111
Q ss_pred cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCC
Q psy18091 286 SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENP 321 (377)
Q Consensus 286 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~ 321 (377)
. -+..-..++|++++....+.-.|+.+.+|++..
T Consensus 328 ~--vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 E--LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp B--CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred C--CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1 234567889999985555666799999999754
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.94 E-value=0.0016 Score=61.87 Aligned_cols=193 Identities=15% Similarity=0.124 Sum_probs=118.9
Q ss_pred CCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEE-C-CCCCEEEEEEC------------------C
Q psy18091 60 PQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW-S-PCGNFIASASF------------------D 118 (377)
Q Consensus 60 ~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~-~~~~~l~s~s~------------------d 118 (377)
+||++++.+.. +.+|.+-|+++. +...++.-........+++ + |++++++.+++ +
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~----~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVM----KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT----EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCc----eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 37887766554 456888888742 2222222222345677787 5 89999988852 4
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC-----------------------------------
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----------------------------------- 163 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----------------------------------- 163 (377)
+.+.+.|..+.+........+ ....++++|+|+++++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred ceEEEEECCCCeEEEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 568888988876544333333 345678899999999888653
Q ss_pred ---cEEEEEcCC--CCceeEEEEeeccccceeEEEEeeCCcEEEEe-eCCCcEEEEecCccccc--------ceeeeecc
Q psy18091 164 ---SVWVWEVGE--EDEYECAAVINAHIQDVKKVRFHPFDNILASA-SYDDTVKLFKEDKAEAD--------WINFATLK 229 (377)
Q Consensus 164 ---~v~~wd~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~dg~i~~~~~~~~~~~--------~~~~~~~~ 229 (377)
.|.+.|.++ ...+ ...+.. .....++.++|+|++++++ -.+..+.++|..+.... .......
T Consensus 252 ~i~~V~VID~~~~~~~~~--~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v- 327 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLF--TRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP- 327 (595)
T ss_dssp EETTEEEEECSGGGCCSS--EEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-
T ss_pred EECcEEEEeCcccCCcee--EEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-
Confidence 244445443 1110 111111 1234568899999876555 46889999998754210 0001111
Q ss_pred cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeC
Q psy18091 230 SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYK 263 (377)
Q Consensus 230 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~ 263 (377)
.-....+.++|+++|...++.-.|++|.+|+...
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 1234567899999995556778899999999643
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.91 E-value=0.024 Score=56.71 Aligned_cols=292 Identities=9% Similarity=0.108 Sum_probs=160.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeee----eccCcCceeEEEECCCCCEEEEEECCCcEEEEeC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAIL----SDGHQRTIRETAWSPCGNFIASASFDATTAVWDK 126 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~----~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~ 126 (377)
..|+++...++|.+.+.. .+ -|.+|+... ..+...... ..-....|.++...++|..- .|..++-+..|+.
T Consensus 263 ~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~ 337 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGT-FN-DLNIYHEGT--DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHP 337 (795)
T ss_dssp SBEEEEEECTTSCEEEEE-SS-CEEEEETTT--TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECG
T ss_pred CeEEEEEEcCCCCEEEEe-CC-hhheEcCCC--CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCC
Confidence 569999999998866543 44 488887652 111110000 00123568999988888754 4666677888987
Q ss_pred CCCceEEeEEec----CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe------eccccceeEEEEee
Q psy18091 127 RSGQFECNATLE----GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI------NAHIQDVKKVRFHP 196 (377)
Q Consensus 127 ~~~~~~~~~~~~----~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~------~~~~~~v~~~~~~~ 196 (377)
.++.+....... -....|.++...++|...+ |+.++-|..|+..+.. +...... ......|.++...+
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~ 415 (795)
T 4a2l_A 338 IRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQR-FTSYTLQEDESARGIGSNNIKAVYVDE 415 (795)
T ss_dssp GGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCC-EEEECCC------CCSCSCEEEEEEET
T ss_pred CcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCc-EEEEecCCCCcccCCCCccEEEEEEcC
Confidence 665443221111 0235699999988887655 6667678999876542 1111000 01134688888888
Q ss_pred CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCC
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDND 276 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~ 276 (377)
+++.|..|+.++-+..++.............-......|.++..+++|.+.+.. .+ .+..|+.....
T Consensus 416 ~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~----------- 482 (795)
T 4a2l_A 416 KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS----------- 482 (795)
T ss_dssp TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE-----------
T ss_pred CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe-----------
Confidence 887566777777788898764432111000001234579999998888765543 44 47777632110
Q ss_pred CcEEEEEee---cCCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCC
Q psy18091 277 SVWKCVCTL---SGHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPV 353 (377)
Q Consensus 277 ~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 353 (377)
+...... .+-....|.++...+.+.+.+... +.+..|+..... . .+.............|.++...+.
T Consensus 483 --~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~----~-~~~~~~~~~~l~~~~i~~i~~d~~ 553 (795)
T 4a2l_A 483 --FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLD----I-QKASILPVSNVTKLFTNCIYEASN 553 (795)
T ss_dssp --EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTE----E-EECCCSCSCGGGGSCEEEEEECTT
T ss_pred --EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCe----E-EEecCCCCCCCCCCeeEEEEECCC
Confidence 0000000 000124677887777777666554 556677654321 0 000000011123457889988874
Q ss_pred CCceEEEeeCCCcEEEEeccc
Q psy18091 354 VPGMLASCSDDGDVKLWQIKL 374 (377)
Q Consensus 354 ~~~~laS~s~Dg~i~iWd~~~ 374 (377)
+.+.+++ ..| |..||...
T Consensus 554 -g~lWigT-~~G-l~~~d~~~ 571 (795)
T 4a2l_A 554 -GIIWVGT-REG-FYCFNEKD 571 (795)
T ss_dssp -SCEEEEE-SSC-EEEEETTT
T ss_pred -CCEEEEe-CCC-ceeECCCC
Confidence 4444333 334 66677654
No 250
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.0083 Score=51.23 Aligned_cols=195 Identities=7% Similarity=-0.038 Sum_probs=116.2
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEE-EEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIA-SASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~-s~s~d~~i~iwd~~~ 128 (377)
.....++|++++. +.++....+.|..++.+. ... ..+. .........+++++++..|. +-...+.|.+++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--~~~--~~~~-~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHG--GEP--TTII-RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSS--CCC--EEEE-CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCC--CCc--EEEE-ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 3567999999655 455666678899998763 211 1122 12224568899999755544 445567899998864
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC---CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEe
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR---DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASA 204 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~ 204 (377)
..... ...........++++|++.+++.+.. .+.|..+++..... . ............++++|++. ++++-
T Consensus 111 ~~~~~--~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~--~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 111 TQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-R--ILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp CSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-E--EEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred CCEEE--EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-E--EEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 43221 12222246789999997666655554 36788888764322 1 11222334577899999765 55666
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..++....... .+. .. ......++.. .+..+++....+.|..++.
T Consensus 186 ~~~~~I~~~~~~g~~~~--~~~--~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 186 AGTHRAECLNPAQPGRR--KVL--EG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp TTTTEEEEEETTEEEEE--EEE--EC-CCSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEecCCCceE--EEe--cC-CCCceEEEEe-CCEEEEEECCCCeEEEEeC
Confidence 66788999988643221 111 11 1223456654 3445555556678888764
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.89 E-value=0.001 Score=66.23 Aligned_cols=201 Identities=13% Similarity=0.128 Sum_probs=107.4
Q ss_pred ceeEEEEC-CCCCEEEEE-ECCC----cEEEEeCCCC-ceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEE
Q psy18091 99 TIRETAWS-PCGNFIASA-SFDA----TTAVWDKRSG-QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVW 166 (377)
Q Consensus 99 ~V~~~~~~-~~~~~l~s~-s~d~----~i~iwd~~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~ 166 (377)
.+...+|| |+|++|+-+ +.+| .|.++|+.++ +.... .+. .....++|+||++.|+....+ ..|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 56788999 999988744 3333 4999999888 52111 111 112467899999877766654 2577
Q ss_pred EEEcCCCCceeEEEEee-ccccceeEEEEeeCCcEEEEeeC---CCcEEEEecCcccccceeeeec-ccCCcceEEEEEc
Q psy18091 167 VWEVGEEDEYECAAVIN-AHIQDVKKVRFHPFDNILASASY---DDTVKLFKEDKAEADWINFATL-KSHTSTVWSLAFD 241 (377)
Q Consensus 167 ~wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~---dg~i~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~ 241 (377)
.+++.+...... .... ........+.|+|++++|+..+. ...|.++++......+ .+..+ .......+++.|+
T Consensus 251 ~~~lgt~~~~~~-lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 251 RHVMGKLQSEDV-CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHN-TLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEETTSCGGGCE-EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCC-CEEESSCCCTTCCEEEEEE
T ss_pred EEECCCCchhcE-EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCc-eeEEeecCCCCceEEEeee
Confidence 788866532111 1122 22233557889999998876653 3357777776542222 00112 2234455666655
Q ss_pred CCCCeEE-EeeCC--CcEEEEeeeCC--CCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEE
Q psy18091 242 RIGSRLA-TCSDD--ATVKIWKEYKP--GNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRI 316 (377)
Q Consensus 242 ~~~~~l~-s~s~D--~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v 316 (377)
. |..|+ ....+ +..+||..... +.... . .+.......+..+.+. .+.++++...++..++
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~------------~-li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l 393 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSH------------V-LVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRI 393 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTCCCC------------E-EECCCSSEEEEEEEEC-SSEEEEEEEETTEEEE
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCccccee------------e-EECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEE
Confidence 4 55444 43333 34455543211 11000 0 0111112244555554 2346667777787777
Q ss_pred EEeC
Q psy18091 317 FKEN 320 (377)
Q Consensus 317 ~~~~ 320 (377)
+...
T Consensus 394 ~~~d 397 (751)
T 2xe4_A 394 WTMM 397 (751)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.0042 Score=52.65 Aligned_cols=194 Identities=10% Similarity=0.040 Sum_probs=107.3
Q ss_pred eeEEEECCCCCEEEEEECCC--cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCce
Q psy18091 100 IRETAWSPCGNFIASASFDA--TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~ 176 (377)
...+.|+ ++.+..+.+.+| .|+.+|+.+++......+... ..-..++. +++.+. ..-.++.+.+||..+....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEE
Confidence 4678888 667777777766 899999999987655444321 11233444 344444 4446889999999876543
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCC
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D 253 (377)
.. +.... ....+.+++..|+.+..++.|.++|....+.. ......... ..+..+.|. +|..++..-.+
T Consensus 121 ~t---i~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~--~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 121 RS---FNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPV--RTITVTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp EE---EECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EE---EECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEE--EEEEeccCCccccccceeEEE-CCEEEEEEccC
Confidence 32 22211 22344567777777777888999998754421 011111111 234456775 56666655567
Q ss_pred CcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
+.|.+.|.....-...+........ ...........+.|+++|.++.|++.+.
T Consensus 192 ~~I~vIDp~tG~V~~~Id~~~L~~~----~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 192 NKIVRIDPETGKVTGIIDLNGILAE----AGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SEEEEECTTTCBEEEEEECTTGGGG----SCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCcEEEEEECCcCccc----cccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7888887532211100000000000 0000011235688999998887776654
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.86 E-value=0.0096 Score=50.55 Aligned_cols=207 Identities=12% Similarity=0.168 Sum_probs=123.3
Q ss_pred cCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCC
Q psy18091 95 GHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEE 173 (377)
Q Consensus 95 ~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~ 173 (377)
+-...+..++|+|+++.| +....++.|...|.. ++......+.+. .....+++.+++.++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 445679999999976654 457778888888887 665544444443 46889999988887777667788999988765
Q ss_pred CceeEEEEee------ccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccc--cceeeee----cccCCcceEEEEEc
Q psy18091 174 DEYECAAVIN------AHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA--DWINFAT----LKSHTSTVWSLAFD 241 (377)
Q Consensus 174 ~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~--~~~~~~~----~~~h~~~v~~~~~~ 241 (377)
.......... ..+.....++|+|.++.|.++.+.....+|....... ....... -..+...+.+++++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 5322222221 2344568999999998777777766666665541100 0000000 01123356789999
Q ss_pred CCCCeE-EEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec-CCCC-----cceeEEEecccCCEEEEEeCCCcE
Q psy18091 242 RIGSRL-ATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS-GHHG-----RTIYDISWCHLTDLIATACGDDAI 314 (377)
Q Consensus 242 ~~~~~l-~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i 314 (377)
|....| +.......+..+|.. ++ ..-...+. +.++ ..-..|++.+++++.+ +++-+.+
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~--g~------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~ 246 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV--GE------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRF 246 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT--CC------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEE
T ss_pred CCCCeEEEEECCCCeEEEEcCC--CC------------EEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceE
Confidence 875544 445555666666632 11 01111222 1111 2456788888887444 4676666
Q ss_pred EEEE
Q psy18091 315 RIFK 318 (377)
Q Consensus 315 ~v~~ 318 (377)
.+|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.85 E-value=0.013 Score=51.83 Aligned_cols=283 Identities=7% Similarity=0.104 Sum_probs=140.9
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
...+.+|.|.+++..++ .+.++.| +.....+..+.............+.+++|++ +..++ ++.++.|..- ...|
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLHT-TDGG 108 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEEE-SSTT
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEEE-CCCC
Confidence 34799999988877777 4567755 3223323333322111111234688888886 44444 4556644432 2223
Q ss_pred c-eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 Q-FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~-~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
+ .........+.+.+..+.+.++++.++.+ .++.|.. .......+... .......+..+.+.|++.+++.+. +|
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~--~~~~~~~~~~~~~~~~~~~~~~g~-~G 183 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQAL--VQEAIGVMRNLNRSPSGEYVAVSS-RG 183 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEE--ECSCCCCEEEEEECTTSCEEEEET-TS
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEe--ecCCCcceEEEEEcCCCcEEEEEC-CC
Confidence 2 22111111233457788877666655544 5665432 11223333322 223345678889999887776664 44
Q ss_pred cEEE-EecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecC
Q psy18091 209 TVKL-FKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSG 287 (377)
Q Consensus 209 ~i~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
.+.. .|. ....|..+. ......+..+.+.+++..+ .++.+|.+++.+. ..+. .|.....-.-
T Consensus 184 ~~~~S~d~--gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~-D~G~-----------tW~~~~~~~~ 246 (327)
T 2xbg_A 184 SFYSTWEP--GQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDP-DNSE-----------NWGELLSPLR 246 (327)
T ss_dssp SEEEEECT--TCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEET-TEEE-----------EECCCBCTTS
T ss_pred cEEEEeCC--CCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecC-CCCC-----------eeEeccCCcc
Confidence 4433 332 122343332 2345578889999888655 4556777766520 0000 0000000000
Q ss_pred CCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecCCCCceEEEeeCCCcE
Q psy18091 288 HHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNPVVPGMLASCSDDGDV 367 (377)
Q Consensus 288 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i 367 (377)
.....+..+.+.+.+.+++++ .++.+..-.. . +. .+..+.. ...+...+.++.|.+ ++ .++.++.+|.|
T Consensus 247 ~~~~~~~~v~~~~~~~~~~~g-~~g~i~~S~D-g--G~----tW~~~~~-~~~~~~~~~~v~~~~-~~-~~~~~G~~G~i 315 (327)
T 2xbg_A 247 RNSVGFLDLAYRTPNEVWLAG-GAGALLCSQD-G--GQ----TWQQDVD-VKKVPSNFYKILFFS-PD-QGFILGQKGIL 315 (327)
T ss_dssp SCCSCEEEEEESSSSCEEEEE-STTCEEEESS-T--TS----SCEECGG-GTTSSSCCCEEEEEE-TT-EEEEECSTTEE
T ss_pred cCCcceEEEEecCCCEEEEEe-CCCeEEEeCC-C--Cc----ccEEcCc-cCCCCCCeEEEEEEC-CC-ceEEEcCCceE
Confidence 012347778887766655554 5676633211 1 11 1111111 011234578888875 34 35567789977
Q ss_pred EEEe
Q psy18091 368 KLWQ 371 (377)
Q Consensus 368 ~iWd 371 (377)
.-++
T Consensus 316 ~~~~ 319 (327)
T 2xbg_A 316 LRYV 319 (327)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6554
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.85 E-value=0.031 Score=55.93 Aligned_cols=241 Identities=10% Similarity=0.087 Sum_probs=138.8
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeee-----ccCcCceeEEEECCCCCEEEEEECCCcEEEEe
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILS-----DGHQRTIRETAWSPCGNFIASASFDATTAVWD 125 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-----~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd 125 (377)
..|.++..+++|.+-+ |+.++-|..|+..+ ..+....... .-....|.++...++++.|..|..++-+..||
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~--~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPIT--QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTT--CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCC--CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 5699999999987654 66676788888653 1221110000 01235688888888888566677777799999
Q ss_pred CCCCceEEeEEec--CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe----eccccceeEEEEeeCCc
Q psy18091 126 KRSGQFECNATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI----NAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 126 ~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~ 199 (377)
..+++........ .....|.++...++|+.++.. .+ -+..||..+.. +...... ......|.++...+++.
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRS-FTTIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTE-EEECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCe-EEEccccccccccCCceEEEEEECCCCC
Confidence 9887654321100 124579999988888866654 44 48889976542 1111000 01224578888888787
Q ss_pred EEEEeeCCCcEEEEecCcccccceeee----ecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFA----TLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDN 275 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~ 275 (377)
+.+... +-+..|+...... .+. .-......|.++..+++|.+.++. .. .+..|+....
T Consensus 511 lWigt~--~Gl~~~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~----------- 572 (795)
T 4a2l_A 511 LWIGGE--EGLSVFKQEGLDI---QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDK----------- 572 (795)
T ss_dssp EEEEES--SCEEEEEEETTEE---EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTT-----------
T ss_pred EEEEeC--CceEEEeCCCCeE---EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCC-----------
Confidence 666544 4577777653321 111 001234578999999988865543 33 5666763211
Q ss_pred CCcEEEEEeecCCCCcceeEEEecccCCEEEEEeCCCcEEEEEe
Q psy18091 276 DSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACGDDAIRIFKE 319 (377)
Q Consensus 276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~ 319 (377)
.+.......+-.+..|.++...+.+.+.+++ . +.+..|+.
T Consensus 573 --~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~ 612 (795)
T 4a2l_A 573 --QIKRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCFNP 612 (795)
T ss_dssp --EEEEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEEET
T ss_pred --cEEEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEEcC
Confidence 1111111112123457778777777766655 3 45555653
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.79 E-value=0.0012 Score=64.66 Aligned_cols=195 Identities=8% Similarity=0.055 Sum_probs=107.4
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeec----cCc-Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeE
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSD----GHQ-RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFECNA 135 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~----~h~-~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 135 (377)
+..|+.++.++.|..+|..+....+........ ... ..+ ..+++ .+..++.++.|+.+..+|..+|+.....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 456777778888888887654333222110000 000 001 11122 3567777888999999999999866444
Q ss_pred EecCcc--CCEEE-EEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeecc---------------------
Q psy18091 136 TLEGHE--NEVKS-VTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAH--------------------- 185 (377)
Q Consensus 136 ~~~~h~--~~v~~-l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~--------------------- 185 (377)
...... ..+.+ -.. .++ .++.+.. +|.|..+|.++.+...........
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 332110 01111 001 134 4444432 588999999887654432211100
Q ss_pred -------ccceeEEEEeeCCcEEEEeeCCCc-------------------EEEEecCcccccceeeeecccCC-------
Q psy18091 186 -------IQDVKKVRFHPFDNILASASYDDT-------------------VKLFKEDKAEADWINFATLKSHT------- 232 (377)
Q Consensus 186 -------~~~v~~~~~~~~~~~l~s~s~dg~-------------------i~~~~~~~~~~~~~~~~~~~~h~------- 232 (377)
......+.++|..+.+..++.++. |..+|..+.+..|.. ....|.
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~--~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY--QVTPGDSWDFTAT 299 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE--ESSTTCCSCCCCC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe--ecCCCccccccCC
Confidence 011124678888888888876653 888888877766642 222232
Q ss_pred cceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 233 STVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 233 ~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
.+..-..+..+|+ .++.++.+|.+.++|..
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~ 332 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT 332 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETT
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECC
Confidence 2222222223454 68889999999999854
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.77 E-value=0.0021 Score=62.93 Aligned_cols=202 Identities=13% Similarity=0.116 Sum_probs=105.5
Q ss_pred EEEEEECCCCCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEE-CC-----CcEEEEe
Q psy18091 53 VWNVSWNPQGTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASAS-FD-----ATTAVWD 125 (377)
Q Consensus 53 V~~v~~~~~g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s-~d-----~~i~iwd 125 (377)
..++++..+|++++.||. +..+.+||..+ ..+....-. .....-.+++..++++.++.|+ .+ ..+.+||
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t--~~W~~~~~~--~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSS--DSWIPGPDM--QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGG--TEEEECCCC--SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcC--CceeECCCC--CccccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 345678889999999984 56899999764 223221111 1111112345567899888888 34 5689999
Q ss_pred CCCCceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECC---------CcEEEEEcCCCCceeEEEEeec------cccc
Q psy18091 126 KRSGQFECNATL--EGHENEVKSVTWSKNGQFLATCSRD---------KSVWVWEVGEEDEYECAAVINA------HIQD 188 (377)
Q Consensus 126 ~~~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d---------g~v~~wd~~~~~~~~~~~~~~~------~~~~ 188 (377)
..+++....... ......-....+..+++.++.|+.+ ..+..||............... ....
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 988765432100 0000000001122344444555444 3567888876543221111111 0111
Q ss_pred eeEEEEee-CCcEEEEeeCCC-----------cEEEEecCcccccceeee--ecccCCcceEEEEEcCCCCeEEEeeCC-
Q psy18091 189 VKKVRFHP-FDNILASASYDD-----------TVKLFKEDKAEADWINFA--TLKSHTSTVWSLAFDRIGSRLATCSDD- 253 (377)
Q Consensus 189 v~~~~~~~-~~~~l~s~s~dg-----------~i~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D- 253 (377)
-..+.+.. ++++++.|+.++ .+.+||.... .|.... .+ .....-.+++..++++.++.||.+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~ 477 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS--PNTVFASNGL-YFARTFHTSVVLPDGSTFITGGQRR 477 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC--CEEEECTTCC-SSCCBSCEEEECTTSCEEEECCBSB
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC--CeeEEccCCC-CCCcccCCeEECCCCCEEEECCccc
Confidence 23344433 577888887543 4667776532 243322 11 111112344566889999999865
Q ss_pred ----------CcEEEEee
Q psy18091 254 ----------ATVKIWKE 261 (377)
Q Consensus 254 ----------~~i~iw~~ 261 (377)
..+.+||.
T Consensus 478 ~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 478 GIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp CCTTCCCSBCCCCEEEEG
T ss_pred CcCcCCCCcccceEEEcC
Confidence 45677775
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.04 Score=54.95 Aligned_cols=242 Identities=11% Similarity=0.065 Sum_probs=132.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 130 (377)
..|.++...++|.+.+ |+.++-|..++.... .+.....-.......|.++...+++.+.+ |..++-+..+|..+++
T Consensus 363 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWI-GTDGGGINVFENGKR--VAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECTTSCEEE-EEBSSCEEEEETTEE--EEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCE
T ss_pred cceEEEEEcCCCCEEE-EeCCCcEEEEECCCC--eEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCc
Confidence 5699999998887654 455556888876421 11110000012345788888887776555 6666678899988776
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee---ccccceeEEEEeeCCcEEEEeeCC
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN---AHIQDVKKVRFHPFDNILASASYD 207 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~s~d 207 (377)
+............|.++...++++..+. +. +-|..+|..+..- ....... .....+.++...+++.+.+. +.+
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~ 514 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG 514 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS
T ss_pred EEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCEEEE-EcC
Confidence 5422110113467899988888765554 44 5588898765432 1111001 01346788888887775554 443
Q ss_pred CcEEEEecCcccccceeeeecc-cCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeec
Q psy18091 208 DTVKLFKEDKAEADWINFATLK-SHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLS 286 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
+-+..++...... ..+.... -....|.++..+++|.+.++ +.+|.+..||.... .+.......
T Consensus 515 ~Gl~~~~~~~~~~--~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~-------------~~~~~~~~~ 578 (781)
T 3v9f_A 515 GGVGIYTPDMQLV--RKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNF-------------DYQVFQRKE 578 (781)
T ss_dssp SCEEEECTTCCEE--EEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTC-------------CCEEECGGG
T ss_pred CCEEEEeCCCCeE--EEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCC-------------cEEEccccC
Confidence 3466677654321 1111111 12356889999888876554 34565466653211 011111111
Q ss_pred CCCCcceeEEEecccCCEEEEEeCCCcEEEEE
Q psy18091 287 GHHGRTIYDISWCHLTDLIATACGDDAIRIFK 318 (377)
Q Consensus 287 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~ 318 (377)
+-.+..|..+...+.+.+.+++ .+| +..|+
T Consensus 579 gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~ 608 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWAST-NTG-ISCYI 608 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEEEC-SSC-EEEEE
T ss_pred CCCCceEEEEEECCCCCEEEEc-CCc-eEEEE
Confidence 1122356677766666665553 444 55554
No 259
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.77 E-value=0.0061 Score=54.04 Aligned_cols=198 Identities=10% Similarity=0.156 Sum_probs=107.8
Q ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCC
Q psy18091 50 QGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSG 129 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 129 (377)
.+.+..+.+.+++..++.+ .++.| |.....+..+... ...+...+..+++.+++.+++.+...+..+-.|....
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~---~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQAL---VQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEE---ECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCS
T ss_pred CCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEe---ecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCC
Confidence 3457888887777666655 45644 3222223333322 1244567889999998888876654443444442112
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEe-eccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVI-NAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
..... -......+..+.+.++++.+ .++.+|.++..+......+...... ......+..+.+.+.+.+++++. +|
T Consensus 195 tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g 270 (327)
T 2xbg_A 195 AWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AG 270 (327)
T ss_dssp SCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TT
T ss_pred ceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CC
Confidence 22211 12345678899999988755 4556788777642211111111000 01123477888888777666654 66
Q ss_pred cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 209 TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
.+.. ... ....|............+.++.|.+. ..++.++.+|.|.-++
T Consensus 271 ~i~~-S~D-gG~tW~~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 271 ALLC-SQD-GGQTWQQDVDVKKVPSNFYKILFFSP-DQGFILGQKGILLRYV 319 (327)
T ss_dssp CEEE-ESS-TTSSCEECGGGTTSSSCCCEEEEEET-TEEEEECSTTEEEEEC
T ss_pred eEEE-eCC-CCcccEEcCccCCCCCCeEEEEEECC-CceEEEcCCceEEEEc
Confidence 6632 222 22345433322223456778888754 4567777889776654
No 260
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.74 E-value=0.017 Score=53.27 Aligned_cols=199 Identities=11% Similarity=0.110 Sum_probs=109.0
Q ss_pred CEEEEEECCC---CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC---Cc-EEEE
Q psy18091 52 RVWNVSWNPQ---GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD---AT-TAVW 124 (377)
Q Consensus 52 ~V~~v~~~~~---g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d---~~-i~iw 124 (377)
.-..++|+|+ |.+.++ ...+.|+.++... .... .+ .........++++++|+++++-... .. +...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~--g~v~--~~--~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~ 212 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVN--QYVD--IK--TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLF 212 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTT--TEEE--EE--CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEE
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCC--CEEE--Ee--ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEE
Confidence 3568999985 544444 3338899888742 1111 11 1233457889999999954443311 11 2223
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcC-CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEE
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSK-NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILA 202 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 202 (377)
+...+ ......+. .......+++.| ++..+++-..++.|+.+|..+........ ..........++++|+++ +++
T Consensus 213 ~~~~~-~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 213 TRASG-FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp CGGGT-TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-ECSCCSSCEEEEECTTSSEEEE
T ss_pred ECCCC-eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-ccCCCCCcccEEEeCCCCEEEE
Confidence 32221 11001111 123456788899 66666666667889888876443211111 111122234699999998 556
Q ss_pred EeeCCCcEEEEecCcccccce---eeeec------------ccCCcceEEEEE---------cCCCCeEEEeeCCCcEEE
Q psy18091 203 SASYDDTVKLFKEDKAEADWI---NFATL------------KSHTSTVWSLAF---------DRIGSRLATCSDDATVKI 258 (377)
Q Consensus 203 s~s~dg~i~~~~~~~~~~~~~---~~~~~------------~~h~~~v~~~~~---------~~~~~~l~s~s~D~~i~i 258 (377)
+-...+.|..++.......+. .+... ...-.....+++ .+.|.++++-...+.|+.
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 666778899877542211110 00000 001123567888 777777788777788888
Q ss_pred Ee
Q psy18091 259 WK 260 (377)
Q Consensus 259 w~ 260 (377)
++
T Consensus 370 ~~ 371 (433)
T 4hw6_A 370 LT 371 (433)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.71 E-value=0.004 Score=54.75 Aligned_cols=217 Identities=12% Similarity=0.070 Sum_probs=120.3
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCcc
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHE 141 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~ 141 (377)
+..+..++.++.|..+|.. +... ... ..+...+.++...+++. +..++.++.+..+|.. ++...... ...
T Consensus 107 ~~~l~v~t~~~~l~~~d~~--g~~~---~~~-~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~--~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD--GTEK---WRF-KTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK--TND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT--SCEE---EEE-ECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE--CSS
T ss_pred CCEEEEEecCCEEEEEcCC--CCEE---EEE-cCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe--cCC
Confidence 4566678888889999865 2211 111 12333455566676766 4456778999999988 65443322 234
Q ss_pred CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCccccc
Q psy18091 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEAD 221 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~ 221 (377)
..+.++...+++..++.. +.|..+| .+..... ........+.++...+++. +..++.++.+..++... ...
T Consensus 177 ~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~---~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g-~~~ 247 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKW---NFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG-TEK 247 (330)
T ss_dssp CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEE---EECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS-CEE
T ss_pred CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEE---EEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC-CEe
Confidence 456667777777755444 7799999 4433221 1222334566777777665 45566677788887432 221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEeccc
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHL 301 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 301 (377)
| ........+.++.+.+++ .|..++.++.|..+|. . +. ..+. ..+. +..+..+...++
T Consensus 248 ~----~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~-g~----------~~~~--~~~~---~~~~~~~~~d~~ 305 (330)
T 3hxj_A 248 W----RFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-D-GT----------EKWN--FETG---SWIIATPVIDEN 305 (330)
T ss_dssp E----EEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-T-SC----------EEEE--EECS---SCCCSCCEECTT
T ss_pred E----EeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-C-Cc----------EEEE--EEcC---CccccceEEcCC
Confidence 2 111122223334555555 5667777888888863 1 11 0111 1111 223444444343
Q ss_pred CCEEEEEeCCCcEEEEEeC
Q psy18091 302 TDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 302 ~~~l~~~~~d~~i~v~~~~ 320 (377)
+.|..++.+|.+++....
T Consensus 306 -g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 306 -GTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp -CCEEEECTTSCEEEEEC-
T ss_pred -CEEEEEcCCCeEEEEecc
Confidence 456668889999887543
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.03 Score=51.66 Aligned_cols=155 Identities=9% Similarity=0.116 Sum_probs=96.5
Q ss_pred ceeEEEECC-CCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-C----cEEEEEcCC
Q psy18091 99 TIRETAWSP-CGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-K----SVWVWEVGE 172 (377)
Q Consensus 99 ~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-g----~v~~wd~~~ 172 (377)
.-..++++| ++..|..+...+.|+.+|..++.+... .........++|++++++++.+... + .+.+.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~---~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTV---YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEE---ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEE---ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 346788998 455666666558899999887764422 2234568899999999976666552 1 233344322
Q ss_pred CCceeEEEEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEEe
Q psy18091 173 EDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLATC 250 (377)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 250 (377)
. +.....+. .......++++| ++.++++-..++.|..++....... .+..... ......++|+|+|+ ++++.
T Consensus 215 ~--~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~~-~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 215 G--FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQD-SGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp T--SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECSS-SSCCEEEEECTTSSEEEEEE
T ss_pred c--eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcCC-CCcceeEEEcCCCCEEEEEE
Confidence 1 11011111 123456788999 6777777777889999987643321 1111111 23456899999999 55666
Q ss_pred eCCCcEEEEeee
Q psy18091 251 SDDATVKIWKEY 262 (377)
Q Consensus 251 s~D~~i~iw~~~ 262 (377)
...+.|..++..
T Consensus 289 ~~~~~I~~~~~d 300 (430)
T 3tc9_A 289 VNQHYILRSDYD 300 (430)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCEEEEEeCC
Confidence 677888888754
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.67 E-value=0.019 Score=48.18 Aligned_cols=189 Identities=13% Similarity=0.113 Sum_probs=109.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCC--cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDK--NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
.....+.|++ +.+..+.+.+| .|+..|.++. +... .+-...+. .-..+++.. ++.......++.+.+||..+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg--kv~~-~~~l~~~~-fgeGi~~~~-~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETG--RILQ-RAEVPPPY-FGAGIVAWR-DRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTC--CEEE-EEECCTTC-CEEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCC--CEEE-EEeCCCCc-ceeEEEEeC-CEEEEEEeeCCEEEEEECCc
Confidence 4567899987 67777888764 8999998752 2211 11111111 112233332 34444556789999999998
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec--cccceeEEEEeeCCcEEEEeeC
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA--HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.+........+ .-..++ +++..|+.+..++.|.++|..+............ ....++.+.+. ++..++..-.
T Consensus 95 l~~~~ti~~~~---~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 95 LTPRARFRYPG---EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TEEEEEEECSS---CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcEEEEEeCCC---CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 87654444433 223443 5677777777899999999887654332222110 11234555554 5666655556
Q ss_pred CCcEEEEecCcccc-cceeeeecc--------cCCcceEEEEEcCCCCeEEEee
Q psy18091 207 DDTVKLFKEDKAEA-DWINFATLK--------SHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 207 dg~i~~~~~~~~~~-~~~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s 251 (377)
+..|.+.|...... .+..+..+. .-....+.++++|.++.|...+
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 77888888876543 122222221 1123567899999877655444
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.66 E-value=0.025 Score=49.37 Aligned_cols=193 Identities=10% Similarity=0.100 Sum_probs=105.3
Q ss_pred CCEEEEEECCCCCEEEEEeCCCc--EEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKN--IRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~--v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 128 (377)
+....++++++|+++++...... |..++..+ .... .+...........++..+.+..+++-..++.|..+|..+
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~--g~~~--~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD--GTVE--TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTT--SCEE--EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCC--CeEE--EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 45788999999997766544333 54454332 1111 111111112223444455555455544578888888765
Q ss_pred CceEEeEE--------ecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc
Q psy18091 129 GQFECNAT--------LEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN 199 (377)
Q Consensus 129 ~~~~~~~~--------~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (377)
++...... ....-.....+ +|++++++.+ ...+.|..+++...........+.. ......++++++|+
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC
Confidence 43221100 00111234555 7888765554 4567899999864221111111111 12355688999999
Q ss_pred EEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEc---CCCCeEEEeeCC
Q psy18091 200 ILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD---RIGSRLATCSDD 253 (377)
Q Consensus 200 ~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~l~s~s~D 253 (377)
++++....+.|..++... . ...+..+.......++++|. +++..|...+..
T Consensus 225 l~va~~~~~~V~~~~~~G-~--~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPDR-S--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEECBTTCCEEEECTTC-C--EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEEeCCCCeEEEECCCC-C--EEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 888888889999998652 1 11111222223467899998 787766554443
No 265
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.64 E-value=0.0065 Score=53.34 Aligned_cols=158 Identities=8% Similarity=0.112 Sum_probs=101.6
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEeecccCCCcccceeeeecc-----C-cCceeEEEE---CCCCCEEEEEEC------
Q psy18091 54 WNVSWNPQGTMISSCG-EDKNIRLWGKESFGNKFTAKAILSDG-----H-QRTIRETAW---SPCGNFIASASF------ 117 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s-~D~~v~~W~~~~~~~~~~~~~~~~~~-----h-~~~V~~~~~---~~~~~~l~s~s~------ 117 (377)
.+++|++...++..++ ..++|..|+... .... .+...+ - ...+..+.| .|+++++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~--~~~~--~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKT--QSHF--NVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTT--CCEE--EECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCC--CeEE--EEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 3678888555555555 789999998752 1111 111111 0 113578899 688777775442
Q ss_pred -------CCcEEEEeCC---CCceEEeEEecCcc-----------CCEEEEEEcCCCCEEEEEECC-CcEEEEEcCCCCc
Q psy18091 118 -------DATTAVWDKR---SGQFECNATLEGHE-----------NEVKSVTWSKNGQFLATCSRD-KSVWVWEVGEEDE 175 (377)
Q Consensus 118 -------d~~i~iwd~~---~~~~~~~~~~~~h~-----------~~v~~l~~~~~~~~l~s~~~d-g~v~~wd~~~~~~ 175 (377)
+..+..||+. +++......+.... .....++..++|+..++++.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 6779999988 67654333332211 247899999999998988887 87766665443 1
Q ss_pred eeEEEEeec----cccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 176 YECAAVINA----HIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 176 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
.... .... .....+.+.++|+++.|++....|.+..+|+..
T Consensus 171 ~~~~-~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 VSTF-AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEE-EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred Eeee-eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2111 1111 112366899999999888887799999999873
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.60 E-value=0.0044 Score=54.42 Aligned_cols=160 Identities=7% Similarity=0.102 Sum_probs=103.0
Q ss_pred eEEEECCCCCEEEEEE-CCCcEEEEeCCCCceEEeEEecC----cc--CCEEEEEE---cCCCCEEEEEE----------
Q psy18091 101 RETAWSPCGNFIASAS-FDATTAVWDKRSGQFECNATLEG----HE--NEVKSVTW---SKNGQFLATCS---------- 160 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~----h~--~~v~~l~~---~~~~~~l~s~~---------- 160 (377)
.+.+|++....|..++ ..+.|..||...+..+.. .+.+ .. ..+..+.| .|+++.+++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 4568988655555555 789999999876654433 3332 11 13579999 58877777544
Q ss_pred ---CCCcEEEEEcC---CCCceeEEEEeecc-----------ccceeEEEEeeCCcEEEEeeCC-CcEEEEecCccccc-
Q psy18091 161 ---RDKSVWVWEVG---EEDEYECAAVINAH-----------IQDVKKVRFHPFDNILASASYD-DTVKLFKEDKAEAD- 221 (377)
Q Consensus 161 ---~dg~v~~wd~~---~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~s~s~d-g~i~~~~~~~~~~~- 221 (377)
.+..|..||+. +....... .+... ......++..++|+.+++++.. +.|...+.......
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~-dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSV-NFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEE-ESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEe-cCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 26779999998 55433222 12111 1247789999999999999988 88777776543221
Q ss_pred ceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
|..-..........+.++++|+|..|+....++.+..+|+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 11000001122235688999999988777669999999875
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.55 E-value=0.085 Score=52.61 Aligned_cols=291 Identities=10% Similarity=-0.005 Sum_probs=153.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee-------e----eccCcCceeEEEECCCCCEEEEEECCC
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI-------L----SDGHQRTIRETAWSPCGNFIASASFDA 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~-------~----~~~h~~~V~~~~~~~~~~~l~s~s~d~ 119 (377)
..|+++...++|.+.+ |+..+-|.+++.... .+..... . ..-....|.++...++|.. -.|..++
T Consensus 258 ~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~--~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~~ 333 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWI-ATELNGIMILDLQQN--QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTWGG 333 (781)
T ss_dssp CCEEEEEECTTSEEEE-EESSSCEEEEETTCC-----------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBSS
T ss_pred ceEEEEEECCCCCEEE-EeCCCCeEEECCCCC--eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecCC
Confidence 5689999988887654 445345777876531 1111000 0 0113456888888888764 4466667
Q ss_pred cEEEEeCCCCceEEeEEe-------cCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEE-EeeccccceeE
Q psy18091 120 TTAVWDKRSGQFECNATL-------EGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAA-VINAHIQDVKK 191 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~~~~~~~~v~~ 191 (377)
-|..++..++.+...... ......|.++...++|...+ |+.++-|..||..... ..... ........|.+
T Consensus 334 Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 334 GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWI-GTDGGGINVFENGKRV-AIYNKENRELLSNSVLC 411 (781)
T ss_dssp CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEE-EEBSSCEEEEETTEEE-EECC-----CCCSBEEE
T ss_pred eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEE-EeCCCcEEEEECCCCe-EEEccCCCCCCCcceEE
Confidence 788898876654322110 01235689999888887554 4545568888865421 11000 00112345777
Q ss_pred EEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCC
Q psy18091 192 VRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~ 271 (377)
+...+++.+.+ |+.++-+..++...... ..+.........|.++..+++|.+.+ |+. +.|..++.....-. .
T Consensus 412 i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~-~-- 483 (781)
T 3v9f_A 412 SLKDSEGNLWF-GTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVI-H-- 483 (781)
T ss_dssp EEECTTSCEEE-EETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCC-E--
T ss_pred EEECCCCCEEE-EeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEE-e--
Confidence 77776666544 66666688887654322 11111012345789998888776544 444 45777764321100 0
Q ss_pred CCCCCCcEEEEEeec--CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEE
Q psy18091 272 TPDNDSVWKCVCTLS--GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVA 349 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 349 (377)
..... ......|.++...+.+.+.+...+.| +..|+..... ... ......-....|.++.
T Consensus 484 ----------~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~----~~~---~~~~~~l~~~~i~~i~ 545 (781)
T 3v9f_A 484 ----------HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL----VRK---FNQYEGFCSNTINQIY 545 (781)
T ss_dssp ----------EECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE----EEE---ECTTTTCSCSCEEEEE
T ss_pred ----------cccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe----EEE---ccCCCCCCCCeeEEEE
Confidence 00000 00124677787777676666544344 5555432211 111 1111111234688888
Q ss_pred ecCCCCceEEEeeCCCcEEEEecccC
Q psy18091 350 WNPVVPGMLASCSDDGDVKLWQIKLE 375 (377)
Q Consensus 350 ~~p~~~~~laS~s~Dg~i~iWd~~~~ 375 (377)
..+. +.+.++ +.+|.+..||.+.+
T Consensus 546 ~d~~-g~lWi~-T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 546 RSSK-GQMWLA-TGEGLVCFPSARNF 569 (781)
T ss_dssp ECTT-SCEEEE-ETTEEEEESCTTTC
T ss_pred ECCC-CCEEEE-ECCCceEEECCCCC
Confidence 8874 444443 33676577776543
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.49 E-value=0.034 Score=53.28 Aligned_cols=194 Identities=11% Similarity=0.048 Sum_probs=100.5
Q ss_pred CCEEEEEeC-CCcEEEeec-ccCCCcccceeeeecc-Cc----Cce-eEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 62 GTMISSCGE-DKNIRLWGK-ESFGNKFTAKAILSDG-HQ----RTI-RETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 62 g~~l~s~s~-D~~v~~W~~-~~~~~~~~~~~~~~~~-h~----~~V-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
+..++.++. ++.|...|. .+....+....-.... +. ..+ ...+. .+..++.++.|+.+..+|..+|+...
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 445666666 788888887 5432222211100000 00 000 11122 35677778889999999999998765
Q ss_pred eEEecCccC--CEEE-EEEcCCCCEEEEEEC------CCcEEEEEcCCCCceeEEEEeeccc------------------
Q psy18091 134 NATLEGHEN--EVKS-VTWSKNGQFLATCSR------DKSVWVWEVGEEDEYECAAVINAHI------------------ 186 (377)
Q Consensus 134 ~~~~~~h~~--~v~~-l~~~~~~~~l~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~------------------ 186 (377)
...+..+.. .+.+ -.. .++ .++.++. ++.|..+|.++.+............
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 544433211 1111 011 134 4555544 7899999998876543322111000
Q ss_pred ---------------c--ceeEEEEeeCCcEEEEeeCC----------------CcEEEEecCcccccceeeeecccC--
Q psy18091 187 ---------------Q--DVKKVRFHPFDNILASASYD----------------DTVKLFKEDKAEADWINFATLKSH-- 231 (377)
Q Consensus 187 ---------------~--~v~~~~~~~~~~~l~s~s~d----------------g~i~~~~~~~~~~~~~~~~~~~~h-- 231 (377)
. ....+.+.+....+..+..+ +.|..+|....+..|.. +...|
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~--~~~~~d~ 295 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGY--QKTPHDE 295 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEE--ESSTTCS
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEe--cCCCCcc
Confidence 0 00134566666666555432 24888888777666642 22222
Q ss_pred ------CcceEEEEEcCCCC---eEEEeeCCCcEEEEeee
Q psy18091 232 ------TSTVWSLAFDRIGS---RLATCSDDATVKIWKEY 262 (377)
Q Consensus 232 ------~~~v~~~~~~~~~~---~l~s~s~D~~i~iw~~~ 262 (377)
..++. +....+|+ .++.++.+|.+..+|..
T Consensus 296 ~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~ 334 (571)
T 2ad6_A 296 WDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRE 334 (571)
T ss_dssp SCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECC
Confidence 22322 12223563 56678888888888753
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.45 E-value=0.027 Score=54.20 Aligned_cols=196 Identities=12% Similarity=0.025 Sum_probs=104.1
Q ss_pred CCEEEEEeC-CCcEEEeec-ccCCCcccceeeeeccCc------CceeEEEECCCCCE----EEEEECCCcEEEEeCCCC
Q psy18091 62 GTMISSCGE-DKNIRLWGK-ESFGNKFTAKAILSDGHQ------RTIRETAWSPCGNF----IASASFDATTAVWDKRSG 129 (377)
Q Consensus 62 g~~l~s~s~-D~~v~~W~~-~~~~~~~~~~~~~~~~h~------~~V~~~~~~~~~~~----l~s~s~d~~i~iwd~~~~ 129 (377)
+..|+.++. ++.|.-+|. .+....+....-...... .....++++|.+.. ++.++.|+.+.-+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 455666666 788888887 543222221110000000 00122445443333 777888999999999999
Q ss_pred ceEEeEEecCccC--CEEE-EEEcCCCCEEEEEE------CCCcEEEEEcCCCCceeEEEEeeccc--------------
Q psy18091 130 QFECNATLEGHEN--EVKS-VTWSKNGQFLATCS------RDKSVWVWEVGEEDEYECAAVINAHI-------------- 186 (377)
Q Consensus 130 ~~~~~~~~~~h~~--~v~~-l~~~~~~~~l~s~~------~dg~v~~wd~~~~~~~~~~~~~~~~~-------------- 186 (377)
+......+..+.. .+.+ -.. .++ .++.++ .++.|+.+|.++.+............
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 8765444433211 1111 011 134 455544 37899999998876543322111000
Q ss_pred --------------------c-ceeEEEEeeCCcEEEEeeCCC----------------cEEEEecCcccccceeeeecc
Q psy18091 187 --------------------Q-DVKKVRFHPFDNILASASYDD----------------TVKLFKEDKAEADWINFATLK 229 (377)
Q Consensus 187 --------------------~-~v~~~~~~~~~~~l~s~s~dg----------------~i~~~~~~~~~~~~~~~~~~~ 229 (377)
. ......+.+....+..+..++ .|..+|....+..|.. +..
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~--q~~ 297 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY--QKT 297 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE--ESS
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe--ecC
Confidence 0 001345667777777666553 6788888777766642 223
Q ss_pred cCC--------cceEEEEEc-CCC---CeEEEeeCCCcEEEEeee
Q psy18091 230 SHT--------STVWSLAFD-RIG---SRLATCSDDATVKIWKEY 262 (377)
Q Consensus 230 ~h~--------~~v~~~~~~-~~~---~~l~s~s~D~~i~iw~~~ 262 (377)
.|. .++. +... .+| ..++.++.+|.+.++|..
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~ 341 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRT 341 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETT
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECC
Confidence 332 2222 1221 456 457778889998888753
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.41 E-value=0.076 Score=48.89 Aligned_cols=203 Identities=6% Similarity=0.071 Sum_probs=110.0
Q ss_pred cCCEEEEEECCCCCEEEEEeC-CC----cEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEE
Q psy18091 50 QGRVWNVSWNPQGTMISSCGE-DK----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAV 123 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~s~s~-D~----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~i 123 (377)
......++|+++|++|+.+.. .+ .+...+.+ +.......+.. ......++++| ++..+++-..++.|..
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~--g~~~~~~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~ 252 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE--SGFKVITELTK---GQNCNGAETHPINGELYFNSWNAGQVFR 252 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG--GTSCSEEEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC--Cceeeeeeecc---CCCceEEEEeCCCCEEEEEECCCCEEEE
Confidence 345788999999995544443 22 23333322 11111111111 22346678999 6776666666788999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEE-ECCCcEEEEEcCCCC-ceeEEEEeec---------------cc
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC-SRDKSVWVWEVGEED-EYECAAVINA---------------HI 186 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~-~~dg~v~~wd~~~~~-~~~~~~~~~~---------------~~ 186 (377)
++..++.......... ......++|+|++++|+.+ ...+.|..++..... .+.....+.. ..
T Consensus 253 ~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~ 331 (430)
T 3tc9_A 253 YDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARM 331 (430)
T ss_dssp EETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBB
T ss_pred EECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEe
Confidence 9988775432222222 2346789999999955544 466788888765321 1100011110 01
Q ss_pred ccee-EEEEe--------eCCcEEEEeeCCCcEEEEecCcccccceeeeec-----cc----------CCcceEEEEEcC
Q psy18091 187 QDVK-KVRFH--------PFDNILASASYDDTVKLFKEDKAEADWINFATL-----KS----------HTSTVWSLAFDR 242 (377)
Q Consensus 187 ~~v~-~~~~~--------~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~-----~~----------h~~~v~~~~~~~ 242 (377)
.... .+... +++.++++-..++.|+.++... . ...+... .+ .-...+.+++++
T Consensus 332 ~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G-~--v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 332 HAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG-R--VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp SSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS-E--EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred CCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC-c--EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 1122 34443 3356666666777888887432 1 1111100 01 112467899998
Q ss_pred C-CCeEEEeeCCCcEEEEee
Q psy18091 243 I-GSRLATCSDDATVKIWKE 261 (377)
Q Consensus 243 ~-~~~l~s~s~D~~i~iw~~ 261 (377)
+ +.++++-.....|+.++.
T Consensus 409 ~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 409 ERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTTEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEcc
Confidence 4 666667666777777653
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.28 E-value=0.042 Score=52.71 Aligned_cols=154 Identities=7% Similarity=0.068 Sum_probs=83.7
Q ss_pred CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCc--CceeEEEECC--CCCEEEEEEC------CCcEEEEeCCCCce
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQ--RTIRETAWSP--CGNFIASASF------DATTAVWDKRSGQF 131 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~~--~~~~l~s~s~------d~~i~iwd~~~~~~ 131 (377)
+..++.++.|+.|..+|..+....+.... ..+. ..+. -+| .+..++.++. ++.+..+|..+|+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~---~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEV---CDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC---CCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecC---CCCCccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 45777888899999998875332322111 1111 0111 122 1344555544 78999999999986
Q ss_pred EEeEEecCcc----------------------------------C--CEEEEEEcCCCCEEEEEECC-------------
Q psy18091 132 ECNATLEGHE----------------------------------N--EVKSVTWSKNGQFLATCSRD------------- 162 (377)
Q Consensus 132 ~~~~~~~~h~----------------------------------~--~v~~l~~~~~~~~l~s~~~d------------- 162 (377)
.......... + ....+++.++...++.+..+
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 5443322110 0 00124555655566655532
Q ss_pred ---CcEEEEEcCCCCceeEEEEeeccc-------cceeEEEEeeCCc---EEEEeeCCCcEEEEecCcccccc
Q psy18091 163 ---KSVWVWEVGEEDEYECAAVINAHI-------QDVKKVRFHPFDN---ILASASYDDTVKLFKEDKAEADW 222 (377)
Q Consensus 163 ---g~v~~wd~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~s~s~dg~i~~~~~~~~~~~~ 222 (377)
+.|..+|.++.+...... ...|. ....-+...++++ .++.++.+|.+.++|....+..|
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~-~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQ-KTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEE-SSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred eeEEEEEEEecCCCcEEEEec-CCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 358889988776443221 11111 1111122334663 57788899999999987665443
No 272
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.22 E-value=0.079 Score=44.93 Aligned_cols=149 Identities=10% Similarity=0.028 Sum_probs=90.6
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEE
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECA 179 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 179 (377)
...+.|+. +.+..+.+.++.|+++|+.+++..... +.. ...-..+++.. ++.++..-.++.+.+||..+.....
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~-- 130 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRER-- 130 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEE--
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEE--
Confidence 45677873 567778888899999999999875544 443 11223455543 3444555578899999998764433
Q ss_pred EEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 180 AVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 180 ~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
.+..... - ..+.++++.|..+..++.|.++|....+.. .......+. ..++.+.|. +|..++..-.++.|
T Consensus 131 -ti~~~~e-G--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~--~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 131 -TTRYSGE-G--WGLCYWNGKLVRSDGGTMLTFHEPDGFALV--GAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp -EEECSSC-C--CCEEEETTEEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred -EEeCCCc-e--eEEecCCCEEEEECCCCEEEEEcCCCCeEE--EEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 2222111 1 233466777777777889999997754421 111111122 234566766 56656555567788
Q ss_pred EEEee
Q psy18091 257 KIWKE 261 (377)
Q Consensus 257 ~iw~~ 261 (377)
.+.|.
T Consensus 204 ~vIDp 208 (268)
T 3nok_A 204 LEIDP 208 (268)
T ss_dssp EEECT
T ss_pred EEEeC
Confidence 88874
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.15 E-value=0.0071 Score=59.26 Aligned_cols=156 Identities=8% Similarity=0.138 Sum_probs=94.0
Q ss_pred EEEECCCCCEEEEEECCC-------------------cEEEEeCCCCceEEeEEecCcc-------CCEEEEEEcCCCC-
Q psy18091 102 ETAWSPCGNFIASASFDA-------------------TTAVWDKRSGQFECNATLEGHE-------NEVKSVTWSKNGQ- 154 (377)
Q Consensus 102 ~~~~~~~~~~l~s~s~d~-------------------~i~iwd~~~~~~~~~~~~~~h~-------~~v~~l~~~~~~~- 154 (377)
.++++|+...++.+..++ .|..+|..+|+.........|. .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 467888878888777665 3899999999876555444332 3333333334664
Q ss_pred --EEEEEECCCcEEEEEcCCCCceeEEE--------Eeeccc-------------------------cceeEEEEeeCCc
Q psy18091 155 --FLATCSRDKSVWVWEVGEEDEYECAA--------VINAHI-------------------------QDVKKVRFHPFDN 199 (377)
Q Consensus 155 --~l~s~~~dg~v~~wd~~~~~~~~~~~--------~~~~~~-------------------------~~v~~~~~~~~~~ 199 (377)
.++.++.+|.+.++|..+.+.+.... .+.... .....++++|+..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 68889999999999988775432110 000000 0011256677655
Q ss_pred EEEEe------------------------------------eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC
Q psy18091 200 ILASA------------------------------------SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI 243 (377)
Q Consensus 200 ~l~s~------------------------------------s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 243 (377)
++... ..+|.|..||....+..|.... ........+...
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~-----~~~~~~~~~~t~ 468 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY-----PTHWNGGTLSTA 468 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE-----SSSCCCCEEEET
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC-----CCCCcCceeEeC
Confidence 44331 1347788888877766554311 112222233345
Q ss_pred CCeEEEeeCCCcEEEEeee
Q psy18091 244 GSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 244 ~~~l~s~s~D~~i~iw~~~ 262 (377)
+.+++.++.|+.++.||..
T Consensus 469 gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp TTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCcccchhhhhh
Confidence 7788889999999999864
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.14 E-value=0.16 Score=46.83 Aligned_cols=251 Identities=9% Similarity=0.108 Sum_probs=132.6
Q ss_pred ceeEEEECCC--CCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC----c-EEEEEcC
Q psy18091 99 TIRETAWSPC--GNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK----S-VWVWEVG 171 (377)
Q Consensus 99 ~V~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg----~-v~~wd~~ 171 (377)
.-..++|+|+ ...|..+...+.|+.+|..++.... +.........++++++|+ |+.+...+ . +...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~---~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI---KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE---ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE---eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 3467899984 3445445444889999998776542 223445689999999999 55554422 1 3223322
Q ss_pred CCCceeEEEEeeccccceeEEEEee-CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHP-FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLAT 249 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 249 (377)
.. ......+. .......++++| .+.++++-..++.|+.++....... ..+..... ...-..++|+|+++ ++++
T Consensus 216 ~~--~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~-~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 216 SG--FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDT-KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp GT--TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSC-CSSCEEEEECTTSSEEEEE
T ss_pred CC--eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCC-CCCcccEEEeCCCCEEEEE
Confidence 11 11001111 223456678999 6777777777888999987633220 01111111 12224699999998 5556
Q ss_pred eeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEee---cCC--------CCcceeEEEe---------cccCCEEEEEe
Q psy18091 250 CSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTL---SGH--------HGRTIYDISW---------CHLTDLIATAC 309 (377)
Q Consensus 250 ~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~v~~~~~---------~~~~~~l~~~~ 309 (377)
-...+.|+.++......... .+ ..+.-. .+. .-..-..+++ .+.+.++++-.
T Consensus 291 d~~~~~I~~~~~d~~~~~~~--~~------~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLA--VP------YIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBC--CC------EEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred eCCCCEEEEEeCCCCCcccC--cE------EEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 66678888876432111000 00 000000 000 0012345666 45555666656
Q ss_pred CCCcEEEEEeCCCCCCCcceeeeeeecc-------------ccceecceeEEEecCCCCceEEEeeCCCcEEEEecc
Q psy18091 310 GDDAIRIFKENPEAGDSDMVSFDLVHTE-------------HRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 310 ~d~~i~v~~~~~~~~~~~~~~~~~~~~~-------------~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
.++.|+.++.. +. +. .+.... ..+....-..|+++|.++.++++=...+.|+..++.
T Consensus 363 ~n~~I~~~~~~---G~--v~--t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 363 DSHTVRVLTPE---GR--VT--TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEECTT---SE--EE--EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEECCC---CC--EE--EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 67778877521 10 00 011000 001123467899995467777776667778877653
No 275
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.06 E-value=0.16 Score=45.43 Aligned_cols=240 Identities=8% Similarity=0.058 Sum_probs=117.9
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee--eeccCcCceeEEEECCC---CCEEEEEEC----C---
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI--LSDGHQRTIRETAWSPC---GNFIASASF----D--- 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~V~~~~~~~~---~~~l~s~s~----d--- 118 (377)
..-+.++|.|+|.++++ ..++.|++++.. + . ....- ...........++++|+ +..|..+.. +
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~--G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPS--G-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSS--C-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCC--C-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 45689999999986655 456999888632 2 1 11000 01112345788999997 444443332 2
Q ss_pred -CcEEEEeCCCC--ceE---Ee-EEec-CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCCC---
Q psy18091 119 -ATTAVWDKRSG--QFE---CN-ATLE-GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEED--- 174 (377)
Q Consensus 119 -~~i~iwd~~~~--~~~---~~-~~~~-~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~~--- 174 (377)
+.|..|+...+ ... .. ..+. ........++|.|||..+++.+. .|.|.-++....-
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 55666765543 111 11 1122 11112467999999987666432 1445555543210
Q ss_pred -ceeEEEEeeccccceeEEEEee-CCcEEEEeeCCC---cEEEEecCcccccc-------------eeeeec-ccCCcce
Q psy18091 175 -EYECAAVINAHIQDVKKVRFHP-FDNILASASYDD---TVKLFKEDKAEADW-------------INFATL-KSHTSTV 235 (377)
Q Consensus 175 -~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg---~i~~~~~~~~~~~~-------------~~~~~~-~~h~~~v 235 (377)
.+.....+.........++|+| .+.++++-.... .|.+.... ....| .+...+ ..| ...
T Consensus 184 npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~~~~~-~ap 261 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG-GNYGWPLATGKAGRGEFVDPVIDTGSET-WAP 261 (354)
T ss_dssp SSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEECTTCC-CCE
T ss_pred CCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC-CcCCCCcccCCCCCCCCcCCEeecCCCC-cCC
Confidence 0000011111224456789999 566655543322 24333211 00000 011122 122 346
Q ss_pred EEEEE-------cCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 236 WSLAF-------DRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 236 ~~~~~-------~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
..++| ..+|.++++.-..+.|...++...+.. ......+.+ ....+.++.+.|++.+.++.
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~-----------~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEV-----------RKISTFFKN-VFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCE-----------EEEEEECTT-TSCCEEEEEECTTSCEEEEE
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcc-----------cceeeeccC-CCCCeeEEEECCCCcEEEEE
Confidence 67888 356777777666677766665321110 000111211 12357788888887766655
Q ss_pred e
Q psy18091 309 C 309 (377)
Q Consensus 309 ~ 309 (377)
.
T Consensus 330 ~ 330 (354)
T 3a9g_A 330 S 330 (354)
T ss_dssp C
T ss_pred e
Confidence 3
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.96 E-value=0.2 Score=45.22 Aligned_cols=195 Identities=6% Similarity=-0.055 Sum_probs=114.1
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++|++.+. +..+-...+.|+.++.+. .. ...+... .......+++++.+ +..++-...+.|.+.++..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g--~~--~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg 190 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNG--SN--VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 190 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CC--EEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTS
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCC--CC--cEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCC
Confidence 4577899997555 455656678888887752 11 1112221 22344678888754 4455555567888888765
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
.... ..+.........+++.|.+.+++.+.. . +.|...++...... ..........+.++++|.+ .++++-+
T Consensus 191 ~~~~--~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 191 AHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR---IIADTHLFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp CSCE--EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEEGGGTEEEEEET
T ss_pred CceE--EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE---EEEECCCCCeeeEEEeCCCCEEEEEEC
Confidence 4322 222333456789999987766655544 3 57877777654322 1222334456789999765 4556666
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..++....... .+ +.........+++. .+..+++....+.|..++
T Consensus 266 ~~~~I~~~d~dG~~~~--~~--~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 266 KHHVIERANLDGSHRK--AV--ISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp TTTEEEEECTTSCSCE--EE--ECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCeeE--EE--EECCCCCceEEEEE-CCEEEEeeCCCCeEEEEE
Confidence 6778999887643321 11 11122334566663 345566666667776665
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.90 E-value=0.19 Score=43.97 Aligned_cols=202 Identities=9% Similarity=-0.012 Sum_probs=116.4
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
....+++|++++. +..+-...+.|..++.+..........+. .........+++++.+ +..++-...+.|.+.+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 4578999998655 45565667889888876310001111122 1222345788898754 4455556678899999875
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEECC--CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSRD--KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
...... +.........+++.|.+.+++.+... +.|...++...... ..........+.++++|++. ++++-.
T Consensus 109 ~~~~~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~---~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 109 VKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp SSEEEE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CceEEE--EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE---EEEECCCCCceEEEEeccCCEEEEEEC
Confidence 433222 22233567899999977666555543 67887877543211 11222334577899998765 455555
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..++....... .+............+++.. +..+++....+.|..++.
T Consensus 184 ~~~~I~~~d~dg~~~~--~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 184 KLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TTTEEEEEETTSCSCE--EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEecCCCceE--EEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeC
Confidence 6778999988643221 1111111222345667653 556666666777777763
No 278
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.89 E-value=0.21 Score=44.38 Aligned_cols=195 Identities=6% Similarity=-0.055 Sum_probs=113.4
Q ss_pred CCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCC-CEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCG-NFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~-~~l~s~s~d~~i~iwd~~~ 128 (377)
.....++|++.... ..+-...+.|+.++.+. .. ...+... .......+++++.+ +..++-...+.|.+.+...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g--~~--~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNG--SN--VEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCC--CC--ceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 34688999975554 45555678888887762 11 1112221 22345778898754 4555555677899998865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CC-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCS-RD-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
.... ..+.........+++.|.+.+++... .. +.|...++....... .........+.++++|.+. ++++-.
T Consensus 148 ~~~~--~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~---~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 148 AHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI---IADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp CSCE--EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---SCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred CceE--EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE---EEECCCCCcceEEEeCCCCEEEEEEC
Confidence 4322 22233345678999999666555444 33 678888776543211 1122334567899998654 555556
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..++....... .+ ..........+++. .+..+++-...+.|..++
T Consensus 223 ~~~~I~~~~~dG~~~~--~~--~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 223 KHHVIERANLDGSHRK--AV--ISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp TTTEEEEEETTSCSCE--EE--ECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCceE--EE--EeCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 6778988887643321 11 11122334566663 345555665666666654
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.89 E-value=0.23 Score=47.67 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=38.7
Q ss_pred CcEEEEeCCCCceEEeEEecCcc--------CCEEEEEEc-CCCC---EEEEEECCCcEEEEEcCCCCce
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNGQ---FLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~--------~~v~~l~~~-~~~~---~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
+.|..+|..+|+.........|. .++. +... .+|+ .++.++.+|.++++|..+.+.+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 57999999999876555444342 2222 2222 4664 6888999999999998776543
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.85 E-value=0.3 Score=45.53 Aligned_cols=159 Identities=12% Similarity=0.127 Sum_probs=89.1
Q ss_pred CEEEEEECCC-C-CEEEEEeCCCcEEEeecccCCCcccceeeeecc--CcCceeEEEE-------CCCCCEEEEEECCC-
Q psy18091 52 RVWNVSWNPQ-G-TMISSCGEDKNIRLWGKESFGNKFTAKAILSDG--HQRTIRETAW-------SPCGNFIASASFDA- 119 (377)
Q Consensus 52 ~V~~v~~~~~-g-~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~--h~~~V~~~~~-------~~~~~~l~s~s~d~- 119 (377)
.-..++|+|. + .++++....+.|++.|.+. .... .+...+ .......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~--~~v~--~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKN--RMLS--SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTT--TEEE--EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCC--CEEE--EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 4578999983 4 4444444446677777652 1221 121111 2234788999 99998666665543
Q ss_pred ------cEEEEeCCC-CceEE---eEEecCccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcC-------CCCc------
Q psy18091 120 ------TTAVWDKRS-GQFEC---NATLEGHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVG-------EEDE------ 175 (377)
Q Consensus 120 ------~i~iwd~~~-~~~~~---~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~-------~~~~------ 175 (377)
.+.+++... +.+.. ...+... .....++++|+ +..+++-..++.|..+|+. +...
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 255665332 23210 0111111 23456788995 4555566677889999986 3321
Q ss_pred -----eeEEEEeeccccceeEEEEeeCCcE-EEEeeCCCcEEEEecC
Q psy18091 176 -----YECAAVINAHIQDVKKVRFHPFDNI-LASASYDDTVKLFKED 216 (377)
Q Consensus 176 -----~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~s~dg~i~~~~~~ 216 (377)
....... ........++|+|+++. +++-+....|+.++..
T Consensus 295 ~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1111111 12234568999999984 6666677888886643
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.82 E-value=0.23 Score=43.59 Aligned_cols=197 Identities=8% Similarity=-0.026 Sum_probs=116.0
Q ss_pred CCEEEEEECCC-CCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQ-GTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~-g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
....+++|++. +.+..+-...+.|+.++.+.. .. ...+... .......+++.+. ++..++-...+.|.+++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~--~~-~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--ES-VQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS--SC-CCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCC--Cc-eEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 34678899985 445566666788888877632 11 1111111 2234567888874 45555555678899999865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
..... ...........+++.|.+.+++.+.. .+.|...++...... ..........+.++++|++ .++++-+
T Consensus 111 ~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~---~~~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 111 SLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF---IIINSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp CSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE---EEEECCCCCccEEEEeccCCEEEEEEC
Confidence 43221 22234456789999987666666653 477888877643321 1122233456789999865 4555656
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..++....... .+. .........+++.. +..+.+-...+.|..++.
T Consensus 186 ~~~~I~~~d~dG~~~~--~~~--~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 186 KLNFIHKSNLDGTNRQ--AVV--KGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp TTTEEEEEETTSCSCE--EEE--CSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEcCCCCceE--EEe--cCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 6788999887643321 111 11223345666653 345556556677777664
No 282
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.81 E-value=0.18 Score=42.21 Aligned_cols=193 Identities=11% Similarity=0.053 Sum_probs=105.3
Q ss_pred ceeEEEECCCCCEEEEEECC--CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce
Q psy18091 99 TIRETAWSPCGNFIASASFD--ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
-...+.|++ +.+..+.+.+ ..|+.+|+.+++......+..+. .-..+++. .++.+...-.++.+.+||..+....
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 455788886 5666666665 48999999999876555544321 12334443 2344445557889999998776433
Q ss_pred eEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCC---cceEEEEEcCCCCeEEEeeCC
Q psy18091 177 ECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHT---STVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D 253 (377)
. .+..... ...+.+++..|..+..++.|.++|....+.. .......+. ..++.+.+. +|..++..-.+
T Consensus 99 ~---ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~--~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s 169 (243)
T 3mbr_X 99 A---RFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQV--GSIKVTAGGRPLDNLNELEWV-NGELLANVWLT 169 (243)
T ss_dssp E---EEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEE-TTEEEEEETTT
T ss_pred E---EEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEE--EEEEEccCCcccccceeeEEe-CCEEEEEECCC
Confidence 2 2322211 2234466777777777889999998754321 111111121 234556655 45555555456
Q ss_pred CcEEEEeeeCCCCCCCCCC----CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEeC
Q psy18091 254 ATVKIWKEYKPGNSAGIPT----PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATACG 310 (377)
Q Consensus 254 ~~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 310 (377)
..|.+.|.....-...+.. +... ......+...+.|++.|.++.|++.+.
T Consensus 170 ~~I~vIDp~tG~V~~~idl~~l~~~~~-------~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 170 SRIARIDPASGKVVAWIDLQALVPDAD-------ALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEECTTTCBEEEEEECGGGSTTTT-------SCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEECCCCCEEEEEECCcCccccc-------cccCCcCCceEEEEEcCCCCEEEEECC
Confidence 7787777432211000000 0000 000012346788999998776665544
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.73 E-value=0.33 Score=44.12 Aligned_cols=203 Identities=10% Similarity=-0.029 Sum_probs=117.1
Q ss_pred cCCEEEEEECCCCCE-EEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC-CCCEEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTM-ISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP-CGNFIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~-l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~~~l~s~s~d~~i~iwd~~ 127 (377)
.+.+.+++|++.+.. ..+-...+.|+.++.+..........+. .........+++.+ .+++.++-...+.|.+.++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 456889999986554 4555566788888765211001111222 22334567889988 45555565667889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE-EEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL-ASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~ 204 (377)
....... +.........+++.|.+.+|+.... .+.|...++....... .........+.+++++.+..| ++-
T Consensus 190 g~~~~~l--~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~---~~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 190 GVKRKTL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp TCSEEEE--EECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE---EECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEE--EeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE---EEECCCCceEEEEEEeCCCEEEEEE
Confidence 6543322 2223456789999997666665553 3678888876543221 223334567889999876544 555
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..+++...... .+......-.....+++. .+..+.+....+.|..++.
T Consensus 265 ~~~~~I~~~d~dG~~~~--~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp TTTTEEEEEETTSCCCE--EEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred CCCCEEEEEeCCCCccE--EEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 56778888887653321 111111112233456653 2445566666677777663
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.12 Score=48.32 Aligned_cols=160 Identities=9% Similarity=0.168 Sum_probs=94.9
Q ss_pred eeEEEECCC-CC-EEEEEECCCcEEEEeCCCCceEEeEEecC-ccCCEEEEEE-------cCCCCEEEEEECCC------
Q psy18091 100 IRETAWSPC-GN-FIASASFDATTAVWDKRSGQFECNATLEG-HENEVKSVTW-------SKNGQFLATCSRDK------ 163 (377)
Q Consensus 100 V~~~~~~~~-~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-h~~~v~~l~~-------~~~~~~l~s~~~dg------ 163 (377)
-..++|+|. .. ++++-...+.|++.|..++.+........ .......++| ++++++++.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457899983 44 44444445678889988876654322211 2235899999 99999777776654
Q ss_pred -cEEEEEcCCCCcee--E-EEEeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecC-------cccc-----c-----
Q psy18091 164 -SVWVWEVGEEDEYE--C-AAVINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKED-------KAEA-----D----- 221 (377)
Q Consensus 164 -~v~~wd~~~~~~~~--~-~~~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~-------~~~~-----~----- 221 (377)
.|.+.+......+. . ...+.. ......++++|. +.++++-..++.|..+++. .... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 25566533311221 0 011111 223556788995 5666777788889999986 2221 0
Q ss_pred ceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEee
Q psy18091 222 WINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKE 261 (377)
Q Consensus 222 ~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~ 261 (377)
...+... +....-..++|+|+|.. +++-+....|+.++.
T Consensus 300 ~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 0011111 12234578999999994 556666778887664
No 285
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.68 E-value=0.2 Score=41.09 Aligned_cols=188 Identities=15% Similarity=0.173 Sum_probs=98.5
Q ss_pred CCEEEEEeCCCcEEEeecccCCC-cccceeeeeccC--cCceeEEEECCCCCEEEEEECCCcEEEEeCCCCceE----Ee
Q psy18091 62 GTMISSCGEDKNIRLWGKESFGN-KFTAKAILSDGH--QRTIRETAWSPCGNFIASASFDATTAVWDKRSGQFE----CN 134 (377)
Q Consensus 62 g~~l~s~s~D~~v~~W~~~~~~~-~~~~~~~~~~~h--~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~----~~ 134 (377)
..+|+...+| +++.=....... .+..+. ...++ -..+..++|+|+|.+.+. .++.+.-.+..+.... ..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a-~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARA-TLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHS-EEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhc-cccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 4567777777 655433221110 110111 11122 247889999999886666 5676655555442110 01
Q ss_pred EEec--CccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCcee----EEEEeeccccceeEEEEeeCCcEEEEeeCCC
Q psy18091 135 ATLE--GHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYE----CAAVINAHIQDVKKVRFHPFDNILASASYDD 208 (377)
Q Consensus 135 ~~~~--~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg 208 (377)
..+. +... -.++.|.|+|.+.++ .||.|.-++-.+...-. ...+-..-=..+..+.+.|+|.+.++. |+
T Consensus 80 t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CC
Confidence 1111 1112 478999999987777 56988877753322110 011112122467889999999998888 67
Q ss_pred cEEEEecC-cccccceeeeeccc--CCcceEEEEEcCCCCeEEEeeCCCcEEEEeee
Q psy18091 209 TVKLFKED-KAEADWINFATLKS--HTSTVWSLAFDRIGSRLATCSDDATVKIWKEY 262 (377)
Q Consensus 209 ~i~~~~~~-~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~ 262 (377)
.++-.... .....|.......+ .-..-.-+.|.+++.+++.. ++ ++|...
T Consensus 155 ~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 155 QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDY 207 (236)
T ss_dssp EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEES
T ss_pred cEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecC
Confidence 65433221 12222321112211 22233456789988877666 66 556543
No 286
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.49 E-value=0.42 Score=42.47 Aligned_cols=193 Identities=10% Similarity=0.033 Sum_probs=111.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCc
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~ 130 (377)
..+|.+..+++.++++. ...|+..+.+. ... ..+. . .......++|++....| ++-...+.|..++...+.
T Consensus 35 ~~~C~~~~~~~~ll~~~--~~~I~~i~~~g--~~~--~~~~-~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 35 RRSCKALGPEPVLLFAN--RIDIRQVLPHR--SEY--TLLL-N-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp SSCEEESSSCCEEEEEC--BSCEEEECTTS--CCE--EEEE-C-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCcccccccCceeEeec--ccceEEEeCCC--Cee--EEee-c-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34566666655455443 34577776642 222 1122 2 23457889999865554 444567888888887654
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEeeCC-
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASASYD- 207 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d- 207 (377)
.+. ...........+++.+.+.. +++-...+.|.+.++...... ............++++|.+. ++++-...
T Consensus 107 ~~~--~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~---~l~~~~l~~P~~iavdp~~g~ly~td~~~~ 181 (349)
T 3v64_C 107 VEE--VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK---VLLWQSLEKPRAIALHPMEGTIYWTDWGNT 181 (349)
T ss_dssp CEE--EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECTTCSCEEEEEEETTTTEEEEEECSSS
T ss_pred ceE--EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE---EEEeCCCCCcceEEEecCcCeEEEeccCCC
Confidence 332 22222334578888875554 455555678999888654321 12333345578899998655 44554444
Q ss_pred CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCe-EEEeeCCCcEEEEee
Q psy18091 208 DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSR-LATCSDDATVKIWKE 261 (377)
Q Consensus 208 g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~iw~~ 261 (377)
+.|..+++...... .+ ....-.....+++++++.. +++-+..+.|..++.
T Consensus 182 ~~I~r~~~dG~~~~--~~--~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 182 PRIEASSMDGSGRR--II--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp CEEEEEETTSCSCE--ES--CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCCcE--EE--EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 67887776543221 11 1122334678999986654 455566677888774
No 287
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.47 E-value=0.58 Score=44.96 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=47.6
Q ss_pred EEECCCCCEEEEEECC----------------CcEEEEeCCCCceEEeEEecCcc--------CCEEEEEEc-CCC---C
Q psy18091 103 TAWSPCGNFIASASFD----------------ATTAVWDKRSGQFECNATLEGHE--------NEVKSVTWS-KNG---Q 154 (377)
Q Consensus 103 ~~~~~~~~~l~s~s~d----------------~~i~iwd~~~~~~~~~~~~~~h~--------~~v~~l~~~-~~~---~ 154 (377)
.++.+....+..+..+ +.|..+|..+|+.........|. .++. +... .+| +
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~ 324 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARK 324 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEE
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEE
Confidence 3455666666666544 37889999999876555544442 2222 2222 467 4
Q ss_pred EEEEEECCCcEEEEEcCCCCce
Q psy18091 155 FLATCSRDKSVWVWEVGEEDEY 176 (377)
Q Consensus 155 ~l~s~~~dg~v~~wd~~~~~~~ 176 (377)
.++.++.+|.+.+.|.++.+.+
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEE
T ss_pred EEEEECCCcEEEEEECCCCCEe
Confidence 6777889999999998877544
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.46 E-value=0.82 Score=45.48 Aligned_cols=202 Identities=9% Similarity=-0.026 Sum_probs=113.5
Q ss_pred cCCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~ 127 (377)
...+.+++|++... +..+-...+.|+.++++..........++ .........+++.+.+. +.++-...+.|.+.++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 45678899998544 55566666788888775211001112222 22334567889988664 55555667889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE-EEEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI-LASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~ 204 (377)
...... .+.........|++.|.+.+|+.+.. . +.|...++...... ..........+.|++++.+.. +++-
T Consensus 502 G~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~---~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 502 GVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY---SLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE---EEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE---EEEeCCCCCceEEEEecCCCeEEEEe
Confidence 554332 22233456889999997666665553 2 67888887654321 223333456788999976554 4554
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
...+.|..+++...... .+......-.....|++.. +.++++-...+.|...+
T Consensus 577 ~~~~~I~~~d~dG~~~~--~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 577 SKLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp TTTTEEEEEETTSCSCE--EEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEecCCCceE--EEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEe
Confidence 55677888887644321 1111111112233555533 24445555556665554
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.44 E-value=0.46 Score=42.29 Aligned_cols=241 Identities=13% Similarity=0.132 Sum_probs=116.2
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee--eeccCcCceeEEEECCC---CCEEEEEEC-C-----C
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI--LSDGHQRTIRETAWSPC---GNFIASASF-D-----A 119 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~--~~~~h~~~V~~~~~~~~---~~~l~s~s~-d-----~ 119 (377)
..-+.++|.|+|.++++ ..++.|++++ . +. .....- ...........++|+|+ +..|..+.. + +
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~-~--g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR-E--GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE-T--TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE-C--CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 35679999999986665 4569999887 2 11 110000 01112345788999998 444443332 2 5
Q ss_pred cEEEEeCCCCceE---E-eEEec---CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCC----Cc
Q psy18091 120 TTAVWDKRSGQFE---C-NATLE---GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEE----DE 175 (377)
Q Consensus 120 ~i~iwd~~~~~~~---~-~~~~~---~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~----~~ 175 (377)
.|..++...+... . ...+. +.......++|.|+|..+++.+. .|.|.-++.... +.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 6777776544221 1 11122 11112358999999976665432 145555554320 00
Q ss_pred e-----eEEEEeeccccceeEEEEee-CCcEEEEeeCCCc--------EEEEecCcccccc-------------eeeeec
Q psy18091 176 Y-----ECAAVINAHIQDVKKVRFHP-FDNILASASYDDT--------VKLFKEDKAEADW-------------INFATL 228 (377)
Q Consensus 176 ~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~dg~--------i~~~~~~~~~~~~-------------~~~~~~ 228 (377)
+ .....+.........++|+| .+.++++-..... |.+.... ....| .+...+
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG-GNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccC-CcCCCCcccCCCCCCCCcCCeEec
Confidence 0 00001111123456788999 5666665443333 3333211 10001 011122
Q ss_pred ccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEE
Q psy18091 229 KSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATA 308 (377)
Q Consensus 229 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 308 (377)
..| .....++| .+|..+++.-..+.|...++...+.... .......+.. ...+.++.+.|++.++++.
T Consensus 265 ~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~--------~~~~~~~~~~--~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 265 PQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWR--------VLRVETALSG--FGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEE--------EEEEEEEEES--SCCEEEEEECTTSCEEEEE
T ss_pred CCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCccee--------ecchheeccc--CCCeeEEEECCCCcEEEEE
Confidence 222 23456777 5577666666666676665432111000 0000111111 2356788888887766654
Q ss_pred e
Q psy18091 309 C 309 (377)
Q Consensus 309 ~ 309 (377)
.
T Consensus 333 ~ 333 (352)
T 2ism_A 333 S 333 (352)
T ss_dssp C
T ss_pred e
Confidence 3
No 290
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.33 E-value=0.6 Score=42.41 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=90.4
Q ss_pred CCCCEEEEEECCCcEEEEeCCCC-ceEEeEEecC--ccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC---------
Q psy18091 107 PCGNFIASASFDATTAVWDKRSG-QFECNATLEG--HENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEED--------- 174 (377)
Q Consensus 107 ~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~--h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~--------- 174 (377)
.+|..++.+- ++.||.-++..+ .++. ...+. .-..|..+..+|+|++|+..+ +..|.+-.+....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~-L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHS-LNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEE-EECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceE-EecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 3455554443 567776666522 2221 12221 112577899999999988884 5679998887321
Q ss_pred -ceeEEEEeec------cccceeEEEEeeCC---cEEEEeeCCCcEEEEecCcccccceeee------ecccCCcceEEE
Q psy18091 175 -EYECAAVINA------HIQDVKKVRFHPFD---NILASASYDDTVKLFKEDKAEADWINFA------TLKSHTSTVWSL 238 (377)
Q Consensus 175 -~~~~~~~~~~------~~~~v~~~~~~~~~---~~l~s~s~dg~i~~~~~~~~~~~~~~~~------~~~~h~~~v~~~ 238 (377)
...+ ..+.- ...+|..+.|||-+ ..|++-..|+.|++||+.........+. ........|.++
T Consensus 107 ~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred cccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 1122 11221 23569999999964 6899999999999999876332221111 112233678899
Q ss_pred EEcCCCCeEEE--eeCCCcEEE
Q psy18091 239 AFDRIGSRLAT--CSDDATVKI 258 (377)
Q Consensus 239 ~~~~~~~~l~s--~s~D~~i~i 258 (377)
+|..++--|.. .+..|-|.-
T Consensus 186 ~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 186 EFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EECTTSSCEEEEECTTSCEEEE
T ss_pred EEcCCCcEEEEEecCCCCCEEE
Confidence 99997765554 457777754
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.32 E-value=0.52 Score=41.69 Aligned_cols=193 Identities=12% Similarity=0.187 Sum_probs=109.0
Q ss_pred CCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC----CCC---EEEEEEC---CCcEEEEeC--CC
Q psy18091 61 QGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP----CGN---FIASASF---DATTAVWDK--RS 128 (377)
Q Consensus 61 ~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~----~~~---~l~s~s~---d~~i~iwd~--~~ 128 (377)
..+++++...++-+.++|+. +... .. +. ...++.+..-| .|+ ++++... ++++++|++ .+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~--G~~l--~~-~~---~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~ 110 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD--GKML--HS-YN---TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN 110 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT--SCEE--EE-EC---CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred CccEEEEEcCCCCEEEEcCC--CcEE--EE-cc---CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence 44677777777889999985 2222 11 11 13455554444 232 2333333 578999955 45
Q ss_pred CceEEeEE----ecCccCCEEEEEE--cCC-CC-EEEEEECCCcEEEEEcCCC----CceeEEEEeeccccceeEEEEee
Q psy18091 129 GQFECNAT----LEGHENEVKSVTW--SKN-GQ-FLATCSRDKSVWVWEVGEE----DEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 129 ~~~~~~~~----~~~h~~~v~~l~~--~~~-~~-~l~s~~~dg~v~~wd~~~~----~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
+++..... +..-...+..+++ +|. ++ |++....+|.+..|++... ...+....+... ..+..|...+
T Consensus 111 ~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd 189 (355)
T 3amr_A 111 GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADD 189 (355)
T ss_dssp CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEET
T ss_pred CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcC
Confidence 54432211 0011145566677 674 44 6888889999999998532 122223333332 3577888898
Q ss_pred CCcEEEEeeCCCcEEEEecCcccc-cceeeeec-ccC-CcceEEEEE--cCCCC-eEEEee-CCCcEEEEeee
Q psy18091 197 FDNILASASYDDTVKLFKEDKAEA-DWINFATL-KSH-TSTVWSLAF--DRIGS-RLATCS-DDATVKIWKEY 262 (377)
Q Consensus 197 ~~~~l~s~s~dg~i~~~~~~~~~~-~~~~~~~~-~~h-~~~v~~~~~--~~~~~-~l~s~s-~D~~i~iw~~~ 262 (377)
....|..+-++.-|..++.+.... ....+... .++ ...+..++. .++++ +|++++ .+++..+||..
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 889999999986665555432211 01112222 122 235777777 45555 555555 57789999853
No 292
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.16 E-value=0.73 Score=41.84 Aligned_cols=150 Identities=14% Similarity=0.181 Sum_probs=91.0
Q ss_pred CCCCCEEEEEeCCCcEEEeecccCCCcccceeeeecc--CcCceeEEEECCCCCEEEEEECCCcEEEEeCCCCc------
Q psy18091 59 NPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDG--HQRTIRETAWSPCGNFIASASFDATTAVWDKRSGQ------ 130 (377)
Q Consensus 59 ~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~------ 130 (377)
+.+|..++.+ .++.||.-++.... ..+.+-... --..|..+..+|+|++||..+ +..|.|-.+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~---~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDS---LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCS---SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCC---cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence 4456655554 34677766665311 122221121 123578899999999999876 5678888776321
Q ss_pred -----eEEe-EEecC----ccCCEEEEEEcCC---CCEEEEEECCCcEEEEEcCCCCceeE-------EEEeecccccee
Q psy18091 131 -----FECN-ATLEG----HENEVKSVTWSKN---GQFLATCSRDKSVWVWEVGEEDEYEC-------AAVINAHIQDVK 190 (377)
Q Consensus 131 -----~~~~-~~~~~----h~~~v~~l~~~~~---~~~l~s~~~dg~v~~wd~~~~~~~~~-------~~~~~~~~~~v~ 190 (377)
..+. ..+.. ...+|..+.|+|- +..|++-..|+.|++||+........ ..........+.
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEE
Confidence 1111 11111 2467999999995 45899999999999999986322111 001122335688
Q ss_pred EEEEeeCCcEEEE--eeCCCcEEEE
Q psy18091 191 KVRFHPFDNILAS--ASYDDTVKLF 213 (377)
Q Consensus 191 ~~~~~~~~~~l~s--~s~dg~i~~~ 213 (377)
+++|.+++-.|-. .+.+|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999887654444 5578888754
No 293
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.08 E-value=0.72 Score=41.02 Aligned_cols=190 Identities=12% Similarity=0.107 Sum_probs=105.0
Q ss_pred EEEEECCCCCEEEEEe------------CCCcEEEeecccCCCcccceeeeecc-----CcCceeEEEECC--CCC-EEE
Q psy18091 54 WNVSWNPQGTMISSCG------------EDKNIRLWGKESFGNKFTAKAILSDG-----HQRTIRETAWSP--CGN-FIA 113 (377)
Q Consensus 54 ~~v~~~~~g~~l~s~s------------~D~~v~~W~~~~~~~~~~~~~~~~~~-----h~~~V~~~~~~~--~~~-~l~ 113 (377)
-.+...|+|..+++++ .+|.|.++|.+....... .+...+ ..-....+.+.+ ++. +|+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~--~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS--ELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE--ECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE--EEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 4566788886655552 689999999863222211 111111 111334445443 443 343
Q ss_pred EE-EC--CCcEEEEeCC--CCceEEeEEecCc-cCCEEEEEEcCCCCEEEEEEC-----------------CCcEEEEEc
Q psy18091 114 SA-SF--DATTAVWDKR--SGQFECNATLEGH-ENEVKSVTWSKNGQFLATCSR-----------------DKSVWVWEV 170 (377)
Q Consensus 114 s~-s~--d~~i~iwd~~--~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~~~-----------------dg~v~~wd~ 170 (377)
.+ .. +..+.+|++. .+.......+.+. -...+.+.+.++|.++++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 22 4677787654 3444434444432 246789999999988777641 244554543
Q ss_pred CCCCceeEEEEeeccccceeEEEEeeCCcEEEE-eeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcC-CCCeEE
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHPFDNILAS-ASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDR-IGSRLA 248 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 248 (377)
. ... .........+.++|+|+++.+.. -+..+.|..|++.... .......+ ........++.++ +|.+.+
T Consensus 211 --~-~~~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g-~l~~~~~~-~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 211 --N-DVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW-TLTPLRVL-SFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp --T-CCE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-CEEEEEEE-ECSSEEEEEEECTTTCCEEE
T ss_pred --C-eEE---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC-cEecCEEE-eCCCCCceEEEeCCCCcEEE
Confidence 2 111 12223455788999999976554 4567889999876321 11111122 1234566788888 588777
Q ss_pred EeeCC
Q psy18091 249 TCSDD 253 (377)
Q Consensus 249 s~s~D 253 (377)
++..+
T Consensus 283 a~~~~ 287 (355)
T 3sre_A 283 GCHPN 287 (355)
T ss_dssp EEESC
T ss_pred EecCC
Confidence 66644
No 294
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.97 E-value=0.58 Score=44.82 Aligned_cols=58 Identities=10% Similarity=0.007 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 162 DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 162 dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
+|.|..||+.+.+....... . .....-.....+.+++.++.||.++.||.+..+..|.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-~---~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-H---LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-S---SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cceEEEEECCCCCEEEEecC-C---CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 57788888887764432221 1 1111111223477888899999999999987776553
No 295
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.96 E-value=0.81 Score=40.69 Aligned_cols=153 Identities=9% Similarity=0.059 Sum_probs=83.1
Q ss_pred CCEEEEEECC--CCC-EE-EEEeC--CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC---C---
Q psy18091 51 GRVWNVSWNP--QGT-MI-SSCGE--DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF---D--- 118 (377)
Q Consensus 51 ~~V~~v~~~~--~g~-~l-~s~s~--D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~---d--- 118 (377)
..-..+.+.+ +|. +| +.... +.+|.+|+.+..+........+........+++++.++|.+.++..- |
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 3556666644 343 33 33222 46777887764332222211121122335678899999987776541 1
Q ss_pred ---------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE-CCCcEEEEEcCCCCceeEEEEeeccccc
Q psy18091 119 ---------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS-RDKSVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 119 ---------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
..-++|-+..++... +...-...+.++|+||+++++.+. ..+.|+.|++.....+.....+. ....
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~~~~~---~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~ 267 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPNDVRV---VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTL 267 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTTCCEE---EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSE
T ss_pred ccchhhccCCccEEEEEECCeEEE---eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCC
Confidence 122333333333221 112234678999999998776654 57889999987544333222332 1233
Q ss_pred eeEEEEee-CCcEEEEeeCC
Q psy18091 189 VKKVRFHP-FDNILASASYD 207 (377)
Q Consensus 189 v~~~~~~~-~~~~l~s~s~d 207 (377)
.-.+++.+ +|++.+++..+
T Consensus 268 PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEECTTTCCEEEEEESC
T ss_pred CceEEEeCCCCcEEEEecCC
Confidence 45677777 47777766544
No 296
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.92 E-value=0.51 Score=43.68 Aligned_cols=109 Identities=7% Similarity=0.098 Sum_probs=63.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecC------ccCCEEEEEEcCC---CCEEEEEE-C------
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEG------HENEVKSVTWSKN---GQFLATCS-R------ 161 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~------h~~~v~~l~~~~~---~~~l~s~~-~------ 161 (377)
..-..++|.|+|+++++-...+.|.+++..+++......+.. ....+..++|+|+ +.+|+... .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 345789999999977765444568888766565443333321 2456789999995 44444333 2
Q ss_pred ------CCcEEEEEcCCCC-ce---e-EEEEee-ccccceeEEEEeeCCcEEEEeeC
Q psy18091 162 ------DKSVWVWEVGEED-EY---E-CAAVIN-AHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 162 ------dg~v~~wd~~~~~-~~---~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
...|.-++..... .+ + ....+. ........+.|.|+|.++++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1245555553321 11 1 111111 11224678999999988887554
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.70 E-value=0.051 Score=53.44 Aligned_cols=202 Identities=10% Similarity=-0.012 Sum_probs=107.8
Q ss_pred CCEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+..|+ +-...+.|+.+++...........++ .........+++.+. ++++++-...+.|.++++..
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 3456788988666554 44456788888775310000111111 111123456788864 45555545568899999875
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-C-CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR-D-KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-d-g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
..... .+.........+++.|.+.+|+.+.. . +.|...++....... .........+.|+++|.+ .++++-.
T Consensus 485 ~~~~~--l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~---l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 485 VKRKT--LFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS---LVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp CCEEE--ECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE---ESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred CceEE--EEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE---EEeCCCCCccEEEEeccCCEEEEEec
Confidence 54322 22222345578889886655544433 2 677777665432211 112223446679999875 5556666
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
..+.|..+++...... .+............+++..+ .++++....+.|..++.
T Consensus 560 ~~~~I~~~d~dG~~~~--~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRK--TILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp TTTEEEEECSSSSCCE--EECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CCCeEEEEccCCCceE--EEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 7788999987643221 11111111112234455443 45556666778877763
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.54 E-value=1.2 Score=39.56 Aligned_cols=106 Identities=12% Similarity=0.110 Sum_probs=61.7
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe---cCccCCEEEEEEcCC---CCEEEEEEC----C----C
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL---EGHENEVKSVTWSKN---GQFLATCSR----D----K 163 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~---~~h~~~v~~l~~~~~---~~~l~s~~~----d----g 163 (377)
..-..++|.|+|+++++ ..++.|.+++ ..++ .....+ .........++++|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34578899999985554 5669999887 4554 322222 122356889999997 444444332 2 5
Q ss_pred cEEEEEcCCCC-ce---e-EEEEee-ccccceeEEEEeeCCcEEEEeeC
Q psy18091 164 SVWVWEVGEED-EY---E-CAAVIN-AHIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 164 ~v~~wd~~~~~-~~---~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
.|..|+..... .. + ....+. ........+.|.|+|.++++.+.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 67777765431 11 1 111111 11123467899999988887543
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.34 E-value=0.58 Score=38.42 Aligned_cols=109 Identities=18% Similarity=0.148 Sum_probs=63.5
Q ss_pred CCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCce---eEEEEe-eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCc
Q psy18091 142 NEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEY---ECAAVI-NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDK 217 (377)
Q Consensus 142 ~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~ 217 (377)
..+..++|+|+|...+. .+|.++-.+..+.... .....+ ...-.....+.|.|++.+.++ .||.|+-++...
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36779999999986555 6777665554331110 001111 111112467889999999888 559887776532
Q ss_pred -ccccceeeeecccC--CcceEEEEEcCCCCeEEEeeCCCcE
Q psy18091 218 -AEADWINFATLKSH--TSTVWSLAFDRIGSRLATCSDDATV 256 (377)
Q Consensus 218 -~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s~D~~i 256 (377)
....|..-....+. =..+..+.|.|+|.+.+.. |+.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 22233211111111 1357899999999987776 7764
No 300
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.31 E-value=1 Score=41.54 Aligned_cols=108 Identities=14% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeec-----cCcCceeEEEECCC---CCEE-EEEEC----
Q psy18091 51 GRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSD-----GHQRTIRETAWSPC---GNFI-ASASF---- 117 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----~h~~~V~~~~~~~~---~~~l-~s~s~---- 117 (377)
..-+.++|.|+|.++++-...+.|++++... + .......+.. ........++|+|+ +..| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~-g-~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES-G-SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT-C-CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC-C-cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 4568999999999887765445688776432 1 1111100111 12345678999995 4444 33332
Q ss_pred --------CCcEEEEeCCC--CceE---EeE-Eec-CccCCEEEEEEcCCCCEEEEEE
Q psy18091 118 --------DATTAVWDKRS--GQFE---CNA-TLE-GHENEVKSVTWSKNGQFLATCS 160 (377)
Q Consensus 118 --------d~~i~iwd~~~--~~~~---~~~-~~~-~h~~~v~~l~~~~~~~~l~s~~ 160 (377)
...|.-++... +.+. ... .+. ........++|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 12444444322 2221 111 122 1123478999999998766654
No 301
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.96 E-value=4.2 Score=42.38 Aligned_cols=188 Identities=12% Similarity=0.117 Sum_probs=96.3
Q ss_pred cCCEEEEEECCC------CCEEEEEeC-CCcEEEeecccCCCcccceeeeeccCcCceeEEEEC--CCCCEEEEEECCCc
Q psy18091 50 QGRVWNVSWNPQ------GTMISSCGE-DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWS--PCGNFIASASFDAT 120 (377)
Q Consensus 50 ~~~V~~v~~~~~------g~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~~~l~s~s~d~~ 120 (377)
.+.|.|+++.|. +++++.|.. |++|+++++..... . .....+-.....++.+. ....+|..|-.||.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-~---~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~ 628 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-L---HKEMLGGEIIPRSILMTTFESSHYLLCALGDGA 628 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-E---EEEECCSSCCEEEEEEEEETTEEEEEEEETTSE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-E---EEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCe
Confidence 357999999763 368888886 99999999864221 1 11111111122333222 23457888889998
Q ss_pred EEEE--eCCCCceEEeE-EecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeecccccee-EEEEee
Q psy18091 121 TAVW--DKRSGQFECNA-TLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVK-KVRFHP 196 (377)
Q Consensus 121 i~iw--d~~~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~-~~~~~~ 196 (377)
+.-+ |..+|.+.... .+-| ..++.-..+...+..-+-+..+....++.-+ ..+.. ..+ ....+. ...|+.
T Consensus 629 l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~--~~l~~-s~l--~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 629 LFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN--HKLVF-SNV--NLKEVNYMCPLNS 702 (1158)
T ss_dssp EEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS--SSEEE-EEB--SSSCCCEEEEECC
T ss_pred EEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC--CceEE-ecc--ChHHhceEeccCc
Confidence 8655 44456554332 2222 3455544554444443333445555555432 22211 111 112232 234544
Q ss_pred CC--cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 197 FD--NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 197 ~~--~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
.. +-++..+ ++.+++..+...+ .| ...++ .-...+..++++|..+.++.+.
T Consensus 703 e~~~~g~v~~~-~~~LrI~~i~~~~-~~-~~~~i-pL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 703 DGYPDSLALAN-NSTLTIGTIDEIQ-KL-HIRTV-PLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp SSSTTEEEEEC-SSCEEEEEECCSS-SE-EEEEE-ECSSEEEEEEEEGGGTEEEEEE
T ss_pred ccCCCcEEEEc-CCceEEEEecccC-Ce-eEEEE-eCCCCceEEEEcCCCCEEEEEE
Confidence 32 3444443 4569988765432 22 11111 2234678899998877655544
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.91 E-value=1.9 Score=38.21 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=61.7
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEec---CccCCEEEEEEcCC---CCEEEEEEC-C-----CcEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLE---GHENEVKSVTWSKN---GQFLATCSR-D-----KSVW 166 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~h~~~v~~l~~~~~---~~~l~s~~~-d-----g~v~ 166 (377)
.-..++|.|+|+++++ ..++.|.+++ .++......+. ........++|+|+ +.+|+.+.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568899999986654 5679999998 45433222221 22456889999998 445444433 2 5677
Q ss_pred EEEcCCCCc--ee-EEEEee---ccccceeEEEEeeCCcEEEEee
Q psy18091 167 VWEVGEEDE--YE-CAAVIN---AHIQDVKKVRFHPFDNILASAS 205 (377)
Q Consensus 167 ~wd~~~~~~--~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~s 205 (377)
.++...... .. ....+. ........+.|.|+|.++++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 787764211 11 111122 1112346789999998777754
No 303
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.81 E-value=2.2 Score=38.39 Aligned_cols=230 Identities=6% Similarity=-0.036 Sum_probs=123.9
Q ss_pred EEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCceeEEE
Q psy18091 102 ETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDEYECAA 180 (377)
Q Consensus 102 ~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~ 180 (377)
+.+..+. .+|+.+ ....|+..++..+..... .. ....+..++|.+.+..|+ +-...+.|+.+++...... .
T Consensus 81 C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~--~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---~ 152 (386)
T 3v65_B 81 CKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLL--LN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---E 152 (386)
T ss_dssp EEECSSC-CEEEEE-CBSCEEEECTTSCCCEEE--EC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE---E
T ss_pred ECCcccc-ceeEee-cCccceeeccCCCcEEEE--ec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE---E
Confidence 3344443 344433 346788888876654322 22 234688999997655554 4446678888888765321 2
Q ss_pred EeeccccceeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCC-CcEE
Q psy18091 181 VINAHIQDVKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDD-ATVK 257 (377)
Q Consensus 181 ~~~~~~~~v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D-~~i~ 257 (377)
...........+++++. +.++++-...+.|.+.++...... ......-.....++++|.+..|. +-... +.|.
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~----~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK----VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE----EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE----EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 22223334567888875 556666667788888877543221 11122234567899998766544 44444 5666
Q ss_pred EEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeec
Q psy18091 258 IWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHT 336 (377)
Q Consensus 258 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~ 336 (377)
..++.. ... ..+....-...+.|++++.++.|..+. ..+.|..++...... .. ++ .
T Consensus 229 r~~~dG--~~~--------------~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~~--~~-~ 285 (386)
T 3v65_B 229 ASSMDG--SGR--------------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR----KA--VI-S 285 (386)
T ss_dssp EEETTS--CSC--------------EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC----EE--EE-C
T ss_pred EEeCCC--CCc--------------EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee----EE--EE-E
Confidence 555321 100 011111112457888987766555554 456777776432110 00 11 1
Q ss_pred cccceecceeEEEecCCCCceEEEeeCCCcEEEEe
Q psy18091 337 EHRAHNQDVNCVAWNPVVPGMLASCSDDGDVKLWQ 371 (377)
Q Consensus 337 ~~~~h~~~v~~v~~~p~~~~~laS~s~Dg~i~iWd 371 (377)
.. ......+++. ++.++.+-...+.|...+
T Consensus 286 ~~---~~~P~giav~--~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 286 QG---LPHPFAITVF--EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp SS---CSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred CC---CCCceEEEEE--CCEEEEeeCCCCeEEEEE
Confidence 11 1223455553 345666766777777766
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.37 E-value=2.2 Score=36.59 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=84.7
Q ss_pred CCCEEEEEeCC----CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECC------CcEEEEeCCCCc
Q psy18091 61 QGTMISSCGED----KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFD------ATTAVWDKRSGQ 130 (377)
Q Consensus 61 ~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~ 130 (377)
++.+++.||.+ ..+.++|..+ ..+......... ...-..+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~--~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVK--DSWYSKLGPPTP-RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTT--TEEEEEECCSSC-CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCC--CeEEECCCCCcc-ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 56677777765 4566777653 222221111111 111111222 56677777765 458889998887
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEEC---------CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSR---------DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNIL 201 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~---------dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (377)
......+......-..+.+ +++.++.|+. -..+.+||+.+.. +.....+......-. + ..-++.++
T Consensus 130 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~-~-~~~~~~i~ 204 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEARKNHG-L-VFVKDKIF 204 (306)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSCCBSCE-E-EEETTEEE
T ss_pred eEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCe-EEECCCccchhhcce-E-EEECCEEE
Confidence 6543332221111122222 5555555543 3458889987653 221111111111111 1 22256777
Q ss_pred EEeeCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 202 ASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 202 ~s~s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+.|+.+ ..+.+||+... .|..+..+.........+.+ ++..++.|+.+
T Consensus 205 v~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 257 (306)
T 3ii7_A 205 AVGGQNGLGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQ 257 (306)
T ss_dssp EECCEETTEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--TTEEEEEECBC
T ss_pred EEeCCCCCCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEE--CCEEEEEeCcC
Confidence 777654 35777887643 35444332222222223333 45666777754
No 305
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.33 E-value=2.9 Score=37.77 Aligned_cols=178 Identities=9% Similarity=0.018 Sum_probs=102.6
Q ss_pred CCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEE-EEEECCCcEEEEeCCCCc--eEEeEEecCccCCEEEE
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFI-ASASFDATTAVWDKRSGQ--FECNATLEGHENEVKSV 147 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~l 147 (377)
...|+..+++. .... .+. .....+..++|++.+..| .+-...+.|..+++.... ......+.........+
T Consensus 91 ~~~I~~i~l~~--~~~~--~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 164 (400)
T 3p5b_L 91 RHEVRKMTLDR--SEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 164 (400)
T ss_dssp TTEEEEECTTS--CSCE--EEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEE
T ss_pred cceeEEEccCC--ccee--Eec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccE
Confidence 36788877763 2111 111 234567899999865554 444456788888876421 01112233334567889
Q ss_pred EEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC--CCcEEEEecCccccccee
Q psy18091 148 TWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY--DDTVKLFKEDKAEADWIN 224 (377)
Q Consensus 148 ~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~--dg~i~~~~~~~~~~~~~~ 224 (377)
++.+.+.. +++-...+.|.+.++...... ............++++|.+..|..... .+.|...++......
T Consensus 165 avD~~~~~lY~~d~~~~~I~~~~~~g~~~~---~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~--- 238 (400)
T 3p5b_L 165 AVDWIHSNIYWTDSVLGTVSVADTKGVKRK---TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--- 238 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTTCSEE---EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE---
T ss_pred EEEecCCceEEEECCCCeEEEEeCCCCceE---EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE---
Confidence 99885444 445456678888887654321 223333455788999997655544442 367888777643321
Q ss_pred eeecccCCcceEEEEEcCCCCeEE-EeeCCCcEEEEee
Q psy18091 225 FATLKSHTSTVWSLAFDRIGSRLA-TCSDDATVKIWKE 261 (377)
Q Consensus 225 ~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~iw~~ 261 (377)
......-.....+++++.+..|. +-+..+.|..++.
T Consensus 239 -~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~ 275 (400)
T 3p5b_L 239 -SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 275 (400)
T ss_dssp -EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred -EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeC
Confidence 11112224567899998766554 5555677877774
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.94 E-value=2.7 Score=35.93 Aligned_cols=181 Identities=13% Similarity=0.147 Sum_probs=86.6
Q ss_pred CCCEEEEEeCC-----CcEEEeecccCCC-cccceeeeeccCcCceeEEEECCCCCEEEEEECC-----CcEEEEeCCCC
Q psy18091 61 QGTMISSCGED-----KNIRLWGKESFGN-KFTAKAILSDGHQRTIRETAWSPCGNFIASASFD-----ATTAVWDKRSG 129 (377)
Q Consensus 61 ~g~~l~s~s~D-----~~v~~W~~~~~~~-~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 129 (377)
++.+++.||.+ ..+.++|..+... .+......... ...-..+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 46677777765 3577887764210 02211111111 111111222 56666777643 35788998888
Q ss_pred ceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 130 QFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 130 ~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+......+......-..+.+ +++.++.|+.+ ..+..||+.+.. +.....+......... ..-++.+++.|
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~--~~~~~~i~v~G 213 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGV--ALLNDHIYVVG 213 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEE--EEETTEEEEEC
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceE--EEECCEEEEEe
Confidence 76654443322222222222 56666666554 458888887652 2211111111111112 22356777888
Q ss_pred eCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 205 SYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 205 s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
+.+ ..+.+||+... .|..+..+.........+.+ +++.++.|+.+
T Consensus 214 G~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTD--SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYD 263 (301)
T ss_dssp CBCSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred CCCCCcccceEEEEeCCCC--cEEECCCCCCcccceeEEEE--CCEEEEEcCcC
Confidence 764 45788887643 35443322211111222222 45666677655
No 307
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.90 E-value=3.1 Score=36.56 Aligned_cols=98 Identities=12% Similarity=0.104 Sum_probs=45.7
Q ss_pred CCCEEEEEeCC-CcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC-C---------CcEEEEeCCCC
Q psy18091 61 QGTMISSCGED-KNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF-D---------ATTAVWDKRSG 129 (377)
Q Consensus 61 ~g~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~-d---------~~i~iwd~~~~ 129 (377)
++++.+.||.+ ..+..+|.......+....-........-..+.+ +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 45666666644 4577777653122332111111000111111222 4666666665 2 46888999887
Q ss_pred ceEEeEEec-CccCCEEEEEEcCCCCEEEEEECC
Q psy18091 130 QFECNATLE-GHENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 130 ~~~~~~~~~-~h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
+......+. .-.....++. .+++.++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 765433222 1111122222 466667777654
No 308
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.87 E-value=3.2 Score=36.66 Aligned_cols=156 Identities=17% Similarity=0.162 Sum_probs=86.2
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe----cCccCCEEEEEEcCC---CCEEEEE-E--CCCcEEE
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL----EGHENEVKSVTWSKN---GQFLATC-S--RDKSVWV 167 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----~~h~~~v~~l~~~~~---~~~l~s~-~--~dg~v~~ 167 (377)
..-+.++|.|+|+.+++--..|.|++++..+++......+ .........++++|+ +.+|+.. + .+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 3467899999999877765589999998766654333222 223457889999995 3344332 2 3445655
Q ss_pred EEcCCCC----c---ee-EEEEee-ccccceeEEEEeeCCcEEEEeeC-------------CCcEEEEecCcccc--cce
Q psy18091 168 WEVGEED----E---YE-CAAVIN-AHIQDVKKVRFHPFDNILASASY-------------DDTVKLFKEDKAEA--DWI 223 (377)
Q Consensus 168 wd~~~~~----~---~~-~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~-------------dg~i~~~~~~~~~~--~~~ 223 (377)
|.+.... . .. ....+. ........+.|.|++.++++.+. .|.|.-.+....-+ +.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 6654411 1 11 111121 11123567899999988887543 24444444432200 000
Q ss_pred -e-eeecccCCcceEEEEEcCCCCeEEEe-eCCC
Q psy18091 224 -N-FATLKSHTSTVWSLAFDRIGSRLATC-SDDA 254 (377)
Q Consensus 224 -~-~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~ 254 (377)
. ..-..+|.+ ...++|+|+|.++++- +.|+
T Consensus 192 ~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 192 PGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp TTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSS
T ss_pred CCCeEEeeCCCC-cceEEECCCCCEEEEecCCCC
Confidence 0 011124543 3478999988876654 3444
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.80 E-value=2.9 Score=35.78 Aligned_cols=180 Identities=15% Similarity=0.212 Sum_probs=83.3
Q ss_pred CCCEEEEEeCCC-----cEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCC-----cEEEEeCCCCc
Q psy18091 61 QGTMISSCGEDK-----NIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDA-----TTAVWDKRSGQ 130 (377)
Q Consensus 61 ~g~~l~s~s~D~-----~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 130 (377)
++.+++.||.++ .+.++|..+ ..+......... ...-..+.+ +++.++.|+.++ .+.+||+.+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVK--DQWTSVANMRDR-RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTT--TEEEEECCCSSC-CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCC--CceeeCCCCCcc-ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 566777777553 466777653 222211111000 111111222 566677776553 46788888877
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECC-------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRD-------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILAS 203 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 203 (377)
......+.........+.+ +++.++.|+.+ ..+..||+.+.. +.....+.........+ .-++.+++.
T Consensus 136 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~--~~~~~iyv~ 210 (302)
T 2xn4_A 136 WFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTRRSGAGVG--VLNNLLYAV 210 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSCCBSCEEE--EETTEEEEE
T ss_pred EeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccccccccEE--EECCEEEEE
Confidence 6544332221111222222 55555555432 358888887653 22111111111111112 235777888
Q ss_pred eeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 204 ASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 204 ~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
|+.++ .+.+||.... .|..+..+.........+.+ ++..++.|+.++
T Consensus 211 GG~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCCCcccceEEEEeCCCC--CEeeCCCCCCccccCeEEEE--CCEEEEECCcCC
Confidence 87653 5778887643 35443322211111112222 456666776553
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.79 E-value=5.9 Score=39.37 Aligned_cols=181 Identities=12% Similarity=0.026 Sum_probs=100.3
Q ss_pred CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEE-EEEECCCcEEEEEcCCCCce-eEEEEeeccccceeEEEE
Q psy18091 117 FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFL-ATCSRDKSVWVWEVGEEDEY-ECAAVINAHIQDVKKVRF 194 (377)
Q Consensus 117 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~s~~~dg~v~~wd~~~~~~~-~~~~~~~~~~~~v~~~~~ 194 (377)
....|+..++........ . .....+..++|.+....| ++-...+.|+.+++...... .....+.........|++
T Consensus 402 n~~~Ir~i~l~~~~~~~l--~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv 478 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSL--I-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 478 (791)
T ss_dssp CBSSEEEECTTSCCCEEE--E-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE
T ss_pred cccceeEeeccCCcceee--e-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee
Confidence 346688888776544322 2 234567899999855544 44445677888887643110 111223334456778999
Q ss_pred eeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeE-EEeeCC-CcEEEEeeeCCCCCCCCC
Q psy18091 195 HPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRL-ATCSDD-ATVKIWKEYKPGNSAGIP 271 (377)
Q Consensus 195 ~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D-~~i~iw~~~~~~~~~~~~ 271 (377)
.+.+ +++++-...+.|.+.++...... ..+.........|+++|.+.+| ++-... +.|...++. +..
T Consensus 479 D~~~~~LY~tD~~~~~I~v~~ldG~~~~----~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~~---- 548 (791)
T 3m0c_C 479 DWIHSNIYWTDSVLGTVSVADTKGVKRK----TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVD---- 548 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSSSEE----EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCC----
T ss_pred eecCCcEEEEecCCCeEEEEeCCCCeEE----EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CCc----
Confidence 8776 66677777889999988644321 1112233457899999975544 443222 556655432 110
Q ss_pred CCCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeC
Q psy18091 272 TPDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKEN 320 (377)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~ 320 (377)
..++....-.....|++.+..+.|+.+. ..+.|..++..
T Consensus 549 ----------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 549 ----------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp ----------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ----------eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 0111111123566788887666665554 44566666653
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.76 E-value=0.95 Score=40.23 Aligned_cols=106 Identities=8% Similarity=0.022 Sum_probs=58.2
Q ss_pred ceeEEEECCCCC-EEEEEECCCcEEEEeCCCCceEE-eE----EecCccCCEEEEEEcCC---CCEEEEE-EC-------
Q psy18091 99 TIRETAWSPCGN-FIASASFDATTAVWDKRSGQFEC-NA----TLEGHENEVKSVTWSKN---GQFLATC-SR------- 161 (377)
Q Consensus 99 ~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~-~~----~~~~h~~~v~~l~~~~~---~~~l~s~-~~------- 161 (377)
.-..++|.|+|+ .++ +...+.|++++.. +.... .. ...........++++|+ +.+|+.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457889999998 554 5567999998853 32210 00 11122346789999995 4444433 22
Q ss_pred CCcEEEEEcCCCC-ceeEEE-Eeec------cccceeEEEEeeCCcEEEEeeC
Q psy18091 162 DKSVWVWEVGEED-EYECAA-VINA------HIQDVKKVRFHPFDNILASASY 206 (377)
Q Consensus 162 dg~v~~wd~~~~~-~~~~~~-~~~~------~~~~v~~~~~~~~~~~l~s~s~ 206 (377)
...|..|++.... .+.... .+.. .......+.|.|++.++++-+.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 2346666664331 111111 1111 1112457999999977777544
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.73 E-value=0.61 Score=45.78 Aligned_cols=155 Identities=7% Similarity=-0.016 Sum_probs=85.5
Q ss_pred CceeEEEECCCCCEEEEE-ECCCcEEEEeCCC----CceEEeEEecCccCCEEEEEEcCCC-CEEEEEECCCcEEEEEcC
Q psy18091 98 RTIRETAWSPCGNFIASA-SFDATTAVWDKRS----GQFECNATLEGHENEVKSVTWSKNG-QFLATCSRDKSVWVWEVG 171 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~-s~d~~i~iwd~~~----~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~~~dg~v~~wd~~ 171 (377)
..+..++|++.+..|..+ ...+.|..+++.. .... ..+.........+++.+.+ +.+++-...+.|.+.++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 345678899866555544 4457888888764 1111 1111111234567777544 444444556789888876
Q ss_pred CCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-C-CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCC-eEE
Q psy18091 172 EEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-D-DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGS-RLA 248 (377)
Q Consensus 172 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-d-g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 248 (377)
.... ...+.........++++|.+..|..+.. . +.|..+++...... .+ ....-.....|+|++++. +++
T Consensus 484 g~~~---~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~--~l--~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 484 GVKR---KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SL--VTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp SCCE---EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC--EE--SCSSCSSCCCEEECTTTCCEEE
T ss_pred CCce---EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee--EE--EeCCCCCccEEEEeccCCEEEE
Confidence 5421 1122222344667889987654444432 2 67777766533221 01 111123345789998755 555
Q ss_pred EeeCCCcEEEEee
Q psy18091 249 TCSDDATVKIWKE 261 (377)
Q Consensus 249 s~s~D~~i~iw~~ 261 (377)
+-+..+.|..+++
T Consensus 557 aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 557 VDSKLHSISSIDV 569 (699)
T ss_dssp EETTTTEEEEECS
T ss_pred EecCCCeEEEEcc
Confidence 6666778888875
No 313
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.49 E-value=3.8 Score=36.21 Aligned_cols=202 Identities=12% Similarity=0.164 Sum_probs=111.7
Q ss_pred CCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeC----Cc---EEEEee-C--CCcEEEEecCccccc
Q psy18091 152 NGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPF----DN---ILASAS-Y--DDTVKLFKEDKAEAD 221 (377)
Q Consensus 152 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~s-~--dg~i~~~~~~~~~~~ 221 (377)
....++.....+-+.+||+. ++.+ ..+.. ..++.+.+-|. ++ ++++.. . +..|.+|++......
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~-G~~l---~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLD-GKML---HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETT-SCEE---EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcCC-CcEE---EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 34567777788899999994 3332 22322 45666666552 22 223333 3 578999976422222
Q ss_pred ceeeeec--c-cCC-cceEEEEE--cCC-CC-eEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCCcce
Q psy18091 222 WINFATL--K-SHT-STVWSLAF--DRI-GS-RLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHGRTI 293 (377)
Q Consensus 222 ~~~~~~~--~-~h~-~~v~~~~~--~~~-~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 293 (377)
+..+... . ... ..+..+++ ++. +. +++....+|.+..|++.....- ....+.+.++.. +..+
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g--------~~~~~lVR~f~l--gsq~ 182 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG--------YISGKKVRAFKM--NSQT 182 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS--------CEEEEEEEEEEC--SSCE
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC--------cccceEEEEecC--CCCc
Confidence 2222111 0 011 34555666 664 44 5777888899999987532111 112344555543 3467
Q ss_pred eEEEecccCCEEEEEeCCCcEEEEEeCCCCCCCcceeeeeeecccccee-cceeEEEec--CCC-CceEEEeeCCCcEEE
Q psy18091 294 YDISWCHLTDLIATACGDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHN-QDVNCVAWN--PVV-PGMLASCSDDGDVKL 369 (377)
Q Consensus 294 ~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~--p~~-~~~laS~s~Dg~i~i 369 (377)
..+...+....|+.+-++..|-.++..+..+.... ++.....+|- ..+..|+.- +.+ +.+|+|+=.+.+..+
T Consensus 183 EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~----~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~V 258 (355)
T 3amr_A 183 EGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGT----VIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAI 258 (355)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCE----EEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEE
T ss_pred ceEEEcCCCCeEEEecccceEEEEeCCcCCCCCce----EEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEE
Confidence 77877788889999999866444443343321111 1211112232 368888874 322 246777767788999
Q ss_pred Eecc
Q psy18091 370 WQIK 373 (377)
Q Consensus 370 Wd~~ 373 (377)
||.+
T Consensus 259 ydr~ 262 (355)
T 3amr_A 259 YDRQ 262 (355)
T ss_dssp EESS
T ss_pred EECC
Confidence 9986
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.97 E-value=3.9 Score=34.87 Aligned_cols=135 Identities=13% Similarity=0.187 Sum_probs=64.2
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCc--eeEEEEeeccccceeE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDE--YECAAVINAHIQDVKK 191 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~--~~~~~~~~~~~~~v~~ 191 (377)
..+.+||..+++......+.........+. .+++.++.|+.+ ..+.+||..+... +.....+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 357788888776554332222111112222 255666666654 4688999876541 2222111111111112
Q ss_pred EEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC-----cEEEEee
Q psy18091 192 VRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA-----TVKIWKE 261 (377)
Q Consensus 192 ~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~iw~~ 261 (377)
+ ..++.+++.|+.++ .+.+||.... .|..+..+......-..+.+ +++.++.|+.++ .+..||.
T Consensus 109 ~--~~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 109 T--TLGDMIYVSGGFDGSRRHTSMERYDPNID--QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp E--EETTEEEEECCBCSSCBCCEEEEEETTTT--EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred E--EECCEEEEEcccCCCcccceEEEEcCCCC--eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeC
Confidence 2 22577778877543 4667776533 34443332211111122222 466777777653 3555553
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.90 E-value=4.1 Score=34.97 Aligned_cols=111 Identities=14% Similarity=0.203 Sum_probs=56.8
Q ss_pred CCCEEEEEECC-----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCcee
Q psy18091 108 CGNFIASASFD-----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYE 177 (377)
Q Consensus 108 ~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~ 177 (377)
+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+.+ ..+..||+.+.. +.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE-WR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE-EE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe-Ee
Confidence 56666666543 4578899888776544332221122222222 55666666544 458888886642 22
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeCC-----CcEEEEecCcccccceee
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINF 225 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~ 225 (377)
....+.........+.+ ++.+++.|+.+ ..+.+||+... .|..+
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~ 246 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFV 246 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEEC
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC--cEEEC
Confidence 11111111111122222 57777888765 45778887643 35443
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.85 E-value=7.2 Score=37.62 Aligned_cols=193 Identities=6% Similarity=-0.069 Sum_probs=113.5
Q ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+..| .+-..++.|+.++.+. .. .+.+...+ ......+++++.+. ..++-...+.|.+.++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g--~~--~~~v~~~g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG--SA--LEHVVEFG-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC--CC--cEEEEeCC-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 467899999866554 4556678888887652 11 12222222 23467788887544 445555577888988865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCc-EEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDN-ILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 205 (377)
..... .+.........+++.|...+|+-... .+.|...++....... +.......+.+++++.++ ++++-.
T Consensus 112 ~~~~~--l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~----l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 112 QHRQV--LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT----LVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp TTCEE--EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE----EECSCSSEEEEEEETTTTEEEEEET
T ss_pred CcEEE--EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE----EECCCCCcceEEEccccCEEEEEEC
Confidence 43322 22233456789999986656665553 4667777776543221 112345678899999754 555556
Q ss_pred CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 206 YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 206 ~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..+.|..+++...... .+. ........+++.. +..++|-...+.|...|
T Consensus 186 ~~~~I~~~d~dG~~~~--v~~---~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 186 DTNLIESSNMLGLNRE--VIA---DDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp TTTEEEEEETTSCSCE--EEE---ECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcCCCCceE--Eee---ccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 6778888887654331 111 1122234566654 44455555556665555
No 317
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.64 E-value=4.7 Score=35.03 Aligned_cols=221 Identities=7% Similarity=-0.053 Sum_probs=116.8
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCE-EEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEee
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQF-LATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHP 196 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~-l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 196 (377)
...|+..++..........+.+ .....+++|.+.... +.+-...+.|..+++....... ............+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCCCccEEEEEc
Confidence 4568888876553111111111 235678999985544 4454566788888886653211 11222234566788987
Q ss_pred -CCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee--CCCcEEEEeeeCCCCCCCCCCC
Q psy18091 197 -FDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS--DDATVKIWKEYKPGNSAGIPTP 273 (377)
Q Consensus 197 -~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s--~D~~i~iw~~~~~~~~~~~~~~ 273 (377)
.++++++-...+.|.++++....... ...........++++|.+..|.... ..+.|...++. +...
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~----l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~----- 157 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKV----LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSR----- 157 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEE----EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSC-----
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEE----EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCe-----
Confidence 45666777777889999876433211 1112334567899998655544333 24556555432 1110
Q ss_pred CCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEecC
Q psy18091 274 DNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWNP 352 (377)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p 352 (377)
..+....-..-+.++++++++.|..+. ..+.|..++...... . .+.. +.......+++..
T Consensus 158 ---------~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~----~---~~~~---~~~~~P~glav~~ 218 (318)
T 3sov_A 158 ---------FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR----Q---AVVK---GSLPHPFALTLFE 218 (318)
T ss_dssp ---------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----E---EEEC---SCCSCEEEEEEET
T ss_pred ---------EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce----E---EEec---CCCCCceEEEEeC
Confidence 011000112457888988766555554 566777776543210 0 0111 1112234455543
Q ss_pred CCCceEEEeeCCCcEEEEecc
Q psy18091 353 VVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 353 ~~~~~laS~s~Dg~i~iWd~~ 373 (377)
+.++.+-...+.|...+..
T Consensus 219 --~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 219 --DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp --TEEEEEETTTTEEEEEETT
T ss_pred --CEEEEEecCCCeEEEEECC
Confidence 3466666666777777663
No 318
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.21 E-value=5.8 Score=35.03 Aligned_cols=154 Identities=14% Similarity=0.136 Sum_probs=81.4
Q ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceee---eeccCcCceeEEEECCC----CCEEEEEE--CCC
Q psy18091 49 HQGRVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAI---LSDGHQRTIRETAWSPC----GNFIASAS--FDA 119 (377)
Q Consensus 49 h~~~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~---~~~~h~~~V~~~~~~~~----~~~l~s~s--~d~ 119 (377)
.-..-+.++|.|||.++++--..|+|++++... + ....... +..........++++|+ +.+.++-+ .++
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~-g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKT-G-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTT-C-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCC-C-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 345678999999999888776689999886532 1 1111100 01122456788999995 43333322 344
Q ss_pred cEEEEeCCCC-----c---eEE-eEEec-CccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCC---
Q psy18091 120 TTAVWDKRSG-----Q---FEC-NATLE-GHENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEE--- 173 (377)
Q Consensus 120 ~i~iwd~~~~-----~---~~~-~~~~~-~h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~--- 173 (377)
.|.-|....+ . .+. ...+. ........++|.|||.++++.+. .|.|.-.+....
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~ 187 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP 187 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence 4555544331 1 111 11121 11113457999999987776542 245544444321
Q ss_pred -CceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 174 -DEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 174 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
+.+....++.........++|+|++.++++-
T Consensus 188 ~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 188 GNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp TCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred CCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 0000001222223456678999987766554
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.15 E-value=5 Score=34.19 Aligned_cols=126 Identities=14% Similarity=0.193 Sum_probs=56.8
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC-----CcEEEEEcCCCCceeEEEEeeccccceeEEE
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD-----KSVWVWEVGEEDEYECAAVINAHIQDVKKVR 193 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~ 193 (377)
..+..||..+.+......+......-..+.. +++.++.|+.+ ..+.+||..+.. +.....+.........+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~- 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQ-WTSVANMRDRRSTLGAA- 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCc-eeeCCCCCccccceEEE-
Confidence 3467788777665433222211111112222 55566666544 357888887653 22111111111111112
Q ss_pred EeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCC
Q psy18091 194 FHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDD 253 (377)
Q Consensus 194 ~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 253 (377)
.-++.+++.|+.++ .+..||+... .|..+..+.........+.+ +++.++.|+.+
T Consensus 106 -~~~~~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 165 (302)
T 2xn4_A 106 -VLNGLLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYD 165 (302)
T ss_dssp -EETTEEEEEEEECSSCEEEEEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred -EECCEEEEEcCCCCCccCceEEEEeCCCC--eEeecCCCCCcccCceEEEE--CCEEEEEeCCC
Confidence 23567777777654 3556776532 34443322221111122222 45666666643
No 320
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.88 E-value=5.8 Score=34.32 Aligned_cols=223 Identities=10% Similarity=-0.007 Sum_probs=119.4
Q ss_pred CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEE-EEECCCcEEEEEcCCCCc-eeEEEEeeccccceeEEEEe
Q psy18091 118 DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLA-TCSRDKSVWVWEVGEEDE-YECAAVINAHIQDVKKVRFH 195 (377)
Q Consensus 118 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~~~dg~v~~wd~~~~~~-~~~~~~~~~~~~~v~~~~~~ 195 (377)
...|+..|+.+++... .+. .......++|.+.+..++ +-...+.|..+++..... ......+.........++++
T Consensus 9 ~~~I~~i~~~~~~~~~--~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 85 (316)
T ss_dssp BSSEEEEETTSCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred CCeEEEEECCCcceEe--hhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEe
Confidence 4568888887765432 222 245678999998665554 444568899998865210 00111222233456788998
Q ss_pred eC-CcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE-EeeCC-CcEEEEeeeCCCCCCCCCC
Q psy18091 196 PF-DNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA-TCSDD-ATVKIWKEYKPGNSAGIPT 272 (377)
Q Consensus 196 ~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D-~~i~iw~~~~~~~~~~~~~ 272 (377)
+. ++++++-...+.|.++++...... .+ ..........++++|.+..|. +.... +.|...++. +..
T Consensus 86 ~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~--~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--G~~----- 154 (316)
T 1ijq_A 86 WIHSNIYWTDSVLGTVSVADTKGVKRK--TL--FRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GVD----- 154 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEE--EE--EECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCC-----
T ss_pred ecCCeEEEEECCCCEEEEEeCCCCceE--EE--EECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC--CCC-----
Confidence 64 566677777889999987643221 11 112234567899998666444 43332 566655531 110
Q ss_pred CCCCCcEEEEEeecCCCCcceeEEEecccCCEEEEEe-CCCcEEEEEeCCCCCCCcceeeeeeeccccceecceeEEEec
Q psy18091 273 PDNDSVWKCVCTLSGHHGRTIYDISWCHLTDLIATAC-GDDAIRIFKENPEAGDSDMVSFDLVHTEHRAHNQDVNCVAWN 351 (377)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 351 (377)
...+....-.....+++.+.++.|..+. ..+.|..++..... .. .+.... ........+++.
T Consensus 155 ---------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~----~~---~~~~~~-~~~~~P~giav~ 217 (316)
T 1ijq_A 155 ---------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN----RK---TILEDE-KRLAHPFSLAVF 217 (316)
T ss_dssp ---------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----CE---EEEECT-TTTSSEEEEEEE
T ss_pred ---------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc----eE---EEeecC-CccCCcEEEEEE
Confidence 0111111123467888888776665554 56688888764321 01 111100 011123455554
Q ss_pred CCCCceEEEeeCCCcEEEEecc
Q psy18091 352 PVVPGMLASCSDDGDVKLWQIK 373 (377)
Q Consensus 352 p~~~~~laS~s~Dg~i~iWd~~ 373 (377)
. +.++.+-...+.|..++..
T Consensus 218 ~--~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 218 E--DKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp T--TEEEEEETTTTEEEEEETT
T ss_pred C--CEEEEEECCCCeEEEEeCC
Confidence 3 4566676677777777653
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.62 E-value=6.3 Score=34.51 Aligned_cols=51 Identities=8% Similarity=0.011 Sum_probs=27.2
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEc
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEV 170 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~ 170 (377)
..+.+||..+.+......+..-...-.+++.. +++.++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 57889999888776554433211110222222 4555555543 245777876
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.52 E-value=6 Score=33.78 Aligned_cols=145 Identities=4% Similarity=0.052 Sum_probs=72.7
Q ss_pred CCCEEEEEECC----CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECC------CcEEEEEcCCCCcee
Q psy18091 108 CGNFIASASFD----ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRD------KSVWVWEVGEEDEYE 177 (377)
Q Consensus 108 ~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d------g~v~~wd~~~~~~~~ 177 (377)
+++.++.|+.+ ..+.+||..+++......+.........+.+ +++.++.|+.+ ..+.+||..+.. +.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES-WH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE-EE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc-eE
Confidence 56667777654 6688899988876544333321122222222 56666666654 458888887653 22
Q ss_pred EEEEeeccccceeEEEEeeCCcEEEEeeC---------CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEE
Q psy18091 178 CAAVINAHIQDVKKVRFHPFDNILASASY---------DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLA 248 (377)
Q Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---------dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 248 (377)
....+......-.. ..-++.+++.|+. -..+..||+... .|..+..+......-..+.+ +++.++
T Consensus 132 ~~~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v 205 (306)
T 3ii7_A 132 TKPSMLTQRCSHGM--VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFV--KDKIFA 205 (306)
T ss_dssp EECCCSSCCBSCEE--EEETTEEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred eCCCCcCCcceeEE--EEECCEEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEE--CCEEEE
Confidence 11111111111111 2235677777764 344778887643 35443322211111122222 456777
Q ss_pred EeeCCC-----cEEEEee
Q psy18091 249 TCSDDA-----TVKIWKE 261 (377)
Q Consensus 249 s~s~D~-----~i~iw~~ 261 (377)
.|+.++ .+.+||.
T Consensus 206 ~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp ECCEETTEEBCCEEEEET
T ss_pred EeCCCCCCCCceEEEeeC
Confidence 776543 4556654
No 323
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.76 E-value=21 Score=37.16 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=69.3
Q ss_pred CceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCC------CCEEEEEEC-CCcEEEEEc
Q psy18091 98 RTIRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKN------GQFLATCSR-DKSVWVWEV 170 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~------~~~l~s~~~-dg~v~~wd~ 170 (377)
..|...+.+. .+++.++ ++.+.++++..+++....... -...|.|+++.|. +++++.|.. |++++++.+
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 3566655543 4566555 677888877666544332222 3568999999863 368999997 999999999
Q ss_pred CCCCceeEEEEeeccccceeEEEEee--CCcEEEEeeCCCcEEEEecC
Q psy18091 171 GEEDEYECAAVINAHIQDVKKVRFHP--FDNILASASYDDTVKLFKED 216 (377)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~dg~i~~~~~~ 216 (377)
..-+... ...+.. .....++.+.. ...+|..|-.||.+.-+.+.
T Consensus 590 ~~l~~~~-~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 590 PSFELLH-KEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTCCEEE-EEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCeEE-EEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 7643322 222221 11233343332 23578899999988766543
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.98 E-value=18 Score=35.29 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCCCEEEEEeCC----CcEEEeecccCCCccccee-ee----eccCcCceeEEEECCCCCEEEEEECC------CcEEEE
Q psy18091 60 PQGTMISSCGED----KNIRLWGKESFGNKFTAKA-IL----SDGHQRTIRETAWSPCGNFIASASFD------ATTAVW 124 (377)
Q Consensus 60 ~~g~~l~s~s~D----~~v~~W~~~~~~~~~~~~~-~~----~~~h~~~V~~~~~~~~~~~l~s~s~d------~~i~iw 124 (377)
.++.+++.||.+ ..+.++|..+ ..+.... -. .......-..+.+..+++.++.|+.+ +.+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~--~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHY--DKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECS--SCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCC--CeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 456777778754 3566777653 2232211 00 00001111222332266777777654 346788
Q ss_pred eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCC--cEEEEEcCCCCceeEEEE---eeccccceeEEEEeeC-C
Q psy18091 125 DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDK--SVWVWEVGEEDEYECAAV---INAHIQDVKKVRFHPF-D 198 (377)
Q Consensus 125 d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~-~ 198 (377)
|..+.+......+..-... .+++...+++.++.|+.++ .+.+||..+.. +..... ..........+.++.. +
T Consensus 474 d~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp ETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred eCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCC
Confidence 9888766544322211111 1223324677777776654 68899987653 221111 1111112233455555 6
Q ss_pred cEEEEeeC--C-----CcEEEEecCcc
Q psy18091 199 NILASASY--D-----DTVKLFKEDKA 218 (377)
Q Consensus 199 ~~l~s~s~--d-----g~i~~~~~~~~ 218 (377)
.+++.|+. + ..+..||+...
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 67788765 2 34777887644
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.75 E-value=18 Score=34.88 Aligned_cols=196 Identities=8% Similarity=-0.003 Sum_probs=110.0
Q ss_pred CCEEEEEECCCCCEE-EEEeCCCcEEEeecccCCCcccceeeeec-----cCcCceeEEEECCCCC-EEEEEECCCcEEE
Q psy18091 51 GRVWNVSWNPQGTMI-SSCGEDKNIRLWGKESFGNKFTAKAILSD-----GHQRTIRETAWSPCGN-FIASASFDATTAV 123 (377)
Q Consensus 51 ~~V~~v~~~~~g~~l-~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----~h~~~V~~~~~~~~~~-~l~s~s~d~~i~i 123 (377)
..+.+++|++....| .+=...+.|+.++.+. .. ...++.. ........+++...++ ...+-+..+.|.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g--~~--~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v 415 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDG--SQ--GFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINV 415 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCC--CC--ceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEE
Confidence 457889998865544 4444567787776542 11 1112211 1233578899998755 4456667788999
Q ss_pred EeCCCCceEEeEEecCccCCEEEEEEcCC-CCEEEEEECCC--cEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcE
Q psy18091 124 WDKRSGQFECNATLEGHENEVKSVTWSKN-GQFLATCSRDK--SVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNI 200 (377)
Q Consensus 124 wd~~~~~~~~~~~~~~h~~~v~~l~~~~~-~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (377)
.++... ... ..+........++++.|. |..+.+-.... .|...++...... ..........+.+++++.++.
T Consensus 416 ~~~~G~-~~~-~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~---~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 416 TRLDGR-SVG-VVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTERE---VLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp EETTSC-EEE-EEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTE
T ss_pred EECCCC-eEE-EEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcE---EEEeccCCCccEEEEeCCCCE
Confidence 988643 322 223334567899999994 54444433332 4655555543321 122333455788999987654
Q ss_pred E-EEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 201 L-ASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 201 l-~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
| .+-+..+.|...++...... .+. .........++... +..+.+-.....|...+
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r~--~~~--~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~ 546 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANRI--VLE--DSNILQPVGLTVFE-NWLYWIDKQQQMIEKID 546 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCE--EEE--CSSCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCCceE--EEE--cCCCCCcEEEEEEC-CEEEEEECCCCeEEEEE
Confidence 4 55555688888888654321 111 12222345666654 45555655556665554
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.41 E-value=13 Score=32.81 Aligned_cols=152 Identities=10% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCc-ccceeeeeccCcCceeEEEECCC---CCEE-EEEEC-------
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNK-FTAKAILSDGHQRTIRETAWSPC---GNFI-ASASF------- 117 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~---~~~l-~s~s~------- 117 (377)
..-+.++|.|+|+ +++ +...+.|++++.+..... .................++++|+ +..| ++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4568999999999 555 456789988874310000 00000000112345678999995 4444 33222
Q ss_pred CCcEEEEeCCCC--ceEEeE-EecC------ccCCEEEEEEcCCCCEEEEEEC-------------CCcEEEEEcCCCC-
Q psy18091 118 DATTAVWDKRSG--QFECNA-TLEG------HENEVKSVTWSKNGQFLATCSR-------------DKSVWVWEVGEED- 174 (377)
Q Consensus 118 d~~i~iwd~~~~--~~~~~~-~~~~------h~~~v~~l~~~~~~~~l~s~~~-------------dg~v~~wd~~~~~- 174 (377)
...|..|+...+ .+.... .+.. .......++|.|||.++++.+. .|.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 224555555422 221111 1111 0112357999999965555433 1456666654320
Q ss_pred ---ce-----eEEEEeeccccceeEEEEee-CCcEEEE
Q psy18091 175 ---EY-----ECAAVINAHIQDVKKVRFHP-FDNILAS 203 (377)
Q Consensus 175 ---~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~s 203 (377)
.+ .....+.........++|+| .+.++++
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 00 00011111224567899999 5555554
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.28 E-value=19 Score=34.62 Aligned_cols=198 Identities=8% Similarity=-0.016 Sum_probs=111.5
Q ss_pred cCCEEEEEECCCCCEEE-EEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCC-EEEEEECCCcEEEEeCC
Q psy18091 50 QGRVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGN-FIASASFDATTAVWDKR 127 (377)
Q Consensus 50 ~~~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~-~l~s~s~d~~i~iwd~~ 127 (377)
.+...+++|++.+..|+ +-...+.|..++.+. .. ....+... -......+++++.+. ..++-...+.|.+.+..
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g--~~-~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNK--TE-SVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccC--CC-ceEEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence 34578999998666554 544567788777652 11 11222222 224578899998554 55555567889999987
Q ss_pred CCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEe
Q psy18091 128 SGQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASA 204 (377)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~ 204 (377)
...... ...........+++.|.+.+++-+.. .+.|...++....... .........+.+++++.+ .++++-
T Consensus 115 G~~~~~--l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~---l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 115 GSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI---IINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp SCSCEE--EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE---EECSSCSSEEEEEEETTTTEEEEEE
T ss_pred CCCEEE--EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEE---EEeCCCCCCcEEEEEccCCEEEEEe
Confidence 554322 22234456778999997666665553 3566666665433221 222234557889999865 555565
Q ss_pred eCCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEee
Q psy18091 205 SYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKE 261 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~ 261 (377)
...+.|..+++........ ......|. ..+++..+ ..+.+-...+.|...|.
T Consensus 190 ~~~~~I~~~~~dG~~~~~~-~~~~~~~P---~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQAV-VKGSLPHP---FALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp TTTCCEEEESSSCCEEC----------C---CCEEESSS-EEEEECTTTCSEEEEES
T ss_pred CCCCeEEEecCCCCccEEE-EeCCCCCc---eEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 6677888888765432111 01011222 34555544 44556556667766664
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.24 E-value=11 Score=32.09 Aligned_cols=145 Identities=11% Similarity=0.113 Sum_probs=66.5
Q ss_pred CCCEEEEEEC----CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC----C-----CcEEEEEcCCCC
Q psy18091 108 CGNFIASASF----DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----D-----KSVWVWEVGEED 174 (377)
Q Consensus 108 ~~~~l~s~s~----d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~----d-----g~v~~wd~~~~~ 174 (377)
++..++.|+. -..+.+||..+++......+..-...-..+.. +++.++.|+. + ..+.+||..+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3445555542 23577888877765543222211111112222 4555555554 2 457888887653
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCC-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYD-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
+.....+.........+. -++.+++.|+.+ ..+..||.... .|..+..+......-..+.+ ++..++.
T Consensus 102 -W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 102 -WSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp -EEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred -EeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCC--eEeECCCCCccccceEEEEE--CCEEEEE
Confidence 221111111111111222 256777777644 35677776543 34433222211111122222 4667777
Q ss_pred eeCCC-----cEEEEee
Q psy18091 250 CSDDA-----TVKIWKE 261 (377)
Q Consensus 250 ~s~D~-----~i~iw~~ 261 (377)
|+.++ .+..||.
T Consensus 175 GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYP 191 (308)
T ss_dssp CCBCSSCBCCCEEEEET
T ss_pred eCCCCCCcCceEEEEeC
Confidence 77653 3555653
No 329
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.14 E-value=22 Score=34.14 Aligned_cols=159 Identities=8% Similarity=0.025 Sum_probs=94.4
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCC-CCEEEEEECCCcEEEEeCCC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPC-GNFIASASFDATTAVWDKRS 128 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~ 128 (377)
..+.+++|++.+. +..+-...+.|+.++.+. .. ...+. .........+++.+. ++..++-+..+.|.+.++..
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g--~~--~~~v~-~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G 423 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDG--SG--SQFVV-TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG 423 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTS--CS--CEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCC--Cc--cEEEE-ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC
Confidence 3467888988544 444555567788887652 11 11222 122345678899874 44555555678899998865
Q ss_pred CceEEeEEecCccCCEEEEEEcCCCCEEEEEEC--CCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCC-cEEEEee
Q psy18091 129 GQFECNATLEGHENEVKSVTWSKNGQFLATCSR--DKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFD-NILASAS 205 (377)
Q Consensus 129 ~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~--dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s 205 (377)
.... ..+...-....++++.|...+++-+.. ...|...++...... ..........+.+++++.+ .++++-+
T Consensus 424 ~~~~--~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~---~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 424 TMRK--ILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV---VLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp CSCE--EEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE---EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CeEE--EEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE---EEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 4322 222334467889999997555554443 356666666544322 1223334567789999865 4455555
Q ss_pred CCCcEEEEecCccc
Q psy18091 206 YDDTVKLFKEDKAE 219 (377)
Q Consensus 206 ~dg~i~~~~~~~~~ 219 (377)
..+.|..+++....
T Consensus 499 ~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 499 KTDKIEVMNTDGTG 512 (619)
T ss_dssp TTTEEEEEESSSCC
T ss_pred CCCEEEEEecCCCc
Confidence 66788888876443
No 330
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.89 E-value=21 Score=32.91 Aligned_cols=112 Identities=8% Similarity=0.098 Sum_probs=58.9
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEeecccCCC--ccc-ceeeeecc----CcCceeEEEECCC----CCEEEEEECC
Q psy18091 51 GRVWNVSWNPQGT-MISSCGEDKNIRLWGKESFGN--KFT-AKAILSDG----HQRTIRETAWSPC----GNFIASASFD 118 (377)
Q Consensus 51 ~~V~~v~~~~~g~-~l~s~s~D~~v~~W~~~~~~~--~~~-~~~~~~~~----h~~~V~~~~~~~~----~~~l~s~s~d 118 (377)
..-+.++|.|||. +|+.+...|.|++++.+.... .+. ...++..+ .......++|+|+ +.+.++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4568999999996 455566789999996531100 000 00011111 1356788999996 4444433321
Q ss_pred ------------CcEEEEeCCCC--------ceEEeEEe--cCccCCEEEEEEcCCCCEEEEEECC
Q psy18091 119 ------------ATTAVWDKRSG--------QFECNATL--EGHENEVKSVTWSKNGQFLATCSRD 162 (377)
Q Consensus 119 ------------~~i~iwd~~~~--------~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~~~d 162 (377)
..|.-|.+..+ ..+....+ .........|+|.|||.++++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 12333544321 11111111 1112246789999999876665543
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.87 E-value=25 Score=34.23 Aligned_cols=68 Identities=10% Similarity=0.140 Sum_probs=40.3
Q ss_pred CCCCEEEEEECCC--cEEEEeCCCCceEEeEE---ecCccCCEEEEEEcCC-CCEEEEEEC--C-----CcEEEEEcCCC
Q psy18091 107 PCGNFIASASFDA--TTAVWDKRSGQFECNAT---LEGHENEVKSVTWSKN-GQFLATCSR--D-----KSVWVWEVGEE 173 (377)
Q Consensus 107 ~~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~---~~~h~~~v~~l~~~~~-~~~l~s~~~--d-----g~v~~wd~~~~ 173 (377)
.+++.++.|+.++ .+.+||..+........ +........++.+..+ ++.++.|+. + ..+..||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3677777777654 68899998887654332 1111111223445544 555666654 2 45888998776
Q ss_pred C
Q psy18091 174 D 174 (377)
Q Consensus 174 ~ 174 (377)
.
T Consensus 579 ~ 579 (695)
T 2zwa_A 579 N 579 (695)
T ss_dssp C
T ss_pred c
Confidence 5
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.49 E-value=20 Score=30.56 Aligned_cols=176 Identities=9% Similarity=0.079 Sum_probs=81.1
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEEC----C-------CcEEEEeCCCCceE
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASF----D-------ATTAVWDKRSGQFE 132 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~----d-------~~i~iwd~~~~~~~ 132 (377)
+++.|+ ..+..||..+ ..+.... . ..........+...+++.++.|+. + ..+..||..+++..
T Consensus 7 l~~~GG--~~~~~yd~~~--~~W~~~~-~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAA--NECYCAS-L-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEET--TEEEEEETTT--TEEEEEE-C-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEcC--CceEEECCCC--CeEecCC-C-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 344555 4578888763 3333211 1 111111122223346777777773 1 12667888887664
Q ss_pred EeEEecCccCCEEEEEEcCCCCEEEEEECC--------CcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEe
Q psy18091 133 CNATLEGHENEVKSVTWSKNGQFLATCSRD--------KSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 133 ~~~~~~~h~~~v~~l~~~~~~~~l~s~~~d--------g~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
....+......-..+.+ +++.++.|+.+ ..+.+||..+.. +.....+......- .....++.+++.|
T Consensus 81 ~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~--~~~~~~~~iyv~G 155 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYVVYGH--TVLSHMDLVYVIG 155 (315)
T ss_dssp ECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSCCBSC--EEEEETTEEEEEC
T ss_pred ECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCcccce--eEEEECCEEEEEe
Confidence 43222211111112222 45555555532 458888887652 22111111111111 1222456777887
Q ss_pred eC-C-----CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCC
Q psy18091 205 SY-D-----DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDA 254 (377)
Q Consensus 205 s~-d-----g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 254 (377)
+. + ..+..||.... .|..+..+......-..+.+ +++.++.|+.++
T Consensus 156 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 207 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTD 207 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECS
T ss_pred CCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCC
Confidence 76 2 35778887643 35443322211111122222 466777777654
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.24 E-value=29 Score=29.56 Aligned_cols=135 Identities=10% Similarity=0.103 Sum_probs=64.4
Q ss_pred CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC----C-------CcEEEEEcCCCCceeEEEEeecccc
Q psy18091 119 ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----D-------KSVWVWEVGEEDEYECAAVINAHIQ 187 (377)
Q Consensus 119 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~----d-------g~v~~wd~~~~~~~~~~~~~~~~~~ 187 (377)
..+..||..+++... ..+..............+++.++.|+. + ..+..||..+.. +.....+.....
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEECCCBSSCEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe-EEECCCCCcchh
Confidence 568899998887653 333322223333333456777777763 1 126778876643 211111111111
Q ss_pred ceeEEEEeeCCcEEEEeeCC--------CcEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeC-C-----
Q psy18091 188 DVKKVRFHPFDNILASASYD--------DTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSD-D----- 253 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~d--------g~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D----- 253 (377)
.-..+ .-++.+++.|+.+ ..+..||.... .|.....+......-..+. .+++.++.|+. +
T Consensus 91 ~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 91 LFGLG--EALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp SCEEE--EETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBC
T ss_pred ceeEE--EECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCccc
Confidence 11111 2256777777632 34777877543 3544332222111112222 24566777776 2
Q ss_pred CcEEEEee
Q psy18091 254 ATVKIWKE 261 (377)
Q Consensus 254 ~~i~iw~~ 261 (377)
..+.+||.
T Consensus 165 ~~~~~yd~ 172 (315)
T 4asc_A 165 NKMCVYDP 172 (315)
T ss_dssp CCEEEEET
T ss_pred ceEEEEeC
Confidence 24556653
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=78.83 E-value=73 Score=34.01 Aligned_cols=199 Identities=13% Similarity=0.203 Sum_probs=103.6
Q ss_pred ECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeec
Q psy18091 105 WSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINA 184 (377)
Q Consensus 105 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 184 (377)
.+|..+.||.-+ ..++.|||+.+........+ ..+|..-.|-.+. .++-.+ +..|..|++...... ...+..
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P--~k~fdR 144 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP--VKMFDR 144 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc---CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCcc--HHHHhc
Confidence 578877777665 78899999987643222222 2467777886444 333332 357999999653221 112222
Q ss_pred c----ccceeEEEEeeCCcEEEEee-------CCCcEEEEecCcccccceeeeecccCCcceEEEEEc--CCC-CeEEEe
Q psy18091 185 H----IQDVKKVRFHPFDNILASAS-------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFD--RIG-SRLATC 250 (377)
Q Consensus 185 ~----~~~v~~~~~~~~~~~l~s~s-------~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~-~~l~s~ 250 (377)
| ...|.....+++.++++..+ ..|.+.+|....... +.+.+|-+....+... +.. ..+.-+
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-----Q~iegha~~F~~~~~~~~~~~~~l~~f~ 219 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-----QPIEGHAASFAQFKMEGNAEESTLFCFA 219 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-----hhhhHhHhhhheeccCCCCCCceEEEEE
Confidence 2 23455556677777766433 457888998765433 2334454333222221 111 122211
Q ss_pred eC---CCcEEEEeeeCC--CCCCCCCCCCCCCcEEEEEeec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 251 SD---DATVKIWKEYKP--GNSAGIPTPDNDSVWKCVCTLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 251 s~---D~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
.. .+.++|-++..+ +. ........+ ..++ ...+.--..+..++.-+++...+..|.+.+|+..+..
T Consensus 220 ~~~~~g~kLhi~Ei~~~~~~~-~~f~kk~~~------~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 220 VRGQAGGKLHIIEVGTPPTGN-QPFPKKAVD------VFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EecCCCceEEEEecCCCccCC-CCCcccccc------ccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 11 267888876443 11 000000000 0000 0011112334455666788888899999999877653
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=71.56 E-value=11 Score=33.19 Aligned_cols=111 Identities=8% Similarity=0.031 Sum_probs=62.6
Q ss_pred CEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEc--CCCCEEEEE--ECCCcEEEEEcCCCCceeEEEEeecc
Q psy18091 110 NFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWS--KNGQFLATC--SRDKSVWVWEVGEEDEYECAAVINAH 185 (377)
Q Consensus 110 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~--~~~~~l~s~--~~dg~v~~wd~~~~~~~~~~~~~~~~ 185 (377)
..++.++.||.+.-.|..+|+........ ...++....-. +.+..++.+ ..||.|..++..++.... ..-...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~--~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL--PLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE--EEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe--eecccc
Confidence 46778899999999999999765433222 11222221100 112233333 589999999876652221 111110
Q ss_pred ccceeEEEEe-----------eCCcEEEEeeCCCcEEEEecCcccccce
Q psy18091 186 IQDVKKVRFH-----------PFDNILASASYDDTVKLFKEDKAEADWI 223 (377)
Q Consensus 186 ~~~v~~~~~~-----------~~~~~l~s~s~dg~i~~~~~~~~~~~~~ 223 (377)
.-....+... ..+..+.+|+.+|.+...|...++..|.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~ 136 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISA 136 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEE
Confidence 0011111211 1467788999999999999988877664
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=69.47 E-value=52 Score=27.94 Aligned_cols=137 Identities=13% Similarity=0.175 Sum_probs=63.5
Q ss_pred CCCEEEEEECC-------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC------CCcEEEEEcCCCC
Q psy18091 108 CGNFIASASFD-------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR------DKSVWVWEVGEED 174 (377)
Q Consensus 108 ~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~------dg~v~~wd~~~~~ 174 (377)
+++.++.|+.+ ..+.+||..+.+......+......-..+. .+++.++.|+. -..+.+||..+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56666677654 347788988876654322221111111222 35555555543 2358889987653
Q ss_pred ceeEEEEeeccccceeEEEEeeCCcEEEEeeCCC-----cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEE
Q psy18091 175 EYECAAVINAHIQDVKKVRFHPFDNILASASYDD-----TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLAT 249 (377)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg-----~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 249 (377)
+.............. +. .-++.+++.|+.++ .+.+||+... .|..+..+.........+.+ ++..++.
T Consensus 187 -W~~~~~~p~~r~~~~-~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 259 (318)
T 2woz_A 187 -WKDLAPMKTPRSMFG-VA-IHKGKIVIAGGVTEDGLSASVEAFDLKTN--KWEVMTEFPQERSSISLVSL--AGSLYAI 259 (318)
T ss_dssp -EEEECCCSSCCBSCE-EE-EETTEEEEEEEEETTEEEEEEEEEETTTC--CEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred -EEECCCCCCCcccce-EE-EECCEEEEEcCcCCCCccceEEEEECCCC--eEEECCCCCCcccceEEEEE--CCEEEEE
Confidence 221111111111111 22 23567777776543 3556776533 35443332221111122222 3556666
Q ss_pred eeCC
Q psy18091 250 CSDD 253 (377)
Q Consensus 250 ~s~D 253 (377)
|+.+
T Consensus 260 GG~~ 263 (318)
T 2woz_A 260 GGFA 263 (318)
T ss_dssp CCBC
T ss_pred CCee
Confidence 6654
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=65.57 E-value=70 Score=28.03 Aligned_cols=201 Identities=12% Similarity=0.166 Sum_probs=110.3
Q ss_pred EECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee
Q psy18091 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN 183 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 183 (377)
-.+|..+.||.-+ ...+.+||+++.+......+ ..+|..-.|-.+. .|+-.+ +..|+.|++...... ...++
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~---~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P--~kvFd 144 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQP--VKMFD 144 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC---SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCC--EEEEE
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceec---CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCC--ceeee
Confidence 3588888888776 78899999998754333333 3478888886544 444443 357999999764332 23333
Q ss_pred ccc----cceeEEEEeeCCcEEEEee-------CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCC--C-CeEEE
Q psy18091 184 AHI----QDVKKVRFHPFDNILASAS-------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRI--G-SRLAT 249 (377)
Q Consensus 184 ~~~----~~v~~~~~~~~~~~l~s~s-------~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~~l~s 249 (377)
.|. ..|-..+.+++.++++..+ ..|.+.+|..++... +.+.+|-+....+..... . ..|.-
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-----Q~ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-----QPIEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-----EEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccc-----ceeeeeeeeeEEEecCCCCCCceEEEE
Confidence 332 2344555677777665433 236778888765432 345566544333222211 1 12332
Q ss_pred eeC---CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE-eec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 250 CSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 250 ~s~---D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
+.. .+.+++-++..+... .+.. .. +... .++ ...+.--..+..++.-+++..-..-|.+.+|+..+..
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~--~~~f-~k---k~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt 292 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTG--NQPF-PK---KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 292 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTT--CCCC-CC---EEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEecCCCcEEEEEEcCCCCCC--CCCc-cc---ccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCc
Confidence 222 257888876433100 0000 00 0010 011 1111122345555666788888999999999987654
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=62.83 E-value=70 Score=27.07 Aligned_cols=94 Identities=11% Similarity=0.041 Sum_probs=44.8
Q ss_pred cEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC----CC-------cEEEEEcCCCCceeEEEEeeccccc
Q psy18091 120 TTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR----DK-------SVWVWEVGEEDEYECAAVINAHIQD 188 (377)
Q Consensus 120 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~----dg-------~v~~wd~~~~~~~~~~~~~~~~~~~ 188 (377)
.+..||..+++... ..+..............++..++.|+. ++ .+..||..+.. +.....+......
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE-WVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE-EEECSCBSSCBCS
T ss_pred ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc-EEECCCCCccccc
Confidence 37889998887654 222221122223333456677777763 12 16778876542 2111111111111
Q ss_pred eeEEEEeeCCcEEEEeeCC-------CcEEEEecCc
Q psy18091 189 VKKVRFHPFDNILASASYD-------DTVKLFKEDK 217 (377)
Q Consensus 189 v~~~~~~~~~~~l~s~s~d-------g~i~~~~~~~ 217 (377)
...+. -++.+++.|+.+ ..+.+||...
T Consensus 103 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 136 (318)
T 2woz_A 103 FGLGE--VDDKIYVVAGKDLQTEASLDSVLCYDPVA 136 (318)
T ss_dssp CEEEE--ETTEEEEEEEEBTTTCCEEEEEEEEETTT
T ss_pred cceEE--ECCEEEEEcCccCCCCcccceEEEEeCCC
Confidence 11122 256777777754 2356677653
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.71 E-value=95 Score=27.29 Aligned_cols=188 Identities=10% Similarity=0.072 Sum_probs=82.7
Q ss_pred CCEEEEEECC--CCCEEEEEeCCC--cEEEeecccCCCcccceee---eecc-------CcCceeEEEECCC--CCEEEE
Q psy18091 51 GRVWNVSWNP--QGTMISSCGEDK--NIRLWGKESFGNKFTAKAI---LSDG-------HQRTIRETAWSPC--GNFIAS 114 (377)
Q Consensus 51 ~~V~~v~~~~--~g~~l~s~s~D~--~v~~W~~~~~~~~~~~~~~---~~~~-------h~~~V~~~~~~~~--~~~l~s 114 (377)
..|.+|+++| .+.+.+ ++..+ --.||.....+..+..... +... +...|.++++.|. ...+..
T Consensus 55 ~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4699999998 444444 44444 0123333332333322110 0000 1235778889872 455555
Q ss_pred EECCCcEEEEeCCCCceEEeEEec----------------CccCCEEEEEEcCC-CCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 115 ASFDATTAVWDKRSGQFECNATLE----------------GHENEVKSVTWSKN-GQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 115 ~s~d~~i~iwd~~~~~~~~~~~~~----------------~h~~~v~~l~~~~~-~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
+...+.|...+-............ .....+.++.+.|. ...+..+..++.|...+ .....+.
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~ 212 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWK 212 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCE
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCce
Confidence 555555544432222222211110 01235788999873 34444444444444332 1122222
Q ss_pred EEEE-eec-c--------ccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecccC--CcceEEEEEcCC
Q psy18091 178 CAAV-INA-H--------IQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLKSH--TSTVWSLAFDRI 243 (377)
Q Consensus 178 ~~~~-~~~-~--------~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~ 243 (377)
.... ... + ...+..+.++|.. ..+..+...+ |...+ .....|..+..-... ...+.+++++|.
T Consensus 213 ~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~--D~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 213 PLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD--RREGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp ECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE--TTTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC--CCCCcceECCCCCCCCCccceEEEEECCC
Confidence 1100 000 0 1247788898863 5555565544 33332 222234332210111 024567888763
No 340
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.94 E-value=1.3e+02 Score=29.32 Aligned_cols=30 Identities=7% Similarity=0.315 Sum_probs=23.9
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.|.++.+ +..++++-+.|.++|+|++++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3555544 46799999999999999998874
No 341
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.41 E-value=35 Score=34.65 Aligned_cols=32 Identities=13% Similarity=0.126 Sum_probs=25.5
Q ss_pred ceeEEEecCCCCceEEEeeCCCcEEEEecccCC
Q psy18091 344 DVNCVAWNPVVPGMLASCSDDGDVKLWQIKLEN 376 (377)
Q Consensus 344 ~v~~v~~~p~~~~~laS~s~Dg~i~iWd~~~~~ 376 (377)
.+.+++..+ +..++.+-+.|+++|+|++...+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCC
Confidence 466677776 45678899999999999998764
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=53.79 E-value=1.3e+02 Score=27.44 Aligned_cols=66 Identities=12% Similarity=0.155 Sum_probs=38.9
Q ss_pred ccceeEEEEeeCCc-EEEEeeCCCcEEEEecCccc--ccceeeee-cc-----cCCcceEEEEEcCC----CCeEEEee
Q psy18091 186 IQDVKKVRFHPFDN-ILASASYDDTVKLFKEDKAE--ADWINFAT-LK-----SHTSTVWSLAFDRI----GSRLATCS 251 (377)
Q Consensus 186 ~~~v~~~~~~~~~~-~l~s~s~dg~i~~~~~~~~~--~~~~~~~~-~~-----~h~~~v~~~~~~~~----~~~l~s~s 251 (377)
......|+|.|++. .++++...|.|++++..... .....+.. +. ........++|+|+ +.++++.+
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 34567889999985 45566778999999753221 11111111 11 11346788999996 55555544
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=51.71 E-value=64 Score=30.67 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=37.7
Q ss_pred eEEEECCCCCEEEEEECC------------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEE
Q psy18091 101 RETAWSPCGNFIASASFD------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159 (377)
Q Consensus 101 ~~~~~~~~~~~l~s~s~d------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~ 159 (377)
-.|.|+|.|++++.-..+ +.+.+.+..++++.....- .-..+++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEE
Confidence 468999999977654322 2344556667765433322 234689999999999876654
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=47.62 E-value=1.2e+02 Score=25.31 Aligned_cols=179 Identities=15% Similarity=0.130 Sum_probs=88.7
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-CCc
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~ 130 (377)
.|..|+-..+-..++ . ||.|..|-....+..-.... -...|..++-... +.+.-. |+.+..|-.. .++
T Consensus 64 ~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~-----~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gq 132 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAE-----ARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQ 132 (282)
T ss_dssp CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGG-----GSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTST
T ss_pred CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcc-----cCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCc
Confidence 455555554433333 3 89999997665443222111 1235666665433 333334 8999988543 233
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
+.. .......|..++.... +.+.-. ||.|+.|-.....++.. ...-...|..++...... ++. .||.+
T Consensus 133 lg~---~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~---p~~~~~~v~~i~~G~~hs-~al--~~G~v 200 (282)
T 3qhy_B 133 TTV---PAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV---PAEAQSGVDDVAGGIFHS-LAL--KDGKV 200 (282)
T ss_dssp TSC---CGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC---CGGGGSSEEEEEECSSEE-EEE--ETTEE
T ss_pred CCC---CccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC---ceecCCCeEEEEecCCEE-EEE--ECCeE
Confidence 211 1112345777665432 333334 79999997655433211 111123465555433222 333 58999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEe
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWK 260 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~ 260 (377)
..|-.......-.+ ......|..++-.......++ |+.+..|-
T Consensus 201 ~~wG~n~~gqlg~p----~~~~~~v~~i~~G~~h~~al~---~g~v~~wG 243 (282)
T 3qhy_B 201 IAWGDNRYKQTTVP----TEALSGVSAIASGEWYSLALK---NGKVIAWG 243 (282)
T ss_dssp EEEECCTTSTTCCC----GGGGSSCCEEEECSSCEEEEE---TTEEEEES
T ss_pred EEEECCCCCCCCCC----cccCCCceEEEcCCCEEEEEE---CCEEEEec
Confidence 99965432211001 111234666665543333333 89999994
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=46.95 E-value=1.5e+02 Score=26.00 Aligned_cols=184 Identities=11% Similarity=0.035 Sum_probs=81.9
Q ss_pred EEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECC--CCCEEEEEECCC----cEEEEeCCCCceEEeEE-
Q psy18091 64 MISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSP--CGNFIASASFDA----TTAVWDKRSGQFECNAT- 136 (377)
Q Consensus 64 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~~~l~s~s~d~----~i~iwd~~~~~~~~~~~- 136 (377)
.|..|...| +.+.+....+..+...... .....|.+++++| .+...+ +...+ .|...+-..........
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~--~~~~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPV--FLGHTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRP 99 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEE--STTSEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCcc--CCCCceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCcc
Confidence 566677766 4444433212233321111 1234689999998 444444 43344 34333211111221110
Q ss_pred --ecC--------ccCCEEEEEEcCC--CCEEEEEECCCcEEEEEcCCCCceeEEEEee----------------ccccc
Q psy18091 137 --LEG--------HENEVKSVTWSKN--GQFLATCSRDKSVWVWEVGEEDEYECAAVIN----------------AHIQD 188 (377)
Q Consensus 137 --~~~--------h~~~v~~l~~~~~--~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~----------------~~~~~ 188 (377)
+.. ....|.++++.|. ...+..+...+.|...+ .....+....... .....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 111 1125778999862 44555555555554432 1122222111000 01234
Q ss_pred eeEEEEeeC-CcEEEEeeCCCcEEEEecCcccccceeeee-ccc-C--------CcceEEEEEcCC-CCeEEEeeCCC
Q psy18091 189 VKKVRFHPF-DNILASASYDDTVKLFKEDKAEADWINFAT-LKS-H--------TSTVWSLAFDRI-GSRLATCSDDA 254 (377)
Q Consensus 189 v~~~~~~~~-~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~-~~~-h--------~~~v~~~~~~~~-~~~l~s~s~D~ 254 (377)
+..+.++|. .+.+..+..++.+... ......|..+.. ... + ...+.++.++|. ...+..+...+
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s--~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES--TDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE--SSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE--CCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 678888874 3444444444434333 222233433211 000 0 135889999986 34555555444
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=46.83 E-value=1.3e+02 Score=25.23 Aligned_cols=220 Identities=14% Similarity=0.116 Sum_probs=109.6
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEECCCCCEEEEEECCCcEEEEeCC-CCc
Q psy18091 52 RVWNVSWNPQGTMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAWSPCGNFIASASFDATTAVWDKR-SGQ 130 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~ 130 (377)
.|..|+....-.+++ . ||+|..|.....+..-... .....|..++-..... ++. . |+.+..|-.. .++
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~-----~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPA-----ATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCG-----GGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTST
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCc-----cCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCC
Confidence 455665554333333 4 8999999766544322111 1223566666543322 222 4 8999888543 232
Q ss_pred eEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeCCCcE
Q psy18091 131 FECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASYDDTV 210 (377)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg~i 210 (377)
+-.... -...|..++.... +.+.-. ||.|+.|-.....++.. .......|..++.......+ -. ||.+
T Consensus 94 lg~P~~---~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~---~~~~~~~i~~i~~G~~~~~~--l~-~G~v 161 (282)
T 3qhy_B 94 TTVPAE---ARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV---PAEAQSGVTALDGGVYTALA--VK-NGGV 161 (282)
T ss_dssp TCCCGG---GSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC---CGGGGSSEEEEEECSSEEEE--EE-TTEE
T ss_pred CCCCcc---cCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC---CccCCCCeEEEEcccCEEEE--EE-CCEE
Confidence 211111 1246777766433 444445 99999998655433211 11123345555443322222 23 7999
Q ss_pred EEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEeeCCCcEEEEeeeCCCCCCCCCCCCCCCcEEEEEeecCCCC
Q psy18091 211 KLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCSDDATVKIWKEYKPGNSAGIPTPDNDSVWKCVCTLSGHHG 290 (377)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
..|-....... .....-...|..++..... .++. .||.|..|-....++.. ++.+ ..
T Consensus 162 ~~wG~n~~gql----g~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg-~p~~---------------~~ 218 (282)
T 3qhy_B 162 IAWGDNYFGQT----TVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTT-VPTE---------------AL 218 (282)
T ss_dssp EEEECCTTSTT----SCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTC-CCGG---------------GG
T ss_pred EEecCCCCCCC----CCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCC-CCcc---------------cC
Confidence 98865432211 0011113457777655432 2333 59999999654443331 1110 01
Q ss_pred cceeEEEecccCCEEEEEeCCCcEEEEEeC
Q psy18091 291 RTIYDISWCHLTDLIATACGDDAIRIFKEN 320 (377)
Q Consensus 291 ~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~ 320 (377)
..|..++... ...++.. ||.+..|-..
T Consensus 219 ~~v~~i~~G~-~h~~al~--~g~v~~wG~n 245 (282)
T 3qhy_B 219 SGVSAIASGE-WYSLALK--NGKVIAWGSS 245 (282)
T ss_dssp SSCCEEEECS-SCEEEEE--TTEEEEESTT
T ss_pred CCceEEEcCC-CEEEEEE--CCEEEEecCC
Confidence 2355555433 2334443 8999999544
No 347
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=41.92 E-value=3.6e+02 Score=29.03 Aligned_cols=143 Identities=12% Similarity=0.167 Sum_probs=77.8
Q ss_pred CCcEEEeecccCCCcccceeeeeccC----cCceeEEEECCCCCEEEEEE-------CCCcEEEEeCCCCceEEeEEecC
Q psy18091 71 DKNIRLWGKESFGNKFTAKAILSDGH----QRTIRETAWSPCGNFIASAS-------FDATTAVWDKRSGQFECNATLEG 139 (377)
Q Consensus 71 D~~v~~W~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~~~ 139 (377)
+..|.-|+++. ... ...+ .+.| ...|....-+++.++++..| ..|.+.+|..+.+. .+.++|
T Consensus 124 ~~aVyHW~~~~--~s~-P~k~-fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~---sQ~ieg 196 (1630)
T 1xi4_A 124 DNAVYHWSMEG--ESQ-PVKM-FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEG 196 (1630)
T ss_pred CCeEEEeccCC--CCc-cHHH-HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc---chhhhH
Confidence 35688898852 111 1101 1222 45688888889988766433 35788888876543 234566
Q ss_pred ccCCEEEEEEc--CCCCEEEE-EEC---CCcEEEEEcCCC----CceeE--EEE-e--eccccceeEEEEeeCCcEEEEe
Q psy18091 140 HENEVKSVTWS--KNGQFLAT-CSR---DKSVWVWEVGEE----DEYEC--AAV-I--NAHIQDVKKVRFHPFDNILASA 204 (377)
Q Consensus 140 h~~~v~~l~~~--~~~~~l~s-~~~---dg~v~~wd~~~~----~~~~~--~~~-~--~~~~~~v~~~~~~~~~~~l~s~ 204 (377)
|......+... +....+++ +.. .+.+.+-++... ..+.. ... + ....+....+..++....+..-
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~i 276 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 276 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEE
Confidence 65443333221 11112222 111 267888887543 11100 000 0 1112234457778877888888
Q ss_pred eCCCcEEEEecCcccc
Q psy18091 205 SYDDTVKLFKEDKAEA 220 (377)
Q Consensus 205 s~dg~i~~~~~~~~~~ 220 (377)
+.-|.+.+||+.+...
T Consensus 277 tk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 277 TKYGYIHLYDLETGTC 292 (1630)
T ss_pred ecCceEEEEecccchh
Confidence 8999999999986543
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=40.90 E-value=31 Score=30.18 Aligned_cols=111 Identities=5% Similarity=-0.022 Sum_probs=58.9
Q ss_pred CEEEEEeCCCcEEEeecccCCCcccceeeeeccCcCceeEEEE--CC-CCCEEEEE-ECCCcEEEEeCCCCceEEeEEec
Q psy18091 63 TMISSCGEDKNIRLWGKESFGNKFTAKAILSDGHQRTIRETAW--SP-CGNFIASA-SFDATTAVWDKRSGQFECNATLE 138 (377)
Q Consensus 63 ~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~~-~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~ 138 (377)
.+++.++.||.|.-.|.+++...+..+. ....++....- .+ ++..++.. ..||.+..++..+|..+......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~----~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEP----ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECG----GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC----CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 4677888889888888765332332211 11111111110 01 22333333 57999999998887544332222
Q ss_pred C--ccCCEEEE---EE-c----CCCCEEEEEECCCcEEEEEcCCCCcee
Q psy18091 139 G--HENEVKSV---TW-S----KNGQFLATCSRDKSVWVWEVGEEDEYE 177 (377)
Q Consensus 139 ~--h~~~v~~l---~~-~----~~~~~l~s~~~dg~v~~wd~~~~~~~~ 177 (377)
. ...++..- .. . ..+..+++|+.+|.+...|.+++....
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 1 11222210 00 0 135578899999999999988876543
No 349
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=40.60 E-value=2.2e+02 Score=26.12 Aligned_cols=201 Identities=12% Similarity=0.169 Sum_probs=111.2
Q ss_pred EECCCCCEEEEEECCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEECCCcEEEEEcCCCCceeEEEEee
Q psy18091 104 AWSPCGNFIASASFDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSRDKSVWVWEVGEEDEYECAAVIN 183 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 183 (377)
-.+|..+.||.-+ ...+.|||+++........+. ..|..-.|-.+. .|+-. .+..|+.|++...... ...++
T Consensus 72 IMnP~~~iiALra-g~~lQiFnle~K~klks~~~~---e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~s~P--~kvFd 143 (494)
T 1bpo_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLN-TVALV-TDNAVYHWSMEGESQP--VKMFD 143 (494)
T ss_dssp EECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS---SCCCEEEEEETT-EEEEE-CSSEEEEEESSSSCCC--EEEEE
T ss_pred eeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC---CCceEEEecCCC-eEEEE-cCCeeEEecccCCCCc--hhhee
Confidence 4688888888766 789999999987543333332 467777776443 44444 3468999999764322 23343
Q ss_pred ccc----cceeEEEEeeCCcEEEEee-------CCCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC---CeEEE
Q psy18091 184 AHI----QDVKKVRFHPFDNILASAS-------YDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG---SRLAT 249 (377)
Q Consensus 184 ~~~----~~v~~~~~~~~~~~l~s~s-------~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s 249 (377)
.|. ..|-....+++.++++..+ ..|.+.+|..++... +.+.+|-+....+...... ..|.-
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-----Q~ieGhaa~F~~~~~~g~~~~~~lf~f 218 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-----QPIEGHAASFAQFKMEGNAEESTLFCF 218 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-----EEECCSEEEEEEEECTTCSSEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-----chheeeeeeeEEEecCCCCCCceEEEE
Confidence 332 2355556677777765433 246788898765432 3455665544433332111 12333
Q ss_pred eeC---CCcEEEEeeeCCCCCCCCCCCCCCCcEEEEE-eec-CCCCcceeEEEecccCCEEEEEeCCCcEEEEEeCCCC
Q psy18091 250 CSD---DATVKIWKEYKPGNSAGIPTPDNDSVWKCVC-TLS-GHHGRTIYDISWCHLTDLIATACGDDAIRIFKENPEA 323 (377)
Q Consensus 250 ~s~---D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~~~~~~~ 323 (377)
+.. .+.+++-++..+.... +.. .. +... .++ ...+.--..+..++.-+++..-..-|.+.+|+..+..
T Consensus 219 a~r~~~g~kLhi~Ei~~~~~~~--~~f-~k---k~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 219 AVRGQAGGKLHIIEVGTPPTGN--QPF-PK---KAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp EECSTTCCEEEEEECSCCCTTC--CCC-CC---EEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEecCCCcEEEEEEcCCCccCC--CCc-cc---eeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 333 2688888764431100 000 00 0000 000 0111122345555666788888999999999987654
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=40.45 E-value=2.2e+02 Score=26.11 Aligned_cols=120 Identities=10% Similarity=0.142 Sum_probs=72.9
Q ss_pred CceeEEEECCCCCEEEEEE-------CCCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCC---CEEEEEECC---Cc
Q psy18091 98 RTIRETAWSPCGNFIASAS-------FDATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNG---QFLATCSRD---KS 164 (377)
Q Consensus 98 ~~V~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~---~~l~s~~~d---g~ 164 (377)
..|.....+++.++++..+ ..|.+.+|..+.+. .+.+++|....-.+...-+. ..|..+... +.
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~---sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC---EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc---cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 5677888899999876433 24778899887654 34677776544333332111 123333332 67
Q ss_pred EEEEEcCCC----CceeE--EEEe---eccccceeEEEEeeCCcEEEEeeCCCcEEEEecCcccc
Q psy18091 165 VWVWEVGEE----DEYEC--AAVI---NAHIQDVKKVRFHPFDNILASASYDDTVKLFKEDKAEA 220 (377)
Q Consensus 165 v~~wd~~~~----~~~~~--~~~~---~~~~~~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~ 220 (377)
+.+-++... ..+.. .... +...+....+..++....+..-+.-|.+.+||+.....
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEeccccee
Confidence 888888543 11111 0100 11233355678888888888999999999999987654
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=39.92 E-value=55 Score=33.25 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=29.5
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
.+.+++..++..++++-+.|+++|+|++.+++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46677777888899999999999999999987543
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=38.24 E-value=1.8e+02 Score=28.39 Aligned_cols=36 Identities=11% Similarity=0.209 Sum_probs=26.9
Q ss_pred eeEEEECCCCCEEEEEECCCcEEEEeCCCCceEEeEEe
Q psy18091 100 IRETAWSPCGNFIASASFDATTAVWDKRSGQFECNATL 137 (377)
Q Consensus 100 V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 137 (377)
|.++.+ +..++++-+.|.++|+|++.+++......+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444333 467999999999999999999875544444
No 353
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=35.90 E-value=62 Score=30.63 Aligned_cols=109 Identities=12% Similarity=0.165 Sum_probs=62.3
Q ss_pred CEEEEEECCCCCEEE-EEeCCCcEEEeecccCCC----cc-cce-eee-eccCcCceeEEEECCCCCEEEEEECCCcEEE
Q psy18091 52 RVWNVSWNPQGTMIS-SCGEDKNIRLWGKESFGN----KF-TAK-AIL-SDGHQRTIRETAWSPCGNFIASASFDATTAV 123 (377)
Q Consensus 52 ~V~~v~~~~~g~~l~-s~s~D~~v~~W~~~~~~~----~~-~~~-~~~-~~~h~~~V~~~~~~~~~~~l~s~s~d~~i~i 123 (377)
.-..+..+|||++++ +|-.+.++.+++.++... +. ..+ .+. ...-.-.-.-++|.++|.-..|.--|..|.-
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 456788999999865 555788999999874211 11 000 000 0001123456789999955556667999999
Q ss_pred EeCCCC------ce--EEeEEecCccCCEEEEEE------cCCCCEEEEEEC
Q psy18091 124 WDKRSG------QF--ECNATLEGHENEVKSVTW------SKNGQFLATCSR 161 (377)
Q Consensus 124 wd~~~~------~~--~~~~~~~~h~~~v~~l~~------~~~~~~l~s~~~ 161 (377)
|++... +- .....+.-|-.+- .+.- .|+|++|++...
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEES
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEecc
Confidence 997532 10 1222333332222 2222 468889888753
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=34.81 E-value=1.8e+02 Score=27.54 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=38.5
Q ss_pred ceeEEEECCCCCEEEEEEC------------CCcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEE
Q psy18091 99 TIRETAWSPCGNFIASASF------------DATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATC 159 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~------------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~ 159 (377)
.-..+.|+++|.+.+.... .+.+..++..++++..... .....+++.++|+||++.|+..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEE
Confidence 3457899999987763321 1145556676777653322 1123568999999999887665
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=31.33 E-value=51 Score=34.28 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=28.5
Q ss_pred ceeEEEECCCCCEEEEEECCCcEEEEeCCCCceEE
Q psy18091 99 TIRETAWSPCGNFIASASFDATTAVWDKRSGQFEC 133 (377)
Q Consensus 99 ~V~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 133 (377)
.+.+++..++..++++-+.|+++|+|++.+++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 44556666788899999999999999999987543
No 356
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=29.12 E-value=2.6e+02 Score=23.60 Aligned_cols=125 Identities=10% Similarity=0.125 Sum_probs=63.7
Q ss_pred EECCCCCEEEEEE--CCCcEEEE--eCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEEC-CCcEEEEEcCCCCceeE
Q psy18091 104 AWSPCGNFIASAS--FDATTAVW--DKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCSR-DKSVWVWEVGEEDEYEC 178 (377)
Q Consensus 104 ~~~~~~~~l~s~s--~d~~i~iw--d~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~~-dg~v~~wd~~~~~~~~~ 178 (377)
.|++++++|+-.. .++.-.|| ++.....+ .+..+.. .+++|+++.|+-.+. ...|..-++......
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~---~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-- 180 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK---KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-- 180 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCE---EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE--
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeE---EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE--
Confidence 5778888887665 34444444 55543322 2222222 345677877665544 567777776654321
Q ss_pred EEEeeccccceeEEEEeeCCcEEEEeeCCC--cEEEEecCcccccceeeeecccCCcceEEEEEcCCCCeEEEee
Q psy18091 179 AAVINAHIQDVKKVRFHPFDNILASASYDD--TVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIGSRLATCS 251 (377)
Q Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~dg--~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 251 (377)
..... ... ..++|.+.+|+-...++ .|..-++..... ..+.. ..+ ..|+|.+.+|.-++
T Consensus 181 -~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-----~~Lt~--~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 181 -LFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-----VVLTE--ANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp -EEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-----EECSC--SCE--EEEEEETTEEEEEE
T ss_pred -EEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-----EEEeC--CCc--ceEEECCCEEEEEE
Confidence 12221 122 23568888877665543 344444443322 11211 122 23677787776543
No 357
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=26.03 E-value=2.2e+02 Score=21.75 Aligned_cols=51 Identities=10% Similarity=0.429 Sum_probs=32.6
Q ss_pred ceeEEEEeeCCcEEEEeeCCCcEEEEecCcccccceeeeecccCCcceEEEEE
Q psy18091 188 DVKKVRFHPFDNILASASYDDTVKLFKEDKAEADWINFATLKSHTSTVWSLAF 240 (377)
Q Consensus 188 ~v~~~~~~~~~~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 240 (377)
.+.-+.|.|.+.+.+.+...| +.-++.-.+..|..+-.-.+..-.|+.+.|
T Consensus 111 GlEp~eF~p~~~w~a~~~esG--~f~dvDLse~eW~DYDEk~~~~VsI~e~~~ 161 (164)
T 1zso_A 111 GIELIDFFPSNNFIVEDTKGK--LYYDVNLSDQNWCDYNEEHEMCVGIYNLEY 161 (164)
T ss_dssp SEEEEEECCCSCEEEEETTSC--EEEEECCTTSCEEEEETTTTEEEEEEEEEE
T ss_pred CeeeEEEecCCcEEEEECCCC--cEEeeecCCCceeccccCCCCeEEEEEEEE
Confidence 355678999999999997777 443433334457666544445555665554
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.26 E-value=59 Score=33.77 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=26.1
Q ss_pred CEEEEEEcCCCCEEEEEECCCcEEEEEcCCCC
Q psy18091 143 EVKSVTWSKNGQFLATCSRDKSVWVWEVGEED 174 (377)
Q Consensus 143 ~v~~l~~~~~~~~l~s~~~dg~v~~wd~~~~~ 174 (377)
.+.+++..++..++++-+.|+++|+|++.++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 34455666788899999999999999998874
No 359
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=24.85 E-value=5e+02 Score=25.45 Aligned_cols=154 Identities=10% Similarity=0.138 Sum_probs=74.1
Q ss_pred cCceeEEEECCC-CCEEEEEECCCcEEEEeCCCCceEEeEEecC----ccCCEEEEEEcCCC-CEEEEEECCCc----EE
Q psy18091 97 QRTIRETAWSPC-GNFIASASFDATTAVWDKRSGQFECNATLEG----HENEVKSVTWSKNG-QFLATCSRDKS----VW 166 (377)
Q Consensus 97 ~~~V~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~----h~~~v~~l~~~~~~-~~l~s~~~dg~----v~ 166 (377)
...|.+++++|. ...+..+...+.|...+-............. ....+.++++.|.. ..++.+..+.. -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 357999999995 4556666666666554422222322110000 12469999999843 34444443311 23
Q ss_pred EEEcCC-CCceeEEEEeecc-------ccceeEEEEeeCC-cEEEEeeCCCcEEEEecCcccccceeeeecc---cCCcc
Q psy18091 167 VWEVGE-EDEYECAAVINAH-------IQDVKKVRFHPFD-NILASASYDDTVKLFKEDKAEADWINFATLK---SHTST 234 (377)
Q Consensus 167 ~wd~~~-~~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~s~s~dg~i~~~~~~~~~~~~~~~~~~~---~h~~~ 234 (377)
+|.-.. ...+.... .... ...+..++++|.. +.+..+...+. +|........|..+.... .....
T Consensus 94 v~~S~DgG~TW~~~~-~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYE-SPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEE-CSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceecc-CCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCC
Confidence 343332 33332221 1100 0134567888754 44445543333 343333333455433211 11245
Q ss_pred eEEEEEcCC-CCeEEEeeCC
Q psy18091 235 VWSLAFDRI-GSRLATCSDD 253 (377)
Q Consensus 235 v~~~~~~~~-~~~l~s~s~D 253 (377)
+..+.++|. +..+..+..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 788899885 3355555544
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=24.69 E-value=3.2e+02 Score=23.07 Aligned_cols=134 Identities=7% Similarity=0.050 Sum_probs=66.9
Q ss_pred EECCCCCEEEEEECC--------------CcEEEEeCCCCceEEeEEecCccCCEEEEEEcCCCCEEEEEE--CCCc--E
Q psy18091 104 AWSPCGNFIASASFD--------------ATTAVWDKRSGQFECNATLEGHENEVKSVTWSKNGQFLATCS--RDKS--V 165 (377)
Q Consensus 104 ~~~~~~~~l~s~s~d--------------~~i~iwd~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~~--~dg~--v 165 (377)
-+++++++|.-+... ..|+..++..++.... .. .. +..|++++++++-.. .++. |
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l---~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVL---DP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEE---EC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEe---ec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 457888887766543 3566667766543322 11 12 236777888877665 3444 4
Q ss_pred EEEEcCCCCceeEEEEeeccccceeEEEEeeCCcEEEEeeC-CCcEEEEecCcccccceeeeecccCCcceEEEEEcCCC
Q psy18091 166 WVWEVGEEDEYECAAVINAHIQDVKKVRFHPFDNILASASY-DDTVKLFKEDKAEADWINFATLKSHTSTVWSLAFDRIG 244 (377)
Q Consensus 166 ~~wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-dg~i~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 244 (377)
..-++...... .+..+. + ..++|.++.|.-.+. ...|...++...... .+ +. .... ..+.|++
T Consensus 132 y~~~~dGs~~~----~lt~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~--~l--~~---~~~~-~~~~P~g 195 (302)
T 3s25_A 132 YRIRIDGEEKK----KIKNHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA--LF--YD---CNCY-KPVVLDD 195 (302)
T ss_dssp EEEETTSCCCE----EEESSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEE--EE--EC---SCEE-EEEEEET
T ss_pred EEEECCCCCeE----EEeCCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEE--EE--eC---CCcc-ceeeecC
Confidence 44444433211 122221 1 345777776664444 566777666544321 11 11 1111 2355888
Q ss_pred CeEEEeeCCCcEEEEe
Q psy18091 245 SRLATCSDDATVKIWK 260 (377)
Q Consensus 245 ~~l~s~s~D~~i~iw~ 260 (377)
.+|+-...++.-+|+.
T Consensus 196 ~~iy~t~~~~~~~I~~ 211 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVH 211 (302)
T ss_dssp TEEEEEEGGGTTEEEE
T ss_pred CEEEEEEcCCCcEEEE
Confidence 8776444332234443
Done!